BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007134
(616 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/582 (65%), Positives = 477/582 (81%), Gaps = 6/582 (1%)
Query: 41 VVRKCITLLQVCA-SSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP--MSYAH 97
+V KCI LLQ SS KL+Q+HAFSIRHGV +++ +LGK+LI+ +VSL P MSYAH
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 98 NIFSHVQDP-NIFTWNTMIRGYAESANPLLAVELYSKMHVSG-IKPDTHTYPFLLKAISK 155
+FS ++ P N+F WNT+IRGYAE N + A LY +M VSG ++PDTHTYPFL+KA++
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
+ADVR+GE HSV IR+GF SL++VQNSL+H+YA G V A KVF+ M E+DLVAWNSV
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
INGFA NGKP EAL L+ EM S+G++PDG+T+VSL SACA++GAL LG+R H Y+ KVGL
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
+ N++ +N LLD Y++CG + A+ +F EM +N+VSW++L+VGLAVNGFGKEA+ELFK
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313
Query: 336 ME-IGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRA 394
ME G +P E+TFVG+LYACSHCGMV EGF YF+RM++EY I P+IEHFGCMVDLL RA
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 395 GLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLS 454
G VK+AYEYI++M M PN VIWRTLLGACT+HG S +AE AR +LQLEP HSGDYVLLS
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
Query: 455 NLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLA 514
N+YA EQRW +VQ++R+ M+++ VKK PGHSLVE+GNRV EF MGD+SHPQ++ I+A L
Sbjct: 434 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 493
Query: 515 EITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLR 574
E+T +L+ EGYVP+ NV+ D+EEEEKE+A+ YHSEKIAIAFML++T +P+ VVKNLR
Sbjct: 494 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 553
Query: 575 VCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
VCADCHLAIKL+SKVY+REIVVRDRSRFHHFK+G CSC+DYW
Sbjct: 554 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/608 (42%), Positives = 380/608 (62%), Gaps = 38/608 (6%)
Query: 46 ITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP-----MSYAHNIF 100
+ LLQ C SS LK +H F +R + + + L + +F + YA+ IF
Sbjct: 16 LALLQSC-SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 101 SHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVR 160
S +Q+PN+F +N +IR ++ A P A Y++M S I PD T+PFL+KA S++ V
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 161 MGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV----- 215
+GEQTHS +R GF++ V+V+NSLVHMYA G + A ++F M RD+V+W S+
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 216 --------------------------INGFASNGKPNEALTLFREMASEGVEPDGYTMVS 249
ING+A N +A+ LF M EGV + MVS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 250 LFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRN 309
+ S+CA LGAL G RA+ YV K ++ N+ + AL+D + +CG I A VF + + +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 310 AVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFK 369
++SWS+++ GLAV+G +A+ F +M GF+P +VTF VL ACSH G+V++G ++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 370 RMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS 429
MK ++GI P++EH+GC+VD+LGRAG + +A +I M + PNA I LLGAC I+ ++
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 430 AIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVEL 489
+AE + L++++P+HSG YVLLSN+YA +W ++ +R M ++ VKK PG SL+E+
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 490 GNRVFEFFMG-DRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYH 548
++ +F MG D+ HP+ +I EI K++L GY T + F D++EEEKE ++ H
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMH 554
Query: 549 SEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDG 608
SEK+AIA+ ++ T PGT +R+VKNLRVC DCH KLIS+VY RE++VRDR+RFHHF++G
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614
Query: 609 HCSCRDYW 616
CSCRDYW
Sbjct: 615 VCSCRDYW 622
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/586 (42%), Positives = 359/586 (61%), Gaps = 6/586 (1%)
Query: 33 SQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP 92
+++ P+T + LL+ +S +LK++HA +R G N L + L +V
Sbjct: 3 AKQTPLTKQMLS--ELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGD-- 58
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
M YA +F + P IF WNT+ +GY + P ++ LY KM G++PD TYPF++KA
Sbjct: 59 MCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKA 118
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
IS+L D G H+ ++ GF L V LV MY FG + A +FE M +DLVAW
Sbjct: 119 ISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAW 178
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK 272
N+ + G AL F +M ++ V+ D +T+VS+ SAC +LG+L +G + K
Sbjct: 179 NAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
+ N+ V NA LD + KCG AA+ +F EM++RN VSWST++VG A+NG +EAL L
Sbjct: 239 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 298
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRM--KDEYGIMPKIEHFGCMVDL 390
F M+ G P VTF+GVL ACSH G+V+EG YF M ++ + P+ EH+ CMVDL
Sbjct: 299 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDL 358
Query: 391 LGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDY 450
LGR+GL+++AYE+I+ M + P+ IW LLGAC +H + + L++ P +
Sbjct: 359 LGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYH 418
Query: 451 VLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIH 510
VLLSN+YA +W V +VR M K KK +S VE ++ F GD+SHPQ++ I+
Sbjct: 419 VLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIY 478
Query: 511 AMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVV 570
L EI KK++ GYVP T +VF D+E EEKE +LS+HSEK+AIAF L+ PG P+RV+
Sbjct: 479 EKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVM 538
Query: 571 KNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
KNLR C DCH K +S + S EI++RD++RFHHF++G CSC+++W
Sbjct: 539 KNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/608 (40%), Positives = 367/608 (60%), Gaps = 50/608 (8%)
Query: 59 LKQVHAFSIRHGVPLNNPDLGKYLIYAIVSL--SFPMSYAHNIFSHVQDPNIFTWNTMIR 116
L Q+HA I+ G + + L + S + YAH IF+ + N F+WNT+IR
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 117 GYAESA--NPLLAVEL-YSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNG 173
G++ES L+A+ L Y M ++P+ T+P +LKA +K ++ G+Q H +A++ G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 174 FESLVFVQNSLVHMYAAFGHVKDA------------------------------------ 197
F FV ++LV MY G +KDA
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 198 -----CK----VFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMV 248
CK +F+ M +R +V+WN++I+G++ NG +A+ +FREM + P+ T+V
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 249 SLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKR 308
S+ A + LG+L LG H Y G+ + + +AL+D YSKCGII A VF + +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 309 NAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYF 368
N ++WS ++ G A++G +A++ F +M G P +V ++ +L ACSH G+V+EG YF
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 369 KRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGH 428
+M G+ P+IEH+GCMVDLLGR+GL+ +A E+I NM + P+ VIW+ LLGAC + G+
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 429 SAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVE 488
+ + + L+ + P SG YV LSN+YA + W V E+R M ++ ++K PG SL++
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 489 LGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYH 548
+ + EF + D SHP+ +EI++ML EI+ KL+L GY P T V ++EEE+KE+ L YH
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYH 578
Query: 549 SEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDG 608
SEKIA AF L++T+PG P+R+VKNLR+C DCH +IKLISKVY R+I VRDR RFHHF+DG
Sbjct: 579 SEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 638
Query: 609 HCSCRDYW 616
CSC DYW
Sbjct: 639 SCSCMDYW 646
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/593 (41%), Positives = 359/593 (60%), Gaps = 35/593 (5%)
Query: 58 KLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRG 117
+++Q+HA G ++ +G ++ +S + YA+ I + P +F N+MIR
Sbjct: 21 EVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRA 80
Query: 118 YAESANPLLAVELYSKMHVSG--IKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFE 175
+ +S P + + Y ++ SG +KPD +T FL++A + L G Q H + IR GF+
Sbjct: 81 HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFD 140
Query: 176 SLVFVQNSLVHMYAAFGHVKDAC--------------------------------KVFEL 203
+ VQ L+ +YA G + D+C K+FE
Sbjct: 141 NDPHVQTGLISLYAELGCL-DSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 204 MSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALG 263
M ERD +AWN++I+G+A G+ EAL +F M EGV+ +G M+S+ SAC +LGAL G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 264 RRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVN 323
R AH+Y+ + + V + L+D Y+KCG + A VF M ++N +WS+ + GLA+N
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 324 GFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEH 383
GFG++ LELF M+ G P VTFV VL CS G VDEG +F M++E+GI P++EH
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 384 FGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLE 443
+GC+VDL RAG ++ A IQ M M P+A +W +LL A ++ + + +A +L+LE
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 444 PKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSH 503
+ G YVLLSN+YA W NV VR++M + V+K PG S++E+ V EFF+GD+SH
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 504 PQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAP 563
P+ +I A+ +I+++L+L GY T V DI+EEEKEDAL HSEK AIAF +++
Sbjct: 500 PKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKE 559
Query: 564 GTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
P+R+VKNLRVC DCH +ISK+++REI+VRDR+RFHHFKDGHCSC +W
Sbjct: 560 DVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/644 (39%), Positives = 380/644 (59%), Gaps = 66/644 (10%)
Query: 38 ITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAH 97
+T + C++LL C + + L Q+H I++GV ++ GK +++ +S+S + YA
Sbjct: 1 MTIAIHHCLSLLNSCKNLR-ALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR 59
Query: 98 NIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSG-IKPDTHTYPFLLKAISKL 156
+ +P+ F +NT++RGY+ES P +V ++ +M G + PD+ ++ F++KA+
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 157 ADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVI 216
+R G Q H A+++G ES +FV +L+ MY G V+ A KVF+ M + +LVAWN+VI
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 217 N-------------------------------GFASNGKPNEALTLFREM---------- 235
G+ G+ A +F EM
Sbjct: 180 TACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWST 239
Query: 236 ---------------------ASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVG 274
G+ P+ ++ + SAC++ G+ G+ H +V K G
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 299
Query: 275 LSDNVNVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAVNGFGKEALELF 333
S V+VNNAL+D YS+CG + A+ VF M+ KR VSW++++ GLA++G G+EA+ LF
Sbjct: 300 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 334 KEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGR 393
EM G P ++F+ +L+ACSH G+++EG YF MK Y I P+IEH+GCMVDL GR
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 419
Query: 394 AGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLL 453
+G +++AY++I M +PP A++WRTLLGAC+ HG+ +AE + L +L+P +SGD VLL
Sbjct: 420 SGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLL 479
Query: 454 SNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAML 513
SN YA +W +V +R++M+ +R+KKT SLVE+G +++F G++ E H L
Sbjct: 480 SNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKL 539
Query: 514 AEITKKLKLE-GYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKN 572
EI +LK E GY P + D+EEEEKED +S HSEK+A+AF L + G +R+VKN
Sbjct: 540 KEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKN 599
Query: 573 LRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
LR+C DCH +KL SKVY EI+VRDR+RFH FKDG CSCRDYW
Sbjct: 600 LRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/591 (40%), Positives = 367/591 (62%), Gaps = 3/591 (0%)
Query: 28 HSTPASQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIV 87
H+ ++ + I +V + LL +S +L Q+ A++I+ + + + K + +
Sbjct: 14 HAETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTE 72
Query: 88 S-LSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTY 146
S MSYA ++F + +P+I +N+M RGY+ NPL L+ ++ GI PD +T+
Sbjct: 73 SPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTF 132
Query: 147 PFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSE 206
P LLKA + + G Q H ++++ G + V+V +L++MY V A VF+ + E
Sbjct: 133 PSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE 192
Query: 207 RDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRA 266
+V +N++I G+A +PNEAL+LFREM + ++P+ T++S+ S+CA LG+L LG+
