Query 007133
Match_columns 617
No_of_seqs 467 out of 2867
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:00:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007133hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 9.8E-61 3.4E-65 521.6 40.7 386 170-599 21-423 (426)
2 2qfp_A Purple acid phosphatase 100.0 8.4E-60 2.9E-64 513.8 38.8 388 170-601 15-418 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 5.3E-34 1.8E-38 317.7 36.9 380 178-601 12-483 (527)
4 3tgh_A Glideosome-associated p 100.0 4.4E-35 1.5E-39 309.0 18.6 265 291-602 3-311 (342)
5 1ute_A Protein (II purple acid 100.0 1.2E-29 3.9E-34 262.3 16.9 263 291-600 6-305 (313)
6 3ib7_A ICC protein; metallopho 99.9 9E-22 3.1E-26 205.4 21.0 249 290-588 24-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 5.4E-21 1.9E-25 193.9 20.5 243 292-584 1-254 (274)
8 2nxf_A Putative dimetal phosph 99.9 4.2E-21 1.4E-25 198.6 18.9 250 290-583 4-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.7 4.2E-16 1.4E-20 169.8 24.0 216 289-511 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.5 1.8E-12 6.2E-17 127.1 18.3 172 291-506 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.4 8.2E-12 2.8E-16 125.4 16.3 183 291-506 5-222 (260)
12 1z2w_A Vacuolar protein sortin 99.3 6.1E-10 2.1E-14 107.3 21.6 180 292-597 11-191 (192)
13 2a22_A Vacuolar protein sortin 99.2 2.2E-10 7.4E-15 112.7 18.5 190 291-597 25-215 (215)
14 2q8u_A Exonuclease, putative; 99.2 2.1E-11 7.1E-16 128.0 11.8 258 291-595 18-289 (336)
15 3ck2_A Conserved uncharacteriz 99.2 4.2E-10 1.4E-14 106.9 18.1 165 292-595 7-172 (176)
16 1nnw_A Hypothetical protein; s 99.2 1.5E-10 5.2E-15 115.9 12.2 210 292-582 2-222 (252)
17 3rl5_A Metallophosphoesterase 99.1 5E-10 1.7E-14 115.0 15.6 208 290-547 58-280 (296)
18 3av0_A DNA double-strand break 99.0 6.3E-09 2.1E-13 111.3 15.4 84 290-377 19-108 (386)
19 3tho_B Exonuclease, putative; 99.0 2.8E-09 9.5E-14 113.8 12.2 197 292-511 1-217 (379)
20 3rqz_A Metallophosphoesterase; 98.9 6.4E-09 2.2E-13 104.1 12.6 151 292-508 4-154 (246)
21 3qfm_A SAPH, putative uncharac 98.9 1.4E-08 4.8E-13 103.3 13.8 216 291-583 11-228 (270)
22 1s3l_A Hypothetical protein MJ 98.8 1E-07 3.6E-12 91.6 17.4 61 292-377 26-88 (190)
23 2kkn_A Uncharacterized protein 98.7 2.3E-07 7.7E-12 88.4 14.9 64 292-377 23-86 (178)
24 1ii7_A MRE11 nuclease; RAD50, 98.6 3.3E-07 1.1E-11 95.8 15.1 82 292-377 1-88 (333)
25 1xm7_A Hypothetical protein AQ 98.6 1.9E-08 6.3E-13 97.0 5.1 148 292-510 2-153 (195)
26 4fbw_A DNA repair protein RAD3 98.5 4.7E-06 1.6E-10 89.4 21.4 86 289-377 11-133 (417)
27 3t1i_A Double-strand break rep 98.5 1.3E-06 4.5E-11 94.1 17.1 87 288-377 29-152 (431)
28 4fbk_A DNA repair and telomere 98.5 6.1E-06 2.1E-10 89.4 21.6 86 289-377 74-196 (472)
29 1hp1_A 5'-nucleotidase; metall 98.1 1.2E-05 4.1E-10 89.1 13.0 196 291-509 8-232 (516)
30 2z1a_A 5'-nucleotidase; metal- 98.1 1.3E-05 4.6E-10 89.4 12.9 187 290-510 28-244 (552)
31 3qfk_A Uncharacterized protein 98.0 0.00016 5.3E-09 80.3 19.1 201 290-509 18-252 (527)
32 4h2g_A 5'-nucleotidase; dimer, 97.9 0.00012 4.2E-09 81.5 15.4 190 290-509 24-245 (546)
33 2z06_A Putative uncharacterize 97.8 0.00018 6.2E-09 71.8 13.8 169 292-508 1-174 (252)
34 3ztv_A NAD nucleotidase, NADN; 97.8 3.2E-05 1.1E-09 86.8 9.5 193 289-509 10-231 (579)
35 3ive_A Nucleotidase; structura 97.8 0.00012 4.2E-09 80.8 13.8 203 291-508 6-237 (509)
36 1t70_A Phosphatase; crystal, X 97.8 0.00033 1.1E-08 70.1 14.1 172 292-509 1-178 (255)
37 2wdc_A SOXB, sulfur oxidation 97.7 0.00097 3.3E-08 74.5 18.6 144 332-509 123-291 (562)
38 1su1_A Hypothetical protein YF 97.6 9.9E-05 3.4E-09 71.7 7.5 83 272-377 12-101 (208)
39 1t71_A Phosphatase, conserved 97.5 0.00067 2.3E-08 68.8 13.0 174 292-509 5-188 (281)
40 2dju_A Receptor-type tyrosine- 97.3 0.0016 5.6E-08 54.7 10.4 93 171-286 8-101 (106)
41 2ede_A Netrin receptor DCC; tu 97.2 0.0025 8.4E-08 54.5 11.2 99 172-288 10-111 (114)
42 1x5x_A Fibronectin type-III do 97.2 0.0011 3.8E-08 56.4 8.6 93 170-285 7-103 (109)
43 1x5l_A Ephrin type-A receptor 97.2 0.001 3.5E-08 56.6 8.1 96 171-288 11-108 (111)
44 1x5z_A Receptor-type tyrosine- 97.1 0.0017 5.8E-08 55.5 9.1 93 171-286 18-110 (115)
45 2edd_A Netrin receptor DCC; tu 97.1 0.0019 6.5E-08 56.9 9.5 93 171-285 19-117 (123)
46 1x4y_A Biregional cell adhesio 97.1 0.0041 1.4E-07 53.4 11.5 42 246-287 69-110 (114)
47 3c9f_A 5'-nucleotidase; 2',3'- 97.1 0.003 1E-07 70.4 13.2 85 290-378 14-108 (557)
48 4h1s_A 5'-nucleotidase; hydrol 97.1 0.014 4.7E-07 64.6 18.0 190 292-509 4-223 (530)
49 2djs_A Ephrin type-B receptor 97.1 0.0019 6.6E-08 54.7 8.7 93 171-286 8-103 (108)
50 2crz_A Fibronectin type-III do 97.0 0.0013 4.5E-08 56.1 7.4 95 170-286 8-105 (110)
51 1x5f_A Neogenin; RGM binding, 97.0 0.0045 1.5E-07 53.3 10.5 94 171-285 18-114 (120)
52 1x4x_A Fibronectin type-III do 97.0 0.0021 7.3E-08 54.6 8.1 92 171-286 8-101 (106)
53 1x5j_A Neogenin; RGM binding, 97.0 0.0015 5E-08 56.7 7.0 93 171-285 9-107 (113)
54 1qr4_A Protein (tenascin); fib 96.9 0.028 9.6E-07 52.0 16.1 92 170-285 94-185 (186)
55 2crm_A Fibronectin type-III do 96.9 0.0013 4.5E-08 57.0 6.2 95 170-286 17-115 (120)
56 2ibg_A CG9211-PA, GH03927P; IH 96.9 0.033 1.1E-06 52.7 16.6 133 129-284 65-212 (214)
57 2edy_A Receptor-type tyrosine- 96.9 0.0007 2.4E-08 56.8 4.2 38 247-284 65-102 (103)
58 1x5a_A Ephrin type-A receptor 96.9 0.0048 1.7E-07 52.7 9.3 41 248-288 64-104 (107)
59 2db8_A Tripartite motif protei 96.8 0.0011 3.7E-08 57.0 5.1 94 172-287 8-106 (110)
60 3gve_A YFKN protein; alpha-bet 96.8 0.0085 2.9E-07 62.5 12.7 49 452-509 206-254 (341)
61 2dmk_A Midline 2 isoform 2; mi 96.8 0.0025 8.6E-08 56.3 7.4 101 169-285 14-118 (127)
62 2haz_A N-CAM 1, neural cell ad 96.8 0.0022 7.5E-08 54.4 6.6 39 246-284 66-104 (105)
63 3jyf_A 2',3'-cyclic nucleotide 96.8 0.018 6E-07 60.1 14.8 86 291-378 8-106 (339)
64 2e7h_A Ephrin type-B receptor 96.8 0.005 1.7E-07 52.4 8.7 95 171-286 8-104 (109)
65 1x5g_A Neogenin; RGM binding, 96.8 0.0038 1.3E-07 53.5 8.0 91 171-285 18-110 (116)
66 2ee2_A Contactin-1; neural cel 96.7 0.0048 1.7E-07 53.3 8.5 95 173-287 21-115 (119)
67 1wfo_A Sidekick 2; FN3, cell a 96.7 0.0069 2.3E-07 53.0 9.5 95 171-285 28-124 (130)
68 2kbg_A N-CAM 2, neural cell ad 96.7 0.0042 1.4E-07 54.2 7.9 83 183-286 19-103 (114)
69 2dm4_A Sortilin-related recept 96.7 0.011 3.7E-07 50.0 10.3 91 171-284 8-101 (108)
70 1g5b_A Serine/threonine protei 96.7 0.0014 4.8E-08 63.8 5.0 64 292-377 13-79 (221)
71 2ed8_A Netrin receptor DCC; tu 96.7 0.012 4E-07 49.6 10.2 91 171-285 8-100 (106)
72 1x4z_A Biregional cell adhesio 96.6 0.0052 1.8E-07 53.3 8.1 97 169-285 16-116 (121)
73 1bpv_A Titin, A71, connectin; 96.6 0.0083 2.8E-07 51.9 9.3 92 171-283 11-106 (112)
74 2dle_A Receptor-type tyrosine- 96.6 0.016 5.6E-07 49.4 11.0 91 170-287 7-99 (104)
75 1va9_A DOWN syndrome cell adhe 96.6 0.009 3.1E-07 51.4 9.4 96 173-285 18-117 (122)
76 2ed7_A Netrin receptor DCC; tu 96.6 0.0084 2.9E-07 51.4 8.9 93 170-285 17-113 (119)
77 1wfu_A Unnamed protein product 96.5 0.0038 1.3E-07 55.0 6.2 40 247-286 76-115 (120)
78 1x3d_A Fibronectin type-III do 96.5 0.0088 3E-07 51.4 8.4 92 170-286 17-113 (118)
79 3p4l_A Neogenin; iron homeosta 96.5 0.016 5.5E-07 54.9 11.0 94 173-284 108-204 (211)
80 2ed9_A Netrin receptor DCC; tu 96.5 0.0077 2.6E-07 52.1 8.0 89 173-284 31-123 (124)
81 3n06_B PRL-R, prolactin recept 96.4 0.029 1E-06 53.2 12.7 93 170-284 102-204 (210)
82 1k85_A Chitinase A1; fibronect 96.4 0.02 6.7E-07 46.6 9.5 84 171-282 4-88 (88)
83 1x5h_A Neogenin; RGM binding, 96.3 0.028 9.7E-07 49.0 11.1 41 245-285 76-116 (132)
84 2rb8_A Tenascin; beta sheet,lo 96.3 0.018 6.2E-07 48.7 9.4 92 171-286 3-95 (104)
85 2dfj_A Diadenosinetetraphospha 96.3 0.0045 1.5E-07 62.8 6.3 65 293-377 2-69 (280)
86 3p4l_A Neogenin; iron homeosta 96.3 0.026 9E-07 53.4 11.4 92 172-285 6-103 (211)
87 2yrz_A Integrin beta-4; GP150, 96.3 0.0099 3.4E-07 51.0 7.6 91 170-284 17-112 (118)
88 2dn7_A Receptor-type tyrosine- 96.2 0.027 9.3E-07 47.2 9.8 79 184-284 19-99 (107)
89 2edx_A Protein tyrosine phosph 96.2 0.016 5.5E-07 50.6 8.4 41 245-285 78-118 (134)
90 2qjc_A Diadenosine tetraphosph 96.1 0.0054 1.9E-07 61.5 5.8 64 292-377 19-85 (262)
91 2dlh_A Receptor-type tyrosine- 96.1 0.015 5E-07 49.9 7.8 40 246-285 76-115 (121)
92 1wis_A KIAA1514 protein; FNIII 96.1 0.014 4.9E-07 50.8 7.7 98 170-286 17-120 (124)
93 2yuw_A Myosin binding protein 96.0 0.016 5.4E-07 49.2 7.5 84 171-276 8-95 (110)
94 1uem_A KIAA1568 protein; immun 96.0 0.011 3.8E-07 50.5 6.6 94 170-285 15-112 (117)
95 1wf5_A Sidekick 2 protein; FNI 96.0 0.022 7.4E-07 49.0 8.5 93 170-285 17-116 (121)
96 2cuh_A Tenascin-X; fibronectin 96.0 0.028 9.6E-07 48.3 9.1 92 170-286 7-98 (115)
97 2dkm_A Collagen alpha-1(XX) ch 96.0 0.033 1.1E-06 46.9 9.3 92 171-286 9-100 (104)
98 2ee3_A Collagen alpha-1(XX) ch 96.0 0.045 1.5E-06 46.9 10.1 91 172-286 9-99 (108)
99 2e3v_A Neural cell adhesion mo 95.8 0.046 1.6E-06 47.5 9.8 40 246-285 67-106 (122)
100 2z72_A Protein-tyrosine-phosph 95.8 0.0099 3.4E-07 62.0 6.3 68 292-377 71-153 (342)
101 2cum_A Tenascin-X; hexabrachio 95.8 0.068 2.3E-06 45.1 10.4 91 170-285 7-97 (105)
102 2vkw_A Neural cell adhesion mo 95.8 0.033 1.1E-06 52.6 9.2 97 170-285 8-107 (209)
103 1wk0_A KIAA0970 protein; fibro 95.7 0.024 8.2E-07 51.1 7.6 40 246-285 82-121 (137)
104 3b83_A Ten-D3; beta sheet, com 95.7 0.089 3.1E-06 43.9 10.6 75 171-267 2-76 (100)
105 2dbj_A Proto-oncogene tyrosine 95.6 0.038 1.3E-06 48.0 8.4 40 246-285 79-118 (124)
106 3n1f_C Cell adhesion molecule- 95.6 0.048 1.7E-06 45.9 8.8 91 173-282 7-101 (102)
107 3f7q_A Integrin beta-4, GP150; 95.6 0.06 2E-06 52.0 10.5 100 171-286 99-201 (234)
108 2ic2_A CG9211-PA, GH03927P; IH 95.6 0.069 2.3E-06 46.1 9.8 82 173-267 5-92 (115)
109 1ujt_A KIAA1568 protein; fibro 95.5 0.057 1.9E-06 47.3 9.2 41 245-285 74-114 (120)
110 1cd9_B G-CSF-R, protein (G-CSF 95.5 0.15 5E-06 48.3 12.9 95 170-284 108-213 (215)
111 2jll_A NCAM2, neural cell adhe 95.5 0.097 3.3E-06 54.0 12.6 40 246-286 349-388 (389)
112 2ie4_C PP2A-alpha;, serine/thr 95.5 0.015 5.3E-07 59.7 6.1 68 292-377 50-121 (309)
113 3r8q_A Fibronectin; heparin, F 95.5 0.22 7.4E-06 49.4 14.5 103 170-298 112-214 (290)
114 1uc6_A CNTF receptor, ciliary 95.4 0.049 1.7E-06 46.3 8.3 92 167-281 4-104 (109)
115 2yux_A Myosin-binding protein 95.4 0.017 6E-07 49.9 5.5 79 170-270 17-98 (120)
116 1x5y_A Myosin binding protein 95.4 0.032 1.1E-06 47.3 7.1 85 170-275 8-95 (111)
117 2gee_A Hypothetical protein; f 95.4 0.47 1.6E-05 44.5 16.1 74 173-267 116-189 (203)
118 3f7q_A Integrin beta-4, GP150; 95.4 0.07 2.4E-06 51.5 10.4 90 172-284 7-96 (234)
119 2cui_A Tenascin-X; fibronectin 95.4 0.09 3.1E-06 45.4 9.9 94 173-286 11-109 (112)
120 1uey_A KIAA0343 protein; immun 95.4 0.029 1E-06 48.8 6.8 38 249-286 77-115 (127)
121 1uen_A KIAA0343 protein; immun 95.4 0.042 1.4E-06 47.3 7.7 40 246-285 80-119 (125)
122 3teu_A Fibcon; FN3 domain, fib 95.4 0.069 2.4E-06 44.1 8.8 89 172-285 3-91 (98)
123 1axi_B HGHBP, growth hormone r 95.3 0.093 3.2E-06 51.3 11.1 93 169-283 129-234 (236)
124 1wfn_A Sidekick 2; FN3, cell a 95.3 0.11 3.6E-06 44.5 10.1 88 170-278 17-106 (119)
125 3lpw_A A77-A78 domain from tit 95.3 0.054 1.8E-06 50.0 8.6 78 170-270 102-182 (197)
126 2vkw_A Neural cell adhesion mo 95.2 0.11 3.7E-06 48.9 10.8 90 171-282 110-201 (209)
127 2d9q_B Granulocyte colony-stim 95.2 0.14 4.7E-06 51.7 12.3 133 130-285 158-308 (313)
128 2gee_A Hypothetical protein; f 95.2 0.14 4.9E-06 48.1 11.6 103 173-299 25-127 (203)
129 1cfb_A Drosophila neuroglian; 95.2 0.051 1.8E-06 51.1 8.4 94 170-285 5-102 (205)
130 1bqu_A Protein (GP130); cytoki 95.2 0.065 2.2E-06 50.7 9.1 98 170-285 103-206 (215)
131 3icf_A PPT, serine/threonine-p 95.1 0.033 1.1E-06 57.7 7.3 68 292-377 64-136 (335)
132 1fjm_A Protein serine/threonin 95.1 0.022 7.5E-07 59.0 6.0 67 293-377 58-128 (330)
133 3lpw_A A77-A78 domain from tit 95.1 0.092 3.2E-06 48.4 9.7 91 170-282 5-98 (197)
134 1qr4_A Protein (tenascin); fib 95.1 0.12 4E-06 47.7 10.4 90 170-286 6-97 (186)
135 1v5j_A KIAA1355 protein, RSGI 95.0 0.044 1.5E-06 47.1 6.7 92 172-285 9-102 (108)
136 1fnf_A Fibronectin; RGD, extra 95.0 0.23 7.9E-06 50.9 13.4 84 170-275 275-358 (368)
137 3mtr_A N-CAM-1, NCAM-1, neural 94.9 0.13 4.6E-06 48.4 10.6 98 170-287 113-214 (215)
138 3fl7_A Ephrin receptor; ATP-bi 94.8 0.074 2.5E-06 58.8 9.4 94 170-286 440-535 (536)
139 3mpc_A FN3-like protein; fibro 94.7 0.089 3.1E-06 44.7 7.8 89 170-282 4-93 (103)
140 2qbw_A PDZ-fibronectin fusion 94.7 0.065 2.2E-06 50.6 7.6 89 172-282 105-193 (195)
141 3e7a_A PP-1A, serine/threonine 94.7 0.035 1.2E-06 56.6 6.0 67 293-377 57-127 (299)
142 3h63_A Serine/threonine-protei 94.7 0.063 2.1E-06 55.2 7.8 68 292-377 60-132 (315)
143 3r8q_A Fibronectin; heparin, F 94.7 0.17 5.9E-06 50.1 11.1 93 171-286 21-113 (290)
144 3up1_A Interleukin-7 receptor 94.7 0.15 5.3E-06 49.6 10.3 97 169-286 111-216 (223)
145 3e0j_A DNA polymerase subunit 94.6 0.3 1E-05 52.7 13.3 143 290-448 199-378 (476)
146 2b5i_B Interleukin-2 receptor 94.6 0.17 5.8E-06 48.8 10.4 96 170-285 105-208 (214)
147 1j8k_A Fibronectin; EDA, TYPEI 94.5 0.17 6E-06 41.2 8.9 88 173-283 4-91 (94)
148 3v6o_A Leptin receptor; recept 94.4 0.17 6E-06 48.0 10.0 88 169-276 108-197 (206)
149 3ll8_A Serine/threonine-protei 94.4 0.047 1.6E-06 57.0 6.1 67 293-377 71-141 (357)
150 3qwq_B Adnectin; cell surface 94.3 0.19 6.5E-06 43.3 9.1 74 171-266 4-77 (114)
151 1i1r_A GP130, interleukin-6 re 94.1 0.14 4.6E-06 51.5 8.8 97 170-284 199-301 (303)
152 2ha1_A Fibronectin; beta sandw 94.1 0.24 8.2E-06 46.2 10.0 90 173-284 2-93 (201)
153 3k2m_C Monobody HA4; engineere 94.0 0.15 5.1E-06 42.6 7.6 75 172-267 6-81 (101)
154 2w1n_A O-GLCNACASE NAGJ; hexos 94.0 0.23 7.8E-06 47.9 9.5 35 249-283 203-237 (238)
155 2ocf_D Fibronectin; estrogen r 94.0 0.15 5E-06 44.5 7.7 74 171-266 29-102 (121)
156 1eer_B Epobp, erythropoietin r 94.0 0.16 5.5E-06 49.0 8.8 93 170-283 121-222 (227)
157 2ibg_A CG9211-PA, GH03927P; IH 94.0 0.18 6.1E-06 47.4 8.9 96 171-276 2-100 (214)
158 1fnf_A Fibronectin; RGD, extra 93.9 0.18 6.2E-06 51.6 9.6 93 171-285 2-94 (368)
159 1n26_A IL-6 receptor alpha cha 93.9 0.3 1E-05 49.7 11.0 92 170-282 196-295 (325)
160 3tes_A Tencon; fibronectin typ 93.8 0.23 7.8E-06 41.3 8.2 71 174-266 5-75 (98)
161 1x5i_A Neogenin; RGM binding, 93.7 0.24 8.3E-06 43.1 8.7 89 171-284 28-118 (126)
162 1wao_1 Serine/threonine protei 93.7 0.11 3.8E-06 56.3 7.8 68 292-377 213-285 (477)
163 3l5i_A Interleukin-6 receptor 93.7 0.1 3.5E-06 51.6 7.0 38 246-284 253-290 (290)
164 1oww_A FN, fibronectin first t 93.7 0.31 1E-05 40.3 8.3 83 174-282 8-96 (98)
165 1aui_A Calcineurin, serine/thr 93.6 0.068 2.3E-06 58.2 5.8 67 293-377 84-154 (521)
166 2q7n_A Leukemia inhibitory fac 93.3 0.27 9.1E-06 53.7 9.9 131 130-285 345-487 (488)
167 3qht_C Monobody YSMB-1; fibron 93.1 0.15 5.1E-06 42.2 6.0 74 171-266 5-78 (97)
168 1tdq_A Tenascin-R; extracellul 93.1 0.47 1.6E-05 46.6 10.6 105 170-299 14-118 (283)
169 3t04_D Monobody 7C12; engineer 93.0 0.21 7.2E-06 41.9 6.9 75 171-266 8-84 (103)
170 1tdq_A Tenascin-R; extracellul 92.7 0.71 2.4E-05 45.2 11.3 93 170-285 104-198 (283)
171 2ekj_A Collagen alpha-1(XX) ch 92.5 0.057 2E-06 45.5 2.6 76 170-267 7-82 (105)
172 3tgx_A Interleukin-21 receptor 92.5 0.35 1.2E-05 46.6 8.5 99 169-286 99-210 (219)
173 3e0g_A Leukemia inhibitory fac 92.3 0.4 1.4E-05 52.2 9.6 134 131-285 341-482 (483)
174 3t1w_A Four-domain fibronectin 91.9 0.57 2E-05 48.0 9.9 89 172-283 4-93 (375)
175 3l5h_A Interleukin-6 receptor 91.7 0.2 7E-06 55.0 6.5 98 170-285 198-301 (589)
176 2lfe_A E3 ubiquitin-protein li 91.2 1.8 6.1E-05 37.6 10.3 99 45-171 31-138 (138)
177 2edb_A Netrin receptor DCC; tu 91.1 0.47 1.6E-05 40.5 6.9 74 171-268 18-93 (116)
178 3t1w_A Four-domain fibronectin 91.1 2.3 7.9E-05 43.4 13.5 93 171-285 187-279 (375)
179 1cfb_A Drosophila neuroglian; 91.0 0.71 2.4E-05 43.0 8.8 38 246-283 164-202 (205)
180 3l5i_A Interleukin-6 receptor 90.9 8.1 0.00028 37.5 16.9 68 185-270 114-181 (290)
181 3csg_A MBP, maltose-binding pr 90.8 0.35 1.2E-05 51.8 7.2 87 172-280 371-457 (461)
182 2jll_A NCAM2, neural cell adhe 90.2 1.7 5.8E-05 44.4 11.5 93 170-285 195-291 (389)
183 2b5i_C Cytokine receptor commo 89.4 0.89 3E-05 42.7 7.9 91 170-283 98-194 (199)
184 1wj3_A KIAA1496 protein; beta 88.7 0.74 2.5E-05 39.4 6.2 37 247-284 74-110 (117)
185 3bpo_C Interleukin-13 receptor 88.7 0.99 3.4E-05 45.4 8.2 105 170-284 199-312 (314)
186 2erj_C Cytokine receptor commo 88.5 1.2 4.3E-05 43.6 8.5 93 170-285 136-234 (247)
187 1zlg_A Anosmin 1; insulin-like 87.6 2.7 9.3E-05 47.4 11.7 42 244-285 332-376 (680)
188 1zlg_A Anosmin 1; insulin-like 87.6 2.1 7E-05 48.4 10.7 37 247-283 224-261 (680)
189 3uto_A Twitchin; kinase, muscl 87.4 0.96 3.3E-05 50.2 7.7 74 170-267 9-86 (573)
190 1q38_A Fibronectin; amyloid fi 87.2 0.38 1.3E-05 38.6 2.9 41 242-283 34-74 (89)
191 2v5y_A Receptor-type tyrosine- 87.0 5.6 0.00019 44.9 14.0 96 172-285 361-460 (731)
192 1iar_B Protein (interleukin-4 87.0 1.1 3.7E-05 42.5 6.8 98 169-285 96-201 (207)
193 2gys_A Cytokine receptor commo 86.6 4.5 0.00015 42.4 12.1 96 170-286 108-217 (419)
194 3s98_A Interferon alpha/beta r 85.6 5 0.00017 40.3 11.4 39 246-284 159-199 (306)
195 3se4_A Interferon alpha/beta r 85.6 8.2 0.00028 40.3 13.5 39 246-284 163-203 (414)
196 2v5y_A Receptor-type tyrosine- 85.4 5.7 0.0002 44.9 13.0 92 170-285 261-357 (731)
197 2h41_A Fibronectin; beta sandw 84.8 0.57 1.9E-05 39.1 3.1 62 184-266 18-79 (95)
198 3lqm_A Interleukin-10 receptor 84.7 3.1 0.00011 39.0 8.7 39 247-285 156-196 (201)
199 3fl7_A Ephrin receptor; ATP-bi 83.7 2.6 8.7E-05 46.4 8.7 42 245-286 399-443 (536)
200 2dtg_E Insulin receptor; IR ec 82.4 1.8 6.2E-05 50.7 7.2 40 246-285 549-593 (897)
201 4go6_B HCF C-terminal chain 1; 82.3 1.3 4.5E-05 42.7 5.1 38 247-284 47-84 (232)
202 2gys_A Cytokine receptor commo 82.2 4.4 0.00015 42.5 9.6 37 246-282 377-418 (419)
203 2ha1_A Fibronectin; beta sandw 81.9 2.8 9.7E-05 38.6 7.2 26 245-270 164-189 (201)
204 4go6_B HCF C-terminal chain 1; 81.5 12 0.00041 35.7 11.7 36 250-285 167-202 (232)
205 1bqu_A Protein (GP130); cytoki 77.7 4.3 0.00015 37.7 6.9 36 246-282 62-98 (215)
206 3l5h_A Interleukin-6 receptor 75.8 0.89 3.1E-05 49.8 1.7 37 246-283 552-588 (589)
207 2dtg_E Insulin receptor; IR ec 72.2 1 3.5E-05 52.8 1.1 40 247-287 852-891 (897)
208 2nzi_A Titin; IG-domain, FNIII 71.9 7.3 0.00025 38.0 7.2 83 170-276 198-284 (305)
209 4doh_R Interleukin-20 receptor 70.2 5.3 0.00018 38.2 5.6 40 246-285 173-214 (221)
210 3se4_A Interferon alpha/beta r 65.4 3.6 0.00012 43.1 3.5 40 246-285 367-410 (414)
211 3lb6_C IL-13, interleukin-13 r 64.2 2.1 7.1E-05 44.7 1.3 39 248-286 292-337 (380)
212 4doh_B Interleukin-20 receptor 63.7 7.6 0.00026 36.6 5.1 81 182-284 118-200 (206)
213 2uvf_A Exopolygalacturonase; G 62.4 9.1 0.00031 42.7 6.2 106 170-285 34-153 (608)
214 1su1_A Hypothetical protein YF 62.0 18 0.00063 34.0 7.5 63 496-595 143-205 (208)
215 1i1r_A GP130, interleukin-6 re 60.9 13 0.00046 36.5 6.6 22 246-267 158-180 (303)
216 1cd9_B G-CSF-R, protein (G-CSF 60.3 62 0.0021 29.5 10.9 38 244-282 66-103 (215)
217 3flo_A DNA polymerase alpha su 53.4 16 0.00056 39.1 6.0 78 290-377 146-247 (460)
218 3n06_B PRL-R, prolactin recept 52.1 76 0.0026 28.9 10.0 92 172-282 5-97 (210)
219 3d85_D IL-12B, interleukin-12 49.8 32 0.0011 34.3 7.3 84 169-277 211-300 (306)
220 1g5b_A Serine/threonine protei 47.3 8.1 0.00028 36.7 2.2 16 494-509 176-191 (221)
221 4a2l_A BT_4663, two-component 39.3 74 0.0025 35.9 9.1 39 244-285 742-783 (795)
222 3lb6_C IL-13, interleukin-13 r 37.0 3.1E+02 0.011 27.8 12.7 28 170-197 31-58 (380)
223 2d9q_B Granulocyte colony-stim 32.3 3.5E+02 0.012 26.0 13.9 38 245-283 161-198 (313)
224 3qt2_A Interleukin-5 receptor 31.1 99 0.0034 31.0 7.5 73 169-267 219-294 (317)
225 3b4n_A Endo-pectate lyase; pec 28.4 99 0.0034 31.4 6.6 21 250-270 75-95 (344)
226 3ott_A Two-component system se 22.1 2E+02 0.0067 32.1 8.6 37 245-284 709-748 (758)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=9.8e-61 Score=521.57 Aligned_cols=386 Identities=26% Similarity=0.429 Sum_probs=307.6
Q ss_pred CCCCCccceEeecCC-CCcEEEEEEeC-CCCCCCCCEEEEeccCCCcceecccc-eEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKS-WDEMTVTWTSG-YDISEAAPFVEWGLKGDLQMHSPAGT-LTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~-~~~m~V~W~T~-~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
++++|.|+||+++.+ .++|+|+|+|. .. ++.++|+||++++.....+.++ .+|...+ ..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEecC-----------CcCCEEE
Confidence 567999999999988 49999999998 43 3678999998876544433322 2333210 2368999
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHH
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLI 326 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (617)
+|+|+||+|||+|+|||++ | .||+.++|+|+|.++...++||+++||+|.... ...+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~----g--~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~------------~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGF----G--DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHD------------SNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECC----G--GGCEEEEEECCCCCCTTCCEEEEEECSCTTBHH------------HHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECC----C--CccceeEEECCCCCCCCCCeEEEEEEeCCCCCc------------hHHHHHHHH
Confidence 9999999999999999985 2 489999999999887778899999999986421 235677776
Q ss_pred HhcCCCcEEEEcCccccCCCc----HhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCcccccee
Q 007133 327 RDLSNIDIVFHIGDITYANGY----ISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMF 402 (617)
Q Consensus 327 ~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f 402 (617)
++..++|||||+||++|+++. ..+|++|.+.++++.+.+|+|+++||||+.+... .. ..+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~~----~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---IG----EYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---GT----BCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---cc----cccCChhheEEE
Confidence 643489999999999998765 4679999999999988999999999999874210 00 011223566778
Q ss_pred ccCCC---CCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCc
Q 007133 403 YVPAE---NRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSF 479 (617)
Q Consensus 403 ~~P~~---~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~ 479 (617)
.||.+ ...+.||+|++|+++||+|||+.++..+.+|++||+++|+++++++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 88853 2357899999999999999999877778999999999999988788999999999999 87654332222
Q ss_pred cchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCC--cccccCCCCceEEEEECCCCCCCC---CCCCCCC
Q 007133 480 EEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTE--KYHYTGTVNGTIHVVVGGGGSHLS---DFSEVTP 554 (617)
Q Consensus 480 ~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~--~~~y~~~~~g~v~iv~G~gG~~l~---~~~~~~~ 554 (617)
+.+ |+.|+++|.+++||++|+||+|.|||++|++++++.... ...| .+.+|++||++|+||.... .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 899999999999999999999999999999987642111 1112 2367999999999998642 3445688
Q ss_pred CcceeeeCcceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecC
Q 007133 555 NWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGK--VYDSFTISRDY 599 (617)
Q Consensus 555 ~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~--v~D~f~i~k~~ 599 (617)
+|+.|+..+|||++|++.|+++|.++|+++.||+ ++|+|+|.|.+
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=8.4e-60 Score=513.85 Aligned_cols=388 Identities=25% Similarity=0.401 Sum_probs=303.1
Q ss_pred CCCCCccceEeecCC-CCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccc-eEEeecccCCCCCccccccCCCeEEE
Q 007133 170 NPKAPLYPRLAQGKS-WDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGT-LTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 170 ~~~~P~~~~La~~~~-~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
++++|.|+||+++++ .++|+|+|+|... .+.+.|+||+.++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 557899999999987 5999999999743 3578999999876554444333 2343210 24689999
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHH
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIR 327 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (617)
|+|+||+|||+|+|||+.. .||+.++|+|+|.+++..++||+++||+|.... ...+++++.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~------------~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFD------------SNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBHH------------HHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCCC------------hHHHHHHHHh
Confidence 9999999999999999863 378999999999887777899999999987521 2345666655
Q ss_pred hcCCCcEEEEcCccccCCCc----HhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceec
Q 007133 328 DLSNIDIVFHIGDITYANGY----ISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFY 403 (617)
Q Consensus 328 ~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~ 403 (617)
...++||||++||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... ... ......+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~~~----~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---INE----TEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---GTB----CSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---ccc----cccchhhhhhcc
Confidence 33489999999999998653 3579999999999888999999999999864210 000 001124556788
Q ss_pred cCCC---CCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCcc
Q 007133 404 VPAE---NRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFE 480 (617)
Q Consensus 404 ~P~~---~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~ 480 (617)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 2457899999999999999999877667899999999999987777899999999999 77643221121
Q ss_pred chhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceecc--CCcccccCCCCceEEEEECCCCCCCC---CCCCCCCC
Q 007133 481 EPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVN--TEKYHYTGTVNGTIHVVVGGGGSHLS---DFSEVTPN 555 (617)
Q Consensus 481 ~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~--~~~~~y~~~~~g~v~iv~G~gG~~l~---~~~~~~~~ 555 (617)
..+ |+.|+++|.+++||++|+||+|.|+|++|+++.+... .....+ .++++++||++|+||.... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 344 8899999999999999999999999999997654321 111111 2467999999999998642 34456789
Q ss_pred cceeeeCcceEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEecCCC
Q 007133 556 WSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGKV--YDSFTISRDYRD 601 (617)
Q Consensus 556 ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~v--~D~f~i~k~~~~ 601 (617)
|++|+...|||++|++.|+++|.++|+++.||++ .|+|+|.|++-.
