Query 007130
Match_columns 617
No_of_seqs 216 out of 1646
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 19:20:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007130.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007130hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 6.8E-48 1.5E-52 442.4 27.8 332 275-615 479-827 (977)
2 PRK14098 glycogen synthase; Pr 100.0 1.9E-45 4.1E-50 409.3 24.9 332 274-616 2-355 (489)
3 PRK14099 glycogen synthase; Pr 100.0 3E-45 6.4E-50 407.3 24.2 324 276-616 2-343 (485)
4 TIGR02095 glgA glycogen/starch 100.0 3.6E-43 7.7E-48 389.4 25.7 325 278-616 1-339 (473)
5 PRK00654 glgA glycogen synthas 100.0 9.2E-42 2E-46 377.8 25.1 319 278-615 1-329 (466)
6 PLN02316 synthase/transferase 100.0 5.6E-40 1.2E-44 383.2 29.9 294 275-615 585-888 (1036)
7 COG0297 GlgA Glycogen synthase 100.0 1.4E-40 3E-45 364.9 21.5 327 278-617 1-343 (487)
8 cd03791 GT1_Glycogen_synthase_ 100.0 2.7E-39 5.9E-44 357.6 26.2 327 279-616 1-344 (476)
9 PF08323 Glyco_transf_5: Starc 100.0 7.2E-32 1.6E-36 275.0 7.7 221 279-506 1-244 (245)
10 TIGR02094 more_P_ylases alpha- 100.0 1.6E-27 3.5E-32 269.5 18.4 330 280-616 1-449 (601)
11 cd04299 GT1_Glycogen_Phosphory 99.9 4.1E-23 8.8E-28 237.9 19.1 330 278-610 86-526 (778)
12 PRK10307 putative glycosyl tra 99.9 6.5E-22 1.4E-26 215.1 21.0 268 278-616 1-280 (412)
13 TIGR02149 glgA_Coryne glycogen 99.9 4.1E-21 8.9E-26 205.6 22.3 239 278-607 1-239 (388)
14 PLN02871 UDP-sulfoquinovose:DA 99.9 2.7E-20 5.8E-25 206.4 25.9 241 275-607 56-300 (465)
15 cd03796 GT1_PIG-A_like This fa 99.9 1.5E-20 3.2E-25 203.8 21.0 239 279-616 1-245 (398)
16 TIGR03449 mycothiol_MshA UDP-N 99.9 1.3E-20 2.7E-25 203.8 17.7 248 280-605 1-260 (405)
17 TIGR02472 sucr_P_syn_N sucrose 99.8 3.9E-20 8.4E-25 203.7 21.0 259 292-607 24-290 (439)
18 cd04962 GT1_like_5 This family 99.8 9.4E-20 2E-24 193.2 21.0 236 278-607 1-237 (371)
19 TIGR02470 sucr_synth sucrose s 99.8 2E-19 4.3E-24 207.1 20.1 293 277-607 255-591 (784)
20 TIGR02468 sucrsPsyn_pln sucros 99.8 7.4E-19 1.6E-23 206.2 21.5 303 276-607 168-521 (1050)
21 PLN02846 digalactosyldiacylgly 99.8 1E-18 2.2E-23 192.2 20.4 270 276-616 3-280 (462)
22 KOG1111 N-acetylglucosaminyltr 99.8 6.6E-19 1.4E-23 182.1 13.2 242 278-617 1-248 (426)
23 cd04955 GT1_like_6 This family 99.8 1.8E-17 4E-22 174.4 21.6 239 279-615 1-241 (363)
24 cd03805 GT1_ALG2_like This fam 99.8 3.4E-18 7.4E-23 183.3 14.8 246 278-608 1-256 (392)
25 cd04951 GT1_WbdM_like This fam 99.8 2.2E-17 4.8E-22 173.3 20.6 235 279-615 1-239 (360)
26 cd03819 GT1_WavL_like This fam 99.8 1.9E-17 4E-22 174.0 19.8 218 292-608 8-227 (355)
27 cd03812 GT1_CapH_like This fam 99.8 2.2E-17 4.8E-22 173.7 19.9 238 279-615 1-243 (358)
28 cd03800 GT1_Sucrose_synthase T 99.8 2.3E-17 4.9E-22 176.1 19.4 252 279-608 1-262 (398)
29 PRK15484 lipopolysaccharide 1, 99.8 2E-17 4.4E-22 178.8 18.1 225 278-607 3-234 (380)
30 cd03795 GT1_like_4 This family 99.8 1.3E-16 2.7E-21 167.4 23.3 228 279-607 1-228 (357)
31 TIGR03088 stp2 sugar transfera 99.8 3.5E-17 7.6E-22 174.9 19.3 240 278-616 2-250 (374)
32 cd03802 GT1_AviGT4_like This f 99.7 2.9E-17 6.2E-22 171.2 18.1 205 278-607 1-207 (335)
33 PRK10125 putative glycosyl tra 99.7 1.1E-17 2.3E-22 182.8 15.4 265 278-608 1-282 (405)
34 cd03816 GT1_ALG1_like This fam 99.7 3.2E-17 7E-22 179.3 16.8 256 278-616 4-290 (415)
35 PRK15427 colanic acid biosynth 99.7 9.2E-17 2E-21 175.4 18.5 257 278-616 1-274 (406)
36 cd03792 GT1_Trehalose_phosphor 99.7 4.4E-17 9.5E-22 174.7 15.3 229 279-608 1-232 (372)
37 cd03821 GT1_Bme6_like This fam 99.7 2.3E-16 4.9E-21 164.0 19.5 248 279-613 1-250 (375)
38 PLN00142 sucrose synthase 99.7 7.1E-17 1.5E-21 186.3 16.2 294 277-606 279-613 (815)
39 cd03817 GT1_UGDG_like This fam 99.7 5.8E-16 1.3E-20 161.2 19.6 239 279-607 1-243 (374)
40 cd03807 GT1_WbnK_like This fam 99.7 4.5E-16 9.8E-21 161.1 18.3 233 279-608 1-235 (365)
41 cd03818 GT1_ExpC_like This fam 99.7 5.8E-16 1.3E-20 167.7 19.8 240 279-606 1-252 (396)
42 cd03793 GT1_Glycogen_synthase_ 99.7 9.3E-17 2E-21 178.4 13.6 273 283-595 7-326 (590)
43 cd03794 GT1_wbuB_like This fam 99.7 9.1E-16 2E-20 159.9 19.0 255 279-607 1-260 (394)
44 cd03823 GT1_ExpE7_like This fa 99.7 1.2E-15 2.5E-20 158.6 18.6 233 279-610 1-233 (359)
45 cd03814 GT1_like_2 This family 99.7 1.4E-15 3.1E-20 158.5 19.3 236 279-608 1-238 (364)
46 PRK09922 UDP-D-galactose:(gluc 99.7 7.3E-16 1.6E-20 164.9 17.4 225 278-616 1-231 (359)
47 cd03822 GT1_ecORF704_like This 99.7 5.7E-15 1.2E-19 154.4 21.4 225 279-608 1-227 (366)
48 cd05844 GT1_like_7 Glycosyltra 99.7 2.2E-15 4.7E-20 159.6 18.4 234 279-615 1-239 (367)
49 PRK15179 Vi polysaccharide bio 99.7 2.4E-15 5.3E-20 173.2 19.6 168 388-616 395-569 (694)
50 cd03825 GT1_wcfI_like This fam 99.7 6.9E-15 1.5E-19 154.7 21.1 227 278-610 1-238 (365)
51 cd03809 GT1_mtfB_like This fam 99.6 2.1E-15 4.7E-20 157.5 15.9 239 279-612 1-241 (365)
52 cd03801 GT1_YqgM_like This fam 99.6 1.1E-14 2.4E-19 149.6 20.9 238 279-607 1-240 (374)
53 cd03799 GT1_amsK_like This is 99.6 6.6E-15 1.4E-19 154.2 18.8 218 279-607 1-220 (355)
54 cd03811 GT1_WabH_like This fam 99.6 1.6E-14 3.5E-19 148.2 19.3 235 279-615 1-240 (353)
55 cd03820 GT1_amsD_like This fam 99.6 3.8E-14 8.2E-19 145.4 21.8 216 279-607 1-219 (348)
56 PLN02275 transferase, transfer 99.6 1.8E-14 4E-19 155.3 17.3 237 293-616 14-282 (371)
57 cd03798 GT1_wlbH_like This fam 99.6 1.7E-13 3.8E-18 141.6 21.9 236 280-607 1-243 (377)
58 cd03808 GT1_cap1E_like This fa 99.6 2.3E-13 5E-18 140.2 19.8 228 279-608 1-230 (359)
59 PRK00726 murG undecaprenyldiph 99.6 6.3E-14 1.4E-18 149.5 15.9 218 277-607 1-223 (357)
60 PF13579 Glyco_trans_4_4: Glyc 99.5 3.8E-14 8.3E-19 131.0 10.1 158 294-518 1-160 (160)
61 cd03806 GT1_ALG11_like This fa 99.5 1E-13 2.2E-18 152.2 13.3 247 288-607 7-283 (419)
62 PLN02501 digalactosyldiacylgly 99.5 1.3E-13 2.8E-18 155.3 13.2 260 278-616 323-598 (794)
63 PF13439 Glyco_transf_4: Glyco 99.5 2.2E-14 4.7E-19 134.9 5.9 175 280-525 1-177 (177)
64 TIGR03087 stp1 sugar transfera 99.5 1E-13 2.2E-18 150.4 11.2 256 280-609 1-271 (397)
65 PRK15490 Vi polysaccharide bio 99.5 5.2E-13 1.1E-17 148.7 16.5 163 387-616 274-450 (578)
66 cd03785 GT1_MurG MurG is an N- 99.4 8.5E-13 1.8E-17 139.7 14.0 224 279-615 1-231 (350)
67 cd03813 GT1_like_3 This family 99.4 3.1E-13 6.7E-18 150.6 9.8 167 392-614 172-343 (475)
68 TIGR01133 murG undecaprenyldip 99.4 3E-12 6.4E-17 135.5 16.2 224 278-615 1-229 (348)
69 PLN02949 transferase, transfer 99.3 5.1E-11 1.1E-15 132.5 17.7 95 470-607 213-313 (463)
70 cd03804 GT1_wbaZ_like This fam 99.3 2.9E-11 6.3E-16 128.2 14.0 87 470-608 146-232 (351)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.2 1.5E-11 3.2E-16 136.7 5.8 165 393-606 131-308 (460)
72 PRK13609 diacylglycerol glucos 99.1 2.8E-10 6.1E-15 122.7 12.7 226 276-605 3-238 (380)
73 PF05693 Glycogen_syn: Glycoge 99.1 1.6E-10 3.4E-15 128.6 8.1 274 283-594 2-320 (633)
74 TIGR02918 accessory Sec system 99.1 1.5E-09 3.3E-14 121.8 14.5 159 391-616 209-371 (500)
75 TIGR02400 trehalose_OtsA alpha 99.0 1.6E-09 3.5E-14 120.3 13.1 162 394-604 128-301 (456)
76 PF09314 DUF1972: Domain of un 99.0 3E-09 6.4E-14 103.9 13.1 180 278-520 2-185 (185)
77 cd04946 GT1_AmsK_like This fam 99.0 6.4E-09 1.4E-13 113.8 17.0 101 470-614 176-282 (407)
78 PHA01630 putative group 1 glyc 99.0 3.9E-09 8.4E-14 112.7 13.0 96 470-608 86-184 (331)
79 PHA01633 putative glycosyl tra 99.0 3E-08 6.6E-13 105.7 19.1 99 473-606 88-192 (335)
80 PLN02605 monogalactosyldiacylg 98.9 6E-09 1.3E-13 112.9 12.9 150 388-607 95-252 (382)
81 PRK05749 3-deoxy-D-manno-octul 98.9 1.6E-08 3.5E-13 110.8 15.5 161 388-616 119-284 (425)
82 cd04949 GT1_gtfA_like This fam 98.9 2.6E-08 5.5E-13 106.4 14.5 147 392-608 98-246 (372)
83 PLN03063 alpha,alpha-trehalose 98.7 6.9E-08 1.5E-12 114.0 12.2 152 395-595 149-306 (797)
84 PRK14501 putative bifunctional 98.7 7.2E-08 1.6E-12 113.2 12.3 163 394-605 134-308 (726)
85 cd03786 GT1_UDP-GlcNAc_2-Epime 98.7 8.6E-08 1.9E-12 102.2 11.4 163 388-616 83-252 (363)
86 PF13477 Glyco_trans_4_2: Glyc 98.7 1.4E-07 3E-12 86.8 10.8 138 279-485 1-139 (139)
87 TIGR02398 gluc_glyc_Psyn gluco 98.6 2.3E-07 5.1E-12 103.4 13.2 165 394-607 133-330 (487)
88 cd01635 Glycosyltransferase_GT 98.6 5.9E-07 1.3E-11 87.2 13.7 37 573-609 109-147 (229)
89 cd04950 GT1_like_1 Glycosyltra 98.5 1.9E-06 4.1E-11 93.1 14.4 97 469-606 145-241 (373)
90 PRK00025 lpxB lipid-A-disaccha 98.4 6.4E-07 1.4E-11 96.4 8.5 146 387-606 79-229 (380)
91 TIGR00236 wecB UDP-N-acetylglu 98.4 1.7E-06 3.6E-11 93.0 10.4 154 388-608 81-241 (365)
92 PRK13608 diacylglycerol glucos 98.3 4.7E-06 1E-10 90.8 13.0 96 475-607 145-242 (391)
93 PRK09814 beta-1,6-galactofuran 98.3 8.4E-06 1.8E-10 86.9 13.5 137 391-608 61-201 (333)
94 TIGR00215 lpxB lipid-A-disacch 98.0 2.4E-05 5.1E-10 85.4 9.0 146 387-605 83-233 (385)
95 PLN03064 alpha,alpha-trehalose 97.9 7.6E-05 1.7E-09 88.9 11.5 152 395-595 233-390 (934)
96 PRK12446 undecaprenyldiphospho 97.7 0.00083 1.8E-08 72.5 15.7 30 293-322 11-40 (352)
97 COG0058 GlgP Glucan phosphoryl 97.7 3.3E-05 7.1E-10 89.0 5.0 315 289-609 111-535 (750)
98 cd04300 GT1_Glycogen_Phosphory 97.3 0.00023 4.9E-09 83.2 5.4 213 393-610 300-582 (797)
99 KOG3742 Glycogen synthase [Car 97.3 8.6E-05 1.9E-09 79.9 1.2 161 395-594 176-351 (692)
100 PRK14986 glycogen phosphorylas 97.2 0.00033 7.3E-09 81.8 4.8 213 393-610 313-595 (815)
101 PF00534 Glycos_transf_1: Glyc 97.2 0.00086 1.9E-08 63.5 6.7 52 554-607 3-57 (172)
102 KOG1387 Glycosyltransferase [C 97.1 0.0078 1.7E-07 63.6 13.5 92 472-607 217-315 (465)
103 KOG2941 Beta-1,4-mannosyltrans 97.1 0.0061 1.3E-07 64.4 12.2 191 391-617 101-315 (444)
104 PF00343 Phosphorylase: Carboh 97.0 0.0021 4.6E-08 74.3 8.5 211 395-610 216-496 (713)
105 TIGR02093 P_ylase glycogen/sta 97.0 0.00035 7.6E-09 81.4 2.3 213 393-610 297-579 (794)
106 PRK10117 trehalose-6-phosphate 97.0 0.006 1.3E-07 68.1 11.8 162 395-606 125-299 (474)
107 PLN02205 alpha,alpha-trehalose 96.8 0.006 1.3E-07 73.0 11.3 174 385-605 191-382 (854)
108 COG0380 OtsA Trehalose-6-phosp 96.8 0.011 2.3E-07 66.1 12.3 166 394-607 148-327 (486)
109 PRK14985 maltodextrin phosphor 96.6 0.00058 1.2E-08 79.6 0.1 213 393-610 302-581 (798)
110 PF00982 Glyco_transf_20: Glyc 96.3 0.015 3.2E-07 65.3 9.5 166 393-606 141-320 (474)
111 PF00862 Sucrose_synth: Sucros 96.3 0.004 8.7E-08 68.9 4.7 114 391-529 399-516 (550)
112 COG0438 RfaG Glycosyltransfera 96.3 0.048 1E-06 54.8 12.0 90 477-608 150-241 (381)
113 PF11997 DUF3492: Domain of un 95.8 0.02 4.4E-07 59.5 6.7 42 278-320 1-42 (268)
114 PF12000 Glyco_trans_4_3: Gkyc 95.7 0.033 7.1E-07 54.1 7.2 41 472-524 130-170 (171)
115 COG0707 MurG UDP-N-acetylgluco 95.5 0.31 6.8E-06 52.8 14.7 118 278-433 1-124 (357)
116 KOG0853 Glycosyltransferase [C 95.4 0.1 2.2E-06 58.4 10.8 105 474-605 206-317 (495)
117 PF04007 DUF354: Protein of un 95.3 0.051 1.1E-06 58.3 7.9 39 278-323 1-39 (335)
118 PF13692 Glyco_trans_1_4: Glyc 94.8 0.018 4E-07 52.1 2.6 42 568-609 2-46 (135)
119 COG1817 Uncharacterized protei 86.2 4.1 8.9E-05 43.2 9.2 41 278-325 1-41 (346)
120 PF08288 PIGA: PIGA (GPI ancho 86.1 0.8 1.7E-05 39.5 3.3 72 351-433 12-85 (90)
121 PF01975 SurE: Survival protei 81.5 1.9 4E-05 42.9 4.3 39 278-323 1-39 (196)
122 cd03784 GT1_Gtf_like This fami 78.1 3.3 7.2E-05 44.8 5.3 38 278-321 1-38 (401)
123 PF02350 Epimerase_2: UDP-N-ac 75.8 13 0.00028 40.2 9.0 88 389-517 63-152 (346)
124 PF02951 GSH-S_N: Prokaryotic 74.8 3.8 8.3E-05 37.5 3.9 40 278-320 1-40 (119)
125 TIGR03568 NeuC_NnaA UDP-N-acet 71.1 33 0.00072 37.2 10.8 90 388-521 88-179 (365)
126 PF03033 Glyco_transf_28: Glyc 70.4 6.3 0.00014 35.7 4.4 23 298-320 13-35 (139)
127 TIGR00661 MJ1255 conserved hyp 68.9 12 0.00026 39.5 6.7 28 292-320 8-36 (321)
128 PRK00207 sulfur transfer compl 68.4 10 0.00022 35.0 5.3 40 278-320 1-41 (128)
129 PLN02166 dTDP-glucose 4,6-dehy 67.9 7.6 0.00017 43.3 5.1 46 264-319 107-152 (436)
130 PF12038 DUF3524: Domain of un 67.8 58 0.0012 31.7 10.3 81 390-494 56-136 (168)
131 PHA03392 egt ecdysteroid UDP-g 66.2 8.8 0.00019 43.7 5.3 39 278-321 21-59 (507)
132 TIGR03713 acc_sec_asp1 accesso 62.6 10 0.00022 43.3 5.0 45 569-614 320-369 (519)
133 PLN00016 RNA-binding protein; 61.5 8.6 0.00019 41.6 4.0 39 277-321 52-90 (378)
134 COG2910 Putative NADH-flavin r 60.1 13 0.00029 36.7 4.5 36 278-323 1-36 (211)
135 TIGR01915 npdG NADPH-dependent 59.9 12 0.00027 37.3 4.5 33 278-320 1-33 (219)
136 PF03358 FMN_red: NADPH-depend 59.5 21 0.00045 33.1 5.7 40 278-320 1-40 (152)
137 PRK06249 2-dehydropantoate 2-r 58.8 16 0.00034 38.7 5.3 35 275-320 3-37 (313)
138 COG3660 Predicted nucleoside-d 56.3 2.7E+02 0.0058 29.4 14.2 38 278-323 1-38 (329)
139 PRK06756 flavodoxin; Provision 55.7 21 0.00046 33.1 5.1 37 277-318 1-37 (148)
140 PRK08305 spoVFB dipicolinate s 54.7 24 0.00053 35.1 5.5 36 277-320 5-42 (196)
141 COG4635 HemG Flavodoxin [Energ 54.0 21 0.00045 34.4 4.6 36 278-318 1-36 (175)
142 PF06564 YhjQ: YhjQ protein; 51.2 19 0.00041 37.1 4.1 35 278-318 1-37 (243)
143 COG0569 TrkA K+ transport syst 51.0 18 0.00039 36.6 4.0 26 295-320 7-32 (225)
144 PF13528 Glyco_trans_1_3: Glyc 50.9 24 0.00052 36.7 5.1 37 278-321 1-37 (318)
145 PRK09271 flavodoxin; Provision 50.8 28 0.0006 33.1 5.1 36 278-318 1-36 (160)
146 COG1819 Glycosyl transferases, 50.4 17 0.00037 40.1 4.0 38 277-320 1-38 (406)
147 PF03446 NAD_binding_2: NAD bi 49.4 24 0.00051 33.6 4.3 31 277-318 1-31 (163)
148 PLN02695 GDP-D-mannose-3',5'-e 49.1 27 0.00059 37.7 5.3 41 268-319 13-53 (370)
149 CHL00194 ycf39 Ycf39; Provisio 49.0 20 0.00044 37.6 4.2 33 278-320 1-33 (317)
150 PF06925 MGDG_synth: Monogalac 48.5 84 0.0018 29.9 8.1 19 476-494 136-154 (169)
151 PRK10037 cell division protein 48.2 23 0.0005 36.0 4.4 34 278-317 1-36 (250)
152 PF02441 Flavoprotein: Flavopr 48.0 24 0.00052 32.2 4.0 36 278-320 1-36 (129)
153 PRK09739 hypothetical protein; 46.9 46 0.00099 32.7 6.1 42 276-320 2-43 (199)
154 COG1763 MobB Molybdopterin-gua 45.8 35 0.00075 32.9 4.8 38 277-319 1-38 (161)
155 TIGR00087 surE 5'/3'-nucleotid 45.2 30 0.00066 35.6 4.6 38 278-323 1-38 (244)
156 KOG1429 dTDP-glucose 4-6-dehyd 44.8 35 0.00075 36.1 4.9 31 278-318 28-58 (350)
157 TIGR01281 DPOR_bchL light-inde 44.2 29 0.00064 35.5 4.4 33 278-318 1-35 (268)
158 CHL00175 minD septum-site dete 44.1 40 0.00087 34.8 5.4 35 278-318 15-51 (281)
159 PLN00198 anthocyanidin reducta 43.9 39 0.00085 35.6 5.4 38 273-320 5-42 (338)
160 PRK06703 flavodoxin; Provision 43.4 41 0.0009 31.3 4.9 38 277-319 1-38 (151)
161 PLN02778 3,5-epimerase/4-reduc 43.1 30 0.00066 36.2 4.4 31 277-317 9-39 (298)
162 PRK13932 stationary phase surv 42.6 36 0.00079 35.3 4.7 39 277-323 5-43 (257)
163 COG0716 FldA Flavodoxins [Ener 42.3 39 0.00085 31.7 4.6 37 277-318 1-37 (151)
164 TIGR01380 glut_syn glutathione 42.3 25 0.00054 37.3 3.6 41 278-321 1-41 (312)
165 PLN02206 UDP-glucuronate decar 41.9 38 0.00082 37.8 5.1 43 266-318 108-150 (442)
166 COG1553 DsrE Uncharacterized c 41.9 62 0.0013 29.9 5.5 42 278-322 1-43 (126)
167 KOG2130 Phosphatidylserine-spe 41.7 25 0.00054 37.4 3.3 19 97-115 320-338 (407)
168 PRK12827 short chain dehydroge 41.7 48 0.001 32.7 5.4 34 276-319 5-38 (249)
169 PRK13933 stationary phase surv 41.1 46 0.001 34.5 5.2 38 278-323 1-38 (253)
170 PRK05708 2-dehydropantoate 2-r 40.3 37 0.0008 35.8 4.5 33 277-320 2-34 (305)
171 PF02374 ArsA_ATPase: Anion-tr 40.1 32 0.00069 36.5 4.0 38 278-322 1-40 (305)
172 PLN00141 Tic62-NAD(P)-related 38.7 61 0.0013 32.7 5.7 33 278-320 18-50 (251)
173 PRK13849 putative crown gall t 38.6 45 0.00098 33.8 4.7 36 278-319 1-38 (231)
174 TIGR01007 eps_fam capsular exo 38.1 58 0.0013 31.8 5.3 37 278-318 17-53 (204)
175 PF10727 Rossmann-like: Rossma 37.5 16 0.00034 33.8 1.0 34 276-320 9-42 (127)
176 PF04464 Glyphos_transf: CDP-G 36.9 1.5E+02 0.0033 31.7 8.7 100 473-605 130-237 (369)
177 PRK06522 2-dehydropantoate 2-r 36.9 44 0.00095 34.6 4.4 32 278-320 1-32 (304)
178 PRK10675 UDP-galactose-4-epime 36.8 35 0.00077 35.8 3.7 32 278-319 1-32 (338)
179 COG0496 SurE Predicted acid ph 36.8 45 0.00098 34.5 4.3 38 278-323 1-38 (252)
180 PRK14619 NAD(P)H-dependent gly 36.6 55 0.0012 34.5 5.1 34 276-320 3-36 (308)
181 TIGR01754 flav_RNR ribonucleot 36.4 56 0.0012 30.1 4.6 34 278-316 1-34 (140)
182 PF00201 UDPGT: UDP-glucoronos 36.0 16 0.00035 40.9 1.1 27 295-321 11-37 (500)
183 PRK00094 gpsA NAD(P)H-dependen 35.8 47 0.001 34.8 4.5 33 277-320 1-33 (325)
184 PRK10538 malonic semialdehyde 35.2 62 0.0013 32.3 5.1 33 278-320 1-33 (248)
185 PLN02712 arogenate dehydrogena 35.1 1.2E+02 0.0025 36.0 7.9 35 275-320 50-84 (667)
186 PRK12921 2-dehydropantoate 2-r 35.0 43 0.00093 34.8 4.0 31 278-319 1-31 (305)
187 PRK13935 stationary phase surv 34.9 54 0.0012 34.0 4.5 38 278-323 1-38 (253)
188 TIGR00715 precor6x_red precorr 34.9 57 0.0012 33.8 4.8 32 278-320 1-32 (256)
189 PRK05920 aromatic acid decarbo 34.4 73 0.0016 31.9 5.2 37 277-321 3-40 (204)
190 PRK14618 NAD(P)H-dependent gly 34.1 51 0.0011 34.9 4.5 33 277-320 4-36 (328)
191 PLN02427 UDP-apiose/xylose syn 34.1 52 0.0011 35.6 4.6 34 276-319 13-47 (386)
192 PRK05723 flavodoxin; Provision 34.1 60 0.0013 30.7 4.4 36 278-318 1-36 (151)
193 PLN02662 cinnamyl-alcohol dehy 33.5 67 0.0015 33.3 5.2 28 293-320 10-37 (322)
194 COG0300 DltE Short-chain dehyd 33.5 73 0.0016 33.3 5.3 36 278-322 6-41 (265)
195 PRK13934 stationary phase surv 33.5 57 0.0012 34.1 4.4 38 278-323 1-38 (266)
196 PRK05246 glutathione synthetas 33.2 41 0.00089 35.6 3.5 42 277-321 1-42 (316)
197 PRK07308 flavodoxin; Validated 33.0 78 0.0017 29.3 5.0 27 292-318 11-37 (146)
198 PRK12825 fabG 3-ketoacyl-(acyl 33.0 69 0.0015 31.4 4.9 34 277-320 6-39 (249)
199 PRK07313 phosphopantothenoylcy 32.6 80 0.0017 30.9 5.2 35 278-320 2-37 (182)
200 PRK08229 2-dehydropantoate 2-r 32.3 52 0.0011 34.9 4.1 33 277-320 2-34 (341)
201 PRK13982 bifunctional SbtC-lik 32.2 83 0.0018 35.7 5.8 37 276-320 69-106 (475)
202 PRK06849 hypothetical protein; 32.1 62 0.0013 35.2 4.8 35 276-320 3-37 (389)
203 PRK06924 short chain dehydroge 31.7 59 0.0013 32.3 4.2 25 293-320 10-34 (251)
204 PRK09134 short chain dehydroge 31.6 77 0.0017 31.8 5.1 24 293-319 18-41 (258)
205 PRK05854 short chain dehydroge 31.5 90 0.002 32.7 5.8 33 279-320 15-47 (313)
206 PRK09730 putative NAD(P)-bindi 31.4 58 0.0013 32.1 4.1 33 278-319 1-33 (247)
207 PLN02686 cinnamoyl-CoA reducta 31.4 72 0.0016 34.4 5.1 26 294-319 60-85 (367)
208 PRK00346 surE 5'(3')-nucleotid 31.4 67 0.0014 33.3 4.5 38 278-323 1-38 (250)
209 PRK11064 wecC UDP-N-acetyl-D-m 31.4 58 0.0013 36.1 4.4 33 276-319 2-34 (415)
210 PLN02896 cinnamyl-alcohol dehy 31.0 73 0.0016 33.9 5.0 32 278-319 11-42 (353)
211 PRK05884 short chain dehydroge 30.9 80 0.0017 31.2 5.0 33 278-320 1-33 (223)
212 PRK05693 short chain dehydroge 30.8 60 0.0013 33.0 4.2 34 278-320 1-34 (274)
213 PRK00211 sulfur relay protein 30.7 96 0.0021 28.2 5.0 43 277-322 1-43 (119)
214 PF02525 Flavodoxin_2: Flavodo 30.6 81 0.0018 30.7 4.9 38 278-318 1-40 (199)
215 PRK11104 hemG protoporphyrinog 30.6 65 0.0014 31.2 4.1 35 278-318 1-35 (177)
216 PRK09004 FMN-binding protein M 30.6 82 0.0018 29.5 4.7 35 279-318 3-37 (146)
217 PRK10427 putative PTS system f 30.5 1E+02 0.0023 27.9 5.1 40 277-321 2-43 (114)
218 PHA02519 plasmid partition pro 30.4 81 0.0018 34.7 5.3 38 275-318 103-142 (387)
219 COG0451 WcaG Nucleoside-diphos 30.4 57 0.0012 33.5 4.0 29 293-321 6-34 (314)
220 PF13460 NAD_binding_10: NADH( 30.2 47 0.001 31.3 3.1 29 293-321 4-32 (183)
221 PF03721 UDPG_MGDP_dh_N: UDP-g 30.2 48 0.001 32.4 3.2 30 278-318 1-30 (185)
222 PRK07454 short chain dehydroge 30.0 71 0.0015 31.5 4.5 35 277-320 5-39 (241)
223 PRK05993 short chain dehydroge 30.0 73 0.0016 32.5 4.7 35 277-320 3-37 (277)
224 TIGR01968 minD_bact septum sit 29.8 72 0.0016 32.0 4.5 26 293-318 10-37 (261)
225 PRK03767 NAD(P)H:quinone oxido 29.7 95 0.0021 30.5 5.2 38 277-319 1-39 (200)
226 PRK05568 flavodoxin; Provision 29.5 1.1E+02 0.0023 28.0 5.2 37 278-319 2-38 (142)
227 COG1192 Soj ATPases involved i 29.4 75 0.0016 32.2 4.6 38 277-320 1-41 (259)
228 PRK00170 azoreductase; Reviewe 29.4 1E+02 0.0023 29.8 5.4 40 277-319 1-43 (201)
229 PRK07023 short chain dehydroge 29.3 62 0.0014 32.1 3.9 34 277-320 1-34 (243)
230 PRK11199 tyrA bifunctional cho 29.3 64 0.0014 35.2 4.2 34 277-320 98-131 (374)
231 PRK11670 antiporter inner memb 29.3 74 0.0016 34.7 4.7 37 276-318 105-143 (369)
232 COG1087 GalE UDP-glucose 4-epi 29.3 61 0.0013 34.6 3.8 26 293-318 6-31 (329)
233 CHL00072 chlL photochlorophyll 29.2 95 0.0021 32.6 5.4 35 278-320 1-37 (290)
234 PRK06719 precorrin-2 dehydroge 29.2 49 0.0011 31.5 2.9 25 296-320 21-45 (157)
235 COG1090 Predicted nucleoside-d 29.1 50 0.0011 34.7 3.2 30 293-322 4-33 (297)
236 PRK02122 glucosamine-6-phospha 29.0 96 0.0021 36.6 5.8 47 271-323 363-409 (652)
237 TIGR03012 sulf_tusD_dsrE sulfu 29.0 1E+02 0.0022 28.3 4.9 39 279-320 1-40 (127)
238 PF00070 Pyr_redox: Pyridine n 28.6 60 0.0013 26.6 3.1 28 295-322 6-33 (80)
239 PRK06523 short chain dehydroge 28.5 1.2E+02 0.0026 30.3 5.8 25 293-320 18-42 (260)
240 PRK08655 prephenate dehydrogen 28.4 67 0.0014 35.9 4.3 33 278-320 1-33 (437)
241 COG0003 ArsA Predicted ATPase 28.4 93 0.002 33.4 5.2 37 277-320 1-39 (322)
242 PRK01372 ddl D-alanine--D-alan 28.3 1.1E+02 0.0023 31.9 5.6 42 277-320 4-45 (304)
243 PRK15181 Vi polysaccharide bio 28.3 69 0.0015 34.1 4.2 35 276-320 14-48 (348)
244 PLN02350 phosphogluconate dehy 28.3 82 0.0018 35.9 5.0 36 273-319 2-37 (493)
245 COG0702 Predicted nucleoside-d 28.2 59 0.0013 32.6 3.6 30 293-322 6-35 (275)
246 PRK08703 short chain dehydroge 27.9 1.2E+02 0.0027 29.8 5.8 25 293-320 15-39 (239)
247 PRK13869 plasmid-partitioning 27.7 89 0.0019 34.6 5.0 36 277-318 120-157 (405)
248 TIGR03018 pepcterm_TyrKin exop 27.6 1.4E+02 0.0031 29.3 6.1 41 276-320 33-74 (207)
249 PRK10446 ribosomal protein S6 27.6 89 0.0019 32.7 4.9 35 278-320 1-35 (300)
250 PF04413 Glycos_transf_N: 3-De 27.5 1.1E+02 0.0023 30.1 5.1 90 388-517 90-179 (186)
251 PRK07417 arogenate dehydrogena 27.2 81 0.0018 32.7 4.4 32 278-320 1-32 (279)
252 PRK06732 phosphopantothenate-- 27.2 1E+02 0.0023 31.1 5.1 25 293-320 25-49 (229)
253 PRK04155 chaperone protein Hch 27.1 1.6E+02 0.0034 31.1 6.6 51 269-321 43-100 (287)
254 PRK05569 flavodoxin; Provision 26.9 1.2E+02 0.0027 27.5 5.2 37 278-319 2-38 (141)
255 PRK12745 3-ketoacyl-(acyl-carr 26.9 87 0.0019 31.1 4.5 34 278-320 2-35 (256)
256 PRK14620 NAD(P)H-dependent gly 26.8 80 0.0017 33.4 4.4 32 278-320 1-32 (326)
257 COG2084 MmsB 3-hydroxyisobutyr 26.8 73 0.0016 33.6 4.0 26 295-320 7-32 (286)
258 TIGR00872 gnd_rel 6-phosphoglu 26.8 96 0.0021 32.6 4.9 32 278-320 1-32 (298)
259 COG4088 Predicted nucleotide k 26.7 65 0.0014 32.7 3.3 40 278-322 1-40 (261)
260 PF13614 AAA_31: AAA domain; P 26.6 1.3E+02 0.0028 27.6 5.3 29 292-320 10-38 (157)
261 TIGR03029 EpsG chain length de 26.5 1.3E+02 0.0029 30.7 5.9 37 278-318 103-139 (274)
262 TIGR02852 spore_dpaB dipicolin 26.4 1.2E+02 0.0026 30.0 5.1 29 293-321 8-38 (187)
263 PRK06029 3-octaprenyl-4-hydrox 26.4 1E+02 0.0023 30.3 4.8 36 277-320 1-38 (185)
264 PLN02650 dihydroflavonol-4-red 25.9 1.1E+02 0.0024 32.5 5.3 28 293-320 11-38 (351)
265 PRK07236 hypothetical protein; 25.9 85 0.0018 33.9 4.5 34 274-318 3-36 (386)
266 PLN02208 glycosyltransferase f 25.7 1.3E+02 0.0028 33.7 5.9 38 277-320 4-41 (442)
267 cd02032 Bchl_like This family 25.6 1.2E+02 0.0026 31.0 5.3 35 278-320 1-37 (267)
268 PRK08309 short chain dehydroge 25.6 1.1E+02 0.0025 29.6 4.9 19 301-319 13-31 (177)
269 TIGR03466 HpnA hopanoid-associ 25.5 72 0.0016 33.0 3.7 27 294-320 7-33 (328)
270 cd03813 GT1_like_3 This family 25.5 57 0.0012 36.5 3.2 41 279-320 1-41 (475)
271 PRK06101 short chain dehydroge 25.4 92 0.002 30.9 4.3 34 278-320 1-34 (240)
272 PRK08105 flavodoxin; Provision 25.2 1.2E+02 0.0026 28.5 4.8 28 292-319 11-38 (149)
273 TIGR01426 MGT glycosyltransfer 25.1 57 0.0012 35.2 3.0 21 300-320 12-32 (392)
274 PRK06953 short chain dehydroge 24.9 80 0.0017 30.9 3.7 34 278-320 1-34 (222)
275 COG3980 spsG Spore coat polysa 24.6 1.2E+02 0.0026 32.2 4.9 41 278-320 1-41 (318)
276 PRK14571 D-alanyl-alanine synt 24.6 1.4E+02 0.003 31.2 5.6 40 278-319 1-40 (299)
277 PRK08177 short chain dehydroge 24.3 97 0.0021 30.4 4.2 25 293-320 10-34 (225)
278 PRK11914 diacylglycerol kinase 24.2 2E+02 0.0043 30.2 6.7 46 274-322 5-50 (306)
279 KOG1192 UDP-glucuronosyl and U 24.2 1.1E+02 0.0025 33.9 5.2 30 293-322 15-44 (496)
280 PRK07102 short chain dehydroge 24.1 98 0.0021 30.6 4.3 25 293-320 10-34 (243)
281 PLN02214 cinnamoyl-CoA reducta 24.0 1.2E+02 0.0026 32.2 5.2 27 294-320 17-43 (342)
282 PRK08267 short chain dehydroge 23.9 99 0.0021 31.0 4.3 26 295-320 9-34 (260)
283 COG2085 Predicted dinucleotide 23.6 63 0.0014 32.5 2.7 30 293-322 6-35 (211)
284 PRK14494 putative molybdopteri 23.5 1.5E+02 0.0032 30.3 5.3 38 278-320 1-38 (229)
285 PRK06180 short chain dehydroge 23.5 1.1E+02 0.0023 31.2 4.5 25 293-320 13-37 (277)
286 TIGR03371 cellulose_yhjQ cellu 23.5 1.3E+02 0.0028 30.0 5.0 37 278-320 1-39 (246)
287 TIGR02622 CDP_4_6_dhtase CDP-g 23.1 99 0.0021 32.8 4.3 32 278-319 5-36 (349)
288 COG2894 MinD Septum formation 23.0 1.1E+02 0.0024 31.4 4.2 38 279-322 3-42 (272)
289 PRK05653 fabG 3-ketoacyl-(acyl 22.9 1.2E+02 0.0025 29.7 4.5 25 293-320 14-38 (246)
290 PRK13234 nifH nitrogenase redu 22.9 1.2E+02 0.0027 31.8 4.8 36 276-318 2-39 (295)
291 PLN02657 3,8-divinyl protochlo 22.9 1.1E+02 0.0024 33.3 4.7 35 277-321 60-94 (390)
292 PF02635 DrsE: DsrE/DsrF-like 22.5 2E+02 0.0044 24.8 5.6 40 278-320 1-43 (122)
293 PRK07806 short chain dehydroge 22.5 1.8E+02 0.0039 28.7 5.8 24 293-319 15-38 (248)
294 PF00185 OTCace: Aspartate/orn 22.5 1.2E+02 0.0026 28.8 4.3 36 277-321 2-37 (158)
295 PF01210 NAD_Gly3P_dh_N: NAD-d 22.5 61 0.0013 30.6 2.2 25 296-320 7-31 (157)
296 PRK13608 diacylglycerol glucos 22.1 1.4E+02 0.0031 32.4 5.4 37 276-317 4-43 (391)
297 PLN02572 UDP-sulfoquinovose sy 22.1 1.5E+02 0.0033 33.0 5.6 33 276-318 46-78 (442)
298 PRK09291 short chain dehydroge 22.0 1.4E+02 0.003 29.6 4.9 25 293-320 11-35 (257)
299 PRK14569 D-alanyl-alanine synt 22.0 1.7E+02 0.0036 30.7 5.6 42 276-319 2-43 (296)
300 PLN03007 UDP-glucosyltransfera 21.8 1.5E+02 0.0033 33.5 5.6 39 277-321 5-43 (482)
301 PRK09599 6-phosphogluconate de 21.7 1.3E+02 0.0028 31.5 4.8 26 295-320 7-32 (301)
302 PRK12320 hypothetical protein; 21.7 91 0.002 37.1 3.9 27 293-319 6-32 (699)
303 PRK06182 short chain dehydroge 21.7 1.7E+02 0.0036 29.7 5.5 25 293-320 12-36 (273)
304 PRK06129 3-hydroxyacyl-CoA deh 21.7 1.3E+02 0.0028 31.6 4.8 32 278-320 3-34 (308)
305 PRK13235 nifH nitrogenase redu 21.6 1.1E+02 0.0025 31.3 4.3 26 293-318 9-36 (274)
306 PRK15059 tartronate semialdehy 21.4 1.1E+02 0.0024 32.1 4.1 25 295-319 7-31 (292)
307 PRK06718 precorrin-2 dehydroge 21.4 84 0.0018 31.2 3.0 25 297-321 19-43 (202)
308 PRK13931 stationary phase surv 21.2 1.4E+02 0.003 31.2 4.6 39 278-323 1-42 (261)
309 PRK10818 cell division inhibit 21.1 1.8E+02 0.0038 29.7 5.5 37 278-320 2-40 (270)
310 PF00258 Flavodoxin_1: Flavodo 21.1 1.8E+02 0.004 26.3 5.1 30 292-321 6-35 (143)
311 PRK06947 glucose-1-dehydrogena 21.0 1.1E+02 0.0024 30.2 4.0 32 278-318 2-33 (248)
312 PRK06194 hypothetical protein; 21.0 1.4E+02 0.0031 30.3 4.9 24 293-319 15-38 (287)
313 TIGR00421 ubiX_pad polyprenyl 20.7 1.5E+02 0.0032 29.0 4.6 28 293-320 7-35 (181)
314 PRK06753 hypothetical protein; 20.6 1.1E+02 0.0023 32.8 3.9 30 278-318 1-30 (373)
315 PRK13232 nifH nitrogenase redu 20.6 1.1E+02 0.0024 31.4 3.9 26 293-318 9-36 (273)
316 TIGR03026 NDP-sugDHase nucleot 20.5 93 0.002 34.2 3.5 32 278-320 1-32 (411)
317 PRK12824 acetoacetyl-CoA reduc 20.2 1.4E+02 0.003 29.4 4.4 27 294-320 9-35 (245)
318 PRK07533 enoyl-(acyl carrier p 20.1 1.9E+02 0.0042 29.1 5.5 33 279-319 11-44 (258)
319 TIGR01963 PHB_DH 3-hydroxybuty 20.0 1.3E+02 0.0029 29.7 4.2 25 293-320 10-34 (255)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.8e-48 Score=442.36 Aligned_cols=332 Identities=30% Similarity=0.455 Sum_probs=262.6
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCc-----ceeEeeccccceEEEEE
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGI-----RKRYRVDRQDIEVAYFQ 349 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~-----~~~~~~~g~~~~~~v~~ 349 (617)
+++|||+||++|++||.++||+|+++..|+++|+++||+|.||+|.|+........++ ...+.++|..+.++++.
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 4569999999999999999999999999999999999999999999986542111111 11112445455688899
Q ss_pred eeeCCcEEEEecCc---cccccCCCcCCCCCC-ccccccccccc---c--CCCCcEEEEcCcchhHHHHHHHHHhhhccC
Q 007130 350 AYIDGVDFVFLDSP---LFRHLGNNIYGGGRE-IPWYVPCGGVC---Y--GDGNLVFIANDWHTALLPVYLKAYYRDNGL 420 (617)
Q Consensus 350 ~~~~gV~v~~i~~p---~~~~~~~~iy~~~~~-~~~~l~~~~v~---~--~~~pDIIHaHd~~tal~~~~l~~~~~~~~~ 420 (617)
..++||++|||+++ .||.+ ..+|+..++ .+|.+||++++ . +.+|||||||||+++++|.+++..|...+
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R-~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~- 636 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR-AQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKG- 636 (977)
T ss_pred EEECCeeEEEEecCCchhccCC-CCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhcc-
Confidence 99999999999853 36765 468876543 25666665432 2 46899999999999998555554454433
Q ss_pred CCCceEEEEEeCCcccCCCCCCcccccCCCccccc-cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCC
Q 007130 421 MQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLD-LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGW 499 (617)
Q Consensus 421 ~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~-~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~ 499 (617)
+.++|+|+|+||+.|||.+|...+..+|+++.++. .-++.+.. ...+|+++.++.+||+|+|||+.|++++.+ ++|+
T Consensus 637 ~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~-~~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~ 714 (977)
T PLN02939 637 FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNA-HGRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGR 714 (977)
T ss_pred CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhcc-CCchHHHHHHHHhCCeeEeeeHHHHHHHHH-Hhcc
Confidence 36789999999999999998776666888766542 11111000 126799999999999999999999999998 7899
Q ss_pred ccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCC-CCCcEEEEEeCCc
Q 007130 500 GLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVR-DDVPVIGFIGRLD 578 (617)
Q Consensus 500 gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~-~d~~vIlfVGRL~ 578 (617)
||+.+|+.+..++.+|+||||++.|+|..|++++ .+|+.+++ .+|..||.++|+++|++.+ ++.++|+|||||+
T Consensus 715 GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~----~~Ys~~dl-~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~ 789 (977)
T PLN02939 715 GLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLK----VQYNANDL-QGKAANKAALRKQLGLSSADASQPLVGCITRLV 789 (977)
T ss_pred chHHHhccccCCceEEecceehhhcCCccccccc----cccChhhh-hhhhhhhHHHHHHhCCCcccccceEEEEeecCC
Confidence 9999998899999999999999999999887665 78998887 5899999999999999842 4679999999999
Q ss_pred cccCHHHHHHHHHhccCCCcEEEEEecCh-hhhHHHHH
Q 007130 579 HQKGVDLIAEAIPWMMGQDVQLSHVGHWQ-TRFGRDAE 615 (617)
Q Consensus 579 ~qKGvdlLIeA~~~L~~~dv~LVIvG~G~-~~~e~~l~ 615 (617)
++||+++|++|+..+...+++|||+|+|+ ..+++.++
T Consensus 790 ~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~ 827 (977)
T PLN02939 790 PQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFE 827 (977)
T ss_pred cccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHH
Confidence 99999999999998877789999999996 44544443
No 2
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.9e-45 Score=409.27 Aligned_cols=332 Identities=25% Similarity=0.436 Sum_probs=248.1
Q ss_pred CCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC-C-CCCc--ceeE--eeccccceEEE
Q 007130 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP-Q-DTGI--RKRY--RVDRQDIEVAY 347 (617)
Q Consensus 274 ~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~-~-~~~~--~~~~--~~~g~~~~~~v 347 (617)
++++|||++|+.|++||.++||+|+++..|+++|+++||+|.||+|.|+.+... . .... ...+ .+.+....+.+
T Consensus 2 ~~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (489)
T PRK14098 2 SRRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHV 81 (489)
T ss_pred CCCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEE
Confidence 445699999999999999999999999999999999999999999999876431 0 0011 0011 11211111122
Q ss_pred EEeeeC--CcEEEEecCccccccCCCcCCCC-------CC-cccccccccc---cc--CCCCcEEEEcCcchhHHHHHHH
Q 007130 348 FQAYID--GVDFVFLDSPLFRHLGNNIYGGG-------RE-IPWYVPCGGV---CY--GDGNLVFIANDWHTALLPVYLK 412 (617)
Q Consensus 348 ~~~~~~--gV~v~~i~~p~~~~~~~~iy~~~-------~~-~~~~l~~~~v---~~--~~~pDIIHaHd~~tal~~~~l~ 412 (617)
.....+ +|++|++++|.||.+. .+|+.. ++ .+|.++|.++ +. +.+|||||+|||+++++|++++
T Consensus 82 ~~~~~~~~~v~~~~~~~~~~f~r~-~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~ 160 (489)
T PRK14098 82 KVTALPSSKIQTYFLYNEKYFKRN-GLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLK 160 (489)
T ss_pred EEecccCCCceEEEEeCHHHcCCC-CcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHH
Confidence 222233 6999999999999864 678642 11 2444454432 22 4589999999999999999998
Q ss_pred HHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHH
Q 007130 413 AYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWEL 492 (617)
Q Consensus 413 ~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l 492 (617)
..+.......++|+|+|+||+.+||.++...+..+ +|..++..+.++. ..+++++.++.+||+|||||+.+++++
T Consensus 161 ~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~~~~----~~~n~lk~~i~~ad~VitVS~~~a~ei 235 (489)
T PRK14098 161 TVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLHREG----DEVNMLYTGVEHADLLTTTSPRYAEEI 235 (489)
T ss_pred HHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhhhcC----CcccHHHHHHHhcCcceeeCHHHHHHh
Confidence 66543333458999999999999998765433222 3333222221111 256899999999999999999999999
Q ss_pred Hhh-hcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEE
Q 007130 493 KTA-EGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVI 571 (617)
Q Consensus 493 ~~~-~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vI 571 (617)
.+. .+|+|+..+|+....++.+|+||||++.|+|..+..+. .+|+.+++ .+|..+|..+++++|++.+++.++|
T Consensus 236 ~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~----~~~~~~~~-~~k~~~k~~l~~~lgl~~~~~~~~i 310 (489)
T PRK14098 236 AGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIK----KRYSIERL-DGKLENKKALLEEVGLPFDEETPLV 310 (489)
T ss_pred CcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCccccccc----ccCCcchh-hhHHHHHHHHHHHhCCCCccCCCEE
Confidence 763 46778887777778999999999999999998665443 56776665 4778899999999999876788999
Q ss_pred EEEeCCccccCHHHHHHHHHhccCCCcEEEEEecChhhhHHHHHh
Q 007130 572 GFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHVGHWQTRFGRDAEE 616 (617)
Q Consensus 572 lfVGRL~~qKGvdlLIeA~~~L~~~dv~LVIvG~G~~~~e~~l~~ 616 (617)
+|+|||+++||+++|++|++.+.+.+++|+|+|+|+..+++.+++
T Consensus 311 ~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~ 355 (489)
T PRK14098 311 GVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQD 355 (489)
T ss_pred EEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHH
Confidence 999999999999999999999987799999999998766666554
No 3
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=3e-45 Score=407.32 Aligned_cols=324 Identities=32% Similarity=0.472 Sum_probs=252.5
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcc--eeEeeccccceEEEEEeeeC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR--KRYRVDRQDIEVAYFQAYID 353 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~--~~~~~~g~~~~~~v~~~~~~ 353 (617)
++|||++|+.|++|+.++||+|+++..|+++|+++||+|.||+|.|+.+.... .... ..+.+. ....++++....+
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGI-EDAEQVHSFPDL-FGGPARLLAARAG 79 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhh-cCceEEEEEeee-CCceEEEEEEEeC
Confidence 56999999999999999999999999999999999999999999998763211 1111 111110 0114677888889
Q ss_pred CcEEEEecCccccccCCCcCCCC------C-Ccccccccccc---c----cCCCCcEEEEcCcchhHHHHHHHHHhhhcc
Q 007130 354 GVDFVFLDSPLFRHLGNNIYGGG------R-EIPWYVPCGGV---C----YGDGNLVFIANDWHTALLPVYLKAYYRDNG 419 (617)
Q Consensus 354 gV~v~~i~~p~~~~~~~~iy~~~------~-~~~~~l~~~~v---~----~~~~pDIIHaHd~~tal~~~~l~~~~~~~~ 419 (617)
||++|++++|.||.+...+|+.. + ..+|.+||+++ + .+.+|||||+|||+++++|.+++.. .
T Consensus 80 ~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~--~-- 155 (485)
T PRK14099 80 GLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYS--G-- 155 (485)
T ss_pred CceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhC--C--
Confidence 99999999999988754477532 1 12455565532 2 2468999999999999999887531 1
Q ss_pred CCCCceEEEEEeCCcccCCCCCCcccccCCCccccc--cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhc
Q 007130 420 LMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLD--LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEG 497 (617)
Q Consensus 420 ~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~--~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~ 497 (617)
..++|+|+|+||+.+||.++...+..+++++.++. .+.+++ .+++++.+++.||.|+|||+.+++++.+.++
T Consensus 156 -~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~ 229 (485)
T PRK14099 156 -RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYG-----GIGYLKAGLQLADRITTVSPTYALEIQGPEA 229 (485)
T ss_pred -CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCC-----CccHHHHHHHhcCeeeecChhHHHHHhcccC
Confidence 24689999999999999887655555666654432 223332 3467899999999999999999999987667
Q ss_pred CCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCC
Q 007130 498 GWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRL 577 (617)
Q Consensus 498 G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL 577 (617)
|+|++.+++.+..++.+|+||||++.|+|..+..++ .+|+.+++ .+|..+|..+|+++|++.+++.++|+|||||
T Consensus 230 g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~----~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL 304 (485)
T PRK14099 230 GMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIA----ATYDVETL-AARAANKAALQARFGLDPDPDALLLGVISRL 304 (485)
T ss_pred CcChHHHHHhhCCCeEEEecCCchhhccccccchhh----hcCChhHH-HhHHHhHHHHHHHcCCCcccCCcEEEEEecC
Confidence 788877777778899999999999999998765443 56776665 4677889999999999865578899999999
Q ss_pred ccccCHHHHHHHHHhccCCCcEEEEEecChhhhHHHHHh
Q 007130 578 DHQKGVDLIAEAIPWMMGQDVQLSHVGHWQTRFGRDAEE 616 (617)
Q Consensus 578 ~~qKGvdlLIeA~~~L~~~dv~LVIvG~G~~~~e~~l~~ 616 (617)
+++||+++|++|++.+.+.+++|+|+|+|++.+++.+++
T Consensus 305 ~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~ 343 (485)
T PRK14099 305 SWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRA 343 (485)
T ss_pred CccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHH
Confidence 999999999999999887789999999998766666654
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=3.6e-43 Score=389.38 Aligned_cols=325 Identities=41% Similarity=0.632 Sum_probs=252.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC----CCcceeEeeccccceEEEEEeeeC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQD----TGIRKRYRVDRQDIEVAYFQAYID 353 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~----~~~~~~~~~~g~~~~~~v~~~~~~ 353 (617)
|||+||+.|++|+.++||+|+++..|+++|+++||+|+|++|.|+....... ......+.+++..+.++++....+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 8999999999999999999999999999999999999999999986543211 011123445667788899999999
Q ss_pred CcEEEEecCccccccCCCcCCC--CCC-ccccccccc---cc--cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCce
Q 007130 354 GVDFVFLDSPLFRHLGNNIYGG--GRE-IPWYVPCGG---VC--YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTR 425 (617)
Q Consensus 354 gV~v~~i~~p~~~~~~~~iy~~--~~~-~~~~l~~~~---v~--~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iP 425 (617)
|+++|+++++.++.+...+|+. ... .++.+++.+ ++ .+.+|||||+|+|++++++.+++..+.. .++|
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~----~~~~ 156 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRP----NPIK 156 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccC----CCCC
Confidence 9999999999877653347762 221 122223322 22 2468999999999999999988764310 1489
Q ss_pred EEEEEeCCcccCCCCCCcccccCCCccccc--cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcccc
Q 007130 426 SLLVIHNIAHQGRGPVSDFVYTDLPGHYLD--LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHN 503 (617)
Q Consensus 426 vV~TiH~~~~qg~~p~~~~~~~glp~~~~~--~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~ 503 (617)
+|+|+|++.+||.++...+..++++..++. .+++++ .+++++.+++.||+|+|||+.+++++.+..+|+|+..
T Consensus 157 ~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~ 231 (473)
T TIGR02095 157 TVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYG-----RVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDG 231 (473)
T ss_pred EEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCC-----chHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchh
Confidence 999999998998877655544566543332 122232 5688999999999999999999999987667778877
Q ss_pred ccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCH
Q 007130 504 IINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGV 583 (617)
Q Consensus 504 ~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGv 583 (617)
+++.+..++.+|+||||++.|+|..+..++ .+|+.+++ .++..+|..+++++|++.+++.++|+|+|||+++||+
T Consensus 232 ~l~~~~~ki~~I~NGid~~~~~p~~~~~~~----~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~ 306 (473)
T TIGR02095 232 VLKARSGKLRGILNGIDTEVWNPATDPYLK----ANYSADDL-AGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGV 306 (473)
T ss_pred HHHhcCCCeEEEeCCCCccccCCCCCcccc----cCcCccch-hhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccCh
Confidence 776678899999999999999997665443 56766554 3677788999999999865578999999999999999
Q ss_pred HHHHHHHHhccCCCcEEEEEecChhhhHHHHHh
Q 007130 584 DLIAEAIPWMMGQDVQLSHVGHWQTRFGRDAEE 616 (617)
Q Consensus 584 dlLIeA~~~L~~~dv~LVIvG~G~~~~e~~l~~ 616 (617)
++|++|++.+.+.+++|+|+|+|++.+++.+++
T Consensus 307 ~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~ 339 (473)
T TIGR02095 307 DLLLAALPELLELGGQLVVLGTGDPELEEALRE 339 (473)
T ss_pred HHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHH
Confidence 999999999987789999999997666655543
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=9.2e-42 Score=377.84 Aligned_cols=319 Identities=37% Similarity=0.543 Sum_probs=240.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEe--eeCCc
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQA--YIDGV 355 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~--~~~gV 355 (617)
|||+||+.|++|+.++||+|+++..|+++|+++||+|+|++|.|+...... ........+ ..++++.. ..+|+
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~gv 75 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKL-RDAQVVGRL----DLFTVLFGHLEGDGV 75 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhh-cCceEEEEe----eeEEEEEEeEEcCCc
Confidence 899999999999999999999999999999999999999999997653211 011111111 11344444 45899
Q ss_pred EEEEecCccccccCCCcCCCCCC-cccccccccc---c--cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEE
Q 007130 356 DFVFLDSPLFRHLGNNIYGGGRE-IPWYVPCGGV---C--YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLV 429 (617)
Q Consensus 356 ~v~~i~~p~~~~~~~~iy~~~~~-~~~~l~~~~v---~--~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~T 429 (617)
++|+++++.|+.+ ..+|+...+ .++.++|.++ + ...+|||||+|+|++++++.+++..+ .. ...++|+|+|
T Consensus 76 ~v~~v~~~~~~~~-~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~-~~-~~~~~~~v~T 152 (466)
T PRK00654 76 PVYLIDAPHLFDR-PSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKY-WR-GYPDIKTVFT 152 (466)
T ss_pred eEEEEeCHHHcCC-CCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhh-hc-cCCCCCEEEE
Confidence 9999999988875 357764322 2333343322 1 13589999999999999999887654 21 1347899999
Q ss_pred EeCCcccCCCCCCcccccCCCccccc--cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcccccccc
Q 007130 430 IHNIAHQGRGPVSDFVYTDLPGHYLD--LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINE 507 (617)
Q Consensus 430 iH~~~~qg~~p~~~~~~~glp~~~~~--~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~ 507 (617)
+|++.+||.++...+..++++..++. .+++++ .+++++.+++.||.|||||+.+++++.+..+|+|+..+++.