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 267 HTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFG 326
H Y K V VN AL+D ++KCG + A +F +MR ++ +WS ++V A +G
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 327 KEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGC 386
++++ +F+ M P E+TF+G+L ACSH G V+EG YF +M ++GI+P I+H+G
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 387 MVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKH 446
MVDLL RAG ++ AYE+I + + P ++WR LL AC+ H + +AE + +L+ H
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSH 432
Query: 447 SGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQT 506
GDYV+LSNLYA ++W V +R+ M + K PG S +E+ N V EFF GD T
Sbjct: 433 GGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSAT 492
Query: 507 EEIHAMLAEITKKLKLEGYVPRTENVF-ADIEEEEKEDALSYHSEKIAIAFMLVNTAPGT 565
++H L E+ K+LKL GYVP T V A++ ++EKE L YHSEK+AI F L+NT PGT
Sbjct: 493 TKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGT 552
Query: 566 PVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
+RVVKNLRVC DCH A KLIS ++ R++V+RD RFHHF+DG CSC D+W
Sbjct: 553 TIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/576 (42%), Positives = 353/576 (61%), Gaps = 9/576 (1%)
Query: 49 LQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP--MSYAHNIFSHVQDP 106
L V ++ K L+Q+HA +R + N+ +L +SL P ++Y+ +FS +P
Sbjct: 17 LIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSL-IPRDINYSCRVFSQRLNP 75
Query: 107 NIFTWNTMIRGYAESANPLLAVELYSKMHV-SGIKPDTHTYPFLLKAISKLADVRMGEQT 165
+ NTMIR ++ S P L+ + S + + + F LK K D+ G Q
Sbjct: 76 TLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQI 135
Query: 166 HSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKP 225
H +GF S + +L+ +Y+ + DACKVF+ + +RD V+WN + + + N +
Sbjct: 136 HGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRT 195
Query: 226 NEALTLFREMASE---GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVN 282
+ L LF +M ++ V+PDG T + ACA LGAL G++ H ++ + GLS +N++
Sbjct: 196 RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLS 255
Query: 283 NALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV 342
N L+ YS+CG + A +VF MR+RN VSW+ L+ GLA+NGFGKEA+E F EM G
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 343 PGEVTFVGVLYACSHCGMVDEGFSYFKRMKD-EYGIMPKIEHFGCMVDLLGRAGLVKQAY 401
P E T G+L ACSH G+V EG +F RM+ E+ I P + H+GC+VDLLGRA L+ +AY
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY 375
Query: 402 EYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQ 461
I++M M P++ IWRTLLGAC +HG + E S L++L+ + +GDYVLL N Y+
Sbjct: 376 SLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Query: 462 RWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLK 521
+W V E+R M ++R+ PG S +EL V EF + D SHP+ EEI+ MLAEI ++LK
Sbjct: 436 KWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Query: 522 LEGYVPRTENVFADIE-EEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCH 580
+ GYV + ++E EEEK AL YHSEK+AIAF ++ T PGT +RV KNLR C DCH
Sbjct: 496 IAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCH 555
Query: 581 LAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
K +S VY R ++VRDRSRFHHFK G CSC D+W
Sbjct: 556 NFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/604 (40%), Positives = 360/604 (59%), Gaps = 34/604 (5%)
Query: 46 ITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP-MSYAHNIFSHVQ 104
++ LQ C S + +LKQ+HA ++ G+ ++ + K+L + I S S + YA +F
Sbjct: 18 MSCLQRC-SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 105 DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQ 164
P+ F WN MIRG++ S P ++ LY +M S + +T+P LLKA S L+ Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 165 THSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGK 224
H+ + G+E+ V+ NSL++ YA G+ K A +F+ + E D V+WNSVI G+ GK
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 225 PNEALTLFREMASEG-------------------------------VEPDGYTMVSLFSA 253
+ ALTLFR+MA + VEPD ++ + SA
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 254 CAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSW 313
CA+LGAL G+ H+Y+ K + + + L+D Y+KCG + A VF+ ++K++ +W
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316
Query: 314 STLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKD 373
+ L+ G A +G G+EA+ F EM+ G P +TF VL ACS+ G+V+EG F M+
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 376
Query: 374 EYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAE 433
+Y + P IEH+GC+VDLLGRAGL+ +A +IQ M + PNAVIW LL AC IH + + E
Sbjct: 377 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 436
Query: 434 IARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRV 493
L+ ++P H G YV +N++A +++W E RR M ++ V K PG S + L
Sbjct: 437 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 496
Query: 494 FEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFAD-IEEEEKEDALSYHSEKI 552
EF GDRSHP+ E+I + + +KL+ GYVP E + D ++++E+E + HSEK+
Sbjct: 497 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 556
Query: 553 AIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSC 612
AI + L+ T PGT +R++KNLRVC DCH KLISK+Y R+IV+RDR+RFHHF+DG CSC
Sbjct: 557 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616
Query: 613 RDYW 616
DYW
Sbjct: 617 GDYW 620
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/609 (42%), Positives = 371/609 (60%), Gaps = 22/609 (3%)
Query: 28 HSTPASQENPITSVV--RKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYA 85
H PAS + T+ ++ +L + C S +LKQ+HAF++R P L Y
Sbjct: 32 HIPPASSPSASTAGNHHQRIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGKIL 90
Query: 86 IVSLSFP-MSYAHNIFSHVQDPNIFTWNTMIRGYA-ESANPLLAVELYSKMHVSG-IKPD 142
+S SF ++YA +F +++ + F WNT+IR A + + A LY KM G PD
Sbjct: 91 QLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPD 150
Query: 143 THTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFE 202
HT+PF+LKA + + G+Q H +++GF V+V N L+H+Y + G + A KVF+
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 203 LMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALAL 262
M ER LV+WNS+I+ G+ + AL LFREM EPDGYTM S+ SACA LG+L+L
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSL 269
Query: 263 GRRAHTYVWK---VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVG 319
G AH ++ + V ++ +V V N+L++ Y KCG + A++VF+ M+KR+ SW+ +++G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 320 LAVNGFGKEALELFKEM--EIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGI 377
A +G +EA+ F M + P VTFVG+L AC+H G V++G YF M +Y I
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 378 MPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSA--IAEIA 435
P +EH+GC+VDL+ RAG + +A + + +M M P+AVIWR+LL AC G S EIA
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 436 RSTLLQLEPKHS------GDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVEL 489
R+ + E S G YVLLS +YA RW +V VR+ M + ++K PG S +E+
Sbjct: 450 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Query: 490 GNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVP-RTENVFADIEEE-EKEDALSY 547
EFF GD SHPQT++I+ L I +L+ GY+P R++ D + KE +L
Sbjct: 510 NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRL 569
Query: 548 HSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKD 607
HSE++AIAF L+N P TP+R+ KNLRVC DCH KLISKV++ EI+VRDR RFHHFKD
Sbjct: 570 HSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKD 629
Query: 608 GHCSCRDYW 616
G CSC DYW
Sbjct: 630 GSCSCLDYW 638
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/528 (40%), Positives = 333/528 (63%)
Query: 89 LSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPF 148
+ F + +F + ++ ++NT+I GYA+S A+ + +M + +KPD+ T
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 149 LLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERD 208
+L S+ DV G++ H IR G +S V++ +SLV MYA ++D+ +VF + RD
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 209 LVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHT 268
++WNS++ G+ NG+ NEAL LFR+M + V+P S+ ACA L L LG++ H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 269 YVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKE 328
YV + G N+ + +AL+D YSKCG I AA+++F M + VSW+ +++G A++G G E
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 329 ALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMV 388
A+ LF+EM+ G P +V FV VL ACSH G+VDE + YF M YG+ ++EH+ +
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 389 DLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSG 448
DLLGRAG +++AY +I M + P +W TLL +C++H + +AE + ++ ++ G
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 547
Query: 449 DYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEE 508
YVL+ N+YA RW + ++R M K+ ++K P S +E+ N+ F GDRSHP ++
Sbjct: 548 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 607
Query: 509 IHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVR 568
I+ L + ++++ EGYV T V D++EE K + L HSE++A+AF ++NT PGT +R
Sbjct: 608 INEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIR 667
Query: 569 VVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
V KN+R+C DCH+AIK ISK+ REI+VRD SRFHHF G+CSC DYW
Sbjct: 668 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 47/413 (11%)
Query: 55 SKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTM 114
SK + KQ+HA IR + ++ +I + + A +F ++ P + W ++
Sbjct: 20 SKSQAKQLHAQFIR---TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 115 IRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGF 174
IR + + + A+ + +M SG PD + +P +LK+ + + D+R GE H +R G
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 175 ESLVFVQNSLVHMYA---------AFGHVKD-----------------AC---------- 198
+ ++ N+L++MYA + G+V D C
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 199 KVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELG 258
+VFE+M +D+V++N++I G+A +G +AL + REM + ++PD +T+ S+ +E
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 259 ALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVV 318
+ G+ H YV + G+ +V + ++L+D Y+K I ++RVF + R+ +SW++LV
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 319 GLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEG---FSYFKRMKDEY 375
G NG EAL LF++M PG V F V+ AC+H + G Y R
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG---- 372
Query: 376 GIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGH 428
G I +VD+ + G +K A + M + + V W ++ +HGH
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGH 424
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 135/319 (42%), Gaps = 47/319 (14%)
Query: 149 LLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLV-HMYAAFGHVKDACKVFELMSER 207
L+K +++ +Q H+ IR +SL S+V +Y + +A +F+ +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 208 DLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAH 267
++AW SVI F ++AL F EM + G PD S+ +C + L G H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 268 TYVWKVGLSDNVNVNNALLDFYSK---------------------------------CGI 294
++ ++G+ ++ NAL++ Y+K C +
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 295 ---IIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGV 351
I + +RVF M +++ VS++T++ G A +G ++AL + +EM P T V
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 352 LYACSHCGMVDEG---FSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNML 408
L S V +G Y R GI + +VD+ ++ ++ + E + + L
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRK----GIDSDVYIGSSLVDMYAKSARIEDS-ERVFSRL 303
Query: 409 MPPNAVIWRTLLGACTIHG 427
+ + W +L+ +G
Sbjct: 304 YCRDGISWNSLVAGYVQNG 322
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/521 (42%), Positives = 330/521 (63%), Gaps = 5/521 (0%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
AH +F + N+ +W TMI Y++ A+EL M ++P+ +TY +L++ +
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
++DVRM H I+ G ES VFV+++L+ ++A G +DA VF+ M D + WNS+
Sbjct: 175 MSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
I GFA N + + AL LF+ M G + T+ S+ AC L L LG +AH ++ V
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKY 289
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
++ +NNAL+D Y KCG + A RVF +M++R+ ++WST++ GLA NG+ +EAL+LF+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 336 MEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAG 395
M+ G P +T VGVL+ACSH G++++G+ YF+ MK YGI P EH+GCM+DLLG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 396 LVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSN 455
+ A + + M P+AV WRTLLGAC + + +AE A ++ L+P+ +G Y LLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 456 LYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAE 515
+YA Q+W +V+E+R M +KK PG S +E+ ++ F +GD SHPQ E+ L +
