Query 007133
Match_columns 617
No_of_seqs 467 out of 2867
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 19:23:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 2.1E-76 4.5E-81 621.2 38.9 397 172-611 43-451 (452)
2 PLN02533 probable purple acid 100.0 1E-68 2.2E-73 581.3 44.1 378 169-605 39-425 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 5.7E-47 1.2E-51 394.3 31.9 282 290-597 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 9.1E-34 2E-38 299.0 26.8 269 291-602 26-334 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 8E-31 1.7E-35 270.7 23.4 247 292-587 1-277 (277)
6 KOG2679 Purple (tartrate-resis 99.9 9.6E-27 2.1E-31 227.5 16.8 259 288-598 40-330 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 99.9 3.7E-26 8E-31 234.2 21.2 240 290-582 3-260 (262)
8 cd07402 MPP_GpdQ Enterobacter 99.9 3E-22 6.4E-27 202.2 19.7 228 293-573 1-237 (240)
9 PF09423 PhoD: PhoD-like phosp 99.9 4.3E-21 9.4E-26 211.8 27.4 308 242-581 60-453 (453)
10 cd07396 MPP_Nbla03831 Homo sap 99.9 2.4E-21 5.3E-26 199.2 20.3 207 292-545 1-247 (267)
11 PRK11148 cyclic 3',5'-adenosin 99.8 1.8E-19 4E-24 186.1 22.8 247 280-583 5-260 (275)
12 COG3540 PhoD Phosphodiesterase 99.8 1.7E-19 3.6E-24 189.6 18.7 242 242-508 97-418 (522)
13 cd07401 MPP_TMEM62_N Homo sapi 99.8 2.2E-19 4.7E-24 183.5 18.3 195 294-514 2-216 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.8 9.2E-19 2E-23 174.2 14.5 159 292-512 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.7 4.8E-16 1E-20 162.2 17.2 180 320-511 57-264 (296)
16 cd08163 MPP_Cdc1 Saccharomyces 99.6 2E-15 4.3E-20 154.0 15.4 162 330-511 44-231 (257)
17 PF00149 Metallophos: Calcineu 99.6 1.2E-16 2.6E-21 148.8 5.4 198 292-508 1-200 (200)
18 cd07383 MPP_Dcr2 Saccharomyces 99.6 5.2E-15 1.1E-19 145.5 15.0 166 291-512 2-180 (199)
19 cd07393 MPP_DR1119 Deinococcus 99.6 1E-14 2.2E-19 147.0 14.7 201 294-542 1-226 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 7.9E-13 1.7E-17 142.5 24.1 96 410-511 290-395 (496)
21 PF14008 Metallophos_C: Iron/z 99.5 4.9E-14 1.1E-18 111.9 6.9 62 532-593 1-62 (62)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.5 9.3E-13 2E-17 127.4 17.0 167 294-509 1-174 (188)
23 COG1409 Icc Predicted phosphoh 99.4 4.9E-12 1.1E-16 130.9 17.4 184 292-508 1-193 (301)
24 TIGR03729 acc_ester putative p 99.4 3.8E-12 8.2E-17 128.9 16.1 185 293-509 1-222 (239)
25 cd07385 MPP_YkuE_C Bacillus su 99.4 2.9E-12 6.4E-17 127.8 13.7 171 292-516 2-174 (223)
26 cd07400 MPP_YydB Bacillus subt 99.4 3.8E-12 8.1E-17 118.3 12.7 125 294-511 1-128 (144)
27 TIGR03768 RPA4764 metallophosp 99.4 1.5E-11 3.2E-16 131.4 18.7 97 410-508 291-411 (492)
28 cd07388 MPP_Tt1561 Thermus the 99.3 2.8E-11 6.1E-16 120.7 17.0 175 291-506 4-189 (224)
29 cd07404 MPP_MS158 Microscilla 99.3 1.9E-11 4.1E-16 116.5 11.3 150 294-509 1-150 (166)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.3 3.4E-11 7.3E-16 119.8 12.0 197 293-510 1-203 (223)
31 PRK11340 phosphodiesterase Yae 99.2 6.1E-10 1.3E-14 114.9 18.3 168 291-515 49-221 (271)
32 KOG1432 Predicted DNA repair e 99.1 2E-09 4.4E-14 110.1 17.0 88 289-377 51-147 (379)
33 PF12850 Metallophos_2: Calcin 99.1 1.5E-09 3.2E-14 101.6 14.3 153 292-571 1-153 (156)
34 cd00838 MPP_superfamily metall 99.0 2.7E-09 5.8E-14 95.5 12.0 96 329-512 24-119 (131)
35 cd00841 MPP_YfcE Escherichia c 98.9 4.2E-08 9.1E-13 92.2 15.4 59 293-377 1-59 (155)
36 cd07397 MPP_DevT Myxococcus xa 98.9 5.1E-08 1.1E-12 97.8 15.3 64 292-378 1-64 (238)
37 COG1408 Predicted phosphohydro 98.8 1.9E-08 4.1E-13 104.0 11.4 78 289-378 42-119 (284)
38 cd07379 MPP_239FB Homo sapiens 98.8 2.7E-08 6E-13 91.5 11.2 117 293-509 1-117 (135)
39 cd07394 MPP_Vps29 Homo sapiens 98.7 2E-06 4.3E-11 83.2 20.4 65 293-377 1-65 (178)
40 PRK05340 UDP-2,3-diacylglucosa 98.7 6E-08 1.3E-12 98.4 10.1 181 293-510 2-201 (241)
41 TIGR00040 yfcE phosphoesterase 98.7 3.9E-07 8.4E-12 86.2 14.9 63 292-376 1-63 (158)
42 cd08166 MPP_Cdc1_like_1 unchar 98.7 5E-08 1.1E-12 94.9 8.7 48 330-377 41-93 (195)
43 KOG3770 Acid sphingomyelinase 98.6 3.1E-07 6.7E-12 100.8 13.8 177 321-511 200-407 (577)
44 PF14582 Metallophos_3: Metall 98.6 2.9E-07 6.3E-12 89.9 10.4 177 292-509 6-219 (255)
45 COG2129 Predicted phosphoester 98.6 5.2E-06 1.1E-10 81.4 19.1 175 291-510 3-189 (226)
46 cd08165 MPP_MPPE1 human MPPE1 98.6 4.6E-07 9.9E-12 85.7 11.6 56 321-377 29-89 (156)
47 cd07403 MPP_TTHA0053 Thermus t 98.6 2.5E-07 5.4E-12 84.7 9.4 49 457-511 58-106 (129)
48 COG1768 Predicted phosphohydro 98.6 1.1E-06 2.4E-11 82.4 13.2 184 293-512 2-203 (230)
49 cd07384 MPP_Cdc1_like Saccharo 98.5 2.5E-07 5.5E-12 88.8 7.4 56 321-377 36-100 (171)
50 cd07389 MPP_PhoD Bacillus subt 98.5 3.6E-07 7.7E-12 91.7 8.1 137 330-511 28-207 (228)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 2.4E-06 5.3E-11 86.0 13.4 74 295-377 2-81 (231)
52 PRK09453 phosphodiesterase; Pr 98.4 1.3E-05 2.7E-10 77.8 17.6 71 292-377 1-76 (182)
53 TIGR00583 mre11 DNA repair pro 98.4 6.6E-06 1.4E-10 89.2 15.0 84 291-377 3-123 (405)
54 cd07410 MPP_CpdB_N Escherichia 98.3 2.4E-05 5.2E-10 81.0 18.3 198 292-509 1-231 (277)
55 cd00845 MPP_UshA_N_like Escher 98.3 6E-06 1.3E-10 84.1 12.0 188 292-510 1-208 (252)
56 cd07406 MPP_CG11883_N Drosophi 98.3 1.1E-05 2.4E-10 82.7 13.8 186 292-509 1-208 (257)
57 cd08164 MPP_Ted1 Saccharomyces 98.3 3.2E-06 7E-11 82.2 8.9 49 329-378 42-112 (193)
58 cd07382 MPP_DR1281 Deinococcus 98.2 7E-05 1.5E-09 76.4 17.9 197 293-545 1-201 (255)
59 cd07398 MPP_YbbF-LpxH Escheric 98.2 5.4E-06 1.2E-10 82.2 8.1 74 295-377 1-82 (217)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.1 8E-05 1.7E-09 76.4 16.1 165 330-513 27-234 (262)
61 TIGR00282 metallophosphoestera 98.1 0.00014 3E-09 74.5 17.5 195 292-545 1-204 (266)
62 cd07412 MPP_YhcR_N Bacillus su 98.0 0.00037 8E-09 72.7 18.4 85 292-378 1-89 (288)
63 cd07411 MPP_SoxB_N Thermus the 97.9 0.00015 3.3E-09 74.5 13.3 189 292-508 1-219 (264)
64 cd07405 MPP_UshA_N Escherichia 97.9 0.00029 6.4E-09 73.3 14.6 201 292-509 1-222 (285)
65 cd07425 MPP_Shelphs Shewanella 97.8 4.8E-05 1E-09 75.5 7.7 65 295-377 1-80 (208)
66 cd07407 MPP_YHR202W_N Saccharo 97.8 0.00037 8E-09 72.4 14.4 197 291-508 5-231 (282)
67 COG0622 Predicted phosphoester 97.8 0.0018 3.9E-08 62.1 18.1 64 292-377 2-65 (172)
68 TIGR00619 sbcd exonuclease Sbc 97.8 3.8E-05 8.2E-10 78.5 6.1 83 292-377 1-88 (253)
69 cd07408 MPP_SA0022_N Staphyloc 97.7 0.00048 1E-08 70.6 13.8 80 292-378 1-83 (257)
70 KOG3662 Cell division control 97.7 0.00018 3.8E-09 77.0 10.2 128 289-431 46-183 (410)
71 cd07409 MPP_CD73_N CD73 ecto-5 97.7 0.00065 1.4E-08 70.6 14.3 79 412-509 131-219 (281)
72 COG0420 SbcD DNA repair exonuc 97.7 5.8E-05 1.3E-09 82.1 6.0 84 292-377 1-88 (390)
73 PRK09419 bifunctional 2',3'-cy 97.6 0.00087 1.9E-08 82.7 15.8 196 288-509 657-883 (1163)
74 PRK10966 exonuclease subunit S 97.6 9.6E-05 2.1E-09 80.7 6.3 83 292-377 1-87 (407)
75 PHA02546 47 endonuclease subun 97.6 9.3E-05 2E-09 79.0 6.0 82 292-377 1-89 (340)
76 cd07380 MPP_CWF19_N Schizosacc 97.6 0.0002 4.4E-09 67.1 7.5 54 320-375 15-68 (150)
77 PRK09558 ushA bifunctional UDP 97.5 0.0014 3E-08 74.7 15.2 199 289-509 32-258 (551)
78 COG2908 Uncharacterized protei 97.5 0.00049 1.1E-08 68.4 9.2 73 296-377 2-80 (237)
79 COG0737 UshA 5'-nucleotidase/2 97.3 0.0027 5.8E-08 71.8 13.5 204 287-508 22-247 (517)
80 TIGR01530 nadN NAD pyrophospha 97.1 0.0083 1.8E-07 68.3 14.9 83 292-378 1-95 (550)
81 cd07391 MPP_PF1019 Pyrococcus 97.0 0.00088 1.9E-08 64.3 5.3 47 330-377 40-88 (172)
82 TIGR00024 SbcD_rel_arch putati 96.9 0.0015 3.2E-08 65.6 6.1 84 292-377 15-102 (225)
83 cd08162 MPP_PhoA_N Synechococc 96.9 0.0086 1.9E-07 63.2 12.0 39 452-509 206-245 (313)
84 cd07386 MPP_DNA_pol_II_small_a 96.9 0.0014 3E-08 66.5 5.8 76 295-377 2-94 (243)
85 cd07423 MPP_PrpE Bacillus subt 96.8 0.0024 5.1E-08 64.5 6.7 67 293-377 2-80 (234)
86 PRK00166 apaH diadenosine tetr 96.8 0.0025 5.3E-08 65.9 6.9 65 293-377 2-69 (275)
87 cd07424 MPP_PrpA_PrpB PrpA and 96.8 0.0029 6.2E-08 62.6 7.1 63 293-377 2-67 (207)
88 PHA02239 putative protein phos 96.8 0.0018 3.9E-08 65.5 5.6 67 293-377 2-73 (235)
89 cd07390 MPP_AQ1575 Aquifex aeo 96.8 0.0015 3.2E-08 62.5 4.6 48 324-377 35-82 (168)
90 PRK04036 DNA polymerase II sma 96.8 0.004 8.7E-08 69.9 8.6 81 290-377 242-343 (504)
91 COG1692 Calcineurin-like phosp 96.7 0.2 4.3E-06 50.2 18.8 198 292-544 1-202 (266)
92 PRK11907 bifunctional 2',3'-cy 96.7 0.024 5.1E-07 66.9 14.3 96 281-378 105-214 (814)
93 PRK13625 bis(5'-nucleosyl)-tet 96.7 0.0036 7.9E-08 63.7 6.7 66 293-376 2-78 (245)
94 PRK09418 bifunctional 2',3'-cy 96.6 0.06 1.3E-06 63.4 16.8 87 291-378 39-143 (780)
95 cd07413 MPP_PA3087 Pseudomonas 96.5 0.0059 1.3E-07 61.2 6.8 66 294-377 1-76 (222)
96 COG4186 Predicted phosphoester 96.4 0.015 3.3E-07 53.9 8.2 80 293-377 5-86 (186)
97 PRK09419 bifunctional 2',3'-cy 96.3 0.029 6.3E-07 69.5 12.9 48 452-509 233-281 (1163)
98 PF13277 YmdB: YmdB-like prote 96.3 0.047 1E-06 55.1 11.8 168 330-545 26-199 (253)
99 PRK11439 pphA serine/threonine 96.3 0.0085 1.8E-07 59.8 6.4 63 293-377 18-83 (218)
100 PRK09968 serine/threonine-spec 96.2 0.012 2.7E-07 58.7 7.1 62 293-376 16-80 (218)
101 PF00041 fn3: Fibronectin type 96.1 0.02 4.4E-07 46.9 7.0 74 173-267 2-77 (85)
102 cd07422 MPP_ApaH Escherichia c 96.0 0.013 2.9E-07 59.9 6.4 63 295-377 2-67 (257)
103 cd07387 MPP_PolD2_C PolD2 (DNA 96.0 0.13 2.8E-06 52.6 13.4 108 331-448 42-176 (257)
104 cd07421 MPP_Rhilphs Rhilph pho 96.0 0.021 4.6E-07 59.2 7.7 67 293-377 3-80 (304)
105 COG5555 Cytolysin, a secreted 95.6 0.014 3E-07 59.1 4.5 176 332-511 127-337 (392)
106 PRK09420 cpdB bifunctional 2', 95.6 0.14 3.1E-06 59.4 13.6 87 290-378 24-123 (649)
107 cd00144 MPP_PPP_family phospho 95.6 0.027 5.8E-07 56.0 6.5 65 295-377 1-68 (225)
108 TIGR01390 CycNucDiestase 2',3' 95.5 0.14 3E-06 59.2 12.8 85 292-378 3-100 (626)
109 cd07381 MPP_CapA CapA and rela 95.3 0.32 7E-06 49.1 13.2 61 440-511 162-222 (239)
110 TIGR00668 apaH bis(5'-nucleosy 95.1 0.043 9.3E-07 56.6 6.3 65 293-377 2-69 (279)
111 KOG4221 Receptor mediating net 94.9 0.52 1.1E-05 56.5 15.0 134 131-283 571-711 (1381)
112 KOG2863 RNA lariat debranching 94.6 0.18 3.9E-06 52.9 9.3 179 292-507 1-229 (456)
113 cd07420 MPP_RdgC Drosophila me 94.5 0.078 1.7E-06 56.0 6.6 67 293-377 52-123 (321)
114 KOG0196 Tyrosine kinase, EPH ( 94.3 0.5 1.1E-05 54.6 12.6 82 183-285 454-537 (996)
115 COG1407 Predicted ICC-like pho 94.1 0.09 1.9E-06 52.7 5.7 83 292-377 20-110 (235)
116 KOG3513 Neural cell adhesion m 93.3 4.5 9.7E-05 48.7 18.4 192 54-286 719-917 (1051)
117 cd07416 MPP_PP2B PP2B, metallo 93.2 0.21 4.5E-06 52.6 6.9 67 293-377 44-114 (305)
118 cd00063 FN3 Fibronectin type 3 92.8 0.89 1.9E-05 36.5 8.9 37 244-280 55-91 (93)
119 cd07418 MPP_PP7 PP7, metalloph 92.2 0.3 6.4E-06 52.7 6.5 67 293-377 67-138 (377)
120 smart00156 PP2Ac Protein phosp 92.1 0.43 9.3E-06 49.3 7.4 67 293-377 29-99 (271)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 91.8 0.37 8E-06 50.2 6.5 67 293-377 43-113 (285)
122 cd07419 MPP_Bsu1_C Arabidopsis 91.0 0.54 1.2E-05 49.6 6.9 23 483-505 240-262 (311)
123 COG1311 HYS2 Archaeal DNA poly 91.0 0.6 1.3E-05 51.2 7.2 82 290-377 224-321 (481)
124 cd07414 MPP_PP1_PPKL PP1, PPKL 90.9 0.48 1E-05 49.5 6.3 24 484-507 221-244 (293)
125 PTZ00239 serine/threonine prot 90.5 0.65 1.4E-05 48.8 6.8 66 294-377 45-114 (303)
126 cd07417 MPP_PP5_C PP5, C-termi 90.5 0.62 1.3E-05 49.2 6.7 24 484-507 232-255 (316)
127 KOG3325 Membrane coat complex 90.5 2.9 6.3E-05 38.8 10.0 86 485-597 96-182 (183)
128 PTZ00244 serine/threonine-prot 89.4 0.69 1.5E-05 48.4 6.0 24 484-507 223-246 (294)
129 PTZ00480 serine/threonine-prot 89.0 0.95 2.1E-05 47.9 6.7 25 483-507 229-253 (320)
130 KOG2310 DNA repair exonuclease 88.9 1.3 2.8E-05 49.1 7.7 53 291-346 13-67 (646)
131 PF07888 CALCOCO1: Calcium bin 87.7 3.9 8.4E-05 46.0 10.6 99 68-189 22-132 (546)
132 KOG4419 5' nucleotidase [Nucle 86.0 5.4 0.00012 45.0 10.5 56 436-508 211-269 (602)
133 PF09587 PGA_cap: Bacterial ca 86.0 2.4 5.2E-05 43.1 7.5 64 438-512 169-232 (250)
134 smart00060 FN3 Fibronectin typ 84.7 7.4 0.00016 29.8 8.4 22 245-266 56-77 (83)
135 PF04042 DNA_pol_E_B: DNA poly 81.9 2.1 4.6E-05 42.0 4.9 74 294-377 1-91 (209)
136 smart00854 PGA_cap Bacterial c 81.5 3.8 8.1E-05 41.4 6.6 59 442-511 162-220 (239)
137 KOG3947 Phosphoesterases [Gene 75.5 6.7 0.00014 40.2 6.1 64 291-378 61-127 (305)
138 KOG4221 Receptor mediating net 74.8 63 0.0014 39.8 14.6 128 129-283 479-611 (1381)
139 PF10179 DUF2369: Uncharacteri 73.8 74 0.0016 33.4 13.4 19 248-266 262-280 (300)
140 PTZ00235 DNA polymerase epsilo 69.7 16 0.00035 38.0 7.4 75 291-376 27-121 (291)
141 KOG3513 Neural cell adhesion m 47.9 1.6E+02 0.0035 36.0 11.6 133 132-287 577-716 (1051)
142 KOG2476 Uncharacterized conser 47.7 26 0.00056 38.5 4.6 70 292-374 6-75 (528)
143 KOG0372 Serine/threonine speci 47.5 46 0.001 33.8 6.0 67 294-377 45-114 (303)
144 TIGR02855 spore_yabG sporulati 44.3 38 0.00083 34.8 5.0 50 440-507 115-165 (283)
145 KOG0374 Serine/threonine speci 42.0 31 0.00067 36.8 4.2 24 484-507 232-255 (331)
146 PF12751 Vac7: Vacuolar segreg 36.8 98 0.0021 33.5 6.9 45 3-48 300-345 (387)
147 PF05582 Peptidase_U57: YabG p 36.7 57 0.0012 33.7 4.9 50 440-507 116-166 (287)
148 PF10179 DUF2369: Uncharacteri 33.1 1.3E+02 0.0029 31.5 7.1 20 247-266 16-35 (300)
149 PF09294 Interfer-bind: Interf 32.6 56 0.0012 27.9 3.7 20 246-265 67-86 (106)
150 TIGR02039 CysD sulfate adenyly 30.8 1.8E+02 0.004 30.4 7.7 82 420-507 49-130 (294)
151 cd02856 Glycogen_debranching_e 30.2 69 0.0015 27.6 3.8 23 242-264 43-65 (103)
152 cd01987 USP_OKCHK USP domain i 29.0 3.3E+02 0.0071 23.5 8.2 23 485-507 74-96 (124)
153 KOG0373 Serine/threonine speci 27.9 54 0.0012 32.6 3.0 66 294-377 48-117 (306)
154 KOG0371 Serine/threonine prote 27.3 1.3E+02 0.0027 31.0 5.4 66 294-377 62-131 (319)
155 KOG4258 Insulin/growth factor 26.5 2.5E+02 0.0054 33.6 8.3 117 177-300 492-623 (1025)
156 cd02860 Pullulanase_N_term Pul 25.0 92 0.002 26.6 3.7 24 242-265 45-68 (100)
157 cd02852 Isoamylase_N_term Isoa 25.0 86 0.0019 27.7 3.6 22 243-264 48-69 (119)
158 cd02853 MTHase_N_term Maltooli 24.9 96 0.0021 25.6 3.7 20 244-264 40-59 (85)
159 PF07353 Uroplakin_II: Uroplak 22.5 1.3E+02 0.0027 28.5 4.1 18 249-266 105-122 (184)
160 COG2248 Predicted hydrolase (m 22.0 2.1E+02 0.0045 29.4 5.8 72 291-377 176-250 (304)
161 PRK05253 sulfate adenylyltrans 21.1 3.6E+02 0.0078 28.3 7.8 82 421-508 58-139 (301)
162 PF06874 FBPase_2: Firmicute f 20.5 53 0.0011 37.7 1.5 49 323-378 177-225 (640)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-76 Score=621.16 Aligned_cols=397 Identities=43% Similarity=0.744 Sum_probs=330.0
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCccee-cccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHS-PAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~-~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
++|.|+||+++...++|+|+|.|... ....|+||...+..... ..+.. .-+|+.... +|+..|++|+|+|
T Consensus 43 ~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~~~ 113 (452)
T KOG1378|consen 43 NSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDAVM 113 (452)
T ss_pred CCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeeeee
Confidence 68999999999988899999999865 34899999765432211 11111 112333222 5678999999999
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS 330 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 330 (617)
++|+|+|+|+||||++ ..||++++|+|+| +++.+.+|+++||||...... ++.....+..
T Consensus 114 ~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~~ 173 (452)
T KOG1378|consen 114 KNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEENL 173 (452)
T ss_pred cCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhccc
Confidence 9999999999999986 3499999999998 455779999999999875421 2333334335
Q ss_pred CCcEEEEcCccccCCCcH-hHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCC--
Q 007133 331 NIDIVFHIGDITYANGYI-SQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAE-- 407 (617)
Q Consensus 331 ~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~-- 407 (617)
++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |..+|..||.||.+
T Consensus 174 k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~s 242 (452)
T KOG1378|consen 174 KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNSS 242 (452)
T ss_pred CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCcC
Confidence 799999999999999998 6999999999999999999999999999976543 45688999999954
Q ss_pred -CCCCeEEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCC-CCCCCCccchh
Q 007133 408 -NRAKFWYSTDYGMFHFCIADTEHDW--REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYW-YGQEGSFEEPM 483 (617)
Q Consensus 408 -~~~~~yYsfd~G~v~fi~LDt~~~~--~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~-~~~~g~~~~~~ 483 (617)
+..++||||++|+||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |++... +..+|.. +.+
T Consensus 243 ~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~~ 320 (452)
T KOG1378|consen 243 ESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ESM 320 (452)
T ss_pred CCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hhh
Confidence 3346999999999999999999985 456899999999999999888999999999999 666542 3445533 244
Q ss_pred hHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCC--CCCCCCCCCCCcceeee
Q 007133 484 GRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGS--HLSDFSEVTPNWSLYRD 561 (617)
Q Consensus 484 ~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~--~l~~~~~~~~~ws~~~~ 561 (617)
|..||+||.|++||++|+||+|+|||+||+||.+|....+..+..++.||+||++|.||+ ++..+..++|+||+||.
T Consensus 321 -~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R~ 399 (452)
T KOG1378|consen 321 -REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFRE 399 (452)
T ss_pred -HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccccc
Confidence 889999999999999999999999999999999997766555556889999999999995 45666668999999999
Q ss_pred CcceEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEecCCCcccccCCCCC
Q 007133 562 YDWGFVKLTAFNHSSLLFEYKKS--CDGKVYDSFTISRDYRDVLACVHGSCE 611 (617)
Q Consensus 562 ~~~Gy~~l~v~~~~~L~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~ 611 (617)
.+|||++|+++|++++.++++++ ..|++.|+|+|.|+..+...|....|.