T Consensus 153 iH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~ 227 (466)
T PRK00654 153 IHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG-----QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRA 227 (466)
T ss_pred cCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCC-----cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHh
Confidence 99999998776554444555543321 122221 35788999999999999999999999876677777766766
Q ss_pred CCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHH
Q 007130 508 VDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIA 587 (617)
Q Consensus 508 ~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLI 587 (617)
+..++.+|+||||++.|+|..+..++ .+|+..++ .+|..+|+.+|+++|++ .++.++|+|+|||.++||+++|+
T Consensus 228 ~~~ki~vI~NGid~~~~~p~~~~~~~----~~~~~~~~-~~k~~~k~~l~~~~gl~-~~~~~~i~~vGRl~~~KG~~~li 301 (466)
T PRK00654 228 RSGKLSGILNGIDYDIWNPETDPLLA----ANYSADDL-EGKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDLVL 301 (466)
T ss_pred cccCceEecCCCCccccCCccCcccc----cccChhhh-hchHHHHHHHHHHhCCC-CCCCcEEEEeeccccccChHHHH
Confidence 78899999999999999997665443 46666555 36778889999999997 34678999999999999999999
Q ss_pred HHHHhccCCCcEEEEEecChhhhHHHHH
Q 007130 588 EAIPWMMGQDVQLSHVGHWQTRFGRDAE 615 (617)
Q Consensus 588 eA~~~L~~~dv~LVIvG~G~~~~e~~l~ 615 (617)
+|++.+.+.+++|+|+|+|++.+++.++
T Consensus 302 ~a~~~l~~~~~~lvivG~g~~~~~~~l~ 329 (466)
T PRK00654 302 EALPELLEQGGQLVLLGTGDPELEEAFR 329 (466)
T ss_pred HHHHHHHhcCCEEEEEecCcHHHHHHHH
Confidence 9999987779999999999765555544
No 6
>PLN02316 synthase/transferase
Probab=100.00 E-value=5.6e-40 Score=383.20 Aligned_cols=294 Identities=28% Similarity=0.471 Sum_probs=224.9
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcc--eeEeeccccceEEEEEeee
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR--KRYRVDRQDIEVAYFQAYI 352 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~--~~~~~~g~~~~~~v~~~~~ 352 (617)
.++|||+||+.|++|+.++||+|+++..|+++|+++||+|.||+|.|..........+. ..+...+ ..++++....
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~--~~~~v~~~~~ 662 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGG--TEIKVWFGKV 662 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCC--EEEEEEEEEE
Confidence 46699999999999999999999999999999999999999999999864321111111 1122222 3567788889
Q ss_pred CCcEEEEecCcc-ccccCCCcCCCCCC-ccccccccccc-----cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCce
Q 007130 353 DGVDFVFLDSPL-FRHLGNNIYGGGRE-IPWYVPCGGVC-----YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTR 425 (617)
Q Consensus 353 ~gV~v~~i~~p~-~~~~~~~iy~~~~~-~~~~l~~~~v~-----~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iP 425 (617)
+||++|+|+++. +|.+ ..+|+..++ .+|.+||.+++ .+.+|||||||||+++++|++++..+...+ +.++|
T Consensus 663 ~GV~vyfl~~~~~~F~r-~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~-~~~~p 740 (1036)
T PLN02316 663 EGLSVYFLEPQNGMFWA-GCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYG-LSKAR 740 (1036)
T ss_pred CCcEEEEEeccccccCC-CCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhc-cCCCC
Confidence 999999999763 6654 457764432 23444554332 246899999999999999999877554333 36789
Q ss_pred EEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcccccc
Q 007130 426 SLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNII 505 (617)
Q Consensus 426 vV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l 505 (617)
+|+|+|++.+++ ++++.++.+||+|||||+.|++++... + .+
T Consensus 741 ~V~TiHnl~~~~-------------------------------n~lk~~l~~AD~ViTVS~tya~EI~~~-~------~l 782 (1036)
T PLN02316 741 VVFTIHNLEFGA-------------------------------NHIGKAMAYADKATTVSPTYSREVSGN-S------AI 782 (1036)
T ss_pred EEEEeCCcccch-------------------------------hHHHHHHHHCCEEEeCCHHHHHHHHhc-c------Cc
Confidence 999999975421 234578889999999999999998752 1 12
Q ss_pred ccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHH
Q 007130 506 NEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDL 585 (617)
Q Consensus 506 ~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdl 585 (617)
.....++.+|+||||++.|+|..++.++ .+|+.+++..+|..+|+.+|+++|++. .+.++|+|||||+++||+++
T Consensus 783 ~~~~~Kl~vI~NGID~~~w~P~tD~~lp----~~y~~~~~~~gK~~~k~~Lr~~lGL~~-~d~plVg~VGRL~~qKGvdl 857 (1036)
T PLN02316 783 APHLYKFHGILNGIDPDIWDPYNDNFIP----VPYTSENVVEGKRAAKEALQQRLGLKQ-ADLPLVGIITRLTHQKGIHL 857 (1036)
T ss_pred ccccCCEEEEECCccccccCCccccccc----ccCCchhhhhhhhhhHHHHHHHhCCCc-ccCeEEEEEeccccccCHHH
Confidence 2245899999999999999998776554 567776655678889999999999973 46799999999999999999
Q ss_pred HHHHHHhccCCCcEEEEEecCh-hhhHHHHH
Q 007130 586 IAEAIPWMMGQDVQLSHVGHWQ-TRFGRDAE 615 (617)
Q Consensus 586 LIeA~~~L~~~dv~LVIvG~G~-~~~e~~l~ 615 (617)
|++|++.+++.+++|||+|+|+ ..+++.++
T Consensus 858 Li~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~ 888 (1036)
T PLN02316 858 IKHAIWRTLERNGQVVLLGSAPDPRIQNDFV 888 (1036)
T ss_pred HHHHHHHHhhcCcEEEEEeCCCCHHHHHHHH
Confidence 9999999887789999999995 34444433
No 7
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=364.87 Aligned_cols=327 Identities=34% Similarity=0.448 Sum_probs=256.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcce----eEeeccccceEEEEEeeeC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRK----RYRVDRQDIEVAYFQAYID 353 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~----~~~~~g~~~~~~v~~~~~~ 353 (617)
|||++++.|+.|+.++||+|+++..|+++|+++|++|.|+.|.|+...+......+. .+...+....+.+.....+
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999998543321111011 1122333333333333323
Q ss_pred -CcEEEEecCccccccC-CCcCCCCCC-cccccccccc---c-c-C--CCCcEEEEcCcchhHHHHHHHHHhhhccCCCC
Q 007130 354 -GVDFVFLDSPLFRHLG-NNIYGGGRE-IPWYVPCGGV---C-Y-G--DGNLVFIANDWHTALLPVYLKAYYRDNGLMQY 423 (617)
Q Consensus 354 -gV~v~~i~~p~~~~~~-~~iy~~~~~-~~~~l~~~~v---~-~-~--~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~ 423 (617)
++++++++++.++.+. ...|....+ .++.+++.+. + . . ..|||||+||||++++|++++..+. ....
T Consensus 81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~---~~~~ 157 (487)
T COG0297 81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYR---SGYI 157 (487)
T ss_pred CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhccc---cccc
Confidence 3999999999888752 133433322 2333333211 1 1 1 4799999999999999999987431 1367
Q ss_pred ceEEEEEeCCcccCCCCCCcccccCCCccccc--cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcc
Q 007130 424 TRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLD--LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGL 501 (617)
Q Consensus 424 iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~--~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL 501 (617)
+|.|+|+||+.|||.++......++||...+. .+.+++ ..+++|.++.+||+|+|||+.|++++.+.++|+|+
T Consensus 158 i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~-----~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl 232 (487)
T COG0297 158 IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYG-----QISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGL 232 (487)
T ss_pred CCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecC-----cchhhhhhheeccEEEEECHHHHHhhccccccccc
Confidence 99999999999999998555566788864443 233342 35789999999999999999999999988999999
Q ss_pred ccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCcccc
Q 007130 502 HNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQK 581 (617)
Q Consensus 502 ~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qK 581 (617)
+.++.....++.+|.||||.+.|+|.+|..+. .+|+.+++. .|..+|..|++++|++.+.+.|+|++||||+.||
T Consensus 233 ~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~----~~y~~~~~~-~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QK 307 (487)
T COG0297 233 EGLLSWRSGKLSGILNGIDYDLWNPETDPYIA----ANYSAEVLP-AKAENKVALQERLGLDVDLPGPLFGFVSRLTAQK 307 (487)
T ss_pred hhhhhhccccEEEEEeeEEecccCcccccchh----ccCCccchh-hhHHHHHHHHHHhCCCCCCCCcEEEEeecccccc
Confidence 99988888999999999999999999887664 678877764 4889999999999999777889999999999999
Q ss_pred CHHHHHHHHHhccCCCcEEEEEecChhhhHHHHHhC
Q 007130 582 GVDLIAEAIPWMMGQDVQLSHVGHWQTRFGRDAEEL 617 (617)
Q Consensus 582 GvdlLIeA~~~L~~~dv~LVIvG~G~~~~e~~l~~L 617 (617)
|+|++++|+..++...+||||+|.|++.+|..++.|
T Consensus 308 G~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~l 343 (487)
T COG0297 308 GLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRAL 343 (487)
T ss_pred chhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHH
Confidence 999999999999988899999999999999887653
No 8
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=2.7e-39 Score=357.56 Aligned_cols=327 Identities=38% Similarity=0.591 Sum_probs=243.3
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcc----eeEeeccccceEEEEEeeeCC
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR----KRYRVDRQDIEVAYFQAYIDG 354 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~----~~~~~~g~~~~~~v~~~~~~g 354 (617)
||+||++|++|+.++||+|+++.+|+++|+++||+|+|++|.|+........... ..+.+.+....++++....+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 6999999999999999999999999999999999999999999875432111110 012345566778888888999
Q ss_pred cEEEEecCccccccCC----CcCCCCCC-ccccccccc---ccc--CCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCc
Q 007130 355 VDFVFLDSPLFRHLGN----NIYGGGRE-IPWYVPCGG---VCY--GDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYT 424 (617)
Q Consensus 355 V~v~~i~~p~~~~~~~----~iy~~~~~-~~~~l~~~~---v~~--~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~i 424 (617)
|++|++++|.++.+.. ..|..... .++.+++.+ ++. +.+|||||+|||++++++.+++..+.. ..+.++
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~-~~~~~~ 159 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYAD-PFFKNI 159 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhcc-ccCCCC
Confidence 9999999988765421 11222211 122222221 222 478999999999999999888765432 223589
Q ss_pred eEEEEEeCCcccCCCCCCcccccCCCcc-cc--ccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcc
Q 007130 425 RSLLVIHNIAHQGRGPVSDFVYTDLPGH-YL--DLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGL 501 (617)
Q Consensus 425 PvV~TiH~~~~qg~~p~~~~~~~glp~~-~~--~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL 501 (617)
|+|+|+|++.++|.++...+...+++.. .+ ....++ ..+++++.++..||.|++||+.+++++.+..+|+|+
T Consensus 160 ~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl 234 (476)
T cd03791 160 KTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFY-----GQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGL 234 (476)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccC-----CcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcch
Confidence 9999999998988776544333333221 11 011111 246789999999999999999999999877777787
Q ss_pred ccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCcccc
Q 007130 502 HNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQK 581 (617)
Q Consensus 502 ~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qK 581 (617)
..++..+..++.+|+||||.+.|.|..+..+. .+|+.+. ..++..+|..+++++|++.+++.++|+|+|||.++|
T Consensus 235 ~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~----~~~~~~~-~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~K 309 (476)
T cd03791 235 DGLLRARAGKLSGILNGIDYDVWNPATDPHLP----ANYSADD-LEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQK 309 (476)
T ss_pred HHHHHhccCCeEEEeCCCcCcccCccccchhh----hcCCccc-cccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccc
Confidence 77766667899999999999999987654332 3454333 246788999999999997556889999999999999
Q ss_pred CHHHHHHHHHhccCCCcEEEEEecChhhhHHHHHh
Q 007130 582 GVDLIAEAIPWMMGQDVQLSHVGHWQTRFGRDAEE 616 (617)
Q Consensus 582 GvdlLIeA~~~L~~~dv~LVIvG~G~~~~e~~l~~ 616 (617)
|+++|++|++.+.+.+++|+|+|+|++.+++.+++
T Consensus 310 g~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~ 344 (476)
T cd03791 310 GIDLLLEALPELLELGGQLVILGSGDPEYEEALRE 344 (476)
T ss_pred cHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHH
Confidence 99999999999887789999999998776666554
No 9
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.97 E-value=7.2e-32 Score=274.97 Aligned_cols=221 Identities=35% Similarity=0.597 Sum_probs=153.7
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CC-Ccce-------eEeeccccceEEEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQ-DT-GIRK-------RYRVDRQDIEVAYFQ 349 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~-~~-~~~~-------~~~~~g~~~~~~v~~ 349 (617)
|||||+.||+|+.++||+|+++..|+++|+++||+|.||+|.|+...+.. .. .+.. .+.+.. .+.+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 79999999999999999999999999999999999999999996543221 00 0000 111222 25678888
Q ss_pred eeeCCcEEEEecCccccccCCCcCCCC-----C-Ccccccccccc---cc--CCCCcEEEEcCcchhHHHHHHHHHhhhc
Q 007130 350 AYIDGVDFVFLDSPLFRHLGNNIYGGG-----R-EIPWYVPCGGV---CY--GDGNLVFIANDWHTALLPVYLKAYYRDN 418 (617)
Q Consensus 350 ~~~~gV~v~~i~~p~~~~~~~~iy~~~-----~-~~~~~l~~~~v---~~--~~~pDIIHaHd~~tal~~~~l~~~~~~~ 418 (617)
...+||++|+++++.|+.+. .+|+.. . ..++.++|+++ +. +.+|||||||||+++++|++++..++.+
T Consensus 80 ~~~~~v~v~~i~~~~~f~r~-~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~ 158 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDRP-GIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQD 158 (245)
T ss_dssp EEETTEEEEEEESHHHHGSS-SSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS-
T ss_pred EEcCCccEEEecChhhcccc-ceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccc
Confidence 88999999999999998764 588652 1 12344444332 22 3589999999999999999999876555
Q ss_pred cCCCCceEEEEEeCCcccCCCCCCcccccCCCccccc---cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhh
Q 007130 419 GLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLD---LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTA 495 (617)
Q Consensus 419 ~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~---~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~ 495 (617)
+.+.++|+|+|+||+.|||.++...+..+|+|+..+. .+++++ .+|+++.|+..||+|+|||+.|+++|.+.
T Consensus 159 ~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~-----~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 159 PFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYG-----QINFLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp -----SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETT-----EEEHHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred cccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccccccccc-----ccCHHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 5566899999999999999998777777888765432 223332 56899999999999999999999999998
Q ss_pred hcCCccccccc
Q 007130 496 EGGWGLHNIIN 506 (617)
Q Consensus 496 ~~G~gL~~~l~ 506 (617)
.+|.||+.+|+
T Consensus 234 ~~g~GL~~~l~ 244 (245)
T PF08323_consen 234 EFGEGLEGLLR 244 (245)
T ss_dssp HHHTT-HHHHH
T ss_pred ccCCChHHHhc
Confidence 88889987763
No 10
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.95 E-value=1.6e-27 Score=269.53 Aligned_cols=330 Identities=22% Similarity=0.239 Sum_probs=229.9
Q ss_pred EEEEcCccC-----CCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC-CCCCC--------------CC---------
Q 007130 280 VILVAAECG-----PWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN-YAEPQ--------------DT--------- 330 (617)
Q Consensus 280 IL~Vt~e~~-----P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~-~~~~~--------------~~--------- 330 (617)
|++++.||. |. ..||+|+.+.+..++++.+|...+.++..|.. +..+. ..
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 577888874 64 78999999999999999999999999877642 11110 00
Q ss_pred ---C--cceeEeeccccceEEEEEeeeCCcEEEEecCcc----ccccC--CCcCCCCCCccc---cccccc---cc--cC
Q 007130 331 ---G--IRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPL----FRHLG--NNIYGGGREIPW---YVPCGG---VC--YG 391 (617)
Q Consensus 331 ---~--~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~----~~~~~--~~iy~~~~~~~~---~l~~~~---v~--~~ 391 (617)
| +...+.++|....+++|...++++++|+++++. ++.+. ..+|+.....++ .+++.+ .+ .+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~D~~~R~~Qe~fl~~a~l~~l~~l~ 159 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGGDKEMRIAQEIVLGIGGVRALRALG 159 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 012334566677889999888999999998764 55442 136765432222 222211 12 24
Q ss_pred CCCcEEEEcCcchhHHHHHHHHHhhhcc-------CCCCceEEEEEeCCcccCC--CCCCccc--------ccCCCcccc
Q 007130 392 DGNLVFIANDWHTALLPVYLKAYYRDNG-------LMQYTRSLLVIHNIAHQGR--GPVSDFV--------YTDLPGHYL 454 (617)
Q Consensus 392 ~~pDIIHaHd~~tal~~~~l~~~~~~~~-------~~~~iPvV~TiH~~~~qg~--~p~~~~~--------~~glp~~~~ 454 (617)
.+|||||+||||++++++++.+.....+ ...+..+|||+|++.+||. ||...+. .++++...+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 6899999999999999988744311100 0125779999999999997 8866542 245655443
Q ss_pred ccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCcccccccc
Q 007130 455 DLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTS 534 (617)
Q Consensus 455 ~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~ 534 (617)
..+....+.....+++++.|+..||.|.+||+.+++-... .++ .+.+.+.....++..|.||||+..|.|..+..+.
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~-l~~-~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~- 316 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRK-MWQ-FLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLY- 316 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHH-HHH-hhhhhcccccCCccceeCCccccccCCHHHHHHH-
Confidence 2221110000125789999999999999999999874332 122 1223333345679999999999999987765553
Q ss_pred CCCCcccccc---------------------ccCCchHHHHHHHH---------------------HhCCCCCCCCcEEE
Q 007130 535 DGYTNYCLDT---------------------LHTGKPQCKAALQR---------------------EFGLPVRDDVPVIG 572 (617)
Q Consensus 535 ~~~~~~~~e~---------------------~~~~k~~~K~~Lr~---------------------~lGl~~~~d~~vIl 572 (617)
.+|..++ ++.+|..||++|++ ++|++.+++.++|+
T Consensus 317 ---~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig 393 (601)
T TIGR02094 317 ---ERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIG 393 (601)
T ss_pred ---HHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEE
Confidence 3444333 55688999999987 57777778999999
Q ss_pred EEeCCccccCHHHHHHHHHhccC------CCcEEEEEecChhh------hHHHHHh
Q 007130 573 FIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHWQTR------FGRDAEE 616 (617)
Q Consensus 573 fVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G~~~------~e~~l~~ 616 (617)
||+||+.|||+++++.++.++.+ .+++|||+|.|.+. +++.+.+
T Consensus 394 ~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~ 449 (601)
T TIGR02094 394 FARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVE 449 (601)
T ss_pred EEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHH
Confidence 99999999999999999988863 48999999999876 7777654
No 11
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.90 E-value=4.1e-23 Score=237.87 Aligned_cols=330 Identities=21% Similarity=0.227 Sum_probs=217.4
Q ss_pred cEEEEEcCccC-----CCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC-CCCC--------------CCC-------
Q 007130 278 MNVILVAAECG-----PWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN-YAEP--------------QDT------- 330 (617)
Q Consensus 278 MKIL~Vt~e~~-----P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~-~~~~--------------~~~------- 330 (617)
.-|++++.||. |. ..||+|+.+.+..++++.+|..++.|...|.. +..+ .+.
T Consensus 86 ~~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~ 164 (778)
T cd04299 86 LVAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEP 164 (778)
T ss_pred CeeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEE
Confidence 34569999984 64 78999999999999999999999999876542 2111 000
Q ss_pred -----C--cceeEeeccccceEEEEEeeeCCcEEEEecCccc----cccC--CCcCCCCCCccc---ccccc---ccc--
Q 007130 331 -----G--IRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLF----RHLG--NNIYGGGREIPW---YVPCG---GVC-- 389 (617)
Q Consensus 331 -----~--~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~~----~~~~--~~iy~~~~~~~~---~l~~~---~v~-- 389 (617)
| +...+.++|....++++...+.+|++|+++.+.+ +.+. ..+|+...+.++ .+++. +++
T Consensus 165 ~~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~D~~~Rl~Qe~~Lg~agl~~Lr~ 244 (778)
T cd04299 165 VRDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGGDQETRIQQEILLGIGGVRALRA 244 (778)
T ss_pred EecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1223446777778899999899999999987652 3332 246865543332 22221 112
Q ss_pred cCCCCcEEEEcCcchhHHHHHHHHHhhh-ccC-------CCCceEEEEEeCCcccC--CCCCCccc--------ccCCCc
Q 007130 390 YGDGNLVFIANDWHTALLPVYLKAYYRD-NGL-------MQYTRSLLVIHNIAHQG--RGPVSDFV--------YTDLPG 451 (617)
Q Consensus 390 ~~~~pDIIHaHd~~tal~~~~l~~~~~~-~~~-------~~~iPvV~TiH~~~~qg--~~p~~~~~--------~~glp~ 451 (617)
.+..|||||+||||++++++.+.+.+.+ .+. ..+..+|||+|++.++| .||...+. .+|++.
T Consensus 245 lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~ 324 (778)
T cd04299 245 LGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSR 324 (778)
T ss_pred hCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCH
Confidence 2458999999999999999843322111 000 23578999999999999 78866542 245554
Q ss_pred cccccccccCC-CCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCC-Cccc
Q 007130 452 HYLDLFKLYDP-VGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWS-PMYD 529 (617)
Q Consensus 452 ~~~~~l~~~d~-~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~-P~~d 529 (617)
..+..+....+ ..+..++|.+.|++.|+.|.+||+-+....++ .+. ++.+-+.....+|..|.||||+..|. |..+
T Consensus 325 ~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~-~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~ 402 (778)
T cd04299 325 DRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MFA-GLWPGFPVEEVPIGHVTNGVHVPTWVAPEMR 402 (778)
T ss_pred HHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-Hhh-hhhccCCcccCceeceeCCcchhhhcCHHHH
Confidence 43322211110 00125799999999999999999987332222 111 01111111356799999999999997 7655
Q ss_pred ccccc----CCCCc------------cccccccCCchHHHHHHHHHh---------------------CCCCCCCCcEEE
Q 007130 530 IHLTS----DGYTN------------YCLDTLHTGKPQCKAALQREF---------------------GLPVRDDVPVIG 572 (617)
Q Consensus 530 ~~l~~----~~~~~------------~~~e~~~~~k~~~K~~Lr~~l---------------------Gl~~~~d~~vIl 572 (617)
..+.. ++..+ ...++++..|..+|++|.+.. +.+.+++.++|+
T Consensus 403 ~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltig 482 (778)
T cd04299 403 ELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIG 482 (778)
T ss_pred HHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEe
Confidence 44310 11111 112335667888888886553 445667889999
Q ss_pred EEeCCccccCHHHHHHHHHhccC------CCcEEEEEecChhhh
Q 007130 573 FIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHWQTRF 610 (617)
Q Consensus 573 fVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G~~~~ 610 (617)
|++||..+||.++|+..+.++.+ .+++|||+|.|.+.+
T Consensus 483 farRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d 526 (778)
T cd04299 483 FARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPAD 526 (778)
T ss_pred eeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccc
Confidence 99999999999999999888743 489999999998433
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.89 E-value=6.5e-22 Score=215.06 Aligned_cols=268 Identities=19% Similarity=0.204 Sum_probs=166.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC--CCCCCCCCCCCcceeEeeccccceEEEEEeeeCCc
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH--YGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~--y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV 355 (617)
|||++|+..|+|. .||++.++.+|+++|.++||+|+|+|+. ++.... ..+ + ++. .+.....+|+
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~--~~~----~--~~~----~~~~~~~~~i 66 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRV--GEG----Y--SAW----RYRRESEGGV 66 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCC--Ccc----c--ccc----cceeeecCCe
Confidence 8999999999994 8999999999999999999999999975 222110 000 0 000 0011234677
Q ss_pred EEEEecCccccccCCCcCCCCC-Cccccccc-cccc--cCCCCcEEEEcCcch--hHHHHHHHHHhhhccCCCCceEEEE
Q 007130 356 DFVFLDSPLFRHLGNNIYGGGR-EIPWYVPC-GGVC--YGDGNLVFIANDWHT--ALLPVYLKAYYRDNGLMQYTRSLLV 429 (617)
Q Consensus 356 ~v~~i~~p~~~~~~~~iy~~~~-~~~~~l~~-~~v~--~~~~pDIIHaHd~~t--al~~~~l~~~~~~~~~~~~iPvV~T 429 (617)
+++++....... ...+.... ...|.+.+ ..+. ...+|||||+|.+.. ++++.+++. ..++|+|++
T Consensus 67 ~v~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~-------~~~~~~v~~ 137 (412)
T PRK10307 67 TVWRCPLYVPKQ--PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLAR-------LSGARTWLH 137 (412)
T ss_pred EEEEccccCCCC--ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHH-------hhCCCEEEE
Confidence 777764311000 00000000 00011000 0011 126899999997542 223333332 357899999
Q ss_pred EeCCcccCCCCCCcccccCC-CccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccC
Q 007130 430 IHNIAHQGRGPVSDFVYTDL-PGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEV 508 (617)
Q Consensus 430 iH~~~~qg~~p~~~~~~~gl-p~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~ 508 (617)
+|+...+ . +...+. ....+. ++ ...++++.++.||.||++|+.+++.+.. .| .+
T Consensus 138 ~~d~~~~-----~-~~~~~~~~~~~~~--~~-------~~~~~~~~~~~ad~ii~~S~~~~~~~~~--~~--------~~ 192 (412)
T PRK10307 138 IQDYEVD-----A-AFGLGLLKGGKVA--RL-------ATAFERSLLRRFDNVSTISRSMMNKARE--KG--------VA 192 (412)
T ss_pred eccCCHH-----H-HHHhCCccCcHHH--HH-------HHHHHHHHHhhCCEEEecCHHHHHHHHH--cC--------CC
Confidence 9984211 0 000111 000100 00 1236778889999999999999888764 22 14
Q ss_pred CCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHH
Q 007130 509 DWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAE 588 (617)
Q Consensus 509 ~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIe 588 (617)
..++.+||||||.+.|.|... ..+..+++.++++ ++.++|+|+||+.++||++.|++
T Consensus 193 ~~~i~vi~ngvd~~~~~~~~~---------------------~~~~~~~~~~~~~--~~~~~i~~~G~l~~~kg~~~li~ 249 (412)
T PRK10307 193 AEKVIFFPNWSEVARFQPVAD---------------------ADVDALRAQLGLP--DGKKIVLYSGNIGEKQGLELVID 249 (412)
T ss_pred cccEEEECCCcCHhhcCCCCc---------------------cchHHHHHHcCCC--CCCEEEEEcCccccccCHHHHHH
Confidence 678999999999988865311 0123467788886 45689999999999999999999
Q ss_pred HHHhccC-CCcEEEEEecCh--hhhHHHHHh
Q 007130 589 AIPWMMG-QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 589 A~~~L~~-~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
|++.+.+ .+++|+|+|+|+ ..+++++++
T Consensus 250 a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~ 280 (412)
T PRK10307 250 AARRLRDRPDLIFVICGQGGGKARLEKMAQC 280 (412)
T ss_pred HHHHhccCCCeEEEEECCChhHHHHHHHHHH
Confidence 9998855 379999999997 455555543
No 13
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.87 E-value=4.1e-21 Score=205.59 Aligned_cols=239 Identities=22% Similarity=0.203 Sum_probs=154.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
|||++|+..|+|. ..||+++++.+|+++|.++ |+|.|++....... .+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~--------------------------~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRFD--------------------------SEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchhc--------------------------CCCeEE
Confidence 8999999999885 4699999999999999987 78888875432110 122333
Q ss_pred EEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 358 VFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 358 ~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
+.+..+.... ............+ .......++||||+|.|.+++++.+++. +.++|+|+|+|+.....
T Consensus 53 ~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~divh~~~~~~~~~~~~~~~-------~~~~p~v~~~h~~~~~~ 120 (388)
T TIGR02149 53 KGYRPWSELK---EANKALGTFSVDL--AMANDPVDADVVHSHTWYTFLAGHLAKK-------LYDKPLVVTAHSLEPLR 120 (388)
T ss_pred EEecChhhcc---chhhhhhhhhHHH--HHhhCCCCCCeEeecchhhhhHHHHHHH-------hcCCCEEEEeecccccc
Confidence 3221111000 0000000000000 0011234699999999887766554433 36899999999953211
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
.+.... .+.. +.+ ...+++.+++.||.||++|+.+++.+.....|. ...++.+|||
T Consensus 121 ~~~~~~---~~~~------~~~-------~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~--------~~~~i~vi~n 176 (388)
T TIGR02149 121 PWKEEQ---LGGG------YKL-------SSWAEKTAIEAADRVIAVSGGMREDILKYYPDL--------DPEKVHVIYN 176 (388)
T ss_pred cccccc---cccc------hhH-------HHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCC--------CcceEEEecC
Confidence 111000 0000 000 123567788999999999999988876531121 3578999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCC
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQD 597 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~d 597 (617)
|+|.+.|.|.. +..++.+++++ .+.++|+|+||+.++||++.|++|++.+. .+
T Consensus 177 g~~~~~~~~~~------------------------~~~~~~~~~~~--~~~~~i~~~Grl~~~Kg~~~li~a~~~l~-~~ 229 (388)
T TIGR02149 177 GIDTKEYKPDD------------------------GNVVLDRYGID--RSRPYILFVGRITRQKGVPHLLDAVHYIP-KD 229 (388)
T ss_pred CCChhhcCCCc------------------------hHHHHHHhCCC--CCceEEEEEcccccccCHHHHHHHHHHHh-hc
Confidence 99998886531 13467788885 46789999999999999999999999875 47
Q ss_pred cEEEEEecCh
Q 007130 598 VQLSHVGHWQ 607 (617)
Q Consensus 598 v~LVIvG~G~ 607 (617)
++|+|+|+|+
T Consensus 230 ~~l~i~g~g~ 239 (388)
T TIGR02149 230 VQVVLCAGAP 239 (388)
T ss_pred CcEEEEeCCC
Confidence 8999998865
No 14
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.87 E-value=2.7e-20 Score=206.37 Aligned_cols=241 Identities=15% Similarity=0.221 Sum_probs=151.3
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCC
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDG 354 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~g 354 (617)
.++|||++++.. .|+...||++.++.+|+++|.++||+|+|+++.... ... ..|
T Consensus 56 ~~~mrI~~~~~~-~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEP-SPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECC-cCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 678999999853 344468999999999999999999999999976432 110 011
Q ss_pred cEEEEe---cCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHH-HHHHHHHhhhccCCCCceEEEEE
Q 007130 355 VDFVFL---DSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALL-PVYLKAYYRDNGLMQYTRSLLVI 430 (617)
Q Consensus 355 V~v~~i---~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~-~~~l~~~~~~~~~~~~iPvV~Ti 430 (617)
+.++.+ ..+.+.. ..+... .... ...++...+|||||+|+...... ++++.. ..++|+|+|+
T Consensus 110 ~~v~~~~~~~~~~~~~---~~~~~~--~~~~--l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak-------~~~ip~V~~~ 175 (465)
T PLN02871 110 AKVIGSWSFPCPFYQK---VPLSLA--LSPR--IISEVARFKPDLIHASSPGIMVFGALFYAK-------LLCVPLVMSY 175 (465)
T ss_pred ceeeccCCcCCccCCC---ceeecc--CCHH--HHHHHHhCCCCEEEECCCchhHHHHHHHHH-------HhCCCEEEEE
Confidence 111111 0111100 000000 0001 12344567899999998543222 222222 2578999999
Q ss_pred eCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCC
Q 007130 431 HNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDW 510 (617)
Q Consensus 431 H~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~ 510 (617)
|+.... ..+. ..+.. .. + ..+.++++.++.+|.|+++|+.+++.+... |. .+..
T Consensus 176 h~~~~~-~~~~-----~~~~~-~~---~-------~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~--~~-------~~~~ 229 (465)
T PLN02871 176 HTHVPV-YIPR-----YTFSW-LV---K-------PMWDIIRFLHRAADLTLVTSPALGKELEAA--GV-------TAAN 229 (465)
T ss_pred ecCchh-hhhc-----ccchh-hH---H-------HHHHHHHHHHhhCCEEEECCHHHHHHHHHc--CC-------CCcC
Confidence 984210 0110 00000 00 0 012345677889999999999999888742 21 1357
Q ss_pred cEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHH
Q 007130 511 KLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAI 590 (617)
Q Consensus 511 kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~ 590 (617)
++.+|+||||.+.|.|..+ . ..++.++... .++.++|+|+|||.++||++.|++|+
T Consensus 230 kv~vi~nGvd~~~f~p~~~-------------------~----~~~~~~~~~~-~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 230 RIRVWNKGVDSESFHPRFR-------------------S----EEMRARLSGG-EPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred eEEEeCCccCccccCCccc-------------------c----HHHHHHhcCC-CCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 8999999999999977421 0 1244444322 13578999999999999999999999
Q ss_pred HhccCCCcEEEEEecCh
Q 007130 591 PWMMGQDVQLSHVGHWQ 607 (617)
Q Consensus 591 ~~L~~~dv~LVIvG~G~ 607 (617)
+.+. +++|+|+|+|+
T Consensus 286 ~~~~--~~~l~ivG~G~ 300 (465)
T PLN02871 286 ERLP--GARLAFVGDGP 300 (465)
T ss_pred HhCC--CcEEEEEeCCh
Confidence 8874 89999999997
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.86 E-value=1.5e-20 Score=203.83 Aligned_cols=239 Identities=20% Similarity=0.224 Sum_probs=153.8
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|+..|.|. .||+++++..|+++|+++||+|+|+++.++..... . ...+|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-------~--------------~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI-------R--------------YLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc-------c--------------cccCceeEE
Confidence 799999999995 89999999999999999999999999865422100 0 012345555
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHH--HHHHHHhhhccCCCCceEEEEEeCCccc
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLP--VYLKAYYRDNGLMQYTRSLLVIHNIAHQ 436 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~--~~l~~~~~~~~~~~~iPvV~TiH~~~~q 436 (617)
.++...... ...+... ..+.......+...+|||||+|++...+.. .++.+ ..++|+|+|.|+..
T Consensus 58 ~~p~~~~~~--~~~~~~~--~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~-------~~~~~~v~t~h~~~-- 124 (398)
T cd03796 58 YLPFVVFYN--QSTLPTF--FGTFPLLRNILIRERITIVHGHQAFSALAHEALLHAR-------TMGLKTVFTDHSLF-- 124 (398)
T ss_pred EecceeccC--Cccccch--hhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhh-------hcCCcEEEEecccc--
Confidence 443211110 0000000 000000122334568999999987654332 22211 36789999999841
Q ss_pred CCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEe
Q 007130 437 GRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIV 516 (617)
Q Consensus 437 g~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIp 516 (617)
+..... ... ...+++..++.+|.||++|+.+.+.+... .+ .+..++.+||
T Consensus 125 ---~~~~~~-----~~~-------------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~--------~~~~k~~vi~ 174 (398)
T cd03796 125 ---GFADAS-----SIH-------------TNKLLRFSLADVDHVICVSHTSKENTVLR-AS--------LDPERVSVIP 174 (398)
T ss_pred ---cccchh-----hHH-------------hhHHHHHhhccCCEEEEecHhHhhHHHHH-hC--------CChhhEEEEc
Confidence 110000 000 01244667789999999999887654321 12 1467899999
Q ss_pred cCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC-
Q 007130 517 NGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG- 595 (617)
Q Consensus 517 NGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~- 595 (617)
||+|.+.|.|..+ + . .++.++|+|+||+.++||++.|++|++.+.+
T Consensus 175 ngvd~~~f~~~~~-------------------~------------~--~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~ 221 (398)
T cd03796 175 NAVDSSDFTPDPS-------------------K------------R--DNDKITIVVISRLVYRKGIDLLVGIIPEICKK 221 (398)
T ss_pred CccCHHHcCCCcc-------------------c------------C--CCCceEEEEEeccchhcCHHHHHHHHHHHHhh
Confidence 9999988866321 0 0 1356899999999999999999999998764
Q ss_pred -CCcEEEEEecCh--hhhHHHHHh
Q 007130 596 -QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 596 -~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
.+++|+|+|+|+ ..+++.+++
T Consensus 222 ~~~~~l~i~G~g~~~~~l~~~~~~ 245 (398)
T cd03796 222 HPNVRFIIGGDGPKRILLEEMREK 245 (398)
T ss_pred CCCEEEEEEeCCchHHHHHHHHHH
Confidence 489999999997 345555543
No 16
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.85 E-value=1.3e-20 Score=203.84 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=156.1
Q ss_pred EEEEcCccCCCC-----CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCC
Q 007130 280 VILVAAECGPWS-----KTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDG 354 (617)
Q Consensus 280 IL~Vt~e~~P~~-----~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~g 354 (617)
|++++....|+. ..||+++++.+|+++|+++||+|+|+|+........ . + ...+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~-~------~-------------~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP-V------V-------------EVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC-c------c-------------ccCCC
Confidence 577887777762 269999999999999999999999999764321110 0 0 11345
Q ss_pred cEEEEecCccccccCCCcCCC-CCCccccccccccc--cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEe
Q 007130 355 VDFVFLDSPLFRHLGNNIYGG-GREIPWYVPCGGVC--YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIH 431 (617)
Q Consensus 355 V~v~~i~~p~~~~~~~~iy~~-~~~~~~~l~~~~v~--~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH 431 (617)
+.++.+....+.......+.. ...+.+.+ ...++ ...+|||||+|+|.+++++.+++. ..++|+|+|+|
T Consensus 61 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~-------~~~~p~v~t~h 132 (405)
T TIGR03449 61 VRVRNVVAGPYEGLDKEDLPTQLCAFTGGV-LRAEARHEPGYYDLIHSHYWLSGQVGWLLRD-------RWGVPLVHTAH 132 (405)
T ss_pred cEEEEecCCCcccCCHHHHHHHHHHHHHHH-HHHHhhccCCCCCeEEechHHHHHHHHHHHH-------hcCCCEEEecc
Confidence 666655332221100000000 00000000 00111 134799999999887776666543 35789999999
Q ss_pred CCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCc
Q 007130 432 NIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWK 511 (617)
Q Consensus 432 ~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~k 511 (617)
++.... . ..+.....+... ....+++..++.+|.|+++|+...+.+... +| .+..+
T Consensus 133 ~~~~~~--~-~~~~~~~~~~~~------------~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-~~--------~~~~k 188 (405)
T TIGR03449 133 TLAAVK--N-AALADGDTPEPE------------ARRIGEQQLVDNADRLIANTDEEARDLVRH-YD--------ADPDR 188 (405)
T ss_pred chHHHH--H-HhccCCCCCchH------------HHHHHHHHHHHhcCeEEECCHHHHHHHHHH-cC--------CChhh
Confidence 853210 0 000000000000 011234667889999999999888877642 22 14578
Q ss_pred EEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHH
Q 007130 512 LSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIP 591 (617)
Q Consensus 512 I~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~ 591 (617)
+.+|+||||.+.|.|.. +..++++++++ .+.++|+|+||+.++||++.|++|++
T Consensus 189 i~vi~ngvd~~~~~~~~------------------------~~~~~~~~~~~--~~~~~i~~~G~l~~~K~~~~li~a~~ 242 (405)
T TIGR03449 189 IDVVAPGADLERFRPGD------------------------RATERARLGLP--LDTKVVAFVGRIQPLKAPDVLLRAVA 242 (405)
T ss_pred EEEECCCcCHHHcCCCc------------------------HHHHHHhcCCC--CCCcEEEEecCCCcccCHHHHHHHHH
Confidence 99999999998886531 12356778875 46789999999999999999999999
Q ss_pred hccCC--C--cEEEEEec
Q 007130 592 WMMGQ--D--VQLSHVGH 605 (617)
Q Consensus 592 ~L~~~--d--v~LVIvG~ 605 (617)
.+.+. + ++|+|+|+
T Consensus 243 ~l~~~~~~~~~~l~ivG~ 260 (405)
T TIGR03449 243 ELLDRDPDRNLRVIVVGG 260 (405)
T ss_pred HHHhhCCCcceEEEEEeC
Confidence 88652 3 99999996
No 17
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.85 E-value=3.9e-20 Score=203.69 Aligned_cols=259 Identities=18% Similarity=0.118 Sum_probs=146.8
Q ss_pred CCCcHHHHHHHHHHHHHHCCC--eEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEEecCccccccC
Q 007130 292 KTGGLGDVAGALPKALARRGH--RVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLG 369 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~Gh--eV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~~~~~~ 369 (617)
..||+++++.+|+++|+++|| +|+|+|..++...-.... .. . .....+|+++++++........
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~--~~-----------~-~~~~~~gv~v~r~~~~~~~~~~ 89 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDY--AQ-----------P-IERIAPGARIVRLPFGPRRYLR 89 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCcc--CC-----------C-eeEeCCCcEEEEecCCCCCCcC
Confidence 589999999999999999997 999999765421000000 00 0 1123467888777532110000
Q ss_pred -CCcCCCCCCcccccccccccc--CCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccc
Q 007130 370 -NNIYGGGREIPWYVPCGGVCY--GDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVY 446 (617)
Q Consensus 370 -~~iy~~~~~~~~~l~~~~v~~--~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~ 446 (617)
.........+.+.+ ..++. ..+|||||+|+|.+++++.+++. ..++|+|+|+|+..... ...+..
T Consensus 90 ~~~~~~~~~~~~~~l--~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~-------~~~~p~V~t~H~~~~~~---~~~~~~ 157 (439)
T TIGR02472 90 KELLWPYLDELADNL--LQHLRQQGHLPDLIHAHYADAGYVGARLSR-------LLGVPLIFTGHSLGREK---RRRLLA 157 (439)
T ss_pred hhhhhhhHHHHHHHH--HHHHHHcCCCCCEEEEcchhHHHHHHHHHH-------HhCCCEEEecccccchh---hhhccc
Confidence 00000000000011 11222 23799999999887777766554 25789999999852210 000101
Q ss_pred cCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCC
Q 007130 447 TDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSP 526 (617)
Q Consensus 447 ~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P 526 (617)
.++....+. +.+. ....+.+++..++.||+||++|.....+......| .+..++.+||||||++.|.|
T Consensus 158 ~~~~~~~~~--~~~~--~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------~~~~ki~vIpnGvd~~~f~~ 225 (439)
T TIGR02472 158 AGLKPQQIE--KQYN--ISRRIEAEEETLAHASLVITSTHQEIEEQYALYDS--------YQPERMQVIPPGVDLSRFYP 225 (439)
T ss_pred CCCChhhhh--hhcc--hHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccC--------CCccceEEECCCcChhhcCC
Confidence 111110000 0000 00123356778999999999997655443322112 25689999999999999977
Q ss_pred ccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEE-EEE
Q 007130 527 MYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQL-SHV 603 (617)
Q Consensus 527 ~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~L-VIv 603 (617)
.... ......+..+ ++++.+ ++.++|+|+|||.++||++.|++|++.+.. .+.++ +|+
T Consensus 226 ~~~~----------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~ 286 (439)
T TIGR02472 226 PQSS----------------EETSEIDNLL-APFLKD--PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVL 286 (439)
T ss_pred CCcc----------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEe
Confidence 4210 0111122223 334443 356899999999999999999999986432 23444 467
Q ss_pred ecCh
Q 007130 604 GHWQ 607 (617)
Q Consensus 604 G~G~ 607 (617)
|+|+
T Consensus 287 G~g~ 290 (439)
T TIGR02472 287 GCRD 290 (439)
T ss_pred CCcc
Confidence 8875
No 18
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=9.4e-20 Score=193.18 Aligned_cols=236 Identities=20% Similarity=0.182 Sum_probs=149.3
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
|||++++ +| ..||+++++.+|+++|+++||+|+|++...+..... ...++.+
T Consensus 1 mki~~~~---~p--~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~-----------------------~~~~~~~ 52 (371)
T cd04962 1 MKIGIVC---YP--TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDE-----------------------YSPNIFF 52 (371)
T ss_pred CceeEEE---Ee--CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhh-----------------------hccCeEE
Confidence 8999997 35 379999999999999999999999998653311100 0011111
Q ss_pred EEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 358 VFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 358 ~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
+.++.+.+.......|.. ..... ....+...+|||||+|.+....++.++...... ..++|+|+|+|+.....
T Consensus 53 ~~~~~~~~~~~~~~~~~~--~~~~~--l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~h~~~~~~ 125 (371)
T cd04962 53 HEVEVPQYPLFQYPPYDL--ALASK--IAEVAKRYKLDLLHVHYAVPHAVAAYLAREILG---KKDLPVVTTLHGTDITL 125 (371)
T ss_pred EEecccccchhhcchhHH--HHHHH--HHHHHhcCCccEEeecccCCccHHHHHHHHhcC---cCCCcEEEEEcCCcccc
Confidence 111111000000000100 00000 012345678999999976544333333321110 13789999999853210
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
.+.... ...+++.+++.+|.|+++|+.+++.+.+. ++ ...++.+|+|
T Consensus 126 ---------~~~~~~--------------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~---------~~~~i~vi~n 172 (371)
T cd04962 126 ---------VGQDPS--------------FQPATRFSIEKSDGVTAVSESLRQETYEL-FD---------ITKEIEVIPN 172 (371)
T ss_pred ---------cccccc--------------chHHHHHHHhhCCEEEEcCHHHHHHHHHh-cC---------CcCCEEEecC
Confidence 000000 12356678889999999999988877642 21 3568999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC-
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ- 596 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~- 596 (617)
|+|...|.+.. +...+++++++ ++.++|+|+||+.++||++.|++|+..+.+.
T Consensus 173 ~~~~~~~~~~~------------------------~~~~~~~~~~~--~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~ 226 (371)
T cd04962 173 FVDEDRFRPKP------------------------DEALKRRLGAP--EGEKVLIHISNFRPVKRIDDVIRIFAKVRKEV 226 (371)
T ss_pred CcCHhhcCCCc------------------------hHHHHHhcCCC--CCCeEEEEecccccccCHHHHHHHHHHHHhcC
Confidence 99987775421 12245667775 4678999999999999999999999988654
Q ss_pred CcEEEEEecCh
Q 007130 597 DVQLSHVGHWQ 607 (617)
Q Consensus 597 dv~LVIvG~G~ 607 (617)
+++|+|+|.|+
T Consensus 227 ~~~l~i~G~g~ 237 (371)
T cd04962 227 PARLLLVGDGP 237 (371)
T ss_pred CceEEEEcCCc
Confidence 79999999996
No 19
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.82 E-value=2e-19 Score=207.15 Aligned_cols=293 Identities=16% Similarity=0.106 Sum_probs=162.2
Q ss_pred CcEEEEEcCcc----CCCC---CCCcHHHHHHHHHHHH--------HHCCC----eEEEEecCCCCCCCCCCCCcceeEe
Q 007130 277 VMNVILVAAEC----GPWS---KTGGLGDVAGALPKAL--------ARRGH----RVMVVAPHYGNYAEPQDTGIRKRYR 337 (617)
Q Consensus 277 ~MKIL~Vt~e~----~P~~---~~GGlg~~v~~LakaL--------a~~Gh----eV~Vv~p~y~~~~~~~~~~~~~~~~ 337 (617)
.|||+||+.+. .|.. .+||..+|+.+|+++| +++|| +|+|+|...+..... .-+.+. -.
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~-~~~~~~-e~ 332 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGT-TCNQRL-EK 332 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccc-cccccc-cc
Confidence 48999999987 2221 3799999999999985 68999 778999765421100 000000 00
Q ss_pred eccccceEEEEEeeeCCcEEEEecCccc--------cccCCCcCCCCCCccccccccccc--cCCCCcEEEEcCcchhHH
Q 007130 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLF--------RHLGNNIYGGGREIPWYVPCGGVC--YGDGNLVFIANDWHTALL 407 (617)
Q Consensus 338 ~~g~~~~~~v~~~~~~gV~v~~i~~p~~--------~~~~~~iy~~~~~~~~~l~~~~v~--~~~~pDIIHaHd~~tal~ 407 (617)
+. ..+|+.+++++.... ... ..+|.+...+...+ ...+. .+.+|||||+|.|.++++
T Consensus 333 ~~-----------~~~~~~I~rvp~g~~~~~~~~~~i~k-~~l~p~l~~f~~~~-~~~~~~~~~~~pDlIHahy~d~glv 399 (784)
T TIGR02470 333 VY-----------GTEHAWILRVPFRTENGIILRNWISR-FEIWPYLETFAEDA-EKEILAELQGKPDLIIGNYSDGNLV 399 (784)
T ss_pred cc-----------CCCceEEEEecCCCCcccccccccCH-HHHHHHHHHHHHHH-HHHHHHhcCCCCCEEEECCCchHHH
Confidence 00 124555555542110 000 00110000000000 00111 134799999999999999
Q ss_pred HHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCcccc-ccccccCCCCchhHHHHHHHHhhcCeeEEeCH
Q 007130 408 PVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYL-DLFKLYDPVGGEHFNIFAAGLKTADRVVTVSR 486 (617)
Q Consensus 408 ~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~-~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~ 486 (617)
+..++. ..++|.|.|.|.+.... .+. .++.+... ..+.+- ..+..+..+++.||+|||.|.
T Consensus 400 a~lla~-------~lgVP~v~t~HsL~~~K-~~~-----~g~~~~~~e~~~~~~-----~r~~ae~~~~~~AD~IItsT~ 461 (784)
T TIGR02470 400 ASLLAR-------KLGVTQCTIAHALEKTK-YPD-----SDIYWQEFEDKYHFS-----CQFTADLIAMNAADFIITSTY 461 (784)
T ss_pred HHHHHH-------hcCCCEEEECCcchhhc-ccc-----cccccccchhHHHhh-----hhhhHHHHHHhcCCEEEECcH
Confidence 877664 36899999999863221 111 11100000 000000 012234578889999999997
Q ss_pred HHHHHHHhhhcCC---------ccccc---cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHH
Q 007130 487 GYSWELKTAEGGW---------GLHNI---INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKA 554 (617)
Q Consensus 487 ~~a~~l~~~~~G~---------gL~~~---l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~ 554 (617)
............+ +|..+ ++.+..|+.+||+|||.+.|.|..+.........+ ..+++ --++.
T Consensus 462 qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~-~ie~l----l~~~~ 536 (784)
T TIGR02470 462 QEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHP-EIEEL----LFSLE 536 (784)
T ss_pred HHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhc-chhhh----ccchh
Confidence 5422111100000 11111 12245799999999999999874321000000000 00000 00233
Q ss_pred HHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc--CCCcEEEEEecCh
Q 007130 555 ALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM--GQDVQLSHVGHWQ 607 (617)
Q Consensus 555 ~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~--~~dv~LVIvG~G~ 607 (617)
+.++.+|+..++++++|++||||+++||++.|++|+..+. ..+++|||+|+|.
T Consensus 537 ~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~ 591 (784)
T TIGR02470 537 DNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKL 591 (784)
T ss_pred hHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCc
Confidence 4567888755578899999999999999999999998764 3479999999874
No 20
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.81 E-value=7.4e-19 Score=206.16 Aligned_cols=303 Identities=13% Similarity=0.076 Sum_probs=163.9
Q ss_pred CCcEEEEEcCccCCC---------CCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCCCC------CCCCCCCcceeEee
Q 007130 276 NVMNVILVAAECGPW---------SKTGGLGDVAGALPKALARRG--HRVMVVAPHYGNY------AEPQDTGIRKRYRV 338 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~---------~~~GGlg~~v~~LakaLa~~G--heV~Vv~p~y~~~------~~~~~~~~~~~~~~ 338 (617)
+.|.|+||+..-.|- ..+||..+||.+||++|+++| |+|+|+|...... .++.+. +.. ...
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~-~~~-~~~ 245 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEM-LTP-RSS 245 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccc-ccc-ccc
Confidence 348999998764431 358999999999999999998 8999999764321 111000 000 000
Q ss_pred ccccceEEEEEeeeCCcEEEEecCcc---ccccCCCcCCCCCCcccccc--ccc----cc------cCCCCcEEEEcCcc
Q 007130 339 DRQDIEVAYFQAYIDGVDFVFLDSPL---FRHLGNNIYGGGREIPWYVP--CGG----VC------YGDGNLVFIANDWH 403 (617)
Q Consensus 339 ~g~~~~~~v~~~~~~gV~v~~i~~p~---~~~~~~~iy~~~~~~~~~l~--~~~----v~------~~~~pDIIHaHd~~ 403 (617)
.+ ........+|+.+++++... |... ...+....++.-.+. ... +. ....|||||+|+|.
T Consensus 246 ~~----~~~~~~~~~g~rIvRip~GP~~~~l~K-e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~ 320 (1050)
T TIGR02468 246 EN----DGDEMGESSGAYIIRIPFGPRDKYIPK-EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD 320 (1050)
T ss_pred cc----ccccccCCCCeEEEEeccCCCCCCcCH-HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch
Confidence 00 00011234577777765321 1110 001111000000000 000 00 11249999999999
Q ss_pred hhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCC-CccccccccccCCCCchhHHHHHHHHhhcCeeE
Q 007130 404 TALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDL-PGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVV 482 (617)
Q Consensus 404 tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~gl-p~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VI 482 (617)
+++++..++. ..++|+|+|.|.+.-. -...+...|. +..-+. ..|. ....+..+..++..||+||
T Consensus 321 sG~aa~~L~~-------~lgVP~V~T~HSLgr~---K~~~ll~~g~~~~~~~~--~~y~--~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 321 AGDSAALLSG-------ALNVPMVLTGHSLGRD---KLEQLLKQGRMSKEEIN--STYK--IMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred HHHHHHHHHH-------hhCCCEEEECccchhh---hhhhhcccccccccccc--cccc--hHHHHHHHHHHHHhcCEEE
Confidence 9999888775 3689999999986211 0000000010 000000 0000 0013456788999999999
Q ss_pred EeCHHHHHHHHhhhcCCc--ccccc-----------ccCCCcEEEEecCCcCCCCCCccccccc-cCCCCccccccccCC
Q 007130 483 TVSRGYSWELKTAEGGWG--LHNII-----------NEVDWKLSGIVNGIDTKEWSPMYDIHLT-SDGYTNYCLDTLHTG 548 (617)
Q Consensus 483 aVS~~~a~~l~~~~~G~g--L~~~l-----------~~~~~kI~vIpNGID~~~f~P~~d~~l~-~~~~~~~~~e~~~~~ 548 (617)
|+|+..++++...+.++. |...| +....++.|||||||.+.|.|....... ..+-..+.. ..
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~----~~ 462 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPA----KP 462 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccc----cc
Confidence 999999887765322110 00000 0112499999999999999885211000 000000000 00
Q ss_pred chHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC----CCcEEEEEecCh
Q 007130 549 KPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG----QDVQLSHVGHWQ 607 (617)
Q Consensus 549 k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~----~dv~LVIvG~G~ 607 (617)
.+.....+++.+ .. +++++|+|+|||.++||++.||+|+..+.. .++. +|+|.|+
T Consensus 463 ~~~~~~~l~r~~-~~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gd 521 (1050)
T TIGR02468 463 DPPIWSEIMRFF-TN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRD 521 (1050)
T ss_pred cchhhHHHHhhc-cc--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCc
Confidence 011112234333 32 578999999999999999999999998864 1454 5678765
No 21
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.81 E-value=1e-18 Score=192.20 Aligned_cols=270 Identities=11% Similarity=0.076 Sum_probs=143.4
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCCCCCCCCCCCcceeEeecc-ccceEEEEEeeeC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG-HRVMVVAPHYGNYAEPQDTGIRKRYRVDR-QDIEVAYFQAYID 353 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~G-heV~Vv~p~y~~~~~~~~~~~~~~~~~~g-~~~~~~v~~~~~~ 353 (617)
+.|||+++|..|.|+ ++|+.+.+..++.+|+++| |+|+||+|.++........+....+..+. +...++ .+ .
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~---~~-~ 76 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVR---QW-L 76 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhh---hh-c
Confidence 459999999999997 9999999999999999999 79999999876321100000000010000 000000 00 0
Q ss_pred CcEEEEecCccccccCCCcCCCCCCccccc-cccccccCCCCcEEEEcCcch-hHHHHHHHHHhhhccCCCCceEEEEEe
Q 007130 354 GVDFVFLDSPLFRHLGNNIYGGGREIPWYV-PCGGVCYGDGNLVFIANDWHT-ALLPVYLKAYYRDNGLMQYTRSLLVIH 431 (617)
Q Consensus 354 gV~v~~i~~p~~~~~~~~iy~~~~~~~~~l-~~~~v~~~~~pDIIHaHd~~t-al~~~~l~~~~~~~~~~~~iPvV~TiH 431 (617)
+-.++++....+...+ ..|+......+.. ...+.+..++|||||+|+... +++. ..+...+ +..++|.|+|
T Consensus 77 ~~~v~r~~s~~~p~yp-~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~-~g~~~~~-----k~~~vV~tyH 149 (462)
T PLN02846 77 EERISFLPKFSIKFYP-GKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYH-HGKRWKT-----KFRLVIGIVH 149 (462)
T ss_pred cCeEEEecccccccCc-ccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHH-HHHHHHh-----cCCcEEEEEC
Confidence 1122222211110000 0111000000100 012344668899999998532 3320 0222111 2244888999
Q ss_pred CCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCc
Q 007130 432 NIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWK 511 (617)
Q Consensus 432 ~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~k 511 (617)
+- |....+.. ..+....++ .++ ...++++. ++|.|+++|..+. ++.. .