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~ 418 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWY 418 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecccc
Confidence 9999999999999999999999999999999997 599999997543
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=5.3e-34 Score=317.65 Aligned_cols=380 Identities=18% Similarity=0.243 Sum_probs=233.9
Q ss_pred eEeecCC-CCcEEEEEEeCCCCC-------CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 178 RLAQGKS-WDEMTVTWTSGYDIS-------EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 178 ~La~~~~-~~~m~V~W~T~~~~~-------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
-++.|+- .+++ |.|+.-.+.. .....|+|....+..+.......+.... .+.+++|+|.
T Consensus 12 GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~------------~~~~~t~~v~ 78 (527)
T 2yeq_A 12 GVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK------------PSLAHSVHVE 78 (527)
T ss_dssp CEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC------------GGGTTEEEEE
T ss_pred cccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec------------CCCceEEEee
Confidence 3455664 5666 7798863210 1235777776655433211111111110 1246899999
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCC-CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQD-SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD 328 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (617)
|+||+|||+|+|||+.. ..+|++++|+|+|.++.. .++||+++||.+... +..+.+..|.+
T Consensus 79 v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~~~ia~- 140 (527)
T 2yeq_A 79 ADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAYKHMAK- 140 (527)
T ss_dssp ECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHHHHHTT-
T ss_pred cCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHHHHHHh-
Confidence 99999999999999874 246899999999987653 579999999987531 12356677765
Q ss_pred cCCCcEEEEcCccccCCCcH--------------------h----HHHHHH--HhhhhhhcCCCeEEcccCCCCCCCCCC
Q 007133 329 LSNIDIVFHIGDITYANGYI--------------------S----QWDQFT--AQVEPIASTVPYMIGSGNHERDWPNSG 382 (617)
Q Consensus 329 ~~~pDfvl~~GDi~Y~~g~~--------------------~----~wd~f~--~~i~~l~~~vP~~~v~GNHD~~~~~~g 382 (617)
.++|||||+||++|+++.. . .|.+++ ..++.+.+.+|+|+++||||+..+..+
T Consensus 141 -~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~ 219 (527)
T 2yeq_A 141 -EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYAN 219 (527)
T ss_dssp -SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBT
T ss_pred -cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCC
Confidence 6899999999999987532 1 222222 235677789999999999999743111
Q ss_pred CccCCCCCCCcc----Ccccccee-ccCC-------CCCCCeEEEEEeCC-EEEEEEeCCCCCC----------------
Q 007133 383 SFYDTTDSGGEC----GVPAETMF-YVPA-------ENRAKFWYSTDYGM-FHFCIADTEHDWR---------------- 433 (617)
Q Consensus 383 ~~y~~~ds~ge~----g~~~~~~f-~~P~-------~~~~~~yYsfd~G~-v~fi~LDt~~~~~---------------- 433 (617)
.........+.. ...++.+| .||. ....+.||+|++|+ ++||+|||+....
T Consensus 220 ~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~ 299 (527)
T 2yeq_A 220 KIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESR 299 (527)
T ss_dssp TBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHH
T ss_pred CcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccccccccc
Confidence 100000000000 00122223 3442 12357899999999 9999999976321
Q ss_pred ------CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCC-----CCCc-cchhhHHHHHHHHHHcCCc--E
Q 007133 434 ------EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQ-----EGSF-EEPMGRESLQRLWQKYKVD--I 499 (617)
Q Consensus 434 ------~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~-----~g~~-~~~~~r~~l~~Ll~k~~Vd--l 499 (617)
.+.+|++||+++|++ ++++|+||+.|+|+ ++.....+. ...+ .-...|+.|+++|.+++|+ +
T Consensus 300 ~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~v 375 (527)
T 2yeq_A 300 NPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVV 375 (527)
T ss_dssp CTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEE
T ss_pred CCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEE
Confidence 368999999999998 67899999999999 765321110 0000 0122389999999999995 9
Q ss_pred EEecCcccceeeccccCceeccCCcccccCCCCceEEEEECC--C--CCCCCCCCC---CCCCcceeeeCcceEEEEEEe
Q 007133 500 AFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGG--G--GSHLSDFSE---VTPNWSLYRDYDWGFVKLTAF 572 (617)
Q Consensus 500 vlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~--g--G~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~ 572 (617)
+|+||+|.++++....+.. ... ....++-+++++- + |..+..... ...++..|.+...||++|++
T Consensus 376 vLsGDvH~~~~~~~~~~~~---~p~----~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy~~v~v- 447 (527)
T 2yeq_A 376 VLTGDVHASWASNLHVDFE---KTS----SKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTV- 447 (527)
T ss_dssp EEECSSSSEEEEEEESSTT---CTT----SCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEEEEEEE-
T ss_pred EEEcchHHHhHhhcccccc---CCC----CCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCEEEEEE-
Confidence 9999999999986322110 000 0001333332222 1 111100000 01223345567899999999
Q ss_pred cCCeEEEEEEEC-----CCCc--EEEEEEEEecCCC
Q 007133 573 NHSSLLFEYKKS-----CDGK--VYDSFTISRDYRD 601 (617)
Q Consensus 573 ~~~~L~~~~~~~-----~dG~--v~D~f~i~k~~~~ 601 (617)
++++++++|+.. .++. ..-+|++....+.
T Consensus 448 t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~~~ 483 (527)
T 2yeq_A 448 TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQTG 483 (527)
T ss_dssp ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSSTTC
T ss_pred eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCCcC
Confidence 789999999852 2332 4555666554333
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.4e-35 Score=309.03 Aligned_cols=265 Identities=18% Similarity=0.251 Sum_probs=186.9
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCc----HhHHHHHHHhh-hhh--hc
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGY----ISQWDQFTAQV-EPI--AS 363 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i-~~l--~~ 363 (617)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++.+ +.. ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997531 112222344444443 789999999999998 53 34565444333 322 34
Q ss_pred CCCeEEcccCCCCCCCCCC--C----ccCCCC----CCCccCccccceeccCCCCCCCeEEEE----Ee---------C-
Q 007133 364 TVPYMIGSGNHERDWPNSG--S----FYDTTD----SGGECGVPAETMFYVPAENRAKFWYST----DY---------G- 419 (617)
Q Consensus 364 ~vP~~~v~GNHD~~~~~~g--~----~y~~~d----s~ge~g~~~~~~f~~P~~~~~~~yYsf----d~---------G- 419 (617)
.+|+++++||||+...... . .|...+ ...........||.||. .||+| +. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998632100 0 010000 00001123457899984 46765 32 3
Q ss_pred ---CEEEEEEeCCCCCC----------CCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHH
Q 007133 420 ---MFHFCIADTEHDWR----------EGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRE 486 (617)
Q Consensus 420 ---~v~fi~LDt~~~~~----------~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~ 486 (617)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+ |+++.+ +.. ..+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~~~----~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-RGS----SYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-CCC----HHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-CCc----HHH-HH
Confidence 39999999974321 125899999999943 489999999999 887532 211 234 88
Q ss_pred HHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceE
Q 007133 487 SLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGF 566 (617)
Q Consensus 487 ~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 566 (617)
.|++||.+|+|+++|+||+|.|+|+++ +|++||++|+||....... ..++|+.|+...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~~-~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKSG-MKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCCS-SCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccCC-CCCCcceeecCCCcE
Confidence 999999999999999999999999863 4689999999987654221 346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEecCCCc
Q 007133 567 VKLTAFNHSSLLFEYKKSCDGKVYDSFTISRDYRDV 602 (617)
Q Consensus 567 ~~l~v~~~~~L~~~~~~~~dG~v~D~f~i~k~~~~~ 602 (617)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+..
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~~ 311 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKKT 311 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCSS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCcc
Confidence 99999 788999999966999999999999977654
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.96 E-value=1.2e-29 Score=262.33 Aligned_cols=263 Identities=21% Similarity=0.268 Sum_probs=175.1
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHH-HHHHhhhhhh-----cC
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWD-QFTAQVEPIA-----ST 364 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~-----~~ 364 (617)
.+||+++||+|......... ..+......+.+++++ .+|||||++||++|.+|....++ +|.+.++.+. ..
T Consensus 6 ~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 82 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 82 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred ceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcC
Confidence 49999999999865321000 0000112233333333 58999999999998765322111 3344444322 27
Q ss_pred CCeEEcccCCCCCCCCCCC-ccCCCCCCCccCccccceeccCCCCCCCeEEEEEe------CCEEEEEEeCCCCC-----
Q 007133 365 VPYMIGSGNHERDWPNSGS-FYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDY------GMFHFCIADTEHDW----- 432 (617)
Q Consensus 365 vP~~~v~GNHD~~~~~~g~-~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~------G~v~fi~LDt~~~~----- 432 (617)
+|+++++||||+....... -|. ....+|.+| ..||++++ ++++||+||+....
T Consensus 83 ~p~~~v~GNHD~~~~~~~~~~~~----------~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~ 147 (313)
T 1ute_A 83 VPWHVLAGNHDHLGNVSAQIAYS----------KISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDD 147 (313)
T ss_dssp CCEEECCCHHHHHSCHHHHHHGG----------GTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGG
T ss_pred CCEEEECCCCccCCCcccccccc----------ccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCcc
Confidence 9999999999985311000 010 012345555 34788888 58999999986410
Q ss_pred ------------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEE
Q 007133 433 ------------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIA 500 (617)
Q Consensus 433 ------------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdlv 500 (617)
..+.+|++||++.|++. +.+|+|+++|+|+ ++.... +. ...+ ++.|.++|.+++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~-~~----~~~~-~~~l~~~l~~~~v~~~ 217 (313)
T 1ute_A 148 FVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH-GP----THCL-VKQLLPLLTTHKVTAY 217 (313)
T ss_dssp STTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS-CC----CHHH-HHHTHHHHHHTTCSEE
T ss_pred ccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC-CC----cHHH-HHHHHHHHHHcCCcEE
Confidence 12479999999999985 4589999999999 765431 11 1233 7889999999999999
Q ss_pred EecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCC---CCCCCcceeeeC----cceEEEEEEec
Q 007133 501 FFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFS---EVTPNWSLYRDY----DWGFVKLTAFN 573 (617)
Q Consensus 501 lsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v~~ 573 (617)
|+||+|.+++..+ .+|+.||++|++|....... ....++..|... .+||.+|++ +
T Consensus 218 l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~ 279 (313)
T 1ute_A 218 LCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-T 279 (313)
T ss_dssp EECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-C
T ss_pred EECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-E
Confidence 9999999998852 25788999999886432111 011234555433 389999999 7
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCC
Q 007133 574 HSSLLFEYKKSCDGKVYDSFTISRDYR 600 (617)
Q Consensus 574 ~~~L~~~~~~~~dG~v~D~f~i~k~~~ 600 (617)
++.++++|+. .+|+++|+|+|.|...
T Consensus 280 ~~~~~~~~~~-~~g~~~~~~~l~~~~~ 305 (313)
T 1ute_A 280 PKEMSVTYIE-ASGKSLFKTKLPRRAR 305 (313)
T ss_dssp SSCEEEEEEE-TTSCEEEEEEECCCC-
T ss_pred cCEEEEEEEc-CCCcEEEEEEeccccC
Confidence 7899999984 6999999999998753
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.88 E-value=9e-22 Score=205.37 Aligned_cols=249 Identities=16% Similarity=0.106 Sum_probs=161.4
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh----cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc--
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD----LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIAS-- 363 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~-- 363 (617)
..+||++++|+|....... .+.. ......++++++. ..++|+||++||+++. +....|+.+.+.++++..
T Consensus 24 ~~~ri~~iSD~H~~~~~~~-~~~~--~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRR-LYGA--VDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp CSEEEEEECCCCBCSSSCC-BTTT--BCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCccCCCCcc-cccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHHHHhhc
Confidence 4599999999998654211 1110 1123344554443 2589999999999954 445677777777777643
Q ss_pred CCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCC----CCCHHHH
Q 007133 364 TVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDW----REGSEQY 439 (617)
Q Consensus 364 ~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~----~~g~~Q~ 439 (617)
.+|+++++||||+.. .+ ...+.-........+|++++++++|++||+.... ....+|+
T Consensus 100 ~~pv~~v~GNHD~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~ 161 (330)
T 3ib7_A 100 GAELVWVMGNHDDRA----EL--------------RKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQL 161 (330)
T ss_dssp TCEEEECCCTTSCHH----HH--------------HHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHH
T ss_pred CCCEEEeCCCCCCHH----HH--------------HHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHH
Confidence 799999999999741 00 0111000111235679999999999999998632 2468999
Q ss_pred HHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCcee
Q 007133 440 RFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQC 519 (617)
Q Consensus 440 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~ 519 (617)
+||++.|+... +. .+|+++|||+ +....... ...... .++.+.+++.+++|+++|+||+|..+...
T Consensus 162 ~wl~~~l~~~~--~~-~~iv~~Hh~p-~~~~~~~~--~~~~~~-~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------- 227 (330)
T 3ib7_A 162 GWLAEELATPA--PD-GTILALHHPP-IPSVLDMA--VTVELR-DQAALGRVLRGTDVRAILAGHLHYSTNAT------- 227 (330)
T ss_dssp HHHHHHTTSCC--TT-CEEEECSSCS-SCCSSGGG--GGGSBS-CHHHHHHHHTTSSEEEEEECSSSSCEEEE-------
T ss_pred HHHHHHHHhcc--cC-CeEEEEECCC-CCCCcccc--cccccc-CHHHHHHHHhccCceEEEECCCCCcccce-------
Confidence 99999998853 22 3788888887 54321100 001111 26789999999999999999999987442
Q ss_pred ccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCc
Q 007133 520 VNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGK 588 (617)
Q Consensus 520 ~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~ 588 (617)
.+|..+++.|+.+....... ............||..|++ +++.+.++++.-..+.
T Consensus 228 -----------~~g~~~~~~gs~~~~~~~~~--~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 -----------FVGIPVSVASATCYTQDLTV--AAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp -----------ETTEEEEECCCSSCEECTTS--CTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred -----------ECCEEEEecCcceeccCCCC--CCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 24667777777664322111 1111222345679999999 6778899998644433
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.87 E-value=5.4e-21 Score=193.92 Aligned_cols=243 Identities=12% Similarity=0.085 Sum_probs=153.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc----CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL----SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 367 (617)
+||++++|+|...... ..+.. ......++++++.+ .++|+||++||+++. +....|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVNC-GRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS-CCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhc--CCCE
Confidence 4899999999875321 11100 11123445544432 368999999999964 4455677777777765 6899
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCcccccee-ccCCCCCCCeEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHH
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMF-YVPAENRAKFWYSTDYGMFHFCIADTEHDW----REGSEQYRFI 442 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f-~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~----~~g~~Q~~WL 442 (617)
++++||||..... ... +...| .++.+ .+..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~~-~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKALF-LEY-------------LQPLCPQLGSD-ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHHH-HHH-------------HGGGSGGGCSC-GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHHH-HHH-------------hhhhhcCcccC-CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 9999999974110 000 00001 11111 023578999999999999997532 2458999999
Q ss_pred HHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc-CCcEEEecCcccceeeccccCceecc
Q 007133 443 EQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYERTCPIYQNQCVN 521 (617)
Q Consensus 443 ~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~ 521 (617)
++.|++. +..++|+++|+|+ +....... +. .... .++.+.+++.++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~~~-~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IACE-NGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GSBT-TTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-ccCc-CHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999985 3456999999998 65432111 10 1011 256889999999 89999999999987652
Q ss_pred CCcccccCCCCceEEEEECCCCCCCCCCCCCCCCc-ceeeeCcceEEEEEEecCCeEEEEEEEC
Q 007133 522 TEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNW-SLYRDYDWGFVKLTAFNHSSLLFEYKKS 584 (617)
Q Consensus 522 ~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~~~~~L~~~~~~~ 584 (617)
.+|..++++++.+.... .. .+.+ +.+.....||..+++ +++.+.++++.-
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~~ 254 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHSL 254 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEec
Confidence 13444555544332211 11 1122 234456689999999 566898888763
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.86 E-value=4.2e-21 Score=198.58 Aligned_cols=250 Identities=16% Similarity=0.159 Sum_probs=150.9
Q ss_pred CceEEEEEeecCCCcCCCCccccc----CCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCc-----HhHHHHHHHhh
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN----YQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGY-----ISQWDQFTAQV 358 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~----~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~-----~~~wd~f~~~i 358 (617)
..+||++++|+|.........+.. +.......++++++.. .++|+||++||+++.... ...|+.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 359999999999876432111100 0011223445544432 689999999999975321 23334444444
Q ss_pred hhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEe-CCEEEEEEeCCCC------
Q 007133 359 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDY-GMFHFCIADTEHD------ 431 (617)
Q Consensus 359 ~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~fi~LDt~~~------ 431 (617)
+.+ .+|+++++||||...-....+........... .......+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRT-GTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCccccc-ccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 68999999999983110001111000000000 0000111332 2456899998 9999999999652
Q ss_pred -------------------C---------------------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCC
Q 007133 432 -------------------W---------------------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDY 471 (617)
Q Consensus 432 -------------------~---------------------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~ 471 (617)
| ....+|++||++.|++..+. ..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC-CCCCC
Confidence 0 12379999999999986432 346899999998 65432
Q ss_pred CCCCCCCccchhhHHHHHHHHHHc-CCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCC
Q 007133 472 WYGQEGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFS 550 (617)
Q Consensus 472 ~~~~~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~ 550 (617)
. .... .. .++.+.+++.++ +|+++|+||+|.+++... .+|+.+++.|+.-.
T Consensus 237 ~---~~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~------ 288 (322)
T 2nxf_A 237 D---PICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE------ 288 (322)
T ss_dssp C---GGGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG------
T ss_pred C---cccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh------
Confidence 1 0000 11 267899999999 799999999999988641 24666776655411
Q ss_pred CCCCCcceeeeCcceEEEEEEecCCeEEEEEEE
Q 007133 551 EVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKK 583 (617)
Q Consensus 551 ~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~ 583 (617)
. .....||..+++ +++.+.++.+.
T Consensus 289 --~------~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 289 --T------PPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp --C------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred --C------CCCCCcEEEEEE-ECCeEEEEecc
Confidence 0 123568999998 67788887764
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.72 E-value=4.2e-16 Score=169.85 Aligned_cols=216 Identities=13% Similarity=0.150 Sum_probs=126.5
Q ss_pred CCceEEEEEeecCCCcCCC---Cccccc---CCC-----CchhHHHHHHHh--cCCCcEEEEcCccccCCCcHhHHHHHH
Q 007133 289 DSLQRVVIFGDMGKAERDG---SNEYSN---YQP-----GSLNTTDQLIRD--LSNIDIVFHIGDITYANGYISQWDQFT 355 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~---~~~~~~---~~~-----~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~ 355 (617)
+..+||++++|+|...... ...+.. ... .....++++++. ..+||+||++||+++. +....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3459999999999864210 000000 000 013344555443 2579999999999964 3344566666
Q ss_pred Hhhhhhhc-CCCeEEcccCCCCCCCCCCCccCCCC-C-CCccC-ccccceeccCC-------CCCCCeEEEEEeCCEEEE
Q 007133 356 AQVEPIAS-TVPYMIGSGNHERDWPNSGSFYDTTD-S-GGECG-VPAETMFYVPA-------ENRAKFWYSTDYGMFHFC 424 (617)
Q Consensus 356 ~~i~~l~~-~vP~~~v~GNHD~~~~~~g~~y~~~d-s-~ge~g-~~~~~~f~~P~-------~~~~~~yYsfd~G~v~fi 424 (617)
+.++.+.. .+|+++++||||+....... +.... . ....+ ..+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 66666543 78999999999986321110 00000 0 00000 00111111000 001223445567899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHH
Q 007133 425 IADTEHD------------WREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLW 492 (617)
Q Consensus 425 ~LDt~~~------------~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll 492 (617)
+||+... .....+|++||++.|+..... ...+|+++|+|+ +....... ...... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~-~~~~~~~~--~~~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNL-TDHNDVIQ--KGYTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBS-SCSSCC----CCSBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCC-cccccccc--cccccc-cHHHHHHHH
Confidence 9999752 123579999999999886432 345899999998 55422111 111111 267899999
Q ss_pred HHcCCcEEEecCcccceee
Q 007133 493 QKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 493 ~k~~VdlvlsGH~H~YeRt 511 (617)
.+++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997654
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.46 E-value=1.8e-12 Score=127.08 Aligned_cols=172 Identities=10% Similarity=0.084 Sum_probs=98.9
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
.+||+++||+|.+. ..++++++.. .++|+|+++||+++.......+.++++.++.+ .+|++
T Consensus 5 ~mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEE
T ss_pred eEEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEE
Confidence 37999999999752 2234444332 38999999999996542444555666666543 68999
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCC-CCCCeEEEEEeC-CEEEEEEeCCC--CCCCC--------H
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAE-NRAKFWYSTDYG-MFHFCIADTEH--DWREG--------S 436 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~-~~~~~yYsfd~G-~v~fi~LDt~~--~~~~g--------~ 436 (617)
+++||||.... .++.. .+......|.. ...+ ..+.++ +++|+.++... .+... .
T Consensus 68 ~v~GNHD~~~~---~~~~~---------~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T 1uf3_A 68 YVPGPQDAPIW---EYLRE---------AANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 133 (228)
T ss_dssp EECCTTSCSHH---HHHHH---------HHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEH
T ss_pred EECCCCCchhH---HHHHh---------hhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchh
Confidence 99999997410 00000 00000000100 0001 124456 88898887431 11111 1
Q ss_pred HHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcc
Q 007133 437 EQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVH 506 (617)
Q Consensus 437 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 506 (617)
.+.+|+++.|++.. ..+.|++.|+|+ +..... ..+.+.+..++.+++++++++||+|
T Consensus 134 ~~~~~~~~~l~~~~---~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 134 WVAEYRLKALWELK---DYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHHGGGGGSC---SCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hhHHHHHHHHHhCC---CCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 22344455555532 235899999998 543110 1113467788888999999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.37 E-value=8.2e-12 Score=125.44 Aligned_cols=183 Identities=11% Similarity=0.103 Sum_probs=95.2
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhH---------------H----
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQ---------------W---- 351 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~---------------w---- 351 (617)
.+||+++||+|.+.. .+..+.+.++. .++|+|+++||+++....... +
T Consensus 5 ~mri~~iSDlH~~~~------------~~~~~l~~~~~-~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD------------LLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CCEEEEEECCTTCGG------------GHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred eEEEEEEeecCCChH------------HHHHHHHHHHh-cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHH
Confidence 379999999997531 12222222222 589999999999964322100 0
Q ss_pred ----HHHHHhhhhhhc-CCCeEEcccCCCCCCCCC-CCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEE
Q 007133 352 ----DQFTAQVEPIAS-TVPYMIGSGNHERDWPNS-GSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCI 425 (617)
Q Consensus 352 ----d~f~~~i~~l~~-~vP~~~v~GNHD~~~~~~-g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~ 425 (617)
+.+.+.++.+.. .+|+++++||||...... ...+.. .+. +.....+ .+. ..+++++++|+.
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~------~~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEA------ETA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHT------TTT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhhh------ccC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122233333333 689999999999742000 000000 000 0000001 111 236788999999
Q ss_pred EeCCCCC-CCCHHHH----HHHH----HHHHhcccCCCCEEEEEecccCccCC-CCCCCCCCCccchhhHHHHHHHHHHc
Q 007133 426 ADTEHDW-REGSEQY----RFIE----QCLASVDRRKQPWLIFAAHRVLGYSS-DYWYGQEGSFEEPMGRESLQRLWQKY 495 (617)
Q Consensus 426 LDt~~~~-~~g~~Q~----~WL~----~~L~~~~r~~~pw~Iv~~H~P~~yss-~~~~~~~g~~~~~~~r~~l~~Ll~k~ 495 (617)
++..... ....+|. .|+. +.|++. .+ ...|++.|+|+ +.. ........ ...+.+.+..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~-~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL--KP-RRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS--CC-CEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc--CC-CCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9753210 0011222 1433 333332 12 34689999998 543 11100000 011245778888899
Q ss_pred CCcEEEecCcc
Q 007133 496 KVDIAFFGHVH 506 (617)
Q Consensus 496 ~VdlvlsGH~H 506 (617)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
No 12
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.25 E-value=6.1e-10 Score=107.34 Aligned_cols=180 Identities=15% Similarity=0.192 Sum_probs=110.2
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
+||+++||+|.+... ......+.+++++ .++|+|+++||++. .+.++.++.+ ..|++.++
T Consensus 11 m~i~~iSD~H~~~~~---------~~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v~ 70 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRC---------NSLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 70 (192)
T ss_dssp CEEEEECCCCBTTTC---------SSCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred eEEEEEecCCCCccc---------hhHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEEc
Confidence 799999999975321 0112333333332 56999999999983 1223334433 35899999
Q ss_pred cCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhccc
Q 007133 372 GNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDR 451 (617)
Q Consensus 372 GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r 451 (617)
||||... .+|. ...++.
T Consensus 71 GNhD~~~------------------------~lp~------~~~~~~--------------------------------- 87 (192)
T 1z2w_A 71 GDFDENL------------------------NYPE------QKVVTV--------------------------------- 87 (192)
T ss_dssp CTTCCCT------------------------TSCS------EEEEEE---------------------------------
T ss_pred CCcCccc------------------------cCCc------ceEEEE---------------------------------
Confidence 9999741 0121 111111
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCCC
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTV 531 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 531 (617)
..++|++.|.++ +.. +. ..+.+..++.+.++|++++||+|...... .
T Consensus 88 --~~~~i~l~Hg~~-~~~--~~----------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------~ 134 (192)
T 1z2w_A 88 --GQFKIGLIHGHQ-VIP--WG----------DMASLALLQRQFDVDILISGHTHKFEAFE------------------H 134 (192)
T ss_dssp --TTEEEEEECSCC-CCB--TT----------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred --CCEEEEEECCCc-CCC--CC----------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------E
Confidence 135788888554 322 10 14467777888899999999999854321 1
Q ss_pred CceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007133 532 NGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGK-VYDSFTISR 597 (617)
Q Consensus 532 ~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~-v~D~f~i~k 597 (617)
+++.++-.|+.+....+. . .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 135 ~~~~~inpGS~~~~~~~~-------~--~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 135 ENKFYINPGSATGAYNAL-------E--TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp TTEEEEECCCTTCCCCSS-------C--SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEECCcccccCCCC-------C--cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 466777777766532110 0 123468999998 5678999888755554 466666655
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.25 E-value=2.2e-10 Score=112.69 Aligned_cols=190 Identities=19% Similarity=0.238 Sum_probs=111.9
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEc
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIG 370 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v 370 (617)
..|+++++|+|.+... ......+.++++. .++|+|+++||++. .+.++.++.+ ..|++.+
T Consensus 25 ~m~i~~iSD~H~~~~~---------~~l~~~l~~~~~~-~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGA---------KELPSNFRELLAT-DKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTC---------SSCCGGGHHHHHC-TTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCCh---------HHHHHHHHHHHhc-CCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 4799999999975321 0112345555543 67999999999994 2233444443 3689999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcc
Q 007133 371 SGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVD 450 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~ 450 (617)
+||||..... +. ..+. ..+|. ... .
T Consensus 85 ~GNHD~~~~~----~~---------~~~~--~~lp~------~~~---------------------------------~- 109 (215)
T 2a22_A 85 SGDLDSAIFN----PD---------PESN--GVFPE------YVV---------------------------------V- 109 (215)
T ss_dssp CCTTCCSCCB----CC---------GGGT--BCCCS------EEE---------------------------------E-
T ss_pred cCCCcCcccc----cC---------hhhH--hhCCc------eEE---------------------------------E-
Confidence 9999975210 00 0000 00010 000 0
Q ss_pred cCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCC
Q 007133 451 RRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGT 530 (617)
Q Consensus 451 r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 530 (617)
....++|++.|.++ +.. + . ..+.+..++.+.++|++++||+|......