T Consensus 400 ~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~ 451 (452)
T KOG1378|consen 400 GDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCI 451 (452)
T ss_pred ccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccC
Confidence 99999999999999999999985 337899999999999999999999886
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=1e-68 Score=581.34 Aligned_cols=378 Identities=27% Similarity=0.470 Sum_probs=309.1
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceeccc-ceEEeecccCCCCCccccccCCCeEEE
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAG-TLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~-~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
+++..|.|+||+++. .++|+|+|.|... ..+.|+||++++....++.+ +.+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 477899999999997 8999999999854 45899999987766555544 3455421 123 3799999
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHH
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIR 327 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (617)
|+|+||+|+|+|+||||.. .+|+.++|+|+|.. .++||+++||+|.... ...+++++.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 35788999998853 4699999999986421 1245666655
Q ss_pred hcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCC
Q 007133 328 DLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAE 407 (617)
Q Consensus 328 ~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~ 407 (617)
.+||||||+||++|++++..+|++|+++++++++.+|+|+++||||.+.... ...+....|..+|.||..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~--------~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPI--------LHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCcccccccccc--------ccCcCccchhhcccCCcc
Confidence 6899999999999999888999999999999999999999999999863210 111233467789999953
Q ss_pred ---CCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhh
Q 007133 408 ---NRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMG 484 (617)
Q Consensus 408 ---~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~ 484 (617)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+||++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2357899999999999999999988888999999999999998888999999999999 87754332211 11234
Q ss_pred HHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCC---CCCCCCCCCcceeee
Q 007133 485 RESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHL---SDFSEVTPNWSLYRD 561 (617)
Q Consensus 485 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l---~~~~~~~~~ws~~~~ 561 (617)
|+.|++||.+++|||+|+||+|.|||++|+|++++. +.||+|||+|+||+.. ..+..++++|++||.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~----------~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTD----------KCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCccC----------CCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 889999999999999999999999999999998762 4699999999999874 345557889999999
Q ss_pred CcceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecCCCcccc
Q 007133 562 YDWGFVKLTAFNHSSLLFEYKKSCDGK--VYDSFTISRDYRDVLAC 605 (617)
Q Consensus 562 ~~~Gy~~l~v~~~~~L~~~~~~~~dG~--v~D~f~i~k~~~~~~~~ 605 (617)
.+|||.+|++.|.++|+++|+++.||+ +.|+|||+|-... -+|
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~ 425 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGC 425 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-Ccc
Confidence 999999999999999999999977764 8999999996544 444
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=5.7e-47 Score=394.29 Aligned_cols=282 Identities=41% Similarity=0.719 Sum_probs=223.6
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcH--hHHHHHHHhhhhhhcCCCe
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYI--SQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~vP~ 367 (617)
.++||+++||+|... ..+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~-----------~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNT-----------NNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCC-----------CCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 459999999999752 123578888887556899999999999988765 7899999999999999999
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCccccceeccC---CCCCCCeEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVP---AENRAKFWYSTDYGMFHFCIADTEHDW---REGSEQYRF 441 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P---~~~~~~~yYsfd~G~v~fi~LDt~~~~---~~g~~Q~~W 441 (617)
++++||||+.......+... + ..++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA------F----FPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc------c----cccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999875332211110 0 0011222 122357899999999999999998765 567899999
Q ss_pred HHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceecc
Q 007133 442 IEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVN 521 (617)
Q Consensus 442 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~ 521 (617)
|+++|++.++++.||+||++|+|+ |+........ ...... ++.|++||++|+|+++|+||+|.|||++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~~-~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEKM-RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHHH-HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999987667799999999999 7765432211 011233 889999999999999999999999999999999886
Q ss_pred CCcccccCCCCceEEEEECCCCCCCCCCCCC--CCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007133 522 TEKYHYTGTVNGTIHVVVGGGGSHLSDFSEV--TPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGKVYDSFTISR 597 (617)
Q Consensus 522 ~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~v~D~f~i~k 597 (617)
.......+++|++|||+|+||+.++..... .++|+.++..++||++|++.++++|+++++.+.+|+|+|+|+|.|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222467899999999999988654332 358999999999999999988789999999989999999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=9.1e-34 Score=299.03 Aligned_cols=269 Identities=17% Similarity=0.239 Sum_probs=189.6
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCc----HhHHHHHHH-hhhhhh--c
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGY----ISQWDQFTA-QVEPIA--S 363 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~-~i~~l~--~ 363 (617)
.++|+++||+|.+..+ |......+.++.++ .++|||+.+||+. .+|. +.+|++-++ .+.... .
T Consensus 26 ~l~F~~vGDwG~g~~~--------Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L 95 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQ--------QKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDM 95 (394)
T ss_pred eEEEEEEecCCCCchh--------HHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhh
Confidence 4899999999964321 22233445555554 6899999999998 5553 456665333 343333 4
Q ss_pred CCCeEEcccCCCCCCCCCCC--ccCCCC--CCC----cc--CccccceeccCCCCCCCeEEEE----Ee-----------
Q 007133 364 TVPYMIGSGNHERDWPNSGS--FYDTTD--SGG----EC--GVPAETMFYVPAENRAKFWYST----DY----------- 418 (617)
Q Consensus 364 ~vP~~~v~GNHD~~~~~~g~--~y~~~d--s~g----e~--g~~~~~~f~~P~~~~~~~yYsf----d~----------- 418 (617)
++||++++||||+..+.... .+...- ..+ +- ......||.||. .||++ ..
T Consensus 96 ~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~~ 170 (394)
T PTZ00422 96 QIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSGH 170 (394)
T ss_pred CCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeecccccccccccC
Confidence 79999999999986322110 011000 000 00 001136899984 57754 21
Q ss_pred --CCEEEEEEeCCCC-----CC-CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHH
Q 007133 419 --GMFHFCIADTEHD-----WR-EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQR 490 (617)
Q Consensus 419 --G~v~fi~LDt~~~-----~~-~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~ 490 (617)
..+.||++||... +. ....|++||+++|+.. ++.++|+||++|||+ ||++.+ +.. ..+ ++.|+|
T Consensus 171 ~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~h-g~~----~~L-~~~L~P 242 (394)
T PTZ00422 171 KDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSS-KGD----SYL-SYYLLP 242 (394)
T ss_pred CCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCC-CCC----HHH-HHHHHH
Confidence 1289999999632 11 2468899999999754 356789999999999 998653 221 234 889999
Q ss_pred HHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEE
Q 007133 491 LWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLT 570 (617)
Q Consensus 491 Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~ 570 (617)
||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.++
T Consensus 243 LL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~~ 303 (394)
T PTZ00422 243 LLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIHE 303 (394)
T ss_pred HHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEEE
Confidence 9999999999999999999974 2478899999998765432 23467888988999999999
Q ss_pred EecCCeEEEEEEECCCCcEEEEEEEEecCCCc
Q 007133 571 AFNHSSLLFEYKKSCDGKVYDSFTISRDYRDV 602 (617)
Q Consensus 571 v~~~~~L~~~~~~~~dG~v~D~f~i~k~~~~~ 602 (617)
+ +++.|+++|+.+.+|++++++++.|..|-.
T Consensus 304 l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~ 334 (394)
T PTZ00422 304 L-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKL 334 (394)
T ss_pred E-ecCEEEEEEEeCCCCcEEEEeeecccchhh
Confidence 8 889999999955899999999998876654
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.97 E-value=8e-31 Score=270.70 Aligned_cols=247 Identities=25% Similarity=0.397 Sum_probs=175.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcH----hHHH-HHHHhhhhhhcCCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYI----SQWD-QFTAQVEPIASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~----~~wd-~f~~~i~~l~~~vP 366 (617)
++|+++||+|..... .+......+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 489999999975210 112223444555554 6899999999999987742 3443 45555555556899
Q ss_pred eEEcccCCCCCCCCCCC-ccCCCCCCCccCccccceeccCCCCCCCeEEEEEeC------CEEEEEEeCCCCC-------
Q 007133 367 YMIGSGNHERDWPNSGS-FYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYG------MFHFCIADTEHDW------- 432 (617)
Q Consensus 367 ~~~v~GNHD~~~~~~g~-~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G------~v~fi~LDt~~~~------- 432 (617)
+|+++||||+....... .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986311100 0000 0012334444 468999998 7999999998532
Q ss_pred --------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecC
Q 007133 433 --------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGH 504 (617)
Q Consensus 433 --------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH 504 (617)
..+.+|++||+++|++. +.+|+||++|+|+ ++.... .. .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~-~~----~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEH-GP----TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCC-CC----cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13579999999999985 3489999999999 765432 11 1233 78999999999999999999
Q ss_pred cccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCC---CCCCcceeeeCcceEEEEEEecCCeEEEEE
Q 007133 505 VHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSE---VTPNWSLYRDYDWGFVKLTAFNHSSLLFEY 581 (617)
Q Consensus 505 ~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~ 581 (617)
+|.+++..+ ...++.||++|+||........ ..++|..++...+||++|++ ++++|+++|
T Consensus 210 ~H~~~~~~~----------------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKD----------------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeec----------------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 999998853 1248899999998876543321 22467888889999999999 678999999
Q ss_pred EECCCC
Q 007133 582 KKSCDG 587 (617)
Q Consensus 582 ~~~~dG 587 (617)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=9.6e-27 Score=227.51 Aligned_cols=259 Identities=21% Similarity=0.342 Sum_probs=165.8
Q ss_pred CCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHH-HHHHhhhhhhc---
Q 007133 288 QDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWD-QFTAQVEPIAS--- 363 (617)
Q Consensus 288 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~~--- 363 (617)
++..++|+++||+|.... |+ |......+.+|.++ .++|||+.+||++|++|...+.| +|.+.++.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 455699999999995432 21 11122334444443 68999999999999999766655 44444554432
Q ss_pred -CCCeEEcccCCCCCCCCCC---CccCCCCCCCccCccccceeccCCCCCCCeEEE----EE--eCCEEEEEEeCCC---
Q 007133 364 -TVPYMIGSGNHERDWPNSG---SFYDTTDSGGECGVPAETMFYVPAENRAKFWYS----TD--YGMFHFCIADTEH--- 430 (617)
Q Consensus 364 -~vP~~~v~GNHD~~~~~~g---~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYs----fd--~G~v~fi~LDt~~--- 430 (617)
+.||+.+.||||+..+-.. +.|. ....||..|.. ||. .+ .-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~----------~~d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLR----------KIDKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHH----------hhccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 6799999999999743211 0111 11234554421 110 00 1123333333321
Q ss_pred ----CCCC-------CHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcE
Q 007133 431 ----DWRE-------GSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDI 499 (617)
Q Consensus 431 ----~~~~-------g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdl 499 (617)
+|+. ...|+.||+..|++ +.++|+||++|||+ .+.+. |+. . ..+ ++.|.|||++++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~-HG~---T-~eL-~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGH-HGP---T-KEL-EKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhc-cCC---h-HHH-HHHHHHHHHhcCCcE
Confidence 1211 25788999999999 78899999999998 66543 342 2 244 899999999999999
Q ss_pred EEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcc----eeeeCcceEEEEEEecCC
Q 007133 500 AFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWS----LYRDYDWGFVKLTAFNHS 575 (617)
Q Consensus 500 vlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws----~~~~~~~Gy~~l~v~~~~ 575 (617)
+++||+|..|..-- ...++-|+++|+ |++...-...++.|. .|.-..-||+.+++ .+.
T Consensus 247 Y~nGHDHcLQhis~----------------~e~~iqf~tSGa-gSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHISS----------------PESGIQFVTSGA-GSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhccC----------------CCCCeeEEeeCC-cccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 99999999998731 123445555554 444322222344443 34444559999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEec
Q 007133 576 SLLFEYKKSCDGKVYDSFTISRD 598 (617)
Q Consensus 576 ~L~~~~~~~~dG~v~D~f~i~k~ 598 (617)
.+++.|+ +..|+++.+....|.
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 789999999876553
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.94 E-value=3.7e-26 Score=234.21 Aligned_cols=240 Identities=16% Similarity=0.147 Sum_probs=160.9
Q ss_pred CceEEEEEeecCCCcCCCCcccc--cCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcH----hHHHHHHHhhh
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYS--NYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYI----SQWDQFTAQVE 359 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~--~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~----~~wd~f~~~i~ 359 (617)
.+++|++++|+|.+...+..... .+ ......++++++. .++||||+++||+++..... .+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 35999999999998543221110 11 1112234444333 24899999999999765432 35666777777
Q ss_pred hhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCC------
Q 007133 360 PIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWR------ 433 (617)
Q Consensus 360 ~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~------ 433 (617)
.+...+|+++++||||........ . ..+|.- ..+..||+|++|+++||+|||.....
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~-------------~-~~~f~~---~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEE-------------S-IKDYRD---VFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChh-------------H-HHHHHH---HhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 666689999999999985321100 0 011110 01235799999999999999975321
Q ss_pred CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCC--ccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 434 EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGS--FEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 434 ~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~--~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
...+|++||+++|++..+.+.+++||++|+|+ +..... ..+.. .... .++.|.++|++++|+++|+||+|.+++.
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~-~~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKS-VRKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHH-HHHHHHHHHHhcCceEEEECccccCCce
Confidence 24799999999999975446678999999999 643221 11111 1112 2789999999999999999999998764
Q ss_pred ccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEE
Q 007133 512 CPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYK 582 (617)
Q Consensus 512 ~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~ 582 (617)
. .+++.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 222 ~------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 222 R------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred E------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 2 23677788887776431 13478999999 6778899987
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.89 E-value=3e-22 Score=202.21 Aligned_cols=228 Identities=13% Similarity=0.167 Sum_probs=151.2
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998753210000 01123344444443 2389999999999965 4455677777777766 79999
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDW----REGSEQYRFIEQ 444 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~----~~g~~Q~~WL~~ 444 (617)
.++||||.... ...++. .........+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-MRAVFP-----------------ELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-HHHhhc-----------------cccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 001110 00001234578999999999999987532 135789999999
Q ss_pred HHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc-CCcEEEecCcccceeeccccCceeccCC
Q 007133 445 CLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYERTCPIYQNQCVNTE 523 (617)
Q Consensus 445 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 523 (617)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999863 345889999998 5542211111 1111 267999999999 99999999999965442
Q ss_pred cccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEec
Q 007133 524 KYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFN 573 (617)
Q Consensus 524 ~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~ 573 (617)
.+|+.++++|+.|..... .++-..+....+||..+++++
T Consensus 199 -------~~g~~~~~~gs~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFAP----DLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred -------ECCEEEEEcCcceeeecC----CCCcccccccCCCCcEEEEec
Confidence 257788899888876422 233334446678998888754
No 9
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.89 E-value=4.3e-21 Score=211.78 Aligned_cols=308 Identities=18% Similarity=0.282 Sum_probs=149.2
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhH
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNT 321 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~ 321 (617)
..+.+++.++||+|+|+|+||+... +....|..++|+|+|... ...+||++++|.+... +..+.
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999874 123457899999996543 3359999999996532 12467
Q ss_pred HHHHHHhcCCCcEEEEcCccccCCCc-----------------------HhH----HHHHH--HhhhhhhcCCCeEEccc
Q 007133 322 TDQLIRDLSNIDIVFHIGDITYANGY-----------------------ISQ----WDQFT--AQVEPIASTVPYMIGSG 372 (617)
Q Consensus 322 ~~~l~~~~~~pDfvl~~GDi~Y~~g~-----------------------~~~----wd~f~--~~i~~l~~~vP~~~v~G 372 (617)
+..+++. .+|||+||+||.+|+++. ... |..+. ..++.+.+++|+++++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999998741 112 22221 33566778999999999
Q ss_pred CCCCCCCCCCCccCCCCCCCccC-------cccccee-ccCC------CCCCCeEEEEEeCC-EEEEEEeCCCCCC----
Q 007133 373 NHERDWPNSGSFYDTTDSGGECG-------VPAETMF-YVPA------ENRAKFWYSTDYGM-FHFCIADTEHDWR---- 433 (617)
Q Consensus 373 NHD~~~~~~g~~y~~~ds~ge~g-------~~~~~~f-~~P~------~~~~~~yYsfd~G~-v~fi~LDt~~~~~---- 433 (617)
+||+..+..+.- ..... ...+ ..++.++ .+|. ......|++|++|+ +.|++||+.....
T Consensus 203 DHdi~nn~~~~~-~~~~~-~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~ 280 (453)
T PF09423_consen 203 DHDIGNNWWGDG-AENHQ-DTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC 280 (453)
T ss_dssp STTTSTT-BTTB--STT----HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CC
T ss_pred CceecccccCCc-ccccc-ccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccc
Confidence 999963221100 00000 0000 0011111 1332 12356799999999 9999999986321
Q ss_pred -----------------CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCC-------CCC--CCccchhhHHH
Q 007133 434 -----------------EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWY-------GQE--GSFEEPMGRES 487 (617)
Q Consensus 434 -----------------~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~-------~~~--g~~~~~~~r~~ 487 (617)
.|.+|++||++.|++ +.++|+|++.-.|+ ....... ..+ +.+. . .|++
T Consensus 281 ~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~-~-er~~ 354 (453)
T PF09423_consen 281 DGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYP-A-ERQR 354 (453)
T ss_dssp CSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSH-H-HHHH
T ss_pred cccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCH-H-HHHH
Confidence 258999999999998 56899999988877 3221110 011 1121 2 2889
Q ss_pred HHHHHHHcCCc--EEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCC---CC------CCCCCc
Q 007133 488 LQRLWQKYKVD--IAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSD---FS------EVTPNW 556 (617)
Q Consensus 488 l~~Ll~k~~Vd--lvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~---~~------~~~~~w 556 (617)
|..+|.+.++. ++|+|++|...-..--.+..-... ......+-+++++=.+.... .. ....++
T Consensus 355 Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~------~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~ 428 (453)
T PF09423_consen 355 LLDFLRESGIRNVVFLSGDVHASAASRIPPDDADPPD------GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPH 428 (453)
T ss_dssp HHHHHHHTT---EEEEE-SSSSEEEEEEESSTT---T------TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TT
T ss_pred HHHHHHhhCCCCEEEEecCcchheeeecccccccccC------CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCc
Confidence 99999988876 789999999765432111100000 00012234444331111100 00 011234
Q ss_pred ceeee-CcceEEEEEEecCCeEEEEE
Q 007133 557 SLYRD-YDWGFVKLTAFNHSSLLFEY 581 (617)
Q Consensus 557 s~~~~-~~~Gy~~l~v~~~~~L~~~~ 581 (617)
-.|.+ ..+||+.|++ +.+.++.+|
T Consensus 429 ~~~~~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 429 LKFADLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp EEEEE-B-EEEEEEEE-ETTEEEEEE
T ss_pred eEEeECCCCcEEEEEE-ccceEEEEC
Confidence 44544 6899999999 788988875
No 10
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=2.4e-21 Score=199.20 Aligned_cols=207 Identities=20% Similarity=0.247 Sum_probs=135.7
Q ss_pred eEEEEEeecCCCcCCC-CcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCc--HhHHHHHHHhhhhhhcCCC
Q 007133 292 QRVVIFGDMGKAERDG-SNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGY--ISQWDQFTAQVEPIASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~~vP 366 (617)
|||++++|+|....+. .+.+ ...+...++++++.+ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~---~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRY---YRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccch---HHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCC
Confidence 6999999999654321 1111 111234445555442 469999999999965432 14555555555554 589
Q ss_pred eEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC---------------
Q 007133 367 YMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHD--------------- 431 (617)
Q Consensus 367 ~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~--------------- 431 (617)
+++++||||....... .+ . .+.....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~~-~~-----------~-----~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~ 138 (267)
T cd07396 76 VHHVLGNHDLYNPSRE-YL-----------L-----LYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENA 138 (267)
T ss_pred EEEecCccccccccHh-hh-----------h-----cccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhH
Confidence 9999999998632110 00 0 00111224568999999999999999631
Q ss_pred -------------------CCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHH
Q 007133 432 -------------------WREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLW 492 (617)
Q Consensus 432 -------------------~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll 492 (617)
...+.+|++||++.|++... +..++||++|+|+ +.... ...... . .++.+.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~~--~-~~~~~~~ll 211 (267)
T cd07396 139 DDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGLL--W-NHEEVLSIL 211 (267)
T ss_pred HHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Cccccc--c-CHHHHHHHH
Confidence 01347999999999998643 2345899999998 65432 111111 1 167889999
Q ss_pred HHc-CCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCC
Q 007133 493 QKY-KVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSH 545 (617)
Q Consensus 493 ~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~ 545 (617)
.++ +|+++|+||+|.++... .+|+.|+++|+-...
T Consensus 212 ~~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~~ 247 (267)
T cd07396 212 RAYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVET 247 (267)
T ss_pred HhCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhcC
Confidence 995 89999999999987432 257888888776543
No 11
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.84 E-value=1.8e-19 Score=186.07 Aligned_cols=247 Identities=15% Similarity=0.174 Sum_probs=145.9
Q ss_pred EEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcHhHHHHHH
Q 007133 280 FRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYISQWDQFT 355 (617)
Q Consensus 280 F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~ 355 (617)
.++.++. ..++||++++|+|....... .... ......++++++. ..+|||||++||++.. +...+|+.+.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~-~~~~--~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~-~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHE-TLLG--VNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD-HSSEAYQHFA 78 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCC-ceec--cCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3454443 24599999999997432111 1000 1112334444432 2479999999999964 4556777777
Q ss_pred HhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCC---
Q 007133 356 AQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDW--- 432 (617)
Q Consensus 356 ~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~--- 432 (617)
+.++.+ .+|+++++||||..... ..++. ...+ ...++.+..++++||+|||....
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~~~~-~~~~~--------------~~~~-----~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQPAM-YSALQ--------------DAGI-----SPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCChHHH-HHHHh--------------hcCC-----CccceEEecCCEEEEEecCCCCCCcC
Confidence 777766 68999999999984210 01110 0001 11223344456999999997532
Q ss_pred -CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc-CCcEEEecCccccee
Q 007133 433 -REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYER 510 (617)
Q Consensus 433 -~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeR 510 (617)
..+.+|++||++.|++.. +.+-+|++.|+|+ .....|... ... . ..+.|.++++++ +|+++|+||+|....
T Consensus 137 G~l~~~ql~wL~~~L~~~~--~~~~vv~~hH~P~-~~~~~~~d~-~~l--~-n~~~l~~ll~~~~~v~~vl~GH~H~~~~ 209 (275)
T PRK11148 137 GELSEYQLEWLERKLADAP--ERHTLVLLHHHPL-PAGCAWLDQ-HSL--R-NAHELAEVLAKFPNVKAILCGHIHQELD 209 (275)
T ss_pred CEeCHHHHHHHHHHHhhCC--CCCeEEEEcCCCC-CCCcchhhc-cCC--C-CHHHHHHHHhcCCCceEEEecccChHHh
Confidence 235899999999999852 2332444444565 332222111 111 1 157899999998 899999999998543
Q ss_pred eccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEE
Q 007133 511 TCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKK 583 (617)
Q Consensus 511 t~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~ 583 (617)
. ..+|+.++++++.+...... .... .+.....||..+++..++.+..+.++
T Consensus 210 ~------------------~~~gi~~~~~ps~~~q~~~~---~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 210 L------------------DWNGRRLLATPSTCVQFKPH---CTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred c------------------eECCEEEEEcCCCcCCcCCC---CCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 2 12577777777766543111 1111 12234468888888555566666554
No 12
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.83 E-value=1.7e-19 Score=189.62 Aligned_cols=242 Identities=23% Similarity=0.363 Sum_probs=166.0
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhH
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNT 321 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~ 321 (617)
..+.+++.++||+|++.|+||+... ...|.++.|||+|+++.. ++++.+||..+.. |..+-..+
T Consensus 97 ~dhtv~v~~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~---------~~~gy~~a 160 (522)
T COG3540 97 LDHTVHVDLRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQG---------WEIGYMTA 160 (522)
T ss_pred cCceEEEeccCCCCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhccccc---------cccchhHH
Confidence 4588999999999999999999864 234789999999998765 7888888876542 33445667
Q ss_pred HHHHHHhcCCCcEEEEcCccccCCCcH-----------------------------hHHHHHH--HhhhhhhcCCCeEEc
Q 007133 322 TDQLIRDLSNIDIVFHIGDITYANGYI-----------------------------SQWDQFT--AQVEPIASTVPYMIG 370 (617)
Q Consensus 322 ~~~l~~~~~~pDfvl~~GDi~Y~~g~~-----------------------------~~wd~f~--~~i~~l~~~vP~~~v 370 (617)
.+.|.+ .+|||+||.||.+|+.|.. .+|..+. +.++...+..|+++.
T Consensus 161 Y~~ma~--~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~ 238 (522)
T COG3540 161 YKTMAK--EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQ 238 (522)
T ss_pred HHHHHh--cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEE
Confidence 788877 5799999999999986521 1222221 234555678999999
Q ss_pred ccCCCCCCCCCCCccCCC---CC-CCccC------cccccee-ccCCC-----CCCCeEEEEEeCC-EEEEEEeCCCCCC
Q 007133 371 SGNHERDWPNSGSFYDTT---DS-GGECG------VPAETMF-YVPAE-----NRAKFWYSTDYGM-FHFCIADTEHDWR 433 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~---ds-~ge~g------~~~~~~f-~~P~~-----~~~~~yYsfd~G~-v~fi~LDt~~~~~ 433 (617)
+..||..++- .+.. |+ ..+-. ..++.++ .||-. .....|.+|.||+ ..|.+||+..+..
T Consensus 239 WDDHEv~NN~----~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~ 314 (522)
T COG3540 239 WDDHEVANNW----SNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRT 314 (522)
T ss_pred eccccccccc----cccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhcc
Confidence 9999997431 1111 11 11110 0111111 35521 1257899999999 6799999986431
Q ss_pred ----------------------CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccC---CC----CCC-CCCCCccchh
Q 007133 434 ----------------------EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYS---SD----YWY-GQEGSFEEPM 483 (617)
Q Consensus 434 ----------------------~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~ys---s~----~~~-~~~g~~~~~~ 483 (617)
.|..|.+||++.|.+ +++.|+|+..-.||.-- .. ... ..++...-++
T Consensus 315 dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~ 391 (522)
T COG3540 315 DQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPA 391 (522)
T ss_pred ccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcc
Confidence 268999999999998 78999999888887311 00 000 0011111245
Q ss_pred hHHHHHHHHHHcCCc--EEEecCcccc
Q 007133 484 GRESLQRLWQKYKVD--IAFFGHVHNY 508 (617)
Q Consensus 484 ~r~~l~~Ll~k~~Vd--lvlsGH~H~Y 508 (617)
+|+.|...+...++. ++|+|.+|..