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 516 ITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRV 575
+ +L GYVP T V D+E E+ ED+L +HSEK+A+AF L+ +R+ KNLR+
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589
Query: 576 CADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
C DCH+ KL SK+ R IV+RD R+HHF+DG CSC DYW
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 127 AVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVH 186
A++ + G+ D+ TY L+K V G NG ++F+ N L++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 187 MYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYT 246
MY F + DA ++F+ M +R++++W ++I+ ++ +AL L M + V P+ YT
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 247 MVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR 306
S+ +C + + R H + K GL +V V +AL+D ++K G A VF EM
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 307 KRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGF- 365
+A+ W++++ G A N ALELFK M+ GF+ + T VL AC+ +++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 366 SYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTI 425
++ +K + ++ +VD+ + G ++ A + N + + + W T++
Sbjct: 282 AHVHIVKYDQDLILN----NALVDMYCKCGSLEDALR-VFNQMKERDVITWSTMISGLAQ 336
Query: 426 HGHS 429
+G+S
Sbjct: 337 NGYS 340
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/523 (42%), Positives = 335/523 (64%), Gaps = 2/523 (0%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + ++ +WN MI GYAE+ N A+EL+ M + ++PD T ++ A ++
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
+ +G Q H +GF S + + N+L+ +Y+ G ++ AC +FE + +D+++WN++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK--V 273
I G+ EAL LF+EM G P+ TM+S+ ACA LGA+ +GR H Y+ K
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 274 GLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELF 333
G+++ ++ +L+D Y+KCG I AA +VF + ++ SW+ ++ G A++G + +LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 334 KEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGR 393
M G P ++TFVG+L ACSH GM+D G F+ M +Y + PK+EH+GCM+DLLG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 394 AGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLL 453
+GL K+A E I M M P+ VIW +LL AC +HG+ + E L+++EP++ G YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 454 SNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAML 513
SN+YA RW V + R + + +KK PG S +E+ + V EF +GD+ HP+ EI+ ML
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 514 AEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNL 573
E+ L+ G+VP T V ++EEE KE AL +HSEK+AIAF L++T PGT + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 574 RVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
RVC +CH A KLISK+Y REI+ RDR+RFHHF+DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 238/440 (54%), Gaps = 42/440 (9%)
Query: 27 YHSTPASQENPITSVVR-KCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYA 85
+H P+S + P S+ ++LL C + + L+ +HA I+ G+ N L K + +
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQ-SLRIIHAQMIKIGLHNTNYALSKLIEFC 75
Query: 86 IVSLSFP-MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTH 144
I+S F + YA ++F +Q+PN+ WNTM RG+A S++P+ A++LY M G+ P+++
Sbjct: 76 ILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 135
Query: 145 TYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFE-- 202
T+PF+LK+ +K + G+Q H ++ G + ++V SL+ MY G ++DA KVF+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 203 --------------------------LMSE---RDLVAWNSVINGFASNGKPNEALTLFR 233
L E +D+V+WN++I+G+A G EAL LF+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 234 EMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCG 293
+M V PD TMV++ SACA+ G++ LGR+ H ++ G N+ + NAL+D YSKCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 294 IIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLY 353
+ A +F + ++ +SW+TL+ G KEAL LF+EM G P +VT + +L
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 354 ACSHCGMVDEG----FSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLM 409
AC+H G +D G KR+K G+ ++D+ + G ++ A++ + N ++
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLK---GVTNASSLRTSLIDMYAKCGDIEAAHQ-VFNSIL 431
Query: 410 PPNAVIWRTLLGACTIHGHS 429
+ W ++ +HG +
Sbjct: 432 HKSLSSWNAMIFGFAMHGRA 451
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/561 (40%), Positives = 333/561 (59%), Gaps = 37/561 (6%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
++YA N+F + ++ TWNTMI Y A +L+ +M S + PD ++ A
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 153 ISKLADVRMGEQTHSVAIRNG---------------------------FESL----VFVQ 181
+ ++R + I N F + +FV
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 182 NSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE 241
++V Y+ G + DA +F+ ++DLV W ++I+ + + P EAL +F EM G++
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 242 PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRV 301
PD +M S+ SACA LG L + H+ + GL +++NNAL++ Y+KCG + A + V
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 302 FREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMV 361
F +M +RN VSWS+++ L+++G +AL LF M+ P EVTFVGVLY CSH G+V
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 362 DEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLG 421
+EG F M DEY I PK+EH+GCMVDL GRA L+++A E I++M + N VIW +L+
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 422 ACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKT 481
AC IHG + + A +L+LEP H G VL+SN+YA EQRW +V+ +RR M ++ V K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 482 PGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEK 541
G S ++ + EF +GD+ H Q+ EI+A L E+ KLKL GYVP +V D+EEEEK
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 542 EDALSYHSEKIAIAFMLVNTAPGTP------VRVVKNLRVCADCHLAIKLISKVYSREIV 595
+D + +HSEK+A+ F L+N +R+VKNLRVC DCHL KL+SKVY REI+
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 596 VRDRSRFHHFKDGHCSCRDYW 616
VRDR+RFH +K+G CSCRDYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 205/444 (46%), Gaps = 42/444 (9%)
Query: 37 PITSVVRKCI-TLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMS- 94
PI S I L C S H +KQ+HA +R + N L +L VS S
Sbjct: 6 PIASTAANTILEKLSFCKSLNH-IKQLHAHILRTVI---NHKLNSFLFNLSVSSSSINLS 61
Query: 95 YAHNIFSHVQDP-NIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAI 153
YA N+FS + P +N +R + S+ P + Y ++ G + D ++ +LKA+
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 154 SKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWN 213
SK++ + G + H VA + FV+ + MYA+ G + A VF+ MS RD+V WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 214 SVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK- 272
++I + G +EA LF EM V PD + ++ SAC G + R + ++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 273 ------------------VGLSD------------NVNVNNALLDFYSKCGIIIAAQRVF 302
G D N+ V+ A++ YSKCG + AQ +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 303 REMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVD 362
+ K++ V W+T++ + + +EAL +F+EM G P V+ V+ AC++ G++D
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 363 EGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
+ + G+ ++ ++++ + G + + + M N V W +++ A
Sbjct: 362 KA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM-PRRNVVSWSSMINA 419
Query: 423 CTIHGHS--AIAEIARSTLLQLEP 444
++HG + A++ AR +EP
Sbjct: 420 LSMHGEASDALSLFARMKQENVEP 443
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/577 (41%), Positives = 353/577 (61%), Gaps = 4/577 (0%)
Query: 43 RKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSF--PMSYAHNIF 100
++C+ LL+ C + + KQVHA I+ + ++ ++ + M+YA +IF
Sbjct: 31 QECLYLLKRCHNID-EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 101 SHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVR 160
+ DP F +NTMIRGY + A+ Y++M G +PD TYP LLKA ++L +R
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 161 MGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFA 220
G+Q H + G E+ VFVQNSL++MY G ++ + VFE + + +W+S+++ A
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 221 SNGKPNEALTLFREMASE-GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNV 279
G +E L LFR M SE ++ + MVS ACA GAL LG H ++ + N+
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 280 NVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIG 339
V +L+D Y KCG + A +F++M KRN +++S ++ GLA++G G+ AL +F +M
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 340 GFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQ 399
G P V +V VL ACSH G+V EG F M E + P EH+GC+VDLLGRAGL+++
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 400 AYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAY 459
A E IQ++ + N VIWRT L C + + + +IA LL+L + GDY+L+SNLY+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 460 EQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKK 519
Q W +V R + + +K+TPG S+VEL + F DRSHP+ +EI+ ML ++ +
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 520 LKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADC 579
LK EGY P + +++EEEK++ L HS+K+AIAF L+ T PG+ +++ +NLR+C+DC
Sbjct: 510 LKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDC 569
Query: 580 HLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
H K IS +Y REIVVRDR+RFH FK G CSC+DYW
Sbjct: 570 HTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/557 (40%), Positives = 345/557 (61%), Gaps = 33/557 (5%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
+ A +F+ +++ ++ +WN+MI G+ + +P A+EL+ KM +K T +L A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERD---- 208
+K+ ++ G Q S N + + N+++ MY G ++DA ++F+ M E+D
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 209 ---------------------------LVAWNSVINGFASNGKPNEALTLFREMA-SEGV 240
+VAWN++I+ + NGKPNEAL +F E+ + +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 241 EPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQR 300
+ + T+VS SACA++GAL LGR H+Y+ K G+ N +V +AL+ YSKCG + ++
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 301 VFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGM 360
VF + KR+ WS ++ GLA++G G EA+++F +M+ P VTF V ACSH G+
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 361 VDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLL 420
VDE S F +M+ YGI+P+ +H+ C+VD+LGR+G +++A ++I+ M +PP+ +W LL
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 421 GACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKK 480
GAC IH + +AE+A + LL+LEP++ G +VLLSN+YA +W NV E+R+ M +KK
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 481 TPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEE 540
PG S +E+ + EF GD +HP +E+++ L E+ +KLK GY P V IEEEE
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
Query: 541 -KEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDR 599
KE +L+ HSEK+AI + L++T +RV+KNLRVC DCH KLIS++Y REI+VRDR
Sbjct: 662 MKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDR 721
Query: 600 SRFHHFKDGHCSCRDYW 616
RFHHF++G CSC D+W
Sbjct: 722 YRFHHFRNGQCSCNDFW 738
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 234/437 (53%), Gaps = 43/437 (9%)
Query: 28 HSTPASQENPITSVVR-KCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAI 86
H ++ P T+ R + I+L++ C S + +LKQ H IR G + K A
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIERCVSLR-QLKQTHGHMIRTGTFSDPYSASKLFAMAA 73
Query: 87 VSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKM-HVSGIKPDTHT 145
+S + YA +F + PN F WNT+IR YA +P+L++ + M S P+ +T
Sbjct: 74 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 146 YPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMS 205
+PFL+KA ++++ + +G+ H +A+++ S VFV NSL+H Y + G + ACKVF +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 206 ERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRR 265
E+D+V+WNS+INGF G P++AL LF++M SE V+ TMV + SACA++ L GR+
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 266 AHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAV--- 322
+Y+ + ++ N+ + NA+LD Y+KCG I A+R+F M +++ V+W+T++ G A+
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 323 ----------------------------NGFGKEALELFKEMEIGGFVP-GEVTFVGVLY 353
NG EAL +F E+++ + ++T V L
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 354 ACSHCGMVDEG---FSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMP 410
AC+ G ++ G SY K+ +GI ++ + + G ++++ E + N +
Sbjct: 374 ACAQVGALELGRWIHSYIKK----HGIRMNFHVTSALIHMYSKCGDLEKSRE-VFNSVEK 428
Query: 411 PNAVIWRTLLGACTIHG 427
+ +W ++G +HG
Sbjct: 429 RDVFVWSAMIGGLAMHG 445
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 153/313 (48%), Gaps = 12/313 (3%)