T Consensus 110 -~~~~~~i~l~Hg~~-~~~--~---~-------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~------------------ 157 (215)
T 2a22_A 110 -QIGEFKIGLMHGNQ-VLP--W---D-------DPGSLEQWQRRLDCDILVTGHTHKLRVFE------------------ 157 (215)
T ss_dssp -EETTEEEEEECSTT-SSS--T---T-------CHHHHHHHHHHHTCSEEEECSSCCCEEEE------------------
T ss_pred -ecCCeEEEEEcCCc-cCC--C---C-------CHHHHHHHHhhcCCCEEEECCcCCCccEe------------------
Confidence 01234788889654 321 1 0 14567778888899999999999854321
Q ss_pred CCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007133 531 VNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGK-VYDSFTISR 597 (617)
Q Consensus 531 ~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~-v~D~f~i~k 597 (617)
.+++.++-.|+.+....+.. .....+|..+++ ++..+.++++.-.+|+ .+.+..+.|
T Consensus 158 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 KNGKLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ETTEEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred eCCEEEEECCcccccCCCCC---------CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 14567777777665321110 123468999998 5678889888755565 355555443
No 14
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.25 E-value=2.1e-11 Score=128.00 Aligned_cols=258 Identities=10% Similarity=0.048 Sum_probs=124.4
Q ss_pred ceEEEEEeecCCCcCCCCcccccCC--CCchhHHHHHHHh--cCCCcEEEEcCc-cccCCCcH--hHHHHHHHhhhhhhc
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQ--PGSLNTTDQLIRD--LSNIDIVFHIGD-ITYANGYI--SQWDQFTAQVEPIAS 363 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~pDfvl~~GD-i~Y~~g~~--~~wd~f~~~i~~l~~ 363 (617)
.+||++++|+|.+.... ..+.... ......++++++. ..++|+|+++|| ++ +.+.. .....+.+.++.+..
T Consensus 18 ~mrilh~SD~HlG~~~~-~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSW-TSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp EEEEEEEECCCBTCEEC-TTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECcccCCCCcc-ccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHHh
Confidence 49999999999762100 0000000 0012345555543 257999999999 66 44332 223445555555543
Q ss_pred CCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCC-------CCCH
Q 007133 364 TVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDW-------REGS 436 (617)
Q Consensus 364 ~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~-------~~g~ 436 (617)
.+|+++++||||... . ..+... -...+ ..+.+-.+......+.++.+++.|+.++..... ....
T Consensus 96 ~~pv~~i~GNHD~~~--~-~~~~~~--l~~~g----~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~ 166 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG--L-KLFGNF--VTSIS----SDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFR 166 (336)
T ss_dssp HSCEEECCC--------C-HHHHHH--HHHHC----SSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHHH
T ss_pred cCCEEEECCCCCccc--c-ccHHHH--HHhcC----CEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHH
Confidence 389999999999753 1 100000 00000 001111110000001122356888888643221 1124
Q ss_pred HHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccC
Q 007133 437 EQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQ 516 (617)
Q Consensus 437 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~ 516 (617)
+|.+|+.+.|+..-+....+.|+++|.|+ +..... ..+...... .+...+.+.++|++++||+|..+... .
T Consensus 167 ~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~~----~v~~~l~~~~~d~v~~GH~H~~~~~~---~ 237 (336)
T 2q8u_A 167 FFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGREI----IINRALIPSVVDYAALGHIHSFREIQ---K 237 (336)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CCC----EECGGGSCTTSSEEEEESCSSCEEEE---E
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhhc----ccCHHHccccCCEEEEccccCceEeC---C
Confidence 67889888886521023457999999998 543110 000000000 01112335689999999999987652 0
Q ss_pred ceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007133 517 NQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGKVYDSFTI 595 (617)
Q Consensus 517 ~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~v~D~f~i 595 (617)
.+..+.+|+... ..++.. ...-||..|++.++....++++.-.. +.+-++.+
T Consensus 238 ----------------~~~i~y~GS~~~---------~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~~~~ 289 (336)
T 2q8u_A 238 ----------------QPLTIYPGSLIR---------IDFGEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKTLYY 289 (336)
T ss_dssp ----------------TTEEEECCCSSC---------CSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEEEEE
T ss_pred ----------------CccEEECCCCcC---------CCcccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEEeec
Confidence 111122333211 111111 12468999998544457888886444 66666665
No 15
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.22 E-value=4.2e-10 Score=106.91 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=107.2
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC-CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS-NIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIG 370 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v 370 (617)
.|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999842 234566665543 79999999998431 2333332 89999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhcc
Q 007133 371 SGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVD 450 (617)
Q Consensus 371 ~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~ 450 (617)
+||||... .+|. ...++.
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~~-------------------------------- 75 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTEL-------------------------------- 75 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEEE--------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEEE--------------------------------
Confidence 99999641 0121 000110
Q ss_pred cCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCcccccCC
Q 007133 451 RRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGT 530 (617)
Q Consensus 451 r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 530 (617)
..++|++.|.|+ +... .+ .+.+..++.+++++++++||+|......
T Consensus 76 ---~~~~i~~~Hg~~-~~~~-----~~-------~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 76 ---GSTKIIQTHGHL-FDIN-----FN-------FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp ---TTEEEEEECSGG-GTTT-----TC-------SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred ---CCeEEEEECCCc-cCCC-----CC-------HHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 124788999987 5421 01 3467778888999999999999864321
Q ss_pred CCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007133 531 VNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKKSCDGKVYDSFTI 595 (617)
Q Consensus 531 ~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~~~dG~v~D~f~i 595 (617)
.+++.++-.|+.|..... ....+|..+++ ++..+.++++ .-+|+++.++++
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 135677778877653210 11358899998 6678999987 567887775443
No 16
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.15 E-value=1.5e-10 Score=115.95 Aligned_cols=210 Identities=8% Similarity=0.003 Sum_probs=109.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc-----C--CCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL-----S--NIDIVFHIGDITYANGYISQWDQFTAQVEPIAST 364 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 364 (617)
.|++++||+|... ..++++++.. . ++|+|+++||++....... +..+.+..+...
T Consensus 2 m~i~~isD~H~~~---------------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~ 63 (252)
T 1nnw_A 2 VYVAVLANIAGNL---------------PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKK 63 (252)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHH
T ss_pred cEEEEEeecCCCH---------------HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhh
Confidence 5899999998532 2233333322 2 7999999999995433222 233344443333
Q ss_pred CCeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007133 365 VPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDW---REGSEQYRF 441 (617)
Q Consensus 365 vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~---~~g~~Q~~W 441 (617)
.|+++++||||...... .. .++ .+... .. +++.... ... ..+ ....+|.+|
T Consensus 64 ~~~~~v~GNhD~~~~~~---~~------~~~-~~~~~--~~----------~~~~~~~---~~~-~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 64 ENVKIIRGKYDQIIAMS---DP------HAT-DPGYI--DK----------LELPGHV---KKA-LKFTWEKLGHEGREY 117 (252)
T ss_dssp SCEEEECCHHHHHHHHS---CT------TCS-SSGGG--GG----------SSCCHHH---HHH-HHHHHHHHHHHHHHH
T ss_pred cCeeEEecchHHHhhcc---cc------ccC-Ccccc--cc----------hhhhHHH---HHH-HHHHHHHCCHHHHHH
Confidence 68999999999642100 00 000 00000 00 0000000 000 000 113578888
Q ss_pred HHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHc-CCcEEEecCcccceeeccccCceec
Q 007133 442 IEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKY-KVDIAFFGHVHNYERTCPIYQNQCV 520 (617)
Q Consensus 442 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~ 520 (617)
|++.............|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------- 183 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------- 183 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------
T ss_pred HHhCCceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe--------
Confidence 876332221111224688888876 33211000 0 111146788888888 99999999999854331
Q ss_pred cCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEE
Q 007133 521 NTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYK 582 (617)
Q Consensus 521 ~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~ 582 (617)
.+++++|..|+.|..... +...+|..+++ ++..+.+..+
T Consensus 184 ----------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ----------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ----------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ----------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 136777888887754210 12357788776 4445554443
No 17
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.14 E-value=5e-10 Score=114.97 Aligned_cols=208 Identities=15% Similarity=0.115 Sum_probs=110.0
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
..+||++++|+|.... . + +..++|+||++||+++. |...+++.+.+.++.+ ...|+++
T Consensus 58 ~~mri~~iSD~H~~~~------------~---l-----~i~~~D~vi~aGDl~~~-g~~~e~~~~~~~L~~l-~~~~v~~ 115 (296)
T 3rl5_A 58 GHTRFVCISDTRSRTD------------G---I-----QMPYGDILLHTGDFTEL-GLPSEVKKFNDWLGNL-PYEYKIV 115 (296)
T ss_dssp TEEEEEEEBCCTTCCT------------T---C-----CCCSCSEEEECSCCSSS-CCHHHHHHHHHHHHTS-CCSEEEE
T ss_pred CCeEEEEEeeCCCCcc------------h---h-----ccCCCCEEEECCcccCC-CCHHHHHHHHHHHHhC-CCCeEEE
Confidence 4489999999997531 0 1 23679999999999954 4455566666666654 2346899
Q ss_pred cccCCCCCCCCCCCccCCCCCC--Ccc----Cccc---cceeccCCCC--CCCeEEEEEeCCEEEEEEeCCCCCCCC---
Q 007133 370 GSGNHERDWPNSGSFYDTTDSG--GEC----GVPA---ETMFYVPAEN--RAKFWYSTDYGMFHFCIADTEHDWREG--- 435 (617)
Q Consensus 370 v~GNHD~~~~~~g~~y~~~ds~--ge~----g~~~---~~~f~~P~~~--~~~~yYsfd~G~v~fi~LDt~~~~~~g--- 435 (617)
++||||+.... .++...... ... ..+. ...-.++.+. ..+ -+.++++++|+...-...+.+.
T Consensus 116 V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f~ 191 (296)
T 3rl5_A 116 IAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGFN 191 (296)
T ss_dssp CCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTTB
T ss_pred EcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCCC
Confidence 99999985321 111000000 000 0000 0000011100 011 2356788999884422211111
Q ss_pred HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHH-HHcCCcEEEecCcccceeeccc
Q 007133 436 SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLW-QKYKVDIAFFGHVHNYERTCPI 514 (617)
Q Consensus 436 ~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll-~k~~VdlvlsGH~H~YeRt~p~ 514 (617)
.++.+++.+.+... .....|++.|.|+ |......... ....+.+.|...+ ++++++++++||+|......
T Consensus 192 ~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~-- 262 (296)
T 3rl5_A 192 LPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM-- 262 (296)
T ss_dssp CCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE--
T ss_pred cchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE--
Confidence 12223443334333 1233689999998 6642211000 0122345666666 68999999999999843221
Q ss_pred cCceeccCCcccccCCCCceEEEEECCCCCCCC
Q 007133 515 YQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLS 547 (617)
Q Consensus 515 ~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~ 547 (617)
..+++++|-.|+-|....
T Consensus 263 ---------------~~g~t~vvNpGs~~~~~~ 280 (296)
T 3rl5_A 263 ---------------TDGYTTYINASTCTVSFQ 280 (296)
T ss_dssp ---------------ECSSCEEEECBCSCTTSC
T ss_pred ---------------EECCEEEEECCcCCcCcC
Confidence 124567777777766543
No 18
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.96 E-value=6.3e-09 Score=111.29 Aligned_cols=84 Identities=19% Similarity=0.189 Sum_probs=54.1
Q ss_pred CceEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCc-HhHHHHHHHhhhhhhc-
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGY-ISQWDQFTAQVEPIAS- 363 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l~~- 363 (617)
..+||++++|+|.+... +.. -.......++++++. ..++|+||++||+++.... ...+..+.+.++.+..
T Consensus 19 ~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~ 94 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN 94 (386)
T ss_dssp CCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 45899999999986420 000 000011345555543 2689999999999865422 2344556666666654
Q ss_pred CCCeEEcccCCCCC
Q 007133 364 TVPYMIGSGNHERD 377 (617)
Q Consensus 364 ~vP~~~v~GNHD~~ 377 (617)
.+|+++++||||..
T Consensus 95 ~~pv~~v~GNHD~~ 108 (386)
T 3av0_A 95 NIKVYIVAGNHEMP 108 (386)
T ss_dssp TCEEEECCCGGGSC
T ss_pred CCcEEEEcCCCCCC
Confidence 58999999999975
No 19
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.95 E-value=2.8e-09 Score=113.81 Aligned_cols=197 Identities=14% Similarity=0.202 Sum_probs=100.8
Q ss_pred eEEEEEeecCCCcCCCCcccccCC--CCchhHHHHHHHh--cCCCcEEEEcCccccCCC--cHhHHHHHHHhhhhhhcCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQ--PGSLNTTDQLIRD--LSNIDIVFHIGDITYANG--YISQWDQFTAQVEPIASTV 365 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~~~v 365 (617)
+||++++|+|.+...... ..... ......++++++. ..++|+||++||++++.+ ....+..+.+.++.+...+
T Consensus 1 mrilh~SD~Hlg~~~~~~-~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTS-SRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTA 79 (379)
T ss_dssp CEEEEECCCCBTCEECSS-SSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEcccCCCCCcccc-ccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCC
Confidence 489999999987531000 00000 0012344554432 258999999999994322 2334455556666554349
Q ss_pred CeEEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCC----CCCCeEEEEE--eC-CEEEEEEeCCCCCC----C
Q 007133 366 PYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAE----NRAKFWYSTD--YG-MFHFCIADTEHDWR----E 434 (617)
Q Consensus 366 P~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~----~~~~~yYsfd--~G-~v~fi~LDt~~~~~----~ 434 (617)
|+++++||||.... ..+.. . ...++.+ ..... +.+. .| .+.|+.+.-..... .
T Consensus 80 ~v~~i~GNHD~~~~---~~~~~---------~---~~~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~ 143 (379)
T 3tho_B 80 PVVVLPGNQDWKGL---KLFGN---------F---VTSISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALRKN 143 (379)
T ss_dssp CEEECCCTTSCTTH---HHHHH---------H---HHTTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----CH
T ss_pred CEEEEcCCCccccC---ccccc---------c---ccccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhhhh
Confidence 99999999995310 00000 0 0000100 00011 2222 23 46777765322111 1
Q ss_pred CHHHHHHHHHHHHhc---ccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceee
Q 007133 435 GSEQYRFIEQCLASV---DRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERT 511 (617)
Q Consensus 435 g~~Q~~WL~~~L~~~---~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 511 (617)
+.++.+|+.+.|+.. ......+.|+++|.++ .......+.+.... ..+...+...++|+++.||.|..+..
T Consensus 144 ~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 144 EGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 356789999988721 1124567899999987 33211001110000 01111222468999999999998654
No 20
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.91 E-value=6.4e-09 Score=104.09 Aligned_cols=151 Identities=17% Similarity=0.255 Sum_probs=86.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
+|++++||+|.. ...++++++...++|.++++||++....... +..+.+..+. +++.++
T Consensus 4 mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~~---~~~~~l~~~~---~~~~v~ 62 (246)
T 3rqz_A 4 MRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGYGPRPR---ECVELVRVLA---PNISVI 62 (246)
T ss_dssp CCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSSSSCHH---HHHHHHHHHC---SSEECC
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCCCCCHH---HHHHHHHhcC---CCEEEe
Confidence 789999999843 2456667766568999999999995433222 2333333331 268999
Q ss_pred cCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHhccc
Q 007133 372 GNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDR 451 (617)
Q Consensus 372 GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~~~r 451 (617)
||||...... +... .+. +.......|. ......+|.+||++.......
T Consensus 63 GNhD~~~~~~---~~~~------------~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~~ 110 (246)
T 3rqz_A 63 GNHDWACIGR---LSLD------------EFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMID 110 (246)
T ss_dssp CHHHHHHTCC---CCCC--------------C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEEE
T ss_pred CchHHHHhcc---CCcc------------ccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEEE
Confidence 9999752110 0000 000 0000000000 011346889999864433221
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccc
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNY 508 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 508 (617)
. .|++.|.++ .+... ... .. ...+..+|.+++++++|+||+|.-
T Consensus 111 --~--~i~~~Hg~p-~~~~~-----~~~-~~--~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 111 --G--DWTVVHGSP-RHPIW-----EYI-YN--ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp --T--TEEEESSCS-SSTTT-----CCC-CS--HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred --C--CEEEEECCc-CCccc-----ccc-CC--hHHHHHHHhccCCCEEEECCcCcc
Confidence 1 467788776 43210 111 11 457788899999999999999973
No 21
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=98.88 E-value=1.4e-08 Score=103.26 Aligned_cols=216 Identities=13% Similarity=0.135 Sum_probs=114.2
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
..|++++||+|.+ ...++++++.. .++|.|+++||++...... .+..+.++.+ .|++
T Consensus 11 ~~~i~~iSDiHg~---------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGN---------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCC---------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEE
Confidence 3899999999853 23344444432 4799999999999543321 3344444433 3789
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHHh
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLAS 448 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~~ 448 (617)
++.||||...... .. +.++.. .|. ..+.+ .. +. ........+|.+||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~~-----~~~~~~------~~~----~~~~~-~~-------~~-~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---VR-----KELDST------RPS----QRYLL-RQ-------CQ-YVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---HT-----TCSCTT------SHH----HHHHH-HH-------HH-HHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---hc-----cccCCC------cHH----HHHHH-HH-------HH-HHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 00 000000 000 00000 00 00 00012346889998864333
Q ss_pred cccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccceeeccccCceeccCCccccc
Q 007133 449 VDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYT 528 (617)
Q Consensus 449 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 528 (617)
....-....|++.|..+ .+.... . -..... .+.+..++.+.++|++|+||+|.-....
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~~~~-~---~~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKNWGR-E---LIHTGK-QEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBSSSS-T---TSTTCC-HHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCCCCc-e---ecCCCc-HHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111234677888765 322100 0 000111 4577888888899999999999633221
Q ss_pred CCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCCeEEEEEEE
Q 007133 529 GTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYKK 583 (617)
Q Consensus 529 ~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~~L~~~~~~ 583 (617)
..++..+|-.|+.|.+....+ .. . .+..-.|+.|++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~--~--~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QL--R--KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TG--G--GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--cc--c--CCCCCEEEEEEecCCCceEEEEEE
Confidence 014677888999887543211 00 0 012357889988433335677764
No 22
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.83 E-value=1e-07 Score=91.64 Aligned_cols=61 Identities=20% Similarity=0.333 Sum_probs=43.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+|++++||+|.. ...++++++.. .++|+|+++||++.. +.++.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 799999999842 12344444432 689999999999842 234444433 579999
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.70 E-value=2.3e-07 Score=88.36 Aligned_cols=64 Identities=16% Similarity=0.164 Sum_probs=41.2
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEEcc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIGS 371 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 371 (617)
.|++++||+|.... . ......++++. .++|+|+++||+++. +..+.++.+ ..|++.++
T Consensus 23 mri~~iSD~Hg~~~-----~----~~l~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----M----ASLPDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----T----CCCCHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----H----HHHHHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0 11112333322 579999999999841 233344433 36999999
Q ss_pred cCCCCC
Q 007133 372 GNHERD 377 (617)
Q Consensus 372 GNHD~~ 377 (617)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999964
No 24
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.63 E-value=3.3e-07 Score=95.85 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=52.1
Q ss_pred eEEEEEeecCCCcCCCCcccccC--CCCchhHHHHHHHh--cCCCcEEEEcCccccCCC-cHhHHHHHHHhhhhhhc-CC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNY--QPGSLNTTDQLIRD--LSNIDIVFHIGDITYANG-YISQWDQFTAQVEPIAS-TV 365 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~--~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~~-~v 365 (617)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 489999999987421 0000 00011234444432 268999999999996532 22345566666666654 68
Q ss_pred CeEEcccCCCCC
Q 007133 366 PYMIGSGNHERD 377 (617)
Q Consensus 366 P~~~v~GNHD~~ 377 (617)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999975
No 25
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.63 E-value=1.9e-08 Score=97.01 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=82.4
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHH---Hh-cCCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLI---RD-LSNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~---~~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 367 (617)
+|+++++|+|.+.... .....+. ......+.++ ++ ..++|+|+++||+++.. ..+.+..+.++.+ ..|+
T Consensus 2 ~~i~~iSD~H~~~~~~-~~~~~~~-~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~ 74 (195)
T 1xm7_A 2 AMMYFISDTHFYHENI-INLNPEV-RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRK 74 (195)
T ss_dssp CCEEEEBCCCBTCTTH-HHHSTTT-CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEE
T ss_pred cEEEEEeccccCCCcc-ccccCCC-CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCE
Confidence 5799999999753210 0000010 0112233333 32 25799999999999653 1222334444443 3489
Q ss_pred EEcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHH
Q 007133 368 MIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLA 447 (617)
Q Consensus 368 ~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LDt~~~~~~g~~Q~~WL~~~L~ 447 (617)
+.++||||.... . +... |-+ +. +..||+
T Consensus 75 ~~v~GNhD~~~~---~--------------~~~~-----------~~~----------l~----------~~~~l~---- 102 (195)
T 1xm7_A 75 ILVMGNHDKDKE---S--------------LKEY-----------FDE----------IY----------DFYKII---- 102 (195)
T ss_dssp EEECCTTCCCHH---H--------------HTTT-----------CSE----------EE----------SSEEEE----
T ss_pred EEEeCCCCCchh---h--------------hhhh-----------hhc----------hh----------HHHHHH----
Confidence 999999997410 0 0000 100 00 111221
Q ss_pred hcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCccccee
Q 007133 448 SVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYER 510 (617)
Q Consensus 448 ~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 510 (617)
+. ..++|++.|.|+ +..... .+ ....+.+..++.+++++++|+||+|....
T Consensus 103 ~~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 103 EH----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EE----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred hc----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 11 135799999997 543211 11 12267888999999999999999998653
No 26
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.55 E-value=4.7e-06 Score=89.39 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=51.9
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCc-HhHHHHHHHhhhh-----
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGY-ISQWDQFTAQVEP----- 360 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~----- 360 (617)
...+||++++|+|.+....... ........++++++. ..++|+|+++||+++.... ......+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 3459999999999875321100 001122344555443 2689999999999965432 1222334444332
Q ss_pred -------h----------------------hcCCCeEEcccCCCCC
Q 007133 361 -------I----------------------ASTVPYMIGSGNHERD 377 (617)
Q Consensus 361 -------l----------------------~~~vP~~~v~GNHD~~ 377 (617)
+ ...+|++++.||||..
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~ 133 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 133 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCc
Confidence 2 1379999999999975
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.55 E-value=1.3e-06 Score=94.07 Aligned_cols=87 Identities=14% Similarity=0.196 Sum_probs=54.3
Q ss_pred CCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCc-HhHHHHHHHhhhhh---
Q 007133 288 QDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGY-ISQWDQFTAQVEPI--- 361 (617)
Q Consensus 288 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l--- 361 (617)
....+||++++|+|.+....... ........++++++. ..++|+||++||+++.... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999875421100 001112344555432 2689999999999965432 23344455555432
Q ss_pred -------------------------------hcCCCeEEcccCCCCC
Q 007133 362 -------------------------------ASTVPYMIGSGNHERD 377 (617)
Q Consensus 362 -------------------------------~~~vP~~~v~GNHD~~ 377 (617)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.53 E-value=6.1e-06 Score=89.38 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=52.5
Q ss_pred CCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh--cCCCcEEEEcCccccCCCcH-hHHHHHHHhhhh-----
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD--LSNIDIVFHIGDITYANGYI-SQWDQFTAQVEP----- 360 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~----- 360 (617)
...+||++++|+|.+....... ........++++++. ..++|+||++||+++..... .....+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4459999999999875321100 001122344555443 26899999999999654322 222334443332
Q ss_pred -------h----------------------hcCCCeEEcccCCCCC
Q 007133 361 -------I----------------------ASTVPYMIGSGNHERD 377 (617)
Q Consensus 361 -------l----------------------~~~vP~~~v~GNHD~~ 377 (617)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999975
No 29
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.14 E-value=1.2e-05 Score=89.05 Aligned_cols=196 Identities=16% Similarity=0.108 Sum_probs=90.9
Q ss_pred ceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHh----c--CCC-cEEEEcCccccCCCcHhH---HHHHHHhhhh
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRD----L--SNI-DIVFHIGDITYANGYISQ---WDQFTAQVEP 360 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~----~--~~p-Dfvl~~GDi~Y~~g~~~~---wd~f~~~i~~ 360 (617)
.++|+.++|+|....... . .......+..++++ . .++ ++++.+||++.... ... .+...+.+..
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~---~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~-~~~~~~~~~~~~~ln~ 81 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--Y---GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVP-ESDLQDAEPDFRGMNL 81 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--T---SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCH-HHHTTTTHHHHHHHHH
T ss_pred EEEEEEecccccCccCCC--C---CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcc-hhhhcCCcHHHHHHhc
Confidence 489999999997532100 0 01112233333332 1 135 79999999984322 111 1223333333
Q ss_pred hhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccc-eeccCCCC--CCCeEEEEEeCC--EEEEEEeCCCC--CC
Q 007133 361 IASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAET-MFYVPAEN--RAKFWYSTDYGM--FHFCIADTEHD--WR 433 (617)
Q Consensus 361 l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~-~f~~P~~~--~~~~yYsfd~G~--v~fi~LDt~~~--~~ 433 (617)
+ .. -++++||||+++... .+... ..+.+.++.. .......+ ..+.|.-++.++ +-|+.+.+... +.
T Consensus 82 l--g~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 154 (516)
T 1hp1_A 82 V--GY-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIG 154 (516)
T ss_dssp H--TC-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSS
T ss_pred c--CC-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCccccc
Confidence 3 23 367899999964210 00000 0000111100 00000000 013355677887 55677765431 11
Q ss_pred -C----------CHH-HHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEE
Q 007133 434 -E----------GSE-QYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAF 501 (617)
Q Consensus 434 -~----------g~~-Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdlvl 501 (617)
+ ..+ -.+|+++ |++. .+...+|++.|.|. ..... .+.. . .. ...+...+...+||++|
T Consensus 155 ~p~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~-~~~~--~--~~-~~~la~~~~~~~iDlil 224 (516)
T 1hp1_A 155 NPEYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE-HGSN--A--PG-DVEMARALPAGSLAMIV 224 (516)
T ss_dssp SCCSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC-CTTS--C--CC-HHHHHHHSCTTSSSEEE
T ss_pred CcCccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc-cccc--C--ch-HHHHHHhCCCCceeEEE
Confidence 1 012 2234433 4321 24577999999997 33211 1100 0 11 22344334445699999
Q ss_pred ecCcccce
Q 007133 502 FGHVHNYE 509 (617)
Q Consensus 502 sGH~H~Ye 509 (617)
+||.|...
T Consensus 225 gGHtH~~~ 232 (516)
T 1hp1_A 225 GGHSQDPV 232 (516)
T ss_dssp CCSSCCBC
T ss_pred CCCCCccc
Confidence 99999854
No 30
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.12 E-value=1.3e-05 Score=89.43 Aligned_cols=187 Identities=13% Similarity=0.037 Sum_probs=91.3
Q ss_pred CceEEEEEeecCCCcCCCCccccc-CC---CCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHh--HHHHHHHhhhh
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN-YQ---PGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYIS--QWDQFTAQVEP 360 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~-~~---~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~--~wd~f~~~i~~ 360 (617)
..++|+.++|+|..-... .|.. -. .+....+..++++. .++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 349999999999642110 0100 00 01233444444431 3577 8899999995432211 11122233332
Q ss_pred hhcCCCeEEcccCCCCCCCCCC--CccCCCCCCCccCccccc-eeccCCC----CCCCeEEEEEeCC--EEEEEEeCCCC
Q 007133 361 IASTVPYMIGSGNHERDWPNSG--SFYDTTDSGGECGVPAET-MFYVPAE----NRAKFWYSTDYGM--FHFCIADTEHD 431 (617)
Q Consensus 361 l~~~vP~~~v~GNHD~~~~~~g--~~y~~~ds~ge~g~~~~~-~f~~P~~----~~~~~yYsfd~G~--v~fi~LDt~~~ 431 (617)
+ . +-+.++||||+++.... .++. +++.++.. ....... ...+.|..++.++ +-|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~~l~~~l~------~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~ 176 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPGPLADFLK------GARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT 176 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHHHHHHHHT------TCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTH
T ss_pred c--C-CCccccccccccCCHHHHHHHHh------hCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccch
Confidence 2 2 33678999999742100 0110 11111110 0000000 0123466778887 55677766431
Q ss_pred --CC-C--------CHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcE
Q 007133 432 --WR-E--------GSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDI 499 (617)
Q Consensus 432 --~~-~--------g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~Vdl 499 (617)
+. + ..++.+.+.+.|++ .+...+|++.|.|. .. . ..+..+ .+||+
T Consensus 177 ~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~~----------------d---~~la~~~~gvDl 233 (552)
T 2z1a_A 177 REISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-GE----------------D---LKLARRLVGVQV 233 (552)
T ss_dssp HHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-HH----------------H---HHHHTTCSSCCE
T ss_pred hhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-ch----------------H---HHHHHhCCCccE
Confidence 01 1 12333333344543 34566999999885 10 0 112223 58999
Q ss_pred EEecCccccee
Q 007133 500 AFFGHVHNYER 510 (617)
Q Consensus 500 vlsGH~H~YeR 510 (617)
+|+||.|....
T Consensus 234 IlgGHtH~~~~ 244 (552)
T 2z1a_A 234 IVGGHSHTLLG 244 (552)
T ss_dssp EEECSSCCCBS
T ss_pred EEeCCcCcccc
Confidence 99999999654
No 31
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.02 E-value=0.00016 Score=80.31 Aligned_cols=201 Identities=14% Similarity=0.162 Sum_probs=92.6
Q ss_pred CceEEEEEeecCCCcCCCCccccc---CCCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHhHH--------HHHH
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN---YQPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYISQW--------DQFT 355 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~~w--------d~f~ 355 (617)
..++|+.++|+|..-... .|.. -..+....+..++++. .+++ +++.+||++.... ...+ ....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 349999999999643210 0100 0122344455555432 3455 7788999995432 2111 1222
Q ss_pred HhhhhhhcCCCeEEcccCCCCCCCCCC--CccCCCCCCCccCcccc--ceec--cCCCCCCCeEEEEEeCC--EEEEEEe
Q 007133 356 AQVEPIASTVPYMIGSGNHERDWPNSG--SFYDTTDSGGECGVPAE--TMFY--VPAENRAKFWYSTDYGM--FHFCIAD 427 (617)
Q Consensus 356 ~~i~~l~~~vP~~~v~GNHD~~~~~~g--~~y~~~ds~ge~g~~~~--~~f~--~P~~~~~~~yYsfd~G~--v~fi~LD 427 (617)
+.+..+ ... ++++||||+++...+ .+++ ++..++. .... -|. ..+.|.-++.++ +-||.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~--~~~py~i~e~~G~kIgviG~~ 163 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTL--TDNGVKYFQVGDQTVGVIGLT 163 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEES--SSCSEEEEEETTEEEEEEEEE
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCc--cCCCEEEEEECCEEEEEEEec
Confidence 222222 333 567999998742100 0000 0000110 0000 010 012366677887 4566776
Q ss_pred CCCC--CCC-----C---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCC-C-ccchhhHHHHHHHHHHc
Q 007133 428 TEHD--WRE-----G---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEG-S-FEEPMGRESLQRLWQKY 495 (617)
Q Consensus 428 t~~~--~~~-----g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g-~-~~~~~~r~~l~~Ll~k~ 495 (617)
+... +.. + ....+.+++.+++.. .+...+|++.|.+...... .+... . ..+.. ...+..-+ ..
T Consensus 164 ~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~--~~~~~~~~~~e~~-~~~la~~~-~~ 238 (527)
T 3qfk_A 164 TQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLE--SGTPTEVLTGENE-GYAMLEAF-SK 238 (527)
T ss_dssp CTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTT--TCCBSSCCSSSCC-HHHHHHHH-GG
T ss_pred cCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccc--cCccccccccchH-HHHHHHhc-CC
Confidence 6431 111 0 123344444444433 3466799999987521110 00000 0 01111 11222222 25
Q ss_pred CCcEEEecCcccce
Q 007133 496 KVDIAFFGHVHNYE 509 (617)
Q Consensus 496 ~VdlvlsGH~H~Ye 509 (617)
+||++|+||.|...
T Consensus 239 giDlIlgGHtH~~~ 252 (527)
T 3qfk_A 239 DIDIFITGHQHRQI 252 (527)
T ss_dssp GCSEEECCSSCCEE
T ss_pred CCcEEEECCCCccc
Confidence 89999999999854
No 32
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.90 E-value=0.00012 Score=81.54 Aligned_cols=190 Identities=10% Similarity=0.057 Sum_probs=92.3
Q ss_pred CceEEEEEeecCCCcCCCCccccc-------CCCCchhHHHHHHHhc--CCC-cEEEEcCccccCCCcHhH--HHHHHHh
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSN-------YQPGSLNTTDQLIRDL--SNI-DIVFHIGDITYANGYISQ--WDQFTAQ 357 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~--~~p-Dfvl~~GDi~Y~~g~~~~--wd~f~~~ 357 (617)
..++|+.++|+|..-... .|.. -..+....+..++++. .++ ++++.+||++........ .....+.