T Consensus 150 T~-y~~Y~~~~---~~g~~~~~l--~~~-------~~~~~~r~--~~d~vi~pS~~~~-~l~~----------------~ 197 (462)
T PLN02846 150 TN-YLEYVKRE---KNGRVKAFL--LKY-------INSWVVDI--YCHKVIRLSAATQ-DYPR----------------S 197 (462)
T ss_pred CC-hHHHHHHh---ccchHHHHH--HHH-------HHHHHHHH--hcCEEEccCHHHH-HHhh----------------C
Confidence 82 21111100 000000000 000 01122222 4899999997543 3331 2
Q ss_pred EEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHH
Q 007130 512 LSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIP 591 (617)
Q Consensus 512 I~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~ 591 (617)
+.+.+||||.+.|.|... .+++.+. +.+.-.++++|||||.++||++.||+|++
T Consensus 198 ~i~~v~GVd~~~f~~~~~-------------------------~~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~ 251 (462)
T PLN02846 198 IICNVHGVNPKFLEIGKL-------------------------KLEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLH 251 (462)
T ss_pred EEecCceechhhcCCCcc-------------------------cHhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHH
Confidence 334458999998876421 0222222 21111357999999999999999999999
Q ss_pred hccC--CCcEEEEEecCh--hhhHHHHHh
Q 007130 592 WMMG--QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 592 ~L~~--~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
.+.+ .+++|+|+|+|+ .++++++++
T Consensus 252 ~l~~~~~~~~l~ivGdGp~~~~L~~~a~~ 280 (462)
T PLN02846 252 KHQKELSGLEVDLYGSGEDSDEVKAAAEK 280 (462)
T ss_pred HHHhhCCCeEEEEECCCccHHHHHHHHHh
Confidence 8865 489999999998 466776654
No 22
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.79 E-value=6.6e-19 Score=182.06 Aligned_cols=242 Identities=24% Similarity=0.344 Sum_probs=161.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
++|+||+..|+| ..||++.++++|++.|.++||.|.|++-.|++.. |+ +| .-+|.++
T Consensus 1 ~~i~mVsdff~P--~~ggveshiy~lSq~li~lghkVvvithayg~r~-----gi--ry--------------lt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYP--STGGVESHIYALSQCLIRLGHKVVVITHAYGNRV-----GI--RY--------------LTNGLKV 57 (426)
T ss_pred CcceeeCccccc--CCCChhhhHHHhhcchhhcCCeEEEEeccccCcc-----ce--ee--------------ecCCceE
Confidence 589999999999 5999999999999999999999999998888631 21 22 1234566
Q ss_pred EEecCccccccC--CCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcc
Q 007130 358 VFLDSPLFRHLG--NNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 435 (617)
Q Consensus 358 ~~i~~p~~~~~~--~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~ 435 (617)
|.++........ +.+|+. +++- +.++..++..|||.|...+.++=-.+ ...+ ..|.++|+|-|.+ |
T Consensus 58 yylp~~v~~n~tT~ptv~~~---~Pll---r~i~lrE~I~ivhghs~fS~lahe~l-~har----tMGlktVfTdHSl-f 125 (426)
T KOG1111|consen 58 YYLPAVVGYNQTTFPTVFSD---FPLL---RPILLRERIEIVHGHSPFSYLAHEAL-MHAR----TMGLKTVFTDHSL-F 125 (426)
T ss_pred EEEeeeeeecccchhhhhcc---Cccc---chhhhhhceEEEecCChHHHHHHHHH-HHHH----hcCceEEEecccc-c
Confidence 655543221100 122322 1221 23444568899999987665542211 1112 2568999999994 2
Q ss_pred cCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEE
Q 007130 436 QGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGI 515 (617)
Q Consensus 436 qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vI 515 (617)
|..+.... +++ .++...+...|++||||+.-.+... +...| ++.++.+|
T Consensus 126 -Gfad~~si--------~~n-------------~ll~~sL~~id~~IcVshtskentv-------lr~~L--~p~kvsvI 174 (426)
T KOG1111|consen 126 -GFADIGSI--------LTN-------------KLLPLSLANIDRIICVSHTSKENTV-------LRGAL--APAKVSVI 174 (426)
T ss_pred -cccchhhh--------hhc-------------ceeeeeecCCCcEEEEeecCCCceE-------EEecc--CHhHeeec
Confidence 22111110 110 1233456688999999986554322 22223 57899999
Q ss_pred ecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC
Q 007130 516 VNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG 595 (617)
Q Consensus 516 pNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~ 595 (617)
||.|+++.|.|.... + + ..+...|..++||.++||+|+|+++++.+.+
T Consensus 175 PnAv~~~~f~P~~~~------------------~-------------~-S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~ 222 (426)
T KOG1111|consen 175 PNAVVTHTFTPDAAD------------------K-------------P-SADIITIVVASRLVYRKGIDLLLEIIPSVCD 222 (426)
T ss_pred cceeeccccccCccc------------------c-------------C-CCCeeEEEEEeeeeeccchHHHHHHHHHHHh
Confidence 999999999883210 0 0 1234689999999999999999999999976
Q ss_pred --CCcEEEEEecCh--hhhHHHHHhC
Q 007130 596 --QDVQLSHVGHWQ--TRFGRDAEEL 617 (617)
Q Consensus 596 --~dv~LVIvG~G~--~~~e~~l~~L 617 (617)
.+++|+|+|+|| .+||+.++++
T Consensus 223 ~~p~vrfii~GDGPk~i~lee~lEk~ 248 (426)
T KOG1111|consen 223 KHPEVRFIIIGDGPKRIDLEEMLEKL 248 (426)
T ss_pred cCCCeeEEEecCCcccchHHHHHHHh
Confidence 499999999999 4788877653
No 23
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.77 E-value=1.8e-17 Score=174.41 Aligned_cols=239 Identities=20% Similarity=0.191 Sum_probs=143.4
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|..+++|- ..||+++++.+|+++|.++||+|+|+++........ ....|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKE----------------------TEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcc----------------------cccCCceEE
Confidence 689997765553 589999999999999999999999999764322100 123456665
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.++.+.........+. . +.+. ..+....++|+||........+..+++ ..+.|+|+++|+..+..
T Consensus 58 ~~~~~~~~~~~~~~~~----~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~~~~~v~~~h~~~~~~- 122 (363)
T cd04955 58 HIPAPEIGGLGTIIYD----I-LAIL-HALFVKRDIDHVHALGPAIAPFLPLLR--------LKGKKVVVNMDGLEWKR- 122 (363)
T ss_pred EcCCCCccchhhhHHH----H-HHHH-HHHhccCCeEEEEecCccHHHHHHHHH--------hcCCCEEEEccCcceee-
Confidence 5543221100000000 0 0000 011112334444444333322222111 24789999999853311
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.. ++. ... .+ ...+++.+++.||.|+++|+..++.+... +| ... .+||||
T Consensus 123 ---~~-----~~~-~~~--~~-------~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~----------~~~-~~i~ng 172 (363)
T cd04955 123 ---AK-----WGR-PAK--RY-------LKFGEKLAVKFADRLIADSPGIKEYLKEK-YG----------RDS-TYIPYG 172 (363)
T ss_pred ---cc-----ccc-chh--HH-------HHHHHHHHHhhccEEEeCCHHHHHHHHHh-cC----------CCC-eeeCCC
Confidence 00 000 000 00 11245667889999999999998887542 22 122 899999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCc
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDV 598 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv 598 (617)
+|...+.+. ...++.++++ +.+.|+|+||+.++||++.|++|++.+.. ++
T Consensus 173 v~~~~~~~~--------------------------~~~~~~~~~~---~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~ 222 (363)
T cd04955 173 ADHVVSSEE--------------------------DEILKKYGLE---PGRYYLLVGRIVPENNIDDLIEAFSKSNS-GK 222 (363)
T ss_pred cChhhcchh--------------------------hhhHHhcCCC---CCcEEEEEecccccCCHHHHHHHHHhhcc-Cc
Confidence 998765431 1134455553 34578999999999999999999998865 89
Q ss_pred EEEEEecCh--hhhHHHHH
Q 007130 599 QLSHVGHWQ--TRFGRDAE 615 (617)
Q Consensus 599 ~LVIvG~G~--~~~e~~l~ 615 (617)
+|+|+|+|+ ..+.++++
T Consensus 223 ~l~ivG~~~~~~~~~~~~~ 241 (363)
T cd04955 223 KLVIVGNADHNTPYGKLLK 241 (363)
T ss_pred eEEEEcCCCCcchHHHHHH
Confidence 999999984 34555443
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.77 E-value=3.4e-18 Score=183.30 Aligned_cols=246 Identities=16% Similarity=0.119 Sum_probs=143.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCC-cE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDG-VD 356 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~g-V~ 356 (617)
||||++.+.+ ..||+++++.+|+++|+++||+|+|+|+..+....... ..++ +.
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~---------------------~~~~~~~ 55 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEE---------------------TKDGTLP 55 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchh---------------------ccCCeeE
Confidence 8999998654 57999999999999999999999999975432110000 0011 11
Q ss_pred EEEecC--c-cccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCC
Q 007130 357 FVFLDS--P-LFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNI 433 (617)
Q Consensus 357 v~~i~~--p-~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~ 433 (617)
+..+.. + .++.+...+.... ...+......+....++||||+|.+..+. ++ ++. ..+.|+|+++|..
T Consensus 56 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~-~~-~~~-------~~~~~~i~~~h~~ 125 (392)
T cd03805 56 VRVRGDWLPRSIFGRFHILCAYL-RMLYLALYLLLLPDEKYDVFIVDQVSACV-PL-LKL-------FSPSKILFYCHFP 125 (392)
T ss_pred EEEEeEEEcchhhHhHHHHHHHH-HHHHHHHHHHhcccCCCCEEEEcCcchHH-HH-HHH-------hcCCcEEEEEecC
Confidence 111110 0 0100000000000 00000000012345689999999866433 22 221 1337999999953
Q ss_pred cccCCCCCCcccccCCCccccc-cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcE
Q 007130 434 AHQGRGPVSDFVYTDLPGHYLD-LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKL 512 (617)
Q Consensus 434 ~~qg~~p~~~~~~~glp~~~~~-~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI 512 (617)
... +.. ...+.. .++.. ...+++++++.||.|+++|+..++.+... ++. ....++
T Consensus 126 ~~~--~~~--------~~~~~~~~~~~~------~~~~e~~~~~~ad~ii~~s~~~~~~~~~~-~~~-------~~~~~~ 181 (392)
T cd03805 126 DQL--LAQ--------RGSLLKRLYRKP------FDWLEEFTTGMADKIVVNSNFTASVFKKT-FPS-------LAKNPR 181 (392)
T ss_pred hHH--hcC--------CCcHHHHHHHHH------HHHHHHHHhhCceEEEEcChhHHHHHHHH-hcc-------cccCCc
Confidence 210 000 000100 00000 12356778899999999999988877642 210 123345
Q ss_pred EEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHh
Q 007130 513 SGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPW 592 (617)
Q Consensus 513 ~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~ 592 (617)
.+|+||+|.+.|.|.... ..++..+.+ ++.++|+|+||+.++||++.|++|++.
T Consensus 182 ~vi~n~vd~~~~~~~~~~------------------------~~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 182 EVVYPCVDTDSFESTSED------------------------PDPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred ceeCCCcCHHHcCccccc------------------------ccccccccC--CCceEEEEEeeecccCChHHHHHHHHH
Confidence 699999999888653210 011112222 467899999999999999999999999
Q ss_pred ccC-----CCcEEEEEecChh
Q 007130 593 MMG-----QDVQLSHVGHWQT 608 (617)
Q Consensus 593 L~~-----~dv~LVIvG~G~~ 608 (617)
+.+ .+++|+|+|+|+.
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~ 256 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP 256 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC
Confidence 864 3799999999864
No 25
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.77 E-value=2.2e-17 Score=173.32 Aligned_cols=235 Identities=17% Similarity=0.175 Sum_probs=153.0
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..+ ..||++.++.+|+++|.++||+|+|++........... ....+.
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888654 57999999999999999999999999865332111000 000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+.... ........ .+. ...++...+|||||+|.+++.+++.+++.. ..+.|+|+|.|+....+.
T Consensus 54 ~~~~~~------~~~~~~~~-~~~--~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~------~~~~~~v~~~h~~~~~~~ 118 (360)
T cd04951 54 NLNMSK------NPLSFLLA-LWK--LRKILRQFKPDVVHAHMFHANIFARLLRLF------LPSPPLICTAHSKNEGGR 118 (360)
T ss_pred Eecccc------cchhhHHH-HHH--HHHHHHhcCCCEEEEcccchHHHHHHHHhh------CCCCcEEEEeeccCchhH
Confidence 111000 00000000 010 123445678999999998776665555432 257899999998532110
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
. ...+.+.....++.++++|+...+.+.+. ++ .+..++.+||||
T Consensus 119 --------------~-------------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~--------~~~~~~~~i~ng 162 (360)
T cd04951 119 --------------L-------------RMLAYRLTDFLSDLTTNVSKEALDYFIAS-KA--------FNANKSFVVYNG 162 (360)
T ss_pred --------------H-------------HHHHHHHHhhccCceEEEcHHHHHHHHhc-cC--------CCcccEEEEccc
Confidence 0 01123344556889999999888777642 11 146789999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ-- 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~-- 596 (617)
+|...|.+.. ..+..+++.++++ ++.++|+|+||+.++||++.+++|+..+.+.
T Consensus 163 ~~~~~~~~~~----------------------~~~~~~~~~~~~~--~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~ 218 (360)
T cd04951 163 IDTDRFRKDP----------------------ARRLKIRNALGVK--NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYL 218 (360)
T ss_pred cchhhcCcch----------------------HHHHHHHHHcCcC--CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCC
Confidence 9988775421 1234467788875 4678999999999999999999999988763
Q ss_pred CcEEEEEecCh--hhhHHHHH
Q 007130 597 DVQLSHVGHWQ--TRFGRDAE 615 (617)
Q Consensus 597 dv~LVIvG~G~--~~~e~~l~ 615 (617)
+++|+|+|+|+ ..+.+.++
T Consensus 219 ~~~l~i~G~g~~~~~~~~~~~ 239 (360)
T cd04951 219 DIKLLIAGDGPLRATLERLIK 239 (360)
T ss_pred CeEEEEEcCCCcHHHHHHHHH
Confidence 89999999997 34444444
No 26
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.77 E-value=1.9e-17 Score=174.05 Aligned_cols=218 Identities=23% Similarity=0.213 Sum_probs=144.4
Q ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEEecCccccccCCC
Q 007130 292 KTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNN 371 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~~~~~~~~ 371 (617)
..||+++++.+|+++|+++||+|.|+++.... ... . ...|++++.+..... .
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~--~--------------------~~~~~~~~~~~~~~~-----~ 59 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL-VAE--L--------------------EAEGSRHIKLPFISK-----N 59 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch-HHH--H--------------------HhcCCeEEEcccccc-----c
Confidence 56999999999999999999999999864321 100 0 112333332221100 0
Q ss_pred cCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCc
Q 007130 372 IYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPG 451 (617)
Q Consensus 372 iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~ 451 (617)
.+..... .+.+ ..++...+||+||+|.+...+.+.++.. ..++|+|+++|+... .
T Consensus 60 ~~~~~~~-~~~l--~~~~~~~~~dii~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~-----~---------- 114 (355)
T cd03819 60 PLRILLN-VARL--RRLIREEKVDIVHARSRAPAWSAYLAAR-------RTRPPFVTTVHGFYS-----V---------- 114 (355)
T ss_pred hhhhHHH-HHHH--HHHHHHcCCCEEEECCCchhHHHHHHHH-------hcCCCEEEEeCCchh-----h----------
Confidence 1100000 0001 1234567899999998766555544332 257999999998421 0
Q ss_pred cccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccc
Q 007130 452 HYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIH 531 (617)
Q Consensus 452 ~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~ 531 (617)
..+....++.+|.++++|+.+++.+.. .+| .+..++.+||||+|...|.+...
T Consensus 115 ----------------~~~~~~~~~~~~~vi~~s~~~~~~~~~-~~~--------~~~~k~~~i~ngi~~~~~~~~~~-- 167 (355)
T cd03819 115 ----------------NFRYNAIMARGDRVIAVSNFIADHIRE-NYG--------VDPDRIRVIPRGVDLDRFDPGAV-- 167 (355)
T ss_pred ----------------HHHHHHHHHhcCEEEEeCHHHHHHHHH-hcC--------CChhhEEEecCCccccccCcccc--
Confidence 002234567899999999998888763 233 15678999999999988865321
Q ss_pred cccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh
Q 007130 532 LTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT 608 (617)
Q Consensus 532 l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~ 608 (617)
.......++++++++ ++.++|+|+||+.++||++.+++|+..+.+ .+++|+|+|.|+.
T Consensus 168 -----------------~~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~ 227 (355)
T cd03819 168 -----------------PPERILALAREWPLP--KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG 227 (355)
T ss_pred -----------------chHHHHHHHHHcCCC--CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc
Confidence 011122367777765 467899999999999999999999999876 5899999999863
No 27
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.76 E-value=2.2e-17 Score=173.66 Aligned_cols=238 Identities=14% Similarity=0.103 Sum_probs=149.9
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||+++++.+ ..||.+.++.+++++|.+.||+|+++++....... .. . ....++.++
T Consensus 1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~--~~----~--------------~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDY--DD----E--------------IEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCCcch--HH----H--------------HHHcCCeEE
Confidence 699999865 48999999999999999999999999986543110 00 0 011233333
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCce-EEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTR-SLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iP-vV~TiH~~~~qg 437 (617)
.+..... ..+. . ...+ ..++...+|||||+|......++.++... .+.| +|++.|+..+..
T Consensus 57 ~~~~~~~-----~~~~---~-~~~~--~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~ 118 (358)
T cd03812 57 YIPARKK-----NPLK---Y-FKKL--YKLIKKNKYDIVHVHGSSASGFILLAAKK-------AGVKVRIAHSHNTSDSH 118 (358)
T ss_pred EecCCCc-----cHHH---H-HHHH--HHHHhcCCCCEEEEeCcchhHHHHHHHhh-------CCCCeEEEEeccccccc
Confidence 3221100 0000 0 0001 12345678999999987654444443321 2344 577888742211
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
. . . ..... ...+.+..++.+|.++++|+..++.+... ....++.+|||
T Consensus 119 ~-~---~---------~~~~~--------~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-----------~~~~~~~vi~n 166 (358)
T cd03812 119 D-K---K---------KKILK--------YKVLRKLINRLATDYLACSEEAGKWLFGK-----------VKNKKFKVIPN 166 (358)
T ss_pred c-c---c---------chhhH--------HHHHHHHHHhcCCEEEEcCHHHHHHHHhC-----------CCcccEEEEec
Confidence 0 0 0 00000 01234566788999999999887776531 14578999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-- 595 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-- 595 (617)
|||.+.|.+... .+. .++.++.. .+.++|+|+||+.++||++.+++|+..+.+
T Consensus 167 gvd~~~~~~~~~----------------------~~~-~~~~~~~~--~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~ 221 (358)
T cd03812 167 GIDLEKFIFNEE----------------------IRK-KRRELGIL--EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN 221 (358)
T ss_pred cCcHHHcCCCch----------------------hhh-HHHHcCCC--CCCEEEEEEeccccccChHHHHHHHHHHHHhC
Confidence 999987755311 011 14445543 467899999999999999999999999875
Q ss_pred CCcEEEEEecCh--hhhHHHHH
Q 007130 596 QDVQLSHVGHWQ--TRFGRDAE 615 (617)
Q Consensus 596 ~dv~LVIvG~G~--~~~e~~l~ 615 (617)
.+++|+|+|+|+ ..+++.++
T Consensus 222 ~~~~l~ivG~g~~~~~~~~~~~ 243 (358)
T cd03812 222 PNAKLLLVGDGELEEEIKKKVK 243 (358)
T ss_pred CCeEEEEEeCCchHHHHHHHHH
Confidence 489999999997 34555443
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.76 E-value=2.3e-17 Score=176.14 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=152.6
Q ss_pred EEEEEcCccCCCC-----CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeC
Q 007130 279 NVILVAAECGPWS-----KTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYID 353 (617)
Q Consensus 279 KIL~Vt~e~~P~~-----~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~ 353 (617)
||+|+....+|.. ..||+++++.+|+++|+++||+|+|++......... .. ...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-~~-------------------~~~~ 60 (398)
T cd03800 1 RIALISLHGSPLAQPGGADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPP-IV-------------------ELAP 60 (398)
T ss_pred CeEEEeccccccccCCCCCCCceeehHHHHHHHHhccCceEEEEEecCCcccCC-cc-------------------cccc
Confidence 4566665543332 378999999999999999999999998654321110 00 1123
Q ss_pred CcEEEEecCccccccCC-CcCCCCCCccccccccccccCC--CCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEE
Q 007130 354 GVDFVFLDSPLFRHLGN-NIYGGGREIPWYVPCGGVCYGD--GNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVI 430 (617)
Q Consensus 354 gV~v~~i~~p~~~~~~~-~iy~~~~~~~~~l~~~~v~~~~--~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~Ti 430 (617)
++.++++.......... ..+.... .+.......+... +|||||+|.+.+++++..+.. ..++|+|+|+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~-------~~~~~~i~~~ 131 (398)
T cd03800 61 GVRVVRVPAGPAEYLPKEELWPYLD--EFADDLLRFLRREGGRPDLIHAHYWDSGLVALLLAR-------RLGIPLVHTF 131 (398)
T ss_pred ceEEEecccccccCCChhhcchhHH--HHHHHHHHHHHhcCCCccEEEEecCccchHHHHHHh-------hcCCceEEEe
Confidence 44554443211100000 0110000 0000001122233 899999999887776665543 2578999999
Q ss_pred eCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCC
Q 007130 431 HNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDW 510 (617)
Q Consensus 431 H~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~ 510 (617)
|+....... .. ....... .. .....++..++.||.|+++|+.....+... ++ .+..
T Consensus 132 h~~~~~~~~---~~---~~~~~~~----~~-----~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~--------~~~~ 187 (398)
T cd03800 132 HSLGAVKRR---HL---GAADTYE----PA-----RRIEAEERLLRAADRVIASTPQEAEELYSL-YG--------AYPR 187 (398)
T ss_pred ecccccCCc---cc---ccccccc----hh-----hhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-cc--------cccc
Confidence 985321100 00 0000000 00 012356678889999999999988777642 11 1345
Q ss_pred cEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHH
Q 007130 511 KLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAI 590 (617)
Q Consensus 511 kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~ 590 (617)
++.+|+||+|.+.|.+..+ . ...++.++.+ .+.++|+|+||+.+.||++.+++|+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~--------------------~---~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~~ll~a~ 242 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGR--------------------A---EARRARLLRD--PDKPRILAVGRLDPRKGIDTLIRAY 242 (398)
T ss_pred ccEEECCCCCccceecccc--------------------h---hhHHHhhccC--CCCcEEEEEcccccccCHHHHHHHH
Confidence 6999999999988865321 0 0113444443 4578999999999999999999999
Q ss_pred HhccC--CCcEEEEEecChh
Q 007130 591 PWMMG--QDVQLSHVGHWQT 608 (617)
Q Consensus 591 ~~L~~--~dv~LVIvG~G~~ 608 (617)
..+.+ .+++|+|+|+|..
T Consensus 243 ~~l~~~~~~~~l~i~G~~~~ 262 (398)
T cd03800 243 AELPELRERANLVIVGGPRD 262 (398)
T ss_pred HHHHHhCCCeEEEEEECCCC
Confidence 99875 3899999999863
No 29
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.75 E-value=2e-17 Score=178.85 Aligned_cols=225 Identities=13% Similarity=0.138 Sum_probs=143.3
Q ss_pred cEEEEEcCccCCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCc
Q 007130 278 MNVILVAAECGPWS--KTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (617)
Q Consensus 278 MKIL~Vt~e~~P~~--~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV 355 (617)
-||++++.+-.|.. ..||+++++..+++.|+ ++|+|++.....+.+... ..+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~---------------------~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPEYTK---------------------VNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCchhh---------------------ccCCC
Confidence 48999998865543 68999999999999995 399999987665443210 12334
Q ss_pred EEEEecCccccccCCCcCCCCCCccccccccccc---cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeC
Q 007130 356 DFVFLDSPLFRHLGNNIYGGGREIPWYVPCGGVC---YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHN 432 (617)
Q Consensus 356 ~v~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~---~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~ 432 (617)
.++.+..+....+....|......++......++ ...++||||+|+... +...+ +.. ..+.|+|+++|+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~-~~~~~-~~~------~~~~~~v~~~h~ 130 (380)
T PRK15484 59 DIHYIGFSRIYKRLFQKWTRLDPLPYSQRILNIAHKFTITKDSVIVIHNSMK-LYRQI-RER------APQAKLVMHMHN 130 (380)
T ss_pred ceEEEEeccccchhhhhhhccCchhHHHHHHHHHHhcCCCCCcEEEEeCcHH-hHHHH-Hhh------CCCCCEEEEEec
Confidence 4444322211100000000000001100000111 235689999998442 22222 211 357899999998
Q ss_pred CcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcE
Q 007130 433 IAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKL 512 (617)
Q Consensus 433 ~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI 512 (617)
. +. + ..+..+++||++|+..++.+... + +..++
T Consensus 131 ~-~~---~--------------------------------~~~~~~~~ii~~S~~~~~~~~~~-~----------~~~~i 163 (380)
T PRK15484 131 A-FE---P--------------------------------ELLDKNAKIIVPSQFLKKFYEER-L----------PNADI 163 (380)
T ss_pred c-cC---h--------------------------------hHhccCCEEEEcCHHHHHHHHhh-C----------CCCCE
Confidence 3 10 0 11235789999999988776541 1 45689
Q ss_pred EEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHh
Q 007130 513 SGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPW 592 (617)
Q Consensus 513 ~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~ 592 (617)
.+||||||.+.|.+.. +..++++++++ .+.++|+|+||+.++||++.|++|++.
T Consensus 164 ~vIpngvd~~~~~~~~------------------------~~~~~~~~~~~--~~~~~il~~Grl~~~Kg~~~Li~A~~~ 217 (380)
T PRK15484 164 SIVPNGFCLETYQSNP------------------------QPNLRQQLNIS--PDETVLLYAGRISPDKGILLLMQAFEK 217 (380)
T ss_pred EEecCCCCHHHcCCcc------------------------hHHHHHHhCCC--CCCeEEEEeccCccccCHHHHHHHHHH
Confidence 9999999988776531 12356778875 356899999999999999999999999
Q ss_pred ccC--CCcEEEEEecCh
Q 007130 593 MMG--QDVQLSHVGHWQ 607 (617)
Q Consensus 593 L~~--~dv~LVIvG~G~ 607 (617)
+.+ .+++|+|+|+|+
T Consensus 218 l~~~~p~~~lvivG~g~ 234 (380)
T PRK15484 218 LATAHSNLKLVVVGDPT 234 (380)
T ss_pred HHHhCCCeEEEEEeCCc
Confidence 865 489999999975
No 30
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=1.3e-16 Score=167.37 Aligned_cols=228 Identities=20% Similarity=0.134 Sum_probs=144.1
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
|||+|+..|+|. .||+++++.+|+++|.++||+|+|++.......... ...+.+++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999999885 899999999999999999999999987643221100 01122222
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+.. +.......+ .+.+.........+|||||+|..........+.. ..++|+|+++|+.....
T Consensus 57 ~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~~~- 120 (357)
T cd03795 57 RAPS--LLNVASTPF------SPSFFKQLKKLAKKADVIHLHFPNPLADLALLLL-------PRKKPVVVHWHSDIVKQ- 120 (357)
T ss_pred Eeec--ccccccccc------cHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHh-------ccCceEEEEEcChhhcc-
Confidence 2211 100000000 0000000012356899999997443222111111 14789999999732110
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
. .. ... ...++++.++.||.|+++|+.+.+.+... ++ ...++.+||||
T Consensus 121 ---~----------~~--~~~-------~~~~~~~~~~~~d~vi~~s~~~~~~~~~~-~~---------~~~~~~~i~~g 168 (357)
T cd03795 121 ---K----------LL--LKL-------YRPLQRRFLRRADAIVATSPNYAETSPVL-RR---------FRDKVRVIPLG 168 (357)
T ss_pred ---c----------hh--hhh-------hhHHHHHHHHhcCEEEeCcHHHHHHHHHh-cC---------CccceEEecCC
Confidence 0 00 001 11356678899999999999988776531 11 23689999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCc
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDV 598 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv 598 (617)
+|...|.+... .+. ..+..+ .+.++|+|+||+.+.||++.+++|+..+. ++
T Consensus 169 i~~~~~~~~~~----------------------~~~---~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~ 219 (357)
T cd03795 169 LDPARYPRPDA----------------------LEE---AIWRRA--AGRPFFLFVGRLVYYKGLDVLLEAAAALP--DA 219 (357)
T ss_pred CChhhcCCcch----------------------hhh---HhhcCC--CCCcEEEEecccccccCHHHHHHHHHhcc--Cc
Confidence 99988755210 000 112222 35789999999999999999999999886 89
Q ss_pred EEEEEecCh
Q 007130 599 QLSHVGHWQ 607 (617)
Q Consensus 599 ~LVIvG~G~ 607 (617)
+|+|+|+|+
T Consensus 220 ~l~i~G~g~ 228 (357)
T cd03795 220 PLVIVGEGP 228 (357)
T ss_pred EEEEEeCCh
Confidence 999999997
No 31
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.75 E-value=3.5e-17 Score=174.94 Aligned_cols=240 Identities=17% Similarity=0.059 Sum_probs=144.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
-||++|...+ ..||+++++..|+++|.+.|++++|++......... . ....|+.+
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~-------~--------------~~~~~i~~ 56 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK-------R--------------IQRPDVAF 56 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH-------H--------------HHhcCceE
Confidence 5899998754 579999999999999999999999997432211000 0 01134455
Q ss_pred EEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceE-EEEEeCCccc
Q 007130 358 VFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRS-LLVIHNIAHQ 436 (617)
Q Consensus 358 ~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPv-V~TiH~~~~q 436 (617)
+.+..... ..+. ..+.+ ..++...+|||||+|...+. .+.++.. ..++|+ ++|.|+..+.
T Consensus 57 ~~~~~~~~-----~~~~----~~~~l--~~~l~~~~~Divh~~~~~~~-~~~~~~~-------~~~~~~~i~~~h~~~~~ 117 (374)
T TIGR03088 57 YALHKQPG-----KDVA----VYPQL--YRLLRQLRPDIVHTRNLAAL-EAQLPAA-------LAGVPARIHGEHGRDVF 117 (374)
T ss_pred EEeCCCCC-----CChH----HHHHH--HHHHHHhCCCEEEEcchhHH-HHHHHHH-------hcCCCeEEEeecCcccc
Confidence 44432100 0000 00111 23445678999999975432 2222222 134553 4455542110
Q ss_pred CCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEe
Q 007130 437 GRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIV 516 (617)
Q Consensus 437 g~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIp 516 (617)
... + ..+ . ...+.+...+.+|.+|++|+.+++.+... +| .+..++.+|+
T Consensus 118 ---~~~-----~---~~~---~--------~~~~~~~~~~~~~~~i~vs~~~~~~~~~~-~~--------~~~~~~~vi~ 166 (374)
T TIGR03088 118 ---DLD-----G---SNW---K--------YRWLRRLYRPLIHHYVAVSRDLEDWLRGP-VK--------VPPAKIHQIY 166 (374)
T ss_pred ---cch-----h---hHH---H--------HHHHHHHHHhcCCeEEEeCHHHHHHHHHh-cC--------CChhhEEEec
Confidence 000 0 000 0 01123344567899999999988777642 22 1567899999
Q ss_pred cCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC
Q 007130 517 NGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ 596 (617)
Q Consensus 517 NGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~ 596 (617)
||||.+.|.|... .+...++....+ ++.++|+|+||+.++||++.|++|++.+.+.
T Consensus 167 ngvd~~~~~~~~~----------------------~~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 222 (374)
T TIGR03088 167 NGVDTERFHPSRG----------------------DRSPILPPDFFA--DESVVVGTVGRLQAVKDQPTLVRAFALLVRQ 222 (374)
T ss_pred cCccccccCCCcc----------------------chhhhhHhhcCC--CCCeEEEEEecCCcccCHHHHHHHHHHHHHh
Confidence 9999988866321 001122222222 4678999999999999999999999987642
Q ss_pred ------CcEEEEEecCh--hhhHHHHHh
Q 007130 597 ------DVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 597 ------dv~LVIvG~G~--~~~e~~l~~ 616 (617)
+++|+++|+|+ ..+++.+++
T Consensus 223 ~~~~~~~~~l~i~G~g~~~~~~~~~~~~ 250 (374)
T TIGR03088 223 LPEGAERLRLVIVGDGPARGACEQMVRA 250 (374)
T ss_pred CcccccceEEEEecCCchHHHHHHHHHH
Confidence 68999999997 455555543
No 32
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.75 E-value=2.9e-17 Score=171.24 Aligned_cols=205 Identities=20% Similarity=0.170 Sum_probs=133.6
Q ss_pred cEEEEEcCccCC--CCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCc
Q 007130 278 MNVILVAAECGP--WSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (617)
Q Consensus 278 MKIL~Vt~e~~P--~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV 355 (617)
|||++|++.+.| -...||+++++.+|+++|.++||+|+|+++........ . .. . ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-~------~~-------------~-~~~ 59 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-L------VP-------------V-VPE 59 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-e------ee-------------c-cCC
Confidence 899999998754 22589999999999999999999999999765432110 0 00 0 000
Q ss_pred EEEEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcc
Q 007130 356 DFVFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 435 (617)
Q Consensus 356 ~v~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~ 435 (617)
. +........ ...+ .... ....++...+|||||+|.+...++ +.+ ..++|+|+|+|+...
T Consensus 60 ~-~~~~~~~~~---~~~~----~~~~--~~~~~~~~~~~Divh~~~~~~~~~--~~~--------~~~~~~v~~~h~~~~ 119 (335)
T cd03802 60 P-LRLDAPGRD---RAEA----EALA--LAERALAAGDFDIVHNHSLHLPLP--FAR--------PLPVPVVTTLHGPPD 119 (335)
T ss_pred C-cccccchhh---HhhH----HHHH--HHHHHHhcCCCCEEEecCcccchh--hhc--------ccCCCEEEEecCCCC
Confidence 0 000000000 0000 0000 012334567899999998876544 111 367899999998522
Q ss_pred cCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEE
Q 007130 436 QGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGI 515 (617)
Q Consensus 436 qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vI 515 (617)
. . . .. .......++.++++|+..+.... ...++.+|
T Consensus 120 ~----~------------~-------------~~-~~~~~~~~~~~~~~s~~~~~~~~--------------~~~~~~vi 155 (335)
T cd03802 120 P----E------------L-------------LK-LYYAARPDVPFVSISDAQRRPWP--------------PLPWVATV 155 (335)
T ss_pred c----c------------c-------------ch-HHHhhCcCCeEEEecHHHHhhcc--------------cccccEEe
Confidence 1 0 0 00 12344567899999988765432 11678999
Q ss_pred ecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC
Q 007130 516 VNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG 595 (617)
Q Consensus 516 pNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~ 595 (617)
|||+|.+.|.+.. ....+|+|+||+.++||++.+++|+...
T Consensus 156 ~ngvd~~~~~~~~-------------------------------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-- 196 (335)
T cd03802 156 HNGIDLDDYPFRG-------------------------------------PKGDYLLFLGRISPEKGPHLAIRAARRA-- 196 (335)
T ss_pred cCCcChhhCCCCC-------------------------------------CCCCEEEEEEeeccccCHHHHHHHHHhc--
Confidence 9999998886420 1346899999999999999999998653
Q ss_pred CCcEEEEEecCh
Q 007130 596 QDVQLSHVGHWQ 607 (617)
Q Consensus 596 ~dv~LVIvG~G~ 607 (617)
+++|+|+|.|+
T Consensus 197 -~~~l~i~G~~~ 207 (335)
T cd03802 197 -GIPLKLAGPVS 207 (335)
T ss_pred -CCeEEEEeCCC
Confidence 79999999996
No 33
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.75 E-value=1.1e-17 Score=182.82 Aligned_cols=265 Identities=14% Similarity=0.116 Sum_probs=143.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCC-CcceeEeeccccceEEEEEeeeCCcE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT-GIRKRYRVDRQDIEVAYFQAYIDGVD 356 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~-~~~~~~~~~g~~~~~~v~~~~~~gV~ 356 (617)
||||+|...+ ..||+|..+.+|++.|.++||+|.++..+.......... .+...++... ...
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 63 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP-------------RMT 63 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecc-------------cHH
Confidence 8999999753 789999999999999999999999998764322111000 0000000000 000
Q ss_pred EEEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHH-HHHHhh-hccCCCCceEEEEEeCC-
Q 007130 357 FVFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVY-LKAYYR-DNGLMQYTRSLLVIHNI- 433 (617)
Q Consensus 357 v~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~-l~~~~~-~~~~~~~iPvV~TiH~~- 433 (617)
.+ +....++-.....++. .+.+ .+.+.+.++|||||+|..+.+++.+. +..+.+ -.-...++|+|+|+|+.
T Consensus 64 ~~-~~~~~~~~~~~~~~~~----~~~~-~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~ 137 (405)
T PRK10125 64 AM-ANIALFRLFNRDLFGN----FNEL-YRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHW 137 (405)
T ss_pred HH-HHHHHHHhcchhhcch----HHHH-HHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEeccccc
Confidence 00 0000000000001110 0000 01133577999999998776543322 111100 00012578999999996
Q ss_pred cccCCCCCCc-ccc----cCCCcc---ccccccccCCC---CchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccc
Q 007130 434 AHQGRGPVSD-FVY----TDLPGH---YLDLFKLYDPV---GGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLH 502 (617)
Q Consensus 434 ~~qg~~p~~~-~~~----~glp~~---~~~~l~~~d~~---~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~ 502 (617)
.+.|.|.... +.. ++-.+. +.. ...+.. .......++..++.++.+|++|+++++.+.. .+
T Consensus 138 ~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~--~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~-~~----- 209 (405)
T PRK10125 138 SVTGRCAFTDGCEGWKTGCQKCPTLNNYPP--VKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS-LY----- 209 (405)
T ss_pred ccCCCcCCCcccccccccCCCCCCccCCCC--CccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH-Hc-----
Confidence 4566666531 110 110000 000 000000 0001112333345578999999999987653 22
Q ss_pred cccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCC--ccc
Q 007130 503 NIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRL--DHQ 580 (617)
Q Consensus 503 ~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL--~~q 580 (617)
...++.+|+||||++.+.+..+ +. ..+ . .++.++|+|+||+ .+.
T Consensus 210 -----~~~~i~vI~NGid~~~~~~~~~----------~~-------------~~~----~--~~~~~~il~v~~~~~~~~ 255 (405)
T PRK10125 210 -----GPGRCRIINNGIDMATEAILAE----------LP-------------PVR----E--TQGKPKIAVVAHDLRYDG 255 (405)
T ss_pred -----CCCCEEEeCCCcCccccccccc----------cc-------------ccc----c--CCCCCEEEEEEeccccCC
Confidence 2468999999999754432110 00 000 0 1356789999994 378
Q ss_pred cCHHHHHHHHHhccCCCcEEEEEecChh
Q 007130 581 KGVDLIAEAIPWMMGQDVQLSHVGHWQT 608 (617)
Q Consensus 581 KGvdlLIeA~~~L~~~dv~LVIvG~G~~ 608 (617)
||++.|++|+..+. .+++|+|+|+|++
T Consensus 256 Kg~~~li~A~~~l~-~~~~L~ivG~g~~ 282 (405)
T PRK10125 256 KTDQQLVREMMALG-DKIELHTFGKFSP 282 (405)
T ss_pred ccHHHHHHHHHhCC-CCeEEEEEcCCCc
Confidence 99999999999874 5799999999854
No 34
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.74 E-value=3.2e-17 Score=179.35 Aligned_cols=256 Identities=10% Similarity=0.002 Sum_probs=148.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
-||++++.. .+|.+..+..++++|+++||+|+|+++........ . ....|+.+
T Consensus 4 ~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~-~--------------------~~~~~v~~ 56 (415)
T cd03816 4 KRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE-I--------------------LSNPNITI 56 (415)
T ss_pred cEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH-H--------------------hcCCCEEE
Confidence 577887752 46677778999999999999999999764321110 0 01235555
Q ss_pred EEecCcc-ccccCCCcCCCCCCcc---ccccccccccCCCCcEEEEcCcch---hHHHHHHHHHhhhccCCCCceEEEEE
Q 007130 358 VFLDSPL-FRHLGNNIYGGGREIP---WYVPCGGVCYGDGNLVFIANDWHT---ALLPVYLKAYYRDNGLMQYTRSLLVI 430 (617)
Q Consensus 358 ~~i~~p~-~~~~~~~iy~~~~~~~---~~l~~~~v~~~~~pDIIHaHd~~t---al~~~~l~~~~~~~~~~~~iPvV~Ti 430 (617)
+.+..+. ................ +.+ ...+....+|||||+|+... ++++.++.. +.++|+|+|+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~-------~~~~~~V~~~ 128 (415)
T cd03816 57 HPLPPPPQRLNKLPFLLFAPLKVLWQFFSL-LWLLYKLRPADYILIQNPPSIPTLLIAWLYCL-------LRRTKLIIDW 128 (415)
T ss_pred EECCCCccccccchHHHHHHHHHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHH-------HhCCeEEEEc
Confidence 5554321 0000000000000000 000 01123446899999997443 222332222 2578999999
Q ss_pred eCCcccCCCCCCcccccCCC-ccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCC
Q 007130 431 HNIAHQGRGPVSDFVYTDLP-GHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVD 509 (617)
Q Consensus 431 H~~~~qg~~p~~~~~~~glp-~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~ 509 (617)
|+..+. ... .+.. ...+. ++ ...++++.++.||.||++|+.+++.+.. +| .+.
T Consensus 129 h~~~~~----~~~---~~~~~~~~~~--~~-------~~~~e~~~~~~ad~ii~vS~~~~~~l~~--~~--------~~~ 182 (415)
T cd03816 129 HNYGYT----ILA---LKLGENHPLV--RL-------AKWYEKLFGRLADYNLCVTKAMKEDLQQ--FN--------NWK 182 (415)
T ss_pred CCchHH----HHh---cccCCCCHHH--HH-------HHHHHHHHhhcCCEeeecCHHHHHHHHh--hh--------ccC
Confidence 985221 000 0110 00000 01 1245677888999999999999988864 22 157
Q ss_pred CcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHH-------------HhCCCCCCCCcEEEEEeC
Q 007130 510 WKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQR-------------EFGLPVRDDVPVIGFIGR 576 (617)
Q Consensus 510 ~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~-------------~lGl~~~~d~~vIlfVGR 576 (617)
.++.||+||. ...|.|... ...+..+++ ..++.. ++..+|+++||
T Consensus 183 ~ki~vI~Ng~-~~~f~p~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~gr 240 (415)
T cd03816 183 IRATVLYDRP-PEQFRPLPL--------------------EEKHELFLKLAKTFLTRELRIGAVQLSE-ERPALLVSSTS 240 (415)
T ss_pred CCeeecCCCC-HHHceeCcH--------------------HHHHHHHHhccccccccccccccceecC-CCceEEEEecc
Confidence 8999999995 456766321 000111111 112221 34568889999
Q ss_pred CccccCHHHHHHHHHhccC--------CCcEEEEEecCh--hhhHHHHHh
Q 007130 577 LDHQKGVDLIAEAIPWMMG--------QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 577 L~~qKGvdlLIeA~~~L~~--------~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
|.++||++.|++|++.+.+ .+++|+|+|+|+ ..+++++++
T Consensus 241 l~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~ 290 (415)
T cd03816 241 WTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKE 290 (415)
T ss_pred ccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHH
Confidence 9999999999999998863 269999999997 466666654
No 35
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.73 E-value=9.2e-17 Score=175.42 Aligned_cols=257 Identities=18% Similarity=0.126 Sum_probs=148.3
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeee-CCcE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYI-DGVD 356 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~-~gV~ 356 (617)
|||++|..+|+-. -++.+.+-..+|.++||+|.+++.+.+..... ..... .+.+.. .+.+..... ..+.
T Consensus 1 m~ia~~~~~~P~~-----setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~-~~~~~-~~~~~~---~~~~~~~~~~~~~~ 70 (406)
T PRK15427 1 MKVGFFLLKFPLS-----SETFVLNQITAFIDMGFEVEIVALQKGDTQNT-HAAWT-KYNLAA---KTRWLQDEPQGKVA 70 (406)
T ss_pred CeEEEEeccCCcc-----chhhHHHHHHHHHHcCceEEEEEccCCCcccc-ccchh-hhcccc---ceeecCcCccchHH
Confidence 8999999998543 48999999999999999999998764431100 00000 000000 000000000 0000
Q ss_pred EEE---e-cCccccccC----CCcCCCCCCcccccc----ccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCc
Q 007130 357 FVF---L-DSPLFRHLG----NNIYGGGREIPWYVP----CGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYT 424 (617)
Q Consensus 357 v~~---i-~~p~~~~~~----~~iy~~~~~~~~~l~----~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~i 424 (617)
... + ..+.++... .+....... .+.+. ....+...+||+||+|.++++.++.+++.. + ....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~----~-~~~~ 144 (406)
T PRK15427 71 KLRHRASQTLRGIHRKNTWKALNLKRYGAE-SRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLREL----G-VLRG 144 (406)
T ss_pred HHhhhhhhHhhhhcccchhccCChhhhhhh-hHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHh----C-CCCC
Confidence 000 0 000000000 000000000 00000 012234668999999998776665555432 1 1345
Q ss_pred eEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccc
Q 007130 425 RSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNI 504 (617)
Q Consensus 425 PvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~ 504 (617)
|+++|+|+.+.. ... .. ..+ ...++..++.||.|+++|+..++.+.. .|
T Consensus 145 ~~~~t~Hg~d~~---~~~----------~~---~~~-------~~~~~~~~~~ad~vv~~S~~~~~~l~~--~g------ 193 (406)
T PRK15427 145 KIATIFHGIDIS---SRE----------VL---NHY-------TPEYQQLFRRGDLMLPISDLWAGRLQK--MG------ 193 (406)
T ss_pred CeEEEEcccccc---cch----------hh---hhh-------hHHHHHHHHhCCEEEECCHHHHHHHHH--cC------
Confidence 678899985321 000 00 000 123456678999999999998888764 22
Q ss_pred cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHH
Q 007130 505 INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVD 584 (617)
Q Consensus 505 l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvd 584 (617)
.+..++.+||||||.+.|.+.... . ..+...|+|+|||.++||++
T Consensus 194 --~~~~ki~vi~nGvd~~~f~~~~~~-------------------------------~--~~~~~~il~vGrl~~~Kg~~ 238 (406)
T PRK15427 194 --CPPEKIAVSRMGVDMTRFSPRPVK-------------------------------A--PATPLEIISVARLTEKKGLH 238 (406)
T ss_pred --CCHHHEEEcCCCCCHHHcCCCccc-------------------------------c--CCCCeEEEEEeCcchhcCHH
Confidence 156799999999999888653110 0 12346799999999999999
Q ss_pred HHHHHHHhccC--CCcEEEEEecCh--hhhHHHHHh
Q 007130 585 LIAEAIPWMMG--QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 585 lLIeA~~~L~~--~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
.|++|++.+.+ .+++|+|+|+|+ ..+++.+++
T Consensus 239 ~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~ 274 (406)
T PRK15427 239 VAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQ 274 (406)
T ss_pred HHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHH
Confidence 99999999875 379999999997 456666554
No 36
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.72 E-value=4.4e-17 Score=174.74 Aligned_cols=229 Identities=18% Similarity=0.135 Sum_probs=137.6
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..+ ..||+++++.+|+++|.+.||+|+++++...... ......+ .....|..+
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~----~~~~~~~------------~~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEF----FNVTKKF------------HNALQGADI- 59 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCChhH----HHHHHHh------------hHhhcCCCC-
Confidence 699998764 4799999999999999999999999987532110 0000000 000112221
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+.. ..+ ..|. . .+...+.+.....+|||||+|++....++.+.+ ..++|+|++.|+...
T Consensus 60 ~~~~-~~~----~~~~---~-~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~--------~~~~~~i~~~H~~~~--- 119 (372)
T cd03792 60 ELSE-EEK----EIYL---E-WNEENAERPLLDLDADVVVIHDPQPLALPLFKK--------KRGRPWIWRCHIDLS--- 119 (372)
T ss_pred CCCH-HHH----HHHH---H-HHHHHhccccccCCCCEEEECCCCchhHHHhhh--------cCCCeEEEEeeeecC---
Confidence 1110 000 0000 0 000001112335589999999987433322211 237899999998411
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.+. . ..+.+++..++.+|.++++|..++ . .+ + ...++ +||||
T Consensus 120 ~~~------------~-----------~~~~~~~~~~~~~d~~i~~~~~~~---~---~~--~------~~~~~-vipng 161 (372)
T cd03792 120 SPN------------R-----------RVWDFLQPYIEDYDAAVFHLPEYV---P---PQ--V------PPRKV-IIPPS 161 (372)
T ss_pred CCc------------H-----------HHHHHHHHHHHhCCEEeecHHHhc---C---CC--C------CCceE-EeCCC
Confidence 000 0 012344567788999999884332 1 11 1 23455 99999
Q ss_pred CcCCC-CCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--
Q 007130 519 IDTKE-WSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-- 595 (617)
Q Consensus 519 ID~~~-f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-- 595 (617)
||... +.. .++ +..+..+++++|++ ++.++|+|+|||.++||++.|++|++.+.+
T Consensus 162 vd~~~~~~~------------~~~--------~~~~~~~~~~~~~~--~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~ 219 (372)
T cd03792 162 IDPLSGKNR------------ELS--------PADIEYILEKYGID--PERPYITQVSRFDPWKDPFGVIDAYRKVKERV 219 (372)
T ss_pred CCCCccccC------------CCC--------HHHHHHHHHHhCCC--CCCcEEEEEeccccccCcHHHHHHHHHHHhhC
Confidence 99643 211 111 12234567888886 467899999999999999999999998865
Q ss_pred CCcEEEEEecChh
Q 007130 596 QDVQLSHVGHWQT 608 (617)
Q Consensus 596 ~dv~LVIvG~G~~ 608 (617)
.+++|+|+|+|+.
T Consensus 220 ~~~~l~i~G~g~~ 232 (372)
T cd03792 220 PDPQLVLVGSGAT 232 (372)
T ss_pred CCCEEEEEeCCCC
Confidence 3899999999863
No 37
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.72 E-value=2.3e-16 Score=163.96 Aligned_cols=248 Identities=20% Similarity=0.176 Sum_probs=147.2
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|++.++| ..||.+.++.+|+++|++.||+|+|+++........... .. . ........
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~--------~~----~-----~~~~~~~~ 61 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVAL--------NG----V-----PVKLFSIN 61 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhc--------cC----c-----eeeecccc
Confidence 79999998887 589999999999999999999999999765432211000 00 0 00000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
........ ...+ .+.+.........+|||||+|+.........+. ..+ ..++|+|+++|+......
T Consensus 62 ~~~~~~~~---~~~~------~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~-~~~----~~~~~~i~~~~~~~~~~~ 127 (375)
T cd03821 62 VAYGLNLA---RYLF------PPSLLAWLRLNIREADIVHVHGLWSYPSLAAAR-AAR----KYGIPYVVSPHGMLDPWA 127 (375)
T ss_pred hhhhhhhh---hhcc------ChhHHHHHHHhCCCCCEEEEecccchHHHHHHH-HHH----HhCCCEEEEccccccccc
Confidence 00000000 0000 000000011234579999999832211111111 111 257899999998522110
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.+.. . +...+ + .....+..+..++.|+++|......+... + ...++.+||||
T Consensus 128 ~~~~-----~----~~~~~--~------~~~~~~~~~~~~~~i~~~s~~~~~~~~~~--~---------~~~~~~vi~~~ 179 (375)
T cd03821 128 LPHK-----A----LKKRL--A------WFLFERRLLQAAAAVHATSEQEAAEIRRL--G---------LKAPIAVIPNG 179 (375)
T ss_pred cccc-----h----hhhHH--H------HHHHHHHHHhcCCEEEECCHHHHHHHHhh--C---------CcccEEEcCCC
Confidence 0000 0 00000 0 12234566788999999997766555421 1 45789999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--C
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--Q 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~ 596 (617)
+|.+.|.+... ...++.++.+ .+.++|+|+||+.++||++.+++|+..+.+ .
T Consensus 180 ~~~~~~~~~~~------------------------~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~ 233 (375)
T cd03821 180 VDIPPFAALPS------------------------RGRRRKFPIL--PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFP 233 (375)
T ss_pred cChhccCcchh------------------------hhhhhhccCC--CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcC
Confidence 99988865311 0114455554 467899999999999999999999999886 4
Q ss_pred CcEEEEEecChhhhHHH
Q 007130 597 DVQLSHVGHWQTRFGRD 613 (617)
Q Consensus 597 dv~LVIvG~G~~~~e~~ 613 (617)
+++|+|+|.+...+...
T Consensus 234 ~~~l~i~G~~~~~~~~~ 250 (375)
T cd03821 234 DWHLVIAGPDEGGYRAE 250 (375)
T ss_pred CeEEEEECCCCcchHHH
Confidence 89999999986544433
No 38
>PLN00142 sucrose synthase
Probab=99.71 E-value=7.1e-17 Score=186.29 Aligned_cols=294 Identities=15% Similarity=0.124 Sum_probs=157.9
Q ss_pred CcEEEEEcCccC--CC-----CCCCcHHHHHHHHH--------HHHHHCCCeEE----EEecCCCCCCCCCCCCcceeEe
Q 007130 277 VMNVILVAAECG--PW-----SKTGGLGDVAGALP--------KALARRGHRVM----VVAPHYGNYAEPQDTGIRKRYR 337 (617)
Q Consensus 277 ~MKIL~Vt~e~~--P~-----~~~GGlg~~v~~La--------kaLa~~GheV~----Vv~p~y~~~~~~~~~~~~~~~~ 337 (617)
.|||+||+..-+ |. ..+||.-+|+.+|+ ++|+++||+|+ |+|........ ..+-...-.
T Consensus 279 ~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~--~~~~~~~e~ 356 (815)
T PLN00142 279 VFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKG--TTCNQRLEK 356 (815)
T ss_pred hHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccC--CcccCccee
Confidence 479999997643 11 25899999998655 67778999774 88865432110 000000000
Q ss_pred eccccceEEEEEeeeCCcEEEEecCcc---ccc--c-CCCcCCCCCCccccccccccc--cCCCCcEEEEcCcchhHHHH
Q 007130 338 VDRQDIEVAYFQAYIDGVDFVFLDSPL---FRH--L-GNNIYGGGREIPWYVPCGGVC--YGDGNLVFIANDWHTALLPV 409 (617)
Q Consensus 338 ~~g~~~~~~v~~~~~~gV~v~~i~~p~---~~~--~-~~~iy~~~~~~~~~l~~~~v~--~~~~pDIIHaHd~~tal~~~ 409 (617)
+. ...++.+++++... +.. . ...+|.+..++...+ ...+. ....|||||+|+|.+++++.
T Consensus 357 v~-----------~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~-~~~~~~~~~~~PDlIHaHYwdsg~vA~ 424 (815)
T PLN00142 357 VS-----------GTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDA-ASEILAELQGKPDLIIGNYSDGNLVAS 424 (815)
T ss_pred cc-----------CCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHH-HHHHHHhcCCCCCEEEECCccHHHHHH
Confidence 00 11244444443211 000 0 000111000000000 00111 23469999999999999998
Q ss_pred HHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHH
Q 007130 410 YLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYS 489 (617)
Q Consensus 410 ~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a 489 (617)
.++.. .++|.|.|.|.+.-... ......+-.....+ ++- ..+..+..++..||.|||.+....
T Consensus 425 ~La~~-------lgVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y----~~~-----~r~~aE~~a~~~Ad~IIasT~qEi 487 (815)
T PLN00142 425 LLAHK-------LGVTQCTIAHALEKTKY-PDSDIYWKKFDDKY----HFS-----CQFTADLIAMNHADFIITSTYQEI 487 (815)
T ss_pred HHHHH-------hCCCEEEEcccchhhhc-cccCCcccccchhh----hhh-----hchHHHHHHHHhhhHHHhCcHHHH
Confidence 87752 68999999998632111 11000000001110 000 013456778899999999997654
Q ss_pred HHH----Hh--hhcCC---ccccc---cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHH
Q 007130 490 WEL----KT--AEGGW---GLHNI---INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQ 557 (617)
Q Consensus 490 ~~l----~~--~~~G~---gL~~~---l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr 557 (617)
..+ .+ +..+. ||..+ ++....++.+|++|+|...|.|..+.........+ ..+.+ --+....+
T Consensus 488 ~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n-~I~~~----l~~~~~~~ 562 (815)
T PLN00142 488 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHP-SIEEL----LYSPEQND 562 (815)
T ss_pred hcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcc-cchhh----cCChHHHH
Confidence 322 11 00000 01111 11124589999999999999874321000000000 00000 00112245
Q ss_pred HHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecC
Q 007130 558 REFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHW 606 (617)
Q Consensus 558 ~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G 606 (617)
+.+|+..++++++|+++|||+++||++.||+|++.+.+ .+++|+|+|+|
T Consensus 563 e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg 613 (815)
T PLN00142 563 EHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGF 613 (815)
T ss_pred HHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECC
Confidence 57787545678899999999999999999999988754 37999999987
No 39
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.70 E-value=5.8e-16 Score=161.19 Aligned_cols=239 Identities=21% Similarity=0.238 Sum_probs=148.7
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..|+|. .||.+.++..|+++|+++||+|+++++........... .++..+
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 799999999884 89999999999999999999999999876543211000 000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcch-hHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHT-ALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~t-al~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
.+....+... ...+.. +. ....++...+|||||+|.... +..+..+.. ..++|+|+++|+....
T Consensus 57 ~~~~~~~~~~-~~~~~~-----~~-~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~- 121 (374)
T cd03817 57 RVPTFKYPDF-RLPLPI-----PR-ALIIILKELGPDIVHTHTPFSLGLLGLRVAR-------KLGIPVVATYHTMYED- 121 (374)
T ss_pred ccccchhhhh-hccccH-----HH-HHHHHHhhcCCCEEEECCchhhhhHHHHHHH-------HcCCCEEEEecCCHHH-
Confidence 0000000000 000000 00 001224567899999997532 222222221 2588999999985210
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhH-HHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEe
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHF-NIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIV 516 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~-~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIp 516 (617)
.. ........... . ... .+++..+..||.|+++|+.+++.+.. ++ ...++.+|+
T Consensus 122 ~~-----~~~~~~~~~~~--~-------~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~--~~---------~~~~~~vi~ 176 (374)
T cd03817 122 YT-----HYVPLGRLLAR--A-------VVRRKLSRRFYNRCDAVIAPSEKIADLLRE--YG---------VKRPIEVIP 176 (374)
T ss_pred HH-----HHHhcccchhH--H-------HHHHHHHHHHhhhCCEEEeccHHHHHHHHh--cC---------CCCceEEcC
Confidence 00 00000000000 0 011 35677888999999999998877653 22 235699999
Q ss_pred cCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC-
Q 007130 517 NGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG- 595 (617)
Q Consensus 517 NGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~- 595 (617)
||+|...|.+... ...++.+++. .+.++|+|+||+.+.||++.+++|+..+.+
T Consensus 177 ~~~~~~~~~~~~~------------------------~~~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~ 230 (374)
T cd03817 177 TGIDLDRFEPVDG------------------------DDERRKLGIP--EDEPVLLYVGRLAKEKNIDFLIRAFARLLKE 230 (374)
T ss_pred CccchhccCccch------------------------hHHHHhcCCC--CCCeEEEEEeeeecccCHHHHHHHHHHHHHh
Confidence 9999988755310 1124555554 456899999999999999999999998876
Q ss_pred -CCcEEEEEecCh
Q 007130 596 -QDVQLSHVGHWQ 607 (617)
Q Consensus 596 -~dv~LVIvG~G~ 607 (617)
.+++|+|+|.|+
T Consensus 231 ~~~~~l~i~G~~~ 243 (374)
T cd03817 231 EPDVKLVIVGDGP 243 (374)
T ss_pred CCCeEEEEEeCCc
Confidence 589999999986
No 40
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.70 E-value=4.5e-16 Score=161.12 Aligned_cols=233 Identities=20% Similarity=0.154 Sum_probs=153.5
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|+..+. .||.++++..|+++|.+.||+|.+++.......... . ...+++++
T Consensus 1 ~i~~i~~~~~----~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~-------~--------------~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLD----VGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEE-------L--------------EEAGVPVY 55 (365)
T ss_pred CeEEEEeecc----CccHHHHHHHHHHHhhhccceEEEEecCcchhhhHH-------H--------------HhcCCeEE
Confidence 6899998763 499999999999999999999999986533211100 0 01244444
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+..+.... ... ..+.+ ..++...+||+||+|.++..+++..+... ..++|+|+++|+..+...