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYA--AFGHVKDACKVFELMSERDLV 210
I + +R +QTH IR G S + + L M A +F ++ A KVF+ + + +
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 211 AWNSVINGFASNGKPNEALTLFREMASEG-VEPDGYTMVSLFSACAELGALALGRRAHTY 269
AWN++I +AS P ++ F +M SE P+ YT L A AE+ +L+LG+ H
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 270 VWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEA 329
K + +V V N+L+ Y CG + +A +VF +++++ VSW++++ G G +A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 330 LELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVD 389
LELFK+ME VT VGVL AC+ ++ G + +E + + M+D
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAMLD 275
Query: 390 LLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGD 449
+ + G ++ A M N V W T+L I S E AR L + K D
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAI---SEDYEAAREVLNSMPQK---D 328
Query: 450 YVLLSNLY-AYEQ 461
V + L AYEQ
Sbjct: 329 IVAWNALISAYEQ 341
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/597 (39%), Positives = 359/597 (60%), Gaps = 52/597 (8%)
Query: 61 QVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHN--------IFSHVQDPNIFTWN 112
Q+HA +RH + L+ Y +++L +YA + +F DP++F +
Sbjct: 47 QIHAAILRHNLLLHPR-------YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFT 99
Query: 113 TMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRN 172
I + + A LY ++ S I P+ T+ LLK+ S + G+ H+ ++
Sbjct: 100 AAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKF 155
Query: 173 GFESLVFVQNSLVHMYAAFGHVKDACKVFELMSER------------------------- 207
G +V LV +YA G V A KVF+ M ER
Sbjct: 156 GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 208 ------DLVAWNSVINGFASNGKPNEALTLFREMASEGV-EPDGYTMVSLFSACAELGAL 260
D+V+WN +I+G+A +G PN+AL LF+++ +EG +PD T+V+ SAC+++GAL
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 261 ALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGL 320
GR H +V + NV V L+D YSKCG + A VF + +++ V+W+ ++ G
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 321 AVNGFGKEALELFKEME-IGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMP 379
A++G+ ++AL LF EM+ I G P ++TF+G L AC+H G+V+EG F+ M EYGI P
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 380 KIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTL 439
KIEH+GC+V LLGRAG +K+AYE I+NM M ++V+W ++LG+C +HG + + L
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455
Query: 440 LQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMG 499
+ L K+SG YVLLSN+YA + V +VR M ++ + K PG S +E+ N+V EF G
Sbjct: 456 IGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAG 515
Query: 500 DRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLV 559
DR H +++EI+ ML +I++++K GYVP T V D+EE EKE +L HSE++AIA+ L+
Sbjct: 516 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 575
Query: 560 NTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
+T PG+P+++ KNLRVC+DCH KLISK+ R+IV+RDR+RFHHF DG CSC D+W
Sbjct: 576 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/564 (41%), Positives = 345/564 (61%), Gaps = 17/564 (3%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHN-------IFSHVQDPNIFTWN 112
KQVH H + +NN + + VS + +Y+ N I + ++ WN
Sbjct: 437 KQVHV----HAIKINN------VSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWN 486
Query: 113 TMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRN 172
M+ GY +S + ++L++ MH G + D T + K L + G+Q H+ AI++
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 173 GFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLF 232
G++ ++V + ++ MY G + A F+ + D VAW ++I+G NG+ A +F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 233 REMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKC 292
+M GV PD +T+ +L A + L AL GR+ H K+ +++ V +L+D Y+KC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 293 GIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVL 352
G I A +F+ + N +W+ ++VGLA +G GKE L+LFK+M+ G P +VTF+GVL
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 353 YACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPN 412
ACSH G+V E + + + M +YGI P+IEH+ C+ D LGRAGLVKQA I++M M +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 413 AVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRT 472
A ++RTLL AC + G + + + LL+LEP S YVLLSN+YA +W ++ R
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 846
Query: 473 MVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENV 532
M +VKK PG S +E+ N++ F + DRS+ QTE I+ + ++ + +K EGYVP T+
Sbjct: 847 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 906
Query: 533 FADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSR 592
D+EEEEKE AL YHSEK+A+AF L++T P TP+RV+KNLRVC DCH A+K I+KVY+R
Sbjct: 907 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNR 966
Query: 593 EIVVRDRSRFHHFKDGHCSCRDYW 616
EIV+RD +RFH FKDG CSC DYW
Sbjct: 967 EIVLRDANRFHRFKDGICSCGDYW 990
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 20/325 (6%)
Query: 112 NTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIR 171
N + Y S ++ ++ M S ++ D T+ +L K+ + +G+Q H +A++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 172 NGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTL 231
G + ++ V NSL++MY A VF+ MSERDL++WNSVI G A NG EA+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 232 FREMASEGVEPDGYTMVSLFSACAEL-GALALGRRAHTYVWKVGLSDNVNVNNALLDFYS 290
F ++ G++PD YTM S+ A + L L+L ++ H + K+ + V+ AL+D YS
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 291 KCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVG 350
+ + A+ +F E + V+W+ ++ G + G + L+LF M G + T
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 351 VLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVK--------QAYE 402
V C +++G + Y I G +DL +G++ A +
Sbjct: 523 VFKTCGFLFAINQG-----KQVHAYAIKS-----GYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 403 YIQNMLMPPNAVIWRTLLGACTIHG 427
+ + + P+ V W T++ C +G
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENG 597
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 35/273 (12%)
Query: 99 IFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLAD 158
+F + ++ WN M++ Y E A++L S H SG+ P+ T L+ +++++
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARIS- 256
Query: 159 VRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVING 218
G+ + + ++ +F + DA V E++ N ++
Sbjct: 257 ---GDDSDAGQVK------------------SFANGNDASSVSEIIFR------NKGLSE 289
Query: 219 FASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDN 278
+ +G+ + L F +M VE D T + + + ++ +LALG++ H K+GL
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 279 VNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEI 338
+ V+N+L++ Y K A+ VF M +R+ +SW++++ G+A NG EA+ LF ++
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 339 GGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRM 371
G P + T VL A S + EG S K++
Sbjct: 410 CGLKPDQYTMTSVLKAASS---LPEGLSLSKQV 439
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 146 YPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMS 205
+ FL AI+ +D+ +G+ TH+ + F+ N+L+ MY+ G + A +VF+ M
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 206 ERDLVAWNSVINGFASNGKP-----NEALTLFREMASEGVEPDGYTMVSLFSACAELGAL 260
+RDLV+WNS++ +A + + +A LFR + + V T+ + C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 261 ALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGL 320
H Y K+GL + V AL++ Y K G + + +F EM R+ V W+ ++
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 321 AVNGFGKEALELFKEMEIGGFVPGEVTF 348
GF +EA++L G P E+T
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 75 NPDLGKYLIYAIVSL---SFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESA-----NPLL 126
NP+ ++LI ++S+ ++YA +F + D ++ +WN+++ YA+S+ N
Sbjct: 71 NPE--RFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQ 128
Query: 127 AVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVH 186
A L+ + + T +LK V E H A + G + FV +LV+
Sbjct: 129 AFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVN 188
Query: 187 MYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYT 246
+Y FG VK+ +FE M RD+V WN ++ + G EA+ L S G+ P+ T
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 247 M 247
+
Sbjct: 249 L 249
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/567 (41%), Positives = 348/567 (61%), Gaps = 44/567 (7%)
Query: 93 MSYAHNIFSHVQDPNI--FTWNTMIRGYA---ESANPLLAVELYSKMHVSGIKPDTHTYP 147
++YA+ IF H++ + F WN +IR S + +Y +M + PD HT+P
Sbjct: 8 IAYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 148 FLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVK------------ 195
FLL + + +G++TH+ + G + FV+ SL++MY++ G ++
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 196 -------------------DACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMA 236
DA K+F+ M ER++++W+ +ING+ GK EAL LFREM
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 237 -----SEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSK 291
V P+ +TM ++ SAC LGAL G+ H Y+ K + ++ + AL+D Y+K
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 292 CGIIIAAQRVFREM-RKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV-PGEVTFV 349
CG + A+RVF + K++ ++S ++ LA+ G E +LF EM + P VTFV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 350 GVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLM 409
G+L AC H G+++EG SYFK M +E+GI P I+H+GCMVDL GR+GL+K+A +I +M M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 410 PPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEV 469
P+ +IW +LL + G E A L++L+P +SG YVLLSN+YA RW+ V+ +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 470 RRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRT 529
R M + + K PG S VE+ V EF +GD S ++E I+AML EI ++L+ GYV T
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT 486
Query: 530 ENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKV 589
+ V D+ E++KE ALSYHSEK+AIAF L+ T PGTPVR++KNLR+C DCHL +K+ISK+
Sbjct: 487 KEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKL 546
Query: 590 YSREIVVRDRSRFHHFKDGHCSCRDYW 616
+SREIVVRD +RFHHF+DG CSCRD+W
Sbjct: 547 FSREIVVRDCNRFHHFRDGSCSCRDFW 573
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/604 (39%), Positives = 353/604 (58%), Gaps = 21/604 (3%)
Query: 22 RVKSLYHSTPASQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKY 81
R SLY P P ++ C +L + S K +Q F + + +++
Sbjct: 68 RKLSLY---PTRSSFPCA--IKACSSLFDI-FSGKQTHQQAFVFGYQSDIFVSSA----- 116
Query: 82 LIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKP 141
+ + S + A +F + NI +W +MIRGY + N L AV L+ + V
Sbjct: 117 -LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175
Query: 142 DTHTY------PFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGH-- 193
D + ++ A S++ + E HS I+ GF+ V V N+L+ YA G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 194 VKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEP-DGYTMVSLFS 252
V A K+F+ + ++D V++NS+++ +A +G NEA +FR + V + T+ ++
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 253 ACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVS 312
A + GAL +G+ H V ++GL D+V V +++D Y KCG + A++ F M+ +N S
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 313 WSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMK 372
W+ ++ G ++G +ALELF M G P +TFV VL ACSH G+ EG+ +F MK
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 373 DEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIA 432
+G+ P +EH+GCMVDLLGRAG +++AY+ IQ M M P+++IW +LL AC IH + +A
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Query: 433 EIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNR 492
EI+ + L +L+ + G Y+LLS++YA RW +V+ VR M + K PG SL+EL
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Query: 493 VFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKI 552
V F +GD HPQ E+I+ LAE+ +KL GYV T +V D++EEEKE L HSEK+
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595
Query: 553 AIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSC 612
AIAF ++NT PG+ V VVKNLRVC+DCH IKLISK+ RE VVRD RFHHFKDG CSC
Sbjct: 596 AIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSC 655
Query: 613 RDYW 616
DYW
Sbjct: 656 GDYW 659
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 182/345 (52%), Gaps = 21/345 (6%)
Query: 102 HVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRM 161
+V ++F+WN++I A S + A+ +S M + P ++P +KA S L D+
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 162 GEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFAS 221
G+QTH A G++S +FV ++L+ MY+ G ++DA KVF+ + +R++V+W S+I G+
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 222 NGKPNEALTLFREM------ASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