T Consensus 24 ~~l~Il~~nD~Hg~~~~~--~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQT--SEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp EEEEEEEECCCTTCCSCB--CTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred eEEEEEEecccccCCccc--ccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHH
Confidence 458999999999643210 0000 0012234444444431 234 699999999964322111 1222333
Q ss_pred hhhhhcCCCeEEcccCCCCCCCCC--C-CccCCCCCCCccCccccc--eec----cCC-CCCCCeEEEEEeCCEE--EEE
Q 007133 358 VEPIASTVPYMIGSGNHERDWPNS--G-SFYDTTDSGGECGVPAET--MFY----VPA-ENRAKFWYSTDYGMFH--FCI 425 (617)
Q Consensus 358 i~~l~~~vP~~~v~GNHD~~~~~~--g-~~y~~~ds~ge~g~~~~~--~f~----~P~-~~~~~~yYsfd~G~v~--fi~ 425 (617)
+..+ ... ++++||||+++... . .++. ++..++.. ... -|. ....+.|.-++.++++ ||.
T Consensus 102 ln~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG 172 (546)
T 4h2g_A 102 MNAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 172 (546)
T ss_dssp HHHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEE
T ss_pred HHhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEE
Confidence 3332 333 56799999874210 0 1211 11112110 000 000 0012346667888755 566
Q ss_pred EeCCCC--C-CCC-----HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCC
Q 007133 426 ADTEHD--W-REG-----SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKV 497 (617)
Q Consensus 426 LDt~~~--~-~~g-----~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~V 497 (617)
+.+... + .++ .+..+.+++.+++........+|++.|.+. . . ...+...+ .+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~-~--------------~--d~~la~~~--~gi 233 (546)
T 4h2g_A 173 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGF-E--------------M--DKLIAQKV--RGV 233 (546)
T ss_dssp EECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCH-H--------------H--HHHHHHHS--TTC
T ss_pred ecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCc-c--------------c--hHHHHHhC--CCC
Confidence 655321 0 111 122344444444433234667999999875 1 0 11222211 479
Q ss_pred cEEEecCcccce
Q 007133 498 DIAFFGHVHNYE 509 (617)
Q Consensus 498 dlvlsGH~H~Ye 509 (617)
|++|+||.|...
T Consensus 234 DlIlgGHtH~~~ 245 (546)
T 4h2g_A 234 DVVVGGHSNTFL 245 (546)
T ss_dssp CEEECCSSCCCC
T ss_pred cEEEeCCcCccc
Confidence 999999999854
No 33
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.84 E-value=0.00018 Score=71.77 Aligned_cols=169 Identities=17% Similarity=0.241 Sum_probs=85.4
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccC-CCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYA-NGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~-~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
.|++++||.=.. ++ ...++.++++. +. |+++..|..+.. .+.. ....+.+.. ..+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~--~G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLRE--AGVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHH--HTCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHh--CCCCEE
Confidence 479999998321 11 23344443331 34 898888776643 3332 122222222 244554
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccCCCCCCCeEEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHH
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIAD--TEHDWREGSEQYRFIEQCL 446 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~fi~LD--t~~~~~~g~~Q~~WL~~~L 446 (617)
+.||||++..+.-.|.+... +. .--++|.....+.|.-++.++.++-+++ .......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~-------~v-rpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP-------VV-RPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS-------EE-CCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC-------ce-EeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 67999998531111111000 00 0011232222456777888886655544 4322211122234466666
Q ss_pred HhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccc
Q 007133 447 ASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNY 508 (617)
Q Consensus 447 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 508 (617)
++.. .+.+|+.+|.-. ++ + .+.+.. +..-+||+++.||+|..
T Consensus 133 ~~lk---~d~IIv~~H~g~--ts-----------e---k~~la~-~~dg~Vd~VvGgHTHv~ 174 (252)
T 2z06_A 133 EEEK---ADYVLVEVHAEA--TS-----------E---KMALAH-YLDGRASAVLGTHTHVP 174 (252)
T ss_dssp HHCC---CSEEEEEEECSC--HH-----------H---HHHHHH-HHBTTBSEEEEESSCSC
T ss_pred HHhC---CCEEEEEeCCCc--HH-----------H---HHHHHH-hCCCCeEEEEcCCCCcC
Confidence 6652 778999999531 11 1 122222 23457999999999984
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=97.84 E-value=3.2e-05 Score=86.80 Aligned_cols=193 Identities=13% Similarity=0.094 Sum_probs=89.8
Q ss_pred CCceEEEEEeecCCCcCCCCcccc--c----CCCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHh--HHHHHHHh
Q 007133 289 DSLQRVVIFGDMGKAERDGSNEYS--N----YQPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYIS--QWDQFTAQ 357 (617)
Q Consensus 289 ~~~~rf~v~GD~g~~~~~~~~~~~--~----~~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~--~wd~f~~~ 357 (617)
...++|+.++|+|..-......|. . ...+....+..++++. .+++ ++|..||++....... ......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 0 0011233444444431 2344 8999999996432111 11222223
Q ss_pred hhhhhcCCCeEEcccCCCCCCCCC--CCccCCCCCCCccCcccc--ceeccCCC---CCCCeEEEEEeCCE--EEEEEeC
Q 007133 358 VEPIASTVPYMIGSGNHERDWPNS--GSFYDTTDSGGECGVPAE--TMFYVPAE---NRAKFWYSTDYGMF--HFCIADT 428 (617)
Q Consensus 358 i~~l~~~vP~~~v~GNHD~~~~~~--g~~y~~~ds~ge~g~~~~--~~f~~P~~---~~~~~yYsfd~G~v--~fi~LDt 428 (617)
|..+ ..- ++++||||+++... ..+++ +++.|+. ....-... ..-+.|.-++.+++ -||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 233 46799999874210 00111 1111110 00000000 01124566778874 5667754
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcE
Q 007133 429 -EH-----DWREG---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDI 499 (617)
Q Consensus 429 -~~-----~~~~g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~Vdl 499 (617)
.. ....+ .+..+-+++.+++........+|++.|.+. . . ...+...+ .+||+
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~--~-------------~--d~~la~~~--~giDl 221 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS--E-------------K--NIEIAQKV--NDIDV 221 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH--H-------------H--HHHHHHHC--SSCCE
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc--h-------------h--hHHHHHhC--CCCCE
Confidence 11 00011 122344555554443344667999999774 0 0 11222111 47999
Q ss_pred EEecCcccce
Q 007133 500 AFFGHVHNYE 509 (617)
Q Consensus 500 vlsGH~H~Ye 509 (617)
+|.||.|...
T Consensus 222 IlgGHtH~~~ 231 (579)
T 3ztv_A 222 IVTGDSHYLY 231 (579)
T ss_dssp EEECSSCCEE
T ss_pred EEeCCCCccc
Confidence 9999999965
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.83 E-value=0.00012 Score=80.83 Aligned_cols=203 Identities=13% Similarity=0.103 Sum_probs=91.2
Q ss_pred ceEEEEEeecCCCcCCCCcccc---cCCCCchhHHHHHHHhc--CCCcEEEE-cCccccCCCcHhHH---HHHHHhhhhh
Q 007133 291 LQRVVIFGDMGKAERDGSNEYS---NYQPGSLNTTDQLIRDL--SNIDIVFH-IGDITYANGYISQW---DQFTAQVEPI 361 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~---~~~~~~~~~~~~l~~~~--~~pDfvl~-~GDi~Y~~g~~~~w---d~f~~~i~~l 361 (617)
.++|+.++|+|..-......|. .-..+....+..++++. .+++.+++ +||++... ....+ ....+.+..
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~- 83 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNT- 83 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTT-
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHh-
Confidence 4899999999964321100010 00112244455554431 35776655 99999532 11111 122222222
Q ss_pred hcCCCeEEcccCCCCCCCCC--CCccCCCCCCCccCcccc--ceeccCCCC-C-CCeEEEEEeCCE--EEEEEeCCC---
Q 007133 362 ASTVPYMIGSGNHERDWPNS--GSFYDTTDSGGECGVPAE--TMFYVPAEN-R-AKFWYSTDYGMF--HFCIADTEH--- 430 (617)
Q Consensus 362 ~~~vP~~~v~GNHD~~~~~~--g~~y~~~ds~ge~g~~~~--~~f~~P~~~-~-~~~yYsfd~G~v--~fi~LDt~~--- 430 (617)
--+-++++||||+++... ..++. +++.|+. ..+.-.... . .+.|.-++.+++ -||.+-+..
T Consensus 84 --lg~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~ 155 (509)
T 3ive_A 84 --MPFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFN 155 (509)
T ss_dssp --SCCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHH
T ss_pred --cCCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccc
Confidence 223466799999874210 00111 0111110 000000000 0 233566788874 556664321
Q ss_pred --CCC---CC---HHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEE
Q 007133 431 --DWR---EG---SEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAF 501 (617)
Q Consensus 431 --~~~---~g---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~Vdlvl 501 (617)
.+. .+ .+..+.+++.+++... +...+|++.|.++.+..... ......... . .-..+.++ .+||++|
T Consensus 156 ~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~-~-~d~~la~~~~giDlIl 230 (509)
T 3ive_A 156 DTVSAATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSM--GGTDVRRAL-D-KDIQTASQVKGLDILI 230 (509)
T ss_dssp HHSCGGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC-----CCCCCC-H-HHHHHHHHCSSCCEEE
T ss_pred cccccccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccc--ccccccccc-c-hHHHHHhcCCCCcEEE
Confidence 010 11 2334455555555432 37779999998752221110 000000001 1 11233333 4799999
Q ss_pred ecCcccc
Q 007133 502 FGHVHNY 508 (617)
Q Consensus 502 sGH~H~Y 508 (617)
.||.|..
T Consensus 231 gGHtH~~ 237 (509)
T 3ive_A 231 TGHAHVG 237 (509)
T ss_dssp EESSCCC
T ss_pred eCCcCcc
Confidence 9999973
No 36
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.75 E-value=0.00033 Score=70.12 Aligned_cols=172 Identities=13% Similarity=0.068 Sum_probs=85.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCC-CcHhHHHHHHHhhhhhhcCCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYAN-GYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
.|++++||.= +. + -...++.++++. +. |+++..|+.+... +... ...+.+..+ .+-.+
T Consensus 1 m~ilf~GDv~-g~-----------~-G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da~ 61 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------P-GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGCL 61 (255)
T ss_dssp CEEEEECCBB-HH-----------H-HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSEE
T ss_pred CEEEEEeccC-Ch-----------H-HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCEE
Confidence 4799999983 11 1 123444444432 23 9999998888543 3321 122222221 34444
Q ss_pred EcccCCCCCCCCCCCccCCCCCCCccCccccceeccC-CCCCCCeEEEEEeCCEE--EEEEeCCCCCCCCHHHHHHHHHH
Q 007133 369 IGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVP-AENRAKFWYSTDYGMFH--FCIADTEHDWREGSEQYRFIEQC 445 (617)
Q Consensus 369 ~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~~f~~P-~~~~~~~yYsfd~G~v~--fi~LDt~~~~~~g~~Q~~WL~~~ 445 (617)
++||||++....-.+.+.... .+.+ --++| ....++.|.-++.++++ ++.|-+......-..-.+-+++.
T Consensus 62 -TlGNHefD~~~l~~~l~~~~~-----~~~~-~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 62 -TLGNHAWHHKDIYPMLSEDTY-----PIVR-PLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp -ECCTTTTSSTTHHHHHHTTCS-----CEEC-CSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred -EeccccccCchHHHHHhhCCC-----cEEE-EeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 669999985311111110000 0000 00122 22224456678887754 45554543221222224445666
Q ss_pred HHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 446 LASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 446 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
+++. +.+.+|+.+|.-. ++ + .+.+.. ...-+||+++.||.|...
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 6654 5677999999421 10 1 122222 223469999999999843
No 37
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=97.71 E-value=0.00097 Score=74.48 Aligned_cols=144 Identities=11% Similarity=0.028 Sum_probs=70.7
Q ss_pred Cc-EEEEcCccccCCCcHhHH---HHHHHhhhhhhcCCCeEEcccCCCCCCCCCC--CccCCCCCCCccCccccc-eecc
Q 007133 332 ID-IVFHIGDITYANGYISQW---DQFTAQVEPIASTVPYMIGSGNHERDWPNSG--SFYDTTDSGGECGVPAET-MFYV 404 (617)
Q Consensus 332 pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g--~~y~~~ds~ge~g~~~~~-~f~~ 404 (617)
+| +++.+||++.... ...+ ....+.+..+ ..+++ + ||||++..... .+.+ +++.++.. ....
T Consensus 123 pd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~~l~~~l~------~~~~p~L~aNv~~ 191 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRERVEELLG------LFRGEFLSYNIVD 191 (562)
T ss_dssp CCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHHHHHHHHH------HCCSEECCSSCEE
T ss_pred CCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCHHHHHHHHH------hCCCCEEEEEEEe
Confidence 88 8999999996432 2222 2223333333 46665 6 99998631000 0000 00111100 0000
Q ss_pred CCCC--CCCeEEEEEeCC--EEEEEEeCCCC-------------CCCCHHHHHHHHHHHHhcccCCCCEEEEEecccCcc
Q 007133 405 PAEN--RAKFWYSTDYGM--FHFCIADTEHD-------------WREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGY 467 (617)
Q Consensus 405 P~~~--~~~~yYsfd~G~--v~fi~LDt~~~-------------~~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~y 467 (617)
...+ ..+.|.-++.++ +-||.+.+... +....++.+-+.+.|++ .+...+|++.|.|. .
T Consensus 192 ~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~-~ 267 (562)
T 2wdc_A 192 DLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGM-Q 267 (562)
T ss_dssp TTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCH-H
T ss_pred cCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCC-c
Confidence 0000 012355677777 55666655321 11122333222233443 35667999999885 1
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEEecCcccce
Q 007133 468 SSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAFFGHVHNYE 509 (617)
Q Consensus 468 ss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 509 (617)
. . ..+.++ .+||++|+||.|...
T Consensus 268 --------------~--d---~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 268 --------------L--D---AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp --------------H--H---HHHHTTSSSCCEEEECSSCCCC
T ss_pred --------------c--h---HHHHhcCCCCcEEEeCCCCCCC
Confidence 0 1 122333 589999999999853
No 38
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=97.60 E-value=9.9e-05 Score=71.68 Aligned_cols=83 Identities=10% Similarity=0.177 Sum_probs=45.3
Q ss_pred ccceeeEEEEcCCCCCCCCceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCc--
Q 007133 272 YVWSKIYSFRASPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGY-- 347 (617)
Q Consensus 272 ~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~-- 347 (617)
..|+....|.... -.|++++||+|... ..++++++.. .++|+|+++||+++....
T Consensus 12 ~~~~~~~~~~~~~------mmki~~iSD~H~~~---------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~ 70 (208)
T 1su1_A 12 DLGTENLYFQSNA------MMKLMFASDIHGSL---------------PATERVLELFAQSGAQWLVILGDVLNHGPRNA 70 (208)
T ss_dssp -------------------CCEEEEECCCTTBH---------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSC
T ss_pred ccCcccceecccc------cEEEEEEEcCCCCH---------------HHHHHHHHHHHhcCCCEEEECCCccccCcccc
Confidence 3566666664322 27999999998641 2344444432 479999999999964221
Q ss_pred -HhH--HHHHHHhhhhhhcCCCeEEcccCCCCC
Q 007133 348 -ISQ--WDQFTAQVEPIASTVPYMIGSGNHERD 377 (617)
Q Consensus 348 -~~~--wd~f~~~i~~l~~~vP~~~v~GNHD~~ 377 (617)
..+ -.+..+.++.+ ..|++.++||||..
T Consensus 71 ~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 71 LPEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CCTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred cccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 111 13444444443 25899999999974
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.55 E-value=0.00067 Score=68.81 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=88.0
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCCCcEEEEcCccccCC-CcHhHHHHHHHhhhhhhcCCCeEEc
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSNIDIVFHIGDITYAN-GYISQWDQFTAQVEPIASTVPYMIG 370 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~~~v 370 (617)
+|++++||.+... |. ......++++.++ .++|+++..||.+... +.. ....+.+..+ .+-. ++
T Consensus 5 m~ilf~GDv~G~~--G~-------~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~Da-~T 68 (281)
T 1t71_A 5 IKFIFLGDVYGKA--GR-------NIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVNY-IT 68 (281)
T ss_dssp CEEEEECEEBHHH--HH-------HHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCCE-EE
T ss_pred EEEEEECCcCChH--HH-------HHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCCE-EE
Confidence 7999999997331 00 0011234444443 2589999999998543 332 1222222221 3333 46
Q ss_pred ccCCCCCCC-CCCCccCCCCCCCccCccccceeccCCCC----CCCeEEEEEeCCEE--EEEEeCCCCCCC--CHHHHHH
Q 007133 371 SGNHERDWP-NSGSFYDTTDSGGECGVPAETMFYVPAEN----RAKFWYSTDYGMFH--FCIADTEHDWRE--GSEQYRF 441 (617)
Q Consensus 371 ~GNHD~~~~-~~g~~y~~~ds~ge~g~~~~~~f~~P~~~----~~~~yYsfd~G~v~--fi~LDt~~~~~~--g~~Q~~W 441 (617)
+||||++.. +.-.|.+. . . +.. .-++|... .++.|.-++.++++ +|.+-+...+.+ -..-.+-
T Consensus 69 lGNHefD~g~~~~~~l~~---~-~---~v~-~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~ 140 (281)
T 1t71_A 69 MGNHTWFQKLDLAVVINK---K-D---LVR-PLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKV 140 (281)
T ss_dssp CCTTTTCCGGGHHHHTTC---T-T---EEC-BSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHH
T ss_pred EccCcccCCccHHHHhhh---c-C---EEe-eccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHH
Confidence 799999853 10011110 0 0 000 00112111 23456678887754 555555431221 1222445
Q ss_pred HHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 442 IEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 442 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
+++.++ +.+.+.+||.+|.-. ++ + .+.+.. ...-+||+++.||+|...
T Consensus 141 a~~~v~---~~~~diIIv~~H~g~--t~-----------E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 141 LKELIL---KRDCDLHIVDFHAET--TS-----------E---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHT---TCCCSEEEEEEECSC--HH-----------H---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHh---hcCCCEEEEEeCCCc--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 555555 356788999999421 10 1 122222 223469999999999854
No 40
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=0.0016 Score=54.65 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=57.3
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCC-cceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDL-QMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
|.+|..+.+.. .+.++++|.|....+..-..-.|+|...... .+.... .......+
T Consensus 8 P~~P~~~~~~~-~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVTE-TTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEEE-EETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEEe-ccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 45666666533 2468999999976321112245666554322 111100 00112457
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
|++|+|++.|.|||......|...||+...++|.+.+
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 8999999999999988755566668888889987643
No 41
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.24 E-value=0.0025 Score=54.49 Aligned_cols=99 Identities=19% Similarity=0.190 Sum_probs=60.5
Q ss_pred CCCccceEeecC-CCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 172 KAPLYPRLAQGK-SWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 172 ~~P~~~~La~~~-~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
.+|..+.+.... +.++++|.|........ ..-.|+|...++..... -..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDD-WIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTT-SEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccc-eEEEEE-----------------CCCceEE
Confidence 456666664443 57899999987642110 12345665432211000 000111 1123457
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQ 288 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~ 288 (617)
+|++|+|++.|.+||......|...||+...|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999999876566667899999999876544
No 42
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.20 E-value=0.0011 Score=56.41 Aligned_cols=93 Identities=17% Similarity=0.226 Sum_probs=58.4
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCCC-cceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGDL-QMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|..|..|.+ ...+.++++|.|........ ..-.|+|...+.. .+.. .+. +..
T Consensus 7 ~P~~P~~p~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~-----------------~~~ 63 (109)
T 1x5x_A 7 GPSMPASPVL-TKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKP-----KYD-----------------GED 63 (109)
T ss_dssp CCCCCCCCEE-EEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEE-----EEE-----------------ESC
T ss_pred CCcCCCCCEE-EEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEE-----eEe-----------------CCc
Confidence 3566777776 34457899999987643111 1134566554321 1110 111 011
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...++++|+|++.|.|||......|...+|+...++|.+.
T Consensus 64 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 64 LAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp SEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 2457899999999999999875556666788888988764
No 43
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.18 E-value=0.001 Score=56.64 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=58.2
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+.+ ...+.++++|.|........ ..-.|+|...+..... ..... +-....
T Consensus 11 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~ 68 (111)
T 1x5l_A 11 PSQVVVIRQ-ERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTRA 68 (111)
T ss_dssp CCCCCCEEC-SCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSEE
T ss_pred CCCCceEEE-EEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCcee----EEEec-----------------CCCCEE
Confidence 444544444 23357899999977632111 1234566554321110 01111 112456
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQ 288 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~ 288 (617)
+|++|+|++.|.+||......|...||+...|+|++.++.
T Consensus 69 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 69 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 8899999999999998875556567899999999887653
No 44
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.14 E-value=0.0017 Score=55.53 Aligned_cols=93 Identities=18% Similarity=0.149 Sum_probs=56.3
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|..+++ ...+.+++.|.|.......-..-.|+|...+...... ... +-....+|
T Consensus 18 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQR----ITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBC----CEE------------------CSSSEEEE
T ss_pred CCCCccCEe-eeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceE----Eec------------------CCCcEEEE
Confidence 345555555 3345789999998764310112234444332211100 000 01135678
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
+||+|++.|.+||......|...||....|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999988765666678888999998654
No 45
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.13 E-value=0.0019 Score=56.88 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=57.9
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC------CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE------AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGF 244 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 244 (617)
|.+|..+++ ...+.+++.|+|........ ..-.|+|...+..... ..... ..
T Consensus 19 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~----~~~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQA-VALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK----YKSED-----------------TT 76 (123)
T ss_dssp SCCCEEEEE-EEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC----CCCEE-----------------ES
T ss_pred CCCCcceEE-EEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc----EEEEe-----------------CC
Confidence 346666665 33357999999986532110 0235677654321100 00000 01
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 24578999999999999998765456667999999999875
No 46
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=97.12 E-value=0.0041 Score=53.40 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=35.0
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
..++|++|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 357899999999999999887666667789999999987654
No 47
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.12 E-value=0.003 Score=70.37 Aligned_cols=85 Identities=20% Similarity=0.105 Sum_probs=42.2
Q ss_pred CceEEEEEeecCCCcCCCCc--ccccCCCCchhHHHHHHHh---cCCCc-EEEEcCccccCCCcHh----HHHHHHHhhh
Q 007133 290 SLQRVVIFGDMGKAERDGSN--EYSNYQPGSLNTTDQLIRD---LSNID-IVFHIGDITYANGYIS----QWDQFTAQVE 359 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~---~~~pD-fvl~~GDi~Y~~g~~~----~wd~f~~~i~ 359 (617)
..++|+.++|+|..-..... .|.. .-+....+...+++ ..+++ +++.+||++....... ......+.+.
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred eEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 45999999999975321100 0100 00112233333332 25677 5789999995422111 1111122222
Q ss_pred hhhcCCCeEEcccCCCCCC
Q 007133 360 PIASTVPYMIGSGNHERDW 378 (617)
Q Consensus 360 ~l~~~vP~~~v~GNHD~~~ 378 (617)
.+ ..- ++++||||++.
T Consensus 93 ~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 93 KQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TS--CCS-EECCCGGGSSS
T ss_pred hc--CCC-EEeecchhccc
Confidence 21 233 56889999974
No 48
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.08 E-value=0.014 Score=64.62 Aligned_cols=190 Identities=14% Similarity=0.103 Sum_probs=87.8
Q ss_pred eEEEEEeecCCCcCCCCc---ccccC--CCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHhHHHHHHHhhhhhhc
Q 007133 292 QRVVIFGDMGKAERDGSN---EYSNY--QPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYISQWDQFTAQVEPIAS 363 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~---~~~~~--~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~ 363 (617)
++|+.+.|+|..-..... ..... ..+.+..+..++++. .+++ ++|..||++....... +.+- +.+-.++.
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~-~~~g-~~~i~~mN 81 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFT-VYKG-AEVAHFMN 81 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHH-HHTT-HHHHHHHH
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHH-HhCC-hHHHHHHh
Confidence 789999999964221000 00000 011233444444431 2344 7788999996542211 1110 11112222
Q ss_pred CCCe-EEcccCCCCCCCCCCCccCCCCCCCccCcccc--ceecc-C---C-CCCCCeEEEEEeCCEE--EEEEeCCCC--
Q 007133 364 TVPY-MIGSGNHERDWPNSGSFYDTTDSGGECGVPAE--TMFYV-P---A-ENRAKFWYSTDYGMFH--FCIADTEHD-- 431 (617)
Q Consensus 364 ~vP~-~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~--~~f~~-P---~-~~~~~~yYsfd~G~v~--fi~LDt~~~-- 431 (617)
.+.| ..++||||+++... .+.+... .++..|+- +...- + . ...-..|.-++.++++ ||.+-+...
T Consensus 82 ~lgyDa~~lGNHEFd~G~~-~l~~~~~--~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~~~ 158 (530)
T 4h1s_A 82 ALRYDAMALGNHEFDNGVE-GLIEPLL--KEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPF 158 (530)
T ss_dssp HTTCCEEECCGGGGTTTTH-HHHTTTT--TTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred ccCCCEEEEchhhhccCHH-HHHHHHH--hhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccceee
Confidence 3333 56899999975211 0111110 11111210 11000 0 0 0112346677888854 566665431
Q ss_pred C---------CCCHHHHHHHHHHHHhcccCCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHH-cCCcEEE
Q 007133 432 W---------REGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQK-YKVDIAF 501 (617)
Q Consensus 432 ~---------~~g~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k-~~Vdlvl 501 (617)
+ ...-+..+...+.|++ .+..-+|++.|..+ . . . ..+.++ .+||++|
T Consensus 159 ~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~-------------~--d---~~la~~v~giD~Il 215 (530)
T 4h1s_A 159 LSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E-------------M--D---KLIAQKVRGVDVVV 215 (530)
T ss_dssp HSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H-------------H--H---HHHHHHSTTCCEEE
T ss_pred eccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h-------------H--H---HHHHhcCCCCCeec
Confidence 1 1112223333344544 45666999999653 0 0 1 112233 3799999
Q ss_pred ecCcccce
Q 007133 502 FGHVHNYE 509 (617)
Q Consensus 502 sGH~H~Ye 509 (617)
.||.|.+-
T Consensus 216 gGHsH~~~ 223 (530)
T 4h1s_A 216 GGHSNTFL 223 (530)
T ss_dssp CCSSCCCB
T ss_pred cCCcccee
Confidence 99999853
No 49
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.07 E-value=0.0019 Score=54.74 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=57.5
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCC---CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEA---APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
|.+|..+.+ ...+.+++.|.|...... .+ .-.|+|...+..... ..... +-...
T Consensus 8 P~~P~~l~~-~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~ 64 (108)
T 2djs_A 8 PSTVPIMHQ-VSATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMAR-----------------SQTNT 64 (108)
T ss_dssp CCCCSCCEE-EEECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEEE-----------------ESSSE
T ss_pred CCCCcceEE-EecCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEEe-----------------cCccE
Confidence 556666655 233578999999876321 11 123445443321110 00100 11245
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
++|+||+|++.|.+||......|...||+...|+|.+..
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 65 ARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 678999999999999998766676678888999998753
No 50
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.04 E-value=0.0013 Score=56.12 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=58.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+....+.++++|.|........ ..-.|+|...+...+... +. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-----YQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE-----EE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE-----Ee-----------------CCcE
Confidence 3567777776333356899999965422111 123456654333222110 11 1123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
..++++|+|+++|.|||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999998765666678888889887654
No 51
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.99 E-value=0.0045 Score=53.32 Aligned_cols=94 Identities=21% Similarity=0.120 Sum_probs=57.4
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCC-CCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGY-DISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~-~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
|.+|..+.+. ..+.++++|.|.... .... ..-.|+|...+...+.. ... ..+-...
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~~~ 76 (120)
T 1x5f_A 18 PSAPRDVVAS-LVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV------ENT--------------SHPGEMQ 76 (120)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE------EEC--------------SSTTCSE
T ss_pred CCCCCCcEEE-ecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceE------EEe--------------ccCCccE
Confidence 4455555552 335789999998764 2111 12356666543221110 000 0112345
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
++|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 77 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 77 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 68999999999999998875556667888889999754
No 52
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.97 E-value=0.0021 Score=54.57 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=56.7
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCC-C-CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDIS-E-AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+.+. ..+.+++.|.|....... . ..-.|+|...+... ...+. +.....
T Consensus 8 P~~P~~~~~~-~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~------~~~~~-----------------~~~~~~ 63 (106)
T 1x4x_A 8 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM------QICYC-----------------GPGLSY 63 (106)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC------CEEEE-----------------ESCSEE
T ss_pred cCCCCCCEEE-EcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce------EEEEe-----------------CCcceE
Confidence 4566666653 234689999998764310 0 11245554432111 01111 011246
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 64 ~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 78999999999999998765566678999999998653
No 53
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.95 E-value=0.0015 Score=56.69 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=57.7
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC------CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE------AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGF 244 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 244 (617)
|.+|..+++ ...+.+++.|+|.-...... ..-.|+|....... ....+. .+-
T Consensus 9 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEE-EEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEE-EEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 446666665 33357999999986532110 02346666521110 000100 112
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998875556677898889999765
No 54
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=96.92 E-value=0.028 Score=52.01 Aligned_cols=92 Identities=14% Similarity=-0.007 Sum_probs=50.7
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|..+.+ ...+.++++|.|.-..+ .-..-.|+|...++... ...... +-....+
T Consensus 94 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~----~~~~~~-----------------~~~~~~~ 150 (186)
T 1qr4_A 94 VVGSPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVPITGGTP----NVVTVD-----------------GSKTRTK 150 (186)
T ss_dssp CCCCCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEETTCCCC----EEEEEE-----------------TTCCEEE
T ss_pred CCCCCCccEE-EEeCCCEEEEEEECCCC-cccEEEEEEEeCCCCCc----eEEEcC-----------------CCcCEEE
Confidence 4667776665 33357999999986532 11234566765432111 011111 1224567
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
|+||+||+.|.++|......|. .-.....|+|.|.
T Consensus 151 i~~L~p~t~Y~~~V~A~~~~g~-s~p~~~~~~T~pd 185 (186)
T 1qr4_A 151 LVKLVPGVDYNVNIISVKGFEE-SEPISGILKTALD 185 (186)
T ss_dssp ECSCCSSCEEEEEEEEEETTEE-CCCEEEEEEC---
T ss_pred EcCCCCCCEEEEEEEEEcCCCc-CcCEEEEEEecCC
Confidence 8999999999999987532221 1123557777764
No 55
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.89 E-value=0.0013 Score=57.00 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=57.0
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|.+|..+.+....+.++++|.|........ ..-.|+|..... ..+... +. +..
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~~-----------------~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----YS-----------------GAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----EC-----------------SSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----Ee-----------------ccc
Confidence 3556777777533457899999986543100 123455554432 112110 00 112
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
...++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 24578999999999999998755555567877778886543
No 56
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=96.88 E-value=0.033 Score=52.70 Aligned_cols=133 Identities=9% Similarity=0.108 Sum_probs=72.0
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeC---CCCCcEEEEEcCcccc------cCCCCCccceEeecCCCCcEEEEEEeCCC
Q 007133 129 TGKATLNFRLINQRS--DFSFGLFSG---GLSNPKLVAVSNSITF------ANPKAPLYPRLAQGKSWDEMTVTWTSGYD 197 (617)
Q Consensus 129 ~g~~~~~~~l~n~r~--~~~f~~~~~---~~~~~~~~a~s~~~~~------~~~~~P~~~~La~~~~~~~m~V~W~T~~~ 197 (617)
.+.....+.+-+.+. .|.|++... |...+ -..+..+.. ..+.+|..+.+ ...+.++++|.|.....
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~--s~~s~~~~~~~~~~~~~~~~P~~~~~-~~~~~~sv~l~W~~p~~ 141 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE--SNTSAKFYLQPGAALDPMPVPELLEI-EEYSETAVVLHWSLASD 141 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEE--CCCCCCEECCCSTTSCCCCCCEECCC-BCCSSSCEEEEEECCTT
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCC--CCCcccEEeccCcCCCCCCCCcccEE-EEccCCeEEEEEeCCCc
Confidence 344566667766665 467766654 22210 000111111 12223544443 23347899999988631
Q ss_pred --CCC-CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCcc
Q 007133 198 --ISE-AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYV 273 (617)
Q Consensus 198 --~~~-~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~ 273 (617)
... ..-.|+|...+. ..+. ..+.. .......+|+||+|++.|.|||......|...