T Consensus 392 ~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 392 GRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred cHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 599999999998876 8999999984
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.82 E-value=2.2e-19 Score=183.50 Aligned_cols=195 Identities=17% Similarity=0.175 Sum_probs=121.7
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCC--------cHhHHHHHHHhhhhhhc--
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANG--------YISQWDQFTAQVEPIAS-- 363 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g--------~~~~wd~f~~~i~~l~~-- 363 (617)
|+.++|+|.+...... .....+.+...++. .+||+|+++||++.... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~~-----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPN-----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchh-----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 7899999987532110 00000122333333 57999999999996431 24678888887765432
Q ss_pred CCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC----------CC
Q 007133 364 TVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHD----------WR 433 (617)
Q Consensus 364 ~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~----------~~ 433 (617)
..|++.++||||....... +. .. ..+..+..........++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998521100 00 00 011111111111111122233459999999999742 12
Q ss_pred CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeecc
Q 007133 434 EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCP 513 (617)
Q Consensus 434 ~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p 513 (617)
...+|++||++.|++. .+.+++||++|+|+ +..... . ....+ .+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~----~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP----S---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC----C---cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3489999999999975 34568999999998 542111 1 11113 399999999999999999999999666
Q ss_pred c
Q 007133 514 I 514 (617)
Q Consensus 514 ~ 514 (617)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.79 E-value=9.2e-19 Score=174.20 Aligned_cols=159 Identities=21% Similarity=0.287 Sum_probs=112.2
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCC-chhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhh-cCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPG-SLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIA-STVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~-~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~-~~vP~ 367 (617)
|||++++|+|..... .+. ....++++++.. .++|+|+++||+++......+|+.+.+.++.+. ..+|+
T Consensus 1 f~~~~~~D~q~~~~~--------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~ 72 (214)
T cd07399 1 FTLAVLPDTQYYTES--------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPY 72 (214)
T ss_pred CEEEEecCCCcCCcC--------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcE
Confidence 689999999975421 011 123445555542 579999999999976554678999988888886 67999
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHH
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLA 447 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~ 447 (617)
++++||||.- +.+|+. ...+|++||++.|+
T Consensus 73 ~~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~ 102 (214)
T cd07399 73 SVLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLK 102 (214)
T ss_pred EEECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHH
Confidence 9999999931 112221 24799999999999
Q ss_pred hcccCCCCEEEEEecccCccCCCCCCCCCC-CccchhhHHHHHHHHHHc-CCcEEEecCcccceeec
Q 007133 448 SVDRRKQPWLIFAAHRVLGYSSDYWYGQEG-SFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYERTC 512 (617)
Q Consensus 448 ~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g-~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~ 512 (617)
+. +..++|+++|+|+ +....+..... ......+++.|++|++++ +|+++|+||+|.+.+..
T Consensus 103 ~~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 103 KH---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HC---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 84 2345899999998 65443321110 000112356799999998 79999999999998775
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.69 E-value=4.8e-16 Score=162.24 Aligned_cols=180 Identities=16% Similarity=0.174 Sum_probs=116.1
Q ss_pred hHHHHHHHhcCCCcEEEEcCccccCCCcHh--------HHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCC
Q 007133 320 NTTDQLIRDLSNIDIVFHIGDITYANGYIS--------QWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSG 391 (617)
Q Consensus 320 ~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~--------~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ 391 (617)
.+++.+.+...+|||||++||+++...... .+..+++.++.....+|+++++||||....+.... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 344555554468999999999997654321 24556666777777999999999999863221110 0000
Q ss_pred CccCccccceec--cCCC----CCCCeEEEEE-eCCEEEEEEeCCCCC-----------CCCHHHHHHHHHHHHhcccCC
Q 007133 392 GECGVPAETMFY--VPAE----NRAKFWYSTD-YGMFHFCIADTEHDW-----------REGSEQYRFIEQCLASVDRRK 453 (617)
Q Consensus 392 ge~g~~~~~~f~--~P~~----~~~~~yYsfd-~G~v~fi~LDt~~~~-----------~~g~~Q~~WL~~~L~~~~r~~ 453 (617)
...-......|. +|.+ -..+.||+++ .++++||+|||.... ....+|++||+++|+++.+.+
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 000000011111 2211 1235689988 899999999997532 124789999999999975333
Q ss_pred CCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcC--CcEEEecCcccceee
Q 007133 454 QPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYK--VDIAFFGHVHNYERT 511 (617)
Q Consensus 454 ~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~YeRt 511 (617)
..++|++|+|+ +..... . . ...++.|.+|+++|+ |.++|+||+|..+..
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 34788999998 443210 0 0 123789999999997 788999999997765
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.65 E-value=2e-15 Score=154.00 Aligned_cols=162 Identities=20% Similarity=0.214 Sum_probs=102.9
Q ss_pred CCCcEEEEcCccccCCC--cHhHHH----HHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceec
Q 007133 330 SNIDIVFHIGDITYANG--YISQWD----QFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFY 403 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g--~~~~wd----~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~ 403 (617)
.+||+|+++||+++.+. ...+|. +|.+.+.++...+|++.++||||+.+... ... ..-..|+.+|.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~-~~~-------~~~~rf~~~Fg 115 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNG-VVL-------PVRQRFEKYFG 115 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCC-CCH-------HHHHHHHHHhC
Confidence 58999999999996532 123453 34444444333589999999999853211 000 00011222331
Q ss_pred cCCCCCCCeEEEEEeCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCC
Q 007133 404 VPAENRAKFWYSTDYGMFHFCIADTEHDW-----REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGS 478 (617)
Q Consensus 404 ~P~~~~~~~yYsfd~G~v~fi~LDt~~~~-----~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~ 478 (617)
...|+|++|+++||+|||.... ....+|.+||++.|+... ...| +||++|+|+ |.... ..+|.
T Consensus 116 -------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~--~~cg~ 183 (257)
T cd08163 116 -------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPN--TSCGP 183 (257)
T ss_pred -------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCC--CCCCC
Confidence 2348999999999999997421 234679999999998753 2334 899999999 65432 11110
Q ss_pred ---------------ccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 479 ---------------FEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 479 ---------------~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
+..-+..+.-..||++.++.+||+||+|.|=..
T Consensus 184 ~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 184 LRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 000112355567888889999999999998544
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.64 E-value=1.2e-16 Score=148.82 Aligned_cols=198 Identities=20% Similarity=0.197 Sum_probs=100.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHH-HhhhhhhcCCCeEEc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFT-AQVEPIASTVPYMIG 370 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~-~~i~~l~~~vP~~~v 370 (617)
+||+++||+|...... .. ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~~-------~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD-------SD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHHH-------CH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcch-------hH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 6999999999864210 00 0122222222 378999999999998776655444322 233344568999999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCccCccccceeccCC-CCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhc
Q 007133 371 SGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPA-ENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASV 449 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~-~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~ 449 (617)
+||||+........... . ........... ....+...........+...+..........+..|+...+...
T Consensus 72 ~GNHD~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (200)
T PF00149_consen 72 LGNHDYYSGNSFYGFYD-----Y--QFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLL 144 (200)
T ss_dssp E-TTSSHHHHHHHHHHH-----H--HHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHH
T ss_pred ccccccceecccccccc-----c--cccccccccccccccCcceeeecccccccccccccccccccccchhccccccccc
Confidence 99999863110000000 0 00000000000 0000000111222222222222111111223333333333332
Q ss_pred ccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccc
Q 007133 450 DRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNY 508 (617)
Q Consensus 450 ~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 508 (617)
.+...+++||++|+|+ ++........ ......++.+..++.+++|+++|+||+|.|
T Consensus 145 ~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 145 EAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 3356678999999999 6653321100 001123789999999999999999999987
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.62 E-value=5.2e-15 Score=145.54 Aligned_cols=166 Identities=17% Similarity=0.215 Sum_probs=101.5
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHh-HHHHHHHhhhhhh-cCCCeE
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYIS-QWDQFTAQVEPIA-STVPYM 368 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 368 (617)
.+||++++|+|....................+.++++. .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 38999999999876421100000001123344555543 68999999999998655432 2344444444443 379999
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHh
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLAS 448 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~ 448 (617)
+++||||.. -....+|.+||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--cCCCCEEEEEecccCccCCC-CCC------CC--CCCccchhhHHHHHHHHHHcCCcEEEecCcccceeec
Q 007133 449 VD--RRKQPWLIFAAHRVLGYSSD-YWY------GQ--EGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTC 512 (617)
Q Consensus 449 ~~--r~~~pw~Iv~~H~P~~yss~-~~~------~~--~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 512 (617)
.. +....+.++++|+|+ .... .|. +. +...........+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 234456899999997 4321 111 10 1000001112344445566799999999999987654
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.60 E-value=1e-14 Score=147.00 Aligned_cols=201 Identities=18% Similarity=0.258 Sum_probs=118.6
Q ss_pred EEEEeecCCCcC--CCCcccccCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe
Q 007133 294 VVIFGDMGKAER--DGSNEYSNYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 294 f~v~GD~g~~~~--~~~~~~~~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 367 (617)
+.+++|+|.... .+.+. +.+...+.++++.+. ..+||+|+++||+++.. ...+....++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~---~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~-~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDV---FGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAM-KLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCcc---cCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCC-ChHHHHHHHHHHHhC--CCCe
Confidence 468899997632 11111 222223444444432 24899999999999533 222333344444433 3578
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCC-CCeEEEEEeCCEEEEEEeCCC----CC----------
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENR-AKFWYSTDYGMFHFCIADTEH----DW---------- 432 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~-~~~yYsfd~G~v~fi~LDt~~----~~---------- 432 (617)
++++||||+....... +... ++.... -..-.++.++++.|++++... .+
T Consensus 75 ~~V~GNHD~~~~~~~~--------------~~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSASK--------------LRKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHHH--------------HHHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 9999999973211000 0000 110000 000134567889999876311 11
Q ss_pred CC---CHHHHHHHHHHHHhcccC-CCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccc
Q 007133 433 RE---GSEQYRFIEQCLASVDRR-KQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNY 508 (617)
Q Consensus 433 ~~---g~~Q~~WL~~~L~~~~r~-~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 508 (617)
.. ...|.+||++.|++.... ...++|+++|+|+ +.... ..+.+..++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 00 246899999999986432 2246899999998 54321 0346788899999999999999999
Q ss_pred eeeccccCceeccCCcccccCCCCceEEEEECCC
Q 007133 509 ERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGG 542 (617)
Q Consensus 509 eRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~g 542 (617)
++..|+.. ..+|+.|+++.++
T Consensus 206 ~~~~~~~~-------------~~~gi~~~~~~~~ 226 (232)
T cd07393 206 GRDRAING-------------ERGGIRYQLVSAD 226 (232)
T ss_pred cccccccc-------------eECCEEEEEEcch
Confidence 99877632 2356777766443
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.55 E-value=7.9e-13 Score=142.51 Aligned_cols=96 Identities=20% Similarity=0.187 Sum_probs=71.3
Q ss_pred CCeEEEEE-eCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCC-CCCCC--CCcc
Q 007133 410 AKFWYSTD-YGMFHFCIADTEHDW-----REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDY-WYGQE--GSFE 480 (617)
Q Consensus 410 ~~~yYsfd-~G~v~fi~LDt~~~~-----~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~-~~~~~--g~~~ 480 (617)
+..||+|+ .+++|||+|||.... ....+|++||+++|++. +.+++||++|||+ ++... +.... +..
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~- 364 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEK- 364 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-cccccccccccccccc-
Confidence 56799999 899999999997531 23589999999999973 4467999999998 66432 11000 000
Q ss_pred chhhHHHHHHHHHHc-CCcEEEecCcccceee
Q 007133 481 EPMGRESLQRLWQKY-KVDIAFFGHVHNYERT 511 (617)
Q Consensus 481 ~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 511 (617)
....++|.++|++| +|.++|+||.|.-..+
T Consensus 365 -~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 365 -RHLGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred -ccCHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 11156899999998 8999999999996644
No 21
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.49 E-value=4.9e-14 Score=111.90 Aligned_cols=62 Identities=39% Similarity=0.776 Sum_probs=42.1
Q ss_pred CceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007133 532 NGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGKVYDSF 593 (617)
Q Consensus 532 ~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~v~D~f 593 (617)
++|||||+|+||+.++.+..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888889999999999999999998999999999999999999997
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.49 E-value=9.3e-13 Score=127.37 Aligned_cols=167 Identities=14% Similarity=0.166 Sum_probs=101.1
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHH-HHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEccc
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTD-QLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSG 372 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 372 (617)
++++||+|.+. ..+. ..++ ..++|+|+++||+++... ......+ +.+.. ..+|+++++|
T Consensus 1 i~~~sD~H~~~---------------~~~~~~~~~-~~~~D~vv~~GDl~~~~~-~~~~~~~-~~l~~--~~~p~~~v~G 60 (188)
T cd07392 1 ILAISDIHGDV---------------EKLEAIILK-AEEADAVIVAGDITNFGG-KEAAVEI-NLLLA--IGVPVLAVPG 60 (188)
T ss_pred CEEEEecCCCH---------------HHHHHHHhh-ccCCCEEEECCCccCcCC-HHHHHHH-HHHHh--cCCCEEEEcC
Confidence 57899998752 1122 2222 268999999999996533 3333333 44433 2789999999
Q ss_pred CCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHH
Q 007133 373 NHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHD------WREGSEQYRFIEQCL 446 (617)
Q Consensus 373 NHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~------~~~g~~Q~~WL~~~L 446 (617)
|||... ..... . + ....+ .+ ..+.+++++|+.+++... .....+|++|+ +.|
T Consensus 61 NHD~~~-----~~~~~----~---~--~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l 118 (188)
T cd07392 61 NCDTPE-----ILGLL----T---S--AGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRL 118 (188)
T ss_pred CCCCHH-----HHHhh----h---c--CcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhh
Confidence 999741 11000 0 0 00001 11 234678899999987431 12346889998 444
Q ss_pred HhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 447 ASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 447 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
+. .+.+.+|+++|+|+ +.. +....... ...+.+.+..++++++++++|+||+|.-.
T Consensus 119 ~~---~~~~~~ilv~H~pp-~~~--~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 119 NN---LLAKNLILVTHAPP-YGT--AVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hc---cCCCCeEEEECCCC-cCC--cccccCCC-CccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 43 23345899999998 553 11110000 01236789999999999999999999953
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.42 E-value=4.9e-12 Score=130.87 Aligned_cols=184 Identities=18% Similarity=0.256 Sum_probs=116.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+||+.++|.|..... ......+.++++.+ .+||+|+++||+++. |....++...+.++......|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999987310 11234455554442 578999999999966 666777777777775555789999
Q ss_pred cccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEe-CCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007133 370 GSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDY-GMFHFCIADTEHDW----REGSEQYRFIEQ 444 (617)
Q Consensus 370 v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~fi~LDt~~~~----~~g~~Q~~WL~~ 444 (617)
+|||||....+...+ ...+... ...+..... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~~--------------~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEAF--------------SDQFFNR----YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHHh--------------hhhhccc----CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 999999864322110 0000000 011111112 67899999998642 346899999999
Q ss_pred HHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcC--CcEEEecCcccc
Q 007133 445 CLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYK--VDIAFFGHVHNY 508 (617)
Q Consensus 445 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Y 508 (617)
.|++........+|+++|+|+ .....+.... .. . ....+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~-~l--~-~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRV-AL--R-DAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCcccee-ee--e-cchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221124677777776 4332221111 11 1 1456777888888 999999999986
No 24
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.42 E-value=3.8e-12 Score=128.88 Aligned_cols=185 Identities=16% Similarity=0.226 Sum_probs=102.8
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEc
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIG 370 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v 370 (617)
||++++|+|.... .+ .....++++++. ..++|+|+++||++... .+..++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 011223344332 15799999999999532 1223444444432 46899999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC-------------------
Q 007133 371 SGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHD------------------- 431 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~------------------- 431 (617)
+||||+..... +.. ....+. + ....+.++.+..++++|++++-..+
T Consensus 68 ~GNHD~~~~~~---~~~----------~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLT---YEE----------IESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCC---HHH----------HHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999742110 000 000000 0 0001122333335677777762111
Q ss_pred -------CC-----CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCC-CCc---cchhhHHHHHHHHHHc
Q 007133 432 -------WR-----EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQE-GSF---EEPMGRESLQRLWQKY 495 (617)
Q Consensus 432 -------~~-----~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~-g~~---~~~~~r~~l~~Ll~k~ 495 (617)
.. ...+|++||++.|++.. ..+ +|+++|+|+ .......+.. ..+ ....+.+.|..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 10 12578999999998752 233 788899987 3311000000 000 0112357899999999
Q ss_pred CCcEEEecCcccce
Q 007133 496 KVDIAFFGHVHNYE 509 (617)
Q Consensus 496 ~VdlvlsGH~H~Ye 509 (617)
+|+++|+||+|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999954
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.40 E-value=2.9e-12 Score=127.79 Aligned_cols=171 Identities=17% Similarity=0.173 Sum_probs=99.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 11233444332 257999999999997544332 345555666666799999
Q ss_pred cccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhc
Q 007133 370 GSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASV 449 (617)
Q Consensus 370 v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~ 449 (617)
++||||+.......+.. ...+.+ +.+- .+.+..++.++..+.+.--.. ...+.+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~~---~l~~~~------v~~L----~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWIE---ALESAG------ITVL----RNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHHH---HHHHcC------CEEe----ecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCC
Confidence 99999986321100000 000000 1100 122344555554443332111 112335666777664
Q ss_pred ccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccC
Q 007133 450 DRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQ 516 (617)
Q Consensus 450 ~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~ 516 (617)
.+..+.|++.|.|. + .+.+ .+.++|++++||+|..|...|...
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~~----~~~~~dl~l~GHtHggqi~~~~~~ 174 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEEA----AAWGVDLQLSGHTHGGQIRLPGIG 174 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHHh----cccCccEEEeccCCCCEEeccccc
Confidence 34456899999985 1 1111 467999999999999997776553
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.39 E-value=3.8e-12 Score=118.29 Aligned_cols=125 Identities=18% Similarity=0.270 Sum_probs=83.5
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcC-CCeEEc
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIAST-VPYMIG 370 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~-vP~~~v 370 (617)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999875421100 0001112222222 2579999999999975 4456677777777766443 699999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcc
Q 007133 371 SGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVD 450 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~ 450 (617)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred cCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 451 RRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 451 r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
|+++|+|+ +..... ..... . .++.+.+++.+++++++|+||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~--~~~~~--~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS--GRERL--L-DAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc--ccccC--C-CHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899998 543221 11111 1 2678999999999999999999996543
No 27
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.39 E-value=1.5e-11 Score=131.36 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=66.4
Q ss_pred CCeEEEEE-eCCE--EEEEEeCCCCC-----------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCC----
Q 007133 410 AKFWYSTD-YGMF--HFCIADTEHDW-----------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDY---- 471 (617)
Q Consensus 410 ~~~yYsfd-~G~v--~fi~LDt~~~~-----------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~---- 471 (617)
+..||+|+ .|++ |||+||+.... ..+.+|++||+++|+... .+.+++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5845 99999987521 134899999999999864 25688888889888 64211
Q ss_pred -CCC-C---CCCccchhhHHHHHHHHHHc-CCcEEEecCcccc
Q 007133 472 -WYG-Q---EGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNY 508 (617)
Q Consensus 472 -~~~-~---~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Y 508 (617)
|.. . .....+...-.+|..+|.+| +|-++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 110 0 00011111124899999998 7999999999973
No 28
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.35 E-value=2.8e-11 Score=120.72 Aligned_cols=175 Identities=12% Similarity=0.156 Sum_probs=104.0
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
+-|+++++|+|.+ ...++++++.. .++|+|+++||+++......++..+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999854 23455555432 57999999999997542344445555555433 58999
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCC-CCCCCeEEEEEe-CCEEEEEEeCCCCC--CCCHHHH----H
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPA-ENRAKFWYSTDY-GMFHFCIADTEHDW--REGSEQY----R 440 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~-~~~~~~yYsfd~-G~v~fi~LDt~~~~--~~g~~Q~----~ 440 (617)
+++||||..-. .+... .+.....+|. -.-...+ ..+ |+++|+.++..... ...++|. .
T Consensus 67 ~V~GNhD~~v~---~~l~~---------~~~~~~~~p~~~~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLW---EYLRE---------AYNAELVHPEIRNVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHH---HHHHH---------HhcccccCccceecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 99999996300 00000 0000000111 0001111 344 66999999865432 2344542 5
Q ss_pred HHHH-HHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcc
Q 007133 441 FIEQ-CLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVH 506 (617)
Q Consensus 441 WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 506 (617)
||.+ .|+...+......|+++|+|+ |..+. ...+.+.+..++++++..++++||+|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221122345899999999 76521 12346789999999999999999999
No 29
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.29 E-value=1.9e-11 Score=116.55 Aligned_cols=150 Identities=17% Similarity=0.155 Sum_probs=85.5
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccC
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGN 373 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 373 (617)
|++++|+|.+.... ...+.+.++ ..++|+|+++||+++... ..++.. .........|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~~-~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFPI-APDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccCC-CCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 011111112 268999999999996433 222222 22233457899999999
Q ss_pred CCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCC
Q 007133 374 HERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRK 453 (617)
Q Consensus 374 HD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~ 453 (617)
||+.. +| .+ ...||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~--~G---~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RI--IG---TTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EE--Ee---eecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 00 00 1123333221 1245555555543
Q ss_pred CCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 454 QPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 454 ~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
+.+||++|+|+ +.................++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23799999998 6543211111111111225667888889999999999999964
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.26 E-value=3.4e-11 Score=119.80 Aligned_cols=197 Identities=11% Similarity=0.072 Sum_probs=107.4
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCC-cHhHHHHHHHhhhhhh-cCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANG-YISQWDQFTAQVEPIA-STVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 368 (617)
||++++|+|.+.......-.........+++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999875421110000001123445555543 257999999999997543 2334566666666654 489999
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceecc--CCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYV--PAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCL 446 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~--P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L 446 (617)
+++||||...... .... . ......... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~-~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLG-ALSP-L-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCccccc-cccc-h-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 9999999864221 0000 0 000000000 0000111223334456888888754322 1233445555555
Q ss_pred HhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCccccee
Q 007133 447 ASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYER 510 (617)
Q Consensus 447 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 510 (617)
.+. .+..+.|++.|.|+ ...... .. .. .......+.+.++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 554 34556899999997 333211 00 00 12234445678999999999999754
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.21 E-value=6.1e-10 Score=114.91 Aligned_cols=168 Identities=15% Similarity=0.174 Sum_probs=94.0
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
++||++++|+|.+... + ...++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|++
T Consensus 49 ~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv~ 116 (271)
T PRK11340 49 PFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPTF 116 (271)
T ss_pred CcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCEE
Confidence 4999999999975321 1 1233443332 26899999999999632 1223455666677776678999
Q ss_pred EcccCCCCCCCCCC-CccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHH
Q 007133 369 IGSGNHERDWPNSG-SFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGM--FHFCIADTEHDWREGSEQYRFIEQC 445 (617)
Q Consensus 369 ~v~GNHD~~~~~~g-~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~--v~fi~LDt~~~~~~g~~Q~~WL~~~ 445 (617)
+++||||+...... ..+.. .-.+.|+ .+- .+....+..++ +.++.+|.... +... ..+.
T Consensus 117 ~V~GNHD~~~~~~~~~~~~~--~l~~~gi------~lL----~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~ 178 (271)
T PRK11340 117 ACFGNHDRPVGTEKNHLIGE--TLKSAGI------TVL----FNQATVIATPNRQFELVGTGDLWA---GQCK---PPPA 178 (271)
T ss_pred EecCCCCcccCccchHHHHH--HHHhcCc------EEe----eCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHh
Confidence 99999997421100 00000 0000111 000 12334445443 56677753211 1111 1111
Q ss_pred HHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeecccc
Q 007133 446 LASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIY 515 (617)
Q Consensus 446 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~ 515 (617)
++ ++. ..|++.|.|- + . +.+.+.++||+||||+|.=|-..|..
T Consensus 179 ~~----~~~-~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~ 221 (271)
T PRK11340 179 SE----ANL-PRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLV 221 (271)
T ss_pred cC----CCC-CeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEcccc
Confidence 22 233 4799999995 1 0 11235789999999999988776754
No 32
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.12 E-value=2e-09 Score=110.06 Aligned_cols=88 Identities=15% Similarity=0.251 Sum_probs=58.1
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCC--------CchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhh
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQP--------GSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEP 360 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 360 (617)
+.+||++.++|+|.+...++.-.+.++. ...+.++++++. ++||||+++||+++.......-.-++..+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 4459999999999876422221111111 123456677764 8999999999999864322211234566666
Q ss_pred h-hcCCCeEEcccCCCCC
Q 007133 361 I-ASTVPYMIGSGNHERD 377 (617)
Q Consensus 361 l-~~~vP~~~v~GNHD~~ 377 (617)
. ..++||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 4 5689999999999965
No 33
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.11 E-value=1.5e-09 Score=101.64 Aligned_cols=153 Identities=18% Similarity=0.278 Sum_probs=90.7
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.||+++||+|.+. ..++++++...++|+|+++||++.. .++.+.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999998753 2355666655679999999999852 4555555554 999999
Q ss_pred cCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhccc
Q 007133 372 GNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDR 451 (617)
Q Consensus 372 GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r 451 (617)
||||... +.+ ... ... .+.....
T Consensus 55 GNHD~~~-----~~~-------------~~~-------~~~--------------------------------~~~~~~~ 77 (156)
T PF12850_consen 55 GNHDNWA-----FPN-------------END-------EEY--------------------------------LLDALRL 77 (156)
T ss_dssp -CCHSTH-----HHS-------------EEC-------TCS--------------------------------SHSEEEE
T ss_pred CCccccc-----chh-------------hhh-------ccc--------------------------------cccceee
Confidence 9999631 100 000 000 0011000
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCC
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTV 531 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 531 (617)
.-..+.|++.|.+. +... .. .+.+..++...+++++++||.|..+... .