NG +A++LF+++ + + D +VS+ SAC+ + A L H++V K G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 276 SDNVNVNNALLDFYSKCGI--IIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELF 333
V+V N LLD Y+K G + A+++F ++ ++ VS+++++ A +G EA E+F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 334 KEMEIGGFVP-GEVTFVGVLYACSHCGMVDEGFSYFKR-----MKDEYGIMPKIEHFGCM 387
+ + V +T VL A SH G + G + ++D+ + I C
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 388 VDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIA 432
GR ++A++ ++N N W ++ +HGH+A A
Sbjct: 335 C---GRVETARKAFDRMKN----KNVRSWTAMIAGYGMHGHAAKA 372
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 351/559 (62%), Gaps = 3/559 (0%)
Query: 59 LKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGY 118
LK++H +S++ N +L A + +SYA +F ++ + +WN +I G+
Sbjct: 414 LKELHCYSLKQEFVYN--ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 119 AESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLV 178
A+S +P L+++ + +M +SG+ PD+ T LL A SKL +R+G++ H IRN E +
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 179 FVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE 238
FV S++ +Y G + +F+ M ++ LV+WN+VI G+ NG P+ AL +FR+M
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 239 GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAA 298
G++ G +M+ +F AC+ L +L LGR AH Y K L D+ + +L+D Y+K G I +
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 299 QRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHC 358
+VF +++++ SW+ +++G ++G KEA++LF+EM+ G P ++TF+GVL AC+H
Sbjct: 652 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 359 GMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYI-QNMLMPPNAVIWR 417
G++ EG Y +MK +G+ P ++H+ C++D+LGRAG + +A + + M + IW+
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 418 TLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKER 477
+LL +C IH + + E + L +LEP+ +YVLLSNLYA +W +V++VR+ M +
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 478 VKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIE 537
++K G S +EL +VF F +G+R EEI ++ + + K+ GY P T +V D+
Sbjct: 832 LRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLS 891
Query: 538 EEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVR 597
EEEK + L HSEK+A+ + L+ T+ GT +RV KNLR+C DCH A KLISKV REIVVR
Sbjct: 892 EEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVR 951
Query: 598 DRSRFHHFKDGHCSCRDYW 616
D RFHHFK+G CSC DYW
Sbjct: 952 DNKRFHHFKNGVCSCGDYW 970
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 13/328 (3%)
Query: 41 VVRKCITLLQVCASSKHKL----KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYA 96
+VR+ + LL + AS K K +++H + L N D+ I + ++ +
Sbjct: 82 LVREALGLL-LQASGKRKDIEMGRKIHQL-VSGSTRLRNDDVLCTRIITMYAMCGSPDDS 139
Query: 97 HNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKM-HVSGIKPDTHTYPFLLKAISK 155
+F ++ N+F WN +I Y+ + +E + +M + + PD TYP ++KA +
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
++DV +G H + ++ G VFV N+LV Y G V DA ++F++M ER+LV+WNS+
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 216 INGFASNGKPNEALTLFREMASEGVE----PDGYTMVSLFSACAELGALALGRRAHTYVW 271
I F+ NG E+ L EM E + PD T+V++ CA + LG+ H +
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 272 KVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALE 331
K+ L + +NNAL+D YSKCG I AQ +F+ +N VSW+T+V G + G +
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 332 LFKEMEIGG--FVPGEVTFVGVLYACSH 357
+ ++M GG EVT + + C H
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 62 VHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIR----- 116
VH ++ G+ + + +G L+ + F ++ A +F + + N+ +WN+MIR
Sbjct: 209 VHGLVVKTGL-VEDVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 117 GYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFES 176
G++E + LL E+ + PD T +L ++ ++ +G+ H A++ +
Sbjct: 267 GFSEESFLLLG-EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 177 LVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREM- 235
+ + N+L+ MY+ G + +A +F++ + +++V+WN+++ GF++ G + + R+M
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 236 -ASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGI 294
E V+ D T+++ C L + H Y K N V NA + Y+KCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 295 IIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYA 354
+ AQRVF +R + SW+ L+ G A + + +L+ +M+I G +P T +L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 355 CS 356
CS
Sbjct: 506 CS 507
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/564 (40%), Positives = 352/564 (62%), Gaps = 9/564 (1%)
Query: 58 KLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRG 117
+L+QVHA I G + L K + A + + ++Y H +F V P+ F +N++I+
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARA--IAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 118 YAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESL 177
++ PL V Y +M S + P +T+ ++K+ + L+ +R+G+ H A+ +GF
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 178 VFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMAS 237
+VQ +LV Y+ G ++ A +VF+ M E+ +VAWNS+++GF NG +EA+ +F +M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 238 EGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIA 297
G EPD T VSL SACA+ GA++LG H Y+ GL NV + AL++ YS+CG +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 298 AQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIG-GFVPGEVTFVGVLYACS 356
A+ VF +M++ N +W+ ++ +G+G++A+ELF +ME G +P VTFV VL AC+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 357 HCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAV-- 414
H G+V+EG S +KRM Y ++P +EH CMVD+LGRAG + +AY++I + A
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 415 -IWRTLLGACTIHGHSAIA-EIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRT 472
+W +LGAC +H + + EIA+ L+ LEP + G +V+LSN+YA + V +R
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKR-LIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 473 MVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENV 532
M++ ++K G+S++E+ N+ + F MGD SH +T EI+ L + + K GY P +E V
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 533 FADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSR 592
+EEEEKE AL YHSEK+A+AF L+ T + +VKNLR+C DCH A K IS V +R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNR 559
Query: 593 EIVVRDRSRFHHFKDGHCSCRDYW 616
+I VRD+ RFHHF++G CSC DYW
Sbjct: 560 QITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/593 (39%), Positives = 354/593 (59%), Gaps = 14/593 (2%)
Query: 33 SQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP 92
SQE +S ++ LL +C + L A + + N D +L ++ +
Sbjct: 70 SQE---SSPSQQTYELLILCCGHRSSLSD--ALRVHRHILDNGSDQDPFLATKLIGMYSD 124
Query: 93 M---SYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFL 149
+ YA +F + I+ WN + R + + + LY KM+ G++ D TY ++
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 150 LKAI----SKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMS 205
LKA + + G++ H+ R G+ S V++ +LV MYA FG V A VF M
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 206 ERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE--PDGYTMVSLFSACAELGALALG 263
R++V+W+++I +A NGK EAL FREM E + P+ TMVS+ ACA L AL G
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 264 RRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVN 323
+ H Y+ + GL + V +AL+ Y +CG + QRVF M R+ VSW++L+ V+
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 324 GFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEH 383
G+GK+A+++F+EM G P VTFV VL ACSH G+V+EG F+ M ++GI P+IEH
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 384 FGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLE 443
+ CMVDLLGRA + +A + +Q+M P +W +LLG+C IHG+ +AE A L LE
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 444 PKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSH 503
PK++G+YVLL+++YA Q W V+ V++ + ++K PG +E+ +++ F D +
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 504 PQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAP 563
P E+IHA L ++ + +K +GY+P+T+ V ++E EEKE + HSEK+A+AF L+NT+
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSK 604
Query: 564 GTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
G P+R+ KNLR+C DCHL K ISK +EI+VRD +RFH FK+G CSC DYW
Sbjct: 605 GEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 16/227 (7%)
Query: 210 VAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTY 269
++ N +I GK +A+ + + +S P T L C +L+ R H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 270 VWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEA 329
+ G + + L+ YS G + A++VF + RKR W+ L L + G G+E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 330 LELFKEMEIGGFVPGEVTFVGVLYAC-------SHCGMVDEGFSYFKRMKDEYGIMPKIE 382
L L+ +M G T+ VL AC +H E ++ R G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR----GYSSHVY 218
Query: 383 HFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS 429
+VD+ R G V A Y+ + N V W ++ +G +
Sbjct: 219 IMTTLVDMYARFGCVDYA-SYVFGGMPVRNVVSWSAMIACYAKNGKA 264
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 334/558 (59%), Gaps = 5/558 (0%)
Query: 60 KQVHAFSIRHGV-PLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGY 118
K++H +++R G L N +YA + A +F + + N+ +WN+MI Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCG---SLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 119 AESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLV 178
++ NP A+ ++ KM G+KP + L A + L D+ G H +++ G + V
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 179 FVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE 238
V NSL+ MY V A +F + R LV+WN++I GFA NG+P +AL F +M S
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 239 GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAA 298
V+PD +T VS+ +A AEL + H V + L NV V AL+D Y+KCG I+ A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 299 QRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHC 358
+ +F M +R+ +W+ ++ G +GFGK ALELF+EM+ G P VTF+ V+ ACSH
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 359 GMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRT 418
G+V+ G F MK+ Y I ++H+G MVDLLGRAG + +A+++I M + P ++
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 419 LLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERV 478
+LGAC IH + AE A L +L P G +VLL+N+Y W V +VR +M+++ +
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 479 KKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEE 538
+KTPG S+VE+ N V FF G +HP +++I+A L ++ +K GYVP T N+ +E
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGVEN 731
Query: 539 EEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRD 598
+ KE LS HSEK+AI+F L+NT GT + V KNLRVCADCH A K IS V REIVVRD
Sbjct: 732 DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRD 791
Query: 599 RSRFHHFKDGHCSCRDYW 616
RFHHFK+G CSC DYW
Sbjct: 792 MQRFHHFKNGACSCGDYW 809
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 232/489 (47%), Gaps = 66/489 (13%)
Query: 5 LMHSKQPSYEEISDLPCRVKSLYHSTPASQENPITSVVRKCITLLQVCASSKHKL--KQV 62
L H+ + ++SDL K+L ++ + VV LL+VC K++
Sbjct: 102 LYHTMLKGFAKVSDLD---KALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 63 HAFSIRHGVPLNNPDLGKYLIYAIVSLS------FPMSYAHNIFSHVQDPNIFTWNTMIR 116
H ++ G L+ ++A+ L ++ A +F + + ++ +WNT++
Sbjct: 158 HGLLVKSGFSLD--------LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209
Query: 117 GYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFES 176
GY+++ +A+E+ M +KP T +L A+S L + +G++ H A+R+GF+S
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 177 LVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMA 236
LV + +LV MYA G ++ A ++F+ M ER++V+WNS+I+ + N P EA+ +F++M
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 237 SEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIII 296
EGV+P +++ ACA+LG L GR H ++GL NV+V N+L+ Y KC +
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 297 AAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACS 356
A +F +++ R VSW+ +++G A NG +AL F +M P T+V V+ A +
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 357 H-----------------------------------CGMVDEGFSYFKRMKDEYGIMPKI 381
CG + F M + + +
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-----V 504
Query: 382 EHFGCMVDLLGRAGLVKQA---YEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARST 438
+ M+D G G K A +E +Q + PN V + +++ AC+ HS + E
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS---HSGLVEAGLKC 561
Query: 439 LLQLEPKHS 447
++ +S
Sbjct: 562 FYMMKENYS 570
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 186/330 (56%), Gaps = 4/330 (1%)
Query: 48 LLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPN 107