T Consensus 56 ~~~~~~~~~---~~~-----~~~~~--~~~~~~~~~div~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~ 119 (365)
T cd03807 56 CLGKRPGRP---DPG-----ALLRL--YKLIRRLRPDVVHTWMYHADLYGGLAARL------AGVPPVIWGIRHSDLDLG 119 (365)
T ss_pred EEecccccc---cHH-----HHHHH--HHHHHhhCCCEEEeccccccHHHHHHHHh------cCCCcEEEEecCCccccc
Confidence 443221100 000 00011 12345678999999987766655544331 257899999999532100
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
+ +.. .+ ...+.+...+.+|.++++|+...+.+... |+ +..++.+|+||
T Consensus 120 ---------~----~~~--~~-------~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--~~--------~~~~~~vi~~~ 167 (365)
T cd03807 120 ---------K----KST--RL-------VARLRRLLSSFIPLIVANSAAAAEYHQAI--GY--------PPKKIVVIPNG 167 (365)
T ss_pred ---------c----hhH--hH-------HHHHHHHhccccCeEEeccHHHHHHHHHc--CC--------ChhheeEeCCC
Confidence 0 000 00 12244556678899999999888776641 21 45789999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--C
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--Q 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~ 596 (617)
+|...|.+... .+..++++++++ ++.++|+|+||+.+.||++.+++|+..+.+ .
T Consensus 168 ~~~~~~~~~~~----------------------~~~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~ 223 (365)
T cd03807 168 VDTERFSPDLD----------------------ARARLREELGLP--EDTFLIGIVARLHPQKDHATLLRAAALLLKKFP 223 (365)
T ss_pred cCHHhcCCccc----------------------chHHHHHhcCCC--CCCeEEEEecccchhcCHHHHHHHHHHHHHhCC
Confidence 99887755311 123356778886 467899999999999999999999998865 4
Q ss_pred CcEEEEEecChh
Q 007130 597 DVQLSHVGHWQT 608 (617)
Q Consensus 597 dv~LVIvG~G~~ 608 (617)
+++|+|+|.|+.
T Consensus 224 ~~~l~i~G~~~~ 235 (365)
T cd03807 224 NARLLLVGDGPD 235 (365)
T ss_pred CeEEEEecCCcc
Confidence 899999999863
No 41
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.70 E-value=5.8e-16 Score=167.71 Aligned_cols=240 Identities=21% Similarity=0.204 Sum_probs=135.1
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
|||+|...|++ -..+||++|+++||+|+|+++........ ||+++
T Consensus 1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~~~--------------------------~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPPPG--------------------------GVRVV 45 (396)
T ss_pred CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCCCC--------------------------CeeEE
Confidence 68999988743 14679999999999999999875432110 23333
Q ss_pred EecCccccccCCCcCCCCCCccc------ccc--cccc-ccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEE
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPW------YVP--CGGV-CYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLV 429 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~------~l~--~~~v-~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~T 429 (617)
.+..+.... ...+.+...... .++ +..+ ..+++|||||+|.... .+++++.. ..++|+|.+
T Consensus 46 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~------~~~~~~v~~ 115 (396)
T cd03818 46 RYRPPRGPT--SGTHPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDV------WPDAPLIGY 115 (396)
T ss_pred EecCCCCCC--CCCCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHh------CCCCCEEEE
Confidence 332211100 011111110000 000 0011 2456899999996432 22334432 246888887
Q ss_pred EeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCC
Q 007130 430 IHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVD 509 (617)
Q Consensus 430 iH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~ 509 (617)
+|-. +...+....+. -..+.......++.. ...+....++.||.||++|+..++.+... ..
T Consensus 116 ~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~ad~vi~~s~~~~~~~~~~------------~~ 176 (396)
T cd03818 116 FEFY-YRAEGADVGFD-PEFPPSLDDALRLRN-----RNALILLALAQADAGVSPTRWQRSTFPAE------------LR 176 (396)
T ss_pred Eeee-ecCCCCCCCCC-CCCCCchhHHHHHHH-----hhhHhHHHHHhCCEEECCCHHHHhhCcHh------------hc
Confidence 7642 11000000000 000000000000000 01123467889999999999887765431 13
Q ss_pred CcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeC-CccccCHHHHHH
Q 007130 510 WKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGR-LDHQKGVDLIAE 588 (617)
Q Consensus 510 ~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGR-L~~qKGvdlLIe 588 (617)
.++.|||||||++.|.|.... ...++...++. ++.++|+|+|| +.++||++.|++
T Consensus 177 ~ki~vI~ngvd~~~f~~~~~~----------------------~~~~~~~~~~~--~~~~~i~~vgR~l~~~Kg~~~ll~ 232 (396)
T cd03818 177 SRISVIHDGIDTDRLRPDPQA----------------------RLRLPNGRVLT--PGDEVITFVARNLEPYRGFHVFMR 232 (396)
T ss_pred cceEEeCCCccccccCCCchh----------------------hhcccccccCC--CCCeEEEEECCCcccccCHHHHHH
Confidence 689999999999999764210 00111222232 45789999998 999999999999
Q ss_pred HHHhccC--CCcEEEEEecC
Q 007130 589 AIPWMMG--QDVQLSHVGHW 606 (617)
Q Consensus 589 A~~~L~~--~dv~LVIvG~G 606 (617)
|++.+.+ .+++|+|+|++
T Consensus 233 a~~~l~~~~~~~~lvivG~~ 252 (396)
T cd03818 233 ALPRLLRARPDARVVIVGGD 252 (396)
T ss_pred HHHHHHHHCCCcEEEEEcCC
Confidence 9998865 48999999974
No 42
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.70 E-value=9.3e-17 Score=178.41 Aligned_cols=273 Identities=21% Similarity=0.238 Sum_probs=157.6
Q ss_pred EcCccCCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEecCCCCCC--C--CCCCC---cceeE-eeccccceEEEEEeeeC
Q 007130 283 VAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVAPHYGNYA--E--PQDTG---IRKRY-RVDRQDIEVAYFQAYID 353 (617)
Q Consensus 283 Vt~e~~P~~~~GGlg~~v~~LakaLa~-~GheV~Vv~p~y~~~~--~--~~~~~---~~~~~-~~~g~~~~~~v~~~~~~ 353 (617)
+++|..- ++||+-+++..-|..+++ .|-+..++.|...... + ..+.. +.... ........+.+-+..++
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 4555544 899999999999999875 6999999999754211 1 00000 00000 01122244555555677
Q ss_pred CcEE-EEecCccccccCC-------------CcCCCCC--C-ccccccccc----c---ccCCCCcEEEEcCcchhHHHH
Q 007130 354 GVDF-VFLDSPLFRHLGN-------------NIYGGGR--E-IPWYVPCGG----V---CYGDGNLVFIANDWHTALLPV 409 (617)
Q Consensus 354 gV~v-~~i~~p~~~~~~~-------------~iy~~~~--~-~~~~l~~~~----v---~~~~~pDIIHaHd~~tal~~~ 409 (617)
|.+. +++|.-.++.... .+.++.. + ..|...++. + +...++||+|+|+|++++++.
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~nea~~fgy~~~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~ 164 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEGDRETNDAIIFGFLVAWFLGEFAEQFDDEPAVVAHFHEWQAGVGLP 164 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCCCeEEEEcchhHhHHHH
Confidence 7664 4445432221100 1111110 0 011111111 1 123579999999999999988
Q ss_pred HHHHHhhhccCCCCceEEEEEeCCcccCCC--CCC-cccccCCCcccccc-ccccCCCCchhHHHHHHHHhhcCeeEEeC
Q 007130 410 YLKAYYRDNGLMQYTRSLLVIHNIAHQGRG--PVS-DFVYTDLPGHYLDL-FKLYDPVGGEHFNIFAAGLKTADRVVTVS 485 (617)
Q Consensus 410 ~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~--p~~-~~~~~glp~~~~~~-l~~~d~~~g~~~~l~k~~l~~AD~VIaVS 485 (617)
+++.. ...+|+|+|+|.+. .|++ ... ++ +..+...-.+. ...+. . .....+++++...||++||||
T Consensus 165 ~lK~~------~~~VptVfTtHAT~-~GR~l~~g~~~~-y~~l~~~~~d~eA~~~~-I-~~r~~iE~~aa~~Ad~fttVS 234 (590)
T cd03793 165 LLRKR------KVDVSTIFTTHATL-LGRYLCAGNVDF-YNNLDYFDVDKEAGKRG-I-YHRYCIERAAAHCAHVFTTVS 234 (590)
T ss_pred HHHHh------CCCCCEEEEecccc-cccccccCCccc-chhhhhcchhhhhhccc-c-hHHHHHHHHHHhhCCEEEECC
Confidence 88742 36889999999853 3442 111 00 00010000000 00000 0 013458999999999999999
Q ss_pred HHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHH--------HHHH
Q 007130 486 RGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCK--------AALQ 557 (617)
Q Consensus 486 ~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K--------~~Lr 557 (617)
+.+++++.. +|+.++++ |||||||.+.|.+..+. .+ -+..+| ..++
T Consensus 235 ~it~~E~~~---------Ll~~~pd~--ViPNGid~~~f~~~~e~-------~~--------~~~~~k~ki~~f~~~~~~ 288 (590)
T cd03793 235 EITAYEAEH---------LLKRKPDV--VLPNGLNVKKFSALHEF-------QN--------LHAQSKEKINEFVRGHFY 288 (590)
T ss_pred hHHHHHHHH---------HhCCCCCE--EeCCCcchhhcccchhh-------hh--------hhHHhhhhhhHHHHHHHh
Confidence 999999875 23335666 99999999999764210 00 011122 2245
Q ss_pred HHhCCCCCCCCcEEEE-EeCCcc-ccCHHHHHHHHHhccC
Q 007130 558 REFGLPVRDDVPVIGF-IGRLDH-QKGVDLIAEAIPWMMG 595 (617)
Q Consensus 558 ~~lGl~~~~d~~vIlf-VGRL~~-qKGvdlLIeA~~~L~~ 595 (617)
.+++++ +++++|+| +||+++ +||+|.||+|+++|-.
T Consensus 289 ~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~ 326 (590)
T cd03793 289 GHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNY 326 (590)
T ss_pred hhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHH
Confidence 556764 46778878 799998 9999999999998854
No 43
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.69 E-value=9.1e-16 Score=159.93 Aligned_cols=255 Identities=22% Similarity=0.225 Sum_probs=152.8
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
|||+|+..++|. .||.+.++..|+++|+++||+|+++++........... . ......+++.++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYK----G-----------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccc----c-----------ceEEecCCeEEE
Confidence 799999988885 59999999999999999999999999764432111000 0 001233456655
Q ss_pred EecCccccccCCCcCCCC-CCccccccc-cccc-cCCCCcEEEEcCcch-hHHHHHHHHHhhhccCCCCceEEEEEeCCc
Q 007130 359 FLDSPLFRHLGNNIYGGG-REIPWYVPC-GGVC-YGDGNLVFIANDWHT-ALLPVYLKAYYRDNGLMQYTRSLLVIHNIA 434 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~-~~~~~~l~~-~~v~-~~~~pDIIHaHd~~t-al~~~~l~~~~~~~~~~~~iPvV~TiH~~~ 434 (617)
.+....... ...+... ....+.... ..+. ...+||+||+|.+.. ...+..... . ..++|+|+++|+..
T Consensus 64 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~--~----~~~~~~i~~~h~~~ 135 (394)
T cd03794 64 RVPLPPYKK--NGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLA--R----LKGAPFVLEVRDLW 135 (394)
T ss_pred EEecCCCCc--cchHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHH--H----hcCCCEEEEehhhc
Confidence 543321110 0000000 000000000 0111 366899999997332 222222111 1 24789999999952
Q ss_pred ccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEE
Q 007130 435 HQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSG 514 (617)
Q Consensus 435 ~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~v 514 (617)
. .............. ...+ ...+++..++.+|.|+++|+.+++.+.. .+ .+..++.+
T Consensus 136 ~-----~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~d~vi~~s~~~~~~~~~--~~--------~~~~~~~~ 192 (394)
T cd03794 136 P-----ESAVALGLLKNGSL-LYRL-------LRKLERLIYRRADAIVVISPGMREYLVR--RG--------VPPEKISV 192 (394)
T ss_pred c-----hhHHHccCccccch-HHHH-------HHHHHHHHHhcCCEEEEECHHHHHHHHh--cC--------CCcCceEE
Confidence 1 11000000000000 0001 2245677889999999999999887762 22 14678999
Q ss_pred EecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc
Q 007130 515 IVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM 594 (617)
Q Consensus 515 IpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~ 594 (617)
||||+|...+.+... . . .+..+... .+..+|+|+||+.++||++.+++|+..+.
T Consensus 193 i~~~~~~~~~~~~~~--------------------~---~-~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~~~~~l~ 246 (394)
T cd03794 193 IPNGVDLELFKPPPA--------------------D---E-SLRKELGL--DDKFVVLYAGNIGRAQGLDTLLEAAALLK 246 (394)
T ss_pred cCCCCCHHHcCCccc--------------------h---h-hhhhccCC--CCcEEEEEecCcccccCHHHHHHHHHHHh
Confidence 999999877755311 0 0 02222322 45789999999999999999999999987
Q ss_pred CC-CcEEEEEecCh
Q 007130 595 GQ-DVQLSHVGHWQ 607 (617)
Q Consensus 595 ~~-dv~LVIvG~G~ 607 (617)
+. +++|+|+|.|+
T Consensus 247 ~~~~~~l~i~G~~~ 260 (394)
T cd03794 247 DRPDIRFLIVGDGP 260 (394)
T ss_pred hcCCeEEEEeCCcc
Confidence 65 89999999986
No 44
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.68 E-value=1.2e-15 Score=158.59 Aligned_cols=233 Identities=25% Similarity=0.218 Sum_probs=140.3
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|++.++|. ..||.+.++..|+++|+++||+|+|+++........... .. ........ ..
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~-~~-----------~~~~~~~~----~~ 63 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEV-IG-----------VVVYGRPI----DE 63 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccccc-cc-----------ceeecccc----cc
Confidence 799999998885 579999999999999999999999999765432211000 00 00000000 00
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.......... ....... ..........++...+||+||+|.+.....++ +.. .+ ..++|+|+++|+... .
T Consensus 64 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~-~~~-~~----~~~~~~i~~~hd~~~--~ 133 (359)
T cd03823 64 VLRSALPRDL-FHLSDYD-NPAVVAEFARLLEDFRPDVVHFHHLQGLGVSI-LRA-AR----DRGIPIVLTLHDYWL--I 133 (359)
T ss_pred ccCCCchhhh-hHHHhcc-CHHHHHHHHHHHHHcCCCEEEECCccchHHHH-HHH-HH----hcCCCEEEEEeeeee--e
Confidence 0000000000 0000000 00000001234456789999999863322222 111 11 256899999998421 1
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
++.. .+ .....|.++++|+.+++.+... +. ...++.+|+||
T Consensus 134 ~~~~--------------------------~~---~~~~~d~ii~~s~~~~~~~~~~--~~--------~~~~~~vi~n~ 174 (359)
T cd03823 134 CPRQ--------------------------GL---FKKGGDAVIAPSRFLLDRYVAN--GL--------FAEKISVIRNG 174 (359)
T ss_pred cchh--------------------------hh---hccCCCEEEEeCHHHHHHHHHc--CC--------CccceEEecCC
Confidence 1100 00 1122399999999988877642 11 24689999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCc
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDV 598 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv 598 (617)
+|...+.+... +. ..+.++|+|+||+.++||++.+++|+..+.+.++
T Consensus 175 ~~~~~~~~~~~-------------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~ 221 (359)
T cd03823 175 IDLDRAKRPRR-------------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDI 221 (359)
T ss_pred cChhhcccccc-------------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHHHHhcCc
Confidence 99987754210 11 1356789999999999999999999998876689
Q ss_pred EEEEEecChhhh
Q 007130 599 QLSHVGHWQTRF 610 (617)
Q Consensus 599 ~LVIvG~G~~~~ 610 (617)
+|+|+|.|+...
T Consensus 222 ~l~i~G~~~~~~ 233 (359)
T cd03823 222 ELVIVGNGLELE 233 (359)
T ss_pred EEEEEcCchhhh
Confidence 999999997543
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=1.4e-15 Score=158.48 Aligned_cols=236 Identities=20% Similarity=0.158 Sum_probs=145.8
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|+..|+|. .||.+.++..|+++|.++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999999884 6999999999999999999999999976532111000 000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchh-HHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTA-LLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~ta-l~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
.+..+.+........ ..+.+ ...+...+||+||+|.+... +.+..+. + ..++|+++++|+...+
T Consensus 56 ~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~pdii~~~~~~~~~~~~~~~~---~----~~~~~~i~~~~~~~~~- 120 (364)
T cd03814 56 SVPLPGYPEIRLALP-----PRRRV--RRLLDAFAPDVVHIATPGPLGLAALRAA---R----RLGIPVVTSYHTDFPE- 120 (364)
T ss_pred ccccCcccceEeccc-----chhhH--HHHHHhcCCCEEEEeccchhhHHHHHHH---H----HcCCCEEEEEecChHH-
Confidence 000010000000000 00001 12334668999999965332 2222221 1 2679999999984211
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
.... ... .. .... ...++++.++.+|.++++|+.+.+.+.. . ...++.+++|
T Consensus 121 ~~~~----~~~---~~---~~~~------~~~~~~~~~~~~d~i~~~s~~~~~~~~~--~----------~~~~~~~~~~ 172 (364)
T cd03814 121 YLRY----YGL---GP---LSWL------AWAYLRWFHNRADRVLVPSPSLADELRA--R----------GFRRVRLWPR 172 (364)
T ss_pred Hhhh----ccc---ch---HhHh------hHHHHHHHHHhCCEEEeCCHHHHHHHhc--c----------CCCceeecCC
Confidence 0000 000 00 0000 1235667788999999999988874432 1 2457899999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC-C
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-Q 596 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-~ 596 (617)
|+|.+.|.|... +...+++++ + .+.++|+|+||+.+.||++.+++|+..+.+ .
T Consensus 173 g~~~~~~~~~~~-----------------------~~~~~~~~~-~--~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~ 226 (364)
T cd03814 173 GVDTELFHPRRR-----------------------DEALRARLG-P--PDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226 (364)
T ss_pred CccccccCcccc-----------------------cHHHHHHhC-C--CCCeEEEEEeccccccCHHHHHHHHHHhhhcC
Confidence 999988866321 012344454 2 356799999999999999999999999876 3
Q ss_pred CcEEEEEecChh
Q 007130 597 DVQLSHVGHWQT 608 (617)
Q Consensus 597 dv~LVIvG~G~~ 608 (617)
+++|+|+|.|+.
T Consensus 227 ~~~l~i~G~~~~ 238 (364)
T cd03814 227 PVRLVIVGDGPA 238 (364)
T ss_pred CceEEEEeCCch
Confidence 899999999863
No 46
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.68 E-value=7.3e-16 Score=164.91 Aligned_cols=225 Identities=16% Similarity=0.160 Sum_probs=137.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCc
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR--GHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~--GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV 355 (617)
|||++++.. .| ..||+++++..|+++|.++ ||+|.|+++....... . . ... .+. ...+.+
T Consensus 1 mkI~~~~~~-~~--~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~-~---~~~---------~~~-~~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEA-VS--GFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-W-L---KEI---------KYA-QSFSNI 62 (359)
T ss_pred CeeEEeccc-cc--CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-H-H---Hhc---------chh-cccccc
Confidence 899999874 34 3699999999999999999 8999999976542110 0 0 000 000 000111
Q ss_pred EEEEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcc
Q 007130 356 DFVFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 435 (617)
Q Consensus 356 ~v~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~ 435 (617)
.+.++..+ .. .+.+ ..+++..+|||||+|+....+++..++... ....+++.+.|.. .
T Consensus 63 ~~~~~~~~-------~~-------~~~l--~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~h~~-~ 120 (359)
T PRK09922 63 KLSFLRRA-------KH-------VYNF--SKWLKETQPDIVICIDVISCLYANKARKKS-----GKQFKIFSWPHFS-L 120 (359)
T ss_pred hhhhhccc-------HH-------HHHH--HHHHHhcCCCEEEEcCHHHHHHHHHHHHHh-----CCCCeEEEEecCc-c
Confidence 11000000 00 0111 234567789999999865555444444321 1234566667752 1
Q ss_pred cCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEE
Q 007130 436 QGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGI 515 (617)
Q Consensus 436 qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vI 515 (617)
+.. . . .....+..+|.++++|+..++.+.. .|. +..++.+|
T Consensus 121 ----~~~----------~-------------~--~~~~~~~~~d~~i~~S~~~~~~~~~--~~~--------~~~ki~vi 161 (359)
T PRK09922 121 ----DHK----------K-------------H--AECKKITCADYHLAISSGIKEQMMA--RGI--------SAQRISVI 161 (359)
T ss_pred ----ccc----------c-------------h--hhhhhhhcCCEEEEcCHHHHHHHHH--cCC--------CHHHEEEE
Confidence 000 0 0 0011236799999999999888764 221 45689999
Q ss_pred ecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCc--cccCHHHHHHHHHhc
Q 007130 516 VNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLD--HQKGVDLIAEAIPWM 593 (617)
Q Consensus 516 pNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~--~qKGvdlLIeA~~~L 593 (617)
|||||.+.|.... +...+.++|+|+|||. ++||++.|++|++.+
T Consensus 162 ~N~id~~~~~~~~----------------------------------~~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~ 207 (359)
T PRK09922 162 YNPVEIKTIIIPP----------------------------------PERDKPAVFLYVGRLKFEGQKNVKELFDGLSQT 207 (359)
T ss_pred cCCCCHHHccCCC----------------------------------cccCCCcEEEEEEEEecccCcCHHHHHHHHHhh
Confidence 9999975542110 0012457899999997 469999999999987
Q ss_pred cCCCcEEEEEecCh--hhhHHHHHh
Q 007130 594 MGQDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 594 ~~~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
.. +++|+|+|+|+ ..+++.+++
T Consensus 208 ~~-~~~l~ivG~g~~~~~l~~~~~~ 231 (359)
T PRK09922 208 TG-EWQLHIIGDGSDFEKCKAYSRE 231 (359)
T ss_pred CC-CeEEEEEeCCccHHHHHHHHHH
Confidence 53 89999999997 456555553
No 47
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.66 E-value=5.7e-15 Score=154.37 Aligned_cols=225 Identities=21% Similarity=0.195 Sum_probs=137.3
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|+. ++|. .||+++++..|+++|.+.||+|.+++......... ... ........
T Consensus 1 kI~~v~~-~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~-~~~-------------------~~~~~~~~ 57 (366)
T cd03822 1 RIALVSP-YPPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL-YGG-------------------EQEVVRVI 57 (366)
T ss_pred CeEEecC-CCCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc-CCC-------------------cccceeee
Confidence 7999986 4563 89999999999999999999999998654321110 000 00000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
....+ . .+.. ....+...+|||||+|.|...+.+......... ....++|+|+++|+....
T Consensus 58 ~~~~~---------~------~~~~-~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~h~~~~~-- 118 (366)
T cd03822 58 VLDNP---------L------DYRR-AARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLL-LRGLGIPVVVTLHTVLLH-- 118 (366)
T ss_pred ecCCc---------h------hHHH-HHHHHhhcCCCEEEEeeccccccchhhHHHHHH-HhhcCCCEEEEEecCCcc--
Confidence 00000 0 0000 012345568999999986543322221111100 012688999999995110
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.+. .. ...+++..++.+|.|+++|.....++... ....++.+|+||
T Consensus 119 ~~~----------~~-------------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-----------~~~~~~~~i~~~ 164 (366)
T cd03822 119 EPR----------PG-------------DRALLRLLLRRADAVIVMSSELLRALLLR-----------AYPEKIAVIPHG 164 (366)
T ss_pred ccc----------hh-------------hhHHHHHHHhcCCEEEEeeHHHHHHHHhh-----------cCCCcEEEeCCC
Confidence 000 00 11345667789999999974433333211 014699999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ-- 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~-- 596 (617)
+|...+.+.. .. ++...+ .+.++|+|+||+.++||++.|++|+..+.+.
T Consensus 165 ~~~~~~~~~~--------------------------~~-~~~~~~--~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~ 215 (366)
T cd03822 165 VPDPPAEPPE--------------------------SL-KALGGL--DGRPVLLTFGLLRPYKGLELLLEALPLLVAKHP 215 (366)
T ss_pred CcCcccCCch--------------------------hh-HhhcCC--CCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCC
Confidence 9986664321 01 222222 3578999999999999999999999998763
Q ss_pred CcEEEEEecChh
Q 007130 597 DVQLSHVGHWQT 608 (617)
Q Consensus 597 dv~LVIvG~G~~ 608 (617)
+++|+|+|.|..
T Consensus 216 ~~~l~i~G~~~~ 227 (366)
T cd03822 216 DVRLLVAGETHP 227 (366)
T ss_pred CeEEEEeccCcc
Confidence 899999999864
No 48
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.66 E-value=2.2e-15 Score=159.57 Aligned_cols=234 Identities=16% Similarity=0.044 Sum_probs=142.4
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||+++++.|+| +.++++.+++++|. ||+|++++............ ..++..+
T Consensus 1 ~~~~~~~~~~~-----~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 52 (367)
T cd05844 1 RVLIFRPLLLA-----PSETFVRNQAEALR--RFRPVYVGGRRLGPAPLGAL---------------------AVRLADL 52 (367)
T ss_pred CEEEEeCCCCC-----CchHHHHHHHHhcc--cCCcEEEEeeccCCCCCccc---------------------ceeeeec
Confidence 68999988866 28999999999994 78888887654322111000 0011111
Q ss_pred EecCcccc-ccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 359 FLDSPLFR-HLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~-~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
........ ......+.. .+. ...+++..+|||||+|....++.+..+.+ ..++|+|+|+|+.....
T Consensus 53 ~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~dvvh~~~~~~~~~~~~~~~-------~~~~p~i~~~h~~~~~~ 119 (367)
T cd05844 53 AGGKAGLRLGALRLLTGS----APQ--LRRLLRRHRPDLVHAHFGFDGVYALPLAR-------RLGVPLVVTFHGFDATT 119 (367)
T ss_pred ccchhHHHHHHHHhcccc----ccH--HHHHHHhhCCCEEEeccCchHHHHHHHHH-------HcCCCEEEEEeCccccc
Confidence 00000000 000000000 000 11234567899999997665554444332 25899999999843211
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
. +. . ..... ..+ ...+++..++.+|.|+++|+.+++.+... | .+..++.+|+|
T Consensus 120 ~-~~--~---~~~~~----~~~-------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~--------~~~~~i~vi~~ 172 (367)
T cd05844 120 S-LA--L---LLRSR----WAL-------YARRRRRLARRAALFIAVSQFIRDRLLAL--G--------FPPEKVHVHPI 172 (367)
T ss_pred c-ch--h---hcccc----hhH-------HHHHHHHHHHhcCEEEECCHHHHHHHHHc--C--------CCHHHeEEecC
Confidence 0 00 0 00000 000 12345667789999999999988887642 2 14678999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-- 595 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-- 595 (617)
|+|.+.|.|... ..+.++|+|+||+.+.||++.|++|++.+.+
T Consensus 173 g~d~~~~~~~~~-----------------------------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~ 217 (367)
T cd05844 173 GVDTAKFTPATP-----------------------------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRV 217 (367)
T ss_pred CCCHHhcCCCCC-----------------------------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhC
Confidence 999887765210 1245789999999999999999999998865
Q ss_pred CCcEEEEEecCh--hhhHHHHH
Q 007130 596 QDVQLSHVGHWQ--TRFGRDAE 615 (617)
Q Consensus 596 ~dv~LVIvG~G~--~~~e~~l~ 615 (617)
.+++|+|+|+|+ ..+.+.++
T Consensus 218 ~~~~l~ivG~g~~~~~~~~~~~ 239 (367)
T cd05844 218 PEVRLVIIGDGPLLAALEALAR 239 (367)
T ss_pred CCeEEEEEeCchHHHHHHHHHH
Confidence 489999999986 33444443
No 49
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.66 E-value=2.4e-15 Score=173.16 Aligned_cols=168 Identities=15% Similarity=0.131 Sum_probs=103.1
Q ss_pred cccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEE-EEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 388 VCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLL-VIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 388 v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~-TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
+++..+|||||+|...+.+++.++.. +.++|+|+ +.|+.... ..+ ..+ ++
T Consensus 395 ~lk~~kpDIVH~h~~~a~~lg~lAa~-------~~gvPvIv~t~h~~~~~-~~~----------~~~----~~------- 445 (694)
T PRK15179 395 VMRSSVPSVVHIWQDGSIFACALAAL-------LAGVPRIVLSVRTMPPV-DRP----------DRY----RV------- 445 (694)
T ss_pred HHHHcCCcEEEEeCCcHHHHHHHHHH-------HcCCCEEEEEeCCCccc-cch----------hHH----HH-------
Confidence 45677899999999877666665543 25688876 66763210 000 000 00
Q ss_pred hHHHHHHHHhh--cCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccc
Q 007130 467 HFNIFAAGLKT--ADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDT 544 (617)
Q Consensus 467 ~~~l~k~~l~~--AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~ 544 (617)
........+.. ++.+|++|...++.+... +| .+..++.|||||||...|.|...
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~-~g--------~~~~kI~VI~NGVd~~~f~~~~~--------------- 501 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYADW-LG--------VDERRIPVVYNGLAPLKSVQDDA--------------- 501 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHHH-cC--------CChhHEEEECCCcCHHhcCCCch---------------
Confidence 00111112233 345666676666665432 23 26789999999999888864210
Q ss_pred ccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecCh--hhhHHHHHh
Q 007130 545 LHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 545 ~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
.+. .+..+......+.++|+++|||.++||++.||+|++.+.+ .+++|+|+|+|+ ..+++++++
T Consensus 502 -------~~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~ 569 (694)
T PRK15179 502 -------CTA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQR 569 (694)
T ss_pred -------hhH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHH
Confidence 000 1111211111346799999999999999999999998865 489999999997 456666654
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.66 E-value=6.9e-15 Score=154.72 Aligned_cols=227 Identities=18% Similarity=0.146 Sum_probs=140.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
|||++++.. + ..||.++++..|+++|.++||+|+|++.....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~~---------------------------------- 42 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKKA---------------------------------- 42 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecch----------------------------------
Confidence 899999863 3 46999999999999999999999999854210
Q ss_pred EEecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 358 VFLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 358 ~~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
+. ..+...+|||||+|.+..+.+...+...+ ..++|+|+|+|+.....
T Consensus 43 -------~~--------------------~~~~~~~~diih~~~~~~~~~~~~~~~~~-----~~~~~~v~~~hd~~~~~ 90 (365)
T cd03825 43 -------LI--------------------SKIEIINADIVHLHWIHGGFLSIEDLSKL-----LDRKPVVWTLHDMWPFT 90 (365)
T ss_pred -------hh--------------------hChhcccCCEEEEEccccCccCHHHHHHH-----HcCCCEEEEcccCcccc
Confidence 00 01123469999999866555443332211 14789999999853210
Q ss_pred ---CCCCCcccccCCCccccccccccCC--CCchhHHHHHHHH-hhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCc
Q 007130 438 ---RGPVSDFVYTDLPGHYLDLFKLYDP--VGGEHFNIFAAGL-KTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWK 511 (617)
Q Consensus 438 ---~~p~~~~~~~glp~~~~~~l~~~d~--~~g~~~~l~k~~l-~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~k 511 (617)
..+.....+........ ....+.. .....+......+ ..++.++++|+.+++.+.+. ++ .+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~-~~--------~~~~~ 160 (365)
T cd03825 91 GGCHYPGGCDRYKTECGNCP-QLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS-SL--------FKGIP 160 (365)
T ss_pred cccCCccccccccccCCCCC-CCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc-cc--------cCCCc
Confidence 00000000000000000 0000000 0000111111122 45778999998887776542 11 14679
Q ss_pred EEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCcc--ccCHHHHHHH
Q 007130 512 LSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDH--QKGVDLIAEA 589 (617)
Q Consensus 512 I~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~--qKGvdlLIeA 589 (617)
+.+||||||.+.|.|.. +...++.++++ ++..++++.|+... +||++.+++|
T Consensus 161 ~~vi~ngi~~~~~~~~~------------------------~~~~~~~~~~~--~~~~~i~~~~~~~~~~~K~~~~ll~a 214 (365)
T cd03825 161 IEVIPNGIDTTIFRPRD------------------------KREARKRLGLP--ADKKIILFGAVGGTDPRKGFDELIEA 214 (365)
T ss_pred eEEeCCCCcccccCCCc------------------------HHHHHHHhCCC--CCCeEEEEEecCCCccccCHHHHHHH
Confidence 99999999998886531 23356777876 35677888888765 8999999999
Q ss_pred HHhccC---CCcEEEEEecChhhh
Q 007130 590 IPWMMG---QDVQLSHVGHWQTRF 610 (617)
Q Consensus 590 ~~~L~~---~dv~LVIvG~G~~~~ 610 (617)
++.+.+ .+++|+++|.|+...
T Consensus 215 ~~~l~~~~~~~~~~~i~G~~~~~~ 238 (365)
T cd03825 215 LKRLAERWKDDIELVVFGASDPEI 238 (365)
T ss_pred HHHhhhccCCCeEEEEeCCCchhh
Confidence 998875 589999999987543
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.65 E-value=2.1e-15 Score=157.51 Aligned_cols=239 Identities=16% Similarity=0.104 Sum_probs=149.5
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..+.|. ..||+++++.+|+++|++.||+|+++++........... . . .... ..
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~---~----------~----~~~~---~~ 59 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPL---R----------A----ALRL---LL 59 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccc---h----------h----cccc---cc
Confidence 689999888774 589999999999999999999999999875432211000 0 0 0000 00
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
..... ..........|.. .......+|||||+|.+...+. + ..++|+|+++|++.+..
T Consensus 60 ---~~~~~----~~~~~~~~~~~~~--~~~~~~~~~Dii~~~~~~~~~~----~--------~~~~~~i~~~hd~~~~~- 117 (365)
T cd03809 60 ---RLPRR----LLWGLLFLLRAGD--RLLLLLLGLDLLHSPHNTAPLL----R--------LRGVPVVVTIHDLIPLR- 117 (365)
T ss_pred ---ccccc----cccchhhHHHHHH--HHHhhhcCCCeeeecccccCcc----c--------CCCCCEEEEeccchhhh-
Confidence 00000 0000000000111 0122346799999998765333 1 36899999999953211
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.+.. ..... ... ...+++..++.+|.++++|+.+++.+... ++ .+..++.+|+||
T Consensus 118 ~~~~------~~~~~---~~~-------~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-~~--------~~~~~~~vi~~~ 172 (365)
T cd03809 118 FPEY------FSPGF---RRY-------FRRLLRRALRRADAIITVSEATKRDLLRY-LG--------VPPDKIVVIPLG 172 (365)
T ss_pred Cccc------CCHHH---HHH-------HHHHHHHHHHHcCEEEEccHHHHHHHHHH-hC--------cCHHHEEeeccc
Confidence 0100 00000 000 22456778899999999999999888752 22 145789999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ-- 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~-- 596 (617)
+|...+.+..+ .. +...... .+.++|+|+||+.++||++.+++|+..+...
T Consensus 173 ~~~~~~~~~~~------------------------~~-~~~~~~~--~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~ 225 (365)
T cd03809 173 VDPRFRPPPAE------------------------AE-VLRALYL--LPRPYFLYVGTIEPRKNLERLLEAFARLPAKGP 225 (365)
T ss_pred cCccccCCCch------------------------HH-HHHHhcC--CCCCeEEEeCCCccccCHHHHHHHHHHHHHhcC
Confidence 99887754210 00 2222222 3578999999999999999999999998764
Q ss_pred CcEEEEEecChhhhHH
Q 007130 597 DVQLSHVGHWQTRFGR 612 (617)
Q Consensus 597 dv~LVIvG~G~~~~e~ 612 (617)
+++|+|+|.+....+.
T Consensus 226 ~~~l~i~G~~~~~~~~ 241 (365)
T cd03809 226 DPKLVIVGKRGWLNEE 241 (365)
T ss_pred CCCEEEecCCccccHH
Confidence 5999999987654433
No 52
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.65 E-value=1.1e-14 Score=149.62 Aligned_cols=238 Identities=30% Similarity=0.403 Sum_probs=149.4
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 799999988774 79999999999999999999999999875432211000 000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.... .. ..+.......+......++...+||+||+|++........+.. ..++|+|+++|+..+...
T Consensus 57 ~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~~~~ 123 (374)
T cd03801 57 RPPP--LL----RVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR-------LLGIPLVLTVHGLEFGRP 123 (374)
T ss_pred cCCc--cc----ccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHH-------hcCCcEEEEeccchhhcc
Confidence 0000 00 0000000000000011233556899999999876555432221 368999999999533211
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
... . .. ...+ ...+.+..++.+|.++++|+.+++.+... ++ ....++.+||||
T Consensus 124 ~~~---------~-~~-~~~~-------~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-~~--------~~~~~~~~i~~~ 176 (374)
T cd03801 124 GNE---------L-GL-LLKL-------ARALERRALRRADRIIAVSEATREELREL-GG--------VPPEKITVIPNG 176 (374)
T ss_pred ccc---------h-hH-HHHH-------HHHHHHHHHHhCCEEEEecHHHHHHHHhc-CC--------CCCCcEEEecCc
Confidence 000 0 00 0000 12355677889999999999998887652 21 123689999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ-- 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~-- 596 (617)
+|...|.+.. ...+...... .+.++|+|+||+.+.||++.+++|+..+.+.
T Consensus 177 ~~~~~~~~~~-------------------------~~~~~~~~~~--~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~ 229 (374)
T cd03801 177 VDTERFRPAP-------------------------RAARRRLGIP--EDEPVILFVGRLVPRKGVDLLLEALAKLRKEYP 229 (374)
T ss_pred ccccccCccc-------------------------hHHHhhcCCc--CCCeEEEEecchhhhcCHHHHHHHHHHHhhhcC
Confidence 9988775420 1122222222 3568999999999999999999999988764
Q ss_pred CcEEEEEecCh
Q 007130 597 DVQLSHVGHWQ 607 (617)
Q Consensus 597 dv~LVIvG~G~ 607 (617)
+++|+|+|.|+
T Consensus 230 ~~~l~i~G~~~ 240 (374)
T cd03801 230 DVRLVIVGDGP 240 (374)
T ss_pred CeEEEEEeCcH
Confidence 79999999876
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.64 E-value=6.6e-15 Score=154.25 Aligned_cols=218 Identities=17% Similarity=0.041 Sum_probs=140.1
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
|||+++..|+| |.+.++.+++++|.++||+|+|+++.......... .. ...+..+.
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~-----~~--------------~~~~~~~~ 56 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHP-----ED--------------RAELARTR 56 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccc-----cc--------------cccccchH
Confidence 79999987744 37899999999999999999999977543211000 00 00000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+ ... +.. ..+.......+...+|||||+|.+.......++... ..++|+++++|+....
T Consensus 57 ~~--~~~-------~~~---~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 116 (355)
T cd03799 57 YL--ARS-------LAL---LAQALVLARELRRLGIDHIHAHFGTTPATVAMLASR------LGGIPYSFTAHGKDIF-- 116 (355)
T ss_pred HH--HHH-------HHH---HHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHH------hcCCCEEEEEeccccc--
Confidence 00 000 000 000000011224568999999986543333333221 2478999999974211
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
+.. ...+++..++.+|.|+++|+.+++.+... +| ....++.+|+||
T Consensus 117 -~~~------------------------~~~~~~~~~~~~~~vi~~s~~~~~~l~~~-~~--------~~~~~~~vi~~~ 162 (355)
T cd03799 117 -RSP------------------------DAIDLDEKLARADFVVAISEYNRQQLIRL-LG--------CDPDKIHVVHCG 162 (355)
T ss_pred -ccC------------------------chHHHHHHHhhCCEEEECCHHHHHHHHHh-cC--------CCcccEEEEeCC
Confidence 000 00245667889999999999999888753 22 146789999999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ-- 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~-- 596 (617)
+|.+.|.+... .. ..+...|+|+||+.++||++.+++|+..+.+.
T Consensus 163 ~d~~~~~~~~~-------------------------------~~--~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~ 209 (355)
T cd03799 163 VDLERFPPRPP-------------------------------PP--PGEPLRILSVGRLVEKKGLDYLLEALALLKDRGI 209 (355)
T ss_pred cCHHHcCCccc-------------------------------cc--cCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCC
Confidence 99887754210 00 12457899999999999999999999988763
Q ss_pred CcEEEEEecCh
Q 007130 597 DVQLSHVGHWQ 607 (617)
Q Consensus 597 dv~LVIvG~G~ 607 (617)
+++|+|+|.|+
T Consensus 210 ~~~l~i~G~~~ 220 (355)
T cd03799 210 DFRLDIVGDGP 220 (355)
T ss_pred CeEEEEEECCc
Confidence 89999999987
No 54
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.63 E-value=1.6e-14 Score=148.23 Aligned_cols=235 Identities=22% Similarity=0.201 Sum_probs=146.4
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..+ ..||.+.++..|+++|.+.||+|.|++............ . ........
T Consensus 1 kIl~~~~~~----~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~---~----------------~~~~~~~~ 57 (353)
T cd03811 1 KILFVIPSL----GGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLP---S----------------NVKLIPVR 57 (353)
T ss_pred CeEEEeecc----cCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccc---c----------------chhhhcee
Confidence 689998764 379999999999999999999999998765432110000 0 00000000
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCc-chhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDW-HTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~-~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
.... . .+... ...+. ...++...+||+||+|.+ ...+++.+.. ..++|+|+++|+.....
T Consensus 58 ~~~~---~-----~~~~~-~~~~~--~~~~~~~~~~dii~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~ 118 (353)
T cd03811 58 VLKL---K-----SLRDL-LAILR--LRRLLRKEKPDVVISHLTTTPNVLALLAA--------RLGTKLIVWEHNSLSLE 118 (353)
T ss_pred eeec---c-----cccch-hHHHH--HHHHHHhcCCCEEEEcCccchhHHHHHHh--------hcCCceEEEEcCcchhh
Confidence 0000 0 00000 00011 123345668999999987 3333333221 12789999999953211
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
... .. . ...+++..+..+|.++++|+.+++.+... ++ .+..++.+|+|
T Consensus 119 ~~~-----------~~----~--------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~--------~~~~~~~vi~~ 166 (353)
T cd03811 119 LKR-----------KL----R--------LLLLIRKLYRRADKIVAVSEGVKEDLLKL-LG--------IPPDKIEVIYN 166 (353)
T ss_pred hcc-----------ch----h--------HHHHHHhhccccceEEEeccchhhhHHHh-hc--------CCccccEEecC
Confidence 000 00 0 00245677889999999999998887652 21 13578999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC-
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ- 596 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~- 596 (617)
|+|...|.+... . .. .++.. .+..+|+|+||+.+.||++.+++|+..+...
T Consensus 167 ~~~~~~~~~~~~--------------------~----~~--~~~~~--~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~ 218 (353)
T cd03811 167 PIDIEEIRALAE--------------------E----PL--ELGIP--PDGPVILAVGRLSPQKGFDTLIRAFALLRKEG 218 (353)
T ss_pred CcChhhcCcccc--------------------h----hh--hcCCC--CCceEEEEEecchhhcChHHHHHHHHHhhhcC
Confidence 999887754311 0 00 22322 4568999999999999999999999998763
Q ss_pred -CcEEEEEecCh--hhhHHHHH
Q 007130 597 -DVQLSHVGHWQ--TRFGRDAE 615 (617)
Q Consensus 597 -dv~LVIvG~G~--~~~e~~l~ 615 (617)
+++|+|+|.|+ ..+++.++
T Consensus 219 ~~~~l~i~G~~~~~~~~~~~~~ 240 (353)
T cd03811 219 PDARLVILGDGPLREELEALAK 240 (353)
T ss_pred CCceEEEEcCCccHHHHHHHHH
Confidence 89999999986 34444443
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.62 E-value=3.8e-14 Score=145.44 Aligned_cols=216 Identities=19% Similarity=0.145 Sum_probs=137.1
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++++..+.| .||.++++..|+++|.+.||+|+|+++.... ..... ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 68999987655 7999999999999999999999999976543 11000 01122222
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCC-ceEEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQY-TRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~-iPvV~TiH~~~~qg 437 (617)
.+....... .+.... ..+. ...++...+||+||+|.+.. ..++... ..+ +|+|++.|+.....
T Consensus 56 ~~~~~~~~~----~~~~~~-~~~~--~~~~l~~~~~d~i~~~~~~~---~~~~~~~------~~~~~~~i~~~~~~~~~~ 119 (348)
T cd03820 56 DLGDKRDSK----LLARFK-KLRR--LRKLLKNNKPDVVISFLTSL---LTFLASL------GLKIVKLIVSEHNSPDAY 119 (348)
T ss_pred ecccccccc----hhcccc-chHH--HHHhhcccCCCEEEEcCchH---HHHHHHH------hhccccEEEecCCCccch
Confidence 221110000 000000 0011 12344557899999998761 1112111 123 59999999842110
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
.. . .. ...+++..++.+|.++++|+.++.... . ....++.+|+|
T Consensus 120 --~~-----------~---~~--------~~~~~~~~~~~~d~ii~~s~~~~~~~~----~--------~~~~~~~vi~~ 163 (348)
T cd03820 120 --KK-----------R---LR--------RLLLRRLLYRRADAVVVLTEEDRALYY----K--------KFNKNVVVIPN 163 (348)
T ss_pred --hh-----------h---hH--------HHHHHHHHHhcCCEEEEeCHHHHHHhh----c--------cCCCCeEEecC
Confidence 00 0 00 112367788999999999998762111 1 14678999999
Q ss_pred CCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--
Q 007130 518 GIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-- 595 (617)
Q Consensus 518 GID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-- 595 (617)
|+|...+.+. . ..+.++|+|+||+.+.||++.+++|+..+.+
T Consensus 164 ~~~~~~~~~~----------------------------------~--~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~ 207 (348)
T cd03820 164 PLPFPPEEPS----------------------------------S--DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKH 207 (348)
T ss_pred CcChhhcccc----------------------------------C--CCCCcEEEEEEeeccccCHHHHHHHHHHHHhcC
Confidence 9998665331 0 1246789999999999999999999999874
Q ss_pred CCcEEEEEecCh
Q 007130 596 QDVQLSHVGHWQ 607 (617)
Q Consensus 596 ~dv~LVIvG~G~ 607 (617)
.+++|+|+|.|+
T Consensus 208 ~~~~l~i~G~~~ 219 (348)
T cd03820 208 PDWKLRIVGDGP 219 (348)
T ss_pred CCeEEEEEeCCC
Confidence 489999999986
No 56
>PLN02275 transferase, transferring glycosyl groups
Probab=99.60 E-value=1.8e-14 Score=155.27 Aligned_cols=237 Identities=12% Similarity=-0.008 Sum_probs=137.3
Q ss_pred CCcHHHHHHHHHHHHHHCCC-eEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEEecCccccccCCC
Q 007130 293 TGGLGDVAGALPKALARRGH-RVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNN 371 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~Gh-eV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~~~~~~~~ 371 (617)
-+|.+..+..++..|+++|| +|+|++......... . ....|+.++++..+........
T Consensus 14 ~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~-~--------------------~~~~~v~v~r~~~~~~~~~~~~ 72 (371)
T PLN02275 14 DFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPA-L--------------------LNHPSIHIHLMVQPRLLQRLPR 72 (371)
T ss_pred CCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHH-H--------------------hcCCcEEEEECCCccccccccc
Confidence 57888899999999999886 899998643321110 0 0123456665532211100000
Q ss_pred cCC---CCCCccccccc-cc--cccCCCCcEEEEcCcchh---HHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCC
Q 007130 372 IYG---GGREIPWYVPC-GG--VCYGDGNLVFIANDWHTA---LLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVS 442 (617)
Q Consensus 372 iy~---~~~~~~~~l~~-~~--v~~~~~pDIIHaHd~~ta---l~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~ 442 (617)
+.. +.....|.+.. .. ..+..+|||||+|..+.. +++.++.. ..++|+|+|+|+..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~-------~~~~p~v~~~h~~~~~------ 139 (371)
T PLN02275 73 VLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACW-------LRRAKFVIDWHNFGYT------ 139 (371)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHH-------HhCCCEEEEcCCccHH------
Confidence 000 00000011100 00 124578999999975432 22222222 2578999999985211
Q ss_pred cccccCCC-ccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcC
Q 007130 443 DFVYTDLP-GHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDT 521 (617)
Q Consensus 443 ~~~~~glp-~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~ 521 (617)
....+.. ..... +. ...++++.++.||.||++|+.+++.+.+. +| .++.+|+||+ .
T Consensus 140 -~~~~~~~~~~~~~--~~-------~~~~e~~~~~~ad~ii~~S~~~~~~l~~~-~g-----------~~i~vi~n~~-~ 196 (371)
T PLN02275 140 -LLALSLGRSHPLV--RL-------YRWYERHYGKMADGHLCVTKAMQHELDQN-WG-----------IRATVLYDQP-P 196 (371)
T ss_pred -HHhcccCCCCHHH--HH-------HHHHHHHHHhhCCEEEECCHHHHHHHHHh-cC-----------CCeEEECCCC-H
Confidence 0001110 00000 00 12467788899999999999999887642 22 1288999995 4
Q ss_pred CCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc-------
Q 007130 522 KEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM------- 594 (617)
Q Consensus 522 ~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~------- 594 (617)
+.|.|... . .. +. .....+|+++||+.++||++.|++|+..+.
T Consensus 197 ~~f~~~~~--------------------~-------~~--~~-~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~ 246 (371)
T PLN02275 197 EFFRPASL--------------------E-------IR--LR-PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARL 246 (371)
T ss_pred HHcCcCCc--------------------h-------hc--cc-CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcc
Confidence 66765311 0 00 11 123357889999999999999999998762
Q ss_pred -----------C-CCcEEEEEecCh--hhhHHHHHh
Q 007130 595 -----------G-QDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 595 -----------~-~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
. .+++|+|+|+|+ .++++++++
T Consensus 247 ~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~ 282 (371)
T PLN02275 247 NESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISR 282 (371)
T ss_pred ccccccccccccCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 1 379999999997 467777665
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.58 E-value=1.7e-13 Score=141.55 Aligned_cols=236 Identities=26% Similarity=0.271 Sum_probs=144.5
Q ss_pred EEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEE
Q 007130 280 VILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVF 359 (617)
Q Consensus 280 IL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~ 359 (617)
||++++.++|. ..||.+.++..++++|.+.||+|+|+++........... .. . .........
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~----~~--------~-----~~~~~~~~~ 62 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLL----KG--------R-----LVGVERLPV 62 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhc----cc--------c-----ccccccccc
Confidence 67888877653 479999999999999999999999999764332111000 00 0 000000000
Q ss_pred ecCccccccCCCcCCCCCCccccc--ccccccc--CCCCcEEEEcCcch-hHHHHHHHHHhhhccCCCCceEEEEEeCCc
Q 007130 360 LDSPLFRHLGNNIYGGGREIPWYV--PCGGVCY--GDGNLVFIANDWHT-ALLPVYLKAYYRDNGLMQYTRSLLVIHNIA 434 (617)
Q Consensus 360 i~~p~~~~~~~~iy~~~~~~~~~l--~~~~v~~--~~~pDIIHaHd~~t-al~~~~l~~~~~~~~~~~~iPvV~TiH~~~ 434 (617)
... ..... ...+. .+.. ....++. ..+||+||+|.... .++...+.. ..++|+++++|+..
T Consensus 63 ~~~-~~~~~-~~~~~-----~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~ 128 (377)
T cd03798 63 LLP-VVPLL-KGPLL-----YLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKR-------KLGIPLVVTLHGSD 128 (377)
T ss_pred Ccc-hhhcc-ccchh-----HHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHH-------hcCCCEEEEeecch
Confidence 000 00000 00000 0000 0112334 67899999995432 222222221 25689999999953
Q ss_pred ccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEE
Q 007130 435 HQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSG 514 (617)
Q Consensus 435 ~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~v 514 (617)
.... .. .. + ...+++..++.+|.++++|+.+++.+... + .+..++.+
T Consensus 129 ~~~~-~~----------~~-----~-------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~---------~~~~~~~~ 175 (377)
T cd03798 129 VNLL-PR----------KR-----L-------LRALLRRALRRADAVIAVSEALADELKAL-G---------IDPEKVTV 175 (377)
T ss_pred hccc-Cc----------hh-----h-------HHHHHHHHHhcCCeEEeCCHHHHHHHHHh-c---------CCCCceEE
Confidence 2110 00 00 0 12456778889999999999998887642 1 14678999
Q ss_pred EecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc
Q 007130 515 IVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM 594 (617)
Q Consensus 515 IpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~ 594 (617)
|+||+|...|.+... . + . .+++.. .+.++|+|+||+.+.||++.+++|+..+.
T Consensus 176 i~~~~~~~~~~~~~~--------------------~--~--~-~~~~~~--~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 176 IPNGVDTERFSPADR--------------------A--E--A-RKLGLP--EDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred cCCCcCcccCCCcch--------------------H--H--H-HhccCC--CCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 999999988865311 0 0 0 223332 35689999999999999999999999987
Q ss_pred CC--CcEEEEEecCh
Q 007130 595 GQ--DVQLSHVGHWQ 607 (617)
Q Consensus 595 ~~--dv~LVIvG~G~ 607 (617)
+. +++|+|+|.|+
T Consensus 229 ~~~~~~~l~i~g~~~ 243 (377)
T cd03798 229 KKRPDVHLVIVGDGP 243 (377)
T ss_pred hcCCCeEEEEEcCCc
Confidence 63 89999999986
No 58
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.55 E-value=2.3e-13 Score=140.21 Aligned_cols=228 Identities=19% Similarity=0.169 Sum_probs=144.6
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
||++|+.. .||.+.++..|+++|.++||+|+++++....... ....++.++
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~-----------------------~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEE-----------------------LEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccc-----------------------cccCCceEE
Confidence 68999864 6899999999999999999999999876432210 011234443
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR 438 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~ 438 (617)
.+...... ...+.... ..+. ...++...+||+||+|.+...+++.++... ....++++++|+..+...
T Consensus 52 ~~~~~~~~---~~~~~~~~-~~~~--~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~ 119 (359)
T cd03808 52 PIPLDRRG---INPFKDLK-ALLR--LYRLLRKERPDIVHTHTPKPGILGRLAARL------AGVPKVIYTVHGLGFVFT 119 (359)
T ss_pred eccccccc---cChHhHHH-HHHH--HHHHHHhcCCCEEEEccccchhHHHHHHHH------cCCCCEEEEecCcchhhc
Confidence 33221100 00000000 0000 122345678999999986665555444321 246678888888532110
Q ss_pred CCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 439 GPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 439 ~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.. .... .. ...+++..++.+|.++++|+.+.+.+... ++ . .+..++.+++||
T Consensus 120 ~~-----------~~~~--~~-------~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~------~-~~~~~~~~~~~~ 171 (359)
T cd03808 120 SG-----------GLKR--RL-------YLLLERLALRFTDKVIFQNEDDRDLALKL-GI------I-KKKKTVLIPGSG 171 (359)
T ss_pred cc-----------hhHH--HH-------HHHHHHHHHhhccEEEEcCHHHHHHHHHh-cC------C-CcCceEEecCCC
Confidence 00 0000 00 12356677889999999999998887652 11 0 024678889999
Q ss_pred CcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--C
Q 007130 519 IDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--Q 596 (617)
Q Consensus 519 ID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~ 596 (617)
+|...|.+... . . ..+.++|+|+||+.++||++.+++|+..+.+ .
T Consensus 172 ~~~~~~~~~~~---------------------------~----~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~ 218 (359)
T cd03808 172 VDLDRFSPSPE---------------------------P----I--PEDDPVFLFVARLLKDKGIDELLEAARILKAKGP 218 (359)
T ss_pred CChhhcCcccc---------------------------c----c--CCCCcEEEEEeccccccCHHHHHHHHHHHHhcCC
Confidence 99887754210 0 0 1356899999999999999999999999874 4
Q ss_pred CcEEEEEecChh
Q 007130 597 DVQLSHVGHWQT 608 (617)
Q Consensus 597 dv~LVIvG~G~~ 608 (617)
+++|+|+|.|..
T Consensus 219 ~~~l~i~G~~~~ 230 (359)
T cd03808 219 NVRLLLVGDGDE 230 (359)
T ss_pred CeEEEEEcCCCc
Confidence 899999999974
No 59
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.55 E-value=6.3e-14 Score=149.47 Aligned_cols=218 Identities=15% Similarity=0.046 Sum_probs=134.9
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcE
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVD 356 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~ 356 (617)
+|||++++. ..||...++.+|+++|.++||+|+|++......... ....|++
T Consensus 1 ~~~i~i~~~------g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~----------------------~~~~g~~ 52 (357)
T PRK00726 1 MKKILLAGG------GTGGHVFPALALAEELKKRGWEVLYLGTARGMEARL----------------------VPKAGIE 52 (357)
T ss_pred CcEEEEEcC------cchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhc----------------------cccCCCc
Confidence 499999986 368999999999999999999999998754211100 0012455
Q ss_pred EEEecCccccccCCCcCCC---CCCccccc-cccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeC
Q 007130 357 FVFLDSPLFRHLGNNIYGG---GREIPWYV-PCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHN 432 (617)
Q Consensus 357 v~~i~~p~~~~~~~~iy~~---~~~~~~~l-~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~ 432 (617)
++.++.+.+.. ...... .....+.+ ...++++..+|||||+|.|..++.+.++.. ..++|+|++.|+
T Consensus 53 ~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~-------~~~~p~v~~~~~ 123 (357)
T PRK00726 53 FHFIPSGGLRR--KGSLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAAR-------LLGIPLVIHEQN 123 (357)
T ss_pred EEEEeccCcCC--CChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHH-------HcCCCEEEEcCC
Confidence 55544321100 000000 00000000 012345667899999999876665544332 257899987665
Q ss_pred CcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcE
Q 007130 433 IAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKL 512 (617)
Q Consensus 433 ~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI 512 (617)
. ++. ...++.++.+|.++++++... .. .+..++
T Consensus 124 ~-----~~~---------------------------~~~r~~~~~~d~ii~~~~~~~---~~------------~~~~~i 156 (357)
T PRK00726 124 A-----VPG---------------------------LANKLLARFAKKVATAFPGAF---PE------------FFKPKA 156 (357)
T ss_pred C-----Ccc---------------------------HHHHHHHHHhchheECchhhh---hc------------cCCCCE
Confidence 2 110 123455678999999987432 10 146899
Q ss_pred EEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHH-HHHH
Q 007130 513 SGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIA-EAIP 591 (617)
Q Consensus 513 ~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLI-eA~~ 591 (617)
.+|+||||.+.|.+.. .+.+++++ ++.++|+++|+..++|++..++ +|+.