T Consensus 78 ~~~~~~i~~~H~~~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------~ 126 (156)
T PF12850_consen 78 TIDGFKILLSHGHP-YDVQ-----------WD-PAELREILSRENVDLVLHGHTHRPQVFK------------------I 126 (156)
T ss_dssp EETTEEEEEESSTS-SSST-----------TT-HHHHHHHHHHTTSSEEEESSSSSEEEEE------------------E
T ss_pred eecCCeEEEECCCC-cccc-----------cC-hhhhhhhhcccCCCEEEcCCcccceEEE------------------E
Confidence 11245788888776 4321 11 4467788889999999999999977653 2
Q ss_pred CceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEE
Q 007133 532 NGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTA 571 (617)
Q Consensus 532 ~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 571 (617)
+++.++..|+-+.... . ..-+|+.+++
T Consensus 127 ~~~~~~~~Gs~~~~~~------------~-~~~~~~i~~~ 153 (156)
T PF12850_consen 127 GGIHVINPGSIGGPRH------------G-DQSGYAILDI 153 (156)
T ss_dssp TTEEEEEE-GSSS-SS------------S-SSEEEEEEEE
T ss_pred CCEEEEECCcCCCCCC------------C-CCCEEEEEEE
Confidence 4667777777654320 1 1458888887
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.03 E-value=2.7e-09 Score=95.50 Aligned_cols=96 Identities=29% Similarity=0.402 Sum_probs=69.4
Q ss_pred cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCC
Q 007133 329 LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAEN 408 (617)
Q Consensus 329 ~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~ 408 (617)
..++|+|+++||+++.... ..+..+...........|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 4789999999999976544 333333323333456899999999999
Q ss_pred CCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHH
Q 007133 409 RAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESL 488 (617)
Q Consensus 409 ~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l 488 (617)
|++.|.|+ +....... .. ... .++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc--chh-hHHHH
Confidence 89999998 55432111 11 011 26788
Q ss_pred HHHHHHcCCcEEEecCcccceeec
Q 007133 489 QRLWQKYKVDIAFFGHVHNYERTC 512 (617)
Q Consensus 489 ~~Ll~k~~VdlvlsGH~H~YeRt~ 512 (617)
..++.+.+++++|+||.|.+.+..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999998875
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.90 E-value=4.2e-08 Score=92.25 Aligned_cols=59 Identities=15% Similarity=0.388 Sum_probs=42.8
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEccc
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSG 372 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 372 (617)
|++++||+|... ..++++++...++|.|+++||+++...... +....|++.+.|
T Consensus 1 ~i~~isD~H~~~---------------~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGSL---------------ELLEKALELFGDVDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCCH---------------HHHHHHHHHhcCCCEEEECCccccccccch-----------hhcCCcEEEEeC
Confidence 589999998542 345666666556999999999996432211 234679999999
Q ss_pred CCCCC
Q 007133 373 NHERD 377 (617)
Q Consensus 373 NHD~~ 377 (617)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99974
No 36
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.87 E-value=5.1e-08 Score=97.79 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
+|++++||+|.... . ... +.++. .+||+|+++||++... .++.+.+..+ ..|+++++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999996421 1 112 23343 5799999999998421 1233333333 47899999
Q ss_pred cCCCCCC
Q 007133 372 GNHERDW 378 (617)
Q Consensus 372 GNHD~~~ 378 (617)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999864
No 37
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.83 E-value=1.9e-08 Score=104.00 Aligned_cols=78 Identities=12% Similarity=0.075 Sum_probs=55.3
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
...++++.++|+|.... .....+.+.++.+ ..+|+|+.+||+++. .....+.+..+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34589999999998642 1111233344444 567999999999974 12234466677778888899999
Q ss_pred EcccCCCCCC
Q 007133 369 IGSGNHERDW 378 (617)
Q Consensus 369 ~v~GNHD~~~ 378 (617)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.83 E-value=2.7e-08 Score=91.52 Aligned_cols=117 Identities=23% Similarity=0.359 Sum_probs=75.9
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEccc
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSG 372 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 372 (617)
||+++||+|.... .+ ...++|+|+++||+++. +...+++.+.+.++.+. ..++++++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999986420 11 22679999999999954 33444555555555442 223578999
Q ss_pred CCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccC
Q 007133 373 NHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRR 452 (617)
Q Consensus 373 NHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~ 452 (617)
|||... . . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--~ 67 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--E 67 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C--C
Confidence 999630 0 1 1
Q ss_pred CCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 453 KQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 453 ~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
.+.|+++|.|+ +...... ... ...+.+.+..++++++++++|+||+|...
T Consensus 68 --~~~ilv~H~~p-~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 68 --DTDILVTHGPP-YGHLDLV-SSG---QRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CCEEEEECCCC-CcCcccc-ccC---cccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 23688899998 7653221 100 11224577888889999999999999963
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.71 E-value=2e-06 Score=83.21 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=41.9
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEccc
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSG 372 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 372 (617)
+++++||+|...... .....+.+++++ .++|.|+|+||+++ . +..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 489999999654211 112345555554 57999999999984 1 222233332 247899999
Q ss_pred CCCCC
Q 007133 373 NHERD 377 (617)
Q Consensus 373 NHD~~ 377 (617)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
No 40
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.70 E-value=6e-08 Score=98.36 Aligned_cols=181 Identities=16% Similarity=0.203 Sum_probs=93.4
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh-cCCCcEEEEcCccccCC-C---cHhHHHHHHHhhhhhhcC-CC
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD-LSNIDIVFHIGDITYAN-G---YISQWDQFTAQVEPIAST-VP 366 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~pDfvl~~GDi~Y~~-g---~~~~wd~f~~~i~~l~~~-vP 366 (617)
|+++++|+|.+... +.....+.+.++. ..++|+|+++||+++.- | .........+.++.+... +|
T Consensus 2 ~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~ 72 (241)
T PRK05340 2 PTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVP 72 (241)
T ss_pred cEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCe
Confidence 78999999986421 1112223333322 35799999999999631 1 112223455556666544 89
Q ss_pred eEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007133 367 YMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCL 446 (617)
Q Consensus 367 ~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L 446 (617)
++.++||||.... ..+. .++|+. .+|. ...++.++.++++.-.... ......++++++.+
T Consensus 73 v~~v~GNHD~~~~---~~~~-----~~~g~~-----~l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~ 132 (241)
T PRK05340 73 CYFMHGNRDFLLG---KRFA-----KAAGMT-----LLPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKV 132 (241)
T ss_pred EEEEeCCCchhhh---HHHH-----HhCCCE-----EeCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHHH
Confidence 9999999997421 1110 011110 1111 1345667766665532211 11234455555544
Q ss_pred HhcccCCCCEEEEEecccCccCCCC------------CCC-CCCCccchhhHHHHHHHHHHcCCcEEEecCccccee
Q 007133 447 ASVDRRKQPWLIFAAHRVLGYSSDY------------WYG-QEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYER 510 (617)
Q Consensus 447 ~~~~r~~~pw~Iv~~H~P~~yss~~------------~~~-~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 510 (617)
.+ ||.+.+.|.++ +.... ... ....+.+.. .+.+.+++.+++++++++||+|.-..
T Consensus 133 r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 133 RN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDVN-PEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred hC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCCC-HHHHHHHHHHhCCCEEEECcccCcce
Confidence 33 12233333333 21100 000 000011111 45788899999999999999998543
No 41
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.70 E-value=3.9e-07 Score=86.20 Aligned_cols=63 Identities=22% Similarity=0.349 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.|+++++|+|.... ....+.++++...++|.|+++||++. .+..+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 47999999996421 12344455554348999999999981 1223333332 45899999
Q ss_pred cCCCC
Q 007133 372 GNHER 376 (617)
Q Consensus 372 GNHD~ 376 (617)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
No 42
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.70 E-value=5e-08 Score=94.89 Aligned_cols=48 Identities=15% Similarity=0.262 Sum_probs=34.6
Q ss_pred CCCcEEEEcCccccCCCc--HhHHHHHHHhhhhh---hcCCCeEEcccCCCCC
Q 007133 330 SNIDIVFHIGDITYANGY--ISQWDQFTAQVEPI---ASTVPYMIGSGNHERD 377 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l---~~~vP~~~v~GNHD~~ 377 (617)
.+||+|+++||+++.... ..+|.+.++.+.++ -..+|++.++||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 589999999999976543 23454444444443 2368999999999986
No 43
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.64 E-value=3.1e-07 Score=100.83 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=103.7
Q ss_pred HHHHHHHhcCCCcEEEEcCccccCCCc----H---hHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCc
Q 007133 321 TTDQLIRDLSNIDIVFHIGDITYANGY----I---SQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGE 393 (617)
Q Consensus 321 ~~~~l~~~~~~pDfvl~~GDi~Y~~g~----~---~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge 393 (617)
++++|.+...++|+|+++||++-.+.. + .......+.+......+|+++++||||....+.-. .......
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~---~~~~~~~ 276 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFA---PGSVPKR 276 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcC---CCCCcch
Confidence 455555555569999999999965421 1 11223444556666799999999999986432210 0000000
Q ss_pred cCcc--ccc---ee--ccCCCC----CCCeEEEE-EeCCEEEEEEeCCCCCC----------CCHHHHHHHHHHHHhccc
Q 007133 394 CGVP--AET---MF--YVPAEN----RAKFWYST-DYGMFHFCIADTEHDWR----------EGSEQYRFIEQCLASVDR 451 (617)
Q Consensus 394 ~g~~--~~~---~f--~~P~~~----~~~~yYsf-d~G~v~fi~LDt~~~~~----------~g~~Q~~WL~~~L~~~~r 451 (617)
.... |+. .| .+|.+. ..+.+|.- -+++.++|+||+..... ...+|++|+..+|.+++.
T Consensus 277 ~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~ 356 (577)
T KOG3770|consen 277 HSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES 356 (577)
T ss_pred hhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh
Confidence 0000 000 01 134321 12344544 46889999999975322 246889999999998764
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcC--CcEEEecCcccceee
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYK--VDIAFFGHVHNYERT 511 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~YeRt 511 (617)
+... |=+++|.|++- . .. .......+-.++.++. +...|.||.|.-+..
T Consensus 357 ~Gek-Vhil~HIPpG~-~--------~c-~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 357 AGEK-VHILGHIPPGD-G--------VC-LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred cCCE-EEEEEeeCCCC-c--------ch-hhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 4443 77899999821 1 11 1112445666666663 556799999996644
No 44
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.59 E-value=2.9e-07 Score=89.87 Aligned_cols=177 Identities=16% Similarity=0.228 Sum_probs=87.8
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHH-------------------
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWD------------------- 352 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd------------------- 352 (617)
=++++++|..... ..++.+..++.+ .++|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 4789999985431 123444555555 58999999999997766666776
Q ss_pred -------HHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCC--CCCCCeEEEEEeCCEEE
Q 007133 353 -------QFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPA--ENRAKFWYSTDYGMFHF 423 (617)
Q Consensus 353 -------~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~--~~~~~~yYsfd~G~v~f 423 (617)
.|++.+..+ .+|.+++|||||-.. ..|+. .++....-.|. .-... +.+--|.+.+
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~---~~~lr---------~a~~~e~v~p~~~~vH~s--f~~~~g~y~v 136 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE---RFFLR---------EAYNAEIVTPHIHNVHES--FFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH---HHHHH---------HHHHCCCC-TTEEE-CTC--EEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH---HHHHH---------HHhccceeccceeeeeee--ecccCCcEEE
Confidence 666666544 899999999999631 00110 00000000110 00001 1222344666
Q ss_pred EEEeCCCC---CCC------CHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH
Q 007133 424 CIADTEHD---WRE------GSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK 494 (617)
Q Consensus 424 i~LDt~~~---~~~------g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k 494 (617)
+.+-.+.. ... ..-..+|..+.|..+ +..-+|++.|.|+-+..+ . ...+.+.+..++++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg-----~----~h~GS~~V~dlIk~ 204 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKG-----L----IHVGSAAVRDLIKT 204 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTC-----T----BTTSBHHHHHHHHH
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCC-----c----ccccHHHHHHHHHh
Confidence 66643321 000 112335555666664 233478889999711111 0 12235689999999
Q ss_pred cCCcEEEecCcccce
Q 007133 495 YKVDIAFFGHVHNYE 509 (617)
Q Consensus 495 ~~VdlvlsGH~H~Ye 509 (617)
|+.+++|+||+|--.
T Consensus 205 ~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 205 YNPDIVLCGHIHESH 219 (255)
T ss_dssp H--SEEEE-SSS-EE
T ss_pred cCCcEEEecccccch
Confidence 999999999999854
No 45
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.58 E-value=5.2e-06 Score=81.41 Aligned_cols=175 Identities=17% Similarity=0.284 Sum_probs=99.3
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccC--CCcHhHHHHHHHhhhhhh-cCC
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYA--NGYISQWDQFTAQVEPIA-STV 365 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~--~g~~~~wd~f~~~i~~l~-~~v 365 (617)
.+|++++.|.|... ..++++++.. .++|+++.+||++|. ..... -.+-. .++.+. ..+
T Consensus 3 ~mkil~vtDlHg~~---------------~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~-~~~~~-~~e~l~~~~~ 65 (226)
T COG2129 3 KMKILAVTDLHGSE---------------DSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEV-AEELN-KLEALKELGI 65 (226)
T ss_pred cceEEEEeccccch---------------HHHHHHHHHHhhccCCEEEEecceehhhcCchHH-HHhhh-HHHHHHhcCC
Confidence 37999999998653 2334443322 489999999999943 22111 11100 034444 489
Q ss_pred CeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCC--CCC----CCCH-HH
Q 007133 366 PYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTE--HDW----REGS-EQ 438 (617)
Q Consensus 366 P~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~--~~~----~~g~-~Q 438 (617)
|+++++||-|-..-. .... . .++.. .+ -+.+.|++.|+.+--. ..| ...+ +=
T Consensus 66 ~v~avpGNcD~~~v~--~~l~---~---~~~~v-----------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I 124 (226)
T COG2129 66 PVLAVPGNCDPPEVI--DVLK---N---AGVNV-----------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEI 124 (226)
T ss_pred eEEEEcCCCChHHHH--HHHH---h---ccccc-----------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHH
Confidence 999999998743100 0000 0 00000 01 3456777777764211 111 1122 22
Q ss_pred HHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCccccee
Q 007133 439 YRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYER 510 (617)
Q Consensus 439 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 510 (617)
+.-|++-+++.+ .+-.|++.|.|+ |..... ...+ ....+...+..++++.++-+.++||.|-+.-
T Consensus 125 ~s~l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 125 YSKLKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 344555555432 121399999999 765432 1111 1355678999999999999999999998543
No 46
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.58 E-value=4.6e-07 Score=85.75 Aligned_cols=56 Identities=18% Similarity=0.384 Sum_probs=38.5
Q ss_pred HHHHHHHhcCCCcEEEEcCccccCCC--cHhHHHHHHHhhhhhhc---CCCeEEcccCCCCC
Q 007133 321 TTDQLIRDLSNIDIVFHIGDITYANG--YISQWDQFTAQVEPIAS---TVPYMIGSGNHERD 377 (617)
Q Consensus 321 ~~~~l~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~~---~vP~~~v~GNHD~~ 377 (617)
.++++++. .+||+|+++||+++... ...+|.++...+..+.. .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34445544 58999999999997532 23456555555544432 58999999999974
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.58 E-value=2.5e-07 Score=84.67 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=33.4
Q ss_pred EEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 457 LIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 457 ~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
+|+++|+|+ +.... ... . ...+.+.+..++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 578888887 54321 111 1 1123668888999999999999999986544
No 48
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.57 E-value=1.1e-06 Score=82.43 Aligned_cols=184 Identities=16% Similarity=0.183 Sum_probs=93.2
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
++.+++|+|....-. .+..-|.++....=++|.++ ...=|.|+..|||+.+..-+.. .+=++.+..+ ..+ -+
T Consensus 2 ~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~L-PG~-K~ 77 (230)
T COG1768 2 RIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-EEDLRFIGDL-PGT-KY 77 (230)
T ss_pred ceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhh-hhhhhhhhcC-CCc-EE
Confidence 466777777653211 22222333322222333332 2345899999999987543211 1112333322 122 46
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCC-CCCeEEEEEeCCEEEEEE---eCC-CCCCCCHHHH----
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAEN-RAKFWYSTDYGMFHFCIA---DTE-HDWREGSEQY---- 439 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~-~~~~yYsfd~G~v~fi~L---Dt~-~~~~~g~~Q~---- 439 (617)
.+.|||||.|+.....- -.+|..- .-+ -.|.++++.++.. |+. .++.+-++|-
T Consensus 78 m~rGNHDYWw~s~skl~----------------n~lp~~l~~~n--~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~ 139 (230)
T COG1768 78 MIRGNHDYWWSSISKLN----------------NALPPILFYLN--NGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIF 139 (230)
T ss_pred EEecCCccccchHHHHH----------------hhcCchHhhhc--cceeEeeEEEEEeecccCCCCCcCccchhHHHHH
Confidence 79999999775221100 0111100 000 1245555444432 222 2233333332
Q ss_pred ----HHHHH-HHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeec
Q 007133 440 ----RFIEQ-CLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTC 512 (617)
Q Consensus 440 ----~WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 512 (617)
.-|+. .++++ ++...-.|||.|.|+ ++... . ...+.+++++++|+.++.||.|--.|-.
T Consensus 140 ~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP-~s~~~---t---------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 140 LREIGRLRLSADAAL-PKGVSKFIVMTHYPP-FSDDG---T---------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred HHHHHHHHHHHHHhc-ccCcCeEEEEEecCC-CCCCC---C---------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 23333 22233 233445899999998 76532 1 1245677779999999999999977653
No 49
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.50 E-value=2.5e-07 Score=88.84 Aligned_cols=56 Identities=18% Similarity=0.430 Sum_probs=39.0
Q ss_pred HHHHHHHhcCCCcEEEEcCccccCCCc--HhHHHHHHHhhhhhh-------cCCCeEEcccCCCCC
Q 007133 321 TTDQLIRDLSNIDIVFHIGDITYANGY--ISQWDQFTAQVEPIA-------STVPYMIGSGNHERD 377 (617)
Q Consensus 321 ~~~~l~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~-------~~vP~~~v~GNHD~~ 377 (617)
++.++++. .+||+|+++||+++.... ..+|.+..+.+..+. ..+|++.++||||+.
T Consensus 36 ~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 36 AFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 44555543 689999999999975432 245665555444433 268999999999985
No 50
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.47 E-value=3.6e-07 Score=91.66 Aligned_cols=137 Identities=23% Similarity=0.342 Sum_probs=80.7
Q ss_pred CCCcEEEEcCccccCCCc---------------------HhHHH----HHH--HhhhhhhcCCCeEEcccCCCCCCCCCC
Q 007133 330 SNIDIVFHIGDITYANGY---------------------ISQWD----QFT--AQVEPIASTVPYMIGSGNHERDWPNSG 382 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g~---------------------~~~wd----~f~--~~i~~l~~~vP~~~v~GNHD~~~~~~g 382 (617)
.++|++||+||.+|++.. ...+. .+. ..++.+.+++|++.++.+||+..+..+
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 789999999999998742 11222 221 124566779999999999999743221
Q ss_pred CccCCCCCCCccCc--------cccceeccCCC-----CCCCeEEEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHHh
Q 007133 383 SFYDTTDSGGECGV--------PAETMFYVPAE-----NRAKFWYSTDYGMF-HFCIADTEHDWREGSEQYRFIEQCLAS 448 (617)
Q Consensus 383 ~~y~~~ds~ge~g~--------~~~~~f~~P~~-----~~~~~yYsfd~G~v-~fi~LDt~~~~~~g~~Q~~WL~~~L~~ 448 (617)
. ...... ..... .|......+.. .....|++|.+|.. .|++||+....
T Consensus 108 ~-~~~~~~-~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R---------------- 169 (228)
T cd07389 108 D-GAWVQD-SPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR---------------- 169 (228)
T ss_pred c-cccccC-cchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc----------------
Confidence 1 000000 00000 11111111111 23568999999996 99999998653
Q ss_pred cccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCc--EEEecCcccceee
Q 007133 449 VDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVD--IAFFGHVHNYERT 511 (617)
Q Consensus 449 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vd--lvlsGH~H~YeRt 511 (617)
+.|.+ + +..|+.+..++.+.++. ++|+|++|.-+-.
T Consensus 170 ---------------------d~W~~----~--~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 ---------------------DSWDG----Y--PAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred ---------------------ccccc----c--HHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 22311 1 11277787776665433 8899999985533
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.45 E-value=2.4e-06 Score=86.05 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=45.8
Q ss_pred EEEeecCCCcCCCCcccccCCCCchh-HHHHHHHhcCCCcEEEEcCccccC----CCcHhHHHHHHHhhhhhhc-CCCeE
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLN-TTDQLIRDLSNIDIVFHIGDITYA----NGYISQWDQFTAQVEPIAS-TVPYM 368 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~pDfvl~~GDi~Y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 368 (617)
++++|+|.+... +...+ .++.+.+...+||+|+++||+++. +......+++.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999986421 11112 233333322479999999999962 1112222344555666554 58999
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.44 E-value=1.3e-05 Score=77.75 Aligned_cols=71 Identities=15% Similarity=0.251 Sum_probs=43.3
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcH---h--HHHHHHHhhhhhhcCCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYI---S--QWDQFTAQVEPIASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~---~--~wd~f~~~i~~l~~~vP 366 (617)
.|++++||+|.+. + .++.+.+.+++ .++|.|+++||++...... . ..++..+.++.+ ..+
T Consensus 1 mri~viSD~Hg~~-----------~-~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL-----------P-ATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH-----------H-HHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 3799999999532 1 12233333332 6799999999999632210 0 112333434332 468
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
No 53
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.36 E-value=6.6e-06 Score=89.20 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=51.1
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCc-HhHHHHHHHhhhh-------
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGY-ISQWDQFTAQVEP------- 360 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~------- 360 (617)
.+||++++|+|.+..... . ........+++++++. ..++|+||++||+.+.... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~-~--~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGEND-P--VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccCC-c--hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 389999999998742110 0 0011123455665543 2679999999999976432 1222233333332
Q ss_pred -----h----------------------hcCCCeEEcccCCCCC
Q 007133 361 -----I----------------------ASTVPYMIGSGNHERD 377 (617)
Q Consensus 361 -----l----------------------~~~vP~~~v~GNHD~~ 377 (617)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1279999999999974
No 54
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.35 E-value=2.4e-05 Score=81.00 Aligned_cols=198 Identities=15% Similarity=0.135 Sum_probs=92.0
Q ss_pred eEEEEEeecCCCcCC-CCcccccCCCCchhHHHHHHHhc--CCCcEEEE-cCccccCCCcHhHHH---------HHHHhh
Q 007133 292 QRVVIFGDMGKAERD-GSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFH-IGDITYANGYISQWD---------QFTAQV 358 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~-~GDi~Y~~g~~~~wd---------~f~~~i 358 (617)
++|+.++|+|..-.. +...-.....+....+..++++. .+++.++. +||++.... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 478999999954211 00000000112344455555542 35777766 999996432 12221 122233
Q ss_pred hhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCcccc--ceeccC-CCCCCCeEEEEEeC-CEEE--EEEeCCCC-
Q 007133 359 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAE--TMFYVP-AENRAKFWYSTDYG-MFHF--CIADTEHD- 431 (617)
Q Consensus 359 ~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~--~~f~~P-~~~~~~~yYsfd~G-~v~f--i~LDt~~~- 431 (617)
..+ ... +.++||||+++... .+...- .+.+.++- +..... .......|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKVI--KQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHHH--HhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 333 56789999874211 110000 00011110 000000 00112346667888 7555 44433221
Q ss_pred -C-----------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCc
Q 007133 432 -W-----------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVD 498 (617)
Q Consensus 432 -~-----------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~Vd 498 (617)
+ ....+..++..+.|++ .+...+|+++|... ..... . . ...++....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~--~--~----~~~~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE--E--S----LTGENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc--c--c----cCCccHHHHHHhcCCCCc
Confidence 1 0111234444444543 46778999999886 22100 0 0 0002223344444 5899
Q ss_pred EEEecCcccce
Q 007133 499 IAFFGHVHNYE 509 (617)
Q Consensus 499 lvlsGH~H~Ye 509 (617)
++|.||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999854
No 55
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.29 E-value=6e-06 Score=84.09 Aligned_cols=188 Identities=14% Similarity=0.060 Sum_probs=88.3
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
++|+.++|+|..-.+ . -+.+....+..++++. .++| +++..||++...... .+.+....++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~-~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPS-TATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccch-hccCCcHHHHHHHhcCCCE
Confidence 479999999943210 0 0112344455555542 3577 779999999654331 1211111222222222455
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCcccc--ceecc---CCCCCCCeEEEEEeCCEE--EEEEeCCCCCC---C----
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAE--TMFYV---PAENRAKFWYSTDYGMFH--FCIADTEHDWR---E---- 434 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~--~~f~~---P~~~~~~~yYsfd~G~v~--fi~LDt~~~~~---~---- 434 (617)
+++||||+++... .+... -.+.+.++. ..... ........|.-++.++++ |+.+.+..... +
T Consensus 74 ~~~GNHe~d~g~~--~l~~~--~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 74 VTIGNHEFDYGLD--ALAEL--YKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred EeeccccccccHH--HHHHH--HHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 6789999874211 00000 000011110 00000 000012335566778755 45544332110 0
Q ss_pred ---CHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCccccee
Q 007133 435 ---GSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYER 510 (617)
Q Consensus 435 ---g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 510 (617)
-....+-+++..+. .+.+...+|++.|.+. .. ...+...+ .+||++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~-~~----------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGL-DD----------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCc-cc----------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 01223334332222 2256778999999886 10 11222212 6899999999999654
No 56
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.28 E-value=1.1e-05 Score=82.66 Aligned_cols=186 Identities=18% Similarity=0.154 Sum_probs=89.7
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHhHH---HHHHHhhhhhhcCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYISQW---DQFTAQVEPIASTV 365 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~v 365 (617)
++++.+.|+|.-.... .. +.+....+..++++. .+++ +++.+||++..... ..+ +...+.+..+ ..