LL+ C+S K +L+Q+ ++G L + + ++ + A +F +
Sbjct: 43 LLERCSSLK-ELRQILPLVFKNG--LYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 108 IFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHS 167
++TM++G+A+ ++ A++ + +M ++P + + +LLK A++R+G++ H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 168 VAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNE 227
+ +++GF +F L +MYA V +A KVF+ M ERDLV+WN+++ G++ NG
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 228 ALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLD 287
AL + + M E ++P T+VS+ A + L +++G+ H Y + G VN++ AL+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 288 FYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVT 347
Y+KCG + A+++F M +RN VSW++++ N KEA+ +F++M G P +V+
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 348 FVGVLYACSHCGMVDEGFSYFKRMKDEYGI 377
+G L+AC+ G ++ G + ++ E G+
Sbjct: 340 VMGALHACADLGDLERG-RFIHKLSVELGL 368
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 343/571 (60%), Gaps = 4/571 (0%)
Query: 48 LLQVC--ASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQD 105
+L+ C ASS+ +H+ ++ G N+ + +I S S ++ AH +F + D
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCG--FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 106 PNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQT 165
++ TW + GY S A++L+ KM G+KPD++ +L A + D+ GE
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 166 HSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKP 225
+ FV+ +LV++YA G ++ A VF+ M E+D+V W+++I G+ASN P
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 226 NEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNAL 285
E + LF +M E ++PD +++V S+CA LGAL LG + + + N+ + NAL
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 286 LDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGE 345
+D Y+KCG + VF+EM++++ V + + GLA NG K + +F + E G P
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 346 VTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQ 405
TF+G+L C H G++ +G +F + Y + +EH+GCMVDL GRAG++ AY I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 406 NMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLN 465
+M M PNA++W LL C + + +AE L+ LEP ++G+YV LSN+Y+ RW
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 466 VQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGY 525
EVR M K+ +KK PG+S +EL +V EF D+SHP +++I+A L ++ +++L G+
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGF 594
Query: 526 VPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKL 585
VP TE VF D+EEEEKE L YHSEK+A+A L++T G +RVVKNLRVC DCH +KL
Sbjct: 595 VPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKL 654
Query: 586 ISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
ISK+ REIVVRD +RFH F +G CSC DYW
Sbjct: 655 ISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 215/415 (51%), Gaps = 15/415 (3%)
Query: 39 TSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVP----LNNPDLGKYLIYAIVSLSFPMS 94
TS V++ TL+ V + H LKQ+H I H + L N L + L +
Sbjct: 10 TSKVQQIKTLISVACTVNH-LKQIHVSLINHHLHHDTFLVNLLLKRTLFFR------QTK 62
Query: 95 YAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAIS 154
Y++ +FSH Q PNIF +N++I G+ + ++L+ + G+ T+P +LKA +
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 155 KLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNS 214
+ + ++G HS+ ++ GF V SL+ +Y+ G + DA K+F+ + +R +V W +
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 215 VINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVG 274
+ +G+ ++G+ EA+ LF++M GV+PD Y +V + SAC +G L G Y+ ++
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 275 LSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFK 334
+ N V L++ Y+KCG + A+ VF M +++ V+WST++ G A N F KE +ELF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 335 EMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRA 394
+M P + + VG L +C+ G +D G + + D + + + ++D+ +
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 395 GLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS--AIAEIARSTLLQLEPKHS 447
G + + +E + M + VI + +GH + A ++ L + P S
Sbjct: 362 GAMARGFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 350/572 (61%), Gaps = 18/572 (3%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYA 119
K++HA+++++G N +G L+ + +S +F + D I WN MI GY+
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS-GRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 120 ESANPLLAVELYSKMHVS-GIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLV 178
++ + A+ L+ M S G+ ++ T ++ A + E H ++ G +
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 179 FVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREM--- 235
FVQN+L+ MY+ G + A ++F M +RDLV WN++I G+ + +AL L +M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 236 ---ASEG-----VEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLD 287
S+G ++P+ T++++ +CA L ALA G+ H Y K L+ +V V +AL+D
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 288 FYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVT 347
Y+KCG + +++VF ++ ++N ++W+ +++ ++G G+EA++L + M + G P EVT
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 348 FVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNM 407
F+ V ACSH GMVDEG F MK +YG+ P +H+ C+VDLLGRAG +K+AY+ +
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-- 678
Query: 408 LMPPN---AVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWL 464
+MP + A W +LLGA IH + I EIA L+QLEP + YVLL+N+Y+ W
Sbjct: 679 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 738
Query: 465 NVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEG 524
EVRR M ++ V+K PG S +E G+ V +F GD SHPQ+E++ L + ++++ EG
Sbjct: 739 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
Query: 525 YVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIK 584
YVP T V ++EE+EKE L HSEK+AIAF ++NT+PGT +RV KNLRVC DCHLA K
Sbjct: 799 YVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATK 858
Query: 585 LISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
ISK+ REI++RD RFH FK+G CSC DYW
Sbjct: 859 FISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 149/286 (52%), Gaps = 14/286 (4%)
Query: 92 PMSYAHNIFSHVQD-PNIFT--------WNTMIRGYAESANPLLAVELYSKMHVSGIKPD 142
P S ++ S V P+IF W ++R S AV Y M V GIKPD
Sbjct: 37 PTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPD 96
Query: 143 THTYPFLLKAISKLADVRMGEQTHSVAIRNGFE-SLVFVQNSLVHMYAAFGHVKDACKVF 201
+ +P LLKA++ L D+ +G+Q H+ + G+ V V N+LV++Y G KVF
Sbjct: 97 NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 156
Query: 202 ELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELG--- 258
+ +SER+ V+WNS+I+ S K AL FR M E VEP +T+VS+ +AC+ L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 259 ALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVV 318
L +G++ H Y + G N + N L+ Y K G + +++ + R+ V+W+T++
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 319 GLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEG 364
L N EALE +EM + G P E T VL ACSH M+ G
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 181/399 (45%), Gaps = 21/399 (5%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYA 119
KQ+HA + G +++ + L+ + + +F + + N +WN++I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 120 ESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLA---DVRMGEQTHSVAIRNGFES 176
+A+E + M ++P + T ++ A S L + MG+Q H+ +R G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 177 LVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMA 236
F+ N+LV MY G + + + RDLV WN+V++ N + EAL REM
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 237 SEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVG-LSDNVNVNNALLDFYSKCGII 295
EGVEPD +T+ S+ AC+ L L G+ H Y K G L +N V +AL+D Y C +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 296 IAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEM-EIGGFVPGEVTFVGVLYA 354
++ +RVF M R W+ ++ G + N KEAL LF M E G + T GV+ A
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 355 CSHCGMVDEGFSYFKRMKDEYGIMPK----IEHF--GCMVDLLGRAGLVKQAYEYIQNML 408
C G F R + +G + K + F ++D+ R G + A M
Sbjct: 415 CVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM- 466
Query: 409 MPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHS 447
+ V W T++ H A + + LE K S
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/578 (39%), Positives = 358/578 (61%), Gaps = 6/578 (1%)
Query: 43 RKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLI-YAIVSLSFPMSYAHNIFS 101
R + +LQ C S K KL+++H+ I +G+ ++P + +L+ + VS++ +S+A +F
Sbjct: 6 RVIVRMLQGCNSMK-KLRKIHSHVIINGLQ-HHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 102 HVQ-DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGI-KPDTHTYPFLLKAISKLADV 159
H DP+ WN +IRG++ S++PL ++ Y++M +S + +PD T+ F LK+ ++ +
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 160 RMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGF 219
+ H IR+GF V SLV Y+A G V+ A KVF+ M RDLV+WN +I F
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 220 ASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNV 279
+ G N+AL++++ M +EGV D YT+V+L S+CA + AL +G H + V
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243
Query: 280 NVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIG 339
V+NAL+D Y+KCG + A VF MRKR+ ++W+++++G V+G G EA+ F++M
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 340 GFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQ 399
G P +TF+G+L CSH G+V EG +F+ M ++ + P ++H+GCMVDL GRAG ++
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 400 AYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAY 459
+ E I + V+WRTLLG+C IH + + E+A L+QLE ++GDYVL++++Y+
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 460 EQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKK 519
+R+ + ++ PG S +E+G++V +F + D+ HP++ I++ L E+ +
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483
Query: 520 LKLEGYVPRTENVFA-DIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCAD 578
L GY P N A + + A + HSEK+AIA+ L+ T GT +R+ KNLRVC D
Sbjct: 484 AILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRD 543
Query: 579 CHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
CH K +SK ++REI+VRDR RFHHF DG CSC DYW
Sbjct: 544 CHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/579 (39%), Positives = 351/579 (60%), Gaps = 14/579 (2%)
Query: 46 ITLLQVC--ASSKHKLKQVHAFSIRHGVP----LNNPDLGKYLIYAIVSLSFPMSYAHNI 99
++LL C A ++ +H++SI+HG+ ++N + Y + + +
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG------RLRDCQKV 304
Query: 100 FSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADV 159
F + ++ +WN++I+ Y + PL A+ L+ +M +S I+PD T L +S+L D+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 160 RMGEQTHSVAIRNG-FESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVING 218
R +R G F + + N++V MYA G V A VF + D+++WN++I+G
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 219 FASNGKPNEALTLFREMASEG-VEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSD 277
+A NG +EA+ ++ M EG + + T VS+ AC++ GAL G + H + K GL
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 278 NVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEME 337
+V V +L D Y KCG + A +F ++ + N+V W+TL+ +G G++A+ LFKEM
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 338 IGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLV 397
G P +TFV +L ACSH G+VDEG F+ M+ +YGI P ++H+GCMVD+ GRAG +
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 398 KQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLY 457
+ A ++I++M + P+A IW LL AC +HG+ + +IA L ++EP+H G +VLLSN+Y
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 458 AYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEIT 517
A +W V E+R + ++KTPG S +E+ N+V F+ G+++HP EE++ L +
Sbjct: 665 ASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQ 724
Query: 518 KKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCA 577
KLK+ GYVP V D+E++EKE L HSE++AIAF L+ T T +R+ KNLRVC
Sbjct: 725 AKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCG 784
Query: 578 DCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
DCH K ISK+ REI+VRD +RFHHFK+G CSC DYW
Sbjct: 785 DCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 192/363 (52%), Gaps = 10/363 (2%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + ++ +WN MI GY +S N A+ L + + D+ T LL A ++
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
D G HS +I++G ES +FV N L+ +YA FG ++D KVF+ M RDL++WNS+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVG- 274
I + N +P A++LF+EM ++PD T++SL S ++LG + R + + G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 275 LSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFK 334