T Consensus 142 ~~~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 201 (214)
T 2ibg_A 142 ADEHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASE 201 (214)
T ss_dssp CCGGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCC
T ss_pred cCCCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCC
Confidence 001 123466665433 1111 01111 11122457899999999999999876666667
Q ss_pred ceeeEEEEcCC
Q 007133 274 WSKIYSFRASP 284 (617)
Q Consensus 274 ~S~~~~F~T~p 284 (617)
+|+...++|..
T Consensus 202 ~S~~~~~~T~~ 212 (214)
T 2ibg_A 202 FSALKQGRTQR 212 (214)
T ss_dssp CCCCEEEECCC
T ss_pred CcceEeeEecC
Confidence 88888999864
No 57
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.88 E-value=0.0007 Score=56.77 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=31.2
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
...|+||+|++.|.+||......|...||+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 34789999999999999887556666788888888876
No 58
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.85 E-value=0.0048 Score=52.69 Aligned_cols=41 Identities=34% Similarity=0.465 Sum_probs=35.2
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQ 288 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~ 288 (617)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999876666667899999999887554
No 59
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.84 E-value=0.0011 Score=57.04 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=57.1
Q ss_pred CCCccceEeec---CCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 172 KAPLYPRLAQG---KSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 172 ~~P~~~~La~~---~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
..|..|.+... .+.++++|.|........ ..-.|+|.......+.. .+. +...
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 65 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFRE-----VYV-----------------GKET 65 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEE-----EEE-----------------ESCS
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEE-----EEe-----------------CCcC
Confidence 44555554332 247999999987643110 12246665433222210 011 0112
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
..+|+||+|++.|.|||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35789999999999999887656666788889999987653
No 60
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=96.82 E-value=0.0085 Score=62.52 Aligned_cols=49 Identities=20% Similarity=0.070 Sum_probs=27.9
Q ss_pred CCCCEEEEEecccCccCCCCCCCCCCCccchhhHHHHHHHHHHcCCcEEEecCcccce
Q 007133 452 RKQPWLIFAAHRVLGYSSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYE 509 (617)
Q Consensus 452 ~~~pw~Iv~~H~P~~yss~~~~~~~g~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 509 (617)
.....+|++.|-.+ ..+.. . ...+.. ...|..-+ .+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~-~---~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ-S---SGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC-C---TTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc-c---cccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 45778999999875 22111 0 001111 12232222 589999999999853
No 61
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.81 E-value=0.0025 Score=56.28 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=57.1
Q ss_pred cCCCCCc-cceEeecCCCCcEEEEEEeCCCCCCCCC-EEEEeccCCCcceecccceEEeecccCCCCCccccccC--CCe
Q 007133 169 ANPKAPL-YPRLAQGKSWDEMTVTWTSGYDISEAAP-FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD--PGF 244 (617)
Q Consensus 169 ~~~~~P~-~~~La~~~~~~~m~V~W~T~~~~~~~~~-~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~--~g~ 244 (617)
.-|.+|. .+++. ..+.++++|.|..+... .... .|+|.......... . ++. ....|.. ...
T Consensus 14 ~~P~~P~~~~~~~-~~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~--~--------~~~---~~~~w~~~~~~~ 78 (127)
T 2dmk_A 14 TAPNPPSIREELC-TASHDTITVHWISDDEF-SISSYELQYTIFTGQANFI--S--------LYN---SVDSWMIVPNIK 78 (127)
T ss_dssp SSCCCCEEEEEEE-EEETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHH--H--------HHH---TGGGSEEEEEEC
T ss_pred CCCcCCCCCCEEE-eeeCCEEEEEECCCCCC-CccceEEEEEEeccccccc--c--------ccc---CCCCcEEeeccc
Confidence 3567777 66653 33478999999987531 1223 67776411100000 0 000 0001110 000
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
-...+++||+|+++|.|||......|. .+|....++|.+.
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQ 118 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSS
T ss_pred CCeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCC
Confidence 123478999999999999998765565 5677888998764
No 62
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.79 E-value=0.0022 Score=54.41 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=32.5
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
..++|+||+|+|.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356789999999999999877555666788899999987
No 63
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=96.78 E-value=0.018 Score=60.06 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=42.3
Q ss_pred ceEEEEEeecCCCcCCCCccccc--CCCCchhHHHHHHHhc--CCCc-EEEEcCccccCCCcHhHHHHHHH-------hh
Q 007133 291 LQRVVIFGDMGKAERDGSNEYSN--YQPGSLNTTDQLIRDL--SNID-IVFHIGDITYANGYISQWDQFTA-------QV 358 (617)
Q Consensus 291 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~~pD-fvl~~GDi~Y~~g~~~~wd~f~~-------~i 358 (617)
.++|+.++|+|..-.. ...+.+ ...+.+..+..++++. ..++ ++|..||++.... ...|-.+.. .+
T Consensus 8 ~l~Il~tnD~Hg~~~~-~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~-~~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMD-FDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSP-LGDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEECCCTTCCSS-EETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSH-HHHHHHHHCCCTTCCCHH
T ss_pred eEEEEEEeeCCCCccc-ccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCch-hHHhhhhcccccccchHH
Confidence 4899999999975321 000000 0122344444444431 3444 7789999995332 222211100 11
Q ss_pred hhhhcCCCe-EEcccCCCCCC
Q 007133 359 EPIASTVPY-MIGSGNHERDW 378 (617)
Q Consensus 359 ~~l~~~vP~-~~v~GNHD~~~ 378 (617)
-.++..+.+ +.++||||+++
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTT
T ss_pred HHHHHhcCCCEEecchhhhhc
Confidence 122233332 55789999974
No 64
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.77 E-value=0.005 Score=52.41 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=58.0
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+++. ..+.++++|.|.-...... ..-.|+|...++.... ....... .. ..+
T Consensus 8 P~~p~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRVT-RSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPS---SVRFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEEE-EEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTT---TSEEEEE---------------SS--SEE
T ss_pred CCCCCccEEE-ecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCc---eeEEEcc---------------CC--CEE
Confidence 4456666653 3347899999987632110 1234666554311100 0001110 11 266
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 88999999999999998765666678988999998754
No 65
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.76 E-value=0.0038 Score=53.46 Aligned_cols=91 Identities=19% Similarity=0.106 Sum_probs=56.7
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCC--CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDIS--EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+++. ..+.++++|.|....... -..-.|+|...+...+. .. . ......
T Consensus 18 P~~P~~l~~~-~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~----~~--~-----------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAY-AASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ----DV--D-----------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEE-EEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC----CE--E-----------------ECSSEE
T ss_pred CcCCCccEEE-ecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE----EE--e-----------------cCCceE
Confidence 4566666653 234789999998753211 11234666554332210 00 0 012356
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998875556667888888999764
No 66
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.0048 Score=53.25 Aligned_cols=95 Identities=19% Similarity=0.161 Sum_probs=56.6
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecC
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKN 252 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~g 252 (617)
+|..+++ ...+.++++|.|.......-..-.|+|...+..... ...... .+....++|+|
T Consensus 21 ~P~~l~~-~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGV-KVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA--ANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEE-EEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG--CEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEE-EEccCCEEEEEecCCCCCccceEEEEEEECCCcccC--cEEEEc-----------------CCCEeEEEECC
Confidence 4445554 233478999999876420011234666544321100 000111 11224568999
Q ss_pred CCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 253 LWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 253 L~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999887555666788888999976543
No 67
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.71 E-value=0.0069 Score=53.01 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=57.8
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+++.. .+.++++|+|........ ..-.|+|...+..... ...... .+.....
T Consensus 28 P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~ 87 (130)
T 1wfo_A 28 PGPPMGILFPE-VRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEVL-----------------APSARQY 87 (130)
T ss_dssp CCCCCCCEEEE-ECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEEE-----------------CTTCCEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEEe-----------------CCCceEE
Confidence 45666666533 357899999987632110 1234556544321100 000000 1234567
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+|++|+|++.|.+||......|...+|+...|+|.+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 88 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 8899999999999999876566667888888998764
No 68
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.70 E-value=0.0042 Score=54.21 Aligned_cols=83 Identities=18% Similarity=0.133 Sum_probs=49.0
Q ss_pred CCCCcEEEEEEeCCCCCCC--CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEE
Q 007133 183 KSWDEMTVTWTSGYDISEA--APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYT 260 (617)
Q Consensus 183 ~~~~~m~V~W~T~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~ 260 (617)
.+.++++|.|..+.+.... .-.|+|..++...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 4579999999865321111 13677876543222110 000 1112346799999999999
Q ss_pred EEEeeecCCCCccceeeEEEEcCCCC
Q 007133 261 YRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 261 Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
+||......|...-| ...|+|.+.+
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~~ 103 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPKP 103 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCCC
Confidence 999876444443323 4678887654
No 69
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.68 E-value=0.011 Score=50.00 Aligned_cols=91 Identities=23% Similarity=0.275 Sum_probs=56.4
Q ss_pred CCCCccceEeec-CCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 171 PKAPLYPRLAQG-KSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 171 ~~~P~~~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
|.+|..+.+... .+.++++|+|.-...... ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 456666655433 357899999987642110 012445554433222110 00 0 125
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
.+|++|+|++.|.+||......|...||+...|+|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999887656666789889999854
No 70
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=96.67 E-value=0.0014 Score=63.80 Aligned_cols=64 Identities=14% Similarity=0.249 Sum_probs=43.4
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
.|++++||+|.. ...+.++++.. .++|.++++||+++.... . .+.++.+. ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~-~--~~~~~~l~----~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAE-N--VECLELIT----FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSC-H--HHHHGGGG----STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCCC-h--HHHHHHHh----cCCEE
Confidence 689999999843 23455666553 368999999999954332 2 12233322 35899
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999964
No 71
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.66 E-value=0.012 Score=49.57 Aligned_cols=91 Identities=12% Similarity=-0.064 Sum_probs=56.1
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+.+ ...+.++++|+|........ ..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 456666665 33357899999987632110 1234556544322111 0010 0 1345
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+|++|+|++.|.+||......|...+|+...|+|.+.
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998875556667888889998654
No 72
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.64 E-value=0.0052 Score=53.27 Aligned_cols=97 Identities=19% Similarity=0.104 Sum_probs=54.5
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccC-CCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKG-DLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
.-|.+|..+.+. ..+.++++|.|.-..+... ..-.|+|...+ ...+..... .. ++..
T Consensus 16 ~~P~~P~~~~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEE-EccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 456777777763 3457899999985422110 12356666543 222211100 00 1123
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeE-EEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIY-SFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~-~F~T~p~ 285 (617)
...+|++|+|+++|.|||......|...+|..- .+++.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 456789999999999999876444444455433 3555443
No 73
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.63 E-value=0.0083 Score=51.86 Aligned_cols=92 Identities=12% Similarity=-0.035 Sum_probs=55.4
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCC--CC-CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYD--IS-EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~--~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
|.+|..|.+. ..+.++++|.|..... .. -..-.|+|...++..+...... ....-.
T Consensus 11 p~~P~~P~v~-~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~~ 69 (112)
T 1bpv_A 11 IDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILENE 69 (112)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSSE
T ss_pred CCCCCCCEEE-EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccCE
Confidence 5677888874 3357899999984321 11 1234678876544333221100 001123
Q ss_pred EEecCCCCCcEEEEEEeeecCCCC-ccceeeEEEEcC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGS-YVWSKIYSFRAS 283 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~-~~~S~~~~F~T~ 283 (617)
.+++||+||+.|.|||......|. ..+|..-...|.
T Consensus 70 ~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 568999999999999998755564 556655555554
No 74
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.63 E-value=0.016 Score=49.42 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=52.9
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCC--CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEA--APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
.|.+|...++ ...+.+++.++|..+...... .-.|+|..+.. ..... .-...
T Consensus 7 ~Ps~v~~l~v-~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~-----------------~~~t~ 60 (104)
T 2dle_A 7 GAIQVFDVTA-VNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--------SSNLN-----------------VSEPR 60 (104)
T ss_dssp SCCBEEEEEE-EEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--------EEEEE-----------------ESSSE
T ss_pred CCCCCceEEE-EEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--------eEEEc-----------------CCCCE
Confidence 4455555555 344578999999866331111 23455553311 01111 01245
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
++|+||+|||.|.++|.... ++...-+....++|.|.|.
T Consensus 61 ~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 61 AVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp EECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred EEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 78999999999999999863 2322224466778877653
No 75
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.61 E-value=0.009 Score=51.39 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=57.5
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCC--C--CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDI--S--EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
+|..+++ ...+.++++|.|...... . -..-.|+|...+........ . ......+-....
T Consensus 18 ~P~~~~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS-I---------------VEMKATGDSEVY 80 (122)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB-C---------------CBCCCCSSEEEE
T ss_pred CCcceEE-EeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE-E---------------EEEecCCceeEE
Confidence 4555555 334578999999887430 1 01234666554322110000 0 000112345778
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+|+||+|++.|.+||......|...||....|+|.+.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765555556788888988754
No 76
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.57 E-value=0.0084 Score=51.39 Aligned_cols=93 Identities=18% Similarity=0.139 Sum_probs=57.9
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCC----EEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAP----FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|.+|..+.+.. .+.++++|.|.-... .... .|+|...+...... ... .....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~ 73 (119)
T 2ed7_A 17 LPSAPRDVVPVL-VSSRFVRLSWRPPAE--AKGNIQTFTVFFSREGDNRERA------LNT--------------TQPGS 73 (119)
T ss_dssp SCCCCSCCEEEE-ECSSCEEEECCCCSC--CSSCEEEEEEEEEESSCCCCEE------EEC--------------CCTTC
T ss_pred CCcCCcceEEEe-cCCCEEEEEEeCCCC--CCCcEEEEEEEEEeCCCCccee------eEe--------------ecCCc
Confidence 356777776643 357899999987642 1222 34454433221110 000 01123
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 4568899999999999998776566667888889998764
No 77
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.50 E-value=0.0038 Score=54.99 Aligned_cols=40 Identities=23% Similarity=0.416 Sum_probs=33.7
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
.++++||+|+|+|.+||......|...||+...++|.+.|
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998766676778888999998754
No 78
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.47 E-value=0.0088 Score=51.42 Aligned_cols=92 Identities=16% Similarity=0.310 Sum_probs=56.7
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEE----EeccCC-CcceecccceEEeecccCCCCCccccccCCCe
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVE----WGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGF 244 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~----yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 244 (617)
-|.+|..+.+.. .+.++++|.|..... ...+... |..... ..+.. .+.. ..
T Consensus 17 ~P~~P~~~~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~-----~~~~---------------~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIAN-RTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFCQ-----CYMG---------------SQ- 72 (118)
T ss_dssp CCCCCCCCEEEE-EETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCEE-----EEEE---------------SC-
T ss_pred CCcCCCCcEEec-cCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeEE-----eecc---------------CC-
Confidence 355666666633 346899999987643 2233444 433322 11110 0110 11
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
...++++|+|++.|.|||......|...+|+...|+|.+.+
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 34578999999999999987755666678888889887653
No 79
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=96.46 E-value=0.016 Score=54.91 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=55.3
Q ss_pred CCccceEeecC-CCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 173 APLYPRLAQGK-SWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 173 ~P~~~~La~~~-~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
+|..+.+.... +.++++|+|.-...... ..-.|+|...+...... -..... ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 56666664443 36899999987542110 11245665443321100 000111 11234567
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
|+||+|++.|.++|......|...+|+...|++..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999877555666778888888754
No 80
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.46 E-value=0.0077 Score=52.14 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=55.2
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCC----CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEA----APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
+|..+.+. ..+.++++|.|......... .-.|+|...+...+.. .. ++.....
T Consensus 31 ~P~~l~~~-~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-----~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSLE-VVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEME-----TL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCEE-EEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEE-----EE-----------------CSSCSEE
T ss_pred CCeeeEEE-EcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceE-----Ee-----------------cCCcCEE
Confidence 45555553 23468999999876431011 2345565543321110 00 1123456
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
+|++|+|++.|.+||......|...||+...|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 899999999999999877556666788888999864
No 81
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=96.44 E-value=0.029 Score=53.23 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=58.1
Q ss_pred CCCCCccceEeecC---CCCcEEEEEEeCCCCCC------CCCEEEEeccCCCcceecccceEEeecccCCCCCcccccc
Q 007133 170 NPKAPLYPRLAQGK---SWDEMTVTWTSGYDISE------AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWR 240 (617)
Q Consensus 170 ~~~~P~~~~La~~~---~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~ 240 (617)
-|.+|..+.+.... ..+++.|.|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 46677776665432 36899999988643210 12245565543322211 000
Q ss_pred CCCeEEEEEecCCCCCcEEEEEEeeecCCCC-ccceeeEEEEcCC
Q 007133 241 DPGFIHTSFLKNLWPNTVYTYRIGHLLHNGS-YVWSKIYSFRASP 284 (617)
Q Consensus 241 ~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~-~~~S~~~~F~T~p 284 (617)
+......|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987654454 5688899999954
No 82
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=96.37 E-value=0.02 Score=46.64 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=46.9
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|..+.+.. ...+++.|.|..... ......|...-+. ..... . .+ -...+
T Consensus 4 P~~P~~l~~~~-~~~~sv~L~W~~~~~---~~~i~~Y~v~~~~-------~~~~~----------~-----~~--~~~~~ 55 (88)
T 1k85_A 4 PTAPTNLASTA-QTTSSITLSWTASTD---NVGVTGYDVYNGT-------ALATT----------V-----TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEE-ECSSCEEEEEECCSC---CSSEEEEEEEESS-------SEEEE----------E-----SS--SEEEE
T ss_pred cCCCCccEEEe-ccCCEEEEEECCCCC---CCCccEEEEEECC-------EEEee----------c-----CC--CEEEe
Confidence 55676666533 247899999987642 1234555432110 00000 0 11 13468
Q ss_pred cCCCCCcEEEEEEeeecCCCC-ccceeeEEEEc
Q 007133 251 KNLWPNTVYTYRIGHLLHNGS-YVWSKIYSFRA 282 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~-~~~S~~~~F~T 282 (617)
++|+||++|+|+|......|. ...|....|+|
T Consensus 56 ~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 999999999999987644443 22344555543
No 83
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.34 E-value=0.028 Score=49.01 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=33.6
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
....+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 45678899999999999998875556567888889999763
No 84
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=96.34 E-value=0.018 Score=48.71 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=52.1
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
|.+|..+.+ ...+.++++|.|.-... .-..-.|+|..... .... .... ++-...++
T Consensus 3 p~~P~~l~v-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~~~----~~~v-----------------~~~~~~~~ 59 (104)
T 2rb8_A 3 LDAPSQIEV-KDVTDTTALITWMPPSQ-PVDGFELTYGIKDVPGDRT----TIDL-----------------TEDENQYS 59 (104)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCCE----EEEE-----------------ETTCCEEE
T ss_pred CCCCCccEE-EEecCCeEEEEEcCCCC-ccceEEEEEEECcCCCceE----EEEc-----------------CCCcCEEE
Confidence 556777666 33457899999976532 11123566765421 1110 0111 11224568
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
|+||+|||+|.++|......|... .....|+|.+..
T Consensus 60 l~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 60 IGNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred eCCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 999999999999998764333221 234568887654
No 85
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=96.31 E-value=0.0045 Score=62.85 Aligned_cols=65 Identities=15% Similarity=0.212 Sum_probs=43.4
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeEE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI 369 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 369 (617)
+++++||+|.. ...+.++++.. .++|.++++||+++...... +.++.+..+ ..+++.
T Consensus 2 ~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 2 ATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSL--GDSVRL 61 (280)
T ss_dssp CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHT--GGGEEE
T ss_pred eEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhC--CCceEE
Confidence 68999999853 34566777654 35799999999995433222 233333332 137999
Q ss_pred cccCCCCC
Q 007133 370 GSGNHERD 377 (617)
Q Consensus 370 v~GNHD~~ 377 (617)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999964
No 86
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=96.29 E-value=0.026 Score=53.39 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=54.8
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCC------CCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYD------ISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
.+|..+.+ ...+.++++|+|..+.. .....-.|+|...+..... ..... +-.
T Consensus 6 ~~P~~l~~-~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~ 63 (211)
T 3p4l_A 6 MPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNAN-----------------ATT 63 (211)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEEE-----------------ESS
T ss_pred CCCCCEEE-EecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEeC-----------------CCc
Confidence 35666655 33457899999987421 0111235666654332110 00111 113
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...+|++|+|++.|.++|......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4567899999999999998765555556777888998653
No 87
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.28 E-value=0.0099 Score=51.01 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=52.1
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCE----EEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPF----VEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|.+|..+.+ ...+.++++|.|..... . ... |+|...+...+. .... ..+..
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~--~-g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~ 72 (118)
T 2yrz_A 17 VPDTPTRLVF-SALGPTSLRVSWQEPRC--E-RPLQGYSVEYQLLNGGELH------RLNI--------------PNPAQ 72 (118)
T ss_dssp CCCCCCCCEE-CCCBTTEEEEECCCCCC--S-SCEEEEEEEEEBSSSCCEE------EEEE--------------SCTTC
T ss_pred CCCCCCceEE-EeCCCCEEEEEeCCCCC--C-CCccEEEEEEEECCCCceE------EEEc--------------CCCCc
Confidence 3455666655 33357899999987643 1 133 444433221111 0000 01123
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCcccee-eEEEEcCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSK-IYSFRASP 284 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~-~~~F~T~p 284 (617)
..++|++|+|++.|.+||......|...||. ...++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 4567899999999999998875556556676 44455543
No 88
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.20 E-value=0.027 Score=47.16 Aligned_cols=79 Identities=10% Similarity=0.119 Sum_probs=46.9
Q ss_pred CCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEE
Q 007133 184 SWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTY 261 (617)
Q Consensus 184 ~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Y 261 (617)
+.++++|.|........ ..-.|+|...+...+.. .... .-....+|++|+|++.|.+
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDFG-----------------KDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEeC-----------------CCccEEEeCCCCCCCEEEE
Confidence 67899999988642110 12346666544322211 1111 1123567899999999999
Q ss_pred EEeeecCCCCccceeeEEEEcCC
Q 007133 262 RIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 262 rv~~~~~dg~~~~S~~~~F~T~p 284 (617)
||......|...+|. ..|+|.+
T Consensus 78 ~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 78 RLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEcCCcccCCee-eEEeCCC
Confidence 998765444445565 4577754
No 89
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.15 E-value=0.016 Score=50.63 Aligned_cols=41 Identities=17% Similarity=-0.100 Sum_probs=32.8
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...++|+||+|++.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765556566888888988754
No 90
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.13 E-value=0.0054 Score=61.50 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CC-CcEEEEcCccccCCCcHhHHHHHHHhhhhhhcCCCeE
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SN-IDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYM 368 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 368 (617)
.|++++||+|.. ...++++++.. .+ .|.++++||+++...... +.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~---~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF---GVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH---HHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH---HHHHHHHH----CCCE
Confidence 389999999842 24456666543 23 499999999996433221 22333322 4799
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.++||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999964
No 91
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.11 E-value=0.015 Score=49.94 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=33.0
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
..+.|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998776566667888889999754
No 92
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.08 E-value=0.014 Score=50.83 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=55.3
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEecc---CCCcceecccceEEeecccCCCCCccccccCCCe
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLK---GDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGF 244 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 244 (617)
-|.+|..+.+ ...+.++++|.|.-..+... ..-.|+|... +...+.... ... ..+.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~---~~~---------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH---QLS---------------NEPD 77 (124)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE---EEE---------------SCTT
T ss_pred CCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee---eEc---------------cCCC
Confidence 4556666655 33457899999965533111 1235666652 222221100 000 0112
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceee-EEEEcCCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKI-YSFRASPYP 286 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~-~~F~T~p~~ 286 (617)
...+++++|+|++.|.|||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 345688999999999999987755555556653 467877654
No 93
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.03 E-value=0.016 Score=49.15 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=46.8
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCC----EEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAP----FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
|.+|..+.+. ..+.++++|.|..... ....+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~-~g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDH-IGAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSS-CCSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCC-CCCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4556655553 3357899999987642 11223 34555443322211100 011123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCcccee
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSK 276 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~ 276 (617)
..++++|+|+++|.|||......|...+|.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 457899999999999998764444334443
No 94
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.03 E-value=0.011 Score=50.54 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=52.7
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+. ..+.++++|.|........ ..-.|+|...+. ..+.... .. ....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~----------------~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA-----NH----------------VKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE-----EE----------------ECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc-----cc----------------cCcC
Confidence 45667777764 3457899999976542110 113455554321 1111000 00 0112
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEE-EEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYS-FRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~-F~T~p~ 285 (617)
..++++|+|++.|.|||......|...+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998765444445565444 777654
No 95
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.02 E-value=0.022 Score=48.97 Aligned_cols=93 Identities=20% Similarity=0.289 Sum_probs=53.5
Q ss_pred CCCCCccc--eEeecCCCCcEEEEEEeCCCCCCCCCE----EEEeccCCCcceecccceEEeecccCCCCCccccccCCC
Q 007133 170 NPKAPLYP--RLAQGKSWDEMTVTWTSGYDISEAAPF----VEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPG 243 (617)
Q Consensus 170 ~~~~P~~~--~La~~~~~~~m~V~W~T~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 243 (617)
.|.+|..+ .+ ...+.++++|.|.-..+ ...+. |+|...+ ..+.. .. .. .++
T Consensus 17 ~P~~P~~~~~~~-~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~~------~~-~~------------~~~ 73 (121)
T 1wf5_A 17 LPHAPEHPVATL-STVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWTV------LL-AS------------VDP 73 (121)
T ss_dssp CCCCCSSCEEEE-CSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCEE------EE-SS------------CCT
T ss_pred CCccCCCcceee-EeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCceE------eE-cc------------cCC
Confidence 46677777 44 33357899999976532 22334 3443332 11110 00 00 011
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCccceeeE-EEEcCCC
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIY-SFRASPY 285 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~-~F~T~p~ 285 (617)
.....++++|+|+++|.|||......|...+|..- .++|++.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 23456889999999999999887555555566553 4666654
No 96
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.00 E-value=0.028 Score=48.27 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=52.0
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|...++ ...+.++++|.|.-... .-..-.|+|...+.... .... ++-...++
T Consensus 7 ~p~~P~~l~~-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEE-EeccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 4556766555 23347899999976532 11123466654322110 0111 11224578
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
|+||+|+|+|.++|......+... .....|+|.+.+
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~~ 98 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 98 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCCC
Confidence 999999999999998753222111 234678887543
No 97
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.98 E-value=0.033 Score=46.94 Aligned_cols=92 Identities=13% Similarity=0.040 Sum_probs=51.5
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
+.+|...++. ..+.++++|.|.-... ...-.|+|...+...+.. ..... -++. .++|
T Consensus 9 ~~~P~~l~~~-~~~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~---~~~~~---------------~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLA-AVTPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE---EREVQ---------------VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC---CEEEE---------------ESSS--EEEE
T ss_pred CCCCceeEEE-ecCCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc---eEEEe---------------cCCC--EEEE
Confidence 4567777763 3346899999976532 123456666543211100 00000 0122 7789
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
+||+|+|+|.++|......+... .....++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCCC
Confidence 99999999999998763222211 123456676543
No 98
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.96 E-value=0.045 Score=46.94 Aligned_cols=91 Identities=19% Similarity=0.147 Sum_probs=52.4
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEec
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLK 251 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~ 251 (617)
.+|....+ ...+.++++|+|..... .-..-.|+|...++.... .... ++-...+.|+
T Consensus 9 ~pP~~l~~-~~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~~----~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGF-SDVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHSG----QTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEE-ESCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCBC----CEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEE-EEccCCeEEEEeeCCCC-CccEEEEEEEeCCCCcee----EEEc-----------------CCCcCEEEcC
Confidence 45666665 34458999999976532 112336777654332110 0111 1122457899
Q ss_pred CCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 252 NLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 252 gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
||+|+|+|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999875433332212 3468887433
No 99
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=95.84 E-value=0.046 Score=47.47 Aligned_cols=40 Identities=25% Similarity=0.300 Sum_probs=31.8
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
..++|++|+|+|+|.+||......|...+|+...|+|.|.
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 3567899999999999998765555556788888877764
No 100
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=95.82 E-value=0.0099 Score=62.03 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=44.1
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC----------CCcEEEEcCccccCCCcHhHHHHHHHhhhhh
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS----------NIDIVFHIGDITYANGYISQWDQFTAQVEPI 361 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 361 (617)
.+++++||+|.. ...+.++++... ++|.++++||+++.+.... +.+..+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHH
Confidence 689999999853 345666666422 4799999999996443322 222222222
Q ss_pred -----hcCCCeEEcccCCCCC
Q 007133 362 -----ASTVPYMIGSGNHERD 377 (617)
Q Consensus 362 -----~~~vP~~~v~GNHD~~ 377 (617)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2345699999999963
No 101
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.77 E-value=0.068 Score=45.11 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=52.2
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|...++. ..+.+++.|+|.-... .-..-.|+|...++. .. .... ++-...++
T Consensus 7 ~p~~P~~l~v~-~~~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~----~~~~-----------------~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEAK-EVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ----EILL-----------------PGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE----EEEE-----------------CSSCSEEE
T ss_pred CCCCCCceEEE-eccCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE----EEEE-----------------CCCccEEE
Confidence 45667666653 3357899999976532 111234667643321 10 0000 11234678
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
|+||+|+++|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998763333221 23567888643
No 102
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.76 E-value=0.033 Score=52.64 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=56.5
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCC--C-CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDI--S-EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+.... .+++|.|...... . -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~--~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS--STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECS--SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeecc--CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 45667666664333 3699999886321 1 112346666544322211 111100 001223
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
..++++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765555556777788998764
No 103
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.71 E-value=0.024 Score=51.08 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=32.0
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
..++|+||+|+|.|..||......|...+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 5678999999999999998764444455788889999864
No 104
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=95.67 E-value=0.089 Score=43.87 Aligned_cols=75 Identities=25% Similarity=0.299 Sum_probs=45.1
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|..+.+. ..+.++++|+|.-... .-..-.|+|...+..... ..... ++-.-.++|
T Consensus 2 p~~P~~l~~~-~~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVT-NITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVDL-----------------TSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEEE-----------------CTTEEEEEE
T ss_pred CccCCccEEE-EecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEEE-----------------CCcceEEEE
Confidence 4567666663 3457899999987632 112235667644321100 00000 123456789
Q ss_pred cCCCCCcEEEEEEeeec
Q 007133 251 KNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~ 267 (617)
+||+|+|+|.++|....
T Consensus 60 ~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 60 TNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998763
No 105
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.62 E-value=0.038 Score=48.02 Aligned_cols=40 Identities=15% Similarity=0.053 Sum_probs=33.4
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...+|++|+|++.|.+||......|...||+...|+|++.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 3557899999999999998776566667899999999875
No 106
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=95.61 E-value=0.048 Score=45.89 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=51.6
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCC--C-C-CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDI--S-E-AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~--~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
+|....+ -..+.+++.|+|...... + . ..-.|.|...+...... ....+.. +-...+
T Consensus 7 ~P~~~~~-~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYT-EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD-YKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEE-EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG-CEEEEEE-----------------TTCSEE
T ss_pred CCceeEE-EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc-eEEEEEc-----------------CCceEE
Confidence 3444444 334578999999876310 0 0 12257777654321000 0011111 011245
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
+|++|+|+|.|..+|..-...|...+|+...++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998765555556677777776
No 107
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.57 E-value=0.06 Score=51.98 Aligned_cols=100 Identities=17% Similarity=0.130 Sum_probs=56.2
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+.+. ..+.++++|.|.-...... ..-.|+|...++....... ..... .........
T Consensus 99 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~ 162 (234)
T 3f7q_A 99 PSEPGRLAFN-VVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGP-MKKVL--------------VDNPKNRML 162 (234)
T ss_dssp CCCCCCCEEE-ECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSC-CEECC--------------CSCTTCCEE
T ss_pred CCCCCccEEE-EecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCc-ceEEE--------------ecCCcceEE
Confidence 5566666653 3457899999986532110 1224666654332111000 00000 001123456
Q ss_pred EecCCCCCcEEEEEEeeecCCCCcccee-eEEEEcCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSK-IYSFRASPYP 286 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~-~~~F~T~p~~ 286 (617)
+|+||+|++.|.++|......|...+|. ...|+|.+.+
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 163 LIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 8999999999999998765555555665 4778887643
No 108
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=95.56 E-value=0.069 Score=46.12 Aligned_cols=82 Identities=18% Similarity=0.385 Sum_probs=42.3
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCE----EEEeccC-CCcceecccceEEeecccCCCCCcccccc-CCCeEE
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPF----VEWGLKG-DLQMHSPAGTLTFFQNDMCGSPARTVGWR-DPGFIH 246 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~----V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~-~~g~~h 246 (617)
.|..|.+ ...+.++++|.|.-+... ..+. |+|...+ ...+........+... -|. ..+-..