T Consensus 157 ~vi~n~v~~~~~~~~~---------------------------~~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a~~ 207 (357)
T PRK00726 157 VVTGNPVREEILALAA---------------------------PPARLAGR--EGKPTLLVVGGSQGARVLNEAVPEALA 207 (357)
T ss_pred EEECCCCChHhhcccc---------------------------hhhhccCC--CCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 9999999987664310 12234554 3567899999999999876555 8988
Q ss_pred hccCCCcEEEEEecCh
Q 007130 592 WMMGQDVQLSHVGHWQ 607 (617)
Q Consensus 592 ~L~~~dv~LVIvG~G~ 607 (617)
.+......++++|+|+
T Consensus 208 ~~~~~~~~~~~~G~g~ 223 (357)
T PRK00726 208 LLPEALQVIHQTGKGD 223 (357)
T ss_pred HhhhCcEEEEEcCCCc
Confidence 8754335678889997
No 60
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.53 E-value=3.8e-14 Score=131.02 Aligned_cols=158 Identities=23% Similarity=0.191 Sum_probs=86.0
Q ss_pred CcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEEecCccccccCCCcC
Q 007130 294 GGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIY 373 (617)
Q Consensus 294 GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~~p~~~~~~~~iy 373 (617)
||+++++.+|+++|+++||+|+|+++........ ....++.++.+..+.... .+
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~----~~ 54 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPW----PL 54 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSS----GG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccch----hh
Confidence 8999999999999999999999999876543210 123456666554332110 00
Q ss_pred CCCCCccccccccccc--cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCc
Q 007130 374 GGGREIPWYVPCGGVC--YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPG 451 (617)
Q Consensus 374 ~~~~~~~~~l~~~~v~--~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~ 451 (617)
... ...+.+ ..++ ...+|||||+|++..++++.+++. ..++|+|+|+|+..+... .
T Consensus 55 ~~~-~~~~~~--~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~-------~~~~p~v~~~h~~~~~~~---~--------- 112 (160)
T PF13579_consen 55 RLL-RFLRRL--RRLLAARRERPDVVHAHSPTAGLVAALARR-------RRGIPLVVTVHGTLFRRG---S--------- 112 (160)
T ss_dssp GHC-CHHHHH--HHHCHHCT---SEEEEEHHHHHHHHHHHHH-------HHT--EEEE-SS-T-----------------
T ss_pred hhH-HHHHHH--HHHHhhhccCCeEEEecccchhHHHHHHHH-------ccCCcEEEEECCCchhhc---c---------
Confidence 000 011111 2344 677999999999776666655542 147999999998432100 0
Q ss_pred cccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 452 HYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 452 ~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
.+.. .+ ...+++..++.||+|+++|+.+++.+.+ +|+ +..++.|||||
T Consensus 113 ~~~~--~~-------~~~~~~~~~~~ad~vi~~S~~~~~~l~~--~g~--------~~~ri~vipnG 160 (160)
T PF13579_consen 113 RWKR--RL-------YRWLERRLLRRADRVIVVSEAMRRYLRR--YGV--------PPDRIHVIPNG 160 (160)
T ss_dssp -HHH--HH-------HHHHHHHHHHH-SEEEESSHHHHHHHHH--H-----------GGGEEE----
T ss_pred chhh--HH-------HHHHHHHHHhcCCEEEECCHHHHHHHHH--hCC--------CCCcEEEeCcC
Confidence 0000 00 1235778899999999999999999886 332 67899999998
No 61
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.51 E-value=1e-13 Score=152.21 Aligned_cols=247 Identities=14% Similarity=0.040 Sum_probs=138.4
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCC-CcceeEeeccccceEEEEEeeeCCcEEEEec-C
Q 007130 288 GPWSKTG-GLGDVAGALPKALARR--GHRVMVVAPHYGNYAEPQDT-GIRKRYRVDRQDIEVAYFQAYIDGVDFVFLD-S 362 (617)
Q Consensus 288 ~P~~~~G-Glg~~v~~LakaLa~~--GheV~Vv~p~y~~~~~~~~~-~~~~~~~~~g~~~~~~v~~~~~~gV~v~~i~-~ 362 (617)
.|+...| |.++++.+.+.+|.++ ||+|+|+|..+...... .+ ....++. ....+++.++++. .
T Consensus 7 hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~-~l~~~~~~f~-----------~~~~~~~~~~~~~~~ 74 (419)
T cd03806 7 HPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEE-ILEKVESRFN-----------IELDRPRIVFFLLKY 74 (419)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHH-HHHHHHHhcC-----------eecCCCceEEEEecc
Confidence 3555666 9999999999999998 89999998775432100 00 0000110 1123455544431 1
Q ss_pred ccccccCCCcCCCCC---Ccccccc-ccccccCCCCcEEEEcC-cchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 363 PLFRHLGNNIYGGGR---EIPWYVP-CGGVCYGDGNLVFIAND-WHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 363 p~~~~~~~~iy~~~~---~~~~~l~-~~~v~~~~~pDIIHaHd-~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
..+. +.+.|+... +....+. +...+.+.+||||..|. |..++ ++ ... +.++|+|+-+|-..
T Consensus 75 ~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~-~~--~~~------~~~~~~i~y~h~P~--- 140 (419)
T cd03806 75 RKLV--EASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTY-PL--VRL------LGGCPVGAYVHYPT--- 140 (419)
T ss_pred eeee--ccccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHH-HH--HHH------hcCCeEEEEecCCc---
Confidence 0111 112232211 0000000 00112245799988885 43322 22 221 24779999999310
Q ss_pred CCCCCcccc--cCC---------Ccccc-ccccc-cCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccc
Q 007130 438 RGPVSDFVY--TDL---------PGHYL-DLFKL-YDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNI 504 (617)
Q Consensus 438 ~~p~~~~~~--~gl---------p~~~~-~~l~~-~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~ 504 (617)
.+.+.+.. .+. ....+ ..+++ |- .-...++++.++.||.|+++|++.++.+... ++
T Consensus 141 -~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~---~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~-~~------ 209 (419)
T cd03806 141 -ISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYY---RLFAFLYGLAGSFADVVMVNSTWTRNHIRSL-WK------ 209 (419)
T ss_pred -chHHHHHHHhhccccccCccchhccchHHHHHHHHH---HHHHHHHHHHhhcCCEEEECCHHHHHHHHHH-hC------
Confidence 00011100 000 00000 00000 00 0011366778899999999999998887652 21
Q ss_pred cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHH
Q 007130 505 INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVD 584 (617)
Q Consensus 505 l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvd 584 (617)
...++.+|+||+|++.|.+... .. ..+.++|+|+||+.++||++
T Consensus 210 ---~~~~~~vi~~gvd~~~~~~~~~-------------------------------~~--~~~~~~il~vgr~~~~K~~~ 253 (419)
T cd03806 210 ---RNTKPSIVYPPCDVEELLKLPL-------------------------------DE--KTRENQILSIAQFRPEKNHP 253 (419)
T ss_pred ---cCCCcEEEcCCCCHHHhccccc-------------------------------cc--ccCCcEEEEEEeecCCCCHH
Confidence 1248999999999887754210 00 12457999999999999999
Q ss_pred HHHHHHHhccCC-------CcEEEEEecCh
Q 007130 585 LIAEAIPWMMGQ-------DVQLSHVGHWQ 607 (617)
Q Consensus 585 lLIeA~~~L~~~-------dv~LVIvG~G~ 607 (617)
++++|++.+.+. +++|+|+|+|.
T Consensus 254 ~li~A~~~l~~~~~~~~~~~~~lvivG~~~ 283 (419)
T cd03806 254 LQLRAFAKLLKRLPEEIKEKIKLVLIGSCR 283 (419)
T ss_pred HHHHHHHHHHHhCcccccCceEEEEEcCCC
Confidence 999999988752 59999999974
No 62
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.50 E-value=1.3e-13 Score=155.25 Aligned_cols=260 Identities=14% Similarity=0.115 Sum_probs=136.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCc-ceeEeeccccce--EEEEE----
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR-GHRVMVVAPHYGNYAEPQDTGI-RKRYRVDRQDIE--VAYFQ---- 349 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~-GheV~Vv~p~y~~~~~~~~~~~-~~~~~~~g~~~~--~~v~~---- 349 (617)
-+|++||....|| .-|.++--.--|-.|++. |++|++|.|.-.. .++..+.. ...+..+. +++ ++-|-
T Consensus 323 r~~~ivTtAslPW--mTGtavnpL~rAayLa~~~~~~VtlviPWl~~-~dq~~vy~~~~~F~~p~-eQe~~ir~wl~~r~ 398 (794)
T PLN02501 323 RHVAIVTTASLPW--MTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCK-SDQELVYPNNLTFSSPE-EQESYIRNWLEERI 398 (794)
T ss_pred CeEEEEEcccCcc--cccccccHHHHHHHhcccCCceEEEEEecCCc-cccccccCCCcccCCHH-HHHHHHHHHHHHhc
Confidence 7999999999999 555665556667788887 6999999986432 11111100 00111000 000 00000
Q ss_pred eeeCCcEEEEecCccccccCCCcCCCCCCcccccc-ccccccCCCCcEEEEcCcc-hhHH--HHHHHHHhhhccCCCCce
Q 007130 350 AYIDGVDFVFLDSPLFRHLGNNIYGGGREIPWYVP-CGGVCYGDGNLVFIANDWH-TALL--PVYLKAYYRDNGLMQYTR 425 (617)
Q Consensus 350 ~~~~gV~v~~i~~p~~~~~~~~iy~~~~~~~~~l~-~~~v~~~~~pDIIHaHd~~-tal~--~~~l~~~~~~~~~~~~iP 425 (617)
....++.+.|++. -|.....-.+.+. ..+.+..++|||||++... .++. +..+. + ..+ |
T Consensus 399 g~~~~~~i~fYpg---------~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~A---r----Kl~-P 461 (794)
T PLN02501 399 GFKADFKISFYPG---------KFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWT---D----KFN-H 461 (794)
T ss_pred CCCCCceEEeecc---------hhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHH---H----HcC-C
Confidence 0111222222111 1111110001000 0123456789999999753 3333 22222 1 134 8
Q ss_pred EEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCcccccc
Q 007130 426 SLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNII 505 (617)
Q Consensus 426 vV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l 505 (617)
+|.++|+- |... +...++. .+..+-+. -...++++++ ||+|+++|..+. ++.
T Consensus 462 VVasyHTn-y~eY-----l~~y~~g--~L~~~llk-----~l~~~v~r~h--cD~VIaPS~atq-~L~------------ 513 (794)
T PLN02501 462 VVGVVHTN-YLEY-----IKREKNG--ALQAFFVK-----HINNWVTRAY--CHKVLRLSAATQ-DLP------------ 513 (794)
T ss_pred eEEEEeCC-cHHH-----HhHhcch--hHHHHHHH-----HHHHHHHHhh--CCEEEcCCHHHH-Hhc------------
Confidence 99999983 2110 1101110 00000000 0011222222 899999996654 321
Q ss_pred ccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHH
Q 007130 506 NEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDL 585 (617)
Q Consensus 506 ~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdl 585 (617)
. .+....||||++.|.|... ...++++|++. ..+.++|+|||.++||++.
T Consensus 514 ---~-~vI~nVnGVDte~F~P~~r------------------------~~~~r~lgi~~--~~kgiLfVGRLa~EKGld~ 563 (794)
T PLN02501 514 ---K-SVICNVHGVNPKFLKIGEK------------------------VAEERELGQQA--FSKGAYFLGKMVWAKGYRE 563 (794)
T ss_pred ---c-cceeecccccccccCCcch------------------------hHHHHhcCCcc--ccCceEEEEcccccCCHHH
Confidence 1 1122237999999987421 11224567642 2345899999999999999
Q ss_pred HHHHHHhccC--CCcEEEEEecChh--hhHHHHHh
Q 007130 586 IAEAIPWMMG--QDVQLSHVGHWQT--RFGRDAEE 616 (617)
Q Consensus 586 LIeA~~~L~~--~dv~LVIvG~G~~--~~e~~l~~ 616 (617)
||+|++.+.. .+++|+|+|+|+. .+++++++
T Consensus 564 LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~e 598 (794)
T PLN02501 564 LIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKR 598 (794)
T ss_pred HHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHH
Confidence 9999998765 3899999999983 56666554
No 63
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.49 E-value=2.2e-14 Score=134.95 Aligned_cols=175 Identities=23% Similarity=0.223 Sum_probs=89.8
Q ss_pred EEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEE
Q 007130 280 VILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVF 359 (617)
Q Consensus 280 IL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~ 359 (617)
|+++. .+.| ..||+++++.+|+++|+++||+|+|+++......... .. .....
T Consensus 1 ili~~-~~~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~------~~------------------~~~~~ 53 (177)
T PF13439_consen 1 ILITN-IFLP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE------LV------------------KIFVK 53 (177)
T ss_dssp -EEEC-C-TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST------EE------------------EE---
T ss_pred CEEEE-ecCC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh------cc------------------ceeee
Confidence 34444 4556 4899999999999999999999999998765432110 00 00000
Q ss_pred ecCccccccCCCcCCCCCCcccccc-ccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCccc-C
Q 007130 360 LDSPLFRHLGNNIYGGGREIPWYVP-CGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQ-G 437 (617)
Q Consensus 360 i~~p~~~~~~~~iy~~~~~~~~~l~-~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~q-g 437 (617)
...+ .. .... ...+... ...++...+|||||+|.+....++.... .++|+|+|+|+.... .
T Consensus 54 ~~~~-~~---~~~~----~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~---------~~~~~v~~~H~~~~~~~ 116 (177)
T PF13439_consen 54 IPYP-IR---KRFL----RSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLAC---------RKVPIVYTIHGPYFERR 116 (177)
T ss_dssp TT-S-ST---SS------HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHH---------HCSCEEEEE-HHH--HH
T ss_pred eecc-cc---cccc----hhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhc---------cCCCEEEEeCCCccccc
Confidence 0000 00 0000 0000000 1223455689999999876554443321 168999999995321 0
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
... ........+. ..+++...+.+|.|||||+.+++++.+ +| .++.++.||||
T Consensus 117 ~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~ii~vS~~~~~~l~~--~~--------~~~~ki~vI~n 169 (177)
T PF13439_consen 117 FLK--------SKLSPYSYLN---------FRIERKLYKKADRIIAVSESTKDELIK--FG--------IPPEKIHVIYN 169 (177)
T ss_dssp TTT--------TSCCCHHHHH---------HCTTHHHHCCSSEEEESSHHHHHHHHH--HT----------SS-EEE---
T ss_pred ccc--------cccchhhhhh---------hhhhhhHHhcCCEEEEECHHHHHHHHH--hC--------CcccCCEEEEC
Confidence 000 0000000010 112344578899999999999999885 33 25789999999
Q ss_pred CCcCCCCC
Q 007130 518 GIDTKEWS 525 (617)
Q Consensus 518 GID~~~f~ 525 (617)
|||++.|.
T Consensus 170 gid~~~F~ 177 (177)
T PF13439_consen 170 GIDTDRFR 177 (177)
T ss_dssp -B-CCCH-
T ss_pred CccHHHcC
Confidence 99998873
No 64
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.49 E-value=1e-13 Score=150.37 Aligned_cols=256 Identities=16% Similarity=0.158 Sum_probs=139.0
Q ss_pred EEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEEE
Q 007130 280 VILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVF 359 (617)
Q Consensus 280 IL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~~ 359 (617)
||++++.+ ||.-.+|-...+++|+++|++. |+|++++............+++. ..+.+.++.
T Consensus 1 iL~~~~~~-P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~----------------~~~~~~~~~ 62 (397)
T TIGR03087 1 ILYLVHRI-PYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRP----------------LCEEVCVVP 62 (397)
T ss_pred CeeecCCC-CCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHH----------------HhheeEEee
Confidence 67888754 5554566699999999999876 89999987532211000000000 011111111
Q ss_pred ecCc-c-ccccCCCcCCCCC-Cccc--c--c--cccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEE
Q 007130 360 LDSP-L-FRHLGNNIYGGGR-EIPW--Y--V--PCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVI 430 (617)
Q Consensus 360 i~~p-~-~~~~~~~iy~~~~-~~~~--~--l--~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~Ti 430 (617)
++.. . .... ........ ...+ . + ....++...++|+||++.... +.++.. ...++|+|+++
T Consensus 63 ~~~~~~~~~~~-~~l~~~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~---~~~~~~------~~~~~p~i~~~ 132 (397)
T TIGR03087 63 LDPRVARLRSL-LGLLTGEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAM---AQYVTP------HVRGVPRIVDF 132 (397)
T ss_pred cCcHHHHHHHH-hhhcCCCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEecccc---ceeccc------cccCCCeEeeh
Confidence 1100 0 0000 00000000 0000 0 0 011234557899999986432 222211 02578999999
Q ss_pred eCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCC
Q 007130 431 HNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDW 510 (617)
Q Consensus 431 H~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~ 510 (617)
|++.... |+.. ......+..++ +.+.. .....+++..++.+|.|+++|+..++.+.+. ++ ....
T Consensus 133 ~d~~~~~-~~~~-~~~~~~~~~~~--~~~~~---~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~-~~--------~~~~ 196 (397)
T TIGR03087 133 VDVDSDK-WLQY-ARTKRWPLRWI--YRREG---RLLLAYERAIAARFDAATFVSRAEAELFRRL-AP--------EAAG 196 (397)
T ss_pred hhHHHHH-HHHH-HhccCcchhHH--HHHHH---HHHHHHHHHHHhhCCeEEEcCHHHHHHHHHh-CC--------CCCC
Confidence 9863210 1000 00000110000 00000 0012467788899999999999988887642 11 1356
Q ss_pred cEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHH---
Q 007130 511 KLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIA--- 587 (617)
Q Consensus 511 kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLI--- 587 (617)
++.+||||||.+.|.|.... .. .++ .+.++|+|+||+.++||++.++
T Consensus 197 ~v~vipngvd~~~f~~~~~~--------------------------~~--~~~--~~~~~ilf~G~l~~~k~~~~l~~~~ 246 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDY--------------------------PN--PYP--PGKRVLVFTGAMDYWPNIDAVVWFA 246 (397)
T ss_pred CeEEeecccchhhcCCCccc--------------------------cC--CCC--CCCcEEEEEEecCCccCHHHHHHHH
Confidence 89999999999988763210 00 011 2457899999999999999988
Q ss_pred -HHHHhccC--CCcEEEEEecChhh
Q 007130 588 -EAIPWMMG--QDVQLSHVGHWQTR 609 (617)
Q Consensus 588 -eA~~~L~~--~dv~LVIvG~G~~~ 609 (617)
++++.+.+ .+++|+|+|+|+..
T Consensus 247 ~~~~~~l~~~~p~~~l~ivG~g~~~ 271 (397)
T TIGR03087 247 ERVFPAVRARRPAAEFYIVGAKPSP 271 (397)
T ss_pred HHHHHHHHHHCCCcEEEEECCCChH
Confidence 45555543 48999999999753
No 65
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.48 E-value=5.2e-13 Score=148.72 Aligned_cols=163 Identities=11% Similarity=0.012 Sum_probs=105.5
Q ss_pred ccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEE-EEeCCcccCCCCCCcccccCCCccccccccccCCCCc
Q 007130 387 GVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLL-VIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGG 465 (617)
Q Consensus 387 ~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~-TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g 465 (617)
.+++..+|||||+|+..+.+++.++.. +.++|+++ +.|+. + +... ..
T Consensus 274 ~~ir~~rpDIVHt~~~~a~l~g~laA~-------lagvpviv~~~h~~-~----~~~~-------~r------------- 321 (578)
T PRK15490 274 PHLCERKLDYLSVWQDGACLMIALAAL-------IAGVPRIQLGLRGL-P----PVVR-------KR------------- 321 (578)
T ss_pred HHHHHcCCCEEEEcCcccHHHHHHHHH-------hcCCCEEEEeeccc-C----Ccch-------hh-------------
Confidence 356788999999999776566555443 35788865 46652 1 1100 00
Q ss_pred hhHHHHHHH-------HhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCC
Q 007130 466 EHFNIFAAG-------LKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYT 538 (617)
Q Consensus 466 ~~~~l~k~~-------l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~ 538 (617)
....+... +..+| ++++|....+++.+. ++ .+..++.+||||||++.|.|..+.
T Consensus 322 -~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~-lg--------ip~~KI~VIyNGVD~~rf~p~~~~-------- 382 (578)
T PRK15490 322 -LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADW-LK--------LEAKHFQVVYNGVLPPSTEPSSEV-------- 382 (578)
T ss_pred -HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHH-hC--------CCHHHEEEEeCCcchhhcCccchh--------
Confidence 00111111 23344 677887777776542 22 278899999999999988774210
Q ss_pred ccccccccCCchHHHHHHHH--HhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh--hhHH
Q 007130 539 NYCLDTLHTGKPQCKAALQR--EFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT--RFGR 612 (617)
Q Consensus 539 ~~~~e~~~~~k~~~K~~Lr~--~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~--~~e~ 612 (617)
+ ...+. ..+++ ++.++|+++||+.++||++.+++|+..+.+ .+++|+|+|+|+. .+++
T Consensus 383 -----------~---~~~r~~~~~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~ 446 (578)
T PRK15490 383 -----------P---HKIWQQFTQKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQK 446 (578)
T ss_pred -----------h---HHHHHHhhhccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHH
Confidence 0 01222 23343 356799999999999999999999988765 4899999999973 5655
Q ss_pred HHHh
Q 007130 613 DAEE 616 (617)
Q Consensus 613 ~l~~ 616 (617)
++++
T Consensus 447 la~e 450 (578)
T PRK15490 447 RAEQ 450 (578)
T ss_pred HHHH
Confidence 5554
No 66
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.44 E-value=8.5e-13 Score=139.72 Aligned_cols=224 Identities=15% Similarity=0.050 Sum_probs=133.9
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
+|++.+. ..||-..++..|+++|.++||+|+|++......... . ...|++++
T Consensus 1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~--~--------------------~~~~~~~~ 52 (350)
T cd03785 1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGLEARL--V--------------------PKAGIPLH 52 (350)
T ss_pred CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhc--c--------------------cccCCceE
Confidence 4666665 478899999999999999999999998764321110 0 01234444
Q ss_pred EecCccccccCCCcCCCCC---Cccccc-cccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCc
Q 007130 359 FLDSPLFRHLGNNIYGGGR---EIPWYV-PCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIA 434 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~---~~~~~l-~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~ 434 (617)
.+..+.+.. ...+.... ...+.+ ...++++..+|||||+|.+..++.+.++.. ..++|+|++.|+.
T Consensus 53 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~-------~~~~p~v~~~~~~- 122 (350)
T cd03785 53 TIPVGGLRR--KGSLKKLKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAK-------LLGIPLVIHEQNA- 122 (350)
T ss_pred EEEecCcCC--CChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHH-------HhCCCEEEEcCCC-
Confidence 443221110 00000000 000000 012345667899999998765544443332 2578998765542
Q ss_pred ccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEE
Q 007130 435 HQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSG 514 (617)
Q Consensus 435 ~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~v 514 (617)
++. ...+..++.+|.|+++|+...+. .+..++.+
T Consensus 123 ----~~~---------------------------~~~~~~~~~~~~vi~~s~~~~~~---------------~~~~~~~~ 156 (350)
T cd03785 123 ----VPG---------------------------LANRLLARFADRVALSFPETAKY---------------FPKDKAVV 156 (350)
T ss_pred ----Ccc---------------------------HHHHHHHHhhCEEEEcchhhhhc---------------CCCCcEEE
Confidence 110 01234556799999999876533 03578999
Q ss_pred EecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHH-HHHHHHHhc
Q 007130 515 IVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVD-LIAEAIPWM 593 (617)
Q Consensus 515 IpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvd-lLIeA~~~L 593 (617)
|+||+|.+.|.+. . .+++++++ ++.++|+++|+....|+.+ ++++|++.+
T Consensus 157 i~n~v~~~~~~~~--------------------------~-~~~~~~~~--~~~~~i~~~~g~~~~~~~~~~l~~a~~~l 207 (350)
T cd03785 157 TGNPVREEILALD--------------------------R-ERARLGLR--PGKPTLLVFGGSQGARAINEAVPEALAEL 207 (350)
T ss_pred ECCCCchHHhhhh--------------------------h-hHHhcCCC--CCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 9999998766431 0 15566765 4667888998888888875 456888887
Q ss_pred cCCCcE-EEEEecCh-hhhHHHHH
Q 007130 594 MGQDVQ-LSHVGHWQ-TRFGRDAE 615 (617)
Q Consensus 594 ~~~dv~-LVIvG~G~-~~~e~~l~ 615 (617)
.+.+++ ++++|.|. .++.+.++
T Consensus 208 ~~~~~~~~~i~G~g~~~~l~~~~~ 231 (350)
T cd03785 208 LRKRLQVIHQTGKGDLEEVKKAYE 231 (350)
T ss_pred hccCeEEEEEcCCccHHHHHHHHh
Confidence 655666 45788884 23444443
No 67
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.43 E-value=3.1e-13 Score=150.60 Aligned_cols=167 Identities=22% Similarity=0.233 Sum_probs=105.7
Q ss_pred CCCcEEEEcCcc-hhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHH
Q 007130 392 DGNLVFIANDWH-TALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNI 470 (617)
Q Consensus 392 ~~pDIIHaHd~~-tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l 470 (617)
.++||||+|... +++++.+++. ..++|+|+|.|++....+ ..++....+....+.. .|.. -...+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~-------~~~~p~I~t~Hg~~~~e~--~~~~~~~~~~~~~~~~-~~~~----~~~~l 237 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKA-------RRGTPFLLTEHGIYTRER--KIELLQADWEMSYFRR-LWIR----FFESL 237 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHH-------HhCCCEEEecCCccHHHH--HHHHHhcccchHHHHH-HHHH----HHHHH
Confidence 378999999743 3344444333 268999999999521100 0000000000000000 0000 01235
Q ss_pred HHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCch
Q 007130 471 FAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKP 550 (617)
Q Consensus 471 ~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~ 550 (617)
.+.+++.||.|+++|+..++.+.. .| .+..++.+||||||.+.|.|....
T Consensus 238 ~~~~~~~ad~Ii~~s~~~~~~~~~--~g--------~~~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 238 GRLAYQAADRITTLYEGNRERQIE--DG--------ADPEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred HHHHHHhCCEEEecCHHHHHHHHH--cC--------CCHHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 567889999999999987765542 23 256799999999999888653110
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecCh--hhhHHHH
Q 007130 551 QCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQ--TRFGRDA 614 (617)
Q Consensus 551 ~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~--~~~e~~l 614 (617)
.. ..+.++|+|+||+.+.||++.|++|++.+.+ .+++|+|+|.|+ +.+.+.+
T Consensus 288 ----------~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~ 343 (475)
T cd03813 288 ----------RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEEC 343 (475)
T ss_pred ----------cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHH
Confidence 01 1356899999999999999999999998875 489999999984 3444433
No 68
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.42 E-value=3e-12 Score=135.47 Aligned_cols=224 Identities=17% Similarity=0.093 Sum_probs=125.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
|||++++.+ .||--..+..|+++|.++||+|+|++..++.... . ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~---~-------------------~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR---L-------------------VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc---c-------------------cccCCCce
Confidence 799988754 3444445569999999999999999864321100 0 00124444
Q ss_pred EEecCccccccC-CCcCCCCCCccccc-cccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcc
Q 007130 358 VFLDSPLFRHLG-NNIYGGGREIPWYV-PCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 435 (617)
Q Consensus 358 ~~i~~p~~~~~~-~~iy~~~~~~~~~l-~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~ 435 (617)
+.++...+.... ...+.........+ ...++++..+|||||+|.+...+.+..+.. ..++|+|++.|+.
T Consensus 53 ~~i~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~-------~~~~p~v~~~~~~-- 123 (348)
T TIGR01133 53 YFIPVGGLRRKGSFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAK-------LLGIPLFHHEQNA-- 123 (348)
T ss_pred EEEeccCcCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHH-------HcCCCEEEECCCC--
Confidence 444321111000 00000000000000 012345677899999998765554443332 2567887543321
Q ss_pred cCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEE
Q 007130 436 QGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGI 515 (617)
Q Consensus 436 qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vI 515 (617)
.+. ...++.++.+|.++++|+.+.+.+ +..+|
T Consensus 124 ---~~~---------------------------~~~~~~~~~~d~ii~~~~~~~~~~------------------~~~~i 155 (348)
T TIGR01133 124 ---VPG---------------------------LTNKLLSRFAKKVLISFPGAKDHF------------------EAVLV 155 (348)
T ss_pred ---Ccc---------------------------HHHHHHHHHhCeeEECchhHhhcC------------------CceEE
Confidence 000 123456678999999998664321 23799
Q ss_pred ecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHH-HHHHHHhcc
Q 007130 516 VNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDL-IAEAIPWMM 594 (617)
Q Consensus 516 pNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdl-LIeA~~~L~ 594 (617)
+||||...+.+.. .+++++++ ++.++|+++||...+|++.. +++|++.+.
T Consensus 156 ~n~v~~~~~~~~~---------------------------~~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~ 206 (348)
T TIGR01133 156 GNPVRQEIRSLPV---------------------------PRERFGLR--EGKPTILVLGGSQGAKILNELVPKALAKLA 206 (348)
T ss_pred cCCcCHHHhcccc---------------------------hhhhcCCC--CCCeEEEEECCchhHHHHHHHHHHHHHHHh
Confidence 9999976553310 12345665 46789999999988999754 568988876
Q ss_pred CCCcEEE-EEecCh-hhhHHHHH
Q 007130 595 GQDVQLS-HVGHWQ-TRFGRDAE 615 (617)
Q Consensus 595 ~~dv~LV-IvG~G~-~~~e~~l~ 615 (617)
+.+++++ ++|+|+ ..+++.++
T Consensus 207 ~~~~~~~~~~g~~~~~~l~~~~~ 229 (348)
T TIGR01133 207 EKGIQIVHQTGKNDLEKVKNVYQ 229 (348)
T ss_pred hcCcEEEEECCcchHHHHHHHHh
Confidence 5566664 455554 23444443
No 69
>PLN02949 transferase, transferring glycosyl groups
Probab=99.30 E-value=5.1e-11 Score=132.48 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=71.2
Q ss_pred HHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCc
Q 007130 470 IFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGK 549 (617)
Q Consensus 470 l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k 549 (617)
++..+.+.||.|+++|+.+++.+.+. ++ ...++.+|+||+|+..|....
T Consensus 213 l~~~~~~~ad~ii~nS~~t~~~l~~~-~~---------~~~~i~vvyp~vd~~~~~~~~--------------------- 261 (463)
T PLN02949 213 MYGLVGRCAHLAMVNSSWTKSHIEAL-WR---------IPERIKRVYPPCDTSGLQALP--------------------- 261 (463)
T ss_pred HHHHHcCCCCEEEECCHHHHHHHHHH-cC---------CCCCeEEEcCCCCHHHcccCC---------------------
Confidence 44556689999999999999888642 22 135789999999986653210
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC------CCcEEEEEecCh
Q 007130 550 PQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHWQ 607 (617)
Q Consensus 550 ~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G~ 607 (617)
.....+.++|+|+||+.++||++++|+|++.+.+ .+++|+|+|+|+
T Consensus 262 ------------~~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~ 313 (463)
T PLN02949 262 ------------LERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCR 313 (463)
T ss_pred ------------ccccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCC
Confidence 0001245789999999999999999999998653 379999999974
No 70
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.29 E-value=2.9e-11 Score=128.17 Aligned_cols=87 Identities=21% Similarity=0.148 Sum_probs=70.1
Q ss_pred HHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCc
Q 007130 470 IFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGK 549 (617)
Q Consensus 470 l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k 549 (617)
+++..++.+|.|+++|+.+++.+.+. + ..+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~-~-----------~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY-Y-----------GRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH-h-----------CCCcEEECCCCCHhhcCcCC---------------------
Confidence 45667889999999999999888642 1 23568999999998775421
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCcEEEEEecChh
Q 007130 550 PQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHVGHWQT 608 (617)
Q Consensus 550 ~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv~LVIvG~G~~ 608 (617)
...++|+|+||+.++||++.|++|+..+. ++|+|+|+|+.
T Consensus 193 ----------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~~ 232 (351)
T cd03804 193 ----------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGPE 232 (351)
T ss_pred ----------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECChh
Confidence 12457999999999999999999998873 89999999974
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.19 E-value=1.5e-11 Score=136.75 Aligned_cols=165 Identities=19% Similarity=0.180 Sum_probs=100.9
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHH
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFA 472 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k 472 (617)
..|+||+||+|..++|.+++.. ....|+++.+|-. ||...+.. -+|. . ..+.
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~------~~~~~i~~f~Hip-----fP~~e~~~-~lp~---------------~-~~ll 182 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRER------GPDARIGFFLHIP-----FPSSEIFR-CLPW---------------R-EELL 182 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhh------CCCCeEEEEEeCC-----CCChHHHh-hCCC---------------h-HHHH
Confidence 4699999999999999888753 2467999999973 34332210 1111 0 1112
Q ss_pred HHHhhcCeeEEeCHHHHHHHHhhhc-CCccc------cccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccc
Q 007130 473 AGLKTADRVVTVSRGYSWELKTAEG-GWGLH------NIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTL 545 (617)
Q Consensus 473 ~~l~~AD~VIaVS~~~a~~l~~~~~-G~gL~------~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~ 545 (617)
.++..||.|..-+..++....+..- -.++. -.+.....++.+||||||.+.|.+...
T Consensus 183 ~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~---------------- 246 (460)
T cd03788 183 RGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA---------------- 246 (460)
T ss_pred HHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc----------------
Confidence 3444566666666555544332100 00000 001113457899999999998865321
Q ss_pred cCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEEEEEecC
Q 007130 546 HTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQLSHVGHW 606 (617)
Q Consensus 546 ~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~LVIvG~G 606 (617)
.+..++.+++..+.. ++.++|+++|||++.||++.+++|++.+++. +++|+++|.+
T Consensus 247 ---~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~ 308 (460)
T cd03788 247 ---SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVP 308 (460)
T ss_pred ---CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccC
Confidence 112233333334433 3678999999999999999999999988652 3678888753
No 72
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.14 E-value=2.8e-10 Score=122.71 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=126.7
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCc
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV 355 (617)
+.||||+++..+ .+|-...+..|+++|.++||+|.++++.+....+....-.+..| ..-+
T Consensus 3 ~~~rili~t~~~-----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y---------------~~~~ 62 (380)
T PRK13609 3 KNPKVLILTAHY-----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLY---------------LKSY 62 (380)
T ss_pred CCCeEEEEEcCC-----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHH---------------HHHH
Confidence 468999999863 56999999999999999999988887765422110000000000 0000
Q ss_pred EEEEecCcccccc----CCCcCCCCCCcc-cc----ccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceE
Q 007130 356 DFVFLDSPLFRHL----GNNIYGGGREIP-WY----VPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRS 426 (617)
Q Consensus 356 ~v~~i~~p~~~~~----~~~iy~~~~~~~-~~----l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPv 426 (617)
. ..|..+.+ ...++... ... +. .....++...+||+||+|.+.. .++.+ ++. ...++|+
T Consensus 63 ~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~-~~~~~-~~~-----~~~~ip~ 130 (380)
T PRK13609 63 T----IGKELYRLFYYGVEKIYDKK-IFSWYANFGRKRLKLLLQAEKPDIVINTFPII-AVPEL-KKQ-----TGISIPT 130 (380)
T ss_pred H----HhHHHHHHHHhccCcccchH-HHHHHHHHHHHHHHHHHHHhCcCEEEEcChHH-HHHHH-HHh-----cCCCCCe
Confidence 0 00000000 00000000 000 00 0012345677999999985433 23322 221 1246898
Q ss_pred EEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccc
Q 007130 427 LLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIIN 506 (617)
Q Consensus 427 V~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~ 506 (617)
+.++++.. .. -++.++.+|.++++|+.+++.+.+ .|.
T Consensus 131 ~~~~td~~-----~~-----------------------------~~~~~~~ad~i~~~s~~~~~~l~~--~gi------- 167 (380)
T PRK13609 131 YNVLTDFC-----LH-----------------------------KIWVHREVDRYFVATDHVKKVLVD--IGV------- 167 (380)
T ss_pred EEEeCCCC-----CC-----------------------------cccccCCCCEEEECCHHHHHHHHH--cCC-------
Confidence 75554420 00 012345799999999999888764 231
Q ss_pred cCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCc-EEEEEeCCccccCHHH
Q 007130 507 EVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVP-VIGFIGRLDHQKGVDL 585 (617)
Q Consensus 507 ~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~-vIlfVGRL~~qKGvdl 585 (617)
+..++.++.|.++. .|.+.. .+..+++++|++. +.+ ++++.|++...||++.
T Consensus 168 -~~~ki~v~G~p~~~-~f~~~~-----------------------~~~~~~~~~~l~~--~~~~il~~~G~~~~~k~~~~ 220 (380)
T PRK13609 168 -PPEQVVETGIPIRS-SFELKI-----------------------NPDIIYNKYQLCP--NKKILLIMAGAHGVLGNVKE 220 (380)
T ss_pred -ChhHEEEECcccCh-HHcCcC-----------------------CHHHHHHHcCCCC--CCcEEEEEcCCCCCCcCHHH
Confidence 56788877665543 232210 1134678899863 444 5556789999999999
Q ss_pred HHHHHHhccCCCcEEEEEec
Q 007130 586 IAEAIPWMMGQDVQLSHVGH 605 (617)
Q Consensus 586 LIeA~~~L~~~dv~LVIvG~ 605 (617)
+++++... .+++++++|+
T Consensus 221 li~~l~~~--~~~~~viv~G 238 (380)
T PRK13609 221 LCQSLMSV--PDLQVVVVCG 238 (380)
T ss_pred HHHHHhhC--CCcEEEEEeC
Confidence 99998643 4789887754
No 73
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.09 E-value=1.6e-10 Score=128.59 Aligned_cols=274 Identities=19% Similarity=0.256 Sum_probs=136.4
Q ss_pred EcCccCCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEecCCCCCCC-------CCCCCcceeE-eeccccceEEEEEeeeC
Q 007130 283 VAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVAPHYGNYAE-------PQDTGIRKRY-RVDRQDIEVAYFQAYID 353 (617)
Q Consensus 283 Vt~e~~P~~~~GGlg~~v~~LakaLa~-~GheV~Vv~p~y~~~~~-------~~~~~~~~~~-~~~g~~~~~~v~~~~~~ 353 (617)
+++|..- ++||+-+++..-|..+++ .|.+..+|.|....... .....+.... ........+.+-+..++
T Consensus 2 ~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~ 79 (633)
T PF05693_consen 2 VSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIP 79 (633)
T ss_dssp EETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESST
T ss_pred chhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeEC
Confidence 4556555 899999999999999976 69999999997543210 0000010000 01111234444445677
Q ss_pred CcEE-EEecCccccccCCCcCCC-------------CC---Cccccccccccc-------cCCCCcEEEEcCcchhHHHH
Q 007130 354 GVDF-VFLDSPLFRHLGNNIYGG-------------GR---EIPWYVPCGGVC-------YGDGNLVFIANDWHTALLPV 409 (617)
Q Consensus 354 gV~v-~~i~~p~~~~~~~~iy~~-------------~~---~~~~~l~~~~v~-------~~~~pDIIHaHd~~tal~~~ 409 (617)
|.+. +++|...++.....++.. .. .+.|...++.++ .....-|.|+|+|++++..+
T Consensus 80 G~P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll 159 (633)
T PF05693_consen 80 GRPIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLL 159 (633)
T ss_dssp T--EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHH
T ss_pred CcCeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHH
Confidence 8774 444544332211111110 00 001111111111 11233478999999999888
Q ss_pred HHHHHhhhccCCCCceEEEEEeCCcccCCC--CCC-cccccCCCcccccc-ccccCCCCchhHHHHHHHHhhcCeeEEeC
Q 007130 410 YLKAYYRDNGLMQYTRSLLVIHNIAHQGRG--PVS-DFVYTDLPGHYLDL-FKLYDPVGGEHFNIFAAGLKTADRVVTVS 485 (617)
Q Consensus 410 ~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~--p~~-~~~~~glp~~~~~~-l~~~d~~~g~~~~l~k~~l~~AD~VIaVS 485 (617)
+++.. ...+..|||.|.+- .|++ ... ++ +-.|+..-.+. ...++ .. ....+++.++..||++.|||
T Consensus 160 ~lr~~------~~~VaTvFTTHAT~-lGR~l~~~~~~~-Y~~L~~~~~d~eA~~~~-i~-~k~~iEraaA~~AdvFTTVS 229 (633)
T PF05693_consen 160 YLRKR------KPDVATVFTTHATL-LGRYLAANNKDF-YNNLDKFNGDQEAGERN-IY-HKHSIERAAAHYADVFTTVS 229 (633)
T ss_dssp HHHHT------T-SCEEEEEESS-H-HHHHHTTTSS-T-TTSGTTS-HHHHHHHTT--H-HHHHHHHHHHHHSSEEEESS
T ss_pred HHhcc------CCCeeEEEEecccc-hhhHhhcCCCcH-HHHhhccCccccccCcc-ch-HHHHHHHHHHHhcCeeeehh
Confidence 87752 35788999999852 2221 110 00 00111100000 00000 00 13568999999999999999
Q ss_pred HHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHHHH----Hh-
Q 007130 486 RGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQR----EF- 560 (617)
Q Consensus 486 ~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~----~l- 560 (617)
+.++.+... +|. ..+=.|+|||+|.+.|.... +++.-+..+|+.+.+ .+
T Consensus 230 eITa~Ea~~---------LL~--r~pDvV~pNGl~v~~~~~~~---------------efqnl~~~~k~ki~~fv~~~f~ 283 (633)
T PF05693_consen 230 EITAKEAEH---------LLK--RKPDVVTPNGLNVDKFPALH---------------EFQNLHAKAKEKIHEFVRGHFY 283 (633)
T ss_dssp HHHHHHHHH---------HHS--S--SEE----B-GGGTSSTT---------------HHHHHHHHHHHHHHHHHHHHST
T ss_pred hhHHHHHHH---------HhC--CCCCEEcCCCccccccccch---------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 999988764 222 22237899999998774321 111112344544432 22
Q ss_pred C-CCCC-CCCcEEEEEeCCc-cccCHHHHHHHHHhcc
Q 007130 561 G-LPVR-DDVPVIGFIGRLD-HQKGVDLIAEAIPWMM 594 (617)
Q Consensus 561 G-l~~~-~d~~vIlfVGRL~-~qKGvdlLIeA~~~L~ 594 (617)
| +..+ ++..+|...||.+ ..||+|.+|+|+++|-
T Consensus 284 g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn 320 (633)
T PF05693_consen 284 GHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLN 320 (633)
T ss_dssp T---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHH
T ss_pred ccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHH
Confidence 2 2212 2455677799999 5999999999999874
No 74
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.06 E-value=1.5e-09 Score=121.82 Aligned_cols=159 Identities=13% Similarity=0.034 Sum_probs=98.5
Q ss_pred CCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHH
Q 007130 391 GDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNI 470 (617)
Q Consensus 391 ~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l 470 (617)
..++||||++.......+ ++.. ...+|+|+++|+-.+. .+.. +........+ +..
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~-------~~~~~~v~~lH~~h~~--~~~~-------~~~~~~~~~~--------y~~ 263 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLEN-------KGPAKLGVVVHAEHFS--ESAT-------NETYILWNNY--------YEY 263 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhc-------CCCceEEEEEChhhhc--CccC-------cchhHHHHHH--------HHH
Confidence 457899999864432222 2221 2578999999983221 1100 0000000000 111
Q ss_pred HHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCch
Q 007130 471 FAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKP 550 (617)
Q Consensus 471 ~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~ 550 (617)
....++.+|.||++|+..++.+... ++. ......++.+||||++...+.|..
T Consensus 264 ~~~~~~~~D~iI~~S~~~~~~l~~~-~~~-----~~~~~~ki~viP~g~~~~~~~~~~---------------------- 315 (500)
T TIGR02918 264 QFSNADYIDFFITATDIQNQILKNQ-FKK-----YYNIEPRIYTIPVGSLDELQYPEQ---------------------- 315 (500)
T ss_pred HHhchhhCCEEEECCHHHHHHHHHH-hhh-----hcCCCCcEEEEcCCCcccccCccc----------------------
Confidence 1223567899999999988887642 110 001357899999998754433210
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh--hhHHHHHh
Q 007130 551 QCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT--RFGRDAEE 616 (617)
Q Consensus 551 ~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~--~~e~~l~~ 616 (617)
.....+|+|+|||.++||++.||+|++.+.+ .+++|+|+|+|+. .+++++++
T Consensus 316 --------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~ 371 (500)
T TIGR02918 316 --------------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINE 371 (500)
T ss_pred --------------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHH
Confidence 0134589999999999999999999998875 4899999999973 55555543
No 75
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.03 E-value=1.6e-09 Score=120.29 Aligned_cols=162 Identities=18% Similarity=0.164 Sum_probs=106.4
Q ss_pred CcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHH
Q 007130 394 NLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAA 473 (617)
Q Consensus 394 pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~ 473 (617)
-|+|.+||+|..++|.+++.. ....++.|.+|-. ||..++ +.++-+. .-+..
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~------~~~~~igfFlHip-----fP~~e~---------f~~lp~r--------~~il~ 179 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLREL------GVQNKIGFFLHIP-----FPSSEI---------YRTLPWR--------RELLE 179 (456)
T ss_pred CCEEEEecchhhHHHHHHHhh------CCCCeEEEEEeCC-----CCChHH---------HhhCCcH--------HHHHH
Confidence 379999999999999998863 2457899999962 443322 1111111 22345
Q ss_pred HHhhcCeeEEeCHHHHHHHHhhh---cCCcc--cc-ccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccC
Q 007130 474 GLKTADRVVTVSRGYSWELKTAE---GGWGL--HN-IINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHT 547 (617)
Q Consensus 474 ~l~~AD~VIaVS~~~a~~l~~~~---~G~gL--~~-~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~ 547 (617)
++..||.|..-+..+++...+.. .|.-. .. ...-...++.+||||||++.|.|.... .
T Consensus 180 gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~----------------~ 243 (456)
T TIGR02400 180 GLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK----------------P 243 (456)
T ss_pred HHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC----------------h
Confidence 77889999999998888765421 11000 00 011245678999999999999764210 0
Q ss_pred CchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEEEEEe
Q 007130 548 GKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQLSHVG 604 (617)
Q Consensus 548 ~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~LVIvG 604 (617)
...+....+|++++ +.++|++||||++.||++.+++|++.+++. ++.|+++|
T Consensus 244 ~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~ 301 (456)
T TIGR02400 244 SVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIA 301 (456)
T ss_pred hHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEe
Confidence 00111123566653 568999999999999999999999998642 36688775
No 76
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.03 E-value=3e-09 Score=103.90 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=112.1
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDF 357 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v 357 (617)
-||++|..-=.|. ..||.|+.+.+|+..|+++||+|+|.|........ . ....|+++
T Consensus 2 kkIaIiGtrGIPa-~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~--~--------------------~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIPA-RYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK--E--------------------FEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCCc-ccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC--C--------------------cccCCeEE
Confidence 5899999887785 79999999999999999999999999976332111 0 12356676
Q ss_pred EEecCccccccCCCcCCCCCCcccccc-ccccc--cCCCCcEEEEcCcc-hhHHHHHHHHHhhhccCCCCceEEEEEeCC
Q 007130 358 VFLDSPLFRHLGNNIYGGGREIPWYVP-CGGVC--YGDGNLVFIANDWH-TALLPVYLKAYYRDNGLMQYTRSLLVIHNI 433 (617)
Q Consensus 358 ~~i~~p~~~~~~~~iy~~~~~~~~~l~-~~~v~--~~~~pDIIHaHd~~-tal~~~~l~~~~~~~~~~~~iPvV~TiH~~ 433 (617)
+.++.|.......-+|. .+.+. |.... ...+.||||++... .+++..+++.+. ..+.|+|+++|++
T Consensus 59 ~~i~~~~~g~~~si~yd-----~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~-----~~g~~v~vN~DGl 128 (185)
T PF09314_consen 59 VYIPAPKNGSAESIIYD-----FLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLR-----KKGGKVVVNMDGL 128 (185)
T ss_pred EEeCCCCCCchHHHHHH-----HHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhh-----hcCCcEEECCCcc
Confidence 66655432111001110 00010 10011 12357899999765 444544444321 2477999999997
Q ss_pred cccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEE
Q 007130 434 AHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLS 513 (617)
Q Consensus 434 ~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~ 513 (617)
+.. ...+ +. ..+.| ...-++.+.++||.+|+.|+.+.+.+.+. ++ ..+..
T Consensus 129 EWk----R~KW---~~------~~k~~------lk~~E~~avk~ad~lIaDs~~I~~y~~~~-y~----------~~~s~ 178 (185)
T PF09314_consen 129 EWK----RAKW---GR------PAKKY------LKFSEKLAVKYADRLIADSKGIQDYIKER-YG----------RKKST 178 (185)
T ss_pred hhh----hhhc---CH------HHHHH------HHHHHHHHHHhCCEEEEcCHHHHHHHHHH-cC----------CCCcE
Confidence 532 1111 10 01111 12356778899999999999999888864 22 36789
Q ss_pred EEecCCc
Q 007130 514 GIVNGID 520 (617)
Q Consensus 514 vIpNGID 520 (617)
+|++|.|
T Consensus 179 ~IaYGad 185 (185)
T PF09314_consen 179 FIAYGAD 185 (185)
T ss_pred EecCCCC
Confidence 9999986
No 77
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.02 E-value=6.4e-09 Score=113.75 Aligned_cols=101 Identities=20% Similarity=0.083 Sum_probs=76.1
Q ss_pred HHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCc
Q 007130 470 IFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGK 549 (617)
Q Consensus 470 l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k 549 (617)
+.+..++.+|+|+++|+..++.+.+. ++ ....++.+|+||+|...+.+..
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~~~-~~--------~~~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQKR-YP--------AYKEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHHH-CC--------CccccEEEEECCcccccccCCC---------------------
Confidence 44556789999999999998887653 22 2457899999999976553310
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC----CcEEEEEecChh--hhHHHH
Q 007130 550 PQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ----DVQLSHVGHWQT--RFGRDA 614 (617)
Q Consensus 550 ~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~----dv~LVIvG~G~~--~~e~~l 614 (617)
...+.++|+|+||+.+.||++.|++|+..+.+. +++|+++|+|+. .+++++
T Consensus 226 --------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~ 282 (407)
T cd04946 226 --------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELA 282 (407)
T ss_pred --------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHH
Confidence 012457899999999999999999999998753 577899999873 444444
No 78
>PHA01630 putative group 1 glycosyl transferase
Probab=98.98 E-value=3.9e-09 Score=112.65 Aligned_cols=96 Identities=11% Similarity=0.063 Sum_probs=72.7
Q ss_pred HHHHH-HhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCC
Q 007130 470 IFAAG-LKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTG 548 (617)
Q Consensus 470 l~k~~-l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~ 548 (617)
++... .+.||.||++|+.+++.+... |. . ...++.+||||||.+.|.|...
T Consensus 86 ~~~~~~~~~ad~ii~~S~~~~~~l~~~--g~------~-~~~~i~vIpNGVd~~~f~~~~~------------------- 137 (331)
T PHA01630 86 ALYFFRNQPVDEIVVPSQWSKNAFYTS--GL------K-IPQPIYVIPHNLNPRMFEYKPK------------------- 137 (331)
T ss_pred HHHHHhhccCCEEEECCHHHHHHHHHc--CC------C-CCCCEEEECCCCCHHHcCCCcc-------------------
Confidence 34455 578999999999999888642 21 0 1468999999999988865310
Q ss_pred chHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh
Q 007130 549 KPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT 608 (617)
Q Consensus 549 k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~ 608 (617)
. .....+|+|+||+.++||++.|++|++.+.+ .+++|+|+|+|..
T Consensus 138 ~---------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~ 184 (331)
T PHA01630 138 E---------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML 184 (331)
T ss_pred c---------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc
Confidence 0 0134577788899999999999999999875 4899999998753
No 79
>PHA01633 putative glycosyl transferase group 1
Probab=98.97 E-value=3e-08 Score=105.71 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=71.5
Q ss_pred HHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHH
Q 007130 473 AGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQC 552 (617)
Q Consensus 473 ~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~ 552 (617)
..+...+++|++|+.+++.+.+ .|+ +. .+ +|+||||++.|.|..+ .
T Consensus 88 ~~m~~~~~vIavS~~t~~~L~~--~G~--------~~-~i-~I~~GVD~~~f~p~~~----------------------~ 133 (335)
T PHA01633 88 KYLLQDVKFIPNSKFSAENLQE--VGL--------QV-DL-PVFHGINFKIVENAEK----------------------L 133 (335)
T ss_pred HHHhcCCEEEeCCHHHHHHHHH--hCC--------CC-ce-eeeCCCChhhcCccch----------------------h
Confidence 3444567999999999998875 232 22 23 5889999999876421 1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEEEEEecC
Q 007130 553 KAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQLSHVGHW 606 (617)
Q Consensus 553 K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~LVIvG~G 606 (617)
...++++++... ++.++|+++|||+++||++.|++|++.+.+. +++|+++|.+
T Consensus 134 ~~~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~ 192 (335)
T PHA01633 134 VPQLKQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK 192 (335)
T ss_pred hHHHHHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH
Confidence 123666666532 3568999999999999999999999998652 4688888753
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.94 E-value=6e-09 Score=112.93 Aligned_cols=150 Identities=13% Similarity=0.022 Sum_probs=100.3
Q ss_pred cccCCCCcEEEEcC-cchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 388 VCYGDGNLVFIAND-WHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 388 v~~~~~pDIIHaHd-~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++...+|||||+|. |...+....+....+. ...++|++.++++.. . ..
T Consensus 95 ~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~--~~~~~p~~~~~tD~~-~-~~--------------------------- 143 (382)
T PLN02605 95 GLMKYKPDIIVSVHPLMQHVPLRVLRWQGKE--LGKKIPFTTVVTDLG-T-CH--------------------------- 143 (382)
T ss_pred HHHhcCcCEEEEeCcCcccCHHHHHHHHhhc--cCCCCCEEEEECCCC-C-cC---------------------------
Confidence 45667999999853 4333222223222111 125789888877631 0 00
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccccc
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLH 546 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~ 546 (617)
..+..+.+|.++++|+.+++.+.. .|. +..++.+++++||.+.+.+.
T Consensus 144 ----~~w~~~~~d~~~~~s~~~~~~l~~--~g~--------~~~ki~v~g~~v~~~f~~~~------------------- 190 (382)
T PLN02605 144 ----PTWFHKGVTRCFCPSEEVAKRALK--RGL--------EPSQIRVYGLPIRPSFARAV------------------- 190 (382)
T ss_pred ----cccccCCCCEEEECCHHHHHHHHH--cCC--------CHHHEEEECcccCHhhccCC-------------------
Confidence 012245799999999999888774 232 57899999999987544321
Q ss_pred CCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc------CCCcE-EEEEecCh
Q 007130 547 TGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM------GQDVQ-LSHVGHWQ 607 (617)
Q Consensus 547 ~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~------~~dv~-LVIvG~G~ 607 (617)
..+..+|+++|++ ++.++|+++||....||+..+++++..+. ..+++ ++|+|.++
T Consensus 191 ----~~~~~~r~~~gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~ 252 (382)
T PLN02605 191 ----RPKDELRRELGMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK 252 (382)
T ss_pred ----CCHHHHHHHcCCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH
Confidence 1235588999997 46799999999999999999999998654 24565 67888775
No 81
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.92 E-value=1.6e-08 Score=110.84 Aligned_cols=161 Identities=14% Similarity=0.063 Sum_probs=100.5
Q ss_pred cccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchh
Q 007130 388 VCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEH 467 (617)
Q Consensus 388 v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~ 467 (617)
++...+||+||+|+.. +.|.++... + ..++|+|++.|.+... .+ ..+++ .
T Consensus 119 ~l~~~~Pd~v~~~~~~--~~~~~l~~~-~----~~~ip~vl~~~~~~~~------s~----------~~~~~-------~ 168 (425)
T PRK05749 119 FLRFWRPKLVIIMETE--LWPNLIAEL-K----RRGIPLVLANARLSER------SF----------KRYQK-------F 168 (425)
T ss_pred HHHhhCCCEEEEEecc--hhHHHHHHH-H----HCCCCEEEEeccCChh------hH----------HHHHH-------H
Confidence 4566789999988532 223222221 1 2689999876653110 00 00000 1
Q ss_pred HHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccC
Q 007130 468 FNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHT 547 (617)
Q Consensus 468 ~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~ 547 (617)
..+++..++.+|.|+++|+..++.+.. .|. +.. +.+++|+ +.+.+.+..
T Consensus 169 ~~~~r~~~~~~d~ii~~S~~~~~~l~~--~g~--------~~~-i~vi~n~-~~d~~~~~~------------------- 217 (425)
T PRK05749 169 KRFYRLLFKNIDLVLAQSEEDAERFLA--LGA--------KNE-VTVTGNL-KFDIEVPPE------------------- 217 (425)
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHHHH--cCC--------CCC-cEecccc-cccCCCChh-------------------
Confidence 235667788999999999999988764 231 345 8888884 333332110
Q ss_pred CchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh---hhHHHHHh
Q 007130 548 GKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT---RFGRDAEE 616 (617)
Q Consensus 548 ~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~---~~e~~l~~ 616 (617)
....+..++++++ + +.++|+|+|+. .|+.++|++|++.+.+ .+++|+|+|+|+. ++++++++
T Consensus 218 -~~~~~~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~ 284 (425)
T PRK05749 218 -LAARAATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKEVEELLKK 284 (425)
T ss_pred -hHHHHHHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHh
Confidence 0112345677776 3 46788999875 6889999999998765 4899999999974 45555543
No 82
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.87 E-value=2.6e-08 Score=106.42 Aligned_cols=147 Identities=16% Similarity=0.121 Sum_probs=95.0
Q ss_pred CCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHH
Q 007130 392 DGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIF 471 (617)
Q Consensus 392 ~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~ 471 (617)
.++|||++|.......++ +.. ....+.|+++|+...... + ... . . .+. . .....
T Consensus 98 ~~~diii~~~~~~~~~~~-~~~-------~~~~~~i~~~h~~~~~~~-~-~~~---~--~-~~~--~--------~~~~~ 151 (372)
T cd04949 98 TKPDVFILDRPTLDGQAL-LNM-------KKAAKVVVVLHSNHVSDN-N-DPV---H--S-LIN--N--------FYEYV 151 (372)
T ss_pred CCCCEEEECCccccchhH-Hhc-------cCCceEEEEEChHHhCCc-c-ccc---c--c-ccc--h--------hhHHH
Confidence 679999998754433322 111 245678999998422110 0 000 0 0 000 0 01122
Q ss_pred HHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchH
Q 007130 472 AAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQ 551 (617)
Q Consensus 472 k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~ 551 (617)
...+..+|.||++|+..++.+... ++ ...++.+||||+|...+.+...