+++ + NA++ Y+K G++ +A+ VF + + +SW+T++ G A NGF EA+E++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 335 EMEIGGFVPG-EVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGR 393
ME G + + T+V VL ACS G + +G R+ G+ + + D+ G+
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGK 498
Query: 394 AGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQ--LEPKHSGDYV 451
G ++ A + N+V W TL+ HGH A + +L ++P H
Sbjct: 499 CGRLEDALSLFYQ-IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 452 LLS 454
LLS
Sbjct: 558 LLS 560
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 21/347 (6%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSK-MHVSGIKPDTHTYPFLLK 151
++ A + F H+Q+ +++ WN MI GY + N + +S M SG+ PD T+P +LK
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161
Query: 152 AISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVA 211
A + D G + H +A++ GF V+V SL+H+Y+ + V +A +F+ M RD+ +
Sbjct: 162 ACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 212 WNSVINGFASNGKPNEALTLFREMASEGVEP-DGYTMVSLFSACAELGALALGRRAHTYV 270
WN++I+G+ +G EALTL S G+ D T+VSL SAC E G G H+Y
Sbjct: 219 WNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 271 WKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEAL 330
K GL + V+N L+D Y++ G + Q+VF M R+ +SW++++ +N A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 331 ELFKEMEIGGFVPGEVTFVGVLYACSHCGMVD-----EGFSYFKRMKDEYGIMPKIEHFG 385
LF+EM + P +T + + S G + +GF+ K + I
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW-----FLEDITIGN 388
Query: 386 CMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIA 432
+V + + GLV A + N L + + W T++ +G ++ A
Sbjct: 389 AVVVMYAKLGLVDSA-RAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 18/311 (5%)
Query: 113 TMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRN 172
++IR ++ SAN L + + + S D HT L + + L + H+ + +
Sbjct: 29 SVIREFSASANALQ--DCWKNGNESKEIDDVHT---LFRYCTNLQSAKC---LHARLVVS 80
Query: 173 GFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLF 232
V + LV++Y G+V A F+ + RD+ AWN +I+G+ G +E + F
Sbjct: 81 KQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCF 140
Query: 233 RE-MASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSK 291
M S G+ PD T S+ AC + G + H K G +V V +L+ YS+
Sbjct: 141 SLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 292 CGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGV 351
+ A+ +F EM R+ SW+ ++ G +G KEAL L + VT V +
Sbjct: 198 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSL 253
Query: 352 LYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPP 411
L AC+ G + G + ++G+ ++ ++DL G ++ + M +
Sbjct: 254 LSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV-R 311
Query: 412 NAVIWRTLLGA 422
+ + W +++ A
Sbjct: 312 DLISWNSIIKA 322
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 335/556 (60%), Gaps = 5/556 (0%)
Query: 61 QVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAE 120
Q+H+ + + G ++ L ++ ++ S + +F + P+I +N MI GY
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFI--SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 121 SANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFV 180
+ L++ L+ ++ +SG + + T L+ L + H +++ F S V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASV 356
Query: 181 QNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGV 240
+L +Y+ ++ A K+F+ E+ L +WN++I+G+ NG +A++LFREM
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 241 EPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQR 300
P+ T+ + SACA+LGAL+LG+ H V ++ V+ AL+ Y+KCG I A+R
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 301 VFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGM 360
+F M K+N V+W+T++ G ++G G+EAL +F EM G P VTF+ VLYACSH G+
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 361 VDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLL 420
V EG F M YG P ++H+ CMVD+LGRAG +++A ++I+ M + P + +W TLL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 421 GACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKK 480
GAC IH + +A L +L+P + G +VLLSN+++ ++ + VR+T K ++ K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 481 TPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEE 540
PG++L+E+G F GD+SHPQ +EI+ L ++ K++ GY P TE D+EEEE
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEE 716
Query: 541 KEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRS 600
+E + HSE++AIAF L+ T PGT +R++KNLRVC DCH KLISK+ R IVVRD +
Sbjct: 717 RELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDAN 776
Query: 601 RFHHFKDGHCSCRDYW 616
RFHHFKDG CSC DYW
Sbjct: 777 RFHHFKDGVCSCGDYW 792
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 167/311 (53%), Gaps = 4/311 (1%)
Query: 53 ASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWN 112
++S L Q HA I HG N+ L L + L + YA +IF VQ P++F +N
Sbjct: 30 STSISHLAQTHAQIILHGFR-NDISLLTKLTQRLSDLG-AIYYARDIFLSVQRPDVFLFN 87
Query: 113 TMIRGYAESANPLLAVELYSKMHVS-GIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIR 171
++RG++ + +P ++ +++ + S +KP++ TY F + A S D R G H A+
Sbjct: 88 VLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 172 NGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTL 231
+G +S + + +++V MY F V+DA KVF+ M E+D + WN++I+G+ N E++ +
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 232 FREMASEG-VEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYS 290
FR++ +E D T++ + A AEL L LG + H+ K G + V + YS
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 291 KCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVG 350
KCG I +FRE RK + V+++ ++ G NG + +L LFKE+ + G T V
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 351 VLYACSHCGMV 361
++ H ++
Sbjct: 328 LVPVSGHLMLI 338
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/631 (37%), Positives = 343/631 (54%), Gaps = 75/631 (11%)
Query: 59 LKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGY 118
L+ VH+ I + N+ LG L+ A SL ++ A +F + + N+ N MIR Y
Sbjct: 58 LRTVHSRIILEDLRCNSS-LGVKLMRAYASLK-DVASARKVFDEIPERNVIIINVMIRSY 115
Query: 119 AESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLV 178
+ V+++ M ++PD +T+P +LKA S + +G + H A + G S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 179 FVQ-------------------------------NSLVHMYAAFGHVKDACKV------- 200
FV NSLV YA DA +V
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 201 ------------------------------FELMSERDLVAWNSVINGFASNGKPNEALT 230
F M ++ LV+WN +I + N P EA+
Sbjct: 236 KISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 231 LFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYS 290
L+ M ++G EPD ++ S+ AC + AL+LG++ H Y+ + L N+ + NAL+D Y+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 291 KCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVG 350
KCG + A+ VF M+ R+ VSW+ ++ +G G +A+ LF +++ G VP + FV
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 351 VLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMP 410
L ACSH G+++EG S FK M D Y I P++EH CMVDLLGRAG VK+AY +IQ+M M
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 411 PNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVR 470
PN +W LLGAC +H + I +A L QL P+ SG YVLLSN+YA RW V +R
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 535
Query: 471 RTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTE 530
M + +KK PG S VE+ + F +GDRSHPQ++EI+ L + KK+K GYVP +E
Sbjct: 536 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE 595
Query: 531 NVFADIEEEEKEDALSYHSEKIAIAFMLVNTA-----PGTPVRVVKNLRVCADCHLAIKL 585
+ D+EEE+KE L+ HSEK+AI F L+NT +R+ KNLR+C DCH+A KL
Sbjct: 596 SALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKL 655
Query: 586 ISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
IS++ SREI++RD +RFH F+ G CSC DYW
Sbjct: 656 ISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 140 KPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACK 199
K T L + + D+R HS I + L+ YA+ V A K
Sbjct: 36 KSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 200 VFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGA 259
VF+ + ER+++ N +I + +NG E + +F M V PD YT + AC+ G
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 260 LALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVG 319
+ +GR+ H KVGLS + V N L+ Y KCG + A+ V EM +R+ VSW++LVVG
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 320 LAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMP 379
A N +ALE+ +EME T +L A S+ E Y K M + G
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMG-KK 272
Query: 380 KIEHFGCMVDLLGRAGLVKQAYEYIQNML---MPPNAVIWRTLLGAC 423
+ + M+ + + + +A E M P+AV ++L AC
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/526 (39%), Positives = 324/526 (61%), Gaps = 1/526 (0%)
Query: 92 PMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLK 151
+ A +F + D ++ ++ +MI GYA AV+L+ +M GI PD +T +L
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 152 AISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVA 211
++ + G++ H N +FV N+L+ MYA G +++A VF M +D+++
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 212 WNSVINGFASNGKPNEALTLFREMASEG-VEPDGYTMVSLFSACAELGALALGRRAHTYV 270
WN++I G++ N NEAL+LF + E PD T+ + ACA L A GR H Y+
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525
Query: 271 WKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEAL 330
+ G + +V N+L+D Y+KCG ++ A +F ++ ++ VSW+ ++ G ++GFGKEA+
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 331 ELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDL 390
LF +M G E++FV +LYACSH G+VDEG+ +F M+ E I P +EH+ C+VD+
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 391 LGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDY 450
L R G + +AY +I+NM +PP+A IW LL C IH +AE + +LEP+++G Y
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 451 VLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIH 510
VL++N+YA ++W V+ +R+ + + ++K PG S +E+ RV F GD S+P+TE I
Sbjct: 706 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIE 765
Query: 511 AMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVV 570
A L ++ ++ EGY P T+ D EE EKE+AL HSEK+A+A ++++ G +RV
Sbjct: 766 AFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVT 825
Query: 571 KNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
KNLRVC DCH K +SK+ REIV+RD +RFH FKDGHCSCR +W
Sbjct: 826 KNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 6/382 (1%)
Query: 43 RKCITLLQVCASSK--HKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIF 100
R ++LQ+CA SK K+V F IR + + +LG L + + A +F
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVIDSNLGSKLSLMYTNCG-DLKEASRVF 152
Query: 101 SHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVR 160
V+ WN ++ A+S + ++ L+ KM SG++ D++T+ + K+ S L V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 161 MGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFA 220
GEQ H +++GF V NSLV Y V A KVF+ M+ERD+++WNS+ING+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 221 SNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVN 280
SNG + L++F +M G+E D T+VS+F+ CA+ ++LGR H+ K S
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 281 VNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGG 340
N LLD YSKCG + +A+ VFREM R+ VS+++++ G A G EA++LF+EME G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 341 FVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQA 400
P T VL C+ ++DEG + +K E + I ++D+ + G +++A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 401 YEYIQNMLMPPNAVIWRTLLGA 422
E + + + + + W T++G
Sbjct: 452 -ELVFSEMRVKDIISWNTIIGG 472
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 194/380 (51%), Gaps = 17/380 (4%)
Query: 55 SKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTM 114
S H +Q+H F ++ G N +G L+ A + + A +F + + ++ +WN++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNS-VGNSLV-AFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 115 IRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGF 174
I GY + + ++ +M VSGI+ D T + + + +G HS+ ++ F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 175 ESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFRE 234
N+L+ MY+ G + A VF MS+R +V++ S+I G+A G EA+ LF E
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 235 MASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGI 294
M EG+ PD YT+ ++ + CA L G+R H ++ + L ++ V+NAL+D Y+KCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 295 IIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFK-EMEIGGFVPGEVTFVGVLY 353
+ A+ VF EMR ++ +SW+T++ G + N + EAL LF +E F P E T VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 354 ACSHCGMVDEGFSYFKRMKDEYGIMPKIEHF------GCMVDLLGRAGLVKQAYEYIQNM 407
AC+ D+G ++ +G + + +F +VD+ + G + A+ +