T Consensus 1 ~~il~~nd~~~~~~~~---~~--~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPLD---GG--PVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeecccC---CC--CcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhc--CC
Confidence 4788999998322110 00 112344555555542 3567 99999999954322 122 1222222221 22
Q ss_pred CeEEcccCCCCCCCCCCCccCCCCCCCccCccccc-eeccCCC-C---CCCeEEEEEeCCEE--EEEEeCCCCC------
Q 007133 366 PYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAET-MFYVPAE-N---RAKFWYSTDYGMFH--FCIADTEHDW------ 432 (617)
Q Consensus 366 P~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~-~f~~P~~-~---~~~~yYsfd~G~v~--fi~LDt~~~~------ 432 (617)
-+.++||||++.... .+...- .+.+.++.. ....... . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~~--~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKRL--GESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHHH--hhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 366899999864211 110000 011111100 0000000 0 12457778888855 5555544211
Q ss_pred CCC---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 433 REG---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 433 ~~g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
..+ .+-.+.+++.++...+.+...+|++.|-+. .. . + .+...+ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~~-------------d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-PN-------------D--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-hh-------------h--H-HHHHhC--CCCceEEecccceeE
Confidence 000 122233444333332356778999999875 10 0 1 222222 589999999999866
No 57
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.27 E-value=3.2e-06 Score=82.18 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.1
Q ss_pred cCCCcEEEEcCccccCCCc--HhHHH----HHHHhhhhh----------------hcCCCeEEcccCCCCCC
Q 007133 329 LSNIDIVFHIGDITYANGY--ISQWD----QFTAQVEPI----------------ASTVPYMIGSGNHERDW 378 (617)
Q Consensus 329 ~~~pDfvl~~GDi~Y~~g~--~~~wd----~f~~~i~~l----------------~~~vP~~~v~GNHD~~~ 378 (617)
..+||.|+++||+... +. ..+|. +|.+.+-+- ...+|++.++||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 4689999999999953 33 33443 333322110 01489999999999963
No 58
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.22 E-value=7e-05 Score=76.43 Aligned_cols=197 Identities=16% Similarity=0.191 Sum_probs=98.8
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCC-CcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYAN-GYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
|++++||.=... |. ......+.++.++ .++||++..||++-.. +.. ....+.+.. ..+-+ ++.
T Consensus 1 ~ilfigdi~g~~--G~-------~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~--~G~D~-iTl 64 (255)
T cd07382 1 KILFIGDIVGKP--GR-------KAVKEHLPKLKKE-YKIDFVIANGENAAGGKGIT---PKIAKELLS--AGVDV-ITM 64 (255)
T ss_pred CEEEEEeCCCHH--HH-------HHHHHHHHHHHHH-CCCCEEEECCccccCCCCCC---HHHHHHHHh--cCCCE-EEe
Confidence 588999983221 00 0011233334332 4699999999998543 222 122222222 13444 455
Q ss_pred cCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHHHHhc
Q 007133 372 GNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADT--EHDWREGSEQYRFIEQCLASV 449 (617)
Q Consensus 372 GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt--~~~~~~g~~Q~~WL~~~L~~~ 449 (617)
||||++....-.+++..+ .+.. --++|.......|.-++.+++++-+++- ......-..-++-+++.+++.
T Consensus 65 GNH~fD~gel~~~l~~~~------~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~l 137 (255)
T cd07382 65 GNHTWDKKEILDFIDEEP------RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEEL 137 (255)
T ss_pred cccccCcchHHHHHhcCc------CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHH
Confidence 999998542112221110 0110 0122322223457778888876555443 221111112234466666655
Q ss_pred ccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccC
Q 007133 450 DRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTG 529 (617)
Q Consensus 450 ~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~ 529 (617)
.. +...+||.+|--. ++ + +..+.. ...-+||+++.||.|..--- .+..
T Consensus 138 k~-~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~il--------- 185 (255)
T cd07382 138 KE-EADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERIL--------- 185 (255)
T ss_pred hc-CCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCc-----cEEe---------
Confidence 42 5678999999642 11 1 223332 22346999999999994211 1111
Q ss_pred CCCceEEEE-ECCCCCC
Q 007133 530 TVNGTIHVV-VGGGGSH 545 (617)
Q Consensus 530 ~~~g~v~iv-~G~gG~~ 545 (617)
++|+.|+. +|+-|..
T Consensus 186 -~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 186 -PGGTAYITDVGMTGPY 201 (255)
T ss_pred -eCCeEEEecCccccCC
Confidence 35777777 6666653
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.16 E-value=5.4e-06 Score=82.22 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=44.8
Q ss_pred EEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCC-----CcHhHHHHH-HHhhhhhhcCCC
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYAN-----GYISQWDQF-TAQVEPIASTVP 366 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~-----g~~~~wd~f-~~~i~~l~~~vP 366 (617)
++++|+|.+.... ........++... .++|.++++||+++.- ......... ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999875421 1112233333322 4899999999999631 111112222 333444456899
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.13 E-value=8e-05 Score=76.39 Aligned_cols=165 Identities=19% Similarity=0.268 Sum_probs=87.5
Q ss_pred CCCcEEEEcCccccCCCcH-----------hHHHHHHHhhhhhh-cCCCeEEcccCCCCCCCCCCCccCCCCCCCccCcc
Q 007133 330 SNIDIVFHIGDITYANGYI-----------SQWDQFTAQVEPIA-STVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVP 397 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g~~-----------~~wd~f~~~i~~l~-~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~ 397 (617)
.++|++|.+||+.-..... ..+..|.+.++... ..+|.+++.||||-. .++.....+++.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v--- 98 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEAS-----NYLWELPYGGWV--- 98 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCH-----HHHHhhcCCCee---
Confidence 4699999999996332111 12333444443322 367779999999952 112111111211
Q ss_pred ccceeccCCCCCCCeEEEEEeCCEEEEEEeCCC---CCCC--------CHHHHHHH-------HHHHHhcccCCCCEEEE
Q 007133 398 AETMFYVPAENRAKFWYSTDYGMFHFCIADTEH---DWRE--------GSEQYRFI-------EQCLASVDRRKQPWLIF 459 (617)
Q Consensus 398 ~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~---~~~~--------g~~Q~~WL-------~~~L~~~~r~~~pw~Iv 459 (617)
-.+.+.+.. ...+++++++|..|.... ++.. ...+...+ ...|... +.+--|+
T Consensus 99 ~~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIl 169 (262)
T cd00844 99 APNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIF 169 (262)
T ss_pred cCcEEEecC------CCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEE
Confidence 001111111 124567889999887532 1111 12222221 1112221 1122599
Q ss_pred EecccCccCCCCCCCCC-------CCcc-----chhhHHHHHHHHHHcCCcEEEecCccc-ceeecc
Q 007133 460 AAHRVLGYSSDYWYGQE-------GSFE-----EPMGRESLQRLWQKYKVDIAFFGHVHN-YERTCP 513 (617)
Q Consensus 460 ~~H~P~~yss~~~~~~~-------g~~~-----~~~~r~~l~~Ll~k~~VdlvlsGH~H~-YeRt~p 513 (617)
+.|.|+ +.-... +.. ..+. ...+...+..|+++.+....|+||.|. |++..|
T Consensus 170 LSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 170 LSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred EeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecC
Confidence 999998 554221 110 0000 133466888999999999999999999 777754
No 61
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.11 E-value=0.00014 Score=74.53 Aligned_cols=195 Identities=12% Similarity=0.107 Sum_probs=105.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh---cCCCcEEEEcCccccCC-CcHhHHHHHHHhhhhhhcCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD---LSNIDIVFHIGDITYAN-GYISQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~ 367 (617)
.|++++||.=.. + -...+...+.+ ..++||++..||++-.. |... +..+.+. ...+-+
T Consensus 1 m~ilfiGDi~G~------------~-Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~--~~GvDv 62 (266)
T TIGR00282 1 IKFLFIGDVYGK------------A-GRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL---KIYEFLK--QSGVNY 62 (266)
T ss_pred CeEEEEEecCCH------------H-HHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH---HHHHHHH--hcCCCE
Confidence 379999998422 1 12333333332 24799999999999432 2221 1222222 125555
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCC-CC-CC--CHHHHHHHH
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEH-DW-RE--GSEQYRFIE 443 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~-~~-~~--g~~Q~~WL~ 443 (617)
++. |||+++... .+...+.. +.. .....+|....+..|..++.++.++-+++-.. .+ .+ ...-++-++
T Consensus 63 iT~-GNH~~Dkge---~~~~i~~~--~~~--lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d 134 (266)
T TIGR00282 63 ITM-GNHTWFQKL---ILDVVINQ--KDL--VRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLK 134 (266)
T ss_pred EEc-cchhccCcH---HHHHHhcc--ccc--cccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHH
Confidence 555 999998532 11111110 100 01113333223444666788887766665321 11 11 111223345
Q ss_pred HHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCC
Q 007133 444 QCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTE 523 (617)
Q Consensus 444 ~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 523 (617)
+.+++.+ .+++.+||.+|.-- .. .+.....+.+.+|++|+.-|.|.--- +.++.
T Consensus 135 ~~i~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~Ta-----D~~il--- 188 (266)
T TIGR00282 135 ELINMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTA-----DLRIL--- 188 (266)
T ss_pred HHHHhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCC-----cceeC---
Confidence 5555443 24678999999542 11 23456667788999999999999321 11111
Q ss_pred cccccCCCCceEEEE-ECCCCCC
Q 007133 524 KYHYTGTVNGTIHVV-VGGGGSH 545 (617)
Q Consensus 524 ~~~y~~~~~g~v~iv-~G~gG~~ 545 (617)
++||-|++ +|+-|..
T Consensus 189 -------~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 189 -------PKGTAYITDVGMTGPF 204 (266)
T ss_pred -------CCCCEEEecCCcccCc
Confidence 36888988 7888864
No 62
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.00 E-value=0.00037 Score=72.69 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=42.9
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCC-cEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe-
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNI-DIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY- 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~- 367 (617)
++|+.++|+|..-.... ....-..+....+..++++. .++ .+++..||++......+.+.+-...++ ++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~-~~n~~g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIE-ALNAMGVD 78 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHH-HHHhhCCe
Confidence 47899999995422100 00000122345556555542 234 489999999954443222111001111 2222333
Q ss_pred EEcccCCCCCC
Q 007133 368 MIGSGNHERDW 378 (617)
Q Consensus 368 ~~v~GNHD~~~ 378 (617)
+.++||||+++
T Consensus 79 a~t~GNHefd~ 89 (288)
T cd07412 79 ASAVGNHEFDE 89 (288)
T ss_pred eeeeccccccc
Confidence 56789999975
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.90 E-value=0.00015 Score=74.54 Aligned_cols=189 Identities=12% Similarity=0.087 Sum_probs=89.5
Q ss_pred eEEEEEeecCCCcCCCC---------cccccCCCCchhHHHHHHHhc--C-CCcEE-EEcCccccCCCcHhHHHHHHHhh
Q 007133 292 QRVVIFGDMGKAERDGS---------NEYSNYQPGSLNTTDQLIRDL--S-NIDIV-FHIGDITYANGYISQWDQFTAQV 358 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~--~-~pDfv-l~~GDi~Y~~g~~~~wd~f~~~i 358 (617)
++|+.++|+|..-.... ..+. +.+.+..+..++++. . ++|.+ +.+||+...... ..+.+.. .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~--~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFG--MAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCcccccccccccccccccc--ccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46888888886522110 0001 112345556666542 3 68877 579999965432 2222111 12
Q ss_pred hhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCcccc--ceeccC-CCCCCCeEEEEEeCCEE--EEEEeCCCCCC
Q 007133 359 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAE--TMFYVP-AENRAKFWYSTDYGMFH--FCIADTEHDWR 433 (617)
Q Consensus 359 ~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~--~~f~~P-~~~~~~~yYsfd~G~v~--fi~LDt~~~~~ 433 (617)
-..+..+++.++.||||++.... .+.... .+.+.++- ....-. ....-+.|.-++.++++ ||.+.+.....
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~--~l~~~~--~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPE--RVRELF--GRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHH--HHHHHH--hhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 22233466666559999874211 000000 00011110 000000 00011235567788854 56665432100
Q ss_pred --C-----C---HHHHHHHHHHHHhcc-cCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEE
Q 007133 434 --E-----G---SEQYRFIEQCLASVD-RRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAF 501 (617)
Q Consensus 434 --~-----g---~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~Vdlvl 501 (617)
+ + ....+.+++.+++.. ..+...+|++.|-+. .. . + .+ .++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~l---a~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-EL---AERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-HH---HhcCCCCcEEE
Confidence 0 0 223444554433321 245678999999775 10 0 1 11 222 5799999
Q ss_pred ecCcccc
Q 007133 502 FGHVHNY 508 (617)
Q Consensus 502 sGH~H~Y 508 (617)
.||.|..
T Consensus 213 gGH~H~~ 219 (264)
T cd07411 213 SGHTHER 219 (264)
T ss_pred eCccccc
Confidence 9999974
No 64
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.85 E-value=0.00029 Score=73.31 Aligned_cols=201 Identities=15% Similarity=0.116 Sum_probs=87.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc-------CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc-
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL-------SNIDIVFHIGDITYANGYISQWDQFTAQVEPIAS- 363 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~- 363 (617)
++++.++|+|..-... . ...+.+..+..++++. ...-+++..||+..... .+.+.+-...++ ++.
T Consensus 1 ltIl~tnD~Hg~l~~~----~-~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~-~~~~~~g~~~~~-~~n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWPN----G-TGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVP-ESDLQDAEPDFR-GMNL 73 (285)
T ss_pred CEEEEEcccccccccC----C-CCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCch-hHHhcCcchHHH-HHHh
Confidence 4789999999753211 0 1122334444444431 22348889999984332 222211111111 122
Q ss_pred -CCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEE--EEEEeCCCC---CCC---
Q 007133 364 -TVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFH--FCIADTEHD---WRE--- 434 (617)
Q Consensus 364 -~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~--fi~LDt~~~---~~~--- 434 (617)
..- ..++||||+++... .+........+.......+.......-+.|.-++.++++ ||.+-+... ..+
T Consensus 74 ~g~D-a~~~GNHEfD~G~~--~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~ 150 (285)
T cd07405 74 VGYD-AMAVGNHEFDNPLE--VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYF 150 (285)
T ss_pred hCCc-EEeecccccccCHH--HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCc
Confidence 233 44779999985321 111000000000000011100000112345667788766 455543221 011
Q ss_pred -C---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 435 -G---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 435 -g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
+ .+..+=+++.+++....+..-+|++.|-.. .... ..... .+. ...+...+...+||++|.||.|...
T Consensus 151 ~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 151 EGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 1 111112222222222135677999999875 3211 00100 011 1233333323589999999999954
No 65
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.82 E-value=4.8e-05 Score=75.48 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=42.9
Q ss_pred EEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc----------CCCcEEEEcCccccCCCcHhHHHHHHHhhhhh---
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL----------SNIDIVFHIGDITYANGYISQWDQFTAQVEPI--- 361 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--- 361 (617)
+++||+|.. ...++++++.. .+.|.++++||++....... +.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~---~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI---EILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH---HHHHHHHHHHHH
Confidence 478999754 45677777653 25899999999996433322 222322222
Q ss_pred --hcCCCeEEcccCCCCC
Q 007133 362 --ASTVPYMIGSGNHERD 377 (617)
Q Consensus 362 --~~~vP~~~v~GNHD~~ 377 (617)
....++++++||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2357899999999975
No 66
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.81 E-value=0.00037 Score=72.40 Aligned_cols=197 Identities=12% Similarity=0.084 Sum_probs=90.4
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCc----hhHHHHHHHh--cCCCc-EEEEcCccccCCCcHhHHH-HHHHhhhhhh
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGS----LNTTDQLIRD--LSNID-IVFHIGDITYANGYISQWD-QFTAQVEPIA 362 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~----~~~~~~l~~~--~~~pD-fvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~ 362 (617)
.++|+..+|+|..-.... ..... .+. ...++++.+. ..+++ +++..||.+...... .+. .--+.+-.++
T Consensus 5 ~ltILhtnD~Hg~l~~~~-~~~~~-~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~-~~~~~~g~~~~~~m 81 (282)
T cd07407 5 DINFLHTTDTHGWLGGHL-NDPNY-SADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLS-DASPPPGSYSNPIF 81 (282)
T ss_pred eEEEEEEcccccCCcCcC-Ccccc-cCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeece-eeecCCChHHHHHH
Confidence 389999999996421100 00000 011 1222333221 13455 677899999643221 111 0012223334
Q ss_pred cCCCe-EEcccCCCCCCCCCC-CccCCCCCCCccCccc--cceeccCC--C--CCCCeEEEEEeC-CEE--EEEEeCCCC
Q 007133 363 STVPY-MIGSGNHERDWPNSG-SFYDTTDSGGECGVPA--ETMFYVPA--E--NRAKFWYSTDYG-MFH--FCIADTEHD 431 (617)
Q Consensus 363 ~~vP~-~~v~GNHD~~~~~~g-~~y~~~ds~ge~g~~~--~~~f~~P~--~--~~~~~yYsfd~G-~v~--fi~LDt~~~ 431 (617)
..++| .+++||||++....+ ..+... ..+...|+ .+.+.-.. . .....|.-++.+ +++ +|.+-+...
T Consensus 82 N~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~ 159 (282)
T cd07407 82 RMMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFK 159 (282)
T ss_pred HhcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecccc
Confidence 45555 568999999742111 000000 00000111 01100000 0 011235666765 654 566644321
Q ss_pred -------CCCC--HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc-CCc-EE
Q 007133 432 -------WREG--SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY-KVD-IA 500 (617)
Q Consensus 432 -------~~~g--~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~-~Vd-lv 500 (617)
+.+. ..|.+|+.+.|++ .+...+|++.|... .. +. .. .+....+.++. ++| ++
T Consensus 160 ~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~----~~-~~~~~~la~~~~~id~~I 223 (282)
T cd07407 160 GAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DA----EF-KVLHDAIRKIFPDTPIQF 223 (282)
T ss_pred cCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Cc----cH-HHHHHHHHHhCCCCCEEE
Confidence 1111 2333588888874 35677999999875 21 11 11 21222333343 577 79
Q ss_pred EecCcccc
Q 007133 501 FFGHVHNY 508 (617)
Q Consensus 501 lsGH~H~Y 508 (617)
|.||.|..
T Consensus 224 i~GHsH~~ 231 (282)
T cd07407 224 LGGHSHVR 231 (282)
T ss_pred EeCCcccc
Confidence 99999975
No 67
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.81 E-value=0.0018 Score=62.12 Aligned_cols=64 Identities=17% Similarity=0.314 Sum_probs=41.1
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.++++++|+|...+. .....++.. ..++|+|+|+||.+..... ..+. .. -..+++++.
T Consensus 2 m~ilviSDtH~~~~~------------~~~~~~~~~-~~~~d~vih~GD~~~~~~~-~~l~---~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEKALKIFN-LEKVDAVIHAGDSTSPFTL-DALE---GG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhHHHHHhh-hcCCCEEEECCCcCCccch-HHhh---cc-----cccceEEEE
Confidence 589999999975320 112222222 3789999999999964332 1111 10 156889999
Q ss_pred cCCCCC
Q 007133 372 GNHERD 377 (617)
Q Consensus 372 GNHD~~ 377 (617)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.76 E-value=3.8e-05 Score=78.54 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=49.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcH-hHHHHHHHhhhhhhc-C-CC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYI-SQWDQFTAQVEPIAS-T-VP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~-~-vP 366 (617)
+||++++|+|.+..-.... .. ......++++++. ..++|+|+++||+++..... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4899999999875311100 00 0011234444432 25799999999999754322 222334444555433 3 89
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
No 69
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.74 E-value=0.00048 Score=70.57 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=42.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC--CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc-CCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS--NIDIVFHIGDITYANGYISQWDQFTAQVEPIAS-TVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~-~vP~~ 368 (617)
++++.++|+|..-..... +.+....+..++++.. +.++++.+||++.... ...+..-...++.+.. ..-+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 479999999964321000 1223445555555422 5789999999985432 1211111111222211 3444
Q ss_pred EcccCCCCCC
Q 007133 369 IGSGNHERDW 378 (617)
Q Consensus 369 ~v~GNHD~~~ 378 (617)
.++||||+++
T Consensus 74 ~~~GNHefd~ 83 (257)
T cd07408 74 VTPGNHEFDY 83 (257)
T ss_pred EccccccccC
Confidence 4689999974
No 70
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.71 E-value=0.00018 Score=77.04 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=72.3
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCC--CchhHHHHH---HHhcCCCcEEEEcCccccCCC--cHhHHHHHHHhhhhh
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQP--GSLNTTDQL---IRDLSNIDIVFHIGDITYANG--YISQWDQFTAQVEPI 361 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~~~~~l---~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l 361 (617)
+..+|+++++|.|.-....+..+..+-. ..---+.+. .....+||.++++||+.+.+. ...+|.+..+-+..+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 4569999999999865322111110000 000011111 112368999999999996432 245676544445444
Q ss_pred h---cCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC
Q 007133 362 A---STVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHD 431 (617)
Q Consensus 362 ~---~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~ 431 (617)
. .++|.+.++||||.+.... .-.....||.-- -++...+|+.|++.|+++|++..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~~---fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFESV---FGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc------------cchhHHHHHHHh---hcchhhhhccCCceeEEeeehhh
Confidence 3 4799999999999963210 000011222100 02234568999999999998763
No 71
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.71 E-value=0.00065 Score=70.60 Aligned_cols=79 Identities=13% Similarity=0.019 Sum_probs=45.6
Q ss_pred eEEEEEeCCEE--EEEEeCCCC--C-C--CC---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccc
Q 007133 412 FWYSTDYGMFH--FCIADTEHD--W-R--EG---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEE 481 (617)
Q Consensus 412 ~yYsfd~G~v~--fi~LDt~~~--~-~--~g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~ 481 (617)
.|.-++.++++ ||.+-+... . . .+ .+..+.+++.+++....+..-+|++.|-.. .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--~------------- 195 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--E------------- 195 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--h-------------
Confidence 45667888855 455544321 0 0 11 233455666666554345777899999764 0
Q ss_pred hhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 482 PMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 482 ~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
. ...+...+ .+||++|.||.|...
T Consensus 196 ~--d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 196 V--DKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred h--HHHHHHcC--CCCcEEEeCCcCccc
Confidence 0 11222222 589999999999964
No 72
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.66 E-value=5.8e-05 Score=82.07 Aligned_cols=84 Identities=18% Similarity=0.266 Sum_probs=51.3
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcH-hHHHHHHHhhhhhh-cCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYI-SQWDQFTAQVEPIA-STVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~-~~vP~ 367 (617)
+||++++|+|.+... .+..... ......+.++++. ..++||||++||+.+.+... ..-.++.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 489999999998311 0000000 1112334443332 26799999999999754321 22235556666553 48999
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999975
No 73
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.61 E-value=0.00087 Score=82.67 Aligned_cols=196 Identities=15% Similarity=0.122 Sum_probs=90.4
Q ss_pred CCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEE-cCccccCCCcHhHHHHHHHhhhhhhcC
Q 007133 288 QDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFH-IGDITYANGYISQWDQFTAQVEPIAST 364 (617)
Q Consensus 288 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~-~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 364 (617)
+...++|+.++|+|..- . ....+..++++ ..+++.|+. +||++..... ..+.+-...++. +..
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~-----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~-ln~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-D-----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKM-MKE 722 (1163)
T ss_pred CceEEEEEEEeecccCC-C-----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHH-HhC
Confidence 34459999999999432 1 12233333332 146777755 9999854322 211111112222 222
Q ss_pred CC-eEEcccCCCCCCCCCC--CccCCCC--CC----CccCccc--cceeccCCCC---CCCeEEEEEeCCEE--EEEEeC
Q 007133 365 VP-YMIGSGNHERDWPNSG--SFYDTTD--SG----GECGVPA--ETMFYVPAEN---RAKFWYSTDYGMFH--FCIADT 428 (617)
Q Consensus 365 vP-~~~v~GNHD~~~~~~g--~~y~~~d--s~----ge~g~~~--~~~f~~P~~~---~~~~yYsfd~G~v~--fi~LDt 428 (617)
+. -+.++||||+++.... .+..... .. .....|+ .+.+...... ....|.-++.++++ ||.+-+
T Consensus 723 lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 33 3569999999753210 0000000 00 0000111 1111100000 11346667888754 566654
Q ss_pred CCC---CCCC-------HHHHHHHHHHHHhcc-cCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cC
Q 007133 429 EHD---WREG-------SEQYRFIEQCLASVD-RRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YK 496 (617)
Q Consensus 429 ~~~---~~~g-------~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~ 496 (617)
... ..+. .+..+.+++..++.. ..+...+|++.|... ... . ..+ ......|.++ -+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 0110 122233444443332 146778999999875 211 0 001 1122334444 37
Q ss_pred CcEEEecCcccce
Q 007133 497 VDIAFFGHVHNYE 509 (617)
Q Consensus 497 VdlvlsGH~H~Ye 509 (617)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999853
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.59 E-value=9.6e-05 Score=80.67 Aligned_cols=83 Identities=18% Similarity=0.156 Sum_probs=47.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhH-HHHHHHhhhhhh-cCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQ-WDQFTAQVEPIA-STVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~-wd~f~~~i~~l~-~~vP~ 367 (617)
+||++++|+|.+..-.. .... ......++++++. ..+||+|+++||+.+....... ...+.+.+..+. ..+|+
T Consensus 1 mkilh~SDlHlG~~~~~--~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYS--KSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccC--cccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 48999999998742100 0000 0001123333332 2689999999999965332211 122233333333 26899
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
No 75
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.58 E-value=9.3e-05 Score=79.00 Aligned_cols=82 Identities=17% Similarity=0.279 Sum_probs=48.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCC-cH-hHHHHHHHh--hhhhh-cC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANG-YI-SQWDQFTAQ--VEPIA-ST 364 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g-~~-~~wd~f~~~--i~~l~-~~ 364 (617)
+||+.++|+|.+..... .. ........++++++. ..++|+|+++||++.... .. ... .|... ++.+. ..