T Consensus 152 ~~~~~~~d~ii~~s~~~~~~l~~~-~~---------~~~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 152 FENLDKVDGVIVATEQQKQDLQKQ-FG---------NYNPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HhChhhCCEEEEccHHHHHHHHHH-hC---------CCCceEEEcccccChhhcccch----------------------
Confidence 234578999999999988887653 22 2345899999999876644200
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC--CCcEEEEEecChh
Q 007130 552 CKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT 608 (617)
Q Consensus 552 ~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~ 608 (617)
. ......|+|+||+.++||++.+++|+..+.. .+++|+|+|.|+.
T Consensus 200 ----------~--~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~ 246 (372)
T cd04949 200 ----------K--QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE 246 (372)
T ss_pred ----------h--hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch
Confidence 0 1235689999999999999999999999875 4899999999873
No 83
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.71 E-value=6.9e-08 Score=113.99 Aligned_cols=152 Identities=22% Similarity=0.242 Sum_probs=93.4
Q ss_pred cEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHH
Q 007130 395 LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAG 474 (617)
Q Consensus 395 DIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~ 474 (617)
|+|=+||+|..++|.+++.. ....++.|.+|.. ||..++.. -+|. . .-+..+
T Consensus 149 d~vWvhDYhL~llp~~lR~~------~~~~~igfFlHiP-----FPs~e~fr-~lp~--------r--------~~il~g 200 (797)
T PLN03063 149 DVVWCHDYHLMFLPQYLKEY------NNKMKVGWFLHTP-----FPSSEIYK-TLPS--------R--------SELLRA 200 (797)
T ss_pred CEEEEecchhhhHHHHHHHh------CCCCcEEEEecCC-----CCCHHHHh-hCCC--------H--------HHHHHH
Confidence 79999999999999999864 3578999999983 44432211 1111 0 112245
Q ss_pred HhhcCeeEEeCHHHHHHHHhhhcC-Cccc----cc-cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCC
Q 007130 475 LKTADRVVTVSRGYSWELKTAEGG-WGLH----NI-INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTG 548 (617)
Q Consensus 475 l~~AD~VIaVS~~~a~~l~~~~~G-~gL~----~~-l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~ 548 (617)
+..||.|-.-+..+++...+..-. .|+. .+ ..-...+|.+||||||++.|.+.... . .
T Consensus 201 ll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~-----------~-----~ 264 (797)
T PLN03063 201 VLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL-----------P-----E 264 (797)
T ss_pred HhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC-----------h-----h
Confidence 556666666666666554431000 0000 00 11134578999999999888653210 0 0
Q ss_pred chHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC
Q 007130 549 KPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG 595 (617)
Q Consensus 549 k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~ 595 (617)
..+..+.+++.++ ++++|++||||++.||++.+++|++.+++
T Consensus 265 ~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~ 306 (797)
T PLN03063 265 VKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLE 306 (797)
T ss_pred HHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHH
Confidence 0111123455543 46899999999999999999999999865
No 84
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.71 E-value=7.2e-08 Score=113.18 Aligned_cols=163 Identities=20% Similarity=0.203 Sum_probs=99.1
Q ss_pred CcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHH
Q 007130 394 NLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAA 473 (617)
Q Consensus 394 pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~ 473 (617)
-|+|-+||+|..++|.+++.. ....++-|.+|-. ||...+..+ +|.. .-+-.
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~------~~~~~igfFlH~p-----fP~~~~f~~-lp~~----------------~~ll~ 185 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRER------LPDARIGFFLHIP-----FPSFEVFRL-LPWR----------------EEILE 185 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhh------CCCCcEEEEeeCC-----CCChHHHhh-CCCh----------------HHHHH
Confidence 389999999999999998763 2467888999974 444322111 2210 11223
Q ss_pred HHhhcCeeEEeCHHHHHHHHhh---hcCCc--c-ccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccC
Q 007130 474 GLKTADRVVTVSRGYSWELKTA---EGGWG--L-HNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHT 547 (617)
Q Consensus 474 ~l~~AD~VIaVS~~~a~~l~~~---~~G~g--L-~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~ 547 (617)
++..||.|-.-+..+++...+. ..|.- . .-.+.-...++.+||||||++.|.+.... .
T Consensus 186 ~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~-----------~----- 249 (726)
T PRK14501 186 GLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD-----------P----- 249 (726)
T ss_pred HHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC-----------c-----
Confidence 4555666666665555543321 00100 0 00011123468999999999999764210 0
Q ss_pred CchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEEEEEec
Q 007130 548 GKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQLSHVGH 605 (617)
Q Consensus 548 ~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~LVIvG~ 605 (617)
.-....+.+|+.++ +.++|++||||++.||++.+++|++.+++. +++|+++|.
T Consensus 250 ~~~~~~~~lr~~~~-----~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~ 308 (726)
T PRK14501 250 EVQEEIRRLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAV 308 (726)
T ss_pred hHHHHHHHHHHHcC-----CCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEec
Confidence 00111223455432 567999999999999999999999988652 478999874
No 85
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.69 E-value=8.6e-08 Score=102.15 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=100.4
Q ss_pred cccCCCCcEEEEcCcc-hhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 388 VCYGDGNLVFIANDWH-TALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 388 v~~~~~pDIIHaHd~~-tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++...+|||||+|... ..+++.++.. ..++|+|++.|+... +.. +.+..
T Consensus 83 ~l~~~~pDvV~~~g~~~~~~~~~~aa~-------~~~iPvv~~~~g~~s---~~~------~~~~~-------------- 132 (363)
T cd03786 83 VLLEEKPDLVLVLGDTNETLAAALAAF-------KLGIPVAHVEAGLRS---FDR------GMPDE-------------- 132 (363)
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHH-------HcCCCEEEEeccccc---CCC------CCCch--------------
Confidence 3455689999999643 3343433332 258999876666311 000 00000
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCC-cCCCCCCccccccccCCCCccccccc
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGI-DTKEWSPMYDIHLTSDGYTNYCLDTL 545 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGI-D~~~f~P~~d~~l~~~~~~~~~~e~~ 545 (617)
....+..+.+|.++++|+..++.+.+ .| .+++++.+|+|++ |...|.+...
T Consensus 133 --~~r~~~~~~ad~~~~~s~~~~~~l~~--~G--------~~~~kI~vign~v~d~~~~~~~~~---------------- 184 (363)
T cd03786 133 --ENRHAIDKLSDLHFAPTEEARRNLLQ--EG--------EPPERIFVVGNTMIDALLRLLELA---------------- 184 (363)
T ss_pred --HHHHHHHHHhhhccCCCHHHHHHHHH--cC--------CCcccEEEECchHHHHHHHHHHhh----------------
Confidence 01112346789999999998888764 23 2678999999995 5433221100
Q ss_pred cCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCcc---ccCHHHHHHHHHhccCCCcEEEEEecCh--hhhHHHHHh
Q 007130 546 HTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDH---QKGVDLIAEAIPWMMGQDVQLSHVGHWQ--TRFGRDAEE 616 (617)
Q Consensus 546 ~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~---qKGvdlLIeA~~~L~~~dv~LVIvG~G~--~~~e~~l~~ 616 (617)
+ ....++.++++ ++..++++.||+.. .||++.|++|+..+...++.+++.|+++ ..+++.+++
T Consensus 185 ---~---~~~~~~~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~ 252 (363)
T cd03786 185 ---K---KELILELLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLE 252 (363)
T ss_pred ---c---cchhhhhcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHh
Confidence 0 01124566765 34457778999885 7999999999998864457888877765 566665543
No 86
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.68 E-value=1.4e-07 Score=86.76 Aligned_cols=138 Identities=17% Similarity=0.234 Sum_probs=81.8
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcEEE
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFV 358 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~v~ 358 (617)
|||+|+... +.++.+++++|.++|++|+|+++.... ... ....|+.++
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~----------------------~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY-EKY----------------------EIIEGIKVI 48 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhh----------------------hHhCCeEEE
Confidence 688888643 357889999999999999999985432 110 012445555
Q ss_pred EecCccccccCCCcCCCCCCccccccccccccCCCCcEEEEcCcch-hHHHHHHHHHhhhccCCCCceEEEEEeCCcccC
Q 007130 359 FLDSPLFRHLGNNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHT-ALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQG 437 (617)
Q Consensus 359 ~i~~p~~~~~~~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~t-al~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg 437 (617)
.+..+.- ...... . .+.+ ..++...+|||||+|...+ ++++.+++.. ...+|+|+|.|+..+..
T Consensus 49 ~~~~~~k-----~~~~~~-~-~~~l--~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~------~~~~~~i~~~hg~~~~~ 113 (139)
T PF13477_consen 49 RLPSPRK-----SPLNYI-K-YFRL--RKIIKKEKPDVIHCHTPSPYGLFAMLAKKL------LKNKKVIYTVHGSDFYN 113 (139)
T ss_pred EecCCCC-----ccHHHH-H-HHHH--HHHhccCCCCEEEEecCChHHHHHHHHHHH------cCCCCEEEEecCCeeec
Confidence 5432210 000000 0 0111 2455678899999998765 5656555432 23489999999853210
Q ss_pred CCCCCcccccCCCccccccccccCCCCchhHHHHHHHHhhcCeeEEeC
Q 007130 438 RGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAGLKTADRVVTVS 485 (617)
Q Consensus 438 ~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS 485 (617)
.+. .. ++ ...+++.+++.||.|++.|
T Consensus 114 -~~~----------~~----~~-------~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 114 -SSK----------KK----KL-------KKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred -CCc----------hH----HH-------HHHHHHHHHHhCCEEEEcC
Confidence 000 00 00 1246778899999999876
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=98.64 E-value=2.3e-07 Score=103.39 Aligned_cols=165 Identities=18% Similarity=0.152 Sum_probs=105.8
Q ss_pred CcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHH
Q 007130 394 NLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAA 473 (617)
Q Consensus 394 pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~ 473 (617)
-|+|=+||+|..++|.+++.. ....++-|-+|-. ||..++.. -+|. . .-+-.
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~------~~~~~IgfFlHiP-----FPs~eifr-~LP~--------r--------~~ll~ 184 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQL------RPDLKIAFFHHTP-----FPSADVFN-ILPW--------R--------EQIIG 184 (487)
T ss_pred CCEEEEecchhhHHHHHHHHh------CCCCeEEEEeeCC-----CCChHHHh-hCCc--------h--------HHHHH
Confidence 379999999999999998763 2467888888873 44432211 1221 0 12234
Q ss_pred HHhhcCeeEEeCHHHHHHHHhhhcC-Cccccc--------------------------cccCCCcEEEEecCCcCCCCCC
Q 007130 474 GLKTADRVVTVSRGYSWELKTAEGG-WGLHNI--------------------------INEVDWKLSGIVNGIDTKEWSP 526 (617)
Q Consensus 474 ~l~~AD~VIaVS~~~a~~l~~~~~G-~gL~~~--------------------------l~~~~~kI~vIpNGID~~~f~P 526 (617)
++-.||.|-.-...+++...+..-. .|+... ++-..-++.++|.|||++.|.+
T Consensus 185 glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~ 264 (487)
T TIGR02398 185 SLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRS 264 (487)
T ss_pred HHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHH
Confidence 5566777777777766654431100 001000 0012335899999999998865
Q ss_pred ccccccccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEE
Q 007130 527 MYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQL 600 (617)
Q Consensus 527 ~~d~~l~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~L 600 (617)
.... ..-....+.+|++++ ++++|+.|+||++.||+...++|++.+++. ++.|
T Consensus 265 ~~~~----------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~L 323 (487)
T TIGR02398 265 ALAA----------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTL 323 (487)
T ss_pred HhcC----------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEE
Confidence 3210 001122345788876 468999999999999999999999998752 5899
Q ss_pred EEEecCh
Q 007130 601 SHVGHWQ 607 (617)
Q Consensus 601 VIvG~G~ 607 (617)
|++|.+.
T Consensus 324 vqi~~ps 330 (487)
T TIGR02398 324 VTACVPA 330 (487)
T ss_pred EEEeCCC
Confidence 9999864
No 88
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.61 E-value=5.9e-07 Score=87.19 Aligned_cols=37 Identities=35% Similarity=0.586 Sum_probs=33.6
Q ss_pred EEeCCccccCHHHHHHHHHhccCC--CcEEEEEecChhh
Q 007130 573 FIGRLDHQKGVDLIAEAIPWMMGQ--DVQLSHVGHWQTR 609 (617)
Q Consensus 573 fVGRL~~qKGvdlLIeA~~~L~~~--dv~LVIvG~G~~~ 609 (617)
|+||+.+.||++.+++|+..+.+. +++++|+|.+...
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~ 147 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER 147 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh
Confidence 999999999999999999998764 8999999998743
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.48 E-value=1.9e-06 Score=93.15 Aligned_cols=97 Identities=20% Similarity=0.169 Sum_probs=70.3
Q ss_pred HHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCC
Q 007130 469 NIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTG 548 (617)
Q Consensus 469 ~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~ 548 (617)
.+++..++.||.|+++|+.+.+.+.. ...++.+|+||||.+.|.+..... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~-------------~~~~i~~i~ngvd~~~f~~~~~~~----------------~ 195 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR-------------LNPNVVLVPNGVDYEHFAAARDPP----------------P 195 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh-------------CCCCEEEcccccCHHHhhcccccC----------------C
Confidence 46788899999999999998876653 126799999999999886632100 0
Q ss_pred chHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCcEEEEEecC
Q 007130 549 KPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHVGHW 606 (617)
Q Consensus 549 k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv~LVIvG~G 606 (617)
. .+.... .+.++|+|+|++.+.+++++|.+++.. ..+++|+|+|.|
T Consensus 196 ~------~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~ 241 (373)
T cd04950 196 P------PADLAA----LPRPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPV 241 (373)
T ss_pred C------hhHHhc----CCCCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCC
Confidence 0 111111 256899999999998888877665543 258999999998
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.41 E-value=6.4e-07 Score=96.36 Aligned_cols=146 Identities=14% Similarity=0.004 Sum_probs=82.9
Q ss_pred ccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 387 GVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 387 ~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++++..+||+||+|++..... .++... + ..++|+|+..|+..+. +. +
T Consensus 79 ~~l~~~kPdivi~~~~~~~~~-~~a~~a-~----~~~ip~i~~~~~~~~~--~~---------~---------------- 125 (380)
T PRK00025 79 RRLLAEPPDVFIGIDAPDFNL-RLEKKL-R----KAGIPTIHYVSPSVWA--WR---------Q---------------- 125 (380)
T ss_pred HHHHHcCCCEEEEeCCCCCCH-HHHHHH-H----HCCCCEEEEeCCchhh--cC---------c----------------
Confidence 345677999999997533222 222111 1 2579999876652110 00 0
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccccc
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLH 546 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~ 546 (617)
...+...+.+|.|+++|+..++.+.. .| .++.++.|.+... +.+.
T Consensus 126 --~~~~~~~~~~d~i~~~~~~~~~~~~~--~g-----------~~~~~~G~p~~~~-~~~~------------------- 170 (380)
T PRK00025 126 --GRAFKIAKATDHVLALFPFEAAFYDK--LG-----------VPVTFVGHPLADA-IPLL------------------- 170 (380)
T ss_pred --hHHHHHHHHHhhheeCCccCHHHHHh--cC-----------CCeEEECcCHHHh-cccc-------------------
Confidence 01122356789999999876665542 11 2344554444321 1100
Q ss_pred CCchHHHHHHHHHhCCCCCCCCcEE-EEEe-CCccc-cCHHHHHHHHHhccC--CCcEEEEEecC
Q 007130 547 TGKPQCKAALQREFGLPVRDDVPVI-GFIG-RLDHQ-KGVDLIAEAIPWMMG--QDVQLSHVGHW 606 (617)
Q Consensus 547 ~~k~~~K~~Lr~~lGl~~~~d~~vI-lfVG-RL~~q-KGvdlLIeA~~~L~~--~dv~LVIvG~G 606 (617)
..+..+++++|++ ++.++| ++.| |.... ++++.+++|++.+.+ .+++++++|.+
T Consensus 171 ----~~~~~~~~~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~ 229 (380)
T PRK00025 171 ----PDRAAARARLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVN 229 (380)
T ss_pred ----cChHHHHHHcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 0124567788986 345654 4445 55554 457999999998864 37899999863
No 91
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.36 E-value=1.7e-06 Score=93.01 Aligned_cols=154 Identities=16% Similarity=0.033 Sum_probs=93.7
Q ss_pred cccCCCCcEEEEc-CcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 388 VCYGDGNLVFIAN-DWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 388 v~~~~~pDIIHaH-d~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++...+||+||+| |+..++++.++.. ..++|++.+-++....+.+ ..++.
T Consensus 81 ~l~~~~pDiv~~~gd~~~~la~a~aa~-------~~~ipv~h~~~g~~s~~~~-------~~~~~--------------- 131 (365)
T TIGR00236 81 LLLEEKPDIVLVQGDTTTTLAGALAAF-------YLQIPVGHVEAGLRTGDRY-------SPMPE--------------- 131 (365)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHH-------HhCCCEEEEeCCCCcCCCC-------CCCcc---------------
Confidence 4567789999999 5666666555543 2689987654443100000 00110
Q ss_pred hHHHHHHH-HhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCC-cCCCCCCccccccccCCCCcccccc
Q 007130 467 HFNIFAAG-LKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGI-DTKEWSPMYDIHLTSDGYTNYCLDT 544 (617)
Q Consensus 467 ~~~l~k~~-l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGI-D~~~f~P~~d~~l~~~~~~~~~~e~ 544 (617)
...+.. .+.||.++++|+..++.+.+. | .++++|.+++||+ |...+.+..
T Consensus 132 --~~~r~~~~~~ad~~~~~s~~~~~~l~~~--G--------~~~~~I~vign~~~d~~~~~~~~---------------- 183 (365)
T TIGR00236 132 --EINRQLTGHIADLHFAPTEQAKDNLLRE--N--------VKADSIFVTGNTVIDALLTNVEI---------------- 183 (365)
T ss_pred --HHHHHHHHHHHHhccCCCHHHHHHHHHc--C--------CCcccEEEeCChHHHHHHHHHhh----------------
Confidence 011222 235899999999999988752 3 2678999999996 532221100
Q ss_pred ccCCchHHHHHHHHHhCCCCCCCCcEEEEEe-CC-ccccCHHHHHHHHHhccC--CCcEEEEEecChh
Q 007130 545 LHTGKPQCKAALQREFGLPVRDDVPVIGFIG-RL-DHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT 608 (617)
Q Consensus 545 ~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVG-RL-~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~ 608 (617)
..+..++++++. +.+++++.| |. ...||++.|++|+..+.+ .+++++++|.+..
T Consensus 184 ------~~~~~~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~ 241 (365)
T TIGR00236 184 ------AYSSPVLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP 241 (365)
T ss_pred ------ccchhHHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh
Confidence 001235566663 235666655 54 346999999999998764 3789999876543
No 92
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.33 E-value=4.7e-06 Score=90.82 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=65.7
Q ss_pred HhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHH
Q 007130 475 LKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKA 554 (617)
Q Consensus 475 l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~ 554 (617)
.+.+|.++++|+.+++.+.. .|. +..++.++.|+|+.. |.+.. .+.
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~--~gi--------~~~ki~v~GiPv~~~-f~~~~-----------------------~~~ 190 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID--VGI--------DPSTVKVTGIPIDNK-FETPI-----------------------DQK 190 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH--cCC--------CHHHEEEECeecChH-hcccc-----------------------cHH
Confidence 35789999999999888764 231 567888887777643 32210 123
Q ss_pred HHHHHhCCCCCCCCc-EEEEEeCCccccCHHHHHHHHHhccCCCcEEEEE-ecCh
Q 007130 555 ALQREFGLPVRDDVP-VIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHV-GHWQ 607 (617)
Q Consensus 555 ~Lr~~lGl~~~~d~~-vIlfVGRL~~qKGvdlLIeA~~~L~~~dv~LVIv-G~G~ 607 (617)
.+++++|++. +.+ ++++.||+...||++.+++++... ..+++++++ |.++
T Consensus 191 ~~~~~~~l~~--~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~ 242 (391)
T PRK13608 191 QWLIDNNLDP--DKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSK 242 (391)
T ss_pred HHHHHcCCCC--CCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCH
Confidence 4677889863 444 456799999999999999986332 147888666 4443
No 93
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.28 E-value=8.4e-06 Score=86.89 Aligned_cols=137 Identities=15% Similarity=0.056 Sum_probs=79.8
Q ss_pred CCCC-cEEEEcCcch-h-HH-HHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 391 GDGN-LVFIANDWHT-A-LL-PVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 391 ~~~p-DIIHaHd~~t-a-l~-~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
..++ |+||+|.... + ++ ..++... + ..++|+|+++|++.+.. .. .. ..
T Consensus 61 ~~~~~Dvv~~~~P~~~~~~~~~~~~~~~-k----~~~~k~i~~ihD~~~~~-~~-------~~--~~------------- 112 (333)
T PRK09814 61 SLKPGDIVIFQFPTWNGFEFDRLFVDKL-K----KKQVKIIILIHDIEPLR-FD-------SN--YY------------- 112 (333)
T ss_pred cCCCCCEEEEECCCCchHHHHHHHHHHH-H----HcCCEEEEEECCcHHHh-cc-------cc--ch-------------
Confidence 3456 9999987432 1 11 2222221 1 13799999999963321 00 00 00
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccccc
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLH 546 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~ 546 (617)
...+++..++.||.||++|+.+++.+.+ .| + +..++.+++|+.+.....+
T Consensus 113 ~~~~~~~~~~~aD~iI~~S~~~~~~l~~--~g--~------~~~~i~~~~~~~~~~~~~~-------------------- 162 (333)
T PRK09814 113 LMKEEIDMLNLADVLIVHSKKMKDRLVE--EG--L------TTDKIIVQGIFDYLNDIEL-------------------- 162 (333)
T ss_pred hhHHHHHHHHhCCEEEECCHHHHHHHHH--cC--C------CcCceEecccccccccccc--------------------
Confidence 1245678889999999999999998874 23 1 3456766665543211100
Q ss_pred CCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCCCcEEEEEecChh
Q 007130 547 TGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHVGHWQT 608 (617)
Q Consensus 547 ~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~dv~LVIvG~G~~ 608 (617)
+.. ....++|+|+|||....++. + ...+++|+|+|+|+.
T Consensus 163 ----------~~~-----~~~~~~i~yaG~l~k~~~l~---~-----~~~~~~l~i~G~g~~ 201 (333)
T PRK09814 163 ----------VKT-----PSFQKKINFAGNLEKSPFLK---N-----WSQGIKLTVFGPNPE 201 (333)
T ss_pred ----------ccc-----ccCCceEEEecChhhchHHH---h-----cCCCCeEEEECCCcc
Confidence 000 12346899999999543211 1 124789999999873
No 94
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.96 E-value=2.4e-05 Score=85.36 Aligned_cols=146 Identities=8% Similarity=-0.104 Sum_probs=87.0
Q ss_pred ccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 387 GVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 387 ~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++++..+||+|+++++.+..+.+ ++. .+ ..++|+|+.+ .. .+..|+ .
T Consensus 83 ~~l~~~kPd~vi~~g~~~~~~~~-a~a-a~----~~gip~v~~i-~P-~~waw~--------------------~----- 129 (385)
T TIGR00215 83 QLAKQAKPDLLVGIDAPDFNLTK-ELK-KK----DPGIKIIYYI-SP-QVWAWR--------------------K----- 129 (385)
T ss_pred HHHHhcCCCEEEEeCCCCccHHH-HHH-Hh----hCCCCEEEEe-CC-cHhhcC--------------------c-----
Confidence 45677899999999974422222 111 11 3689998544 11 110010 0
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccccc
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLH 546 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~ 546 (617)
+.-+...+.+|+|+++++...+.+.. . ..+..++.|++-.... +..
T Consensus 130 --~~~r~l~~~~d~v~~~~~~e~~~~~~--~-----------g~~~~~vGnPv~~~~~-~~~------------------ 175 (385)
T TIGR00215 130 --WRAKKIEKATDFLLAILPFEKAFYQK--K-----------NVPCRFVGHPLLDAIP-LYK------------------ 175 (385)
T ss_pred --chHHHHHHHHhHhhccCCCcHHHHHh--c-----------CCCEEEECCchhhhcc-ccC------------------
Confidence 11234456899999999876655442 1 1355667777632211 100
Q ss_pred CCchHHHHHHHHHhCCCCCCCCcEEEEEe--CCcc-ccCHHHHHHHHHhccC--CCcEEEEEec
Q 007130 547 TGKPQCKAALQREFGLPVRDDVPVIGFIG--RLDH-QKGVDLIAEAIPWMMG--QDVQLSHVGH 605 (617)
Q Consensus 547 ~~k~~~K~~Lr~~lGl~~~~d~~vIlfVG--RL~~-qKGvdlLIeA~~~L~~--~dv~LVIvG~ 605 (617)
..+...|+++|++ ++.++|++.| |..+ .|++..+++|+..+.+ .+++++++|.
T Consensus 176 ----~~~~~~r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~ 233 (385)
T TIGR00215 176 ----PDRKSAREKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVV 233 (385)
T ss_pred ----CCHHHHHHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeC
Confidence 0123467788886 4567777653 8887 8999999999998865 3788876543
No 95
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.86 E-value=7.6e-05 Score=88.90 Aligned_cols=152 Identities=20% Similarity=0.201 Sum_probs=96.4
Q ss_pred cEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHH
Q 007130 395 LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAG 474 (617)
Q Consensus 395 DIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~ 474 (617)
|+|=+||+|..++|.+++.. ....++-|.+|-. ||..++ +.++-+. .-+..+
T Consensus 233 D~VWVHDYHL~LlP~~LR~~------~p~~~IGfFlHiP-----FPs~Ei---------fr~LP~r--------~elL~g 284 (934)
T PLN03064 233 DVVWCHDYHLMFLPKCLKEY------NSNMKVGWFLHTP-----FPSSEI---------HRTLPSR--------SELLRS 284 (934)
T ss_pred CEEEEecchhhHHHHHHHHh------CCCCcEEEEecCC-----CCChHH---------HhhCCcH--------HHHHHH
Confidence 79999999999999999864 3567888999973 454322 1111111 122356
Q ss_pred HhhcCeeEEeCHHHHHHHHhhhc-CCcccc---cccc--CCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCC
Q 007130 475 LKTADRVVTVSRGYSWELKTAEG-GWGLHN---IINE--VDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTG 548 (617)
Q Consensus 475 l~~AD~VIaVS~~~a~~l~~~~~-G~gL~~---~l~~--~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~ 548 (617)
+-.||.|-.-+..|++....... -.|+.. .+.. ...++.+.|-|||++.|...... . .
T Consensus 285 lL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~-----------~-----~ 348 (934)
T PLN03064 285 VLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET-----------P-----Q 348 (934)
T ss_pred HhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC-----------h-----h
Confidence 67788888888887776543110 001110 0100 12346788999999888643210 0 0
Q ss_pred chHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC
Q 007130 549 KPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG 595 (617)
Q Consensus 549 k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~ 595 (617)
-.+..+.++++++ ++++|+.|+||++.||+...++|+..+++
T Consensus 349 v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~ 390 (934)
T PLN03064 349 VQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLE 390 (934)
T ss_pred HHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHH
Confidence 0112234677765 46799999999999999999999998765
No 96
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=97.71 E-value=0.00083 Score=72.47 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=23.0
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
+||==.-+..++++|.++||+|.+++..++
T Consensus 11 TGGHi~Pala~a~~l~~~g~~v~~vg~~~~ 40 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDNWDISYIGSHQG 40 (352)
T ss_pred cHHHHHHHHHHHHHHHhCCCEEEEEECCCc
Confidence 444444457899999999999999986554
No 97
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.71 E-value=3.3e-05 Score=89.04 Aligned_cols=315 Identities=22% Similarity=0.215 Sum_probs=173.7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC-CCCCCCC-C---------------c---c----e----eEeecc
Q 007130 289 PWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN-YAEPQDT-G---------------I---R----K----RYRVDR 340 (617)
Q Consensus 289 P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~-~~~~~~~-~---------------~---~----~----~~~~~g 340 (617)
|.. .||+|+.+.+..+.++.+|...+.++..|.. +.++.+. | + + . .+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 543 4999999999999999999999999877642 2211000 0 1 0 0 111122
Q ss_pred -ccceEEEEEeeeCCcEEEEecCcc------ccccCCCcCCCC-CCcccc--cc--ccc---cccC-------CCCcEEE
Q 007130 341 -QDIEVAYFQAYIDGVDFVFLDSPL------FRHLGNNIYGGG-REIPWY--VP--CGG---VCYG-------DGNLVFI 398 (617)
Q Consensus 341 -~~~~~~v~~~~~~gV~v~~i~~p~------~~~~~~~iy~~~-~~~~~~--l~--~~~---v~~~-------~~pDIIH 398 (617)
....+++|......+++++.+.-. -.......|+.. .+++.+ ++ ++. +... .++.+.|
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds~elRl~Qeyfl~~agvq~I~~~~~~~~~~~~~~~~~ 269 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDSKELRLKQEYFLGSAGVQDILARGHLEHHDLDVLADH 269 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCcHHHHHhhhheeeeHHHHHHHHHhhhccccccchhhh
Confidence 335667777777777777765311 111123566655 322221 11 111 1111 4556789
Q ss_pred EcCcchhHHHHHHHHH-hhhccC-------CCCceEEEEEeCCcccCC--CCCCcccccCCCccccc----------ccc
Q 007130 399 ANDWHTALLPVYLKAY-YRDNGL-------MQYTRSLLVIHNIAHQGR--GPVSDFVYTDLPGHYLD----------LFK 458 (617)
Q Consensus 399 aHd~~tal~~~~l~~~-~~~~~~-------~~~iPvV~TiH~~~~qg~--~p~~~~~~~glp~~~~~----------~l~ 458 (617)
.||-|.+++.+.+.+. ....+. ....-++||.|++-..|. ||...+..+ +|.++.. ..+
T Consensus 270 lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~-lpr~~~ii~~in~~~l~~~~ 348 (750)
T COG0058 270 LNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKL-LPRHLQIIYEINARFLPEVR 348 (750)
T ss_pred hcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHH-hhhhhhhHHHHHhhhhHHHH
Confidence 9999988877655442 211111 234568999999754443 454332111 1111100 001
Q ss_pred ccCCC----Cchh---HHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccc
Q 007130 459 LYDPV----GGEH---FNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIH 531 (617)
Q Consensus 459 ~~d~~----~g~~---~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~ 531 (617)
...+- .+.. ++|...++..+..|..||.-+.+.+.+..+. ..+.+ .+.||.-|.|||....|--...+.
T Consensus 349 ~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~-~~~~~---~p~~i~nvTNGIt~rrWl~~~n~~ 424 (750)
T COG0058 349 LLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMWFA-DFHGL---YPEKINNVTNGITPRRWLAPANPG 424 (750)
T ss_pred hhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHHHH-Hhccc---CccccccccCCcCCchhhhhhhHH
Confidence 11100 0111 5677778889999999999887776653221 11112 378899999999999983221111
Q ss_pred ccc-------C-CCCc---------cc-----cccccCCchHHHHHHH----HHhCCCCCCCCcEEEEEeCCccccCHHH
Q 007130 532 LTS-------D-GYTN---------YC-----LDTLHTGKPQCKAALQ----REFGLPVRDDVPVIGFIGRLDHQKGVDL 585 (617)
Q Consensus 532 l~~-------~-~~~~---------~~-----~e~~~~~k~~~K~~Lr----~~lGl~~~~d~~vIlfVGRL~~qKGvdl 585 (617)
+.. + +... |. .+.++.-|.++|..|. .+.|+..+++..+++|+-|+.++|...+
T Consensus 425 L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~L 504 (750)
T COG0058 425 LADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLL 504 (750)
T ss_pred HHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHH
Confidence 110 0 0000 00 0011222334444432 3457777788999999999999999988
Q ss_pred HHHHHHhccC-------CCcEEEEEecChhh
Q 007130 586 IAEAIPWMMG-------QDVQLSHVGHWQTR 609 (617)
Q Consensus 586 LIeA~~~L~~-------~dv~LVIvG~G~~~ 609 (617)
.+.-+..+.. ..++++++|...|.
T Consensus 505 nl~~i~~ly~~i~~d~~prv~~iFaGKAhP~ 535 (750)
T COG0058 505 NLLDIERLYRILKEDWVPRVQIIFAGKAHPA 535 (750)
T ss_pred hHhhHHHHHHHHhcCCCCceEEEEeccCCCc
Confidence 7654443322 25888999997653
No 98
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.33 E-value=0.00023 Score=83.20 Aligned_cols=213 Identities=19% Similarity=0.166 Sum_probs=128.3
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhh-cc-------CCCCceEEEEEeCCcccC--CCCCCcccccCCCcccc--------
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRD-NG-------LMQYTRSLLVIHNIAHQG--RGPVSDFVYTDLPGHYL-------- 454 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~-~~-------~~~~iPvV~TiH~~~~qg--~~p~~~~~~~glp~~~~-------- 454 (617)
.+.+||.||-|++++.+.+.+...+ .+ .....-+++|.|++-..+ .||...+..+ +|.++-
T Consensus 300 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~~ 378 (797)
T cd04300 300 DKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINRR 378 (797)
T ss_pred CceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHHH
Confidence 6789999999988876655443221 11 134556899999964433 3554433211 222211
Q ss_pred ----------------ccccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 455 ----------------DLFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 455 ----------------~~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
..+...+...+..++|...++..+..|..||.-+.+-+++..+. .+....+.++.-|.||
T Consensus 379 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~----df~~l~P~kf~n~TNG 454 (797)
T cd04300 379 FLEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFK----DFYELYPEKFNNKTNG 454 (797)
T ss_pred HHHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHH----HHHhhCCCccCCcCCC
Confidence 00001111112246788889999999999998877666653221 1111246788899999
Q ss_pred CcCCCCC----Cccc----cccccCCCC---------ccc-c----ccccCCchHHHHHH----HHHhCCCCCCCCcEEE
Q 007130 519 IDTKEWS----PMYD----IHLTSDGYT---------NYC-L----DTLHTGKPQCKAAL----QREFGLPVRDDVPVIG 572 (617)
Q Consensus 519 ID~~~f~----P~~d----~~l~~~~~~---------~~~-~----e~~~~~k~~~K~~L----r~~lGl~~~~d~~vIl 572 (617)
|....|- |... ..+..++-+ .|. . +.++.-|..+|.+| +++.|+..+++...++
T Consensus 455 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdv 534 (797)
T cd04300 455 ITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDV 534 (797)
T ss_pred CCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEE
Confidence 9998885 2211 111111111 111 1 23444556666665 4567888888999999
Q ss_pred EEeCCccccCHHH-HHHHHHh---ccCC------CcEEEEEecChhhh
Q 007130 573 FIGRLDHQKGVDL-IAEAIPW---MMGQ------DVQLSHVGHWQTRF 610 (617)
Q Consensus 573 fVGRL~~qKGvdl-LIeA~~~---L~~~------dv~LVIvG~G~~~~ 610 (617)
++-|+..+|...+ ++..+.+ |... ++++|++|...|.|
T Consensus 535 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 582 (797)
T cd04300 535 QVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY 582 (797)
T ss_pred EeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc
Confidence 9999999999999 6665444 4332 47899999976544
No 99
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.28 E-value=8.6e-05 Score=79.87 Aligned_cols=161 Identities=22% Similarity=0.339 Sum_probs=91.5
Q ss_pred cEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCC--CCCC-cccccCCCcccccc----ccccCCCCchh
Q 007130 395 LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGR--GPVS-DFVYTDLPGHYLDL----FKLYDPVGGEH 467 (617)
Q Consensus 395 DIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~--~p~~-~~~~~glp~~~~~~----l~~~d~~~g~~ 467 (617)
-|-|.|+|.++....+.+.. ...+-.|||.|.. ..|+ |... ++ +..|...-++. ...| ..
T Consensus 176 vVahFHEW~AGVgL~l~R~r------rl~iaTifTTHAT-LLGRyLCA~~~Df-YNnLd~f~vD~EAGkr~IY-----Hr 242 (692)
T KOG3742|consen 176 VVAHFHEWQAGVGLILCRAR------RLDIATIFTTHAT-LLGRYLCAGNVDF-YNNLDSFDVDKEAGKRQIY-----HR 242 (692)
T ss_pred HHHHHHHHHhccchheehhc------ccceEEEeehhHH-HHHHHHhcccchh-hhchhhcccchhhccchhH-----HH
Confidence 45689999987654444431 2456678999974 2222 2111 11 11111110100 0011 13
Q ss_pred HHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccC
Q 007130 468 FNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHT 547 (617)
Q Consensus 468 ~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~ 547 (617)
+.+++++...|+...|||+-.+-+... +| ...+=.+.|||+++..|..... | .++
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAeH---------lL--kRKPD~itPNGLNV~KFsA~HE----------F--QNL-- 297 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAEH---------LL--KRKPDVITPNGLNVKKFSAVHE----------F--QNL-- 297 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHHH---------HH--hcCCCeeCCCCcceeehhHHHH----------H--HHH--
Confidence 568999999999999999987755432 22 2334467899999998864311 0 111
Q ss_pred CchHHHHHHHH----Hh-C-CCCC-CCCcEEEEEeCCcc-ccCHHHHHHHHHhcc
Q 007130 548 GKPQCKAALQR----EF-G-LPVR-DDVPVIGFIGRLDH-QKGVDLIAEAIPWMM 594 (617)
Q Consensus 548 ~k~~~K~~Lr~----~l-G-l~~~-~d~~vIlfVGRL~~-qKGvdlLIeA~~~L~ 594 (617)
..+.|+.+++ .+ | +..+ +...++..+||... .||.|.+|||+++|-
T Consensus 298 -HA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN 351 (692)
T KOG3742|consen 298 -HAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLN 351 (692)
T ss_pred -HHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhH
Confidence 2333444332 22 1 2111 23456667899984 999999999999874
No 100
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.19 E-value=0.00033 Score=81.78 Aligned_cols=213 Identities=16% Similarity=0.170 Sum_probs=127.0
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhhc-c-------CCCCceEEEEEeCCcccC--CCCCCcccccCCCccc---------
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRDN-G-------LMQYTRSLLVIHNIAHQG--RGPVSDFVYTDLPGHY--------- 453 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~~-~-------~~~~iPvV~TiH~~~~qg--~~p~~~~~~~glp~~~--------- 453 (617)
.+-+||.||-|++++.+.+.+..-+. + ...+.-++||.|++-..| .||...+..+ +|.++
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~-lpr~l~Ii~eIn~~ 391 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKI-LPRHLQIIFEINDY 391 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHH-ccHhhhHHHHHHHH
Confidence 45599999999888776655432211 1 134567999999975443 3554433211 22211
Q ss_pred -cccc-ccc-------------CCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 454 -LDLF-KLY-------------DPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 454 -~~~l-~~~-------------d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
...+ +.+ +...++.++|...++..+..|..||.-+.+-+.+..+. .+.. ..+.++.-|.||
T Consensus 392 fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~-df~~---l~P~kf~niTNG 467 (815)
T PRK14986 392 FLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFA-DFAK---IFPGRFCNVTNG 467 (815)
T ss_pred HHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHH-HHHh---hCCCcccccCCC
Confidence 0000 000 11112356778888999999999998777655443321 0111 145677889999
Q ss_pred CcCCCCC----Cccccc----cccCCCCc---------cc-c----ccccCCchHHHHHH----HHHhCCCCCCCCcEEE
Q 007130 519 IDTKEWS----PMYDIH----LTSDGYTN---------YC-L----DTLHTGKPQCKAAL----QREFGLPVRDDVPVIG 572 (617)
Q Consensus 519 ID~~~f~----P~~d~~----l~~~~~~~---------~~-~----e~~~~~k~~~K~~L----r~~lGl~~~~d~~vIl 572 (617)
|....|- |..... +..+|.++ +. . +.++.-|..+|..| +++.|+..+++...++
T Consensus 468 V~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~ 547 (815)
T PRK14986 468 VTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDV 547 (815)
T ss_pred CChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceee
Confidence 9999885 431111 11111111 10 1 22444455666665 4467888888999999
Q ss_pred EEeCCccccCHHH-HHHHHHhc---cCC------CcEEEEEecChhhh
Q 007130 573 FIGRLDHQKGVDL-IAEAIPWM---MGQ------DVQLSHVGHWQTRF 610 (617)
Q Consensus 573 fVGRL~~qKGvdl-LIeA~~~L---~~~------dv~LVIvG~G~~~~ 610 (617)
|+-|+..+|...+ ++..+.++ ... ++++|++|...+.|
T Consensus 548 qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y 595 (815)
T PRK14986 548 QIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY 595 (815)
T ss_pred eehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc
Confidence 9999999999999 66665544 322 68899999976544
No 101
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.17 E-value=0.00086 Score=63.48 Aligned_cols=52 Identities=37% Similarity=0.606 Sum_probs=43.3
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhcc---CCCcEEEEEecCh
Q 007130 554 AALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMM---GQDVQLSHVGHWQ 607 (617)
Q Consensus 554 ~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~---~~dv~LVIvG~G~ 607 (617)
..++...+.+ .+.++|+|+||+.+.||++.|++|+..+. ..+++|+|+|.++
T Consensus 3 ~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~ 57 (172)
T PF00534_consen 3 DKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE 57 (172)
T ss_dssp HHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC
T ss_pred HHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc
Confidence 3456666664 57889999999999999999999999986 3589999999765
No 102
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=97.12 E-value=0.0078 Score=63.60 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=61.8
Q ss_pred HHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchH
Q 007130 472 AAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQ 551 (617)
Q Consensus 472 k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~ 551 (617)
.++-..||.|++.|.+...+|.+- | ...++.+|+-..+++.+
T Consensus 217 ~~~G~~ad~vm~NssWT~nHI~qi---W--------~~~~~~iVyPPC~~e~l--------------------------- 258 (465)
T KOG1387|consen 217 QSAGSKADIVMTNSSWTNNHIKQI---W--------QSNTCSIVYPPCSTEDL--------------------------- 258 (465)
T ss_pred HhccccceEEEecchhhHHHHHHH---h--------hccceeEEcCCCCHHHH---------------------------
Confidence 344568999999999998888763 1 12456676666655433
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEeCCccccCHH-HHHHHHHhccC------CCcEEEEEecCh
Q 007130 552 CKAALQREFGLPVRDDVPVIGFIGRLDHQKGVD-LIAEAIPWMMG------QDVQLSHVGHWQ 607 (617)
Q Consensus 552 ~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvd-lLIeA~~~L~~------~dv~LVIvG~G~ 607 (617)
....+- .+.+.+.++.+|.+.|+|... +=++|+-.... .+++|+|+|.-.
T Consensus 259 -----ks~~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScR 315 (465)
T KOG1387|consen 259 -----KSKFGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCR 315 (465)
T ss_pred -----HHHhcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccC
Confidence 222222 235678999999999999999 33345443332 378999999854
No 103
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.0061 Score=64.39 Aligned_cols=191 Identities=9% Similarity=0.086 Sum_probs=102.6
Q ss_pred CCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHH
Q 007130 391 GDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNI 470 (617)
Q Consensus 391 ~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l 470 (617)
...+|+|-+++.++...-..+. .+ ..++++++|+.+||..|.- ... ...|....+....+ .+
T Consensus 101 ~~~~~~ilvQNPP~iPtliv~~-~~---~~l~~~KfiIDWHNy~Ysl--~l~--~~~g~~h~lV~l~~----------~~ 162 (444)
T KOG2941|consen 101 LRPPDIILVQNPPSIPTLIVCV-LY---SILTGAKFIIDWHNYGYSL--QLK--LKLGFQHPLVRLVR----------WL 162 (444)
T ss_pred ccCCcEEEEeCCCCCchHHHHH-HH---HHHhcceEEEEehhhHHHH--HHH--hhcCCCCchHHHHH----------HH
Confidence 5679999999876522211111 11 1247899999999965420 000 00111111122222 35
Q ss_pred HHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC-----CcCCC----CCCccccccccCCCCccc
Q 007130 471 FAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG-----IDTKE----WSPMYDIHLTSDGYTNYC 541 (617)
Q Consensus 471 ~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG-----ID~~~----f~P~~d~~l~~~~~~~~~ 541 (617)
++..-+.||.=.||++.|.+++.+. ||+. +..|++.- ++.+. |.+.. .+|..|.
T Consensus 163 E~~fgk~a~~nLcVT~AMr~dL~qn---Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~------~d~~~f~ 225 (444)
T KOG2941|consen 163 EKYFGKLADYNLCVTKAMREDLIQN---WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLA------GDHSPFR 225 (444)
T ss_pred HHHhhcccccchhhHHHHHHHHHHh---cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhc------cccchhh
Confidence 6667788999999999999999873 3331 23333321 11111 21110 0122222
Q ss_pred cccccCCchHHHHHHHHHhC--C-C-CCCCCcEEEEEeCCccccCHHHHHHHHHhc-----cC----CCcEEEEEecCh-
Q 007130 542 LDTLHTGKPQCKAALQREFG--L-P-VRDDVPVIGFIGRLDHQKGVDLIAEAIPWM-----MG----QDVQLSHVGHWQ- 607 (617)
Q Consensus 542 ~e~~~~~k~~~K~~Lr~~lG--l-~-~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L-----~~----~dv~LVIvG~G~- 607 (617)
.. ..+++...+.++.+++. . . ......+++..--.+|...+.+|++|+... .+ ..+-++|-|.||
T Consensus 226 ar-~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl 304 (444)
T KOG2941|consen 226 AR-EPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL 304 (444)
T ss_pred hc-ccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch
Confidence 11 11233333344444432 1 0 112334566666799999999999999833 11 256788889998
Q ss_pred -hhhHHHHHhC
Q 007130 608 -TRFGRDAEEL 617 (617)
Q Consensus 608 -~~~e~~l~~L 617 (617)
..|.+++.++
T Consensus 305 kE~Y~~~I~~~ 315 (444)
T KOG2941|consen 305 KEKYSQEIHEK 315 (444)
T ss_pred hHHHHHHHHHh
Confidence 5788877653
No 104
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.97 E-value=0.0021 Score=74.29 Aligned_cols=211 Identities=21% Similarity=0.210 Sum_probs=105.6
Q ss_pred cEEEEcCcchhHHHHHHHHHhhh-ccC-------CCCceEEEEEeCCcccCC--CCCCcccccCCCccc----------c
Q 007130 395 LVFIANDWHTALLPVYLKAYYRD-NGL-------MQYTRSLLVIHNIAHQGR--GPVSDFVYTDLPGHY----------L 454 (617)
Q Consensus 395 DIIHaHd~~tal~~~~l~~~~~~-~~~-------~~~iPvV~TiH~~~~qg~--~p~~~~~~~glp~~~----------~ 454 (617)
-+||+||-|++++.+.+.+...+ .+. ....-++||.|++-..|. ||...+..+ ||.++ .
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 48999999998877655544332 222 233458999999754443 443322110 11110 0
Q ss_pred c--------------cccccCCCCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCc
Q 007130 455 D--------------LFKLYDPVGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGID 520 (617)
Q Consensus 455 ~--------------~l~~~d~~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID 520 (617)
. .+...+...+..++|...+++.+..|..||.-+.+-+++..+ ..+....+.++.-|.|||.
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f----~~f~~l~P~kf~nvTNGVh 370 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVF----KDFYELWPEKFGNVTNGVH 370 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTT----HHHHHHSGGGEEE----B-
T ss_pred HHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHh----hhhhhcCCceeeccccCcc
Confidence 0 001111111235678888999999999999987766654322 1111224678999999999
Q ss_pred CCCCC----Ccccc----ccccCCCCc---------cccc-----cccCCchHHHHHH----HHHhCCCCCCCCcEEEEE
Q 007130 521 TKEWS----PMYDI----HLTSDGYTN---------YCLD-----TLHTGKPQCKAAL----QREFGLPVRDDVPVIGFI 574 (617)
Q Consensus 521 ~~~f~----P~~d~----~l~~~~~~~---------~~~e-----~~~~~k~~~K~~L----r~~lGl~~~~d~~vIlfV 574 (617)
...|- |.... .+..++.++ +..+ .++.-|..+|..+ +++.|+..+++...++++
T Consensus 371 ~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~ 450 (713)
T PF00343_consen 371 PRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQA 450 (713)
T ss_dssp TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEE
T ss_pred CcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhh
Confidence 99994 32110 111111111 1111 0111122333333 445677667788899999
Q ss_pred eCCccccCHHHH-H---HHHHhccC------CCcEEEEEecChhhh
Q 007130 575 GRLDHQKGVDLI-A---EAIPWMMG------QDVQLSHVGHWQTRF 610 (617)
Q Consensus 575 GRL~~qKGvdlL-I---eA~~~L~~------~dv~LVIvG~G~~~~ 610 (617)
-|+..+|...+. + .-+.+|.. .++++|++|...|.|
T Consensus 451 rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d 496 (713)
T PF00343_consen 451 RRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGD 496 (713)
T ss_dssp S-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-
T ss_pred hhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCc
Confidence 999999999883 3 33334432 278999999986544
No 105
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.97 E-value=0.00035 Score=81.40 Aligned_cols=213 Identities=19% Similarity=0.150 Sum_probs=127.9
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhh-cc-------CCCCceEEEEEeCCcccC--CCCCCcccccCCCcccc--------
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRD-NG-------LMQYTRSLLVIHNIAHQG--RGPVSDFVYTDLPGHYL-------- 454 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~-~~-------~~~~iPvV~TiH~~~~qg--~~p~~~~~~~glp~~~~-------- 454 (617)
.+.+||+||-|++++.+.+.+...+ .+ .....-++||.|++-..+ .||...+..+ +|.++.
T Consensus 297 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~-Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKL-LPRHLEIIYEINRR 375 (794)
T ss_pred cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHH-HhHHHHHHHHHhHH
Confidence 6789999999988876655443221 11 134556899999964433 3555433211 222111
Q ss_pred --ccccccCC--------------CCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecC
Q 007130 455 --DLFKLYDP--------------VGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNG 518 (617)
Q Consensus 455 --~~l~~~d~--------------~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNG 518 (617)
...+...| ..+..++|...++..+..|..||.-+.+-+++..+. .+....+.++.-|.||
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~----df~~l~P~kf~n~TNG 451 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLK----DFYELYPEKFNNKTNG 451 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHH----HHHhhCCCccCCcCCC
Confidence 00000001 112257788889999999999998877666643221 0111246788899999
Q ss_pred CcCCCCCCccccccc--------cCCCC---------cccc-----ccccCCchHHHHHH----HHHhCCCCCCCCcEEE
Q 007130 519 IDTKEWSPMYDIHLT--------SDGYT---------NYCL-----DTLHTGKPQCKAAL----QREFGLPVRDDVPVIG 572 (617)
Q Consensus 519 ID~~~f~P~~d~~l~--------~~~~~---------~~~~-----e~~~~~k~~~K~~L----r~~lGl~~~~d~~vIl 572 (617)
|....|--...+.+. .+|-+ .|.. +.++.-|..+|.+| +++.|+..+++...++
T Consensus 452 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 531 (794)
T TIGR02093 452 ITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDV 531 (794)
T ss_pred CCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchh
Confidence 999888521111111 01111 1211 33444455666665 4567888788899999
Q ss_pred EEeCCccccCHHH-HHHHHHhc---cCC------CcEEEEEecChhhh
Q 007130 573 FIGRLDHQKGVDL-IAEAIPWM---MGQ------DVQLSHVGHWQTRF 610 (617)
Q Consensus 573 fVGRL~~qKGvdl-LIeA~~~L---~~~------dv~LVIvG~G~~~~ 610 (617)
++-|+..+|...+ ++..+.++ ... +.++|++|...|.|
T Consensus 532 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 579 (794)
T TIGR02093 532 QVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY 579 (794)
T ss_pred hheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc
Confidence 9999999999999 66665544 332 66899999976544
No 106
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=96.96 E-value=0.006 Score=68.12 Aligned_cols=162 Identities=14% Similarity=0.063 Sum_probs=101.5
Q ss_pred cEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHHH
Q 007130 395 LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAAG 474 (617)
Q Consensus 395 DIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~~ 474 (617)
|+|=+||+|..++|.+++.. ....++-|-+|-. ||..++ +..+-+. .-+..+
T Consensus 125 D~VWVHDYhL~llp~~LR~~------~~~~~IgFFlHiP-----FPs~ei---------fr~LP~r--------~eil~g 176 (474)
T PRK10117 125 DIIWIHDYHLLPFASELRKR------GVNNRIGFFLHIP-----FPTPEI---------FNALPPH--------DELLEQ 176 (474)
T ss_pred CEEEEeccHhhHHHHHHHHh------CCCCcEEEEEeCC-----CCChHH---------HhhCCCh--------HHHHHH
Confidence 79999999999999998864 2467889999973 444322 1111111 122346
Q ss_pred HhhcCeeEEeCHHHHHHHHhh---hcCCcc-c-cc--cccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccC
Q 007130 475 LKTADRVVTVSRGYSWELKTA---EGGWGL-H-NI--INEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHT 547 (617)
Q Consensus 475 l~~AD~VIaVS~~~a~~l~~~---~~G~gL-~-~~--l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~ 547 (617)
+-.||.|-.-++.+++...+. ..|... . .. ..-..-++.+.|=|||++.|.-....
T Consensus 177 lL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~----------------- 239 (474)
T PRK10117 177 LCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG----------------- 239 (474)
T ss_pred HHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc-----------------
Confidence 667888888887777665431 111100 0 00 00123357788899998877432110
Q ss_pred CchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC------CCcEEEEEecC
Q 007130 548 GKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHW 606 (617)
Q Consensus 548 ~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G 606 (617)
......+.+++.++ ++.+|+-|.||++-||+..=++|+..+++ .++.||-+...
T Consensus 240 ~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 240 PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 00111234666664 46789999999999999999999999876 26778877653
No 107
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.84 E-value=0.006 Score=72.98 Aligned_cols=174 Identities=14% Similarity=0.167 Sum_probs=107.9
Q ss_pred ccccccCCCC--cEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCC
Q 007130 385 CGGVCYGDGN--LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDP 462 (617)
Q Consensus 385 ~~~v~~~~~p--DIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~ 462 (617)
+.+++...++ |+|=+||+|..++|.+++.. ....++-|.+|-. ||..++ +..+-+.
T Consensus 191 A~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~------~~~~~IgfFlHiP-----FPs~ei---------fr~LP~r-- 248 (854)
T PLN02205 191 ADRIMEVINPEDDFVWIHDYHLMVLPTFLRKR------FNRVKLGFFLHSP-----FPSSEI---------YKTLPIR-- 248 (854)
T ss_pred HHHHHHHhCCCCCEEEEeCchhhHHHHHHHhh------CCCCcEEEEecCC-----CCChHH---------HhhCCcH--
Confidence 3344443344 89999999999999998764 3567899999983 454322 1111111
Q ss_pred CCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhh---hcCCccc------cc-cccCCCcEEEEecCCcCCCCCCcccccc
Q 007130 463 VGGEHFNIFAAGLKTADRVVTVSRGYSWELKTA---EGGWGLH------NI-INEVDWKLSGIVNGIDTKEWSPMYDIHL 532 (617)
Q Consensus 463 ~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~---~~G~gL~------~~-l~~~~~kI~vIpNGID~~~f~P~~d~~l 532 (617)
.-+-.++-.||.|-.-...|++...+. ..|.... .+ ..-..-++.+.|=|||.+.|.-....
T Consensus 249 ------~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-- 320 (854)
T PLN02205 249 ------EELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-- 320 (854)
T ss_pred ------HHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC--
Confidence 123356778999888888888776541 1111000 00 00123356788889998777432110
Q ss_pred ccCCCCccccccccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC------CcEEEEEec
Q 007130 533 TSDGYTNYCLDTLHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ------DVQLSHVGH 605 (617)
Q Consensus 533 ~~~~~~~~~~e~~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~------dv~LVIvG~ 605 (617)
....+..+.++++++- +++.+|+-|.||++-||+..=+.|+.++++. ++.||-+..
T Consensus 321 --------------~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ 382 (854)
T PLN02205 321 --------------PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIAN 382 (854)
T ss_pred --------------hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEec
Confidence 0011122346666652 2467999999999999999999999998752 567777765
No 108
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.011 Score=66.07 Aligned_cols=166 Identities=20% Similarity=0.229 Sum_probs=104.2
Q ss_pred CcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHHH
Q 007130 394 NLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFAA 473 (617)
Q Consensus 394 pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k~ 473 (617)
-|+|=+||+|..++|.+++.. ....++.|.+|-. ||..+ ++.++-++ .-...
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~------~~~~~IgfFlHiP-----fPssE---------vfr~lP~r--------~eIl~ 199 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRER------IPDAKIGFFLHIP-----FPSSE---------VFRCLPWR--------EEILE 199 (486)
T ss_pred CCEEEEEechhhhhHHHHHHh------CCCceEEEEEeCC-----CCCHH---------HHhhCchH--------HHHHH
Confidence 499999999999999999864 3456899999983 45432 22222221 11234
Q ss_pred HHhhcCeeEEeCHHHHHHHHhh---hcCC-ccccc-cc---cCCCcEEEEecCCcCCCCCCccccccccCCCCccccccc
Q 007130 474 GLKTADRVVTVSRGYSWELKTA---EGGW-GLHNI-IN---EVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTL 545 (617)
Q Consensus 474 ~l~~AD~VIaVS~~~a~~l~~~---~~G~-gL~~~-l~---~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~ 545 (617)
++-.||.|-.-.+.++...... ..|. +...+ .+ -...++..+|=|||+..|.-.... .. .
T Consensus 200 gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-----------~~-v 267 (486)
T COG0380 200 GLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-----------PS-V 267 (486)
T ss_pred HhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-----------Cc-h
Confidence 6677888888888777765431 1110 00000 00 123567788889998877432110 00 0
Q ss_pred cCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC------CCcEEEEEecCh
Q 007130 546 HTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHWQ 607 (617)
Q Consensus 546 ~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G~ 607 (617)
. .--+.+++.++ .++.+|+.+.||++-||+..=+.|+.+++. .++.||-++...
T Consensus 268 ---~-~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pS 327 (486)
T COG0380 268 ---Q-EKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPS 327 (486)
T ss_pred ---h-hHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCC
Confidence 0 11233555554 237899999999999999999999999985 267888888754
No 109
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.57 E-value=0.00058 Score=79.59 Aligned_cols=213 Identities=16% Similarity=0.104 Sum_probs=125.4
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhh-cc-------CCCCceEEEEEeCCcccC--CCCCCcccccCCCcccc--------
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRD-NG-------LMQYTRSLLVIHNIAHQG--RGPVSDFVYTDLPGHYL-------- 454 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~-~~-------~~~~iPvV~TiH~~~~qg--~~p~~~~~~~glp~~~~-------- 454 (617)
.+.+||+||-|++++.+.+.+...+ .+ .....-++||.|++-..+ .||...+..+ +|.++-
T Consensus 302 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~-Lpr~~~ii~~in~~ 380 (798)
T PRK14985 302 DYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSL-LPRHMQIIKEINTR 380 (798)
T ss_pred CCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHH-hHHHHHHHHHHHHH
Confidence 6779999999988876655443222 11 134557899999964433 3554433211 222111
Q ss_pred --ccc-cccC-C---------CCchhHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcC
Q 007130 455 --DLF-KLYD-P---------VGGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDT 521 (617)
Q Consensus 455 --~~l-~~~d-~---------~~g~~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~ 521 (617)
... ..+. . ...+.++|...++..+..|..||.-+.+-+.+..+. ++..+ .+.++.-|.|||..