T Consensus 5 pP~~P~v-~~~~~~sv~L~W~~P~~~--G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~----------~~~~~~~~~~ 71 (115)
T 2ic2_A 5 PPTPPNV-TRLSDESVMLRWMVPRND--GLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP----------KWNSELGKSF 71 (115)
T ss_dssp CCCCCEE-EECC---EEEEEEEECCS--SCCEEEEEEEEEECC---CCEEEEEEEECCSC----------SCSSSSEEEE
T ss_pred CCCcCEe-EEEeCCEEEEEEcCCCCC--CCCCceEEEEEEECCCCCCceECccccccccc----------ccccccCcee
Confidence 4555554 344679999999886542 2344 5555542 2223221111111000 000 123345
Q ss_pred EEEecCCCCCcEEEEEEeeec
Q 007133 247 TSFLKNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~ 267 (617)
.+++++|+|++.|.+||....
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEe
Confidence 678999999999999998764
No 109
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.54 E-value=0.057 Score=47.28 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=33.6
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
...++|+||+|+|.|.++|..-...|...+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765556667898899999764
No 110
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=95.53 E-value=0.15 Score=48.33 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=56.5
Q ss_pred CCCCCccceEeecC-----CCCcEEEEEEeCCCCCC--CCCEEEEe-ccCCCcceecccceEEeecccCCCCCccccccC
Q 007133 170 NPKAPLYPRLAQGK-----SWDEMTVTWTSGYDISE--AAPFVEWG-LKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD 241 (617)
Q Consensus 170 ~~~~P~~~~La~~~-----~~~~m~V~W~T~~~~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 241 (617)
.|.+|..+.+.... ..++++|.|........ -.-.|+|. ..+...+.... ..
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~---~~----------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF---HL----------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE---EE-----------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe---cc-----------------
Confidence 46677665553321 46889999987642100 12346666 44333222100 00
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCCCCc---cceeeEEEEcCC
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHNGSY---VWSKIYSFRASP 284 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~---~~S~~~~F~T~p 284 (617)
.+......|.+|+|+|+|.+||......|.. .||+...|+|+.
T Consensus 168 ~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 1123567899999999999999977443333 477888898864
No 111
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=95.52 E-value=0.097 Score=53.96 Aligned_cols=40 Identities=20% Similarity=0.144 Sum_probs=31.4
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
...+|++|+|++.|.+||......|...+|.. .|+|+|.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999998755565566655 89998875
No 112
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.48 E-value=0.015 Score=59.68 Aligned_cols=68 Identities=24% Similarity=0.235 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhhc--CCCe
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIAS--TVPY 367 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~--~vP~ 367 (617)
.+++++||+|.. ...+.++++.. ...+.++++||+++. |..+ .+.+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYVDR-GYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCSSS-STTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCccCC-CCCh--HHHHHHHHHHHhhCCCcE
Confidence 359999999853 34456666542 346778999999954 4332 122333322221 3358
Q ss_pred EEcccCCCCC
Q 007133 368 MIGSGNHERD 377 (617)
Q Consensus 368 ~~v~GNHD~~ 377 (617)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
No 113
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=95.46 E-value=0.22 Score=49.36 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=55.6
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.+.+|..+.+. ..+.++++|.|....+ ....-.|+|...++.... .... .+......
T Consensus 112 ~~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~ 168 (290)
T 3r8q_A 112 NVSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYT 168 (290)
T ss_dssp CCCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEE
T ss_pred CCCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEE
Confidence 34566666663 3457899999987632 122345666654322110 0111 11223467
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEe
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFG 298 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~G 298 (617)
|+||+|++.|.++|......|... .....++|.|.+.. .+++...+
T Consensus 169 i~~L~p~t~Y~~~V~A~n~~g~s~-~~~~~~~t~p~~P~--~l~~~~~~ 214 (290)
T 3r8q_A 169 ITGLQPGTDYKIYLYTLNDNARSS-PVVIDASTAIDAPS--NLRFLATT 214 (290)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCE--EEEEEEEE
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEecCCCCCCC--ccEEEeeC
Confidence 899999999999998753222211 12345566654322 25554443
No 114
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.45 E-value=0.049 Score=46.34 Aligned_cols=92 Identities=11% Similarity=0.050 Sum_probs=54.9
Q ss_pred cccCCCCCccceEeecC-CCCcEEEEEEeCCC-----CCCCCCEEEEeccCCCcceecccceEEeecccCCCCCcccccc
Q 007133 167 TFANPKAPLYPRLAQGK-SWDEMTVTWTSGYD-----ISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWR 240 (617)
Q Consensus 167 ~~~~~~~P~~~~La~~~-~~~~m~V~W~T~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~ 240 (617)
...-|.+|....+..-. ..+++.|.|..... ...-.-.|+|...+...+.. .. .
T Consensus 4 ~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~-~--------------- 63 (109)
T 1uc6_A 4 GSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VE-L--------------- 63 (109)
T ss_dssp TSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EE-E---------------
T ss_pred CEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Ee-c---------------
Confidence 34457788887776533 46899999988642 00123467777654322211 00 0
Q ss_pred CCCeEEEEEecCCCCCcEEEEEEeeecCCCCcc---ceeeEEEE
Q 007133 241 DPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYV---WSKIYSFR 281 (617)
Q Consensus 241 ~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~---~S~~~~F~ 281 (617)
.....+.|.+|+||++|..||..... |... ||....++
T Consensus 64 --~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~WS~~~~~~ 104 (109)
T 1uc6_A 64 --SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHAT 104 (109)
T ss_dssp --SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCCCCEEEEEC
T ss_pred --ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCcCCCCeeee
Confidence 00124578999999999999997642 4433 44454444
No 115
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=95.43 E-value=0.017 Score=49.90 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=46.3
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCC---CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDIS---EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+. ..+.++++|.|..+.... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIE-DVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEE-EEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEE-EecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 45677776663 334689999998764211 112457776554333221100 00112
Q ss_pred EEEecCCCCCcEEEEEEeeecCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNG 270 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg 270 (617)
..++++|+|++.|.|||......|
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n~~G 98 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSENMCG 98 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCSSSC
T ss_pred EEEECCCCCCCEEEEEEEEeeCCc
Confidence 347899999999999998754334
No 116
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.43 E-value=0.032 Score=47.31 Aligned_cols=85 Identities=16% Similarity=0.131 Sum_probs=46.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+. ..+.++++|+|.-...... ..-.|+|...+...+..... .+....
T Consensus 8 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 34566655553 3347899999987643111 11345565443322221110 011123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccce
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWS 275 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S 275 (617)
..++++|+|++.|.|||......|...+|
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S 95 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPA 95 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCc
Confidence 45789999999999999876433333334
No 117
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=95.43 E-value=0.47 Score=44.50 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=43.4
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecC
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKN 252 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~g 252 (617)
+|..+.+. ..+.++++|.|.-..+..-..-.|+|....+.... ..... ++-....+|+|
T Consensus 116 ~P~~l~~~-~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 174 (203)
T 2gee_A 116 PPTDLRFT-NIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 174 (203)
T ss_dssp CCEEEEEE-EEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGC---EEEEE-----------------CTTCCEEEECS
T ss_pred CCCceEEE-EcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCcc---EEEEc-----------------CCCcCEEEECC
Confidence 56655542 23468999999887431112345667654321100 01111 12234568899
Q ss_pred CCCCcEEEEEEeeec
Q 007133 253 LWPNTVYTYRIGHLL 267 (617)
Q Consensus 253 L~Pgt~Y~Yrv~~~~ 267 (617)
|+|++.|.++|....
T Consensus 175 L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 175 LLPGTEYVVSVSSVY 189 (203)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred CCCCCEEEEEEEEec
Confidence 999999999998753
No 118
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.41 E-value=0.07 Score=51.46 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=55.6
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEec
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLK 251 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~ 251 (617)
.+|..+.+ ...+.++++|+|.-..+ ....-.|+|...++.... ..... +.....+|+
T Consensus 7 ~~P~~l~~-~~~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~ 63 (234)
T 3f7q_A 7 GAPQNPNA-KAAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVELT 63 (234)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEEC
T ss_pred CCCcceEE-EEcCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEEC
Confidence 45666665 33457899999987632 222345677654432111 01111 112356789
Q ss_pred CCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 252 NLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 252 gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
+|+|+|.|.++|......|...+|....|+|.+
T Consensus 64 ~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 64 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 999999999999876545555577788898864
No 119
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.41 E-value=0.09 Score=45.37 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=51.6
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcc----ee-cccceEEeecccCCCCCccccccCCCeEEE
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQM----HS-PAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~----~~-~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
+|...++ ...+.++++|+|....+ .-..-.|+|....+... .. ....... ++-...
T Consensus 11 ~p~~L~v-~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----------------~~~~t~ 71 (112)
T 2cui_A 11 RLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----------------PGTRHS 71 (112)
T ss_dssp CCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----------------ETTCCE
T ss_pred CCCceEE-EeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEEc-----------------CCCcCE
Confidence 4455554 33457999999986532 11234677875432100 00 0001111 122346
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
++|+||+|||+|..+|......+. .-.-....+|.+.+
T Consensus 72 ~~l~gL~PgT~Y~~~V~A~~~~~~-s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 72 AVLRDLRSGTLYSLTLYGLRGPHK-ADSIQGTARTLSGP 109 (112)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSE-EEEEEEEEECCCCS
T ss_pred EEeCCCCCCCEEEEEEEEEECCcc-cCCEEEEEEECCCC
Confidence 899999999999999987532221 11234567776654
No 120
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.38 E-value=0.029 Score=48.77 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=28.6
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceee-EEEEcCCCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKI-YSFRASPYP 286 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~-~~F~T~p~~ 286 (617)
.+.+|+|++.|.|||......|...+|.. ..|+|.+.+
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 36799999999999988755565566765 478886643
No 121
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.37 E-value=0.042 Score=47.34 Aligned_cols=40 Identities=20% Similarity=0.119 Sum_probs=32.6
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
..++|+||+|+|.|.++|......|...+|+...|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765556567888889999754
No 122
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.37 E-value=0.069 Score=44.13 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=50.0
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEec
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLK 251 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~ 251 (617)
.+|..+.+. ..+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+
T Consensus 3 ~~P~~l~v~-~~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (98)
T 3teu_A 3 DAPTDLQVT-NVTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTIT 60 (98)
T ss_dssp CCCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEEC
T ss_pred CCCCceEEE-EecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEec
Confidence 356666553 3346899999987632 112235777643321100 00111 1123456899
Q ss_pred CCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 252 NLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 252 gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
||+|++.|.++|..... .+.|+...+...+.
T Consensus 61 ~L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKD---NQESPPLVGTQTTG 91 (98)
T ss_dssp SCCTTCEEEEEEEEEET---TEECCCEEEEEECS
T ss_pred CCCCCCEEEEEEEEEeC---CCCCCCeEEEeccC
Confidence 99999999999987632 23455555555443
No 123
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=95.34 E-value=0.093 Score=51.33 Aligned_cols=93 Identities=11% Similarity=0.140 Sum_probs=55.8
Q ss_pred cCCCCCccceEeecCC-C----CcEEEEEEeCCCCC--C----CCCEEEEeccCCCcceecccceEEeecccCCCCCccc
Q 007133 169 ANPKAPLYPRLAQGKS-W----DEMTVTWTSGYDIS--E----AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTV 237 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~-~----~~m~V~W~T~~~~~--~----~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~ 237 (617)
..|.+|..+.+..... . .++.|.|..+.... . -.-.|+|..+++..+....
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------ 190 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------ 190 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------------
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------------
Confidence 3577887775443331 2 35999999874310 0 1234556555432221100
Q ss_pred cccCCCeEEEEEecCCCCCcEEEEEEeeecCCC--CccceeeEEEEcC
Q 007133 238 GWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNG--SYVWSKIYSFRAS 283 (617)
Q Consensus 238 g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg--~~~~S~~~~F~T~ 283 (617)
......+.|.+|+||++|..||.....+| -..||+...|+|+
T Consensus 191 ----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 11124567899999999999999876555 3467778888775
No 124
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.30 E-value=0.11 Score=44.49 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=49.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
-|.+|..+++ ...+.++++|.|........ ..-.|+|...+..... ..... .+....
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTR---VTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGC---CCEEE-----------------CSSCCE
T ss_pred CCCCCCceEE-EECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCce---EEEEe-----------------CCCceE
Confidence 3455655555 33357899999987642110 1124555443321100 00110 123356
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeE
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIY 278 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~ 278 (617)
++|++|+|++.|.+||......|...+|...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999887555555666554
No 125
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=95.25 E-value=0.054 Score=49.98 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=44.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCC---CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDIS---EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
.|.+|..+.+. ..+.++++|+|....... -..-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLM-DVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEE-EECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEE-eccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 35566666653 334789999998753211 012355565543322211 000 0112
Q ss_pred EEEecCCCCCcEEEEEEeeecCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNG 270 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg 270 (617)
..++++|+|++.|.|+|......|
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n~~G 182 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQNEKG 182 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTE
T ss_pred EEEeCCcCCCCEEEEEEEEEeCCc
Confidence 457899999999999998764333
No 126
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.21 E-value=0.11 Score=48.89 Aligned_cols=90 Identities=17% Similarity=0.100 Sum_probs=51.1
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCC-C-CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDIS-E-AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+.+ ...+.++++|.|....... . ..-.|+|.. ++..+.. .... ++.....
T Consensus 110 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~---~~~~-----------------~~~~~~~ 167 (209)
T 2vkw_A 110 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKP---EIRL-----------------PSGSDHV 167 (209)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCC---CEEE-----------------CTTCCEE
T ss_pred CCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCce---eeec-----------------CCCccEE
Confidence 455554333 2345789999999863211 0 123466665 2211110 0111 1122346
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
+|++|+|++.|.+||......|...+|+...+++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 7999999999999998775555555666665554
No 127
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=95.21 E-value=0.14 Score=51.74 Aligned_cols=133 Identities=12% Similarity=0.126 Sum_probs=71.9
Q ss_pred cceEEEEEE--eecccceEEEEEeCCCCCcEEEEEcCcccc-----cCCCCCccceEeecC-----CCCcEEEEEEeCCC
Q 007133 130 GKATLNFRL--INQRSDFSFGLFSGGLSNPKLVAVSNSITF-----ANPKAPLYPRLAQGK-----SWDEMTVTWTSGYD 197 (617)
Q Consensus 130 g~~~~~~~l--~n~r~~~~f~~~~~~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~T~~~ 197 (617)
|..+.+|.. +..-..|.|.+..-...- ...|..+.| .-|.+|..+.+.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G---~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENALG---TSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETTE---EEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCCC---CccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 444556654 233346777776531110 011222222 236677655543321 36899999987642
Q ss_pred CCC--CCCEEEEe-ccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCc--
Q 007133 198 ISE--AAPFVEWG-LKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSY-- 272 (617)
Q Consensus 198 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~-- 272 (617)
... -.-.|+|. ..+...+.... .. .+..+...|++|+|+|+|..||......|..
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~~---~~-----------------~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALVG---PL-----------------PLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEEE---EE-----------------CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEcc---cc-----------------cCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 12356676 44333332110 00 1234667899999999999999976443443
Q ss_pred -cceeeEEEEcCCC
Q 007133 273 -VWSKIYSFRASPY 285 (617)
Q Consensus 273 -~~S~~~~F~T~p~ 285 (617)
.||+...|+|+..
T Consensus 295 S~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 295 SDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCEEECCCC-
T ss_pred CCCCCccceeCCcc
Confidence 3677888888753
No 128
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=95.21 E-value=0.14 Score=48.15 Aligned_cols=103 Identities=11% Similarity=-0.036 Sum_probs=53.6
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecC
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKN 252 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~g 252 (617)
+|..+.+ ...+.++++|.|....+.....-.|+|...++.... ...... +-....+|++
T Consensus 25 ~P~~l~~-~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFVD-----------------SSVGYYTVTG 83 (203)
T ss_dssp CCEEEEE-ECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEEE-----------------TTCCEEEECS
T ss_pred CCCccEE-EecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEcC-----------------CCccEEEeCC
Confidence 4444443 333578999999886431111335666654432110 001111 1123567899
Q ss_pred CCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEee
Q 007133 253 LWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGD 299 (617)
Q Consensus 253 L~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 299 (617)
|+|++.|.++|......| .|....+++.+.+..-..+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~g---~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNGG---ESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSSC---BCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCCC---ccccEeeeecCCCcCCCceEEEEcCC
Confidence 999999999998763222 35444555433322222345444443
No 129
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=95.21 E-value=0.051 Score=51.07 Aligned_cols=94 Identities=15% Similarity=0.117 Sum_probs=54.6
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+.. +.++++|.|.-...... ..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 466788888755 78999999987632111 123466754422 1121100 0000 0111
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccce-eeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWS-KIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S-~~~~F~T~p~ 285 (617)
...+ +|+|++.|.|||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999876444544566 4577888654
No 130
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=95.18 E-value=0.065 Score=50.68 Aligned_cols=98 Identities=18% Similarity=0.172 Sum_probs=57.0
Q ss_pred CCCCCccceEeec-CCCCcEEEEEEeCCCCC--CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQG-KSWDEMTVTWTSGYDIS--EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~-~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+... .+.+++.|.|....... ...-.|+|...++..+...... + ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~------~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc------c------------ccCccc
Confidence 4667777666432 25789999998764211 0113455655432222111000 0 012234
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCc---cceeeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSY---VWSKIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~---~~S~~~~F~T~p~ 285 (617)
..+|++|+|+|+|.+||......|.. .||....++|.+.
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 56799999999999999987544543 3667788888653
No 131
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.033 Score=57.70 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=42.4
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcCC---CcEEEEcCccccCCCcHhHHHHHHHhhhhh--hcCCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLSN---IDIVFHIGDITYANGYISQWDQFTAQVEPI--ASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 366 (617)
.|++++||+|.. ...+.++++.... -+.++++||+++. |..+ -+.+..+..+ ...-.
T Consensus 64 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~ 125 (335)
T 3icf_A 64 VKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFVDR-GSWS--CEVALLFYCLKILHPNN 125 (335)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCSSS-STTH--HHHHHHHHHHHHHCTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCccCC-CcCh--HHHHHHHHHHhhhCCCc
Confidence 689999999754 3456667665332 2469999999954 4322 1222222222 12345
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
++.+.||||..
T Consensus 126 v~llrGNHE~~ 136 (335)
T 3icf_A 126 FFLNRGNHESD 136 (335)
T ss_dssp EEECCCTTSSH
T ss_pred EEEecCchhhh
Confidence 88999999953
No 132
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=95.13 E-value=0.022 Score=59.03 Aligned_cols=67 Identities=18% Similarity=0.133 Sum_probs=42.4
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhh--hcCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPI--ASTVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 368 (617)
++.++||+|.. ...+.++++.. ...+-++++||+++. |..+ -+.+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDR-GKQS--LETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSS-SSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcCCC-CCCh--HHHHHHHHHhhhhcCCceE
Confidence 59999999753 34566666653 345779999999964 4332 1222322222 1234589
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
No 133
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=95.08 E-value=0.092 Score=48.35 Aligned_cols=91 Identities=13% Similarity=0.013 Sum_probs=51.4
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+. ..+.++++|.|........ ..-.|+|...+...+.... .. ....
T Consensus 5 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVK-EVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEE-EecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 46677766653 2347899999988632111 1235666554432221110 00 0123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
...+++|+|++.|.|+|......|...+|....+.+
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t 98 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVK 98 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEE
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCcccee
Confidence 457899999999999998765444444554434444
No 134
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=95.06 E-value=0.12 Score=47.68 Aligned_cols=90 Identities=10% Similarity=-0.015 Sum_probs=51.3
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|..+.+ ...+.++++|.|.-..+ .-..-.|+|...++... .... ++-.....
T Consensus 6 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEE-EecCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 4567777666 33457899999987633 11234566663321110 0111 11123457
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccce--eeEEEEcCCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWS--KIYSFRASPYP 286 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S--~~~~F~T~p~~ 286 (617)
|+||+|++.|.++|..... .+.| ....++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~~---~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEKG---RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEESS---SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEcC---CccCCCEEEEEECCCCC
Confidence 8999999999999987632 2233 34567777654
No 135
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.02 E-value=0.044 Score=47.12 Aligned_cols=92 Identities=10% Similarity=0.021 Sum_probs=53.9
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.+|..+.+.. ..++++|.|.-+..... ..-.|+|... +..+..... .+ ++-....+
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~--~~-----------------~~~~t~~~ 66 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDP--AV-----------------AGTETELL 66 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEE--EE-----------------CSSCCEEE
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeee--ec-----------------CCCcCEEE
Confidence 3555555543 45789999998753111 1235778763 222321110 01 11234456
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+.+|+||++|.+||......|....|+...++|...
T Consensus 67 v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 67 VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 999999999999998764445445566666666554
No 136
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=95.00 E-value=0.23 Score=50.86 Aligned_cols=84 Identities=15% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
-|.+|..+.+.. .+.++++|.|..... ....-.|+|...++... ....+.. +-....+
T Consensus 275 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~~-----------------~~~~~~~ 332 (368)
T 1fnf_A 275 VSDVPRDLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTVP-----------------GSKSTAT 332 (368)
T ss_dssp CCCSCEEEEEEE-EETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEEE-----------------TTCCEEE
T ss_pred CCCCCCeeEEEe-cCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEcC-----------------CCeeEEE
Confidence 455676665533 246899999987643 11223566665433211 0011111 1234567
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccce
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWS 275 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S 275 (617)
++||+||+.|.|+|......|...+|
T Consensus 333 ~~~L~p~t~Y~~~V~A~~~~G~g~~s 358 (368)
T 1fnf_A 333 ISGLKPGVDYTITVYAVTGRGDSPAS 358 (368)
T ss_dssp ECSCCTTCCEEEEEEEECCCSSSCCB
T ss_pred ecCCCCCCEEEEEEEEeCCCCcCccc
Confidence 89999999999999877555544444
No 137
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=94.95 E-value=0.13 Score=48.35 Aligned_cols=98 Identities=20% Similarity=0.287 Sum_probs=57.0
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCC----EEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAP----FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|..|..+.+. ...++++|.|..... ....+ .|+|...+...+... .+... . ...-
T Consensus 113 ~P~~p~~~~~~--~~~~~~~l~w~~p~~-~~~~pi~~y~v~~~~~~~~~w~~~----~~~~~--------~-----~~~~ 172 (215)
T 3mtr_A 113 TPSSPSIDQVE--PYSSTAQVQFDEPEA-TGGVPILKYKAEWRAVGEEVWHSK----WYDAK--------E-----ASME 172 (215)
T ss_dssp CCCCCEEEEEE--EETTEEEEEEECCSC-CCSSCEEEEEEEEEETTCCCCEEE----EEEHH--------H-----HHHH
T ss_pred CCCCCcceEEE--EecceEEEEEecCCc-cCCCceEEEEEEEEECCCCccccc----ccccc--------c-----cccc
Confidence 35556555542 235789999985432 11223 366665544332211 11100 0 0011
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456789999999999999887556666778888999988644
No 138
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=94.81 E-value=0.074 Score=58.82 Aligned_cols=94 Identities=23% Similarity=0.235 Sum_probs=56.9
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
.+.+|..+.+ ...+.++++|+|.-+..... ..-.|+|...+... ...... +....
T Consensus 440 ~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~-----~~~~v~-----------------~~~ts 496 (536)
T 3fl7_A 440 NQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSN-----SYNVRR-----------------TEGFS 496 (536)
T ss_dssp CSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CC-----CCEEEE-----------------ESSSE
T ss_pred cccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCc-----eEEEEc-----------------CCCCE
Confidence 4567888776 55568999999987632110 11356666543320 001111 11235
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
++|+||+|+|.|.+||......|...||+...|+|.+..
T Consensus 497 ~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 497 VTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 679999999999999998766666678999999998753
No 139
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=94.73 E-value=0.089 Score=44.68 Aligned_cols=89 Identities=12% Similarity=0.033 Sum_probs=48.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccC-CCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKG-DLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
-|.+|..+......+.++++|+|....+ +....-|+... +..+...+. .. .+. .-
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~~---~~~Y~VyR~~~~~~~~~~i~~--~~-----------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAPG---ANSYNVKRSTKSGGPYTTIAT--NI-----------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCTT---CSEEEEEEESSTTCCCEEEEE--EE-----------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCCC---CCEEEEEEecCCCCCcEEEee--cC-----------------CCC--EE
Confidence 4667777665443345799999987532 45555565432 111111010 00 011 11
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
+.++|+||++|+|+|..-...|....|...+.++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~ 93 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence 3489999999999998754333334455544444
No 140
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=94.71 E-value=0.065 Score=50.62 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=51.5
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEec
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLK 251 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~ 251 (617)
.+|...++ ...+.++++|.|..+.. .-..-.|+|........ ....+. ++-...++|+
T Consensus 105 ~~P~~l~v-~~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEV-VAATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEE-EEEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEE-EeCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 35555555 33347899999976532 11223566765432110 000111 1123467899
Q ss_pred CCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 252 NLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 252 gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
||+|+|+|.++|......|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999875555555566555554
No 141
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=94.68 E-value=0.035 Score=56.63 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=41.9
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhh--hcCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPI--ASTVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 368 (617)
+++++||+|.. ...+.++++.. ...+-++++||+++.+.... +.+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~---evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH---HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCCcH---HHHHHHHHHHhhCCCcEE
Confidence 48999999754 34566666653 34577899999996543322 122222221 2234589
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999964
No 142
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=94.67 E-value=0.063 Score=55.17 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=41.9
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC---CCcEEEEcCccccCCCcHhHHHHHHHhhhhh--hcCCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS---NIDIVFHIGDITYANGYISQWDQFTAQVEPI--ASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 366 (617)
.|++++||+|.. ...+.++++... ..+.++++||+++. |..+ -+.+..+..+ ...-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCccCC-CcCh--HHHHHHHHHhhhhcCCc
Confidence 589999999753 345666666532 23569999999964 4322 1222222222 12335
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88999999964
No 143
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.67 E-value=0.17 Score=50.12 Aligned_cols=93 Identities=11% Similarity=-0.041 Sum_probs=53.6
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|..+.+. ..+.++++|.|....+ ....-.|+|...+..... ..... ++-.....|
T Consensus 21 p~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 78 (290)
T 3r8q_A 21 IPAPTDLKFT-QVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVV 78 (290)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSS-CCCEEEEEEEESSSSSCC---EEEEE-----------------CTTCCEEEE
T ss_pred CCCCCceEEE-ECCCCEEEEEEeCCCC-CeeEEEEEEEeCCCCCce---EEEEc-----------------CCCccEEEe
Confidence 4456655552 3457899999988632 112345677654321110 00111 112346678
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYP 286 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~ 286 (617)
++|+|++.|.++|......|...++ ...|+|.+.+
T Consensus 79 ~~L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~ 113 (290)
T 3r8q_A 79 SGLMVATKYEVSVYALKDTLTSRPA-QGVVTTLENV 113 (290)
T ss_dssp CSCCSSCEEEEEEEEEETTEECCCE-EEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCC
Confidence 9999999999999876444433334 3567776544
No 144
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=94.67 E-value=0.15 Score=49.64 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=59.9
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCC----CCCCEEEEeccC-CCcceecccceEEeecccCCCCCccccccCCC
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDIS----EAAPFVEWGLKG-DLQMHSPAGTLTFFQNDMCGSPARTVGWRDPG 243 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 243 (617)
.-|.+|..+.+......+++.|.|..+.... .-.-.|+|.... ...+.. . .. ..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v--~~---------------~~ 169 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----V--NL---------------SS 169 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----E--EE---------------SS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----E--Ee---------------cC
Confidence 3578888877766655678999998874211 012346666553 122211 0 00 01
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecC-CCC---ccceeeEEEEcCCCC
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLH-NGS---YVWSKIYSFRASPYP 286 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~-dg~---~~~S~~~~F~T~p~~ 286 (617)
....+.+.+|+||++|..||..... .+. ..||....|+|++.+
T Consensus 170 t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 170 TKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred ceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 2234567899999999999998752 222 256778899997653
No 145
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=94.61 E-value=0.3 Score=52.73 Aligned_cols=143 Identities=12% Similarity=0.169 Sum_probs=77.4
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHH-HHHHH---------hcCCCcEEEEcCccccCCCc------------
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTT-DQLIR---------DLSNIDIVFHIGDITYANGY------------ 347 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~-~~l~~---------~~~~pDfvl~~GDi~Y~~g~------------ 347 (617)
...++++++|++.+..... + ...++.+ +.|.. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~~--~----~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGE--S----LLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCHH--H----HHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCccc--c----hHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 3468999999999753110 0 0011222 22221 12468899999999965321
Q ss_pred -------HhHHHHHHHhhhhhhcCCCeEEcccCCCCCCCCCCCccCCCCCCCccCccccc---eeccCCCCCCCeEEEEE
Q 007133 348 -------ISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAET---MFYVPAENRAKFWYSTD 417 (617)
Q Consensus 348 -------~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~g~~y~~~ds~ge~g~~~~~---~f~~P~~~~~~~yYsfd 417 (617)
....+++.+.+..+.+.+|+.+.|||||--... . ....-.+|-.+-.. .+..- .|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~---l--PQqplh~~lfp~s~~~~~~~~v----tNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT---L--PQQPLHPCMFPLATAYSTLQLV----TNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS---S--SCCCCCTTSCHHHHTSTTEEEC----CSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccccc---C--CCCCcCHHHhhhhhhcCccEEe----CCC-eEEE
Confidence 123344555566677899999999999964210 0 00000111111000 01111 233 5689
Q ss_pred eCCEEEEEEeCCC--C---CCCCHHHHHHHHHHHHh
Q 007133 418 YGMFHFCIADTEH--D---WREGSEQYRFIEQCLAS 448 (617)
Q Consensus 418 ~G~v~fi~LDt~~--~---~~~g~~Q~~WL~~~L~~ 448 (617)
+++++|++..... + +.+.+.-.+.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999998775432 1 22334556788888875
No 146
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=94.59 E-value=0.17 Score=48.78 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=58.1
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCC----CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDIS----EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-+.+|.-+++.... .+.+.|+|....... .-.-.|+|...+. .+.. ....+. ....
T Consensus 105 k~~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~-~~~~~~-----------------~~~~ 164 (214)
T 2b5i_B 105 RLMAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEE-APLLTL-----------------KQKQ 164 (214)
T ss_dssp CCCCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTT-SCCEEE-----------------CSCC
T ss_pred CCCCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhe-eeeeee-----------------cccc
Confidence 34678777775443 468999998874310 0123466665432 1111 111111 1123
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCC-C---ccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNG-S---YVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg-~---~~~S~~~~F~T~p~ 285 (617)
+.+.|.+|+||++|..||......| . ..||+...|+|.|.
T Consensus 165 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 165 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred eEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 4677899999999999999874322 2 36788899999875
No 147
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.49 E-value=0.17 Score=41.23 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=47.5
Q ss_pred CCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecC
Q 007133 173 APLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKN 252 (617)
Q Consensus 173 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~g 252 (617)
+|..+++. ..+.++++|+|.-... .-..-.|+|...++... . .+.. ..+-...++|+|
T Consensus 4 ~P~~l~~~-~~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~-------~-----~~~~--------~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH-------E-----LFPA--------PDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEE-------E-----ECCC--------CCSSCCEEEECS
T ss_pred CCCccEEE-eecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc-------e-----EEec--------CCCCccEEEeCC
Confidence 56666653 3346899999966531 11223566765432100 0 0000 012235678999
Q ss_pred CCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 253 LWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 253 L~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
|+||++|.++|......|... .....++|.
T Consensus 62 L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~ 91 (94)
T 1j8k_A 62 LRPGSEYTVSVVALHDDMESQ-PLIGTQSTA 91 (94)
T ss_dssp CCCCSEEEEEEEECSSSCCCC-CEEEEEECC
T ss_pred CCCCCEEEEEEEEEcCCCcCC-CEEeEEEec
Confidence 999999999998753333211 123455554
No 148
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=94.42 E-value=0.17 Score=48.04 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=49.2
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCCC-CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISE-AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~-~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
.-|.+|..+.+......+++.|.|..+..... -.-.|+|...+. ..+... .. ......