T Consensus 1 MKilhiSD~HLG~~~~~-~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~-~~~~~~l~~~L~~~g 76 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-PW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTM-NFVREKIFDLLKEAG 76 (340)
T ss_pred CeEEEEeeecCCCcCCC-hh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHH-HHHHHHHHHHHHHCC
Confidence 48999999998743110 00 000012344444432 268999999999996532 21 222 23322 33332 37
Q ss_pred CCeEEcccCCCCC
Q 007133 365 VPYMIGSGNHERD 377 (617)
Q Consensus 365 vP~~~v~GNHD~~ 377 (617)
+|+++++||||..
T Consensus 77 i~v~~I~GNHD~~ 89 (340)
T PHA02546 77 ITLHVLVGNHDMY 89 (340)
T ss_pred CeEEEEccCCCcc
Confidence 9999999999974
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.57 E-value=0.0002 Score=67.11 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=33.9
Q ss_pred hHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccCCC
Q 007133 320 NTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGNHE 375 (617)
Q Consensus 320 ~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD 375 (617)
..++++.+...+.|++|.+||+.-.+....+|..+..- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 34444444446799999999999654433333333332 2234788888888886
No 77
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.54 E-value=0.0014 Score=74.65 Aligned_cols=199 Identities=16% Similarity=0.118 Sum_probs=89.5
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc------CC-CcEEEEcCccccCCCcHhHHHHHHHhhhhh
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL------SN-IDIVFHIGDITYANGYISQWDQFTAQVEPI 361 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 361 (617)
...++|+.++|+|..-... .+ .......+..++++. .+ .-+++..||+.... ..+.+..- ..+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~---~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EY---GEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--cc---CCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 01 111233344444331 12 35888899998532 22222110 011111
Q ss_pred hcCCCe-EEcccCCCCCCCCCCCccCCCCCCCccCcccc--ceeccCC--CCCCCeEEEEEeCCEE--EEEEeCCCC--C
Q 007133 362 ASTVPY-MIGSGNHERDWPNSGSFYDTTDSGGECGVPAE--TMFYVPA--ENRAKFWYSTDYGMFH--FCIADTEHD--W 432 (617)
Q Consensus 362 ~~~vP~-~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~--~~f~~P~--~~~~~~yYsfd~G~v~--fi~LDt~~~--~ 432 (617)
+..+.+ ..++||||+++... .+..... ....|+- +.. ... ...-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~~--~a~fp~l~aNv~-~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~ 179 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQEK--WAKFPFLSANIY-QKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKI 179 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhhc--cCCCCEEEEEEE-ECCCCCcccCCeEEEEECCEEEEEEEEeccccccc
Confidence 222222 45679999985321 1111000 0011110 000 000 0112346667888855 555543321 1
Q ss_pred -CCC-------HHHHHHHHHHHHhccc-CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc---CCcEE
Q 007133 433 -REG-------SEQYRFIEQCLASVDR-RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY---KVDIA 500 (617)
Q Consensus 433 -~~g-------~~Q~~WL~~~L~~~~r-~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~---~Vdlv 500 (617)
.+. .+..+-+++.+++... .+..-+|++.|..+ ..... .+ +.. . .-..|.++. +||++
T Consensus 180 ~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~-~-~d~~la~~~~~~~IDvI 249 (551)
T PRK09558 180 GNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA-P-GDVEMARSLPAGGLDMI 249 (551)
T ss_pred cCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC-c-cHHHHHHhCCccCceEE
Confidence 010 1112223333333321 46778999999876 22110 00 000 0 112344443 79999
Q ss_pred EecCcccce
Q 007133 501 FFGHVHNYE 509 (617)
Q Consensus 501 lsGH~H~Ye 509 (617)
|.||.|.+-
T Consensus 250 lgGHsH~~~ 258 (551)
T PRK09558 250 VGGHSQDPV 258 (551)
T ss_pred EeCCCCccc
Confidence 999999853
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.00049 Score=68.41 Aligned_cols=73 Identities=18% Similarity=0.154 Sum_probs=45.9
Q ss_pred EEeecCCCcCCCCcccccCCCCchhHHHHHHHh-cCCCcEEEEcCccccCCCcHhHHHHHHHh----hhhhhc-CCCeEE
Q 007133 296 IFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD-LSNIDIVFHIGDITYANGYISQWDQFTAQ----VEPIAS-TVPYMI 369 (617)
Q Consensus 296 v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~----i~~l~~-~vP~~~ 369 (617)
.++|.|.++.. |.-...+...+++ ..+.|.++++||++..---...|.++.++ +..++. .+|++.
T Consensus 2 FISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~ 72 (237)
T COG2908 2 FISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYY 72 (237)
T ss_pred eeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEE
Confidence 68999987421 2223445555554 33569999999999641111245444433 344443 699999
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||.-
T Consensus 73 i~GN~Dfl 80 (237)
T COG2908 73 IHGNHDFL 80 (237)
T ss_pred ecCchHHH
Confidence 99999964
No 79
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.30 E-value=0.0027 Score=71.76 Aligned_cols=204 Identities=13% Similarity=0.128 Sum_probs=96.9
Q ss_pred CCCCceEEEEEeecCCCcCCCCcccccCCC--CchhHHHHHHHh---cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhh
Q 007133 287 GQDSLQRVVIFGDMGKAERDGSNEYSNYQP--GSLNTTDQLIRD---LSNIDIVFHIGDITYANGYISQWDQFTAQVEPI 361 (617)
Q Consensus 287 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~~~~~l~~~---~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 361 (617)
.....++|+...|+|..-... .+..... +.+..+..++++ ..+..++|.+||++........ ..-.+.+-.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~ 98 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDL 98 (517)
T ss_pred cCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHHH
Confidence 334559999999999764310 1111011 223333333332 1345689999999965432221 0001111122
Q ss_pred hcCCCe-EEcccCCCCCCCCCCCccCCCCCCCccCccc--cceeccCC--CCCCCeEEEEEeCCEE--EEEEeCCC--CC
Q 007133 362 ASTVPY-MIGSGNHERDWPNSGSFYDTTDSGGECGVPA--ETMFYVPA--ENRAKFWYSTDYGMFH--FCIADTEH--DW 432 (617)
Q Consensus 362 ~~~vP~-~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~--~~~f~~P~--~~~~~~yYsfd~G~v~--fi~LDt~~--~~ 432 (617)
+..++| ..++||||++.... ++...-. +...|+ .+.+.-+. ...-+.|.-++.++++ +|.+.+.. .+
T Consensus 99 mN~m~yDa~tiGNHEFd~g~~--~l~~~~~--~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~ 174 (517)
T COG0737 99 LNALGYDAMTLGNHEFDYGLE--ALARLLD--EAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTW 174 (517)
T ss_pred HhhcCCcEEeecccccccCHH--HHHHHHh--ccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccc
Confidence 333444 56999999985321 0000000 000111 00111101 1113567888888854 56666422 11
Q ss_pred CC--------CHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecC
Q 007133 433 RE--------GSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGH 504 (617)
Q Consensus 433 ~~--------g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH 504 (617)
.. -.+..+++++.+.+.......-+|++.|-++ ...... ..... .. ..... .++|+++.||
T Consensus 175 ~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~~--~~--~~~~~-----~~iD~i~~GH 243 (517)
T COG0737 175 EKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEVP--GD--VDVAV-----PGIDLIIGGH 243 (517)
T ss_pred ccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-ccccc--cc--ccccc-----cCcceEeccC
Confidence 11 0234566666666654333677999999986 322111 11000 00 11111 4499999999
Q ss_pred cccc
Q 007133 505 VHNY 508 (617)
Q Consensus 505 ~H~Y 508 (617)
.|.+
T Consensus 244 ~H~~ 247 (517)
T COG0737 244 SHTV 247 (517)
T ss_pred Cccc
Confidence 9974
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.11 E-value=0.0083 Score=68.27 Aligned_cols=83 Identities=18% Similarity=0.170 Sum_probs=40.8
Q ss_pred eEEEEEeecCCCcCCC--------CcccccCCCCchhHHHHHHHhc--C-CCcEEEEcCccccCCCcHhHHHHHHHhhhh
Q 007133 292 QRVVIFGDMGKAERDG--------SNEYSNYQPGSLNTTDQLIRDL--S-NIDIVFHIGDITYANGYISQWDQFTAQVEP 360 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~--~-~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 360 (617)
++|+.+.|+|..-... ...+. ..+....+..++++. . ..-+++..||++..... ..+.+-...++
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~--~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~-~~~~~g~~~i~- 76 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKA--AIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLY-FTLFGGRADAA- 76 (550)
T ss_pred CEEEEEccccccccCcccccccCCCcccc--ccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccc-hhhcCCHHHHH-
Confidence 4788999998642110 00000 112344455555432 2 23588899999954322 11111011111
Q ss_pred hhcCCC-eEEcccCCCCCC
Q 007133 361 IASTVP-YMIGSGNHERDW 378 (617)
Q Consensus 361 l~~~vP-~~~v~GNHD~~~ 378 (617)
++..+. =+.++||||+++
T Consensus 77 ~~N~~g~Da~~lGNHEFd~ 95 (550)
T TIGR01530 77 LMNAAGFDFFTLGNHEFDA 95 (550)
T ss_pred HHhccCCCEEEeccccccC
Confidence 222222 256899999985
No 81
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.03 E-value=0.00088 Score=64.29 Aligned_cols=47 Identities=19% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCCcEEEEcCccccCCCcH--hHHHHHHHhhhhhhcCCCeEEcccCCCCC
Q 007133 330 SNIDIVFHIGDITYANGYI--SQWDQFTAQVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 377 (617)
.+||.|+++||+++..... .++... .........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGGLSRQEFEEV-AFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccccCHHHHHHH-HHHHhccCCCeEEEEcccCccc
Confidence 6899999999999753321 222221 1233334578999999999974
No 82
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.93 E-value=0.0015 Score=65.60 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=50.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCC--CchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQP--GSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 367 (617)
-+.++++|+|.+............| ....+++++.+. ..++|.|+++||+.+.......|.++.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3588999999874210000000011 112344555442 257999999999997654434455555555543 3599
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
+.++||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999963
No 83
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.92 E-value=0.0086 Score=63.19 Aligned_cols=39 Identities=21% Similarity=0.106 Sum_probs=25.1
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEEecCcccce
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAFFGHVHNYE 509 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 509 (617)
.+..-+|++.|--- +. + . ..|.++ .+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~---d---~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------I---E---QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------h---H---HHHHhcCCCCCEEEeCCCCccC
Confidence 45677899999631 11 0 1 123334 379999999999963
No 84
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.90 E-value=0.0014 Score=66.51 Aligned_cols=76 Identities=16% Similarity=0.302 Sum_probs=47.0
Q ss_pred EEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc----CCCcEEEEcCccccCCC----c---------HhHHHHHHHh
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL----SNIDIVFHIGDITYANG----Y---------ISQWDQFTAQ 357 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~pDfvl~~GDi~Y~~g----~---------~~~wd~f~~~ 357 (617)
++++|+|.+... + .......+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 678999976421 0 011112233333322 25799999999996521 0 1224455666
Q ss_pred hhhhhcCCCeEEcccCCCCC
Q 007133 358 VEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 358 i~~l~~~vP~~~v~GNHD~~ 377 (617)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 77777789999999999974
No 85
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.83 E-value=0.0024 Score=64.52 Aligned_cols=67 Identities=19% Similarity=0.280 Sum_probs=44.5
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc----C--------CCcEEEEcCccccCCCcHhHHHHHHHhhhh
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL----S--------NIDIVFHIGDITYANGYISQWDQFTAQVEP 360 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~--------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 360 (617)
|++++||+|.. ...+++++++. . +.|.++++||+++. |..+ .+.++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 68999999764 35667777653 1 26899999999964 4322 233444443
Q ss_pred hhcCCCeEEcccCCCCC
Q 007133 361 IASTVPYMIGSGNHERD 377 (617)
Q Consensus 361 l~~~vP~~~v~GNHD~~ 377 (617)
+...-.+..+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 33334678999999963
No 86
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.83 E-value=0.0025 Score=65.95 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=44.6
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+++++||+|.. ...+++++++. .+.|.++++||+++. |..+ .+.++.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 58999999754 35567777754 368999999999964 4322 2333343333 346889
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
++||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
No 87
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.82 E-value=0.0029 Score=62.64 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=42.8
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
|++++||+|.. ...++++++.. .++|.++++||+++..... .+.++.+. ..+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 68999999853 34566666653 3589999999999654332 12333332 246889
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
No 88
>PHA02239 putative protein phosphatase
Probab=96.80 E-value=0.0018 Score=65.46 Aligned_cols=67 Identities=12% Similarity=0.205 Sum_probs=41.6
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---C-CCcEEEEcCccccCCCcHhHHHHHHHhhhh-hhcCCCe
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---S-NIDIVFHIGDITYANGYISQWDQFTAQVEP-IASTVPY 367 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~-~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~-l~~~vP~ 367 (617)
|++++||+|.. ...++++++.. . ..|.++++||+++. |..+ .+..+.+.. +....++
T Consensus 2 ~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDr-G~~s--~~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYVDR-GKRS--KDVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCC-CCCh--HHHHHHHHHHhhcCCCe
Confidence 68999999853 12345554442 1 35999999999964 4332 122222222 2234678
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
++++||||..
T Consensus 64 ~~l~GNHE~~ 73 (235)
T PHA02239 64 VTLLGNHDDE 73 (235)
T ss_pred EEEECCcHHH
Confidence 9999999963
No 89
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.78 E-value=0.0015 Score=62.51 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=31.4
Q ss_pred HHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccCCCCC
Q 007133 324 QLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 324 ~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 377 (617)
.+.+...++|.|+++||++.... ...+ .+.++.+ ..|++.++||||..
T Consensus 35 ~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 35 NWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred HHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 33333457899999999996543 2222 2223322 46899999999964
No 90
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.77 E-value=0.004 Score=69.94 Aligned_cols=81 Identities=17% Similarity=0.315 Sum_probs=50.5
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHH-HHHHHh-------cCCCcEEEEcCccccCCCc-------------H
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTT-DQLIRD-------LSNIDIVFHIGDITYANGY-------------I 348 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~-~~l~~~-------~~~pDfvl~~GDi~Y~~g~-------------~ 348 (617)
...++++++|+|.+... + ....+..+ +.+... ..+++.++++||++...+. .
T Consensus 242 ~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~ 314 (504)
T PRK04036 242 EKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIY 314 (504)
T ss_pred CccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhH
Confidence 44899999999976431 0 01111222 222211 2568999999999964221 1
Q ss_pred hHHHHHHHhhhhhhcCCCeEEcccCCCCC
Q 007133 349 SQWDQFTAQVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 349 ~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 377 (617)
.+++.+.+.+..+...+|+++++||||..
T Consensus 315 ~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 315 EQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 12344555666666789999999999974
No 91
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.72 E-value=0.2 Score=50.15 Aligned_cols=198 Identities=18% Similarity=0.169 Sum_probs=106.1
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.|++++||+=... |. ....+.+.++.++ -++||+|..|-++ +.|.---|+.+.+.++. .+- +++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEec
Confidence 4899999983321 00 0011223333332 5799999999999 66654344444444432 333 3589
Q ss_pred cCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCC--CCCCC-CHHHHHHHHHHHHh
Q 007133 372 GNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTE--HDWRE-GSEQYRFIEQCLAS 448 (617)
Q Consensus 372 GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~--~~~~~-g~~Q~~WL~~~L~~ 448 (617)
|||=++.+..-.|....+ . .-.-.+.|....+.-|+-|...+..+.++|-. ..... -..-++=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999987543222211100 0 00012344444456677788777666665532 21111 12224445666666
Q ss_pred cccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCccccc
Q 007133 449 VDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYT 528 (617)
Q Consensus 449 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 528 (617)
.+ .+++.+||-+|.-- +| |. .-.-++.+-+|.+|+-=|+|.-.- +.++.
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------EK----~a~g~yldGrvsavvGTHTHV~Ta-----D~rIL-------- 187 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------EK----NAFGWYLDGRVSAVVGTHTHVPTA-----DERIL-------- 187 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------hh----hhhheEEcCeEEEEEeccCccccc-----cceec--------
Confidence 43 45678899899643 11 11 111223355799999999998432 22221
Q ss_pred CCCCceEEEE-ECCCCC
Q 007133 529 GTVNGTIHVV-VGGGGS 544 (617)
Q Consensus 529 ~~~~g~v~iv-~G~gG~ 544 (617)
++|+-|+. +|+-|.
T Consensus 188 --~~GTayiTDvGMtG~ 202 (266)
T COG1692 188 --PKGTAYITDVGMTGP 202 (266)
T ss_pred --CCCcEEEecCccccc
Confidence 36888887 677665
No 92
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.69 E-value=0.024 Score=66.86 Aligned_cols=96 Identities=19% Similarity=0.203 Sum_probs=48.2
Q ss_pred EcCCCCCCCCceEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHhc--CCC-cEEEEcCccccCCCcHhHHHH--
Q 007133 281 RASPYPGQDSLQRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRDL--SNI-DIVFHIGDITYANGYISQWDQ-- 353 (617)
Q Consensus 281 ~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~-- 353 (617)
.+.|..+....+||+...|+|..-..- ..|.. -..+.+..+..++++. +.+ -++|..||++...-... +..
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~~-dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~-~~a~~ 182 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVNY-DYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGT-YKAIV 182 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCcccc-cccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccc-hhhhc
Confidence 344555555569999999999763210 00111 0112233444444432 223 48889999996532211 100
Q ss_pred ---H---HHhhhhhhcCCCe-EEcccCCCCCC
Q 007133 354 ---F---TAQVEPIASTVPY-MIGSGNHERDW 378 (617)
Q Consensus 354 ---f---~~~i~~l~~~vP~-~~v~GNHD~~~ 378 (617)
+ ...+-.++..+.| ..++||||+++
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhccc
Confidence 0 0011122233333 56899999985
No 93
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.67 E-value=0.0036 Score=63.66 Aligned_cols=66 Identities=21% Similarity=0.230 Sum_probs=43.7
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC-----------CCcEEEEcCccccCCCcHhHHHHHHHhhhhh
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS-----------NIDIVFHIGDITYANGYISQWDQFTAQVEPI 361 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 361 (617)
|++++||+|.. ...++++++... +-|-++++||+++. |..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR-Gp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR-GPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC-CcCh--HHHHHHHHHH
Confidence 68999999753 456777776521 24789999999964 4333 1233333333
Q ss_pred hcCCCeEEcccCCCC
Q 007133 362 ASTVPYMIGSGNHER 376 (617)
Q Consensus 362 ~~~vP~~~v~GNHD~ 376 (617)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
No 94
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.59 E-value=0.06 Score=63.39 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=44.2
Q ss_pred ceEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHhc--CCC-cEEEEcCccccCCCcHhHHHHH-----------
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRDL--SNI-DIVFHIGDITYANGYISQWDQF----------- 354 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~f----------- 354 (617)
.++|+...|+|..-..- ..|.. -....+..+..++++. +.+ -++|..||++...........-
T Consensus 39 ~L~IL~TnDiHg~l~~~-dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 39 NLRILETSDIHVNLMNY-DYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred EEEEEEEeecCCCCcCc-CccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 48999999999864211 01111 0112344455555442 223 4888999999653321111000
Q ss_pred -HHhhhhhhcCCCe-EEcccCCCCCC
Q 007133 355 -TAQVEPIASTVPY-MIGSGNHERDW 378 (617)
Q Consensus 355 -~~~i~~l~~~vP~-~~v~GNHD~~~ 378 (617)
...+-.++..+-| ..++||||+++
T Consensus 118 ~~~p~i~~mN~lgyDa~tlGNHEFdy 143 (780)
T PRK09418 118 YTHPLYRLMNLMKYDVISLGNHEFNY 143 (780)
T ss_pred cchHHHHHHhccCCCEEecccccccc
Confidence 0112122333333 56899999975
No 95
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.49 E-value=0.0059 Score=61.19 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=42.9
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC----------CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS----------NIDIVFHIGDITYANGYISQWDQFTAQVEPIAS 363 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~ 363 (617)
+.++||+|.. ...++++++.+. ..|.++++||+++. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 3689999754 456777776531 35799999999954 4332 233344333333
Q ss_pred CCCeEEcccCCCCC
Q 007133 364 TVPYMIGSGNHERD 377 (617)
Q Consensus 364 ~vP~~~v~GNHD~~ 377 (617)
.-.++.+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 34688899999964
No 96
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.41 E-value=0.015 Score=53.93 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=43.6
Q ss_pred EEEEEeecCCCcCCC--CcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEc
Q 007133 293 RVVIFGDMGKAERDG--SNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIG 370 (617)
Q Consensus 293 rf~v~GD~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v 370 (617)
.+.++||+|.+...- ...+++...-....+....+....-|.+.|+||++....... .....++.+-.. ...+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~---~a~~IlerLnGr--khlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER---AAGLILERLNGR--KHLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhh---HHHHHHHHcCCc--EEEe
Confidence 467889998765321 112222111111223333333455689999999996443322 333444444333 3789
Q ss_pred ccCCCCC
Q 007133 371 SGNHERD 377 (617)
Q Consensus 371 ~GNHD~~ 377 (617)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999965
No 97
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.34 E-value=0.029 Score=69.45 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=30.0
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEEecCcccce
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAFFGHVHNYE 509 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 509 (617)
....-+|++.|..+ -.. . ...+ . .+....|.++ .+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~-~~~-~--~~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI-ESE-Y--QSSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc-CCC-C--CCCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46778999999876 211 1 0011 1 2233445544 489999999999964
No 98
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.30 E-value=0.047 Score=55.10 Aligned_cols=168 Identities=16% Similarity=0.132 Sum_probs=84.5
Q ss_pred CCCcEEEEcCccccCCCc---HhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCC
Q 007133 330 SNIDIVFHIGDITYANGY---ISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPA 406 (617)
Q Consensus 330 ~~pDfvl~~GDi~Y~~g~---~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~ 406 (617)
.++|||+..|.++ +.|. ....+++++. .+-+ ++.|||=++..+.-.+.+.. . ..-.-.++|.
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~~------GvDv-iT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~ 90 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFKA------GVDV-ITMGNHIWDKKEIFDFIDKE---P----RILRPANYPP 90 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHHH------T-SE-EE--TTTTSSTTHHHHHHH----S----SEE--TTS-T
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHhc------CCCE-EecCcccccCcHHHHHHhcC---C----CcEECCCCCC
Confidence 4799999999999 5553 2333333332 3443 48899998753321111100 0 0001123454
Q ss_pred CCCCCeEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhh
Q 007133 407 ENRAKFWYSTDYGMFHFCIADTE--HDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMG 484 (617)
Q Consensus 407 ~~~~~~yYsfd~G~v~fi~LDt~--~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~ 484 (617)
...+.-|..++.++.++.++|-. ....+...-+.-+++.|++. +.+++.+||=+|.=- + .
T Consensus 91 ~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa--T-----------S---- 152 (253)
T PF13277_consen 91 GTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA--T-----------S---- 152 (253)
T ss_dssp T-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S---H-----------H----
T ss_pred CCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc--H-----------H----
Confidence 45567789999999887777643 22222223355566666664 357788888888532 0 0
Q ss_pred HHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEE-ECCCCCC
Q 007133 485 RESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVV-VGGGGSH 545 (617)
Q Consensus 485 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv-~G~gG~~ 545 (617)
-+.-.-.+..-+|.+|+-=|+|.- ..+.++. ++||-||+ +|+-|..
T Consensus 153 EK~A~g~~lDGrvsaV~GTHTHVq-----TaDerIL----------p~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 153 EKQAMGWYLDGRVSAVVGTHTHVQ-----TADERIL----------PGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHHHHBTTBSEEEEESSSS------BS--EE-----------TTS-EEES---EBEES
T ss_pred HHHHHHHHhCCcEEEEEeCCCCcc-----Cchhhcc----------CCCCEEEecCccccCc
Confidence 123344556789999999999982 2222221 36888887 7777764
No 99
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.27 E-value=0.0085 Score=59.84 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=42.3
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC---CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS---NIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
|++++||+|.. ...+++++++.. +.|-++++||+++.+.... +-++.+. ...+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~---~vl~~l~----~~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL---RCLQLLE----EHWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH---HHHHHHH----cCCceE
Confidence 89999999764 456777777642 5789999999995433221 2233222 124678
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999953
No 100
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.18 E-value=0.012 Score=58.67 Aligned_cols=62 Identities=16% Similarity=0.253 Sum_probs=41.7
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
|++++||+|.. ...++++++.. .+.|.++++||+++.+.... +.++.+. .-.++.