T Consensus 381 fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~-df~~l---~p~kf~nvTNGVt~ 456 (798)
T PRK14985 381 FKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFP-EYHQL---WPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhh-hhHhh---CCCccCCcCCCcCc
Confidence 000 0010 0 001246777788889999999998776554543321 01111 36788899999999
Q ss_pred CCC----CCccccc----cccCCCC---------cccc-cc----ccCCchHHHHHH----HHHhCCCCCCCCcEEEEEe
Q 007130 522 KEW----SPMYDIH----LTSDGYT---------NYCL-DT----LHTGKPQCKAAL----QREFGLPVRDDVPVIGFIG 575 (617)
Q Consensus 522 ~~f----~P~~d~~----l~~~~~~---------~~~~-e~----~~~~k~~~K~~L----r~~lGl~~~~d~~vIlfVG 575 (617)
..| +|..... +..+|-+ .|.. +. ++.-|..+|+.| +++.|+..+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 999 4431111 1111111 1211 11 244455556655 4567888788899999999
Q ss_pred CCccccCHHH-HHHHHHhcc---CC------CcEEEEEecChhhh
Q 007130 576 RLDHQKGVDL-IAEAIPWMM---GQ------DVQLSHVGHWQTRF 610 (617)
Q Consensus 576 RL~~qKGvdl-LIeA~~~L~---~~------dv~LVIvG~G~~~~ 610 (617)
|+..+|...+ ++..+.++. .. ++++|++|...+.|
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 581 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY 581 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc
Confidence 9999999999 766655443 21 58899999976544
No 110
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=96.34 E-value=0.015 Score=65.28 Aligned_cols=166 Identities=19% Similarity=0.193 Sum_probs=89.2
Q ss_pred CCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHHHHH
Q 007130 393 GNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFNIFA 472 (617)
Q Consensus 393 ~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~l~k 472 (617)
.-|+|=+||+|..++|.+++.. ....++.+.+|.. ||..++ +.++-+ . .-+-
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~------~~~~~IgfFlHiP-----FPs~e~---------fr~lP~-------r-~eiL 192 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRER------GPDARIGFFLHIP-----FPSSEI---------FRCLPW-------R-EEIL 192 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHT------T--SEEEEEE-S---------HHH---------HTTSTT-------H-HHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhh------cCCceEeeEEecC-----CCCHHH---------HhhCCc-------H-HHHH
Confidence 4479999999999999998863 3568899999983 443322 111111 1 1233
Q ss_pred HHHhhcCeeEEeCHHHHHHHHhh---hcCCcccc-----ccccCCCcEEEEecCCcCCCCCCccccccccCCCCcccccc
Q 007130 473 AGLKTADRVVTVSRGYSWELKTA---EGGWGLHN-----IINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDT 544 (617)
Q Consensus 473 ~~l~~AD~VIaVS~~~a~~l~~~---~~G~gL~~-----~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~ 544 (617)
.++-.||.|-.-+..+++...+. ..|..... ..+-..-++.+.|=|||++.|..... + +
T Consensus 193 ~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~-----------~-~- 259 (474)
T PF00982_consen 193 RGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLAR-----------S-P- 259 (474)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-------------S-
T ss_pred HHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhcc-----------C-h-
Confidence 57778999999999888876432 11110000 00112334677788888876642110 0 0
Q ss_pred ccCCchHHHHHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC------CCcEEEEEecC
Q 007130 545 LHTGKPQCKAALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG------QDVQLSHVGHW 606 (617)
Q Consensus 545 ~~~~k~~~K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~------~dv~LVIvG~G 606 (617)
.-.+..+.++++++ .+.++|+-|.|+++-||+..=+.|+..+++ .++.|+-++..
T Consensus 260 ---~v~~~~~~l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~p 320 (474)
T PF00982_consen 260 ---EVQERAEELREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVP 320 (474)
T ss_dssp ------HHHHHHHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B
T ss_pred ---HHHHHHHHHHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeec
Confidence 00122345677775 124799999999999999999999998875 36888777763
No 111
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=96.32 E-value=0.004 Score=68.88 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=55.6
Q ss_pred CCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccc-cccccCCCCchhHH
Q 007130 391 GDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLD-LFKLYDPVGGEHFN 469 (617)
Q Consensus 391 ~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~-~l~~~d~~~g~~~~ 469 (617)
+..||+||.|..-+++++.++... .++|.++|-|.+.-+. ++. .++.+.-+. .+.+- ..+.
T Consensus 399 ~~~PdlI~GnYsDgnlvA~LLs~~-------lgv~~~~iaHsLek~K-y~~-----s~~~w~e~e~~Yhfs-----~qft 460 (550)
T PF00862_consen 399 QGKPDLIIGNYSDGNLVASLLSRK-------LGVTQCFIAHSLEKTK-YED-----SDLYWKEIEEKYHFS-----CQFT 460 (550)
T ss_dssp TS--SEEEEEHHHHHHHHHHHHHH-------HT-EEEEE-SS-HHHH-HHT-----TTTTSHHHHHHH-HH-----HHHH
T ss_pred CCCCcEEEeccCcchHHHHHHHhh-------cCCceehhhhcccccc-ccc-----cCCCHHHHHhhccch-----hhhh
Confidence 457999999987778888776642 5899999999974211 111 111111000 01110 1234
Q ss_pred HHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccc---cccccCCCcEEEEecCCcCCCCCCccc
Q 007130 470 IFAAGLKTADRVVTVSRGYSWELKTAEGGWGLH---NIINEVDWKLSGIVNGIDTKEWSPMYD 529 (617)
Q Consensus 470 l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~---~~l~~~~~kI~vIpNGID~~~f~P~~d 529 (617)
....++++||.|||-+. +++....--+|-. ..+..+. +.-+.||||. |+|.+.
T Consensus 461 Ad~iamn~adfIItST~---QEI~g~~~~~gqyes~~~ftlpg--Lyrvv~Gi~v--FdPkfN 516 (550)
T PF00862_consen 461 ADLIAMNAADFIITSTY---QEIAGQKDTVGQYESHKAFTLPG--LYRVVNGIDV--FDPKFN 516 (550)
T ss_dssp HHHHHHHHSSEEEESSH---HHHHB-SSSBHTTGGGSSEEETT--TEEEEES--T--T-TTEE
T ss_pred HHHHHhhcCCEEEEcch---HhhcCCccccCCccchhhcchHh--HHhhhccccc--cCCccc
Confidence 45578999998888774 5554321111111 1111122 4667788874 777644
No 112
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.27 E-value=0.048 Score=54.79 Aligned_cols=90 Identities=38% Similarity=0.526 Sum_probs=64.6
Q ss_pred hcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHHHHH
Q 007130 477 TADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAAL 556 (617)
Q Consensus 477 ~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K~~L 556 (617)
.++.+++.+......+... + ...++.+++||+|...+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~----------------------------- 189 (381)
T COG0438 150 LADRVIAVSPALKELLEAL-G----------VPNKIVVIPNGIDTEKFAPA----------------------------- 189 (381)
T ss_pred cccEEEECCHHHHHHHHHh-C----------CCCCceEecCCcCHHHcCcc-----------------------------
Confidence 4788999998764444321 1 23378999999998877541
Q ss_pred HHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccCC--CcEEEEEecChh
Q 007130 557 QREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQ--DVQLSHVGHWQT 608 (617)
Q Consensus 557 r~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~~--dv~LVIvG~G~~ 608 (617)
...+.......+++|+||+.+.||++.+++|+..+... +++++++|.|+.
T Consensus 190 --~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~ 241 (381)
T COG0438 190 --RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPE 241 (381)
T ss_pred --ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCc
Confidence 00111011136899999999999999999999998764 389999999975
No 113
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=95.77 E-value=0.02 Score=59.53 Aligned_cols=42 Identities=21% Similarity=0.394 Sum_probs=36.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|++|+-..+|| ..||+..-+.+|.++|-+.-..|..+++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~ 42 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGAN 42 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCC
Confidence 8999999999999 68999999999999998766666666655
No 114
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=95.66 E-value=0.033 Score=54.10 Aligned_cols=41 Identities=27% Similarity=0.280 Sum_probs=29.6
Q ss_pred HHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCC
Q 007130 472 AAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEW 524 (617)
Q Consensus 472 k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f 524 (617)
...+..||..|+++.+-+...= .. -..||.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~fP---------~~---~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQFP---------AE---FRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhCC---------HH---HHcCcEEeecccchhhc
Confidence 3567789999999976443221 11 25799999999999765
No 115
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=95.48 E-value=0.31 Score=52.84 Aligned_cols=118 Identities=20% Similarity=0.125 Sum_probs=63.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCe-EEEEecCCCCCCCCCCCCcceeEeeccccceEEEEEeeeCCcE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHR-VMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVD 356 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~Ghe-V~Vv~p~y~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~gV~ 356 (617)
|+|++... .+||==.....|+++|.++|++ |.++...+. .+... ....++.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~e~~l--------------------~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDG--LEAFL--------------------VKQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEeccccc--ceeee--------------------ccccCce
Confidence 45555553 4677777789999999999996 444432221 11100 0112455
Q ss_pred EEEecCccccccCCCcCCCCCCcccccc-----ccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEe
Q 007130 357 FVFLDSPLFRHLGNNIYGGGREIPWYVP-----CGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIH 431 (617)
Q Consensus 357 v~~i~~p~~~~~~~~iy~~~~~~~~~l~-----~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH 431 (617)
++.|+...++.. ..+. ....+|.+. +..+++..+||+|..-.+..+.-+.++.. ..++|++.+-.
T Consensus 53 ~~~I~~~~~~~~--~~~~-~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~-------~~~iPv~ihEq 122 (357)
T COG0707 53 FELIPSGGLRRK--GSLK-LLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAK-------LLGIPVIIHEQ 122 (357)
T ss_pred EEEEeccccccc--CcHH-HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHH-------hCCCCEEEEec
Confidence 666654333211 1111 000112221 23466788999998755444444444433 36799998776
Q ss_pred CC
Q 007130 432 NI 433 (617)
Q Consensus 432 ~~ 433 (617)
|.
T Consensus 123 n~ 124 (357)
T COG0707 123 NA 124 (357)
T ss_pred CC
Confidence 63
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=95.41 E-value=0.1 Score=58.43 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=68.1
Q ss_pred HHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHHH
Q 007130 474 GLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCK 553 (617)
Q Consensus 474 ~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~K 553 (617)
....+|++++-|..++.......- .|+ ...+.+.+.+||.+.+.+. .|.. +...+
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~~~------~L~--~~d~~~~y~ei~~s~~~~~-----------~~~~------~~~~~ 260 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKATFV------SLS--NSDITSTYPEIDGSWFTYG-----------QYES------HLELR 260 (495)
T ss_pred hhhccceEecchhhhhhhhhhhhh------hcC--CCCcceeeccccchhcccc-----------cccc------chhcc
Confidence 345689999999887776654311 122 2338899999998777652 1111 00111
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeCCccccCHHHHHHHHHhccC-------CCcEEEEEec
Q 007130 554 AALQREFGLPVRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMG-------QDVQLSHVGH 605 (617)
Q Consensus 554 ~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGvdlLIeA~~~L~~-------~dv~LVIvG~ 605 (617)
...|.+.++. ..+.+++-+-|+.|.||++++++|+..+.. .+.+++++|+
T Consensus 261 ~~~r~~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~ 317 (495)
T KOG0853|consen 261 LPVRLYRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGS 317 (495)
T ss_pred cccceeeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecC
Confidence 1123334443 335678889999999999999999988764 2578999994
No 117
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.31 E-value=0.051 Score=58.32 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=30.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+=... +| --.+...+.+.|.++||+|.|.+..+..
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~ 39 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDE 39 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccch
Confidence 899986653 23 2457789999999999999999987754
No 118
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=94.84 E-value=0.018 Score=52.08 Aligned_cols=42 Identities=26% Similarity=0.548 Sum_probs=33.0
Q ss_pred CcEEEEEeCCccccCHHHHHH-HHHhccC--CCcEEEEEecChhh
Q 007130 568 VPVIGFIGRLDHQKGVDLIAE-AIPWMMG--QDVQLSHVGHWQTR 609 (617)
Q Consensus 568 ~~vIlfVGRL~~qKGvdlLIe-A~~~L~~--~dv~LVIvG~G~~~ 609 (617)
-++|+++|++.+.||++.|++ |++.+.+ .+++|+|+|.++++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~ 46 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDE 46 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-H
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHH
Confidence 468999999999999999999 9988865 48999999998764
No 119
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=86.23 E-value=4.1 Score=43.16 Aligned_cols=41 Identities=22% Similarity=0.363 Sum_probs=30.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYA 325 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~~~ 325 (617)
||||+=... +|. ..+...+...|.++||+|.+.|..++...
T Consensus 1 mkVwiDI~n-~~h------vhfFk~lI~elekkG~ev~iT~rd~~~v~ 41 (346)
T COG1817 1 MKVWIDIGN-PPH------VHFFKNLIWELEKKGHEVLITCRDFGVVT 41 (346)
T ss_pred CeEEEEcCC-cch------hhHHHHHHHHHHhCCeEEEEEEeecCcHH
Confidence 677764432 343 35788999999999999999998876543
No 120
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=86.06 E-value=0.8 Score=39.51 Aligned_cols=72 Identities=11% Similarity=0.204 Sum_probs=40.6
Q ss_pred eeCCcEEEEecCccccccC--CCcCCCCCCccccccccccccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEE
Q 007130 351 YIDGVDFVFLDSPLFRHLG--NNIYGGGREIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLL 428 (617)
Q Consensus 351 ~~~gV~v~~i~~p~~~~~~--~~iy~~~~~~~~~l~~~~v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~ 428 (617)
.-+|+++|.++...+.... +.+++. +++ .+.++.+++.||||.|...+.++--.+.- ++ ..+.+.|+
T Consensus 12 ltngLKVYYlP~~~~~~~~t~Pt~~~~---~pl---~R~IlirE~I~IVHgH~a~S~l~hE~i~h-A~----~mGlktVf 80 (90)
T PF08288_consen 12 LTNGLKVYYLPLKVFYNQCTLPTLFGS---FPL---LRNILIRERIDIVHGHQAFSTLCHEAILH-AR----TMGLKTVF 80 (90)
T ss_pred cCCCeEEEeecchhhhcCcchHHHHHh---hHH---HHHHHHHcCeeEEEeehhhhHHHHHHHHH-HH----hCCCcEEe
Confidence 3467888888654332210 011111 111 13345577899999998665554322211 11 36899999
Q ss_pred EEeCC
Q 007130 429 VIHNI 433 (617)
Q Consensus 429 TiH~~ 433 (617)
|-|++
T Consensus 81 TDHSL 85 (90)
T PF08288_consen 81 TDHSL 85 (90)
T ss_pred ecccc
Confidence 99995
No 121
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=81.52 E-value=1.9 Score=42.91 Aligned_cols=39 Identities=36% Similarity=0.444 Sum_probs=29.2
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+....= + -+.-+..|.++|.+.||+|.|++|....
T Consensus 1 M~ILlTNDDG-----i--~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDG-----I--DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS------T--TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCC-----C--CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 9999988642 2 2345788999998889999999998654
No 122
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=78.10 E-value=3.3 Score=44.78 Aligned_cols=38 Identities=32% Similarity=0.323 Sum_probs=29.1
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
|||++++. | .-|=-.-+..|+++|+++||+|+++++..
T Consensus 1 mrIl~~~~---p---~~GHv~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 1 MRVLITTI---G---SRGDVQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred CeEEEEeC---C---CcchHHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 89999984 3 22333345699999999999999998753
No 123
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=75.85 E-value=13 Score=40.18 Aligned_cols=88 Identities=15% Similarity=-0.013 Sum_probs=45.3
Q ss_pred ccCCCCcEEEEc-CcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchh
Q 007130 389 CYGDGNLVFIAN-DWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEH 467 (617)
Q Consensus 389 ~~~~~pDIIHaH-d~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~ 467 (617)
+...+||+|-++ |-.++++++++.. ..++| |.++|+- .-.. +.. .|.++.
T Consensus 63 ~~~~~Pd~Vlv~GD~~~~la~alaA~-------~~~ip-v~HieaG----lRs~-d~~-~g~~de--------------- 113 (346)
T PF02350_consen 63 LEREKPDAVLVLGDRNEALAAALAAF-------YLNIP-VAHIEAG----LRSG-DRT-EGMPDE--------------- 113 (346)
T ss_dssp HHHHT-SEEEEETTSHHHHHHHHHHH-------HTT-E-EEEES---------S--TT-SSTTHH---------------
T ss_pred HHhcCCCEEEEEcCCchHHHHHHHHH-------HhCCC-EEEecCC----CCcc-ccC-CCCchh---------------
Confidence 345689999888 4555565555443 26899 6667651 0000 000 122221
Q ss_pred HHHHHHH-HhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 468 FNIFAAG-LKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 468 ~~l~k~~-l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
..|.+ -+.|+.-.+.++.+++.+.+. | +++++|.++-|
T Consensus 114 --~~R~~i~~la~lhf~~t~~~~~~L~~~--G--------~~~~rI~~vG~ 152 (346)
T PF02350_consen 114 --INRHAIDKLAHLHFAPTEEARERLLQE--G--------EPPERIFVVGN 152 (346)
T ss_dssp --HHHHHHHHH-SEEEESSHHHHHHHHHT--T----------GGGEEE---
T ss_pred --hhhhhhhhhhhhhccCCHHHHHHHHhc--C--------CCCCeEEEECh
Confidence 22223 346899999999998888762 2 26789998877
No 124
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=74.77 E-value=3.8 Score=37.47 Aligned_cols=40 Identities=30% Similarity=0.380 Sum_probs=25.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||+++.. |+....=-.+....|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 43222223456788999999999999999876
No 125
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=71.07 E-value=33 Score=37.16 Aligned_cols=90 Identities=12% Similarity=0.001 Sum_probs=49.8
Q ss_pred cccCCCCcEEEEcC-cchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCch
Q 007130 388 VCYGDGNLVFIAND-WHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGE 466 (617)
Q Consensus 388 v~~~~~pDIIHaHd-~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~ 466 (617)
++...+||+|-+|. -.+.+++.++.. ..++|++ ++|+-.. .. +.+++.
T Consensus 88 ~~~~~~Pd~vlv~GD~~~~la~alaA~-------~~~IPv~-HveaG~r----s~------~~~eE~------------- 136 (365)
T TIGR03568 88 AFERLKPDLVVVLGDRFEMLAAAIAAA-------LLNIPIA-HIHGGEV----TE------GAIDES------------- 136 (365)
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHH-------HhCCcEE-EEECCcc----CC------CCchHH-------------
Confidence 45677899988885 555555554443 2688987 3454211 00 111110
Q ss_pred hHHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec-CCcC
Q 007130 467 HFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN-GIDT 521 (617)
Q Consensus 467 ~~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN-GID~ 521 (617)
.+ +..-+.|+...+..+..++.+.+. | .++++|.++-| ++|.
T Consensus 137 -~r--~~i~~la~l~f~~t~~~~~~L~~e--g--------~~~~~i~~tG~~~iD~ 179 (365)
T TIGR03568 137 -IR--HAITKLSHLHFVATEEYRQRVIQM--G--------EDPDRVFNVGSPGLDN 179 (365)
T ss_pred -HH--HHHHHHHhhccCCCHHHHHHHHHc--C--------CCCCcEEEECCcHHHH
Confidence 00 112245677777888777777642 2 14677887776 5664
No 126
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=70.38 E-value=6.3 Score=35.71 Aligned_cols=23 Identities=43% Similarity=0.537 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHCCCeEEEEecC
Q 007130 298 DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 298 ~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.=...|+++|.++||+|.+.++.
T Consensus 13 ~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 13 YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp HHHHHHHHHHHHTT-EEEEEETG
T ss_pred HHHHHHHHHHhccCCeEEEeecc
Confidence 33578999999999999988865
No 127
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=68.92 E-value=12 Score=39.55 Aligned_cols=28 Identities=25% Similarity=0.235 Sum_probs=23.9
Q ss_pred CCC-cHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 292 KTG-GLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 292 ~~G-Glg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
..| |=-..+..++++|.+ ||+|.+++..
T Consensus 8 g~G~GH~~r~~ala~~L~~-g~ev~~~~~~ 36 (321)
T TIGR00661 8 GEGFGHTTRSVAIGEALKN-DYEVSYIASG 36 (321)
T ss_pred ccCccHHHHHHHHHHHHhC-CCeEEEEEcC
Confidence 467 888889999999999 9999999744
No 128
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=68.44 E-value=10 Score=35.00 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=32.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCe-EEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHR-VMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~Ghe-V~Vv~p~ 320 (617)
|||+++... +|| .+-.++-..++|+++.+.||+ |.|+...
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 41 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFFYQ 41 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEeh
Confidence 899988864 685 566778999999999999998 5777644
No 129
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=67.86 E-value=7.6 Score=43.27 Aligned_cols=46 Identities=28% Similarity=0.472 Sum_probs=36.9
Q ss_pred CCcCCCCCCCCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 264 TEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 264 ~~~~~~~p~~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.-+.+.|...++.+|||++ +||.|-+-..|++.|.++||+|.++..
T Consensus 107 ~~~~~~~~~~~~~~mkILV----------TGatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 107 GRTGRVPVGIGRKRLRIVV----------TGGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred cccCCCCcccccCCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 3456777777788899886 467777778899999999999998864
No 130
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=67.77 E-value=58 Score=31.65 Aligned_cols=81 Identities=23% Similarity=0.178 Sum_probs=44.9
Q ss_pred cCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchhHH
Q 007130 390 YGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEHFN 469 (617)
Q Consensus 390 ~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~~~ 469 (617)
....+|+|.+.+... ++.+ +.+.. .+.++|.++-+|.- |-.+|...-..-++ . | | ..+
T Consensus 56 ~~~~~dll~aTsmld-La~l--~gL~p---~l~~~p~ilYFHEN--Ql~YP~~~~~~rd~--------~-~----~-~~n 113 (168)
T PF12038_consen 56 LSHSYDLLFATSMLD-LATL--RGLRP---DLANVPKILYFHEN--QLAYPVSPGQERDF--------Q-Y----G-MNN 113 (168)
T ss_pred cccCCCEEEeecccc-HHHH--Hhhcc---CCCCCCEEEEEecC--cccCCCCCCccccc--------c-H----H-HHH
Confidence 344579999998543 2221 11121 25789999999973 43455432110000 0 0 0 233
Q ss_pred HHHHHHhhcCeeEEeCHHHHHHHHh
Q 007130 470 IFAAGLKTADRVVTVSRGYSWELKT 494 (617)
Q Consensus 470 l~k~~l~~AD~VIaVS~~~a~~l~~ 494 (617)
+. ..-.||+|+..|..-.+...+
T Consensus 114 i~--saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 114 IY--SALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HH--HHHhceeeeecchhhHHHHHH
Confidence 32 334799999999887766553
No 131
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=66.21 E-value=8.8 Score=43.70 Aligned_cols=39 Identities=28% Similarity=0.336 Sum_probs=29.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
-||+.+.+.+ .+-=-.++..++++|+++||+|+|+.|..
T Consensus 21 ~kIl~~~P~~-----~~SH~~~~~~l~~~La~rGH~VTvi~p~~ 59 (507)
T PHA03392 21 ARILAVFPTP-----AYSHHSVFKVYVEALAERGHNVTVIKPTL 59 (507)
T ss_pred ccEEEEcCCC-----CCcHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 4687775421 23345677899999999999999998853
No 132
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=62.59 E-value=10 Score=43.31 Aligned_cols=45 Identities=9% Similarity=-0.088 Sum_probs=36.5
Q ss_pred cEEEEEe--CCccccCHHHHHHHHHhccC--CCcEEEEEecChh-hhHHHH
Q 007130 569 PVIGFIG--RLDHQKGVDLIAEAIPWMMG--QDVQLSHVGHWQT-RFGRDA 614 (617)
Q Consensus 569 ~vIlfVG--RL~~qKGvdlLIeA~~~L~~--~dv~LVIvG~G~~-~~e~~l 614 (617)
..+++++ || ++|-++.+|+|+..+.. .+++|.+.|.|.. ++.+.+
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l 369 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLL 369 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHH
Confidence 4688888 99 99999999999999865 5999999999863 344444
No 133
>PLN00016 RNA-binding protein; Provisional
Probab=61.53 E-value=8.6 Score=41.63 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=31.5
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
+||||+++. ..||.|..-..|++.|.+.||+|++++...
T Consensus 52 ~~~VLVt~~------~~GatG~iG~~lv~~L~~~G~~V~~l~R~~ 90 (378)
T PLN00016 52 KKKVLIVNT------NSGGHAFIGFYLAKELVKAGHEVTLFTRGK 90 (378)
T ss_pred cceEEEEec------cCCCceeEhHHHHHHHHHCCCEEEEEecCC
Confidence 478987754 357778888889999999999999998653
No 134
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=60.11 E-value=13 Score=36.73 Aligned_cols=36 Identities=25% Similarity=0.515 Sum_probs=27.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
|||++|+. .|=+| ..+.++..++||+|+-|+.....
T Consensus 1 mKIaiIgA-------sG~~G---s~i~~EA~~RGHeVTAivRn~~K 36 (211)
T COG2910 1 MKIAIIGA-------SGKAG---SRILKEALKRGHEVTAIVRNASK 36 (211)
T ss_pred CeEEEEec-------CchhH---HHHHHHHHhCCCeeEEEEeChHh
Confidence 89999986 34444 45777888999999999866543
No 135
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=59.88 E-value=12 Score=37.32 Aligned_cols=33 Identities=27% Similarity=0.599 Sum_probs=26.1
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++| ||.|.+-..|+..|++.||+|+++...
T Consensus 1 MkI~II----------GG~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 1 MKIAVL----------GGTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 677765 566777788999999999999987543
No 136
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=59.54 E-value=21 Score=33.06 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=31.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++|..... ..|-...++..+++.|.+.|++|.++-+.
T Consensus 1 Mkilii~gS~r---~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPR---KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSS---TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCC---CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 99999987532 35777888888889998899999999655
No 137
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=58.79 E-value=16 Score=38.67 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+..|||++|. .|++|.+ ++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG--------~GaiG~~---lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIG--------TGAIGGF---YGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEEC--------CCHHHHH---HHHHHHHCCCeEEEEEeC
Confidence 4559999985 5777775 556788899999999864
No 138
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=56.26 E-value=2.7e+02 Score=29.39 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=27.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
|||+.++. ..-|...-+..|++.|.+ .++++....|.+
T Consensus 1 ~ki~aisD------~RtGnt~QaiaLa~~l~r--~eyttk~l~~~~ 38 (329)
T COG3660 1 MKIWAISD------GRTGNTHQAIALAEQLTR--SEYTTKLLEYNN 38 (329)
T ss_pred CceEEeec------CCCccHHHHHHHHHHhhc--cceEEEEeeccc
Confidence 88998886 356777888889998876 466666555543
No 139
>PRK06756 flavodoxin; Provisional
Probab=55.66 E-value=21 Score=33.13 Aligned_cols=37 Identities=14% Similarity=0.341 Sum_probs=31.5
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
+|||++|-. +.+|-.+.++..++++|.+.|++|.++-
T Consensus 1 mmkv~IiY~-----S~tGnTe~vA~~ia~~l~~~g~~v~~~~ 37 (148)
T PRK06756 1 MSKLVMIFA-----SMSGNTEEMADHIAGVIRETENEIEVID 37 (148)
T ss_pred CceEEEEEE-----CCCchHHHHHHHHHHHHhhcCCeEEEee
Confidence 489998864 2589999999999999999999998774
No 140
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=54.72 E-value=24 Score=35.08 Aligned_cols=36 Identities=14% Similarity=0.011 Sum_probs=29.3
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHH--HHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v--~~LakaLa~~GheV~Vv~p~ 320 (617)
.+||++-. +||++.+- .+|++.|.+.|++|.|+...
T Consensus 5 ~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 5 GKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 46777654 68888885 89999999999999999754
No 141
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=53.99 E-value=21 Score=34.42 Aligned_cols=36 Identities=17% Similarity=0.315 Sum_probs=31.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||+|++-.. ..|-.+..+..+|..|.+.|++|.+.=
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 899988653 689999999999999999999999884
No 142
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=51.18 E-value=19 Score=37.12 Aligned_cols=35 Identities=40% Similarity=0.719 Sum_probs=27.0
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||+.|.. + .||+| +++.+|+.+|+++|..|.+|=
T Consensus 1 M~~iai~s---~---kGGvG~TTltAnLA~aL~~~G~~VlaID 37 (243)
T PF06564_consen 1 MKVIAIVS---P---KGGVGKTTLTANLAWALARLGESVLAID 37 (243)
T ss_pred CcEEEEec---C---CCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 66666654 2 56665 678999999999999999983
No 143
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=50.97 E-value=18 Score=36.60 Aligned_cols=26 Identities=27% Similarity=0.621 Sum_probs=23.1
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|.+-..+|+.|.+.||+|.++-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 67888899999999999999999644
No 144
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=50.93 E-value=24 Score=36.68 Aligned_cols=37 Identities=27% Similarity=0.379 Sum_probs=27.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
|||++.+.. ..-|=...+..|+++| +||+|++++...
T Consensus 1 MkIl~~v~~-----~G~GH~~R~~~la~~L--rg~~v~~~~~~~ 37 (318)
T PF13528_consen 1 MKILFYVQG-----HGLGHASRCLALARAL--RGHEVTFITSGP 37 (318)
T ss_pred CEEEEEeCC-----CCcCHHHHHHHHHHHH--ccCceEEEEcCC
Confidence 899998863 2334445567789999 599999999663
No 145
>PRK09271 flavodoxin; Provisional
Probab=50.79 E-value=28 Score=33.06 Aligned_cols=36 Identities=28% Similarity=0.390 Sum_probs=30.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||++|... .+|-.+.++..++++|...|++|.+.-
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 888888653 589999999999999999999987653
No 146
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=50.41 E-value=17 Score=40.13 Aligned_cols=38 Identities=32% Similarity=0.411 Sum_probs=29.8
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|||+++.. | .-|--.-+..|+++|.++||+|+.+|..
T Consensus 1 ~mkil~~~~---~---~~Ghv~p~~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 1 RMKILFVVC---G---AYGHVNPCLALGKELRRRGHEVVFASTG 38 (406)
T ss_pred CceEEEEec---c---ccccccchHHHHHHHHhcCCeEEEEeCH
Confidence 499999974 2 2344455788999999999999999864
No 147
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=49.42 E-value=24 Score=33.55 Aligned_cols=31 Identities=32% Similarity=0.627 Sum_probs=24.5
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||||.+| |+|.+-..+++.|.+.||+|.++-
T Consensus 1 m~~Ig~I-----------GlG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 1 MMKIGFI-----------GLGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp -BEEEEE-------------SHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCEEEEE-----------chHHHHHHHHHHHHhcCCeEEeec
Confidence 4788887 467788899999999999998874
No 148
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=49.05 E-value=27 Score=37.74 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=30.9
Q ss_pred CCCCCCCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 268 KPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 268 ~~~p~~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+-|-+.+. .|||+++ ||.|-+-..|++.|.++||+|+++..
T Consensus 13 ~~~~~~~~-~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 13 REPYWPSE-KLRICIT----------GAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCCCCC-CCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 33444443 4898864 67777778899999999999999874
No 149
>CHL00194 ycf39 Ycf39; Provisional
Probab=48.98 E-value=20 Score=37.59 Aligned_cols=33 Identities=15% Similarity=0.397 Sum_probs=25.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||+++ ||.|..-..|+++|.++||+|++++..
T Consensus 1 MkIlVt----------GatG~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 1 MSLLVI----------GATGTLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CEEEEE----------CCCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence 677764 555666677888999999999999754
No 150
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=48.55 E-value=84 Score=29.88 Aligned_cols=19 Identities=26% Similarity=0.157 Sum_probs=16.5
Q ss_pred hhcCeeEEeCHHHHHHHHh
Q 007130 476 KTADRVVTVSRGYSWELKT 494 (617)
Q Consensus 476 ~~AD~VIaVS~~~a~~l~~ 494 (617)
..+|+-++.|+.+++++.+
T Consensus 136 ~~~D~y~Vase~~~~~l~~ 154 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE 154 (169)
T ss_pred CCCCEEEECCHHHHHHHHH
Confidence 4689999999999999885
No 151
>PRK10037 cell division protein; Provisional
Probab=48.24 E-value=23 Score=36.00 Aligned_cols=34 Identities=29% Similarity=0.547 Sum_probs=27.1
Q ss_pred cEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEE
Q 007130 278 MNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVV 317 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv 317 (617)
|||+-|+. .-||+|. .+.+||.+|+++|++|.||
T Consensus 1 ~~~iav~n------~KGGvGKTT~a~nLA~~La~~G~rVLlI 36 (250)
T PRK10037 1 MAILGLQG------VRGGVGTTSITAALAWSLQMLGENVLVI 36 (250)
T ss_pred CcEEEEec------CCCCccHHHHHHHHHHHHHhcCCcEEEE
Confidence 66666664 3688875 4689999999999999999
No 152
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=48.01 E-value=24 Score=32.23 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=26.2
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++... .++....+.++.+.|.+.|++|.|+...
T Consensus 1 k~i~l~vt-------Gs~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVT-------GSIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE--------SSGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEE-------CHHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 68888764 2333444899999999999999999643
No 153
>PRK09739 hypothetical protein; Provisional
Probab=46.91 E-value=46 Score=32.69 Aligned_cols=42 Identities=29% Similarity=0.318 Sum_probs=30.7
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.+|||++|... |. ..|=....+..+.++|.+.||+|+++-..
T Consensus 2 ~mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 2 QSMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CCceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 46999999864 53 23335566777888888899999988543
No 154
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=45.82 E-value=35 Score=32.91 Aligned_cols=38 Identities=26% Similarity=0.373 Sum_probs=33.5
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
||+|+-|+.. +..|=.+.+..|.+.|.++|+.|-+|=-
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH 38 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKH 38 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEe
Confidence 5899999863 6889999999999999999999999943
No 155
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=45.22 E-value=30 Score=35.58 Aligned_cols=38 Identities=34% Similarity=0.389 Sum_probs=28.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+.... |=.+-.+..|.++|.+.| +|+|++|....
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~ 38 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQR 38 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCCc
Confidence 899987754 222345788899999988 99999997543
No 156
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=44.83 E-value=35 Score=36.12 Aligned_cols=31 Identities=29% Similarity=0.623 Sum_probs=27.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||++ +||.|-+..+|++.|...||+|.++=
T Consensus 28 lrI~i----------tGgaGFIgSHLvdkLm~egh~VIa~D 58 (350)
T KOG1429|consen 28 LRILI----------TGGAGFIGSHLVDKLMTEGHEVIALD 58 (350)
T ss_pred cEEEE----------ecCcchHHHHHHHHHHhcCCeEEEEe
Confidence 89887 47888899999999999999998874
No 157
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=44.23 E-value=29 Score=35.47 Aligned_cols=33 Identities=30% Similarity=0.584 Sum_probs=26.4
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~ 318 (617)
|+|++. . -||+| +.+.+||.+|+++|++|.||=
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD 35 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIG 35 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 677766 2 47776 567999999999999999983
No 158
>CHL00175 minD septum-site determining protein; Validated
Probab=44.07 E-value=40 Score=34.80 Aligned_cols=35 Identities=29% Similarity=0.574 Sum_probs=27.7
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~ 318 (617)
+||+.|+. .-||+| +.+.+||.+|+++|.+|.+|=
T Consensus 15 ~~vi~v~s------~KGGvGKTt~a~nLA~~La~~g~~vlliD 51 (281)
T CHL00175 15 SRIIVITS------GKGGVGKTTTTANLGMSIARLGYRVALID 51 (281)
T ss_pred ceEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 57777775 256665 667999999999999998884
No 159
>PLN00198 anthocyanidin reductase; Provisional
Probab=43.86 E-value=39 Score=35.62 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=26.4
Q ss_pred CCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 273 AGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 273 ~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
....+|+|++. ||.|-.-..|+++|.++|++|.++...
T Consensus 5 ~~~~~~~vlIt----------G~~GfIG~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 5 TPTGKKTACVI----------GGTGFLASLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred cCCCCCeEEEE----------CCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 34445676653 555555667899999999999877644
No 160
>PRK06703 flavodoxin; Provisional
Probab=43.37 E-value=41 Score=31.29 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=31.6
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+|||+++-.. .+|-...++..+++.|...|++|.++-.
T Consensus 1 mmkv~IiY~S-----~tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 1 MAKILIAYAS-----MSGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred CCeEEEEEEC-----CCchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 4888887542 5899999999999999999999988743
No 161
>PLN02778 3,5-epimerase/4-reductase
Probab=43.09 E-value=30 Score=36.20 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=24.4
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv 317 (617)
.||||+. ||.|-.-..|++.|.++||+|++.
T Consensus 9 ~~kiLVt----------G~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 9 TLKFLIY----------GKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCeEEEE----------CCCCHHHHHHHHHHHhCCCEEEEe
Confidence 4898864 666667778899999999999754
No 162
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=42.65 E-value=36 Score=35.33 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=28.2
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
.||||+....=.. +.-+..|+++|.+.| +|+|++|....
T Consensus 5 ~M~ILltNDDGi~-------a~Gi~aL~~~l~~~g-~V~VvAP~~~~ 43 (257)
T PRK13932 5 KPHILVCNDDGIE-------GEGIHVLAASMKKIG-RVTVVAPAEPH 43 (257)
T ss_pred CCEEEEECCCCCC-------CHHHHHHHHHHHhCC-CEEEEcCCCCC
Confidence 3899987765221 234677888898888 89999997543
No 163
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=42.35 E-value=39 Score=31.67 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=31.6
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||||++|... ..|..+.++..++..|...|++|.+..
T Consensus 1 M~ki~Ivy~S-----~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 1 MMKILIVYGS-----RTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CCeEEEEEEc-----CCCcHHHHHHHHHHHhccCCceEEEee
Confidence 5899998753 589999999999999999999995543
No 164
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=42.30 E-value=25 Score=37.32 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=31.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
|||+++.. |+....--......|..+.+++||+|.++.|..
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~~ 41 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPGD 41 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehhh
Confidence 89999985 443334345577899999999999999998864
No 165
>PLN02206 UDP-glucuronate decarboxylase
Probab=41.93 E-value=38 Score=37.84 Aligned_cols=43 Identities=35% Similarity=0.435 Sum_probs=31.8
Q ss_pred cCCCCCCCCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 266 EAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 266 ~~~~~p~~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
+.+.|=....+.|||++ +||.|-+-..|++.|.++|++|.++.
T Consensus 108 ~~~~~~~~~~~~~kILV----------TGatGfIGs~Lv~~Ll~~G~~V~~ld 150 (442)
T PLN02206 108 GGKIPLGLKRKGLRVVV----------TGGAGFVGSHLVDRLMARGDSVIVVD 150 (442)
T ss_pred CCcCccccccCCCEEEE----------ECcccHHHHHHHHHHHHCcCEEEEEe
Confidence 34444444456699886 46777777889999999999998875
No 166
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=41.87 E-value=62 Score=29.90 Aligned_cols=42 Identities=21% Similarity=0.213 Sum_probs=31.1
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRG-HRVMVVAPHYG 322 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~G-heV~Vv~p~y~ 322 (617)
||+.++..+ +|| .-=-+..+.++|++|.+.| ++|.|+....+
T Consensus 1 m~~~Ivvt~-ppY--g~q~a~~A~~fA~all~~gh~~v~iFly~Dg 43 (126)
T COG1553 1 MKYTIVVTG-PPY--GTESAFSALRFAEALLEQGHELVRLFLYQDG 43 (126)
T ss_pred CeEEEEEec-CCC--ccHHHHHHHHHHHHHHHcCCeEEEEEEeecc
Confidence 788888765 675 2245677899999999997 58888875443
No 167
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=41.75 E-value=25 Score=37.36 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHhhh
Q 007130 97 SKKVLAMQKQLLQQISERR 115 (617)
Q Consensus 97 s~k~~~~~~~~~~~~~~~~ 115 (617)
=-++|++|+.-|.|||+--
T Consensus 320 w~~~L~~~~pel~~l~~s~ 338 (407)
T KOG2130|consen 320 WARLLALQRPELADLADST 338 (407)
T ss_pred HHHHHhhcChhHHHHhhhh
Confidence 3468999999999998743
No 168
>PRK12827 short chain dehydrogenase; Provisional
Probab=41.68 E-value=48 Score=32.66 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=25.0
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
..|+|+++.. .||+|. .|++.|+++|++|.++..
T Consensus 5 ~~~~ilItGa-------sg~iG~---~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGG-------SGGLGR---AIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEEECC-------CChHHH---HHHHHHHHCCCeEEEEcC
Confidence 3477776542 577764 788899999999988764
No 169
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=41.11 E-value=46 Score=34.46 Aligned_cols=38 Identities=29% Similarity=0.479 Sum_probs=26.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+....=.. .-| +..|+++|.+ +|+|+|++|....
T Consensus 1 M~ILvtNDDGi~---apG----l~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 1 MNILLTNDDGIN---AEG----INTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred CeEEEEcCCCCC---Chh----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 899988765321 222 6778888875 5799999997543
No 170
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=40.29 E-value=37 Score=35.83 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=26.1
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.|||+++. .|++|.++.. .|++.|++|++++..
T Consensus 2 ~m~I~IiG--------aGaiG~~~a~---~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG--------AGSLGSLWAC---RLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEEC--------CCHHHHHHHH---HHHhCCCCeEEEEec
Confidence 48999885 6889887543 467789999999874
No 171
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=40.13 E-value=32 Score=36.52 Aligned_cols=38 Identities=37% Similarity=0.690 Sum_probs=27.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHH--HHHHHHHHHCCCeEEEEecCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v--~~LakaLa~~GheV~Vv~p~y~ 322 (617)
|||++++. -||+|.-. ..+|-+++++|++|.|++....
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 88999884 57777554 5588888999999999976543
No 172
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=38.71 E-value=61 Score=32.65 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=23.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|+++.. .|++|. .|++.|.+.||+|++++..
T Consensus 18 ~~ilItGa-------sG~iG~---~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 18 KTVFVAGA-------TGRTGK---RIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred CeEEEECC-------CcHHHH---HHHHHHHhCCCEEEEEecC
Confidence 78887653 465655 5677788899999887643
No 173
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=38.56 E-value=45 Score=33.83 Aligned_cols=36 Identities=31% Similarity=0.441 Sum_probs=28.0
Q ss_pred cEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv~p 319 (617)
|||+.|+. .-||+|. .+..|+.+|+++|..|.|+=.
T Consensus 1 M~iI~v~n------~KGGvGKTT~a~nLA~~la~~G~~VlliD~ 38 (231)
T PRK13849 1 MKLLTFCS------FKGGAGKTTALMGLCAALASDGKRVALFEA 38 (231)
T ss_pred CeEEEEEC------CCCCccHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 67776665 3688875 568899999999999988843
No 174
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=38.08 E-value=58 Score=31.80 Aligned_cols=37 Identities=16% Similarity=0.370 Sum_probs=28.3
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||++.|+..- ..-|-.+.+..||.+|+++|++|.+|=
T Consensus 17 ~kvI~v~s~k----gG~GKTt~a~~LA~~la~~G~rVllID 53 (204)
T TIGR01007 17 IKVLLITSVK----PGEGKSTTSANIAVAFAQAGYKTLLID 53 (204)
T ss_pred CcEEEEecCC----CCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 8888887521 233455688999999999999998884
No 175
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=37.54 E-value=16 Score=33.79 Aligned_cols=34 Identities=38% Similarity=0.559 Sum_probs=24.5
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
..|||.+|.. |.+-..|+++|.+.||+|.-+..+
T Consensus 9 ~~l~I~iIGa-----------GrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 9 ARLKIGIIGA-----------GRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ---EEEEECT-----------SCCCCHHHHHHHHTTSEEEEESSC
T ss_pred CccEEEEECC-----------CHHHHHHHHHHHHCCCeEEEEEeC
Confidence 3499999964 344478999999999999887543
No 176
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=36.93 E-value=1.5e+02 Score=31.69 Aligned_cols=100 Identities=18% Similarity=0.219 Sum_probs=47.4
Q ss_pred HHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEecCCcCCCCCCccccccccCCCCccccccccCCchHH
Q 007130 473 AGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQC 552 (617)
Q Consensus 473 ~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpNGID~~~f~P~~d~~l~~~~~~~~~~e~~~~~k~~~ 552 (617)
......|.+++.|+.+.+.+.+ .+|. +..+ ++..|. |..|.... .....
T Consensus 130 ~~~~~~d~~~~~s~~~~~~~~~-~f~~--------~~~~--i~~~G~------PR~D~l~~--------------~~~~~ 178 (369)
T PF04464_consen 130 RNYRNYDYFIVSSEFEKEIFKK-AFGY--------PEDK--ILVTGY------PRNDYLFN--------------KSKEN 178 (369)
T ss_dssp HHHTT-SEEEESSHHHHHHHHH-HTT----------GGG--EEES--------GGGHHHHH--------------STT-H
T ss_pred hhccCCcEEEECCHHHHHHHHH-Hhcc--------Ccce--EEEeCC------CeEhHHhc--------------cCHHH
Confidence 4556889999999988776654 3432 3333 444564 33332110 11122
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeCCccccCH--------HHHHHHHHhccCCCcEEEEEec
Q 007130 553 KAALQREFGLPVRDDVPVIGFIGRLDHQKGV--------DLIAEAIPWMMGQDVQLSHVGH 605 (617)
Q Consensus 553 K~~Lr~~lGl~~~~d~~vIlfVGRL~~qKGv--------dlLIeA~~~L~~~dv~LVIvG~ 605 (617)
+..+++.++++ .++++|+|+=.+...... .+-++.+..+...++.|++-..
T Consensus 179 ~~~i~~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~H 237 (369)
T PF04464_consen 179 RNRIKKKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPH 237 (369)
T ss_dssp HHHHHHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--S
T ss_pred HHHHHHHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeC
Confidence 56688888886 466799999655442222 1223344344556777777654
No 177
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=36.86 E-value=44 Score=34.61 Aligned_cols=32 Identities=38% Similarity=0.699 Sum_probs=24.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++|. .|.+| ..++..|++.||+|+++...
T Consensus 1 m~I~IiG--------~G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILG--------AGAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEEC--------CCHHH---HHHHHHHHhCCCeEEEEECC
Confidence 7888874 45555 55677788899999999864
No 178
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=36.79 E-value=35 Score=35.75 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=23.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|||+++ ||.|-.-..|++.|.++||+|.++..
T Consensus 1 m~vlVt----------GatG~iG~~l~~~L~~~g~~V~~~~~ 32 (338)
T PRK10675 1 MRVLVT----------GGSGYIGSHTCVQLLQNGHDVVILDN 32 (338)
T ss_pred CeEEEE----------CCCChHHHHHHHHHHHCCCeEEEEec
Confidence 777764 44444455678889999999998853
No 179
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=36.77 E-value=45 Score=34.50 Aligned_cols=38 Identities=34% Similarity=0.446 Sum_probs=28.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+.... |=-.--+..|+++|. .+++|+|++|....
T Consensus 1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~q 38 (252)
T COG0496 1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDREQ 38 (252)
T ss_pred CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCCC
Confidence 899987654 222334677888888 88999999997543
No 180
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=36.64 E-value=55 Score=34.51 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=27.0
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
..|||++|. .|.+-..+++.|.+.||+|+++...
T Consensus 3 ~~m~I~iiG-----------~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILG-----------AGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEEC-----------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358998874 4566678999999999999988754
No 181
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=36.44 E-value=56 Score=30.07 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=28.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEE
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMV 316 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~V 316 (617)
|||++|-. +.+|-.+.++..+++.|...|++|.+
T Consensus 1 M~i~IiY~-----S~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYL-----SLSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEE-----CCCChHHHHHHHHHHHHhhCCeeEEe
Confidence 78888754 25899999999999999999999874
No 182
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=35.96 E-value=16 Score=40.88 Aligned_cols=27 Identities=33% Similarity=0.384 Sum_probs=21.5
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.=-..+..++++|+++||+|++++|..
T Consensus 11 SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 11 SHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp -SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 345668999999999999999999864
No 183
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=35.83 E-value=47 Score=34.81 Aligned_cols=33 Identities=36% Similarity=0.584 Sum_probs=24.3
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
||||++|. .|.+| ..++..|++.||+|+++...
T Consensus 1 mmkI~iiG--------~G~mG---~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 1 MMKIAVLG--------AGSWG---TALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CCEEEEEC--------CCHHH---HHHHHHHHhCCCEEEEEECC
Confidence 48998874 34444 55777888899999988753
No 184
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=35.22 E-value=62 Score=32.30 Aligned_cols=33 Identities=27% Similarity=0.652 Sum_probs=23.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|+++.. .||+|. .+++.|.++|++|.++...
T Consensus 1 ~~vlItGa-------sg~iG~---~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGA-------TAGFGE---CITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECC-------CchHHH---HHHHHHHHCCCEEEEEECC
Confidence 67766542 566665 4688899999999887643
No 185
>PLN02712 arogenate dehydrogenase
Probab=35.10 E-value=1.2e+02 Score=36.02 Aligned_cols=35 Identities=20% Similarity=0.419 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
..+|+|++|. .| .+-..|+++|.+.|++|.++.+.
T Consensus 50 ~~~~kIgIIG--------~G---~mG~slA~~L~~~G~~V~~~dr~ 84 (667)
T PLN02712 50 TTQLKIAIIG--------FG---NYGQFLAKTLISQGHTVLAHSRS 84 (667)
T ss_pred CCCCEEEEEc--------cC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4569999984 34 44457889999999999887654
No 186
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=35.04 E-value=43 Score=34.80 Aligned_cols=31 Identities=23% Similarity=0.447 Sum_probs=23.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|||+++. .|++|. .++..|++.||+|+++..
T Consensus 1 mkI~IiG--------~G~iG~---~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVG--------AGAVGG---TFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEEC--------CCHHHH---HHHHHHHHCCCceEEEec
Confidence 7888875 455555 466678888999999986
No 187
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=34.93 E-value=54 Score=34.00 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=26.3
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+....= +. +--+..|.++|++ +|+|+|++|....
T Consensus 1 M~ILlTNDDG-----i~--a~Gi~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDG-----IT--SPGIIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCC-----CC--CHHHHHHHHHHHh-CCcEEEEccCCCC
Confidence 8999877642 11 2236677788865 5799999997643
No 188
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=34.86 E-value=57 Score=33.78 Aligned_cols=32 Identities=34% Similarity=0.597 Sum_probs=26.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||+++ ||.+. ...|++.|.+.||+|.+.+..
T Consensus 1 m~ILvl----------GGT~e-gr~la~~L~~~g~~v~~s~~t 32 (256)
T TIGR00715 1 MTVLLM----------GGTVD-SRAIAKGLIAQGIEILVTVTT 32 (256)
T ss_pred CeEEEE----------echHH-HHHHHHHHHhCCCeEEEEEcc
Confidence 677765 56665 899999999999999988754
No 189
>PRK05920 aromatic acid decarboxylase; Validated
Probab=34.44 E-value=73 Score=31.94 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=27.9
Q ss_pred CcEEEEEcCccCCCCCCCcHH-HHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLG-DVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg-~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
++||++.. +||++ ..+..+.+.|.+.|++|.|++...
T Consensus 3 ~krIllgI--------TGsiaa~ka~~lvr~L~~~g~~V~vi~T~~ 40 (204)
T PRK05920 3 MKRIVLAI--------TGASGAIYGVRLLECLLAADYEVHLVISKA 40 (204)
T ss_pred CCEEEEEE--------eCHHHHHHHHHHHHHHHHCCCEEEEEEChh
Confidence 46787664 34444 457899999999999999998543
No 190
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=34.13 E-value=51 Score=34.94 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=25.2
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|||++|. +|.+-..++..|++.||+|+++.+.
T Consensus 4 ~m~I~iIG-----------~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 4 GMRVAVLG-----------AGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCeEEEEC-----------cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 48998874 3444556788889999999999764
No 191
>PLN02427 UDP-apiose/xylose synthase
Probab=34.11 E-value=52 Score=35.55 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=26.4
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEec
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARR-GHRVMVVAP 319 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~-GheV~Vv~p 319 (617)
.+|||++ +||.|-.-..|++.|.++ ||+|.++..
T Consensus 13 ~~~~VlV----------TGgtGfIGs~lv~~L~~~~g~~V~~l~r 47 (386)
T PLN02427 13 KPLTICM----------IGAGGFIGSHLCEKLMTETPHKVLALDV 47 (386)
T ss_pred cCcEEEE----------ECCcchHHHHHHHHHHhcCCCEEEEEec
Confidence 5689875 467777778899999998 599988763
No 192
>PRK05723 flavodoxin; Provisional
Probab=34.05 E-value=60 Score=30.75 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=30.2
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||.++-.. .+|-.+.++..|++.|.+.|++|+++.
T Consensus 1 ~~i~I~ygS-----~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSGS-----VYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEEc-----CchHHHHHHHHHHHHHHHCCCceeecC
Confidence 778877442 689999999999999999999998753
No 193
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=33.52 E-value=67 Score=33.30 Aligned_cols=28 Identities=36% Similarity=0.391 Sum_probs=21.9
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+||.|-.-..|++.|.++||+|.++...
T Consensus 10 tGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 10 TGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred ECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3566666677899999999999888654
No 194
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=33.50 E-value=73 Score=33.25 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=27.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
|+-++||. -.+|+|. ++++.|+++|++|.+++.+..
T Consensus 6 ~~~~lITG------ASsGIG~---~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 6 GKTALITG------ASSGIGA---ELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CcEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCcHH
Confidence 45555554 2688885 789999999999999987643
No 195
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=33.47 E-value=57 Score=34.09 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=27.2
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+....=. -+.-+..|+++|.+.| +|+|++|....
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~al~~~g-~V~VvAP~~eq 38 (266)
T PRK13934 1 MKILVTNDDGV-------HSPGLRLLYEFVSPLG-EVDVVAPETPK 38 (266)
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEccCCCC
Confidence 89998776421 1234677888888887 89999997543
No 196
>PRK05246 glutathione synthetase; Provisional
Probab=33.15 E-value=41 Score=35.65 Aligned_cols=42 Identities=24% Similarity=0.273 Sum_probs=32.8
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.|||+++.. |+....--......|+++..++||+|.++.|..
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~d 42 (316)
T PRK05246 1 MMKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPDD 42 (316)
T ss_pred CceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehhh
Confidence 389999985 444444445666889999999999999999874
No 197
>PRK07308 flavodoxin; Validated
Probab=33.01 E-value=78 Score=29.25 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=24.1
Q ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 292 KTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
.+|..+.++..+++.|.+.|++|.+.-
T Consensus 11 ~tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 11 MTGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CCchHHHHHHHHHHHHHhCCCceEEEe
Confidence 489999999999999999999988763
No 198
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=33.00 E-value=69 Score=31.35 Aligned_cols=34 Identities=32% Similarity=0.375 Sum_probs=22.8
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|+|+++.. .||+| ..|++.|.++||+|.+++..
T Consensus 6 ~~~vlItGa-------sg~iG---~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 6 GRVALVTGA-------ARGLG---RAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCEEEEeCC-------CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 356665432 45555 56788889999998776544
No 199
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=32.61 E-value=80 Score=30.93 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=26.7
Q ss_pred cEEEEEcCccCCCCCCCcHH-HHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLG-DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg-~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+||++.. +|+++ ..+.++.+.|.+.|++|.|+...
T Consensus 2 k~Ill~v--------tGsiaa~~~~~li~~L~~~g~~V~vv~T~ 37 (182)
T PRK07313 2 KNILLAV--------SGSIAAYKAADLTSQLTKRGYQVTVLMTK 37 (182)
T ss_pred CEEEEEE--------eChHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 5777665 45554 44689999999999999999744
No 200
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=32.32 E-value=52 Score=34.92 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=24.7
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|||++|. .|.+| ..++..|++.||+|+++...
T Consensus 2 ~mkI~IiG--------~G~mG---~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLG--------AGSIG---CYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEEC--------CCHHH---HHHHHHHHhcCCcEEEEecH
Confidence 48999885 35454 45777888899999999753
No 201
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=32.21 E-value=83 Score=35.66 Aligned_cols=37 Identities=30% Similarity=0.376 Sum_probs=29.4
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHH-HHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDV-AGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~-v~~LakaLa~~GheV~Vv~p~ 320 (617)
..+||++.. +||++.| +.+|++.|.+.|++|.|+...
T Consensus 69 ~~k~IllgV--------tGsIAayka~~lvr~L~k~G~~V~VvmT~ 106 (475)
T PRK13982 69 ASKRVTLII--------GGGIAAYKALDLIRRLKERGAHVRCVLTK 106 (475)
T ss_pred CCCEEEEEE--------ccHHHHHHHHHHHHHHHhCcCEEEEEECc
Confidence 346888775 5777665 689999999999999999754
No 202
>PRK06849 hypothetical protein; Provisional
Probab=32.13 E-value=62 Score=35.18 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=27.3
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
++|+||++... ......++++|.+.||+|+++...
T Consensus 3 ~~~~VLI~G~~----------~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGAR----------APAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCC----------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899987542 225788999999999999999654
No 203
>PRK06924 short chain dehydrogenase; Provisional
Probab=31.66 E-value=59 Score=32.30 Aligned_cols=25 Identities=28% Similarity=0.583 Sum_probs=19.0
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+| ..+++.|+++|++|.++...
T Consensus 10 sggiG---~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 10 SQGLG---EAIANQLLEKGTHVISISRT 34 (251)
T ss_pred CchHH---HHHHHHHHhcCCEEEEEeCC
Confidence 45555 46789999999999887643
No 204
>PRK09134 short chain dehydrogenase; Provisional
Probab=31.58 E-value=77 Score=31.77 Aligned_cols=24 Identities=29% Similarity=0.340 Sum_probs=18.6
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.||+|. .+++.|.++|++|.++..
T Consensus 18 s~giG~---~la~~l~~~g~~v~~~~~ 41 (258)
T PRK09134 18 ARRIGR---AIALDLAAHGFDVAVHYN 41 (258)
T ss_pred CcHHHH---HHHHHHHHCCCEEEEEeC
Confidence 567765 678889999999987754
No 205
>PRK05854 short chain dehydrogenase; Provisional
Probab=31.52 E-value=90 Score=32.75 Aligned_cols=33 Identities=27% Similarity=0.438 Sum_probs=24.9
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+++|+. ..+|+|. .++++|+++|++|.+++..
T Consensus 15 k~~lITG------as~GIG~---~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 15 KRAVVTG------ASDGLGL---GLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5666764 3677775 6788999999999888654
No 206
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=31.42 E-value=58 Score=32.09 Aligned_cols=33 Identities=33% Similarity=0.418 Sum_probs=22.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|++++|+. ..||+| ..+++.|+++|++|.++..