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~------~~--------------~~~~~~ 167 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMY------EV--------------YDAKSK 167 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEE------EE--------------CC---C
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEE------ec--------------ccCcce
Confidence 36788888877655457899999987643110 123456655431 111110 00 001123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCcccee
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSK 276 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~ 276 (617)
.+.|.+|+|||+|..||......|...||+
T Consensus 168 ~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 168 SVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp EEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred eEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 578999999999999999875445555664
No 149
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=94.37 E-value=0.047 Score=56.98 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=41.5
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIA--STVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 368 (617)
+++++||+|.. ...+.++++.. ...+-++++||+++. |..+. +.+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~VDR-G~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVDR-GYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSSS-STTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCccCC-CcChH--HHHHHHHHhhhhcCCcEE
Confidence 49999999754 34456666542 346789999999954 43321 1222222221 123488
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
No 150
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=94.33 E-value=0.19 Score=43.26 Aligned_cols=74 Identities=22% Similarity=0.335 Sum_probs=43.9
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|....+. ..+.++++|.|....+ .-..-.|+|...++... ...... ++-...++|
T Consensus 4 P~~P~~L~v~-~~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVV-AATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEE-EEETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4566666653 3347899999987632 11234577776543210 001111 112345789
Q ss_pred cCCCCCcEEEEEEeee
Q 007133 251 KNLWPNTVYTYRIGHL 266 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~ 266 (617)
+||+|+|.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999765
No 151
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=94.07 E-value=0.14 Score=51.45 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=57.9
Q ss_pred CCCCCccceEeec-CCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQG-KSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+... .+.++++|+|........ ..-.|+|...+...+...... + ..+-..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 4667777766432 357899999987643110 123466665543322211100 0 012234
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCc---cceeeEEEEcCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSY---VWSKIYSFRASP 284 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~---~~S~~~~F~T~p 284 (617)
..+|++|+|+|.|.+||......|.. .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56899999999999999876444443 456788898864
No 152
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=94.06 E-value=0.24 Score=46.22 Aligned_cols=90 Identities=16% Similarity=0.296 Sum_probs=50.5
Q ss_pred CCccceEee-cCCCCcEEEEEEeCCCCCCCCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 173 APLYPRLAQ-GKSWDEMTVTWTSGYDISEAAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 173 ~P~~~~La~-~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
.|..+.+.. +...++++|.|....+..-..-.|+|..... ..+. .... ++-...+.|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATI-----------------PGHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCE----EEEE-----------------CTTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceE----EEec-----------------CCCccEEEe
Confidence 355555422 1227899999998632111234566765432 1111 1111 111236789
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
+||+|++.|.++|......|...++ ...|+|.+
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~~ 93 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTTS 93 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEE-EEEEEECC
T ss_pred cCCCCCCEEEEEEEEEecccccCce-eEEEecCC
Confidence 9999999999999876444443333 45676643
No 153
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=94.02 E-value=0.15 Score=42.60 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=43.4
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCC-CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISE-AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
.+|...++. ..+.++++|.|..+..... ..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v~-~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEVV-AATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEEE-EEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEEe-ecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 356666652 3357899999987642111 123567765432210 001111 112246789
Q ss_pred cCCCCCcEEEEEEeeec
Q 007133 251 KNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~ 267 (617)
+||+||++|.++|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998753
No 154
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=93.98 E-value=0.23 Score=47.89 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=26.5
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
+++||+|+|.|.|+|.....+|...-++...+||.
T Consensus 203 t~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 203 TFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 57999999999999998766665443455666663
No 155
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=93.98 E-value=0.15 Score=44.45 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=44.0
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
+.+|..+.+. ..+.+++.|.|.-... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEE-EECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEE-ecCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4566666663 3457899999987632 11223566765433210 000111 112346789
Q ss_pred cCCCCCcEEEEEEeee
Q 007133 251 KNLWPNTVYTYRIGHL 266 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~ 266 (617)
+||+|||+|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
No 156
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=93.96 E-value=0.16 Score=49.00 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=56.5
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC---CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE---AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+......+++.|.|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4678888777654347899999988743110 12356666443322211 0000 01123
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCC------ccceeeEEEEcC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGS------YVWSKIYSFRAS 283 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~------~~~S~~~~F~T~ 283 (617)
.+.|.+|+||++|..||.... +|. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~-~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARM-AEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEE-CTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeE-CCCCCCCcCCCCCCCEEEECc
Confidence 567899999999999999873 221 357788889883
No 157
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=93.95 E-value=0.18 Score=47.44 Aligned_cols=96 Identities=17% Similarity=0.246 Sum_probs=50.3
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCC-CcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGD-LQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
+.+|..|.+.. .+.++++|.|.-...... ..-.|+|...+. ..+........+. .+... ...+-...
T Consensus 2 ~~pP~~~~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~------~~~~~---~~~~~~~~ 71 (214)
T 2ibg_A 2 TYPPTPPNVTR-LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYG------KPKWN---SELGKSFT 71 (214)
T ss_dssp CCCCCCCEEEE-EETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECC------SSSCS---SSSEEEEE
T ss_pred CCCCCCCEeeE-ecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCcc------ccccc---cccCccee
Confidence 45677777733 357899999987643110 112355554332 2222111111100 00000 01124566
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCcccee
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSK 276 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~ 276 (617)
..+++|+|++.|.|||......|...+|.
T Consensus 72 ~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~ 100 (214)
T 2ibg_A 72 ASVTDLKPQHTYRFRILAVYSNNDNKESN 100 (214)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCEEECC
T ss_pred EEecCCcCCCEEEEEEEEEecCCCCCCCC
Confidence 78999999999999998754344433443
No 158
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=93.89 E-value=0.18 Score=51.63 Aligned_cols=93 Identities=15% Similarity=0.027 Sum_probs=50.9
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
|.+|..+.+......++++|.|....+..-..-.|+|...++..... ..... .+......+
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45677777654333346999998864311123456666543321100 00001 112345689
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
++|+|++.|.|+|...... +.|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999875322 2344444444443
No 159
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=93.86 E-value=0.3 Score=49.66 Aligned_cols=92 Identities=11% Similarity=0.127 Sum_probs=53.8
Q ss_pred CCCCCccceEeecC-CCCcEEEEEEeCCCCCCC----CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCe
Q 007133 170 NPKAPLYPRLAQGK-SWDEMTVTWTSGYDISEA----APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGF 244 (617)
Q Consensus 170 ~~~~P~~~~La~~~-~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 244 (617)
-|.+|..+.+.... +.+++.|+|..+...... .-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 46677777665543 357999999987532111 12466665543332211 00 011
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCcc---ceeeEEEEc
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYV---WSKIYSFRA 282 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~---~S~~~~F~T 282 (617)
.....|.+|+|++.|.+||......|... ||+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 23567899999999999999874334443 455555544
No 160
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=93.77 E-value=0.23 Score=41.29 Aligned_cols=71 Identities=20% Similarity=0.179 Sum_probs=41.2
Q ss_pred CccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCC
Q 007133 174 PLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNL 253 (617)
Q Consensus 174 P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL 253 (617)
|....+ ...+.++++|+|....+ .-..-.|+|...+..... ...... +-.-.++|+||
T Consensus 5 P~~l~v-~~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~~-----------------~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVV-SEVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGEA---INLTVP-----------------GSERSYDLTGL 62 (98)
T ss_dssp CEEEEE-ESCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSCC---EEEEEE-----------------TTCSEEEECSC
T ss_pred CCceEE-EecCCCeEEEEecCCcC-ccceEEEEEEECCCCCce---EEEEcC-----------------CCcCEEEECCC
Confidence 444444 23457999999987642 111235677754321100 001111 11235789999
Q ss_pred CCCcEEEEEEeee
Q 007133 254 WPNTVYTYRIGHL 266 (617)
Q Consensus 254 ~Pgt~Y~Yrv~~~ 266 (617)
+|+|.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999875
No 161
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.74 E-value=0.24 Score=43.06 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+++... . ++++|+|.-....+. ..-.|+|... ... ..... -++-....
T Consensus 28 P~~P~~l~~~~~-~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~~------~~~~~---------------~~~~~~~~ 83 (126)
T 1x5i_A 28 PEVPSSLHVRPL-V-TSIVVSWTPPENQNIVVRGYAIGYGIG-SPH------AQTIK---------------VDYKQRYY 83 (126)
T ss_dssp CCSCSEEEEEEE-T-TEEEEEEECCSCTTBCCCEEEEEECSS-CGG------GEEEE---------------CCTTCCEE
T ss_pred CCCCCeeEEEec-C-CEEEEEEcCCCCCCCCEeEEEEEEEcC-CCC------ceEEE---------------eCCCeeEE
Confidence 455666666443 3 899999987642110 1123555421 100 00000 01223456
Q ss_pred EecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 249 FLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
+|++|+|+++|.++|......|...++.. .++|.+
T Consensus 84 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~ 118 (126)
T 1x5i_A 84 TIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRP 118 (126)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCccCcceee-EEeccc
Confidence 89999999999999987644444334432 355544
No 162
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.70 E-value=0.11 Score=56.33 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=42.6
Q ss_pred eEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhcC---CCcEEEEcCccccCCCcHhHHHHHHHhhhh--hhcCCC
Q 007133 292 QRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDLS---NIDIVFHIGDITYANGYISQWDQFTAQVEP--IASTVP 366 (617)
Q Consensus 292 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~--l~~~vP 366 (617)
.|++++||+|.. ...+.++++... ..|.++++||+++. |..+ .+.+..+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdr-G~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEeccccCC-Ccch--HHHHHHHHHHHhhCCCc
Confidence 689999999853 345666666532 23569999999954 4322 112222221 122457
Q ss_pred eEEcccCCCCC
Q 007133 367 YMIGSGNHERD 377 (617)
Q Consensus 367 ~~~v~GNHD~~ 377 (617)
++.++||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
No 163
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=93.68 E-value=0.1 Score=51.61 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=31.1
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
...+|+||+||+.|.++|......| ..+|+...|+|+|
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998765555 4678899999975
No 164
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.65 E-value=0.31 Score=40.33 Aligned_cols=83 Identities=17% Similarity=0.402 Sum_probs=50.2
Q ss_pred CccceEeecC-CCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccC---CCeEEEEE
Q 007133 174 PLYPRLAQGK-SWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD---PGFIHTSF 249 (617)
Q Consensus 174 P~~~~La~~~-~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~---~g~~h~v~ 249 (617)
|.|..++-.. ..++-.|.|.......-..-.+.|+.+... .-|++ |+....-+
T Consensus 8 pa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~-----------------------g~Wke~~Ip~h~nSYt 64 (98)
T 1oww_A 8 PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV-----------------------GRWKEATIPGHLNSYT 64 (98)
T ss_dssp CCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS-----------------------SCCEEEEECSSCCEEE
T ss_pred ceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC-----------------------CceeEEEecCccceEE
Confidence 4444443322 378999999987431001223444443321 01322 56677778
Q ss_pred ecCCCCCcEEEEEEeeecCCCCcccee--eEEEEc
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSK--IYSFRA 282 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~--~~~F~T 282 (617)
|+||+||..|+=+|-+... .+|++ .+.|.|
T Consensus 65 I~GL~P~~~YE~qv~S~~r---yG~~Evs~f~FtT 96 (98)
T 1oww_A 65 IKGLKPGVVYEGQLISIQQ---YGHQEVTRFDFTT 96 (98)
T ss_dssp ECSCCSSEEEEEEEEEEES---SSCEEEEEEEEEE
T ss_pred EecCCCCcEEEEEEEEeec---cCcccceEEEEEe
Confidence 9999999999999988753 45664 566665
No 165
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=93.64 E-value=0.068 Score=58.21 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=41.1
Q ss_pred EEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc--CCCcEEEEcCccccCCCcHhHHHHHHHhhhhhh--cCCCeE
Q 007133 293 RVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL--SNIDIVFHIGDITYANGYISQWDQFTAQVEPIA--STVPYM 368 (617)
Q Consensus 293 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 368 (617)
+++++||+|.. ...+.++++.. ...+-++++||+++. |..+ -+.+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq---------------~~dL~~LL~~~g~p~~d~yVFLGDyVDR-Gp~S--~Evl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVDR-GYFS--IECVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSSS-SSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC---------------HHHHHHHHHhcCCCCcceEEEcCCcCCC-CCCH--HHHHHHHHHHhhhCCCeEE
Confidence 58999999753 34455665532 345889999999954 4322 11222222221 123488
Q ss_pred EcccCCCCC
Q 007133 369 IGSGNHERD 377 (617)
Q Consensus 369 ~v~GNHD~~ 377 (617)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
No 166
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=93.27 E-value=0.27 Score=53.71 Aligned_cols=131 Identities=16% Similarity=0.146 Sum_probs=74.4
Q ss_pred cceEEEEEEeecccceEEEEEeC-CCCCcEEEEEcCcccc-----cCCCCCccceEeecCCCCcEEEEEEeCCCCCCC--
Q 007133 130 GKATLNFRLINQRSDFSFGLFSG-GLSNPKLVAVSNSITF-----ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISEA-- 201 (617)
Q Consensus 130 g~~~~~~~l~n~r~~~~f~~~~~-~~~~~~~~a~s~~~~~-----~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~-- 201 (617)
+..+.+|.+...-..|.|.+.+- ++.. ..| .+.| .-|.+|..+.+. ..+.+++.|+|..+... ..
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~----~~S-~~~~~~~~~v~P~PP~nl~v~-~~s~~sl~LsW~pP~~~-~g~~ 417 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ----AQS-AVVINVTERVAPHDPTSLKVK-DINSTVVTFSWYLPGNF-TKIN 417 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE----EEE-EEECCGGGTBCCCCCEEEEEE-ECSTTCEEEEEEEEEEC-SSSE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC----ccc-eEEEEecCCCCCCCCeEEEEE-ecCCCEEEEEEeCCCCC-CCcc
Confidence 34566666654336677777653 2221 111 1222 246677766653 33578999999876321 11
Q ss_pred -CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCC---ccceee
Q 007133 202 -APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGS---YVWSKI 277 (617)
Q Consensus 202 -~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~---~~~S~~ 277 (617)
.-.|+|...+...+.. ..+.. + ...-.+.+.|.+|+|+|+|..||.... .|. ..||+.
T Consensus 418 l~YeV~Yr~~~~~~w~~---~~~~~------------~--~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~ 479 (488)
T 2q7n_A 418 LLCQIEICKANSKKEVR---NATIR------------G--AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDE 479 (488)
T ss_dssp EEEEEEEBCTTSCCEEE---EEEEE------------C--CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCC
T ss_pred eEEEEEEEECCCCCceE---EEEEe------------c--CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCC
Confidence 1235565543321110 01110 0 011356679999999999999999876 555 367778
Q ss_pred EEEEcCCC
Q 007133 278 YSFRASPY 285 (617)
Q Consensus 278 ~~F~T~p~ 285 (617)
..|+|++.
T Consensus 480 v~~~T~e~ 487 (488)
T 2q7n_A 480 KRHLTTEA 487 (488)
T ss_dssp CCBCCCCC
T ss_pred EeEECCCC
Confidence 88998764
No 167
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=93.10 E-value=0.15 Score=42.16 Aligned_cols=74 Identities=18% Similarity=0.266 Sum_probs=44.1
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
+.+|...++. ..+.++++|.|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVV-AATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEE-EEETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4567776663 3357899999986532 11123566765433210 001111 112346789
Q ss_pred cCCCCCcEEEEEEeee
Q 007133 251 KNLWPNTVYTYRIGHL 266 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~ 266 (617)
+||+|+++|.++|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
No 168
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=93.06 E-value=0.47 Score=46.58 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=57.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
-|.+|..+.+. ..+.++++|.|.-... ....-.|+|+........ ..... ++......
T Consensus 14 ~p~~P~~l~~~-~~~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILVR-DVSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEEE-ecCCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 34567776653 3346899999987641 112346777543221100 00111 11234567
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCCCCCceEEEEEee
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPGQDSLQRVVIFGD 299 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 299 (617)
|++|+|++.|.++|......|... .....|+|+|.+.. .+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P~--~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAPK--NLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCE--EEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCCC--ceEEEecCC
Confidence 899999999999998764332211 23456777765432 245444433
No 169
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=93.01 E-value=0.21 Score=41.86 Aligned_cols=75 Identities=17% Similarity=0.304 Sum_probs=44.4
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCC--CCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDI--SEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
+.+|...++. ..+.++++|.|.-.... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~-~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVV-DATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEE-EEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEE-ecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 4567776663 34578999999776421 01122567765432110 000111 1123567
Q ss_pred EecCCCCCcEEEEEEeee
Q 007133 249 FLKNLWPNTVYTYRIGHL 266 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~ 266 (617)
+|+||+|+++|.++|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999876
No 170
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=92.66 E-value=0.71 Score=45.19 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|..+.+ ...+.++++|.|.-..+ ....-.|+|...++.... ...... +.+-.....
T Consensus 104 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEE-EecCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 4567766665 33357899999987642 112345667654332210 111110 011256778
Q ss_pred ecCCCCCcEEEEEEeeecCCCCcccee--eEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSK--IYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~--~~~F~T~p~ 285 (617)
|++|+|++.|.++|......| .|. ...+.+.|.
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELD 198 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCC
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCC
Confidence 999999999999998763332 343 344555554
No 171
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.55 E-value=0.057 Score=45.49 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=43.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
.|.+|..+++. ..+.++++|.|.-... .-..-.|+|......... .... -++-...++
T Consensus 7 ~p~~P~~l~v~-~~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~~---~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALA-SETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGPE---KSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEE-EEETTEEEEEEECCSS-CCSBBCBBCCCTTSCSCC---CCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEE-eCCCCEEEEEEeCCCC-cceEEEEEEEECCCCCcc---EEEE-----------------eCCCcCEEE
Confidence 45677777763 3347899999988632 111234445433221000 0000 012235668
Q ss_pred ecCCCCCcEEEEEEeeec
Q 007133 250 LKNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~ 267 (617)
|+||+|+|+|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
No 172
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=92.48 E-value=0.35 Score=46.56 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=58.1
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCC-------CCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccC
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDI-------SEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD 241 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 241 (617)
.-|.+|..+.+. . .+.+.|.|..+... ..-.-.|+|...++ .+.......... .
T Consensus 99 Vkp~PP~nltv~--~-~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------~ 159 (219)
T 3tgx_A 99 IKPAPPFDVTVT--F-SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------V 159 (219)
T ss_dssp BCCCCCEEEEEE--E-SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC---------------S
T ss_pred EEeCCCCceEEE--e-CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe---------------c
Confidence 357788866654 2 46999999986431 01124566665542 221110000000 0
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCCCC---c---cceeeEEEEcCCCC
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHNGS---Y---VWSKIYSFRASPYP 286 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~---~---~~S~~~~F~T~p~~ 286 (617)
.+....+.+.+|+||++|..||......|. . .||+...|+|++..
T Consensus 160 ~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 160 DSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 123456678899999999999998754332 2 46888999998753
No 173
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=92.33 E-value=0.4 Score=52.21 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=74.8
Q ss_pred ceEEEEEEeecccceEEEEEeC-CCCC-cEEEEEcCcccccCCCCCccceEeecCCCCcEEEEEEeCCCCC--CCCCEEE
Q 007133 131 KATLNFRLINQRSDFSFGLFSG-GLSN-PKLVAVSNSITFANPKAPLYPRLAQGKSWDEMTVTWTSGYDIS--EAAPFVE 206 (617)
Q Consensus 131 ~~~~~~~l~n~r~~~~f~~~~~-~~~~-~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~ 206 (617)
..+..|........|.|.+... ++.. +..+.. .......|.+|..+.+. ..+.+++.|+|..+.... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~-~~~~~VkP~PP~nl~v~-~~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILV-NITEKVYPHTPTSFKVK-DINSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEE-CGGGGBCCCCCEEEEEC-CSSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEE-EeccccCCCCCeeeEEE-EecCCeEEEEECCCCCCCCceEEEEEE
Confidence 3456666555555677766653 2221 000111 11112356777776663 234789999998864211 0235688
Q ss_pred EeccCCCc-ceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCC---ccceeeEEEEc
Q 007133 207 WGLKGDLQ-MHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGS---YVWSKIYSFRA 282 (617)
Q Consensus 207 yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~---~~~S~~~~F~T 282 (617)
|...+... +.. .++. + ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~-----~---------~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ-----G---------VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB-----C---------CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe-----c---------cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 87654321 110 0000 0 00123456799999999999999987 4554 46778888988
Q ss_pred CCC
Q 007133 283 SPY 285 (617)
Q Consensus 283 ~p~ 285 (617)
+.+
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 174
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=91.91 E-value=0.57 Score=48.01 Aligned_cols=89 Identities=15% Similarity=-0.002 Sum_probs=48.8
Q ss_pred CCCccceEeecCCCC-cEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 172 KAPLYPRLAQGKSWD-EMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 172 ~~P~~~~La~~~~~~-~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
.+|..+.+.. .+.+ +++|.|.-........-.|+|...++..... ...... +......|
T Consensus 4 ~~P~~l~~~~-~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~~-----------------~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEA-NPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVVH-----------------ADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEE-ETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEEE-----------------TTCCEEEE
T ss_pred CCCCccEEEe-cCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEcC-----------------CCccEEEE
Confidence 3565565533 2356 9999998764211122356676543321100 000111 12345678
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
++|+|++.|.++|..... .+.|.....++.
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~ 93 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTII 93 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEEC
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEc
Confidence 999999999999987632 234554455443
No 175
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=91.65 E-value=0.2 Score=55.03 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=58.5
Q ss_pred CCCCCccceEee-cCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQ-GKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|.+|..+.+.. ....++++|.|........ ..-.|+|...++..+...... ...+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~------------------~~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------------------DTASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT------------------SSCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc------------------cCcCcee
Confidence 467787777743 3357899999986532110 113456665543322211000 0012234
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCcc---ceeeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYV---WSKIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~---~S~~~~F~T~p~ 285 (617)
...+++|+|++.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 567899999999999999765445433 467777888764
No 176
>2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens}
Probab=91.23 E-value=1.8 Score=37.57 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=55.1
Q ss_pred eCCCceEEEecc--ccccCCCcccEEEEEEeC-CCCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccCCceeeeccc
Q 007133 45 FHDSASIRAHPV--LLGLKGEDTQWVTVSLVS-PHPSADDWLGVFSPAKFNSSSCPPVNDPKEQAPYICSAPIKYKYANE 121 (617)
Q Consensus 45 ~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~-~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 121 (617)
.++-.+|++|.. +||. +|.+.|.|.- ..-.+.||||+|--.. .||.+- +.|+--
T Consensus 31 ~~sRSsLt~S~~~ytiG~----~q~lvI~WDIKEev~a~DWIGLy~ide----~~~~n~-------------ld~knR-- 87 (138)
T 2lfe_A 31 SESRSSLTASMYEYTLGQ----AQNLIIFWDIKEEVDPSDWIGLYHIDE----NSPANF-------------WDSKNR-- 87 (138)
T ss_dssp --CCCEEEESCSEEETTC----SCCEEEEEECCSCCCTTCEEEEEECCS----SCTTCC-------------CEECCT--
T ss_pred ccccceeEEEeeEEEecC----CCcEEEEEeccCccCccceEEEEEecC----CCccch-------------hhhhcc--
Confidence 345567777654 4543 3569999997 4788999999997643 334331 222211
Q ss_pred cCcccccccceEEEEEEee----c--ccceEEEEEeCCCCCcEEEEEcCcccccCC
Q 007133 122 SNSDYTKTGKATLNFRLIN----Q--RSDFSFGLFSGGLSNPKLVAVSNSITFANP 171 (617)
Q Consensus 122 ~~~~~~~~g~~~~~~~l~n----~--r~~~~f~~~~~~~~~~~~~a~s~~~~~~~~ 171 (617)
+-..+=+|.+.-++=. + +.-+-|.+..+-.. .|-|.++.|+..||
T Consensus 88 ---gvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 88 ---GVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp ---TCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred ---ccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 1112223444333211 2 22345666665433 58888888877765
No 177
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.08 E-value=0.47 Score=40.53 Aligned_cols=74 Identities=11% Similarity=0.185 Sum_probs=42.5
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEE
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTS 248 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v 248 (617)
|.+|..+++... + ++++|+|.-....+. ..-.|+|....... ...... +-....
T Consensus 18 P~~P~~l~~~~~-~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~~-----------------~~~~~~ 73 (116)
T 2edb_A 18 PDQPSSLHVRPQ-T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRVD-----------------SKQRYY 73 (116)
T ss_dssp CCCCSCEEEEEC-S-SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEEE-----------------TTCCEE
T ss_pred CCCCCCeEEEEC-C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEeC-----------------CCeeEE
Confidence 556766666433 4 899999987632110 11345565321100 001111 122456
Q ss_pred EecCCCCCcEEEEEEeeecC
Q 007133 249 FLKNLWPNTVYTYRIGHLLH 268 (617)
Q Consensus 249 ~l~gL~Pgt~Y~Yrv~~~~~ 268 (617)
+|++|+|+++|.++|.....
T Consensus 74 ~l~~L~p~t~Y~~~V~A~n~ 93 (116)
T 2edb_A 74 SIERLESSSHYVISLKAFNN 93 (116)
T ss_dssp EECSCCSSSBEEEEEEEEET
T ss_pred EeCCCCCCCEEEEEEEEEeC
Confidence 88999999999999987643
No 178
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=91.08 E-value=2.3 Score=43.38 Aligned_cols=93 Identities=17% Similarity=0.140 Sum_probs=51.0
Q ss_pred CCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 171 PKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 171 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
+.+|..+.+ ...+.++++|.|....+.....-.|+|...+.... ...... .+-.....+
T Consensus 187 ~~~p~~l~~-~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 245 (375)
T 3t1w_A 187 VPPPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVL 245 (375)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEEE
T ss_pred CCCCceeEE-EecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEEe
Confidence 446665555 23457899999987532122234566665432110 000111 112345678
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
++|+|++.|.++|......|.... ....++|.|.
T Consensus 246 ~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 246 TNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 999999999999987643332222 2344566554
No 179
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=91.04 E-value=0.71 Score=42.97 Aligned_cols=38 Identities=5% Similarity=-0.064 Sum_probs=27.3
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCcc-ceeeEEEEcC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYV-WSKIYSFRAS 283 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~-~S~~~~F~T~ 283 (617)
...+|++|+|++.|.+||......|... +|+...++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 4567899999999999998765444444 3455666664
No 180
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=90.86 E-value=8.1 Score=37.53 Aligned_cols=68 Identities=21% Similarity=0.259 Sum_probs=39.1
Q ss_pred CCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEEe
Q 007133 185 WDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRIG 264 (617)
Q Consensus 185 ~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~ 264 (617)
.++++|+|.-... ....-.|+|...+..... ...+... .........+++|+|++.|.++|.
T Consensus 114 ~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~ 175 (290)
T 3l5i_A 114 DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC----ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVT 175 (290)
T ss_dssp TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC----CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEE
T ss_pred CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC----CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEE
Confidence 3699999987643 122346777654432110 0001100 012234567899999999999998
Q ss_pred eecCCC
Q 007133 265 HLLHNG 270 (617)
Q Consensus 265 ~~~~dg 270 (617)
.....|
T Consensus 176 A~n~~g 181 (290)
T 3l5i_A 176 PVYADG 181 (290)
T ss_dssp EEETTE
T ss_pred EEeCCc
Confidence 764333
No 181
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=90.81 E-value=0.35 Score=51.81 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=50.2
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEec
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLK 251 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~ 251 (617)
..|...++ ...+.++++|.|..+.+..-..-.|+|.+++.... ....+. ++--.+++|+
T Consensus 371 ~~~~~l~~-~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEV-VAATPTSLLISWDASYSSSVSYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEE-EEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEE-eccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc---ceEEEe-----------------cCCCceEEec
Confidence 45777777 44457899999987622111134566766542110 011111 1123678999
Q ss_pred CCCCCcEEEEEEeeecCCCCccceeeEEE
Q 007133 252 NLWPNTVYTYRIGHLLHNGSYVWSKIYSF 280 (617)
Q Consensus 252 gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F 280 (617)
||+|||+|..+|...... -...|....|
T Consensus 430 ~L~p~t~Y~~~v~a~~~~-~g~~s~~~~~ 457 (461)
T 3csg_A 430 GLSPGVDYTITVYAYSYY-YYYYSSPISI 457 (461)
T ss_dssp SCCTTCEEEEEEEEECTT-SCBCSCCEEE
T ss_pred CCCCCCEEEEEEEEEecc-CCCCCCCEEE
Confidence 999999999999876322 2234544433
No 182
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=90.17 E-value=1.7 Score=44.38 Aligned_cols=93 Identities=23% Similarity=0.243 Sum_probs=55.3
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCC----EEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAP----FVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|.+|..+.+. ....++++|.|..... ..+.+ .|+|...+...+.. .. ..+..
T Consensus 195 ~P~~P~~~~~~-~~~~~~~~l~w~~p~~-~~g~pi~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKII-ELSQTTAKVSFNKPDS-HGGVPIHHYQVDVKEVASEIWKI------VR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEEE-EECSSCEEEEEECCSC-CTTSCEEEEEEEEEETTCSCCEE------EE---------------CSTTC
T ss_pred CCCCCcceEEe-eccCCEEEEEEeCCCC-CCCcceEEEEEEEEECCCcccEE------ee---------------ccCCc
Confidence 34556555542 2346899999985422 11223 35565544322210 00 01123
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
....|++|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998765555556677788888654
No 183
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=89.41 E-value=0.89 Score=42.75 Aligned_cols=91 Identities=15% Similarity=0.234 Sum_probs=53.5
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
-|.+|....+.... .+.+.|.|........-.-.|+|....+..+... .. .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~----~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE----ec------------------cCceEEE
Confidence 47788877665543 4799999998742111234577876544333211 00 0123556
Q ss_pred ecCCCCCcEEEEEEeeecCC---CCc---cceeeEEEEcC
Q 007133 250 LKNLWPNTVYTYRIGHLLHN---GSY---VWSKIYSFRAS 283 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~d---g~~---~~S~~~~F~T~ 283 (617)
|.+|+|+++|..||...... +.. .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 79999999999999987532 122 45556666653
No 184
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.71 E-value=0.74 Score=39.45 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=29.8
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45566 99999999999877666666788888899865
No 185
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=88.69 E-value=0.99 Score=45.39 Aligned_cols=105 Identities=19% Similarity=0.226 Sum_probs=56.6
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCC--CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISE--AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
-|.+|..+++.. ..+++.|.|..+..... -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~~--~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLSF--HNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEEE--ETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEEE--cCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 467787777653 35799999998743111 12346666554332210 0110112221000 000123567
Q ss_pred EEecCCCCCcEEEEEEeeecC------CCC-ccceeeEEEEcCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLH------NGS-YVWSKIYSFRASP 284 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~------dg~-~~~S~~~~F~T~p 284 (617)
+.|.+|+|+++|.+||..... .|. ..||+...|.+.+
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 789999999999999998742 232 3566667775543
No 186
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=88.47 E-value=1.2 Score=43.61 Aligned_cols=93 Identities=15% Similarity=0.206 Sum_probs=55.1
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSF 249 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~ 249 (617)
-|.+|....+.... .+.+.|.|........-.-.|+|...++..+... .. .......
T Consensus 136 kP~PP~nl~v~~~~-~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~----~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEESS-SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE----EE------------------CSSCEEE
T ss_pred EeCCCCeEEEEECC-CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE----ec------------------CCceEEE
Confidence 47788877665443 4799999998743111123477776544333211 00 0113456
Q ss_pred ecCCCCCcEEEEEEeeecCCC---Cc---cceeeEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNG---SY---VWSKIYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg---~~---~~S~~~~F~T~p~ 285 (617)
|.+|+|+++|..||......+ .. .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 799999999999999875321 22 4667778877543
No 187
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=87.61 E-value=2.7 Score=47.42 Aligned_cols=42 Identities=17% Similarity=0.262 Sum_probs=31.3
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCccceee---EEEEcCCC
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKI---YSFRASPY 285 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~---~~F~T~p~ 285 (617)
-...++|+||+|++.|.+||......|...+|.. ..++|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987654454455654 77888654
No 188
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=87.55 E-value=2.1 Score=48.43 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=25.8
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCcc-ceeeEEEEcC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYV-WSKIYSFRAS 283 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~-~S~~~~F~T~ 283 (617)
.++|++|+|++.|.|||......|... .+....|+|.