T Consensus 16 ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~~ 73 (218)
T PRK09968 16 HIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFIS 73 (218)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcEE
Confidence 89999999754 34566666654 36899999999996433322 2222222 224678
Q ss_pred cccCCCC
Q 007133 370 GSGNHER 376 (617)
Q Consensus 370 v~GNHD~ 376 (617)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
No 101
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.12 E-value=0.02 Score=46.94 Aligned_cols=74 Identities=22% Similarity=0.225 Sum_probs=43.7
Q ss_pred CCccceEeecCCCCcEEEEEEeCCC--CCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYD--ISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
+|..+++... ..+++.|+|..... ..-..-.|+|....+... ...... ++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD---WQEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE---EEEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee---eeeeee-----------------eeeeeeeee
Confidence 4566666443 57999999998741 111223566654433220 001111 112236788
Q ss_pred cCCCCCcEEEEEEeeec
Q 007133 251 KNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~ 267 (617)
++|+|+++|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998764
No 102
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.00 E-value=0.013 Score=59.89 Aligned_cols=63 Identities=19% Similarity=0.268 Sum_probs=42.2
Q ss_pred EEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.++||+|.. ...++++++++ .+.|.++++||+++. |..+ .+.++.+..+. ..+..++
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVdR-Gp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVNR-GPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCCC-CcCH--HHHHHHHHhcC--CCeEEEc
Confidence 589999754 35677777653 257999999999954 4333 23344433332 3678999
Q ss_pred cCCCCC
Q 007133 372 GNHERD 377 (617)
Q Consensus 372 GNHD~~ 377 (617)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
No 103
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.98 E-value=0.13 Score=52.63 Aligned_cols=108 Identities=11% Similarity=0.130 Sum_probs=61.8
Q ss_pred CCcEEEEcCccccCCCc-------------------HhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCC
Q 007133 331 NIDIVFHIGDITYANGY-------------------ISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSG 391 (617)
Q Consensus 331 ~pDfvl~~GDi~Y~~g~-------------------~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ 391 (617)
++.-+|++||.+...+. ..+.+++.+.+..+.+.+|+.+.|||||-.... .-+ ..-
T Consensus 42 ~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~---lPQ--qpl 116 (257)
T cd07387 42 SIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS---LPQ--QPL 116 (257)
T ss_pred ceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc---CCC--CCC
Confidence 45579999999974321 223455566677778899999999999964211 000 000
Q ss_pred CccCcccc---ceeccCCCCCCCeEEEEEeCCEEEEEEeCCCC-----CCCCHHHHHHHHHHHHh
Q 007133 392 GECGVPAE---TMFYVPAENRAKFWYSTDYGMFHFCIADTEHD-----WREGSEQYRFIEQCLAS 448 (617)
Q Consensus 392 ge~g~~~~---~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~-----~~~g~~Q~~WL~~~L~~ 448 (617)
..|-.+-. ..+.. ..|. |.|++++++|++.+...- +.+.+.-.+.|+..|+-
T Consensus 117 h~~lfp~s~~~~~~~~----vtNP-~~~~i~g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 117 HRCLFPKSSNYSTLNL----VTNP-YEFSIDGVRVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred CHHHhhcccccCCcEE----eCCC-eEEEECCEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 00000000 00111 1233 569999999998887641 23344556778887764
No 104
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.97 E-value=0.021 Score=59.15 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=40.2
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--------CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc-
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--------SNIDIVFHIGDITYANGYISQWDQFTAQVEPIAS- 363 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~- 363 (617)
+++++||.|.. ...++++++.+ ...+.++++||+++...... +.++.+..+..
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~---eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR---KVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH---HHHHHHHHhhhc
Confidence 68999999764 34455554421 13568999999996543322 22333222222
Q ss_pred --CCCeEEcccCCCCC
Q 007133 364 --TVPYMIGSGNHERD 377 (617)
Q Consensus 364 --~vP~~~v~GNHD~~ 377 (617)
...++++.||||..
T Consensus 65 ~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 65 HPKQRHVFLCGNHDFA 80 (304)
T ss_pred ccccceEEEecCChHH
Confidence 22478899999953
No 105
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=95.64 E-value=0.014 Score=59.13 Aligned_cols=176 Identities=25% Similarity=0.325 Sum_probs=95.8
Q ss_pred CcEEEEcCccccCCCcH-------hHHHHHHHh----hhhhhcCCCeEEcccCCCCCCCCC---CCccCCC-----CCCC
Q 007133 332 IDIVFHIGDITYANGYI-------SQWDQFTAQ----VEPIASTVPYMIGSGNHERDWPNS---GSFYDTT-----DSGG 392 (617)
Q Consensus 332 pDfvl~~GDi~Y~~g~~-------~~wd~f~~~----i~~l~~~vP~~~v~GNHD~~~~~~---g~~y~~~-----ds~g 392 (617)
|==++..||++.+.|-. .++.+|-.. ..++...+|+|+-.||||.+-... -.+|+.. ....
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 33466778999765421 122222111 233445799999999999873221 1122100 0000
Q ss_pred ccCccccceeccCCC--CCCCeEEEEEeCCEEEEEEeCCCCC-CCC-HHHHHHHHHHHHhcccCCCCEEEEEecccC-cc
Q 007133 393 ECGVPAETMFYVPAE--NRAKFWYSTDYGMFHFCIADTEHDW-REG-SEQYRFIEQCLASVDRRKQPWLIFAAHRVL-GY 467 (617)
Q Consensus 393 e~g~~~~~~f~~P~~--~~~~~yYsfd~G~v~fi~LDt~~~~-~~g-~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~-~y 467 (617)
..++.++. +.|.. +..+--||+++|.+|.+-+-+...- .++ ..-.-||+.+|........| ++++.|.-. .+
T Consensus 207 r~~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtf 283 (392)
T COG5555 207 RSDVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTF 283 (392)
T ss_pred CcCcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccce
Confidence 00111110 11211 1234458999999988776543211 111 22356999999875545566 788888632 23
Q ss_pred CCCCCCCC------CCC-----ccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 468 SSDYWYGQ------EGS-----FEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 468 ss~~~~~~------~g~-----~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
++..|.+. .|. ...+. |..|...++-|+|.-.+.||.|...-.
T Consensus 284 steawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~ma 337 (392)
T COG5555 284 STEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFNMA 337 (392)
T ss_pred eccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEecccccccccee
Confidence 44333221 111 11233 788999999999999999999997433
No 106
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.63 E-value=0.14 Score=59.37 Aligned_cols=87 Identities=20% Similarity=0.216 Sum_probs=43.8
Q ss_pred CceEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHhc--CC-CcEEEEcCccccCCCcHhHHHHHH-------Hh
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRDL--SN-IDIVFHIGDITYANGYISQWDQFT-------AQ 357 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~-------~~ 357 (617)
..++|+...|+|..-..- ..|.+ -....+..+..++++. +. --+++..||++..... ..|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDF-DYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCC-ccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcch
Confidence 359999999999763211 00110 0112234444555432 22 3478889999964332 2221110 01
Q ss_pred hhhhhcCCCe-EEcccCCCCCC
Q 007133 358 VEPIASTVPY-MIGSGNHERDW 378 (617)
Q Consensus 358 i~~l~~~vP~-~~v~GNHD~~~ 378 (617)
+-..+..+.| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 56899999975
No 107
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.56 E-value=0.027 Score=56.03 Aligned_cols=65 Identities=18% Similarity=0.229 Sum_probs=41.2
Q ss_pred EEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc-CCCeEEcc
Q 007133 295 VIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIAS-TVPYMIGS 371 (617)
Q Consensus 295 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~-~vP~~~v~ 371 (617)
.++||+|.. ...+.++++.. ...|.++++||+++.. ... .+.+..+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdrg-~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDRG-PDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCCC-CCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 34566666653 3689999999999643 222 122222222211 45789999
Q ss_pred cCCCCC
Q 007133 372 GNHERD 377 (617)
Q Consensus 372 GNHD~~ 377 (617)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999975
No 108
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=95.48 E-value=0.14 Score=59.21 Aligned_cols=85 Identities=20% Similarity=0.250 Sum_probs=42.9
Q ss_pred eEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHhc--C-CCcEEEEcCccccCCCcHhHHHHHH-------Hhhh
Q 007133 292 QRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRDL--S-NIDIVFHIGDITYANGYISQWDQFT-------AQVE 359 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~-~pDfvl~~GDi~Y~~g~~~~wd~f~-------~~i~ 359 (617)
++|+...|+|..-..- ..|.+ -....+..+..++++. + .--+++..||++..... ..|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMDY-DYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccCC-cccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 7999999999763210 00110 0112234444554432 1 23488889999965432 1121110 0111
Q ss_pred hhhcCCCe-EEcccCCCCCC
Q 007133 360 PIASTVPY-MIGSGNHERDW 378 (617)
Q Consensus 360 ~l~~~vP~-~~v~GNHD~~~ 378 (617)
.++..+.| ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 12233333 56899999975
No 109
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=95.25 E-value=0.32 Score=49.06 Aligned_cols=61 Identities=21% Similarity=0.218 Sum_probs=38.2
Q ss_pred HHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 440 RFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 440 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
+-+++.+++.. ++...+||..|-..-|.. . .... ...+...+.+.++|+++.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY------Y---PTPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC------C---CCHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 34555555543 247889999996541111 0 0122 345565666789999999999997643
No 110
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.11 E-value=0.043 Score=56.62 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=41.7
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC---CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS---NIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+..++||+|.. ...++++++++. ..|-++++||+++.+.... +.++.+..+ .-.+..
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l--~~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSL--GDAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhc--CCCeEE
Confidence 46899999764 356777777642 5789999999996543322 222333322 123568
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999963
No 111
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=94.90 E-value=0.52 Score=56.51 Aligned_cols=134 Identities=18% Similarity=0.190 Sum_probs=74.0
Q ss_pred ceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEEcCcccc----cCCCCCcc-ceEeecCCCCcEEEEEEeCCCCCCCCC
Q 007133 131 KATLNFRLINQRS--DFSFGLFSGGLSNPKLVAVSNSITF----ANPKAPLY-PRLAQGKSWDEMTVTWTSGYDISEAAP 203 (617)
Q Consensus 131 ~~~~~~~l~n~r~--~~~f~~~~~~~~~~~~~a~s~~~~~----~~~~~P~~-~~La~~~~~~~m~V~W~T~~~~~~~~~ 203 (617)
......+|-+++. +|.|++..-+..-+ --.|..|++ .-|.+|-+ +.| ...++++++|.|......+....
T Consensus 571 ~n~~e~ti~gL~k~TeY~~~vvA~N~~G~--g~sS~~i~V~Tlsd~PsaPP~Nl~l-ev~sStsVrVsW~pP~~~t~ng~ 647 (1381)
T KOG4221|consen 571 NNATEYTINGLEKYTEYSIRVVAYNSAGS--GVSSADITVRTLSDVPSAPPQNLSL-EVVSSTSVRVSWLPPPSETQNGQ 647 (1381)
T ss_pred cCccEEEeecCCCccceEEEEEEecCCCC--CCCCCceEEEeccCCCCCCCcceEE-EecCCCeEEEEccCCCcccccce
Confidence 4455566666665 68887776432210 000122222 13555555 666 34458999999998765443334
Q ss_pred EEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 204 FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 204 ~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
..-|...............++. .|....-.+.+|+|+|.|.+||.....+|+...|++..|.|+
T Consensus 648 itgYkIRy~~~~~~~~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 648 ITGYKIRYRKLSREDEVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred EEEEEEEecccCcccccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 4444332111000001111111 111112246789999999999987777777777888888886
No 112
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.64 E-value=0.18 Score=52.86 Aligned_cols=179 Identities=21% Similarity=0.365 Sum_probs=95.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh-cCCCcEEEEcCccccCCCc--------HhHHH---HHHHhhh
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD-LSNIDIVFHIGDITYANGY--------ISQWD---QFTAQVE 359 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~pDfvl~~GDi~Y~~g~--------~~~wd---~f~~~i~ 359 (617)
.|++|-|++|..-. ....++..+-+. ..++|++|..||+---+.. ...|. .|++.+.
T Consensus 1 MrIaVqGCcHG~Ld-----------~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELD-----------NIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHH-----------HHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 37889999875311 011233333221 2479999999998742211 12232 3444432
Q ss_pred -hhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEE-----EEEeCCEEEEEEeCC---C
Q 007133 360 -PIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWY-----STDYGMFHFCIADTE---H 430 (617)
Q Consensus 360 -~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yY-----sfd~G~v~fi~LDt~---~ 430 (617)
.+.+.+|-+++=||||.. .+......|| |- -.+.|| ...+|+||+-.|+.- +
T Consensus 70 ge~~APVlTIFIGGNHEAs-----nyL~eLpyGG---------wV-----ApNIyYlG~agVv~~~gvRIggiSGI~k~~ 130 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEAS-----NYLQELPYGG---------WV-----APNIYYLGYAGVVNFGGVRIGGISGIYKEH 130 (456)
T ss_pred CcccCceeEEEecCchHHH-----HHHHhcccCc---------ee-----ccceEEeeecceEEECCEEEeeccchhhhh
Confidence 345678899999999964 1111111111 00 123344 356889999888753 3
Q ss_pred CCCCC-----------------HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCC------Cc-c-----c
Q 007133 431 DWREG-----------------SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEG------SF-E-----E 481 (617)
Q Consensus 431 ~~~~g-----------------~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g------~~-~-----~ 481 (617)
++..| -.+.+ ...|.+. +.|-=|++.|.=+ -+- ..||+.. .| . .
T Consensus 131 dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP-~GI-~~yGd~~~LLr~KPFFrqeie~~ 203 (456)
T KOG2863|consen 131 DYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWP-RGI-YYYGDKKQLLRLKPFFRQEIEEG 203 (456)
T ss_pred hcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCC-cch-hhcCCHHHHHhcCcHHHHHHhcC
Confidence 43321 01111 1223332 3455688888733 111 1122111 00 0 1
Q ss_pred hhhHHHHHHHHHHcCCcEEEecCccc
Q 007133 482 PMGRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 482 ~~~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
.++...++.||++-+...+|+.|.|.
T Consensus 204 ~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 204 KLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred CcCChHHHHHHHHhCcchhhhhhHhh
Confidence 23456888999999999999999997
No 113
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=94.51 E-value=0.078 Score=56.01 Aligned_cols=67 Identities=19% Similarity=0.147 Sum_probs=41.3
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCC---CcEEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCe
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSN---IDIVFHIGDITYANGYISQWDQFTAQVEPIA--STVPY 367 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 367 (617)
+++++||+|.. ...+.++++...- -+-.+++||+++. |..+ -+-+..+-.+. ..--+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVDR-G~~s--~Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVDR-GKRS--IEILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccCC-CCCc--HHHHHHHHHHhhcCCCcE
Confidence 58999999753 4567777765322 2679999999954 4322 11222222221 12347
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
+.++||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
No 114
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=94.32 E-value=0.5 Score=54.58 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=53.4
Q ss_pred CCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEE
Q 007133 183 KSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYT 260 (617)
Q Consensus 183 ~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~ 260 (617)
...+++++.|.-++..+. -.-.|+|-++..... +|..- ..-..+|+++||+|||.|-
T Consensus 454 ~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~-------~~~~~--------------~t~~~~~ti~gL~p~t~Yv 512 (996)
T KOG0196|consen 454 RTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDER-------SYSTL--------------KTKTTTATITGLKPGTVYV 512 (996)
T ss_pred eccCceEEecCCCCCCCCcceeEEEEEeecccccc-------ceeEE--------------ecccceEEeeccCCCcEEE
Confidence 358999999987654111 122455555532111 11100 0124578999999999999
Q ss_pred EEEeeecCCCCccceeeEEEEcCCC
Q 007133 261 YRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 261 Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+||......|-..+|....|.|.|.
T Consensus 513 fqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 513 FQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEEEEecccCCCCCCCceeeeecCc
Confidence 9999876566667899999999885
No 115
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.13 E-value=0.09 Score=52.70 Aligned_cols=83 Identities=20% Similarity=0.333 Sum_probs=47.9
Q ss_pred eEEEEEeecCCCcCC-----CCcccccCCCC-chhHHHHHHHhcCCCcEEEEcCccccCCCc--HhHHHHHHHhhhhhhc
Q 007133 292 QRVVIFGDMGKAERD-----GSNEYSNYQPG-SLNTTDQLIRDLSNIDIVFHIGDITYANGY--ISQWDQFTAQVEPIAS 363 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~-----~~~~~~~~~~~-~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~ 363 (617)
-+.++++|.|.+-.. |-+ .-.+|.. ....+.++++. .+|+-++.+||+-.+-+. ..+|+.....++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~-lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGIN-LPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcc-cCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 368999999986321 100 0011111 12233444443 689999999999976554 3344433333333222
Q ss_pred CCCeEEcccCCCCC
Q 007133 364 TVPYMIGSGNHERD 377 (617)
Q Consensus 364 ~vP~~~v~GNHD~~ 377 (617)
+ -++++.||||-+
T Consensus 98 ~-evi~i~GNHD~~ 110 (235)
T COG1407 98 R-EVIIIRGNHDNG 110 (235)
T ss_pred C-cEEEEeccCCCc
Confidence 2 599999999975
No 116
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=93.27 E-value=4.5 Score=48.71 Aligned_cols=192 Identities=15% Similarity=0.095 Sum_probs=107.8
Q ss_pred eccccccCCCcccEEEEEEeCCC-----CCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccCCceeeeccccCccccc
Q 007133 54 HPVLLGLKGEDTQWVTVSLVSPH-----PSADDWLGVFSPAKFNSSSCPPVNDPKEQAPYICSAPIKYKYANESNSDYTK 128 (617)
Q Consensus 54 ~~~~~~~~~~~~~~v~~~~~~~~-----~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 128 (617)
.|.=|.-.|.....++|+|.... -..-.++=.|.|..... .+ ..-=+....==+|.|.+.+-.+|
T Consensus 719 ~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~------~W--~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 719 NPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK------EW--KEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred CCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc------cc--ceeEecccCCceEEEcCCCCCCc--
Confidence 45545545666788999999853 34556667788866431 11 10000000013577777553233
Q ss_pred ccceEEEEEEeecccceEEEEEeCCCCCcEEEEEcCcccccCCCCCccceEeecCCCCcEEEEEEeCCC--CCCCCCEEE
Q 007133 129 TGKATLNFRLINQRSDFSFGLFSGGLSNPKLVAVSNSITFANPKAPLYPRLAQGKSWDEMTVTWTSGYD--ISEAAPFVE 206 (617)
Q Consensus 129 ~g~~~~~~~l~n~r~~~~f~~~~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~ 206 (617)
=.-.++++.+|.+-+= ...++.+..|..= .-+.+|..+.+ ...+.++|.|.|....- .....-.|+
T Consensus 789 -tpyevKVqa~N~~GeG--------p~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEG--------PESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCC--------CCCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEE
Confidence 2457888899888632 2234455666331 12456766665 56678999999944321 122345788
Q ss_pred EeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 207 WGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 207 yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
|....+.. . ...... -.+-.-.+.|+||+|+|.|++.|..-..-|...-|...+-+|.+.|
T Consensus 857 Y~~~~~~~-~-~~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKE-G-SLSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCc-c-ccccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 87654432 1 111111 0134456789999999999999987644443333444444555444
No 117
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.22 E-value=0.21 Score=52.56 Aligned_cols=67 Identities=19% Similarity=0.213 Sum_probs=41.1
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC--CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc--CCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS--NIDIVFHIGDITYANGYISQWDQFTAQVEPIAS--TVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~--~vP~~ 368 (617)
+++++||+|.. ...+.++++... ..+-++++||+++. |..+ -+-+..+..+.- .--++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVDR-G~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVDR-GYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccCC-CCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999753 344566666433 34789999999954 4322 122222222222 23478
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.++||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
No 118
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=92.81 E-value=0.89 Score=36.50 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=24.7
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEE
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSF 280 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F 280 (617)
-...+.+.+|.|+++|.++|.....++...|+....|
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 3466788999999999999976543333344443333
No 119
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=92.25 E-value=0.3 Score=52.68 Aligned_cols=67 Identities=21% Similarity=0.185 Sum_probs=41.2
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC--CC-cEEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCe
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS--NI-DIVFHIGDITYANGYISQWDQFTAQVEPIA--STVPY 367 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 367 (617)
++.++||+|.. ...+.++++... .. +.++++||+++. |..+ -+.+..+..+. ..--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyVDR-Gp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYVDR-GAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEeccccCC-CCCh--HHHHHHHHHHhhccCCeE
Confidence 58999999754 356677776532 22 358999999954 4322 12222222221 23347
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
+.++||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
No 120
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=92.12 E-value=0.43 Score=49.34 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=41.3
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhh--hcCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPI--ASTVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 368 (617)
+++++||+|.. ...+.++++.. ...+-++++||+++. |..+ -+.+..+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VDr-G~~s--~e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVDR-GPFS--IEVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccCC-CCCh--HHHHHHHHHHHhcCCCCEE
Confidence 58999999753 34566666542 346789999999954 4322 1222222221 1233578
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.++||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999975
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=91.82 E-value=0.37 Score=50.18 Aligned_cols=67 Identities=21% Similarity=0.203 Sum_probs=40.8
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIA--STVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 368 (617)
.+.++||+|.. ...+.++++.. ...+-++++||+++. |..+. +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyVDR-G~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYVDR-GYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEECCC-CcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38899999753 34456666542 235678999999954 43321 2222222221 234589
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.++||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
No 122
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.04 E-value=0.54 Score=49.59 Aligned_cols=23 Identities=13% Similarity=0.401 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHcCCcEEEecCc
Q 007133 483 MGRESLQRLWQKYKVDIAFFGHV 505 (617)
Q Consensus 483 ~~r~~l~~Ll~k~~VdlvlsGH~ 505 (617)
.+.+++...+++++.++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 34788999999999999999997
No 123
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=90.98 E-value=0.6 Score=51.21 Aligned_cols=82 Identities=18% Similarity=0.325 Sum_probs=50.8
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh---cCCCcEEEEcCccccCCC-c------------HhHHHH
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD---LSNIDIVFHIGDITYANG-Y------------ISQWDQ 353 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~pDfvl~~GDi~Y~~g-~------------~~~wd~ 353 (617)
..+++++++|.|.+.. +|-. ......++++.-. ..+...++.+||+++.-| + ..|+++
T Consensus 224 e~v~v~~isDih~GSk----~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred cceEEEEEeeeecccH----HHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 4588999999998642 2210 0011222222111 124579999999997422 1 235666
Q ss_pred HHHhhhhhhcCCCeEEcccCCCCC
Q 007133 354 FTAQVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 354 f~~~i~~l~~~vP~~~v~GNHD~~ 377 (617)
+.+.+..+-..+-+++.|||||.-
T Consensus 298 ~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 298 LAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHhhCCCCceEEEecCCCCcc
Confidence 666666666788899999999975
No 124
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=90.90 E-value=0.48 Score=49.53 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHcCCcEEEecCccc
Q 007133 484 GRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 484 ~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
+.+.++..+++++.++++=||.-.
T Consensus 221 g~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 221 GKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred CHHHHHHHHHHcCCeEEEECCccc
Confidence 478999999999999999999854
No 125
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=90.47 E-value=0.65 Score=48.78 Aligned_cols=66 Identities=21% Similarity=0.234 Sum_probs=40.0
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC--CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcC--CCeEE
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS--NIDIVFHIGDITYANGYISQWDQFTAQVEPIAST--VPYMI 369 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~--vP~~~ 369 (617)
+.++||+|.. ...+.++++... ..+-++++||+++. |.... +.+..+..+.-. --++.
T Consensus 45 i~vvGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyVDR-G~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ---------------FYDLQALFKEGGDIPNANYIFIGDFVDR-GYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEeeeEcCC-CCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 8899999753 345666666432 34678999999954 43321 222222222112 24789
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
No 126
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=90.46 E-value=0.62 Score=49.24 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHcCCcEEEecCccc
Q 007133 484 GRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 484 ~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
+.+.+...+++++.++++=||.-.
T Consensus 232 g~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 232 GPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred CHHHHHHHHHHcCCcEEEECCccc
Confidence 578899999999999999999854
No 127
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.46 E-value=2.9 Score=38.79 Aligned_cols=86 Identities=26% Similarity=0.275 Sum_probs=52.0
Q ss_pred HHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcc
Q 007133 485 RESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDW 564 (617)
Q Consensus 485 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~ 564 (617)
.+.|.-|-++.+||+.++||+|.++-.. .+|-.||--|++-..... +.......
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn~--------~~t~~~~P 149 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFNV--------SDTDIIVP 149 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCcc--------cccCCCCC
Confidence 3467777788999999999999988653 245667766666332111 11111456
Q ss_pred eEEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007133 565 GFVKLTAFNHSSLLFEYKKSCDGKV-YDSFTISR 597 (617)
Q Consensus 565 Gy~~l~v~~~~~L~~~~~~~~dG~v-~D~f~i~k 597 (617)
.|+.+++ ....+..-.++--||+| +|..+..|
T Consensus 150 SFvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 150 SFVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ceEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 7888888 44444333334456764 56555544
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=89.44 E-value=0.69 Score=48.40 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHcCCcEEEecCccc
Q 007133 484 GRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 484 ~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
+.+.++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 478899999999999999999854
No 129
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=89.04 E-value=0.95 Score=47.86 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHcCCcEEEecCccc
Q 007133 483 MGRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 483 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
.+.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999855
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=88.93 E-value=1.3 Score=49.10 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=35.8
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCC
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANG 346 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g 346 (617)
.+||++..|.|.+-..... .....+..++++++.- .++.|+||..||++..+.