T Consensus 1 ~~~~lItG------a~g~iG---~~l~~~l~~~g~~v~~~~~ 33 (247)
T PRK09730 1 MAIALVTG------GSRGIG---RATALLLAQEGYTVAVNYQ 33 (247)
T ss_pred CCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 56666653 234555 5688899999999987643
No 207
>PLN02686 cinnamoyl-CoA reductase
Probab=31.42 E-value=72 Score=34.44 Aligned_cols=26 Identities=27% Similarity=0.369 Sum_probs=20.5
Q ss_pred CcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 294 GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
||.|-.-..|++.|.++||+|.++..
T Consensus 60 GatGfIG~~lv~~L~~~G~~V~~~~r 85 (367)
T PLN02686 60 GGVSFLGLAIVDRLLRHGYSVRIAVD 85 (367)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEeC
Confidence 55566667788999999999988754
No 208
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=31.40 E-value=67 Score=33.25 Aligned_cols=38 Identities=29% Similarity=0.277 Sum_probs=27.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
||||+....=. -+.-+..|+++|.+. |+|+|++|....
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~l~~~-~~V~VvAP~~~q 38 (250)
T PRK00346 1 MRILLTNDDGI-------HAPGIRALAEALREL-ADVTVVAPDRER 38 (250)
T ss_pred CeEEEECCCCC-------CChhHHHHHHHHHhC-CCEEEEeCCCCC
Confidence 89998776421 123367888899888 699999997543
No 209
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=31.39 E-value=58 Score=36.05 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=25.5
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
++|||++|. +|.+-.-+|..|++.||+|+++-.
T Consensus 2 ~~~kI~VIG-----------lG~~G~~~A~~La~~G~~V~~~D~ 34 (415)
T PRK11064 2 SFETISVIG-----------LGYIGLPTAAAFASRQKQVIGVDI 34 (415)
T ss_pred CccEEEEEC-----------cchhhHHHHHHHHhCCCEEEEEeC
Confidence 458888874 444556788899999999999854
No 210
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=31.01 E-value=73 Score=33.89 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=23.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|||++. ||.|-.-..|+++|.++|++|.++..
T Consensus 11 ~~vLVt----------G~~GfIG~~l~~~L~~~G~~V~~~~r 42 (353)
T PLN02896 11 GTYCVT----------GATGYIGSWLVKLLLQRGYTVHATLR 42 (353)
T ss_pred CEEEEE----------CCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 888865 44555556788889999999988753
No 211
>PRK05884 short chain dehydrogenase; Provisional
Probab=30.86 E-value=80 Score=31.23 Aligned_cols=33 Identities=21% Similarity=0.522 Sum_probs=23.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++... .||+| ..+++.|.++|++|.++...
T Consensus 1 m~vlItGa-------s~giG---~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGG-------DTDLG---RTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CeEEEEeC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67765542 56666 56888899999999888643
No 212
>PRK05693 short chain dehydrogenase; Provisional
Probab=30.84 E-value=60 Score=32.99 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=24.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
||+++|+. ..||+|. .+++.|+++|++|.+++..
T Consensus 1 mk~vlItG------asggiG~---~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITG------CSSGIGR---ALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEec------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 56666664 2577775 5777888999999887643
No 213
>PRK00211 sulfur relay protein TusC; Validated
Probab=30.65 E-value=96 Score=28.17 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=32.1
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
||||++|... +|| .+-.+.-..+++-+++..+++|.|+....+
T Consensus 1 M~ki~~i~~~-~Py--g~~~~~eaLd~ala~~a~~~~v~vff~~Dg 43 (119)
T PRK00211 1 MKRIAFVFRQ-APH--GTASGREGLDALLATSAFTEDIGVFFIDDG 43 (119)
T ss_pred CceEEEEecC-CCC--CCHHHHHHHHHHHHHhcccCCeeEEEEhhh
Confidence 4679988874 685 333666777778888888999999986644
No 214
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=30.61 E-value=81 Score=30.69 Aligned_cols=38 Identities=26% Similarity=0.511 Sum_probs=28.2
Q ss_pred cEEEEEcCccCCCCCCCcH-HHHHHHHHHHHHHCC-CeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGL-GDVAGALPKALARRG-HRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGl-g~~v~~LakaLa~~G-heV~Vv~ 318 (617)
||||+|... |. ..++. ......+.++|.+.| ++|+++=
T Consensus 1 mkiLvI~as--p~-~~~S~s~~l~~~~~~~~~~~~~~~v~~~d 40 (199)
T PF02525_consen 1 MKILVINAS--PR-PEGSFSRALADAFLEGLQEAGPHEVEIRD 40 (199)
T ss_dssp EEEEEEE----SS-TTTSHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEEEcC--CC-CccCHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 899999864 53 22444 666788999999999 9998884
No 215
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=30.58 E-value=65 Score=31.25 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=29.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||++|-. +..|-...++..+++.|.. |++|.++-
T Consensus 1 MkilIvY~-----S~~G~T~~iA~~Ia~~l~~-g~~v~~~~ 35 (177)
T PRK11104 1 MKTLILYS-----SRDGQTRKIASYIASELKE-GIQCDVVN 35 (177)
T ss_pred CcEEEEEE-----CCCChHHHHHHHHHHHhCC-CCeEEEEE
Confidence 78888864 3689999999999999988 99998874
No 216
>PRK09004 FMN-binding protein MioC; Provisional
Probab=30.57 E-value=82 Score=29.54 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=28.7
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||+++.. +.+|-.+.++..|++.|.++|++|.++.
T Consensus 3 ~i~I~yg-----S~tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 3 DITLISG-----STLGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred eEEEEEE-----cCchHHHHHHHHHHHHHHHcCCceEEec
Confidence 5666533 2589999999999999999999999864
No 217
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=30.50 E-value=1e+02 Score=27.86 Aligned_cols=40 Identities=15% Similarity=0.035 Sum_probs=31.9
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHH--HHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v--~~LakaLa~~GheV~Vv~p~y 321 (617)
+|||+.|+. .| .|-...|+ ..|.++..++||++.|=+...
T Consensus 2 ~mkivaVta--cp---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg~ 43 (114)
T PRK10427 2 MAYLVAVTA--CV---SGVAHTYMAAERLEKLCQLEKWGVKIETQGA 43 (114)
T ss_pred CceEEEEee--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 389999986 24 68788887 778888889999999987543
No 218
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=30.41 E-value=81 Score=34.68 Aligned_cols=38 Identities=29% Similarity=0.378 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEEe
Q 007130 275 ANVMNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 275 ~~~MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv~ 318 (617)
..+++|+-|+. .-||+|. .+.+||.+|+.+|++|.||=
T Consensus 103 ~~~~~vIav~n------~KGGVGKTTta~nLA~~LA~~G~rVLlID 142 (387)
T PHA02519 103 DKNPVVLAVMS------HKGGVYKTSSAVHTAQWLALQGHRVLLIE 142 (387)
T ss_pred CCCceEEEEec------CCCCCcHHHHHHHHHHHHHhCCCcEEEEe
Confidence 34577777765 2577764 57899999999999999984
No 219
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=30.39 E-value=57 Score=33.45 Aligned_cols=29 Identities=31% Similarity=0.367 Sum_probs=23.3
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
+||.|-+-..|++.|.++||+|.++....
T Consensus 6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~ 34 (314)
T COG0451 6 TGGAGFIGSHLVERLLAAGHDVRGLDRLR 34 (314)
T ss_pred EcCcccHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35556666899999999999999998653
No 220
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=30.22 E-value=47 Score=31.34 Aligned_cols=29 Identities=41% Similarity=0.508 Sum_probs=24.0
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.||-|..-..++++|.++||+|++++.+.
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~ 32 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRSP 32 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESSG
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCc
Confidence 46666777789999999999999999663
No 221
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=30.16 E-value=48 Score=32.43 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=20.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|||+++...| +-.-+|-.|++.||+|..+=
T Consensus 1 M~I~ViGlGy-----------vGl~~A~~lA~~G~~V~g~D 30 (185)
T PF03721_consen 1 MKIAVIGLGY-----------VGLPLAAALAEKGHQVIGVD 30 (185)
T ss_dssp -EEEEE--ST-----------THHHHHHHHHHTTSEEEEE-
T ss_pred CEEEEECCCc-----------chHHHHHHHHhCCCEEEEEe
Confidence 8888886543 34668889999999998884
No 222
>PRK07454 short chain dehydrogenase; Provisional
Probab=30.02 E-value=71 Score=31.55 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=23.9
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||.++|+. ..||+| ..+++.|.++|++|.++...
T Consensus 5 ~~k~vlItG------~sg~iG---~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITG------ASSGIG---KATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 366666652 245555 56788889999998888643
No 223
>PRK05993 short chain dehydrogenase; Provisional
Probab=30.02 E-value=73 Score=32.53 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=24.8
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
++|+++|+. ..||+|. .+++.|+++|++|.++...
T Consensus 3 ~~k~vlItG------asggiG~---~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITG------CSSGIGA---YCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEECC
Confidence 356666653 2577775 5788899999999888644
No 224
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=29.81 E-value=72 Score=32.02 Aligned_cols=26 Identities=38% Similarity=0.722 Sum_probs=21.9
Q ss_pred CCcHHH--HHHHHHHHHHHCCCeEEEEe
Q 007130 293 TGGLGD--VAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 293 ~GGlg~--~v~~LakaLa~~GheV~Vv~ 318 (617)
-||+|. .+..||.+|+++|.+|.+|=
T Consensus 10 kGGvGKTt~a~~lA~~la~~g~~vlliD 37 (261)
T TIGR01968 10 KGGVGKTTTTANLGTALARLGKKVVLID 37 (261)
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEEE
Confidence 566665 77999999999999999884
No 225
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=29.73 E-value=95 Score=30.51 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=31.0
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEec
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVAP 319 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~-~GheV~Vv~p 319 (617)
+|||++|.. .| .|-...++..+++++.+ .|++|.++..
T Consensus 1 M~kilIvy~--S~---~G~T~~lA~~ia~g~~~~~G~ev~~~~l 39 (200)
T PRK03767 1 MAKVLVLYY--SM---YGHIETMAEAVAEGAREVAGAEVTIKRV 39 (200)
T ss_pred CCeEEEEEc--CC---CCHHHHHHHHHHHHHhhcCCcEEEEEec
Confidence 479999874 33 57788999999999988 9999998864
No 226
>PRK05568 flavodoxin; Provisional
Probab=29.46 E-value=1.1e+02 Score=27.98 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=29.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+||++|-. +..|....++..+++++.+.|++|.++-.
T Consensus 2 ~~~~IvY~-----S~~GnT~~~a~~i~~~~~~~g~~v~~~~~ 38 (142)
T PRK05568 2 KKINIIYW-----SGTGNTEAMANLIAEGAKENGAEVKLLNV 38 (142)
T ss_pred CeEEEEEE-----CCCchHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 45666643 25899999999999999999999988843
No 227
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=29.40 E-value=75 Score=32.21 Aligned_cols=38 Identities=39% Similarity=0.661 Sum_probs=27.8
Q ss_pred CcEEEEEcCccCCCCCCCcHH--HHHHHHHHHHH-HCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALA-RRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa-~~GheV~Vv~p~ 320 (617)
+|+|+-|+. .-||+| +.+..||.+|+ ..||+|.+|=..
T Consensus 1 ~~~iI~v~n------~KGGvGKTT~a~nLa~~La~~~~~kVLliDlD 41 (259)
T COG1192 1 MMKIIAVAN------QKGGVGKTTTAVNLAAALAKRGGKKVLLIDLD 41 (259)
T ss_pred CCEEEEEEe------cCCCccHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 366666665 257776 56789999999 566999999433
No 228
>PRK00170 azoreductase; Reviewed
Probab=29.38 E-value=1e+02 Score=29.84 Aligned_cols=40 Identities=13% Similarity=0.122 Sum_probs=28.2
Q ss_pred CcEEEEEcCccCCCCCCCcHH-HHHHHHHHHHHHC--CCeEEEEec
Q 007130 277 VMNVILVAAECGPWSKTGGLG-DVAGALPKALARR--GHRVMVVAP 319 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg-~~v~~LakaLa~~--GheV~Vv~p 319 (617)
||||++|... |- ..+|.. ..+..+.++|.+. ||+|.++-.
T Consensus 1 Mmkil~i~gS--pr-~~~s~s~~l~~~~~~~l~~~~~~~~v~~~dL 43 (201)
T PRK00170 1 MSKVLVIKSS--IL-GDYSQSMQLGDAFIEAYKEAHPDDEVTVRDL 43 (201)
T ss_pred CCeEEEEecC--CC-CCCcHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 5999999864 42 232544 4566778888887 899988854
No 229
>PRK07023 short chain dehydrogenase; Provisional
Probab=29.34 E-value=62 Score=32.08 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=24.0
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|+|++... .||+|. .+++.|+++|++|.+++..
T Consensus 1 ~~~vlItGa-------sggiG~---~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 1 AVRAIVTGH-------SRGLGA---ALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred CceEEEecC-------CcchHH---HHHHHHHhCCCEEEEEecC
Confidence 367765542 566665 5677888999999888644
No 230
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=29.31 E-value=64 Score=35.23 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=27.9
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.++|++| ||+|.+-..++.+|.+.||+|+++...
T Consensus 98 ~~~I~Ii----------GG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIV----------GGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cceEEEE----------cCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 3788865 667777788999999999999999753
No 231
>PRK11670 antiporter inner membrane protein; Provisional
Probab=29.26 E-value=74 Score=34.74 Aligned_cols=37 Identities=38% Similarity=0.554 Sum_probs=29.0
Q ss_pred CCcEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEe
Q 007130 276 NVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~ 318 (617)
++++|+.|+. .-||+| +.+.+||.+|+++|++|-++=
T Consensus 105 ~~~~vIaV~S------~KGGVGKTT~avNLA~aLA~~G~rVlLID 143 (369)
T PRK11670 105 GVKNIIAVSS------GKGGVGKSSTAVNLALALAAEGAKVGILD 143 (369)
T ss_pred CCCEEEEEeC------CCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 3467777775 357776 567899999999999999984
No 232
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=29.26 E-value=61 Score=34.58 Aligned_cols=26 Identities=35% Similarity=0.630 Sum_probs=23.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
+||+|-.-.+.+.+|.+.||+|.|+=
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~D 31 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLD 31 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEe
Confidence 58888888899999999999999983
No 233
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=29.21 E-value=95 Score=32.59 Aligned_cols=35 Identities=31% Similarity=0.606 Sum_probs=28.0
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++.. -||+| +.+.+||.+|+++|++|.||=..
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7877664 47776 56799999999999999998543
No 234
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=29.18 E-value=49 Score=31.54 Aligned_cols=25 Identities=32% Similarity=0.359 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 296 LGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 296 lg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
-|.+....++.|.+.|++|+||.|.
T Consensus 21 GG~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 21 GGKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEcCc
Confidence 3567788999999999999999755
No 235
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=29.12 E-value=50 Score=34.73 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=27.0
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
+||.|-+-..|+..|.+.||+|+|++.+..
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 689999999999999999999999997654
No 236
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=29.01 E-value=96 Score=36.62 Aligned_cols=47 Identities=26% Similarity=0.193 Sum_probs=31.7
Q ss_pred CCCCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 007130 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (617)
Q Consensus 271 p~~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~~ 323 (617)
-.+...++||++|+++ |- -....+......|+++||+|+|++...+.
T Consensus 363 ~~~~~~~~rvLv~spH--PD----Devi~~GGTlarl~~~G~~V~vv~~TsG~ 409 (652)
T PRK02122 363 ERALPYPKRVIIFSPH--PD----DDVISMGGTFRRLVEQGHDVHVAYQTSGN 409 (652)
T ss_pred cccccCCceEEEEEeC--CC----chHhhhHHHHHHHHHCCCcEEEEEecCCc
Confidence 3344556999999874 43 23333444556788899999999776554
No 237
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=29.00 E-value=1e+02 Score=28.35 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=28.8
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeE-EEEecC
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRV-MVVAPH 320 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV-~Vv~p~ 320 (617)
|++++... +|| .+-.++...++++++.+.||+| .|+...
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 40 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFFYQ 40 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEEeh
Confidence 34555543 575 5568889999999999999995 777644
No 238
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=28.62 E-value=60 Score=26.64 Aligned_cols=28 Identities=29% Similarity=0.315 Sum_probs=22.9
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
|.|....++|..|+++|.+|+++.....
T Consensus 6 GgG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 6 GGGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp SSSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred CcCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 4456778999999999999999986643
No 239
>PRK06523 short chain dehydrogenase; Provisional
Probab=28.46 E-value=1.2e+02 Score=30.34 Aligned_cols=25 Identities=36% Similarity=0.465 Sum_probs=19.7
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|. .+++.|+++|++|.++...
T Consensus 18 s~gIG~---~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 18 TKGIGA---ATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCchhH---HHHHHHHHCCCEEEEEeCC
Confidence 577774 6888999999999888643
No 240
>PRK08655 prephenate dehydrogenase; Provisional
Probab=28.44 E-value=67 Score=35.89 Aligned_cols=33 Identities=24% Similarity=0.547 Sum_probs=24.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++| ||.|.+-..++++|.+.|++|+++...
T Consensus 1 MkI~II----------GG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISII----------GGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEE----------ecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 677765 444555567888899999999988754
No 241
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=28.37 E-value=93 Score=33.41 Aligned_cols=37 Identities=27% Similarity=0.596 Sum_probs=30.8
Q ss_pred CcEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|||++++ .-||+|. .+.++|-.|++.|..|.+|...
T Consensus 1 ~~riv~f~-------GKGGVGKTT~aaA~A~~lA~~g~kvLlvStD 39 (322)
T COG0003 1 MTRIVFFT-------GKGGVGKTTIAAATAVKLAESGKKVLLVSTD 39 (322)
T ss_pred CcEEEEEe-------cCCcccHHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 37899887 4799998 8888999999999888888644
No 242
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=28.27 E-value=1.1e+02 Score=31.87 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=30.1
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|||++++....|-... .=....++.++|.++||+|.++-+.
T Consensus 4 ~~~v~~~~g~~~~~~~~--~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 4 FGKVAVLMGGTSAEREV--SLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CcEEEEEeCCCCCCceE--eHHhHHHHHHHHHHCCCEEEEEecC
Confidence 46999999665553211 1224589999999999999998644
No 243
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=28.26 E-value=69 Score=34.14 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=27.9
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.+|||++ +||.|-.-..|++.|.++|++|+++...
T Consensus 14 ~~~~vlV----------tGatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 14 APKRWLI----------TGVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred cCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578765 4777888888999999999999888643
No 244
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=28.25 E-value=82 Score=35.89 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=29.4
Q ss_pred CCCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 273 AGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 273 ~~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+..+.++|.+| |+|.+-..|++.|++.||+|.|+-.
T Consensus 2 ~~~~~~~IG~I-----------GLG~MG~~mA~nL~~~G~~V~V~NR 37 (493)
T PLN02350 2 ASAALSRIGLA-----------GLAVMGQNLALNIAEKGFPISVYNR 37 (493)
T ss_pred CCCCCCCEEEE-----------eeHHHHHHHHHHHHhCCCeEEEECC
Confidence 34556777766 6889999999999999999999843
No 245
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=28.18 E-value=59 Score=32.58 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=23.6
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
.||.|.+-..++++|.++||+|.+++++..
T Consensus 6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~ 35 (275)
T COG0702 6 TGATGFVGGAVVRELLARGHEVRAAVRNPE 35 (275)
T ss_pred EecccchHHHHHHHHHhCCCEEEEEEeCHH
Confidence 355666667788999999999999997743
No 246
>PRK08703 short chain dehydrogenase; Provisional
Probab=27.90 E-value=1.2e+02 Score=29.82 Aligned_cols=25 Identities=44% Similarity=0.694 Sum_probs=19.4
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|.. +++.|.++|++|.++...
T Consensus 15 sggiG~~---la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 15 SQGLGEQ---VAKAYAAAGATVILVARH 39 (239)
T ss_pred CCcHHHH---HHHHHHHcCCEEEEEeCC
Confidence 5777765 678888999998887654
No 247
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=27.70 E-value=89 Score=34.55 Aligned_cols=36 Identities=36% Similarity=0.510 Sum_probs=28.4
Q ss_pred CcEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEEe
Q 007130 277 VMNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv~ 318 (617)
.|+|+-|+. .-||+|. .+.+||.+|+.+|++|.||=
T Consensus 120 ~~~vIav~n------~KGGvGKTTta~nLA~~LA~~G~rVLlID 157 (405)
T PRK13869 120 HLQVIAVTN------FKGGSGKTTTSAHLAQYLALQGYRVLAVD 157 (405)
T ss_pred CceEEEEEc------CCCCCCHHHHHHHHHHHHHhcCCceEEEc
Confidence 577777765 2577765 57899999999999999983
No 248
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=27.58 E-value=1.4e+02 Score=29.29 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=28.3
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEecC
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVAPH 320 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~-~GheV~Vv~p~ 320 (617)
..|||+.|+..- ..-|-.+.+..||.+|++ .|++|.+|=..
T Consensus 33 ~~~~vi~v~s~k----gG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 33 KNNNLIMVTSSL----PGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCCeEEEEECCC----CCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 347777776421 234455667899999996 69999998433
No 249
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=27.56 E-value=89 Score=32.68 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=27.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++++.+-.= .....+.++|.++||+|.++-+.
T Consensus 1 m~~~i~~~~~s~--------~s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTL--------YSCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcc--------hhHHHHHHHHHHcCCeEEEEehH
Confidence 899999866322 24578999999999999999765
No 250
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=27.49 E-value=1.1e+02 Score=30.05 Aligned_cols=90 Identities=16% Similarity=0.070 Sum_probs=40.4
Q ss_pred cccCCCCcEEEEcCcchhHHHHHHHHHhhhccCCCCceEEEEEeCCcccCCCCCCcccccCCCccccccccccCCCCchh
Q 007130 388 VCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPVGGEH 467 (617)
Q Consensus 388 v~~~~~pDIIHaHd~~tal~~~~l~~~~~~~~~~~~iPvV~TiH~~~~qg~~p~~~~~~~glp~~~~~~l~~~d~~~g~~ 467 (617)
++...+||++..-+. -+.|.++.... ..++|+++.-=-+ ....+ ..+++ .
T Consensus 90 fl~~~~P~~~i~~Et--ElWPnll~~a~-----~~~ip~~LvNarl------s~~s~----------~~~~~-------~ 139 (186)
T PF04413_consen 90 FLDHWRPDLLIWVET--ELWPNLLREAK-----RRGIPVVLVNARL------SERSF----------RRYRR-------F 139 (186)
T ss_dssp HHHHH--SEEEEES------HHHHHH----------S-EEEEEE------------------------------------
T ss_pred HHHHhCCCEEEEEcc--ccCHHHHHHHh-----hcCCCEEEEeeee------ccccc----------hhhhh-------h
Confidence 344567998877642 34455554432 2588987743221 11100 00111 1
Q ss_pred HHHHHHHHhhcCeeEEeCHHHHHHHHhhhcCCccccccccCCCcEEEEec
Q 007130 468 FNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVN 517 (617)
Q Consensus 468 ~~l~k~~l~~AD~VIaVS~~~a~~l~~~~~G~gL~~~l~~~~~kI~vIpN 517 (617)
-.+.+..+...|.|.+.|+..++.+.+ .| .+++++.+..|
T Consensus 140 ~~~~r~~l~~f~~i~aqs~~da~r~~~--lG--------~~~~~v~v~Gn 179 (186)
T PF04413_consen 140 PFLFRPLLSRFDRILAQSEADAERFRK--LG--------APPERVHVTGN 179 (186)
T ss_dssp -HHHHHHGGG-SEEEESSHHHHHHHHT--TT---------S--SEEE---
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHHHH--cC--------CCcceEEEeCc
Confidence 136677888999999999999888874 23 25678888765
No 251
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=27.24 E-value=81 Score=32.70 Aligned_cols=32 Identities=34% Similarity=0.478 Sum_probs=24.5
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++|. +|.+-..++.+|.+.||+|.++.+.
T Consensus 1 m~I~IIG-----------~G~mG~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 1 MKIGIVG-----------LGLIGGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred CeEEEEe-----------ecHHHHHHHHHHHHCCCEEEEEECC
Confidence 6777663 4556677889999999999988754
No 252
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=27.17 E-value=1e+02 Score=31.12 Aligned_cols=25 Identities=32% Similarity=0.582 Sum_probs=19.3
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.|++| ..|+++|.++|++|+++...
T Consensus 25 SG~iG---~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 25 TGQLG---KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred chHHH---HHHHHHHHhCCCEEEEEECc
Confidence 45455 56888999999999999743
No 253
>PRK04155 chaperone protein HchA; Provisional
Probab=27.06 E-value=1.6e+02 Score=31.10 Aligned_cols=51 Identities=20% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCCCCCCCCcEEEEEcCccCCCC-C------CCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 269 PPPLAGANVMNVILVAAECGPWS-K------TGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 269 ~~p~~~~~~MKIL~Vt~e~~P~~-~------~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
+.|-.|. +|||||.....-+. . +|=-..=+..-...|.+.|++|+++++..
T Consensus 43 ~~~~~~~--kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~G 100 (287)
T PRK04155 43 PKPYRGG--KKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLSG 100 (287)
T ss_pred CCcCCCC--CeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4466555 59999998764331 1 22222333444567889999999999864
No 254
>PRK05569 flavodoxin; Provisional
Probab=26.93 E-value=1.2e+02 Score=27.55 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=29.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+||++|-. . .+|..+.++..++++|.+.|++|.++-.
T Consensus 2 ~ki~iiY~--S---~tGnT~~iA~~i~~~~~~~g~~v~~~~~ 38 (141)
T PRK05569 2 KKVSIIYW--S---CGGNVEVLANTIADGAKEAGAEVTIKHV 38 (141)
T ss_pred CeEEEEEE--C---CCCHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 47777653 2 3799999999999999999999887743
No 255
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.92 E-value=87 Score=31.12 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=23.1
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.|+++|+. ..||+| ..+++.|+++|++|.++...
T Consensus 2 ~k~vlItG------~sg~iG---~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 2 RPVALVTG------GRRGIG---LGIARALAAAGFDLAINDRP 35 (256)
T ss_pred CcEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEecC
Confidence 35666653 244554 56888899999999887643
No 256
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=26.82 E-value=80 Score=33.41 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=23.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++|. .|.+| ..|+..|++.||+|+++.++
T Consensus 1 MkI~IiG--------aGa~G---~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 1 MKISILG--------AGSFG---TAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred CEEEEEC--------cCHHH---HHHHHHHHHCCCeEEEEecC
Confidence 7888774 34444 45777888999999988764
No 257
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=26.77 E-value=73 Score=33.64 Aligned_cols=26 Identities=31% Similarity=0.515 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|.+-.-++..|.++||+|+|+-..
T Consensus 7 GLG~MG~pmA~~L~~aG~~v~v~~r~ 32 (286)
T COG2084 7 GLGIMGSPMAANLLKAGHEVTVYNRT 32 (286)
T ss_pred cCchhhHHHHHHHHHCCCEEEEEeCC
Confidence 56778889999999999999999654
No 258
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=26.75 E-value=96 Score=32.55 Aligned_cols=32 Identities=31% Similarity=0.563 Sum_probs=24.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||.+| |+|.+-..|++.|.+.||+|.++-..
T Consensus 1 M~Ig~I-----------GlG~mG~~la~~L~~~g~~V~~~dr~ 32 (298)
T TIGR00872 1 MQLGLI-----------GLGRMGANIVRRLAKRGHDCVGYDHD 32 (298)
T ss_pred CEEEEE-----------cchHHHHHHHHHHHHCCCEEEEEECC
Confidence 677766 45677778999999999999887543
No 259
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.72 E-value=65 Score=32.73 Aligned_cols=40 Identities=28% Similarity=0.365 Sum_probs=31.9
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
|..++++. +| ..|-.+.+.+|+++|...+|+|..+.-.|.
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy~ 40 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDYL 40 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhhh
Confidence 44555664 46 678999999999999999999999876554
No 260
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=26.56 E-value=1.3e+02 Score=27.62 Aligned_cols=29 Identities=31% Similarity=0.401 Sum_probs=22.9
Q ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 292 KTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
...|....+.+||..|++.|++|.+|-..
T Consensus 10 ~g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 10 GGVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TTSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 46788889999999999999998887544
No 261
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=26.53 E-value=1.3e+02 Score=30.74 Aligned_cols=37 Identities=14% Similarity=0.281 Sum_probs=28.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
.||+.|+... ..-|-.+.+.+||.+|++.|++|.+|=
T Consensus 103 ~~vi~vts~~----~g~Gktt~a~nLA~~la~~g~~VllID 139 (274)
T TIGR03029 103 RKALAVVSAK----SGEGCSYIAANLAIVFSQLGEKTLLID 139 (274)
T ss_pred CeEEEEECCC----CCCCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 4666666521 356777889999999999999999983
No 262
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=26.44 E-value=1.2e+02 Score=30.03 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=24.2
Q ss_pred CCcHHHHHH--HHHHHHHHCCCeEEEEecCC
Q 007130 293 TGGLGDVAG--ALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 293 ~GGlg~~v~--~LakaLa~~GheV~Vv~p~y 321 (617)
+|+.+.+-. .+.+.|.+.|++|+++....
T Consensus 8 TGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~ 38 (187)
T TIGR02852 8 TGSHCTLEAVMPQLEKLVDEGAEVTPIVSET 38 (187)
T ss_pred ecHHHHHHHHHHHHHHHHhCcCEEEEEEchh
Confidence 677777765 89999999999999997553
No 263
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=26.43 E-value=1e+02 Score=30.29 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=27.0
Q ss_pred CcEEEEEcCccCCCCCCCcH-HHHHHHHHHHHHH-CCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGL-GDVAGALPKALAR-RGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGl-g~~v~~LakaLa~-~GheV~Vv~p~ 320 (617)
++||++.. +||+ .....+|++.|.+ .|++|.|++..
T Consensus 1 ~k~IllgV--------TGsiaa~ka~~l~~~L~k~~g~~V~vv~T~ 38 (185)
T PRK06029 1 MKRLIVGI--------SGASGAIYGVRLLQVLRDVGEIETHLVISQ 38 (185)
T ss_pred CCEEEEEE--------ECHHHHHHHHHHHHHHHhhcCCeEEEEECH
Confidence 36777654 4554 4557899999999 59999999754
No 264
>PLN02650 dihydroflavonol-4-reductase
Probab=25.92 E-value=1.1e+02 Score=32.47 Aligned_cols=28 Identities=29% Similarity=0.284 Sum_probs=22.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+||.|-.-..|++.|.++|++|.++...
T Consensus 11 TGatGfIGs~l~~~L~~~G~~V~~~~r~ 38 (351)
T PLN02650 11 TGASGFIGSWLVMRLLERGYTVRATVRD 38 (351)
T ss_pred eCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4666666677899999999999988644
No 265
>PRK07236 hypothetical protein; Provisional
Probab=25.87 E-value=85 Score=33.87 Aligned_cols=34 Identities=15% Similarity=0.023 Sum_probs=25.1
Q ss_pred CCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 274 ~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
.+.+|+|++|.. | ..-..+|.+|++.|++|+|+=
T Consensus 3 ~~~~~~ViIVGa---------G--~aGl~~A~~L~~~G~~v~v~E 36 (386)
T PRK07236 3 HMSGPRAVVIGG---------S--LGGLFAALLLRRAGWDVDVFE 36 (386)
T ss_pred CCCCCeEEEECC---------C--HHHHHHHHHHHhCCCCEEEEe
Confidence 355689998853 2 333567788999999999995
No 266
>PLN02208 glycosyltransferase family protein
Probab=25.74 E-value=1.3e+02 Score=33.75 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=29.5
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.++|++|.. | .-|==.-+.+||+.|+.+|++|+++++.
T Consensus 4 ~~hvv~~P~---p---aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 4 KFHAFMFPW---F---AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCEEEEecC---c---cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 468888752 3 3455566799999999999999999854
No 267
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=25.64 E-value=1.2e+02 Score=31.01 Aligned_cols=35 Identities=31% Similarity=0.597 Sum_probs=26.7
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|++.. -||+| +.+.+||.+|+++|++|.||=..
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6777663 35555 56799999999999999998433
No 268
>PRK08309 short chain dehydrogenase; Provisional
Probab=25.58 E-value=1.1e+02 Score=29.55 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEec
Q 007130 301 GALPKALARRGHRVMVVAP 319 (617)
Q Consensus 301 ~~LakaLa~~GheV~Vv~p 319 (617)
..+++.|+++|++|.+++.
T Consensus 13 g~la~~L~~~G~~V~v~~R 31 (177)
T PRK08309 13 KRVSLWLCEKGFHVSVIAR 31 (177)
T ss_pred HHHHHHHHHCcCEEEEEEC
Confidence 5699999999999988864
No 269
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=25.55 E-value=72 Score=32.99 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=19.5
Q ss_pred CcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 294 GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
||.|-.-..|++.|.++|++|.++...
T Consensus 7 G~~G~iG~~l~~~L~~~g~~V~~~~r~ 33 (328)
T TIGR03466 7 GATGFVGSAVVRLLLEQGEEVRVLVRP 33 (328)
T ss_pred CCccchhHHHHHHHHHCCCEEEEEEec
Confidence 334444455888999999999988754
No 270
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=25.54 E-value=57 Score=36.48 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=35.5
Q ss_pred EEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+|++|+-..||| ..||+..-+.+|.++|-+.-..|..|++.
T Consensus 1 ~v~l~~egtyp~-~~ggvs~w~~~~i~~~p~~~f~~~~~~~~ 41 (475)
T cd03813 1 DVCLVLEGTYPY-VRGGVSSWVHQLITGLPEHTFAVVFIGAD 41 (475)
T ss_pred CeEEEEecCCCC-cCCchhHHHHHHHhhCCCceEEEEEEecC
Confidence 589999999999 68999999999999998876777777654
No 271
>PRK06101 short chain dehydrogenase; Provisional
Probab=25.42 E-value=92 Score=30.95 Aligned_cols=34 Identities=26% Similarity=0.550 Sum_probs=23.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+.++|+. ..||+| ..+++.|+++|++|.++...
T Consensus 1 ~~~vlItG------as~giG---~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 1 MTAVLITG------ATSGIG---KQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CcEEEEEc------CCcHHH---HHHHHHHHhCCCEEEEEECC
Confidence 45555653 256666 56788889999999887643
No 272
>PRK08105 flavodoxin; Provisional
Probab=25.17 E-value=1.2e+02 Score=28.51 Aligned_cols=28 Identities=25% Similarity=0.221 Sum_probs=25.4
Q ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 292 KTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.+|-.+.++..|++.|.+.|++|.|+..
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEech
Confidence 5899999999999999999999988753
No 273
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=25.08 E-value=57 Score=35.21 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=18.9
Q ss_pred HHHHHHHHHHCCCeEEEEecC
Q 007130 300 AGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 300 v~~LakaLa~~GheV~Vv~p~ 320 (617)
+..||++|+++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 478999999999999999874
No 274
>PRK06953 short chain dehydrogenase; Provisional
Probab=24.93 E-value=80 Score=30.92 Aligned_cols=34 Identities=24% Similarity=0.497 Sum_probs=22.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+.++|+. ..||+| ..+++.|.+.|++|.++...
T Consensus 1 ~~~vlvtG------~sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 1 MKTVLIVG------ASRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred CceEEEEc------CCCchh---HHHHHHHHhCCCEEEEEECC
Confidence 55555543 245554 56778888999999888643
No 275
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.59 E-value=1.2e+02 Score=32.18 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=30.2
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||++++... +- ..+|==.....||++|.++|..+..++-.
T Consensus 1 M~V~i~~Dgg-~~-iGmGHV~R~l~LA~~l~k~~~~~~fl~k~ 41 (318)
T COG3980 1 MKVLIRCDGG-LE-IGMGHVMRTLTLARELEKRGFACLFLTKQ 41 (318)
T ss_pred CcEEEEecCC-cc-cCcchhhhHHHHHHHHHhcCceEEEeccc
Confidence 8999999854 31 34444455678999999999888877643
No 276
>PRK14571 D-alanyl-alanine synthetase A; Provisional
Probab=24.55 E-value=1.4e+02 Score=31.20 Aligned_cols=40 Identities=23% Similarity=0.113 Sum_probs=30.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|||+++.....+- .--.=....+++++|.+.||+|.++..
T Consensus 1 ~~v~v~~gg~s~e--~~~sl~s~~~i~~al~~~g~~~~~i~~ 40 (299)
T PRK14571 1 MRVALLMGGVSRE--REISLRSGERVKKALEKLGYEVTVFDV 40 (299)
T ss_pred CeEEEEeCCCCCC--ccchHHHHHHHHHHHHHcCCeEEEEcc
Confidence 7999998766553 233336778999999999999999853
No 277
>PRK08177 short chain dehydrogenase; Provisional
Probab=24.25 E-value=97 Score=30.36 Aligned_cols=25 Identities=32% Similarity=0.431 Sum_probs=19.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|. .+++.|++.|++|.++...
T Consensus 10 sg~iG~---~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 10 SRGLGL---GLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CchHHH---HHHHHHHhCCCEEEEEeCC
Confidence 566665 4688899999999888754
No 278
>PRK11914 diacylglycerol kinase; Reviewed
Probab=24.25 E-value=2e+02 Score=30.18 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=33.7
Q ss_pred CCCCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 274 ~~~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
++.+||+++|.. |.+..|.......++.+.|.+.|+++.++...+.
T Consensus 5 ~~~~~~~~iI~N---P~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~ 50 (306)
T PRK11914 5 RHEIGKVTVLTN---PLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDA 50 (306)
T ss_pred cCCCceEEEEEC---CCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCH
Confidence 455689998865 6533344566778899999999999988776553
No 279
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=24.23 E-value=1.1e+02 Score=33.94 Aligned_cols=30 Identities=37% Similarity=0.462 Sum_probs=25.8
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
..|=-..+.++++.|+++||+|+++.+...
T Consensus 15 ~~sH~~~~~~la~~L~~~gh~vt~~~~~~~ 44 (496)
T KOG1192|consen 15 GQSHLNPMLQLAKRLAERGHNVTVVTPSFN 44 (496)
T ss_pred cccHHHHHHHHHHHHHHcCCceEEEEeech
Confidence 566777889999999999999999987653
No 280
>PRK07102 short chain dehydrogenase; Provisional
Probab=24.13 E-value=98 Score=30.64 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=19.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+| ..+++.|.++|++|.++...
T Consensus 10 s~giG---~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 10 TSDIA---RACARRYAAAGARLYLAARD 34 (243)
T ss_pred CcHHH---HHHHHHHHhcCCEEEEEeCC
Confidence 45555 57888999999999888644
No 281
>PLN02214 cinnamoyl-CoA reductase
Probab=23.98 E-value=1.2e+02 Score=32.22 Aligned_cols=27 Identities=30% Similarity=0.290 Sum_probs=20.8
Q ss_pred CcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 294 GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
||.|-.-..|++.|.++||+|.++...
T Consensus 17 GatGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 17 GAGGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 555556667888999999999988654
No 282
>PRK08267 short chain dehydrogenase; Provisional
Probab=23.91 E-value=99 Score=30.97 Aligned_cols=26 Identities=19% Similarity=0.161 Sum_probs=18.5
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|.+-.-..+++.|+++|++|.++...
T Consensus 9 asg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 9 AASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 33344456788889999999988643
No 283
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=23.63 E-value=63 Score=32.55 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=24.3
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
+||.|..-..|++.|++.||+|++...+.+
T Consensus 6 i~GtGniG~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 6 IIGTGNIGSALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred EeccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence 356677778999999999999999976543
No 284
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=23.52 E-value=1.5e+02 Score=30.30 Aligned_cols=38 Identities=29% Similarity=0.287 Sum_probs=31.8
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|+.|+.. ...|-.+.+..|++.|.++|+.|-++-+.
T Consensus 1 m~vi~ivG~-----~gsGKTtl~~~l~~~L~~~G~~V~viK~~ 38 (229)
T PRK14494 1 MRAIGVIGF-----KDSGKTTLIEKILKNLKERGYRVATAKHT 38 (229)
T ss_pred CeEEEEECC-----CCChHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 778777752 47889999999999999999999999543
No 285
>PRK06180 short chain dehydrogenase; Provisional
Probab=23.49 E-value=1.1e+02 Score=31.24 Aligned_cols=25 Identities=36% Similarity=0.558 Sum_probs=18.9
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|. .+++.|+++|++|.++...
T Consensus 13 sggiG~---~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 13 SSGFGR---ALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CChHHH---HHHHHHHhCcCEEEEEeCC
Confidence 566665 5677889999999888643
No 286
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.47 E-value=1.3e+02 Score=29.97 Aligned_cols=37 Identities=30% Similarity=0.513 Sum_probs=27.6
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||+.|+. .-||+| +.+.+||.+|+++|.+|.+|=..
T Consensus 1 m~iI~v~s------~KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVG------VKGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEe------CCCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 67666654 246665 56789999999999999998443
No 287
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=23.14 E-value=99 Score=32.81 Aligned_cols=32 Identities=25% Similarity=0.167 Sum_probs=23.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|+|++... .|++| ..|++.|.++||+|+++..
T Consensus 5 k~ilItGa-------tG~IG---~~l~~~L~~~G~~V~~~~r 36 (349)
T TIGR02622 5 KKVLVTGH-------TGFKG---SWLSLWLLELGAEVYGYSL 36 (349)
T ss_pred CEEEEECC-------CChhH---HHHHHHHHHCCCEEEEEeC
Confidence 67765432 45555 6788999999999988763
No 288
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=22.95 E-value=1.1e+02 Score=31.37 Aligned_cols=38 Identities=29% Similarity=0.589 Sum_probs=30.1
Q ss_pred EEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecCCC
Q 007130 279 NVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPHYG 322 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~p~y~ 322 (617)
+|+.||. .-||+| +...+|+.+|+.+|+.|.+|=..-+
T Consensus 3 ~iIVvTS------GKGGVGKTTttAnig~aLA~~GkKv~liD~DiG 42 (272)
T COG2894 3 RIIVVTS------GKGGVGKTTTTANIGTALAQLGKKVVLIDFDIG 42 (272)
T ss_pred eEEEEec------CCCCcCccchhHHHHHHHHHcCCeEEEEecCcC
Confidence 6777775 468887 4568999999999999999965543
No 289
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=22.95 E-value=1.2e+02 Score=29.71 Aligned_cols=25 Identities=28% Similarity=0.551 Sum_probs=18.2
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|. .+++.|.++|++|.++...
T Consensus 14 sg~iG~---~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 14 SRGIGR---AIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 455554 6788888999998777644
No 290
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=22.89 E-value=1.2e+02 Score=31.75 Aligned_cols=36 Identities=22% Similarity=0.448 Sum_probs=27.5
Q ss_pred CCcEEEEEcCccCCCCCCCcHHH--HHHHHHHHHHHCCCeEEEEe
Q 007130 276 NVMNVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~--~v~~LakaLa~~GheV~Vv~ 318 (617)
..|||+-|. . -||+|. .+.+|+-+|+++|.+|-+|=
T Consensus 2 ~~~~~iai~-~------KGGvGKTt~~~nLa~~la~~g~kVLliD 39 (295)
T PRK13234 2 SKLRQIAFY-G------KGGIGKSTTSQNTLAALVEMGQKILIVG 39 (295)
T ss_pred CcceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 357766664 1 577765 56899999999999999993
No 291
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=22.86 E-value=1.1e+02 Score=33.35 Aligned_cols=35 Identities=31% Similarity=0.473 Sum_probs=24.6
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.|+|+++ ||.|..-..+++.|.++||+|.++....
T Consensus 60 ~~kVLVt----------GatG~IG~~l~~~Ll~~G~~V~~l~R~~ 94 (390)
T PLN02657 60 DVTVLVV----------GATGYIGKFVVRELVRRGYNVVAVAREK 94 (390)
T ss_pred CCEEEEE----------CCCcHHHHHHHHHHHHCCCEEEEEEech
Confidence 4787765 3444444567788889999999887543
No 292
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=22.53 E-value=2e+02 Score=24.77 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=28.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCC---CeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRG---HRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~G---heV~Vv~p~ 320 (617)
|+|++|... .|+ ..........++..+...| ++|.|+.-.
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 688888764 353 2234788888999999999 999999744
No 293
>PRK07806 short chain dehydrogenase; Provisional
Probab=22.51 E-value=1.8e+02 Score=28.68 Aligned_cols=24 Identities=33% Similarity=0.404 Sum_probs=18.6
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.||+|.. +++.|.++|++|.++..
T Consensus 15 sggiG~~---l~~~l~~~G~~V~~~~r 38 (248)
T PRK07806 15 SRGIGAD---TAKILAGAGAHVVVNYR 38 (248)
T ss_pred CCcHHHH---HHHHHHHCCCEEEEEeC
Confidence 6788764 57788899999987754
No 294
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=22.50 E-value=1.2e+02 Score=28.80 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=29.7
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.+||++|.. +-++++..|+.+|++.|.+|++++|..
T Consensus 2 gl~i~~vGD---------~~~rv~~Sl~~~~~~~g~~~~~~~P~~ 37 (158)
T PF00185_consen 2 GLKIAYVGD---------GHNRVAHSLIELLAKFGMEVVLIAPEG 37 (158)
T ss_dssp TEEEEEESS---------TTSHHHHHHHHHHHHTTSEEEEESSGG
T ss_pred CCEEEEECC---------CCChHHHHHHHHHHHcCCEEEEECCCc
Confidence 478888762 236889999999999999999999875
No 295
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=22.46 E-value=61 Score=30.56 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 296 LGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 296 lg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.|..-..||..|+++||+|+++.+.
T Consensus 7 aG~~G~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 7 AGNWGTALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp SSHHHHHHHHHHHHCTEEEEEETSC
T ss_pred cCHHHHHHHHHHHHcCCEEEEEecc
Confidence 3445568999999999999999865
No 296
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=22.12 E-value=1.4e+02 Score=32.35 Aligned_cols=37 Identities=11% Similarity=0.176 Sum_probs=28.8
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCC---eEEEE
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGH---RVMVV 317 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~Gh---eV~Vv 317 (617)
.+||||+++..+ .||=-..+..|.++|.++|. +|.++
T Consensus 4 ~~~~vlil~~~~-----G~GH~~aA~al~~~~~~~~~~~~~~~~~ 43 (391)
T PRK13608 4 QNKKILIITGSF-----GNGHMQVTQSIVNQLNDMNLDHLSVIEH 43 (391)
T ss_pred CCceEEEEECCC-----CchHHHHHHHHHHHHHhhCCCCceEEEe
Confidence 458999999753 67888889999999998864 45544
No 297
>PLN02572 UDP-sulfoquinovose synthase
Probab=22.07 E-value=1.5e+02 Score=32.98 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=23.5
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
++|+|++. ||.|-.-..|++.|.++|++|.++.
T Consensus 46 ~~k~VLVT----------GatGfIGs~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 46 KKKKVMVI----------GGDGYCGWATALHLSKRGYEVAIVD 78 (442)
T ss_pred cCCEEEEE----------CCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 44677653 4444455578899999999999874
No 298
>PRK09291 short chain dehydrogenase; Provisional
Probab=21.98 E-value=1.4e+02 Score=29.64 Aligned_cols=25 Identities=32% Similarity=0.518 Sum_probs=18.8
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|.. +++.|.++|++|.+++..
T Consensus 11 sg~iG~~---ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 11 GSGFGRE---VALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCHHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5666654 588889999999887643
No 299
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=21.97 E-value=1.7e+02 Score=30.67 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=31.1
Q ss_pred CCcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 276 ~~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.+|||++++....+- .--.-....+.+++|.+.||+|.++-.
T Consensus 2 ~~~~i~vl~gg~s~e--~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 2 KNEKIVVLYGGDSPE--REVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CCcEEEEEeCCCCCc--hHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 368999998755442 333346678899999999999988753
No 300
>PLN03007 UDP-glucosyltransferase family protein
Probab=21.76 E-value=1.5e+02 Score=33.45 Aligned_cols=39 Identities=10% Similarity=0.179 Sum_probs=29.6
Q ss_pred CcEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 277 ~MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
+++|+++.. | .-|==.-+.+||+.|+.+|++|++++...
T Consensus 5 ~~hVvlvp~---p---a~GHi~P~L~LAk~L~~rG~~VT~vtt~~ 43 (482)
T PLN03007 5 KLHILFFPF---M---AHGHMIPTLDMAKLFSSRGAKSTILTTPL 43 (482)
T ss_pred CcEEEEECC---C---ccccHHHHHHHHHHHHhCCCEEEEEECCC
Confidence 468888863 3 23444557999999999999999998653
No 301
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=21.73 E-value=1.3e+02 Score=31.50 Aligned_cols=26 Identities=35% Similarity=0.649 Sum_probs=21.3
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|.+-..+++.|.+.||+|.|+-+.
T Consensus 7 GlG~MG~~mA~~L~~~g~~v~v~dr~ 32 (301)
T PRK09599 7 GLGRMGGNMARRLLRGGHEVVGYDRN 32 (301)
T ss_pred cccHHHHHHHHHHHHCCCeEEEEECC
Confidence 56777788999999999999887543
No 302
>PRK12320 hypothetical protein; Provisional
Probab=21.73 E-value=91 Score=37.12 Aligned_cols=27 Identities=30% Similarity=0.432 Sum_probs=21.1
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
+||.|-.-..|++.|.++||+|.++..
T Consensus 6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr 32 (699)
T PRK12320 6 TDATGAVGRSVTRQLIAAGHTVSGIAQ 32 (699)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 355666666788899999999998874
No 303
>PRK06182 short chain dehydrogenase; Validated
Probab=21.68 E-value=1.7e+02 Score=29.66 Aligned_cols=25 Identities=28% Similarity=0.444 Sum_probs=19.4
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+|.. +++.|.++|++|.++...
T Consensus 12 sggiG~~---la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 12 SSGIGKA---TARRLAAQGYTVYGAARR 36 (273)
T ss_pred CChHHHH---HHHHHHHCCCEEEEEeCC
Confidence 5777664 778889999999887644
No 304
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=21.67 E-value=1.3e+02 Score=31.61 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=25.4
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|+|++|. +|.+-..++..|++.||+|+++-+.
T Consensus 3 ~~V~VIG-----------~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 3 GSVAIIG-----------AGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred cEEEEEC-----------ccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 6777663 5567778899999999999999654
No 305
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=21.64 E-value=1.1e+02 Score=31.34 Aligned_cols=26 Identities=38% Similarity=0.635 Sum_probs=22.2
Q ss_pred CCcHHH--HHHHHHHHHHHCCCeEEEEe
Q 007130 293 TGGLGD--VAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 293 ~GGlg~--~v~~LakaLa~~GheV~Vv~ 318 (617)
-||+|. .+.+||-+|+++|.+|.||=
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID 36 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVG 36 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEe
Confidence 577775 57899999999999999993
No 306
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=21.38 E-value=1.1e+02 Score=32.09 Aligned_cols=25 Identities=36% Similarity=0.559 Sum_probs=20.7
Q ss_pred cHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 295 GLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 295 Glg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|+|.+-..+++.|.+.||+|.|+-.
T Consensus 7 GlG~MG~~ma~~L~~~G~~v~v~~~ 31 (292)
T PRK15059 7 GLGIMGTPMAINLARAGHQLHVTTI 31 (292)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4667778899999999999988753
No 307
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=21.37 E-value=84 Score=31.21 Aligned_cols=25 Identities=32% Similarity=0.612 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 297 GDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 297 g~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
|.+....++.|.+.|++|+|+.|..
T Consensus 19 G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 19 GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 6677889999999999999998753
No 308
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=21.18 E-value=1.4e+02 Score=31.18 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=25.0
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHC---CCeEEEEecCCCC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR---GHRVMVVAPHYGN 323 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~---GheV~Vv~p~y~~ 323 (617)
||||+....=. ..-| +..|+++|.+. |++|+|++|....
T Consensus 1 M~ILlTNDDGI---~a~G----l~aL~~~l~~~~~~~~~V~VVAP~~eq 42 (261)
T PRK13931 1 MRILITNDDGI---NAPG----LEVLEQIATELAGPDGEVWTVAPAFEQ 42 (261)
T ss_pred CeEEEEcCCCC---CCHh----HHHHHHHHHHhccCCCeEEEEeCCCCC
Confidence 89998776421 1223 45566666654 4799999997543
No 309
>PRK10818 cell division inhibitor MinD; Provisional
Probab=21.08 E-value=1.8e+02 Score=29.68 Aligned_cols=37 Identities=27% Similarity=0.593 Sum_probs=28.3
Q ss_pred cEEEEEcCccCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg--~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||+-|+. .-||+| +.+.+||.+|+++|.+|.+|=..
T Consensus 2 ~kviav~s------~KGGvGKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 2 ARIIVVTS------GKGGVGKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred ceEEEEEe------CCCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 57777765 256665 56789999999999999998544
No 310
>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase. Flavodoxins are electron-transfer proteins that function in various electron transport systems. They bind one FMN molecule, which serves as a redox-active prosthetic group [] and are functionally interchangeable with ferredoxins. They have been isolated from prokaryotes, cyanobacteria, and some eukaryotic algae. Nitric oxide synthase (1.14.13.39 from EC) produces nitric oxide from L-arginie and NADPH. Nitric oxide acts as a messenger molecule in the body.; GO: 0010181 FMN binding, 0016491 oxidoreductase activity; PDB: 2WC1_A 2FVX_A 2FOX_A 6NUL_A 1FVX_A 2FAX_A 1FLN_A 1FLA_A 4NLL_A 2FDX_A ....
Probab=21.07 E-value=1.8e+02 Score=26.31 Aligned_cols=30 Identities=33% Similarity=0.378 Sum_probs=27.0
Q ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 007130 292 KTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (617)
Q Consensus 292 ~~GGlg~~v~~LakaLa~~GheV~Vv~p~y 321 (617)
.+|-.+.++..++++|.++|++|.++....
T Consensus 6 ~tG~te~~A~~ia~~l~~~g~~~~~~~~~~ 35 (143)
T PF00258_consen 6 MTGNTEKMAEAIAEGLRERGVEVRVVDLDD 35 (143)
T ss_dssp SSSHHHHHHHHHHHHHHHTTSEEEEEEGGG
T ss_pred CchhHHHHHHHHHHHHHHcCCceeeechhh
Confidence 589999999999999999999999997653
No 311
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=21.03 E-value=1.1e+02 Score=30.22 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=22.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
||.++|+. ..||+|. .+++.|+++|++|.++.
T Consensus 2 ~k~ilItG------as~giG~---~la~~l~~~g~~v~~~~ 33 (248)
T PRK06947 2 RKVVLITG------ASRGIGR---ATAVLAAARGWSVGINY 33 (248)
T ss_pred CcEEEEeC------CCCcHHH---HHHHHHHHCCCEEEEEe
Confidence 55566653 2566664 58888999999987664
No 312
>PRK06194 hypothetical protein; Provisional
Probab=20.99 E-value=1.4e+02 Score=30.27 Aligned_cols=24 Identities=21% Similarity=0.351 Sum_probs=18.3
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
.||+|. .|++.|.++|++|.++..
T Consensus 15 sggIG~---~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 15 ASGFGL---AFARIGAALGMKLVLADV 38 (287)
T ss_pred ccHHHH---HHHHHHHHCCCEEEEEeC
Confidence 456654 578889999999987754
No 313
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=20.73 E-value=1.5e+02 Score=29.02 Aligned_cols=28 Identities=29% Similarity=0.279 Sum_probs=22.9
Q ss_pred CCcHH-HHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLG-DVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg-~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
+||++ ....+|.+.|.+.|++|.|++..
T Consensus 7 tGsiaa~ka~~lir~L~~~g~~V~vv~T~ 35 (181)
T TIGR00421 7 TGASGVIYGIRLLEVLKEAGVEVHLVISD 35 (181)
T ss_pred ECHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 56654 45689999999999999999755
No 314
>PRK06753 hypothetical protein; Provisional
Probab=20.64 E-value=1.1e+02 Score=32.76 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=21.6
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~ 318 (617)
|+|++|.. |+ .-..+|.+|++.|++|+|+=
T Consensus 1 ~~V~IvGg---------G~--aGl~~A~~L~~~g~~v~v~E 30 (373)
T PRK06753 1 MKIAIIGA---------GI--GGLTAAALLQEQGHEVKVFE 30 (373)
T ss_pred CEEEEECC---------CH--HHHHHHHHHHhCCCcEEEEe
Confidence 78888753 32 23455778899999999984
No 315
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=20.62 E-value=1.1e+02 Score=31.39 Aligned_cols=26 Identities=31% Similarity=0.685 Sum_probs=21.9
Q ss_pred CCcHH--HHHHHHHHHHHHCCCeEEEEe
Q 007130 293 TGGLG--DVAGALPKALARRGHRVMVVA 318 (617)
Q Consensus 293 ~GGlg--~~v~~LakaLa~~GheV~Vv~ 318 (617)
-||+| +.+.+||-+|+++|.+|.+|=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD 36 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVG 36 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 47776 456999999999999999993
No 316
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=20.49 E-value=93 Score=34.25 Aligned_cols=32 Identities=31% Similarity=0.368 Sum_probs=23.7
Q ss_pred cEEEEEcCccCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 278 MKIL~Vt~e~~P~~~~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
|||.+|.. |.+-..++..|++.||+|+++-..
T Consensus 1 mkI~vIGl-----------G~~G~~lA~~La~~G~~V~~~d~~ 32 (411)
T TIGR03026 1 MKIAVIGL-----------GYVGLPLAALLADLGHEVTGVDID 32 (411)
T ss_pred CEEEEECC-----------CchhHHHHHHHHhcCCeEEEEECC
Confidence 67887753 334467888999999999988643
No 317
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=20.24 E-value=1.4e+02 Score=29.35 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=19.2
Q ss_pred CcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 294 GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
||.+..-..+++.|.++|+.|.++...
T Consensus 9 G~s~~iG~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 9 GAKRGIGSAIARELLNDGYRVIATYFS 35 (245)
T ss_pred CCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 344444456888999999998777644
No 318
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=20.11 E-value=1.9e+02 Score=29.06 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=23.7
Q ss_pred EEEEEcCccCCCCCC-CcHHHHHHHHHHHHHHCCCeEEEEec
Q 007130 279 NVILVAAECGPWSKT-GGLGDVAGALPKALARRGHRVMVVAP 319 (617)
Q Consensus 279 KIL~Vt~e~~P~~~~-GGlg~~v~~LakaLa~~GheV~Vv~p 319 (617)
|+++|+.- .. +|+| ..+++.|+++|++|.++..
T Consensus 11 k~~lItGa-----s~g~GIG---~a~a~~la~~G~~v~l~~r 44 (258)
T PRK07533 11 KRGLVVGI-----ANEQSIA---WGCARAFRALGAELAVTYL 44 (258)
T ss_pred CEEEEECC-----CCCCcHH---HHHHHHHHHcCCEEEEEeC
Confidence 67777742 12 3777 5688889999999877753
No 319
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=20.02 E-value=1.3e+02 Score=29.67 Aligned_cols=25 Identities=36% Similarity=0.426 Sum_probs=19.3
Q ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 007130 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (617)
Q Consensus 293 ~GGlg~~v~~LakaLa~~GheV~Vv~p~ 320 (617)
.||+| ..|++.|.++|++|.+++..
T Consensus 10 ~g~lG---~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 10 ASGIG---LAIALALAAAGANVVVNDLG 34 (255)
T ss_pred cchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555 57889999999998888654
Done!