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 467899999999999998764444222 2345567763
No 189
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=87.41 E-value=0.96 Score=50.24 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=49.0
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCC----CEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAA----PFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|.+|..|.+.- .+.+++++.|.-+.. +.+. -.||+...++..|...+.+ ++.
T Consensus 9 ~P~pP~~P~v~~-~~~~sv~L~W~~P~~-DGgs~I~~Y~vE~~~~~~~~W~~v~~~------------------~~t--- 65 (573)
T 3uto_A 9 EPEPPRFPIIEN-ILDEAVILSWKPPAL-DGGSLVTNYTIEKREAMGGSWSPCAKS------------------RYT--- 65 (573)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSC-CSSSCCCEEEEEEEESSSCCCEEEEEE------------------SSS---
T ss_pred CCccCCCCEEEE-eeCCEEEEEECCCCc-CCCCcccEEEEEEEECCCCceEEeccc------------------cCC---
Confidence 477888887633 346899999987632 1122 3577777776666433210 011
Q ss_pred EEEEecCCCCCcEEEEEEeeec
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~ 267 (617)
..+++||.||+.|.|||....
T Consensus 66 -~~~V~~L~~g~~Y~FRV~A~N 86 (573)
T 3uto_A 66 -YTTIEGLRAGKQYEFRIIAEN 86 (573)
T ss_dssp -EEEECCCCTTCEEEEEEEEEE
T ss_pred -EEEeCCCCCCCcEeEEEEEEc
Confidence 246899999999999998763
No 190
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=87.18 E-value=0.38 Score=38.60 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=27.8
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
||-.+.-+|.||+||.+|.=++.+-...|... ...+.|+|.
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g~~E-vtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTSCCC-EEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecccCC-ceEEEEEec
Confidence 45556668999999999999998764433321 245666653
No 191
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=86.99 E-value=5.6 Score=44.95 Aligned_cols=96 Identities=11% Similarity=0.004 Sum_probs=54.3
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCC----CCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEE
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDI----SEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHT 247 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 247 (617)
.+|..+.+. ..+.++++|+|.-.... ....-.|+|............ ... + ..++....
T Consensus 361 ~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~---~~~---~----------~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEVV-EVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE---EVS---W----------DTENSHPQ 423 (731)
T ss_dssp CCCEEEEEE-EECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEE---EEE---C----------CSSCSSCE
T ss_pred CCCceeEEE-eccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccce---eEE---E----------EecCCcce
Confidence 456655553 33578999999875210 001235777654322110000 000 0 00122345
Q ss_pred EEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 248 SFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 248 v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
.+|++|+|++.|.++|......|.. .|....++|.+.
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~~ 460 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDED 460 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccCC
Confidence 6899999999999999876544543 477788888643
No 192
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=86.96 E-value=1.1 Score=42.53 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=49.2
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCC-C----CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCC
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDI-S----EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPG 243 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 243 (617)
.-|.+|....+.... .+...|+|...... . .-.-.|+|...++..... ..... ..+
T Consensus 96 Vkp~PP~nl~~~~~~-~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-----~~~~~-------------~~~ 156 (207)
T 1iar_B 96 VKPRAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNVT-------------YLE 156 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEEC-------------SSC
T ss_pred cccCCCCCeEEEEcc-CCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-----eeeee-------------cCC
Confidence 357788777765433 46899999887431 0 012456676543321100 01000 012
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCc---cceeeEEEEcCCC
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSY---VWSKIYSFRASPY 285 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~---~~S~~~~F~T~p~ 285 (617)
......+.+|.||++|..||......... .||....|+|.+.
T Consensus 157 ~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 157 PSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred cEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 34556678999999999999987432222 5677889998764
No 193
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=86.58 E-value=4.5 Score=42.42 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=54.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCC--------CCEEEEeccCCCcceecccceEEeecccCCCCCccccccC
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEA--------APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRD 241 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 241 (617)
-|.+|..+.+.... +.+.|+|..+...... .-.|+|+..+ ..+.... +...
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~---~~~~--------------- 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAA---ILLS--------------- 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCE---EEEE---------------
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhee---eecc---------------
Confidence 57788887775543 6999999987542110 1245555443 2221110 0000
Q ss_pred CCeEEEEEecCCCCCcEEEEEEeeecCC---CCc---cceeeEEEEcCCCC
Q 007133 242 PGFIHTSFLKNLWPNTVYTYRIGHLLHN---GSY---VWSKIYSFRASPYP 286 (617)
Q Consensus 242 ~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~d---g~~---~~S~~~~F~T~p~~ 286 (617)
....+.+.+.+|.|+++|..||...... +.. .||+...|+|++..
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~ 217 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 217 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc
Confidence 1122333344999999999999976421 223 45688899998764
No 194
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=85.65 E-value=5 Score=40.30 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=29.8
Q ss_pred EEEEecCCCCCcEEEEEEeeec--CCCCccceeeEEEEcCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLL--HNGSYVWSKIYSFRASP 284 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~--~dg~~~~S~~~~F~T~p 284 (617)
...+|.+|+|+|.|..+|.... ..|...+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3578999999999999998653 33455678888888853
No 195
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=85.57 E-value=8.2 Score=40.30 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=29.7
Q ss_pred EEEEecCCCCCcEEEEEEeeec--CCCCccceeeEEEEcCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLL--HNGSYVWSKIYSFRASP 284 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~--~dg~~~~S~~~~F~T~p 284 (617)
...+|++|+|++.|..+|.... ..|...+|+...++|..
T Consensus 163 ~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 163 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp SEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred cEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 3467999999999999998753 23555678777788754
No 196
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=85.42 E-value=5.7 Score=44.88 Aligned_cols=92 Identities=14% Similarity=-0.012 Sum_probs=54.4
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCC--C-CCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDIS--E-AAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIH 246 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 246 (617)
-|..|..|.+.. ...++++|.|....... + ..-.|+|...+.. +.. ... .. ..
T Consensus 261 ~P~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~-~~~------~~~--------------~~--~~ 316 (731)
T 2v5y_A 261 PPVPIAPPQLAS-VGATYLWIQLNANSINGDGPIVAREVEYCTASGS-WND------RQP--------------VD--ST 316 (731)
T ss_dssp CCCBSSCCEEEE-ECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS-CEE------EEE--------------CC--SS
T ss_pred CCCCCCCcceec-cCCceEEEEeCCcccCCCCccEEEEEEEEECCCC-ceE------Eec--------------cC--cc
Confidence 345556666643 35689999997542100 0 1125677654321 110 000 01 14
Q ss_pred EEEecCCCCCcEEEEEEeee--cCCCCccceeeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHL--LHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~--~~dg~~~~S~~~~F~T~p~ 285 (617)
..+|++|+|++.|.|+|... ...|...+|....++|.+.
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 56789999999999999865 4455556777788888654
No 197
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=84.78 E-value=0.57 Score=39.09 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=37.1
Q ss_pred CCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEEEE
Q 007133 184 SWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTYRI 263 (617)
Q Consensus 184 ~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv 263 (617)
+.++++|.|..... .-..-.|+|....+... ...... ++-.-.+.|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~v-----------------~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLDL-----------------PSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEEE-----------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEEC-----------------CCCccEEEECCCCCCCEEEEEE
Confidence 46889999987632 11224566665432110 000111 2334567899999999999998
Q ss_pred eee
Q 007133 264 GHL 266 (617)
Q Consensus 264 ~~~ 266 (617)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 198
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=84.67 E-value=3.1 Score=39.04 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=30.9
Q ss_pred EEEecCCCCCcEEEEEEeeecC--CCCccceeeEEEEcCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLH--NGSYVWSKIYSFRASPY 285 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~--dg~~~~S~~~~F~T~p~ 285 (617)
.++|++|+|+|.|..+|..... .+...||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986542 45557888888988764
No 199
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=83.74 E-value=2.6 Score=46.44 Aligned_cols=42 Identities=12% Similarity=0.031 Sum_probs=30.8
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCC---ccceeeEEEEcCCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGS---YVWSKIYSFRASPYP 286 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~---~~~S~~~~F~T~p~~ 286 (617)
...++|++|+|++.|.++|......|. ..++....++|.|.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 356789999999999999987643332 235677888887654
No 200
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=82.38 E-value=1.8 Score=50.65 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=30.7
Q ss_pred EEEEecCCCCCcEEEEEEee-ecCCCC----ccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGH-LLHNGS----YVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~-~~~dg~----~~~S~~~~F~T~p~ 285 (617)
...+|++|+|+|+|.|||.. ....|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 45789999999999999987 433343 45788888998663
No 201
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=82.33 E-value=1.3 Score=42.68 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=28.4
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASP 284 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p 284 (617)
..++++|+|++.|.|||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999876545555667777787754
No 202
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=82.20 E-value=4.4 Score=42.47 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=27.3
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCC--Cc---cceeeEEEEc
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNG--SY---VWSKIYSFRA 282 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg--~~---~~S~~~~F~T 282 (617)
..+.|.+|+|||+|..||......| .. .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 4578999999999999999875432 23 4666677765
No 203
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=81.93 E-value=2.8 Score=38.64 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=20.5
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNG 270 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg 270 (617)
...+.|+||+||+.|.++|......|
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~~~G 189 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQISEDG 189 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTS
T ss_pred eeEEEeCCCCCCCEEEEEEEEEcCCC
Confidence 34578999999999999998764333
No 204
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=81.45 E-value=12 Score=35.68 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=25.3
Q ss_pred ecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~ 285 (617)
+.+|.|++.|.|||......|...+|++..+.+.+.
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~~ 202 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSK 202 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC---
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCCC
Confidence 568999999999998775556556777766665543
No 205
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=77.66 E-value=4.3 Score=37.71 Aligned_cols=36 Identities=8% Similarity=-0.103 Sum_probs=24.2
Q ss_pred EEEEecCC-CCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 246 HTSFLKNL-WPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 246 h~v~l~gL-~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
..+.|++| +|++.|.++|......|... +....|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~-s~~~~~~~ 98 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDP 98 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECG
T ss_pred ceEEEcCCccccccEEEEEEEEecccCcc-CCcEEecc
Confidence 45689999 99999999998763333221 33455644
No 206
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=75.84 E-value=0.89 Score=49.80 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=30.0
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
...+|+||+||+.|.++|......| ..+|...+|+|+
T Consensus 552 ~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~~~~~T~ 588 (589)
T 3l5h_A 552 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP 588 (589)
T ss_dssp CBCCBCSCCSSCCEECCEEEEETTE-EEECCCCEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCC-CCCCCCeEEecC
Confidence 3457899999999999998775556 567888889885
No 207
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=72.22 E-value=1 Score=52.79 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=32.2
Q ss_pred EEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcCCCCC
Q 007133 247 TSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRASPYPG 287 (617)
Q Consensus 247 ~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~p~~g 287 (617)
.++|++|+|| +|.+||......|...||+...|+|++.+.
T Consensus 852 ~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~ 891 (897)
T 2dtg_E 852 GCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLD 891 (897)
T ss_dssp CCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC-
T ss_pred cEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCC
Confidence 3478999999 699999876556666789999999988654
No 208
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=71.88 E-value=7.3 Score=37.96 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=45.8
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCCCCCCCCEEEEe----ccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYDISEAAPFVEWG----LKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
-|..|..+.+ .....++++|.|..... ....+...|- ..+...+..... ...
T Consensus 198 ~P~~p~~~~~-~~~~~~~v~l~w~~p~~-~g~~~i~~y~v~~~~~~~~~w~~~~~----------------------~~~ 253 (305)
T 2nzi_A 198 VPDPPRGVKV-SDVSRDSVNLTWTEPAS-DGGSKITNYIVEKCATTAERWLRVGQ----------------------ARE 253 (305)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCSC-CSBSCEEEEEEEEEETTSCCEEEEEE----------------------ESS
T ss_pred CCCCCCCcee-eeccCCEEEEEEcCCcc-CCCCceeEEEEEEecCCCCccEECcc----------------------ccC
Confidence 4566666655 33457899999986422 1123444443 222211111000 002
Q ss_pred EEEEecCCCCCcEEEEEEeeecCCCCcccee
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLHNGSYVWSK 276 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~ 276 (617)
...+|++|+|++.|.|||......|...+|.
T Consensus 254 ~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 254 TRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp SEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred ceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 3467899999999999998764334333443
No 209
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=70.21 E-value=5.3 Score=38.22 Aligned_cols=40 Identities=25% Similarity=0.172 Sum_probs=32.1
Q ss_pred EEEEecCCCCCcEEEEEEeeecC--CCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLLH--NGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~~--dg~~~~S~~~~F~T~p~ 285 (617)
+.+.|.+|+|+|.|..+|..... .+...||+...|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 35679999999999999987532 45667899999999765
No 210
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=65.39 E-value=3.6 Score=43.10 Aligned_cols=40 Identities=28% Similarity=0.233 Sum_probs=0.0
Q ss_pred EEEEecCCCCCcEEEEEEeeec----CCCCccceeeEEEEcCCC
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLL----HNGSYVWSKIYSFRASPY 285 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~----~dg~~~~S~~~~F~T~p~ 285 (617)
..++|++|+|++.|..+|.... .+|...+|+...|+|.|.
T Consensus 367 ~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp --------------------------------------------
T ss_pred CeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 4578999999999999998653 135567788888888653
No 211
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=64.15 E-value=2.1 Score=44.71 Aligned_cols=39 Identities=5% Similarity=0.157 Sum_probs=11.3
Q ss_pred EEecC-CCCCcEEEEEEeeecC---CCC---ccceeeEEEEcCCCC
Q 007133 248 SFLKN-LWPNTVYTYRIGHLLH---NGS---YVWSKIYSFRASPYP 286 (617)
Q Consensus 248 v~l~g-L~Pgt~Y~Yrv~~~~~---dg~---~~~S~~~~F~T~p~~ 286 (617)
..|.+ |+|+++|.+||..... .+. ..||+...|+|+..+
T Consensus 292 ~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~~ 337 (380)
T 3lb6_C 292 TYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLS 337 (380)
T ss_dssp CC------------CCEEEEECTTTCSSCCCCCCCCC---------
T ss_pred EEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCCC
Confidence 35788 9999999999987632 111 356788889997643
No 212
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=63.71 E-value=7.6 Score=36.64 Aligned_cols=81 Identities=7% Similarity=-0.046 Sum_probs=46.4
Q ss_pred cCCCCcEEEEEEeCCCCCCCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEecCCCCCcEEEE
Q 007133 182 GKSWDEMTVTWTSGYDISEAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFLKNLWPNTVYTY 261 (617)
Q Consensus 182 ~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l~gL~Pgt~Y~Y 261 (617)
..+.+++.|.|.-... .-.-.|.|..++..... ....+. ..-..++|.+|+|++.|..
T Consensus 118 ~~~~~~i~V~~~~p~~--~l~Y~v~y~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~L~p~t~Ycv 175 (206)
T 4doh_B 118 TKDGFHLVIELEDLGP--QFEFLVAYWRREPGAEE---HVKMVR-----------------SGGIPVHLETMEPGAAYCV 175 (206)
T ss_dssp EEETTEEEEEECCCCT--TCEEEEEEEESSSSCCC---EEEEEC-----------------CSSSEEEEEECCSSSCEEE
T ss_pred EeCCCEEEEEecCCCC--cEEEEEEEEEcCCCcee---EEeEEc-----------------cCCeEEEEeCCCCCCcEEE
Confidence 3457899999975421 12345677665432210 000010 0113578999999999999
Q ss_pred EEeeecC--CCCccceeeEEEEcCC
Q 007133 262 RIGHLLH--NGSYVWSKIYSFRASP 284 (617)
Q Consensus 262 rv~~~~~--dg~~~~S~~~~F~T~p 284 (617)
+|..... ++...+|+..-|.|..
T Consensus 176 ~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 176 KAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EEEEEEGGGTEECCCCCCEEECC--
T ss_pred EEEEEecCCCCCCCCCCCEeEEccc
Confidence 9986431 2444567777777753
No 213
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=62.43 E-value=9.1 Score=42.70 Aligned_cols=106 Identities=17% Similarity=0.257 Sum_probs=54.0
Q ss_pred CCCCCccceE-eecCCCCcEEEEEEeCCCCCCCCCEEEEeccCC-Ccceecccce-----------EEeecccCCCCCcc
Q 007133 170 NPKAPLYPRL-AQGKSWDEMTVTWTSGYDISEAAPFVEWGLKGD-LQMHSPAGTL-----------TFFQNDMCGSPART 236 (617)
Q Consensus 170 ~~~~P~~~~L-a~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~-~~~~~~~~~~-----------t~~~~~mc~~pa~~ 236 (617)
.|.+|..+.+ ++..+.+++.|.|.-+.. ......|..--+ ....+..... .|..++ .
T Consensus 34 ~~~~p~~~~~~t~~~~~~si~l~~~~p~~---~~~~~~y~vy~ng~~v~~~~~~~~~~~~~~~~~~~~~~~~-------~ 103 (608)
T 2uvf_A 34 SLDAPQQLQVPTLAYDESSIVLVWKAPED---TRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYVND-------K 103 (608)
T ss_dssp --CCCEEEECCTTCBCSSCEEEEEECCSC---CTTEEEEEEEETTEEEEEHHHHHHHHCSSHHHHHHHHHTC-------G
T ss_pred CCCCCCceEeeecccCCcEEEEEEeCCcc---ccccccEEEEECCEEeEeeccccccccccccccccccccc-------c
Confidence 4556766654 123457899999988754 334555554211 1111110000 011111 1
Q ss_pred ccccCCCeEEEEEecCCCCCcEEEEEEeeecCCCCc-cceeeEEEEcCCC
Q 007133 237 VGWRDPGFIHTSFLKNLWPNTVYTYRIGHLLHNGSY-VWSKIYSFRASPY 285 (617)
Q Consensus 237 ~g~~~~g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~-~~S~~~~F~T~p~ 285 (617)
.++...-..|+..+++|+|+|+|.|+|.....+|.. .-++.-..+|.+.
T Consensus 104 ~~~~~~~~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 104 DNFQHKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp GGCSCCCCCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred ccccceeeeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 122111245778899999999999999875434431 1245555666553
No 214
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=62.00 E-value=18 Score=33.97 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=39.9
Q ss_pred CCcEEEecCcccceeeccccCceeccCCcccccCCCCceEEEEECCCCCCCCCCCCCCCCcceeeeCcceEEEEEEecCC
Q 007133 496 KVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYTGTVNGTIHVVVGGGGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHS 575 (617)
Q Consensus 496 ~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~v~iv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~~~~ 575 (617)
+.|++++||+|...... .+++.+|-.|+.|.+.. ....+|..++. .
T Consensus 143 ~~d~vi~GHtH~~~~~~------------------~~~~~~iNpGs~~~pr~-------------~~~~sy~il~~---~ 188 (208)
T 1su1_A 143 QNDVLVYGHTHLPVAEQ------------------RGEIFHFNPGSVSIPKG-------------GNPASYGMLDN---D 188 (208)
T ss_dssp TTCEEECCSSCCCEEEE------------------ETTEEEEECCCSSCCCT-------------TCCCEEEEEET---T
T ss_pred CCCEEEECCcccCccEE------------------eCCEEEEECCCCcCCCC-------------CCCCEEEEEEC---C
Confidence 45999999999854321 13566777777664311 01246777763 3
Q ss_pred eEEEEEEECCCCcEEEEEEE
Q 007133 576 SLLFEYKKSCDGKVYDSFTI 595 (617)
Q Consensus 576 ~L~~~~~~~~dG~v~D~f~i 595 (617)
.++++ .-+|+++.+..|
T Consensus 189 --~~~~~-~~~~~~~~~~~~ 205 (208)
T 1su1_A 189 --VLSVI-ALNDQSIIAQVA 205 (208)
T ss_dssp --EEEEE-ETTTCCEEEEEE
T ss_pred --eEEEE-EeCCCEEEEEec
Confidence 45665 457889988887
No 215
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=60.88 E-value=13 Score=36.46 Aligned_cols=22 Identities=0% Similarity=-0.313 Sum_probs=18.9
Q ss_pred EEEEecCC-CCCcEEEEEEeeec
Q 007133 246 HTSFLKNL-WPNTVYTYRIGHLL 267 (617)
Q Consensus 246 h~v~l~gL-~Pgt~Y~Yrv~~~~ 267 (617)
..+.+++| +|++.|.+||....
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A~N 180 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEAEN 180 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eEEEECCcCcccccEEEEEEEEc
Confidence 56789999 99999999998763
No 216
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=60.26 E-value=62 Score=29.53 Aligned_cols=38 Identities=16% Similarity=-0.116 Sum_probs=25.7
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
....+.+.+|.|++.|.++|......|. ..|....|.+
T Consensus 66 ~~~~~~~~~L~~~~~Y~~~V~A~N~~G~-~~s~~~~~~~ 103 (215)
T 1cd9_B 66 NNCSIPRKNLLLYQYMAIWVQAENMLGS-SESPKLCLDP 103 (215)
T ss_dssp CEEEEEGGGCCTTSCEEEEEEEEETTEE-EECCCEEECG
T ss_pred cEEEECCcccccceEEEEEEEEECCCCC-ccCccEEEch
Confidence 3456788999999999999986532232 2244556654
No 217
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=53.35 E-value=16 Score=39.06 Aligned_cols=78 Identities=12% Similarity=0.131 Sum_probs=49.7
Q ss_pred CceEEEEEeecCCCcCCCCcccccCCCCchhHHHHHHHhc---CCCcEEEEcCccccCCC------c----------HhH
Q 007133 290 SLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIRDL---SNIDIVFHIGDITYANG------Y----------ISQ 350 (617)
Q Consensus 290 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~pDfvl~~GDi~Y~~g------~----------~~~ 350 (617)
.++++++.+.......+ -. ..-+..+++.. .+||.+|++|.+++... . ...
T Consensus 146 ~~l~ivvAsGPyT~sdn--l~--------yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t 215 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDN--FS--------LELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKT 215 (460)
T ss_dssp SCEEEEEEESCCSCSSC--CC--------CHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSS
T ss_pred CCcEEEEEeCCccCCCc--cC--------hHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccC
Confidence 46899999988765431 11 23456666642 26999999999987642 1 122
Q ss_pred HHHHHH-hhhhh----hcCCCeEEcccCCCCC
Q 007133 351 WDQFTA-QVEPI----ASTVPYMIGSGNHERD 377 (617)
Q Consensus 351 wd~f~~-~i~~l----~~~vP~~~v~GNHD~~ 377 (617)
++++|+ .+.++ ...+-++.+||+||..
T Consensus 216 ~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 216 LDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 344433 33333 3456699999999974
No 218
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=52.07 E-value=76 Score=28.89 Aligned_cols=92 Identities=15% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCCccceEeecCCCCcEEEEEEeCCCCC-CCCCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeEEEEEe
Q 007133 172 KAPLYPRLAQGKSWDEMTVTWTSGYDIS-EAAPFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFIHTSFL 250 (617)
Q Consensus 172 ~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~v~l 250 (617)
.+|.-+.. ...+.+.|+++|.-+.+.. +..-.|.|...+...+. -|.. ... .........+
T Consensus 5 ~~P~nl~c-~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~------------~c~~-~~~----~~~~~c~~~~ 66 (210)
T 3n06_B 5 GKPEIFKC-RSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMH------------ECPD-YIT----GGPNSCHFGK 66 (210)
T ss_dssp CCCEEEEE-EBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCE------------ECSC-SST----TCTTEEEECG
T ss_pred CCCeEeEE-EeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCccc------------cCCC-CCC----CCCeEEEeCC
Confidence 34444433 3456899999999875421 12234555543221111 1210 000 0113455566
Q ss_pred cCCCCCcEEEEEEeeecCCCCccceeeEEEEc
Q 007133 251 KNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRA 282 (617)
Q Consensus 251 ~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T 282 (617)
.+|.|.+.|.++|......|.. .|....|.+
T Consensus 67 ~~l~~~~~Y~~~V~A~N~~G~~-~s~~~~~~~ 97 (210)
T 3n06_B 67 QYTSMWRTYIMMVNATNQMGSS-FSDELYVDV 97 (210)
T ss_dssp GGCCSSSCEEEEEEEEETTEEE-ECCCEEECG
T ss_pred CCcccceeEEEEEEEEcCCCCe-eCCcEEEch
Confidence 7899999999999865323322 244556654
No 219
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=49.76 E-value=32 Score=34.34 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=44.5
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCCC-C-----CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCC
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISE-A-----APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDP 242 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~-~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 242 (617)
.-|.+|....+......+.+.|+|..+..... . .-.|+|...+...+... ... .
T Consensus 211 VkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~----~~~----------------~ 270 (306)
T 3d85_D 211 IKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VFT----------------D 270 (306)
T ss_dssp BCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EEE----------------S
T ss_pred EecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEE----eec----------------c
Confidence 46888888888653345899999998743211 1 23577765543222110 000 0
Q ss_pred CeEEEEEecCCCCCcEEEEEEeeecCCCCccceee
Q 007133 243 GFIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKI 277 (617)
Q Consensus 243 g~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~ 277 (617)
... ..| .+++.|..||......|...||+.
T Consensus 271 ~ts--~~l---~~~~~Y~vqVRa~~~~~~G~WSeW 300 (306)
T 3d85_D 271 KTS--ATV---ICRKNASISVRAQDRYYSSSWSEW 300 (306)
T ss_dssp SSE--EEE---CCCSSCEEEEEEEESSSCCCCCCC
T ss_pred ccE--EEE---eCCCeEEEEEEeccCCCCCCCCCC
Confidence 011 122 469999999998754455567764
No 220
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=47.33 E-value=8.1 Score=36.66 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=13.2
Q ss_pred HcCCcEEEecCcccce
Q 007133 494 KYKVDIAFFGHVHNYE 509 (617)
Q Consensus 494 k~~VdlvlsGH~H~Ye 509 (617)
..+++++++||+|...
T Consensus 176 ~~~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 176 IKGADTFIFGHTPAVK 191 (221)
T ss_dssp CBTSSEEEECSSCCSS
T ss_pred ccCCCEEEECCCCCcc
Confidence 3578999999999853
No 221
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=39.35 E-value=74 Score=35.92 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=27.6
Q ss_pred eEEEEEecCCCCCcEEEEEEeeecCCCCcccee---eEEEEcCCC
Q 007133 244 FIHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSK---IYSFRASPY 285 (617)
Q Consensus 244 ~~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~---~~~F~T~p~ 285 (617)
-.+.|..++|.||+ |.++|.....+ ..|++ ...|+-.|+
T Consensus 742 ~~~~~~ytnL~pG~-Y~f~V~a~n~~--g~w~~~~~~l~i~I~Pp 783 (795)
T 4a2l_A 742 DSRTVSYSNLPQGT-YQFLVKAANSD--GKWNPIPTALEIIVLPI 783 (795)
T ss_dssp SCCEEEEECCCSEE-EEEEEEEECTT--SCBCSSCEEEEEEECCC
T ss_pred CcCeEEecccCCCe-EEEEEEEECCC--CccCCCceEEEEEEECC
Confidence 34678999999996 99999876433 46753 466666654
No 222
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=37.01 E-value=3.1e+02 Score=27.80 Aligned_cols=28 Identities=7% Similarity=0.145 Sum_probs=20.1
Q ss_pred CCCCCccceEeecCCCCcEEEEEEeCCC
Q 007133 170 NPKAPLYPRLAQGKSWDEMTVTWTSGYD 197 (617)
Q Consensus 170 ~~~~P~~~~La~~~~~~~m~V~W~T~~~ 197 (617)
-|.+|..+.+.-....++|.|+|.-+.+
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~ 58 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLS 58 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCC
Confidence 3677887777433336899999988754
No 223
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=32.30 E-value=3.5e+02 Score=26.02 Aligned_cols=38 Identities=11% Similarity=-0.115 Sum_probs=23.5
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCccceeeEEEEcC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSKIYSFRAS 283 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~~~~F~T~ 283 (617)
...+..++|.|.+.|.++|.....-|. ..|....|.+.
T Consensus 161 ~~~~~~~~L~~~~~Y~f~V~A~N~~G~-~~s~~~~~~~~ 198 (313)
T 2d9q_B 161 HCSIPRKHLLLYQNMGIWVQAENALGT-SMSPQLCLDPM 198 (313)
T ss_dssp EEEEEGGGCCSSSCEEEEEEEEETTEE-EECCCEEECGG
T ss_pred EEEECccccccceeEEEEEEEECCCCC-ccCccEEEehh
Confidence 344555779999999999986532232 12334456543
No 224
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=31.10 E-value=99 Score=31.02 Aligned_cols=73 Identities=8% Similarity=0.002 Sum_probs=41.1
Q ss_pred cCCCCCccceEeecCCCCcEEEEEEeCCCCCCC---CCEEEEeccCCCcceecccceEEeecccCCCCCccccccCCCeE
Q 007133 169 ANPKAPLYPRLAQGKSWDEMTVTWTSGYDISEA---APFVEWGLKGDLQMHSPAGTLTFFQNDMCGSPARTVGWRDPGFI 245 (617)
Q Consensus 169 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 245 (617)
.-|.+|....+... .+.+.|+|..+...-.. .-.|+|...++..... .... ...
T Consensus 219 Vkp~PP~nL~v~~~--~~~l~v~W~~P~~~~~~~~L~Yevryr~~~~~~~~~----~~~~-----------------~~~ 275 (317)
T 3qt2_A 219 DQINPPLNVTAEIE--GTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI----EKLM-----------------TNA 275 (317)
T ss_dssp BCCCCCEEEEEEEE--TTEEEEEEECCSSSSCGGGEEEEEEEEETTTCCEEE----EEES-----------------SSE
T ss_pred CcCCCCceeEEEEe--CCcEEEEECCCCcccccCceEEEEEEEeCCCCcceE----EEEe-----------------eeE
Confidence 36778877777654 37999999986421110 2345555432211100 0000 011
Q ss_pred EEEEecCCCCCcEEEEEEeeec
Q 007133 246 HTSFLKNLWPNTVYTYRIGHLL 267 (617)
Q Consensus 246 h~v~l~gL~Pgt~Y~Yrv~~~~ 267 (617)
+ .+ .|.|+++|..||....
T Consensus 276 ~--~l-~l~p~~~Y~vqVR~k~ 294 (317)
T 3qt2_A 276 F--IS-IIDDLSKYDVQVRAAV 294 (317)
T ss_dssp E--EE-ECCTTCCEEEEEEEEE
T ss_pred E--Ee-ecCCCCEEEEEEEEee
Confidence 1 34 4999999999999874
No 225
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=28.44 E-value=99 Score=31.41 Aligned_cols=21 Identities=14% Similarity=0.079 Sum_probs=16.7
Q ss_pred ecCCCCCcEEEEEEeeecCCC
Q 007133 250 LKNLWPNTVYTYRIGHLLHNG 270 (617)
Q Consensus 250 l~gL~Pgt~Y~Yrv~~~~~dg 270 (617)
=++|.+|++|+|.|.....++
T Consensus 75 Dt~~~~GttYyYwVk~~~~ng 95 (344)
T 3b4n_A 75 DADTNSGLNYWYWVDVVSENQ 95 (344)
T ss_dssp ECCCCTTCCCEEEEEEEETTC
T ss_pred ecCcCCCcEEEEEEEEecCCC
Confidence 378999999999998764344
No 226
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=22.05 E-value=2e+02 Score=32.11 Aligned_cols=37 Identities=27% Similarity=0.217 Sum_probs=25.3
Q ss_pred EEEEEecCCCCCcEEEEEEeeecCCCCcccee---eEEEEcCC
Q 007133 245 IHTSFLKNLWPNTVYTYRIGHLLHNGSYVWSK---IYSFRASP 284 (617)
Q Consensus 245 ~h~v~l~gL~Pgt~Y~Yrv~~~~~dg~~~~S~---~~~F~T~p 284 (617)
.++|..++|.||+ |.++|..... ...|++ ...++-.|
T Consensus 709 ~~~~~ytnL~pG~-Y~f~V~a~~~--~g~w~~~~~~l~I~I~P 748 (758)
T 3ott_A 709 INRITYSNLSYGN-YQLIISKLER--DGQPSNRPHILNIRILP 748 (758)
T ss_dssp CCEEEECSCCSEE-EEEEEEEBCT--TSCBCSSCEEEEEEECC
T ss_pred cceEEecCCCCcc-EEEEEEEeCC--CCCccCccEEEEEEECC
Confidence 4678999999986 9999987633 346764 34444444
Done!