T Consensus 13 tirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 4899999999986431110 0112355677766542 368999999999998764
No 131
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=87.68 E-value=3.9 Score=45.98 Aligned_cols=99 Identities=22% Similarity=0.413 Sum_probs=63.3
Q ss_pred EEEEEeC-C--CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccCCceeeeccccCcccccccc---eEEEEE---E
Q 007133 68 VTVSLVS-P--HPSADDWLGVFSPAKFNSSSCPPVNDPKEQAPYICSAPIKYKYANESNSDYTKTGK---ATLNFR---L 138 (617)
Q Consensus 68 v~~~~~~-~--~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l 138 (617)
|+..|+- + .|+..||||||=-.-.+ ..-...|.|+... .++ ..|+ ..+.|. |
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s-----------------~rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyL 82 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSS-----------------TRDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYL 82 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCc-----------------hhheeeEEeeccC-ccc-cCCCccceEEEECcccC
Confidence 7888875 2 89999999999543211 1134678888632 244 3343 467785 5
Q ss_pred eec-ccceEEEEEeCCCCCcEEEEEcCcccccCCCCCccceEeecC--CCCcEE
Q 007133 139 INQ-RSDFSFGLFSGGLSNPKLVAVSNSITFANPKAPLYPRLAQGK--SWDEMT 189 (617)
Q Consensus 139 ~n~-r~~~~f~~~~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~--~~~~m~ 189 (617)
.+. =..|.|++....- .+.+.|.++.|..|+ |.-.-++... +...|-
T Consensus 83 Pk~~~e~YqfcYv~~~g---~V~G~S~pFqf~~~~-p~eeLvtle~e~~~~DmL 132 (546)
T PF07888_consen 83 PKDDDEFYQFCYVDQKG---EVRGASTPFQFRAPK-PLEELVTLEDEDGNSDML 132 (546)
T ss_pred CCCCCCeEEEEEECCCc---cEEEecCCcccCCCC-ccccceeecccCCCcceE
Confidence 553 3468888776532 488999999998765 6666666655 234553
No 132
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=86.03 E-value=5.4 Score=44.95 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHH-HHHHHHHHc-CCcE-EEecCcccc
Q 007133 436 SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRE-SLQRLWQKY-KVDI-AFFGHVHNY 508 (617)
Q Consensus 436 ~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~-~l~~Ll~k~-~Vdl-vlsGH~H~Y 508 (617)
-.|.+|-.+.++. .+..-+|+++|.|. ..+ .. ++ .+..+...+ ++++ ||-||.|..
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~~-----------~e-~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RDD-----------DE-WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--ccc-----------hh-hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 3567887777766 56677899999996 211 11 22 333333333 6788 999999983
No 133
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=86.01 E-value=2.4 Score=43.12 Aligned_cols=64 Identities=19% Similarity=0.227 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeec
Q 007133 438 QYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTC 512 (617)
Q Consensus 438 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 512 (617)
+.+.+++++++++ ++..++||..|--.-|.. ...+. +..+...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888875 578899999996431211 11222 4566666667899999999999977553
No 134
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=84.66 E-value=7.4 Score=29.82 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCcEEEEEEeee
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHL 266 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~ 266 (617)
.+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999754
No 135
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=81.94 E-value=2.1 Score=42.01 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=42.4
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHh---------HH-HHH----HH
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYIS---------QW-DQF----TA 356 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~---------~w-d~f----~~ 356 (617)
|++++|.+.... ....+.+.++++.. .+|+.+|++|+++....... .. ..+ .+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888877632 11245566666532 46999999999997533211 11 112 23
Q ss_pred hhhhhhcCCCeEEcccCCCCC
Q 007133 357 QVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 357 ~i~~l~~~vP~~~v~GNHD~~ 377 (617)
.++.+...++++.+||+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 344556689999999999975
No 136
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=81.50 E-value=3.8 Score=41.36 Aligned_cols=59 Identities=19% Similarity=0.170 Sum_probs=36.6
Q ss_pred HHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 442 IEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 442 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
+++.++++. .+...+||+.|--.-|.. . ..+. ...+..-+.+.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY------E---PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC------C---CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444444443 357889999997642211 0 0111 334555555679999999999997744
No 137
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=75.53 E-value=6.7 Score=40.19 Aligned_cols=64 Identities=27% Similarity=0.457 Sum_probs=42.3
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe---
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY--- 367 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~--- 367 (617)
-.||+.++|.|.-..+ + ++...-|+++|+||... .|...+-..|-+.+ .+.|+
T Consensus 61 ~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT~-~g~~~ev~~fn~~~----gslph~yK 116 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFTN-LGLPEEVIKFNEWL----GSLPHEYK 116 (305)
T ss_pred ceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCcc-ccCHHHHHhhhHHh----ccCcceee
Confidence 3799999999865321 1 13467799999999994 45443334444433 33443
Q ss_pred EEcccCCCCCC
Q 007133 368 MIGSGNHERDW 378 (617)
Q Consensus 368 ~~v~GNHD~~~ 378 (617)
+++.||||...
T Consensus 117 IVIaGNHELtF 127 (305)
T KOG3947|consen 117 IVIAGNHELTF 127 (305)
T ss_pred EEEeeccceee
Confidence 78999999864
No 138
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=74.77 E-value=63 Score=39.81 Aligned_cols=128 Identities=18% Similarity=0.145 Sum_probs=71.3
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEEcCcccc-cCCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEE
Q 007133 129 TGKATLNFRLINQRS--DFSFGLFSGGLSNPKLVAVSNSITF-ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFV 205 (617)
Q Consensus 129 ~g~~~~~~~l~n~r~--~~~f~~~~~~~~~~~~~a~s~~~~~-~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V 205 (617)
++.| +.+.+.|.-- .|.|+.-+-+-.- --..|.++.. +.|..|.+ .=+.+..+.++.|+|..+.- ...+..
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g--~g~sS~pLkV~t~pEgp~~-~~a~ats~~ti~v~WepP~~--~n~~I~ 552 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAG--SGESSAPLKVTTQPEGPVQ-LQAYATSPTTILVTWEPPPF--GNGPIT 552 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCccc--CCccCCceEEecCCCCCcc-ccccccCcceEEEEecCCCC--CCCCce
Confidence 3445 6666665443 4666665532210 0011222222 23445666 33345568999999998752 123444
Q ss_pred EEecc--CCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 206 EWGLK--GDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 206 ~yg~~--~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
.|..- .+. ......++ .--++.+|.||+|.|.|.|||......|...-|...+|+|.
T Consensus 553 ~yk~~ys~~~----~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tl 611 (1381)
T KOG4221|consen 553 GYKLFYSEDD----TGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTL 611 (1381)
T ss_pred EEEEEEEcCC----CCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEec
Confidence 44321 000 00111111 13466788999999999999998877777666778888875
No 139
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=73.78 E-value=74 Score=33.39 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=16.6
Q ss_pred EEecCCCCCcEEEEEEeee
Q 007133 248 SFLKNLWPNTVYTYRIGHL 266 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~ 266 (617)
.+|.||+||+.|-..|...
T Consensus 262 etI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eecccCCCCcEEEEEEEEe
Confidence 3799999999999998765
No 140
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=69.69 E-value=16 Score=38.00 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=47.9
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC-------CCcEEEEcCccccCC-----CcHhHHHHHHHhh
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS-------NIDIVFHIGDITYAN-----GYISQWDQFTAQV 358 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~pDfvl~~GDi~Y~~-----g~~~~wd~f~~~i 358 (617)
..+|+++||.+... +..++.++++.+... .|-.++++|+.+... .....+.+.++.+
T Consensus 27 ~~~~VilSDV~LD~-----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~L 95 (291)
T PTZ00235 27 RHNWIIMHDVYLDS-----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKL 95 (291)
T ss_pred ceEEEEEEeeccCC-----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHH
Confidence 37899999998864 223455555555432 288999999988642 1122333333333
Q ss_pred h--------hhhcCCCeEEcccCCCC
Q 007133 359 E--------PIASTVPYMIGSGNHER 376 (617)
Q Consensus 359 ~--------~l~~~vP~~~v~GNHD~ 376 (617)
. .+.++.-++.+||-.|-
T Consensus 96 a~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 96 SVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHHHHhChHHHhcCeEEEECCCCCC
Confidence 2 34567789999999996
No 141
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=47.93 E-value=1.6e+02 Score=36.04 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=73.3
Q ss_pred eEEEEEEeecccc--eEEEEEeCCCCCcEEEEEcCcccccCCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEec
Q 007133 132 ATLNFRLINQRSD--FSFGLFSGGLSNPKLVAVSNSITFANPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGL 209 (617)
Q Consensus 132 ~~~~~~l~n~r~~--~~f~~~~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~ 209 (617)
|-|+++=+.++.. |.++.=.. +.. +-+.++.+.-.-|.+|.++++ -+-..+.++|.|.-+.+. -.|...|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~-~Ds--~s~~A~l~V~gpPgpP~~v~~-~~i~~t~~~lsW~~g~dn--~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTA-LDS--ASARADLLVRGPPGPPPDVHV-DDISDTTARLSWSPGSDN--NSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEe-ecc--hhcccceEEecCCCCCCceeE-eeeccceEEEEeecCCCC--CCCceEEeE
Confidence 4466666666653 33332221 111 222233333345677877777 333478999999887652 356777765
Q ss_pred cCC----CcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCccce-eeEEEEcCC
Q 007133 210 KGD----LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWS-KIYSFRASP 284 (617)
Q Consensus 210 ~~~----~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S-~~~~F~T~p 284 (617)
... ..|..++ + .|.+ +.|- +.+++.+|.|-..|.+||..-..-|...=| +.-..+|.+
T Consensus 651 q~rt~~~~~W~~v~-~----------vp~~-----~~~~-~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~e 713 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-T----------VPGN-----ITGD-ESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPE 713 (1051)
T ss_pred EecCCCCCcceEee-E----------CCCc-----ccCc-cceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCC
Confidence 432 2232222 1 1221 2344 679999999999999999865332322223 334567776
Q ss_pred CCC
Q 007133 285 YPG 287 (617)
Q Consensus 285 ~~g 287 (617)
+..
T Consensus 714 a~P 716 (1051)
T KOG3513|consen 714 AAP 716 (1051)
T ss_pred CCC
Confidence 543
No 142
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.69 E-value=26 Score=38.49 Aligned_cols=70 Identities=9% Similarity=0.243 Sum_probs=46.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.||++.||.-..- ....+.++++-+.....|+++.+|++.-.+....+|..+.+-...+ .+|.|+.-
T Consensus 6 ~kILv~Gd~~Gr~-----------~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY~~g 72 (528)
T KOG2476|consen 6 AKILVCGDVEGRF-----------DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTYFLG 72 (528)
T ss_pred ceEEEEcCccccH-----------HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEEEec
Confidence 5899999984321 1123444555555566999999999996555566666666554433 67777776
Q ss_pred cCC
Q 007133 372 GNH 374 (617)
Q Consensus 372 GNH 374 (617)
+|-
T Consensus 73 ~~~ 75 (528)
T KOG2476|consen 73 DNA 75 (528)
T ss_pred CCC
Confidence 665
No 143
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=47.48 E-value=46 Score=33.75 Aligned_cols=67 Identities=22% Similarity=0.291 Sum_probs=37.9
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCC--CcEEEEcCccccCCCcHhHHHHHHHhh-hhhhcCCCeEEc
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSN--IDIVFHIGDITYANGYISQWDQFTAQV-EPIASTVPYMIG 370 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--pDfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP~~~v 370 (617)
+.+.||+|.. ..-+..|.+--.. -.=-+++||.+ ++|+.+. +.|+=.+ -++.-.-.+..+
T Consensus 45 vtvcGDIHGQ---------------f~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQ---------------FYDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccch---------------HHHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHHHHHhhcCcceeEEe
Confidence 6789999753 2334555553211 12467899999 4565442 3333221 112223446789
Q ss_pred ccCCCCC
Q 007133 371 SGNHERD 377 (617)
Q Consensus 371 ~GNHD~~ 377 (617)
.||||-+
T Consensus 108 RGNHEsR 114 (303)
T KOG0372|consen 108 RGNHESR 114 (303)
T ss_pred eccchhh
Confidence 9999975
No 144
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=44.27 E-value=38 Score=34.80 Aligned_cols=50 Identities=22% Similarity=0.421 Sum_probs=34.4
Q ss_pred HHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCc-EEEecCccc
Q 007133 440 RFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVD-IAFFGHVHN 507 (617)
Q Consensus 440 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vd-lvlsGH~H~ 507 (617)
+.|+.+|+..++-..| ++-.|.| + ..+ -+.+.+|++++++| |||+||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------E----KEM-PEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------c----hhc-hHHHHHHHHHhCCCEEEEeCchhh
Confidence 5799999886544444 3333333 1 122 56899999999999 689999954
No 145
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=42.05 E-value=31 Score=36.78 Aligned_cols=24 Identities=17% Similarity=0.283 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHcCCcEEEecCccc
Q 007133 484 GRESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 484 ~r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
+.+.+++++.+.++|+++-||.=.
T Consensus 232 g~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 232 GPAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred cHHHHHHHHHHhCcceEEEcCccc
Confidence 367889999999999999999633
No 146
>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []. Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.
Probab=36.81 E-value=98 Score=33.46 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=26.0
Q ss_pred chhhHHHHHHHHHHHHhhhhccc-cCCCCCCCcceeEeEEEEeeCCC
Q 007133 3 ERFALYVLLCCVAANVGFSWAHV-NGFGEQPLSKIAIHKAIAAFHDS 48 (617)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 48 (617)
.||+++++|+.+++++.. ++.. ...--+||.-+.|..+.=.|.+.
T Consensus 300 ~r~~~c~~~~i~~lL~ig-~~~gFv~AttKpL~~v~v~~I~NVlaS~ 345 (387)
T PF12751_consen 300 SRFASCIYLSILLLLVIG-FAIGFVFATTKPLTDVQVVSIQNVLASE 345 (387)
T ss_pred hhhhHHHHHHHHHHHHHH-HHHHhhhhcCcccccceEEEeeeeeecc
Confidence 378888888765544422 1111 11245899988777665555554
No 147
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=36.65 E-value=57 Score=33.75 Aligned_cols=50 Identities=24% Similarity=0.464 Sum_probs=34.3
Q ss_pred HHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCc-EEEecCccc
Q 007133 440 RFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVD-IAFFGHVHN 507 (617)
Q Consensus 440 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vd-lvlsGH~H~ 507 (617)
+.|+.+|+....-..| +.-.|.| + ..+ -+.+..|+.+++.| |||+||+-.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------E----KEQ-PEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------h----HHh-hHHHHHHHHHcCCCEEEEeCchhh
Confidence 5799999876433333 3333332 1 123 67899999999999 689999875
No 148
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=33.06 E-value=1.3e+02 Score=31.53 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=16.3
Q ss_pred EEEecCCCCCcEEEEEEeee
Q 007133 247 TSFLKNLWPNTVYTYRIGHL 266 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~ 266 (617)
.-+|.+|+|+|+||+-|..-
T Consensus 16 ~~t~~~L~p~t~YyfdVF~v 35 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVFVV 35 (300)
T ss_pred eEEeccCCCCCeEEEEEEEE
Confidence 44678999999999998643
No 149
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=32.56 E-value=56 Score=27.91 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=15.4
Q ss_pred EEEEecCCCCCcEEEEEEee
Q 007133 246 HTSFLKNLWPNTVYTYRIGH 265 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~ 265 (617)
-.++|.+|+|++.|..+|..
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEEES--TTSEEEEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEE
Confidence 34679999999999999976
No 150
>TIGR02039 CysD sulfate adenylyltransferase, small subunit. In Escherichia coli, ATP sulfurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulfur-containing amino acids. Homologous to this E.coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulfurase and APS kinase activity, yet are involved in Nod factor sulfation, and sulfation of other macromolecules.
Probab=30.77 E-value=1.8e+02 Score=30.42 Aligned_cols=82 Identities=18% Similarity=0.232 Sum_probs=43.6
Q ss_pred CEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcE
Q 007133 420 MFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDI 499 (617)
Q Consensus 420 ~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdl 499 (617)
++.++.+||...|. +-+++.++.-+.. ..+.+|+.......+....+..........+-++.|...+.++++|+
T Consensus 49 p~~vl~IDTG~~F~---Et~efrd~~a~~~---gl~l~v~~~~~~~~~g~~~~~~~~~~~c~vlK~~pL~~al~e~g~da 122 (294)
T TIGR02039 49 PFPLLHVDTGWKFR---EMIAFRDHMVAKY---GLRLIVHSNEEGIADGINPFTEGSALHTDIMKTEALRQALDKNQFDA 122 (294)
T ss_pred CeEEEEEecCCCCH---HHHHHHHHHHHHh---CCCEEEEechhhhhcCccccccChHHHhhHHHHHHHHHHHHHcCCCE
Confidence 35678899987653 5677776655543 34433322211111111111100000112222467788888999999
Q ss_pred EEecCccc
Q 007133 500 AFFGHVHN 507 (617)
Q Consensus 500 vlsGH~H~ 507 (617)
++.||.=.
T Consensus 123 ~itG~RRD 130 (294)
T TIGR02039 123 AFGGARRD 130 (294)
T ss_pred EEecCChh
Confidence 99999644
No 151
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.20 E-value=69 Score=27.60 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=19.8
Q ss_pred CCeEEEEEecCCCCCcEEEEEEe
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIG 264 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~ 264 (617)
.+-+.++.+.++.+|+.|.|+|.
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~ 65 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVH 65 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEEC
Confidence 34578889999999999999994
No 152
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=29.02 E-value=3.3e+02 Score=23.46 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEecCccc
Q 007133 485 RESLQRLWQKYKVDIAFFGHVHN 507 (617)
Q Consensus 485 r~~l~~Ll~k~~VdlvlsGH~H~ 507 (617)
.+.+....+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46778888999999998888765
No 153
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=27.92 E-value=54 Score=32.62 Aligned_cols=66 Identities=26% Similarity=0.393 Sum_probs=37.4
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCC-Cc-EEEEcCccccCCCcHhHHHHHHHhhhhhhcCCC--eEE
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSN-ID-IVFHIGDITYANGYISQWDQFTAQVEPIASTVP--YMI 369 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP--~~~ 369 (617)
+-+-||+|.. ..-+.++.+.-.+ || --++.||.++ +|+.+. +.| ..+--+..+.| +-.
T Consensus 48 VTvCGDIHGQ---------------FyDL~eLFrtgG~vP~tnYiFmGDfVD-RGyySL-Etf-T~l~~LkaryP~~ITL 109 (306)
T KOG0373|consen 48 VTVCGDIHGQ---------------FYDLLELFRTGGQVPDTNYIFMGDFVD-RGYYSL-ETF-TLLLLLKARYPAKITL 109 (306)
T ss_pred eeEeeccchh---------------HHHHHHHHHhcCCCCCcceEEeccccc-cccccH-HHH-HHHHHHhhcCCceeEE
Confidence 6678999753 2345566664221 33 2467899994 565431 233 23323334444 556
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
..||||-+
T Consensus 110 lRGNHEsR 117 (306)
T KOG0373|consen 110 LRGNHESR 117 (306)
T ss_pred eeccchhh
Confidence 89999965
No 154
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=27.28 E-value=1.3e+02 Score=30.96 Aligned_cols=66 Identities=23% Similarity=0.253 Sum_probs=36.6
Q ss_pred EEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc-CCCc-EEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCeEE
Q 007133 294 VVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL-SNID-IVFHIGDITYANGYISQWDQFTAQVEPIA--STVPYMI 369 (617)
Q Consensus 294 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~~ 369 (617)
+.+.||.|.. ..-+-++.+-- ..|| -.++.||.+. .|+.+ ++-...+-.+. -.--+-.
T Consensus 62 vtvcGDvHGq---------------f~dl~ELfkiGG~~pdtnylfmGDyvd-rGy~S--vetVS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQ---------------FHDLIELFKIGGLAPDTNYLFMGDYVD-RGYYS--VETVSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchh---------------HHHHHHHHHccCCCCCcceeeeeeecc-cccch--HHHHHHHHHhhccccceeEE
Confidence 7789999753 22344454421 2244 4677899994 56544 22222222221 1234667
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
++||||..
T Consensus 124 lrGNHEsr 131 (319)
T KOG0371|consen 124 LRGNHESR 131 (319)
T ss_pred ecCchHHH
Confidence 99999964
No 155
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=26.46 E-value=2.5e+02 Score=33.61 Aligned_cols=117 Identities=20% Similarity=0.115 Sum_probs=63.3
Q ss_pred ceEeecC-CCCcEEEEEEeCCCCC---CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccC-----CC-eEE
Q 007133 177 PRLAQGK-SWDEMTVTWTSGYDIS---EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD-----PG-FIH 246 (617)
Q Consensus 177 ~~La~~~-~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~-----~g-~~h 246 (617)
.+++.+. +.+++.+.|..-.... --.-.+.|.+.+. ...+.++..+-||.-.-..--.+ |. -.|
T Consensus 492 l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~------qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~ 565 (1025)
T KOG4258|consen 492 LQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPF------QNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTH 565 (1025)
T ss_pred eeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCc------cccceecCccccccCcceEEeccCCcCCCccccc
Confidence 4444443 4788999997643210 0012344444442 12234666677773210000001 11 234
Q ss_pred -EEEecCCCCCcEEEEEEeeec----CCCCccceeeEEEEcCCCCCCCCceEEEEEeec
Q 007133 247 -TSFLKNLWPNTVYTYRIGHLL----HNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDM 300 (617)
Q Consensus 247 -~v~l~gL~Pgt~Y~Yrv~~~~----~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~ 300 (617)
...|.||+|.|.|-|-|.... .+.-...|++..|+|.|... ..++.++.-++.
T Consensus 566 ~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~P-spPl~~ls~sns 623 (1025)
T KOG4258|consen 566 PGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIP-SPPLDVLSKSNS 623 (1025)
T ss_pred cceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCC-CCcchhhhccCc
Confidence 678999999999999887541 11112568999999987542 334555555544
No 156
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=25.04 E-value=92 Score=26.56 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=20.3
Q ss_pred CCeEEEEEecCCCCCcEEEEEEee
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGH 265 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~ 265 (617)
.+-++++.+.++.+|..|.|+|..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 345788899999999999999964
No 157
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.98 E-value=86 Score=27.70 Aligned_cols=22 Identities=32% Similarity=0.700 Sum_probs=19.7
Q ss_pred CeEEEEEecCCCCCcEEEEEEe
Q 007133 243 GFIHTSFLKNLWPNTVYTYRIG 264 (617)
Q Consensus 243 g~~h~v~l~gL~Pgt~Y~Yrv~ 264 (617)
+-++++.+.++.+|+.|.|+|.
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~ 69 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVD 69 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEEC
Confidence 4578899999999999999995
No 158
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.94 E-value=96 Score=25.64 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=17.6
Q ss_pred eEEEEEecCCCCCcEEEEEEe
Q 007133 244 FIHTSFLKNLWPNTVYTYRIG 264 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~ 264 (617)
-++++.+.++ +|..|.|+|.
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEEC
Confidence 4678899999 9999999995
No 159
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=22.49 E-value=1.3e+02 Score=28.54 Aligned_cols=18 Identities=28% Similarity=0.183 Sum_probs=14.7
Q ss_pred EecCCCCCcEEEEEEeee
Q 007133 249 FLKNLWPNTVYTYRIGHL 266 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~ 266 (617)
.+++|.|||+|+.+.-..
T Consensus 105 qVtNL~pGTkY~isY~Vt 122 (184)
T PF07353_consen 105 QVTNLQPGTKYYISYLVT 122 (184)
T ss_pred EeeccCCCcEEEEEEEEe
Confidence 579999999998776543
No 160
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=21.96 E-value=2.1e+02 Score=29.39 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=50.1
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcH-hHH--HHHHHhhhhhhcCCCe
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYI-SQW--DQFTAQVEPIASTVPY 367 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~-~~w--d~f~~~i~~l~~~vP~ 367 (617)
..+|++.+|.+.... -..++.+++ .+|++++..|=.+|--|+. ..| +.-.+.++.+....+-
T Consensus 176 ~~~i~faSDvqGp~~-------------~~~l~~i~e--~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~ 240 (304)
T COG2248 176 KSSIVFASDVQGPIN-------------DEALEFILE--KRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNA 240 (304)
T ss_pred CeEEEEcccccCCCc-------------cHHHHHHHh--cCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcc
Confidence 368889999875432 246788887 6899999999999866653 223 3345566777777776
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
-.++.-|=.+
T Consensus 241 ~lViDHHllR 250 (304)
T COG2248 241 TLVIDHHLLR 250 (304)
T ss_pred eEEEeehhhc
Confidence 6777777654
No 161
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional
Probab=21.06 E-value=3.6e+02 Score=28.35 Aligned_cols=82 Identities=17% Similarity=0.235 Sum_probs=43.6
Q ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEE
Q 007133 421 FHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIA 500 (617)
Q Consensus 421 v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdlv 500 (617)
+.++.+||...+. +-++++++..+.. ..+.+++.....+......+..........+-+..|...+++++++.+
T Consensus 58 ~~vl~iDTG~~Fp---Et~ef~d~~a~~~---gl~l~v~~~~~~i~~g~~~~~~~~~~cC~~lK~~pL~~al~e~g~da~ 131 (301)
T PRK05253 58 FPLLHVDTGWKFP---EMIEFRDRRAKEL---GLELIVHSNPEGIARGINPFRHGSAKHTNAMKTEGLKQALEKYGFDAA 131 (301)
T ss_pred eeEEEEeCCCCCH---HHHHHHHHHHHHh---CCCEEEEeChHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 5678899987653 4466666655553 445444322211100000000000011122224677788889999999
Q ss_pred EecCcccc
Q 007133 501 FFGHVHNY 508 (617)
Q Consensus 501 lsGH~H~Y 508 (617)
+.||...=
T Consensus 132 ~~G~RrDE 139 (301)
T PRK05253 132 FGGARRDE 139 (301)
T ss_pred Eeccccch
Confidence 99998763
No 162
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=20.53 E-value=53 Score=37.67 Aligned_cols=49 Identities=27% Similarity=0.384 Sum_probs=29.7
Q ss_pred HHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcccCCCCCC
Q 007133 323 DQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGSGNHERDW 378 (617)
Q Consensus 323 ~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~ 378 (617)
..+++. .-+|-+-++|||.+. |... |..++.+. ..--+=+-+||||.-|
T Consensus 177 ~~lIqr-L~VDhLHIvGDIyDR-Gp~p--d~ImD~Lm---~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 177 SELIQR-LAVDHLHIVGDIYDR-GPRP--DKIMDRLM---NYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHH-HhhhheeecccccCC-CCCh--hHHHHHHh---cCCCccccccchHHHH
Confidence 334443 357889999999954 4332 33444332 3334456899999876
Done!