Sbjct: 508 ACASLSAFDKG-------REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD- 559
Query: 408 LMPPNAVIWRTLLGACTIHG 427
+ + V W ++ +HG
Sbjct: 560 IASKDLVSWTVMIAGYGMHG 579
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 52/396 (13%)
Query: 67 IRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLL 126
IR GV + KY+I+ SL +I + D ++ NT +R + ES N
Sbjct: 27 IRSGVRVR-----KYVIFNRASLRTVSDCVDSITTF--DRSVTDANTQLRRFCESGNLEN 79
Query: 127 AVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVH 186
AV+L I P T L A SK ++ G++ + NGF + + L
Sbjct: 80 AVKLLCVSGKWDIDPRTLCSVLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSL 137
Query: 187 MYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYT 246
MY G +K+A +VF+ + + WN ++N A +G + ++ LF++M S GVE D YT
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 247 MVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR 306
+ + + L ++ G + H ++ K G + +V N+L+ FY K + +A++VF EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 307 KRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYAC----------- 355
+R+ +SW++++ G NG ++ L +F +M + G T V V C
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 356 ------------------------SHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLL 391
S CG +D + F+ M D + + M+
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR-----SVVSYTSMIAGY 372
Query: 392 GRAGLVKQA---YEYIQNMLMPPNAVIWRTLLGACT 424
R GL +A +E ++ + P+ +L C
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/526 (41%), Positives = 323/526 (61%), Gaps = 3/526 (0%)
Query: 93 MSYAHNIFSHVQDP--NIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLL 150
+ A +F + P I +W ++ YA++ P+ A+E++S+M +KPD +L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 151 KAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLV 210
A + L D++ G H+ ++ G E + SL MYA G V A +F+ M +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 211 AWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYV 270
WN++I+G+A NG EA+ +F EM ++ V PD ++ S SACA++G+L R + YV
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 271 WKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEAL 330
+ D+V +++AL+D ++KCG + A+ VF R+ V WS ++VG ++G +EA+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 331 ELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDL 390
L++ ME GG P +VTF+G+L AC+H GMV EG+ +F RM D + I P+ +H+ C++DL
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDL 468
Query: 391 LGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDY 450
LGRAG + QAYE I+ M + P +W LL AC H H + E A L ++P ++G Y
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHY 528
Query: 451 VLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIH 510
V LSNLYA + W V EVR M ++ + K G S VE+ R+ F +GD+SHP+ EEI
Sbjct: 529 VQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIE 588
Query: 511 AMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVV 570
+ I +LK G+V + D+ +EE E+ L HSE+IAIA+ L++T GTP+R+
Sbjct: 589 RQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRIT 648
Query: 571 KNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
KNLR C +CH A KLISK+ REIVVRD +RFHHFKDG CSC DYW
Sbjct: 649 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 221/409 (54%), Gaps = 9/409 (2%)
Query: 53 ASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWN 112
A+ K +LKQ+HA + G+ + + K LI+A S +++A +F + P IF WN
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFLITK-LIHASSSFG-DITFARQVFDDLPRPQIFPWN 88
Query: 113 TMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRN 172
+IRGY+ + + A+ +YS M ++ + PD+ T+P LLKA S L+ ++MG H+ R
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 173 GFESLVFVQNSLVHMYAAFGHVKDACKVFE--LMSERDLVAWNSVINGFASNGKPNEALT 230
GF++ VFVQN L+ +YA + A VFE + ER +V+W ++++ +A NG+P EAL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 231 LFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYS 290
+F +M V+PD +VS+ +A L L GR H V K+GL ++ +L Y+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 291 KCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVG 350
KCG + A+ +F +M+ N + W+ ++ G A NG+ +EA+++F EM P ++
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 351 VLYACSHCGMVDEGFSYFKRM-KDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLM 409
+ AC+ G +++ S ++ + + +Y + ++D+ + G V+ A + + +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCGSVEGA-RLVFDRTL 385
Query: 410 PPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYA 458
+ V+W ++ +HG + A I+ ++ H D L L A
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREA-ISLYRAMERGGVHPNDVTFLGLLMA 433
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 33/319 (10%)
Query: 122 ANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQ 181
A+PLL SGI D+ Y L+ + + A ++ Q H+ + G + F+
Sbjct: 8 ASPLLYTN-------SGIHSDSF-YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLI 56
Query: 182 NSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE 241
L+H ++FG + A +VF+ + + WN++I G++ N +AL ++ M V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 242 PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRV 301
PD +T L AC+ L L +GR H V+++G +V V N L+ Y+KC + +A+ V
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 302 FR--EMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCG 359
F + +R VSW+ +V A NG EALE+F +M P V V VL A
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA----- 231
Query: 360 MVDEGFSYFKRMKDEYGIMPKIEHFGCMV--DLL-------GRAGLVKQAYEYIQNMLMP 410
F+ + +K I + G + DLL + G V A + + + +
Sbjct: 232 -----FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA-KILFDKMKS 285
Query: 411 PNAVIWRTLLGACTIHGHS 429
PN ++W ++ +G++
Sbjct: 286 PNLILWNAMISGYAKNGYA 304
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 340/563 (60%), Gaps = 7/563 (1%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYA 119
KQ+H+++IR G+ +++ + +YA S + +F ++D ++ +W +I GY
Sbjct: 289 KQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 120 ESAN-PLLAVELYSKMHVSG-IKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESL 177
++ N A+ L+S+M G ++P+ T+ KA L+D R+G+Q A + G S
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 178 VFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMAS 237
V NS++ M+ ++DA + FE +SE++LV++N+ ++G N +A L E+
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 238 EGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIA 297
+ +T SL S A +G++ G + H+ V K+GLS N V NAL+ YSKCG I
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 298 AQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSH 357
A RVF M RN +SW++++ G A +GF LE F +M G P EVT+V +L ACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 358 CGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWR 417
G+V EG+ +F M +++ I PK+EH+ CMVDLL RAGL+ A+E+I M + ++WR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 418 TLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKER 477
T LGAC +H ++ + ++A +L+L+P Y+ LSN+YA +W E+RR M +
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 478 VKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIE 537
+ K G S +E+G+++ +F++GD +HP +I+ L + ++K GYVP T+ V +E
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767
Query: 538 EEEKEDA----LSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSRE 593
EE E L HSEKIA+AF L++T+ PVRV KNLRVC DCH A+K IS V RE
Sbjct: 768 EENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGRE 827
Query: 594 IVVRDRSRFHHFKDGHCSCRDYW 616
IV+RD +RFHHFKDG CSC DYW
Sbjct: 828 IVLRDLNRFHHFKDGKCSCNDYW 850
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 171/334 (51%), Gaps = 20/334 (5%)
Query: 37 PITSVVRKCITLLQVCASSKH-KL-KQVHAFSIRHGVPLNNPDLGKY-LIYAIVSLSFPM 93
P+ SV +LL+ C ++ +L K VHA I + PD Y + ++ S S
Sbjct: 59 PMDSVTFS--SLLKSCIRARDFRLGKLVHARLIEFDIE---PDSVLYNSLISLYSKSGDS 113
Query: 94 SYAHNIFSHVQ---DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLL 150
+ A ++F ++ ++ +W+ M+ Y + L A++++ + G+ P+ + Y ++
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 151 KAISKLADVRMGEQTHSVAIRNG-FESLVFVQNSLVHMYA-AFGHVKDACKVFELMSERD 208
+A S V +G T ++ G FES V V SL+ M+ ++A KVF+ MSE +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 209 LVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHT 268
+V W +I G P EA+ F +M G E D +T+ S+FSACAEL L+LG++ H+
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 269 YVWKVGLSDNVNVNNALLDFYSKC---GIIIAAQRVFREMRKRNAVSWSTLVVGLAVN-G 324
+ + GL D+V +L+D Y+KC G + ++VF M + +SW+ L+ G N
Sbjct: 294 WAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 325 FGKEALELFKEMEIGGFV-PGEVTFVGVLYACSH 357
EA+ LF EM G V P TF AC +
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 85 AIVSLSFPMSYAHNIFSHVQDPN-IFTWNTMIRGYAESANPLLAVELYSKMHVSGIKP-D 142
A++S SFP I S N I + +I + + + AV M GI+P D
Sbjct: 2 AMISFSFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMD 61
Query: 143 THTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFE 202
+ T+ LLK+ + D R+G+ H+ I E + NSL+ +Y+ G A VFE
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 203 LM---SERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGA 259
M +RD+V+W++++ + +NG+ +A+ +F E G+ P+ Y ++ AC+
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 260 LALGRRAHTYVWKVG-LSDNVNVNNALLDFYSKC-GIIIAAQRVFREMRKRNAVSWSTLV 317
+ +GR ++ K G +V V +L+D + K A +VF +M + N V+W+ ++
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 318 VGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACS 356
GF +EA+ F +M + GF + T V AC+
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 223 GKPNEALTLFREMASEGVEP-DGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNV 281
G A++ MA +G+ P D T SL +C LG+ H + + + + +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 282 NNALLDFYSKCGIIIAAQRVFREMR---KRNAVSWSTLVVGLAVNGFGKEALELFKEMEI 338
N+L+ YSK G A+ VF MR KR+ VSWS ++ NG +A+++F E
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 339 GGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHF------GC-MVDLL 391
G VP + + V+ ACS+ V G + G + K HF GC ++D+
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVG-------RVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 392 GRA-GLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHG 427
+ + AY+ M N V W ++ C G
Sbjct: 213 VKGENSFENAYKVFDKM-SELNVVTWTLMITRCMQMG 248
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 338/581 (58%), Gaps = 14/581 (2%)
Query: 39 TSVVRKCIT---LLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSY 95
++++KC L+Q H L+ + RH + + N L Y + +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSI----FRHDIVMGNTLLNMY------AKCGSLEE 113
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + + TW T+I GY++ P A+ +++M G P+ T ++KA +
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
G Q H ++ GF+S V V ++L+ +Y +G + DA VF+ + R+ V+WN++
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
I G A +AL LF+ M +G P ++ SLF AC+ G L G+ H Y+ K G
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
N LLD Y+K G I A+++F + KR+ VSW++L+ A +GFGKEA+ F+E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 336 MEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAG 395
M G P E++F+ VL ACSH G++DEG+ Y++ MK + GI+P+ H+ +VDLLGRAG
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAG 412
Query: 396 LVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSN 455
+ +A +I+ M + P A IW+ LL AC +H ++ + A + +L+P G +V+L N
Sbjct: 413 DLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYN 472
Query: 456 LYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAE 515
+YA RW + VR+ M + VKK P S VE+ N + F D HPQ EEI E
Sbjct: 473 IYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEE 532
Query: 516 ITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRV 575
+ K+K GYVP T +V ++++E+E L YHSEKIA+AF L+NT PG+ + + KN+RV
Sbjct: 533 VLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRV 592
Query: 576 CADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
C DCH AIKL SKV REI+VRD +RFHHFKDG+CSC+DYW
Sbjct: 593 CGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 122 ANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQ 181
+N LL + + S I D Y LLK + + G H+ +++ F + +
Sbjct: 39 SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98
Query: 182 NSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE 241
N+L++MYA G +++A KVFE M +RD V W ++I+G++ + +P +AL F +M G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 242 PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRV 301
P+ +T+ S+ A A G + H + K G NV+V +ALLD Y++ G++ AQ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 302 FREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMV 361
F + RN VSW+ L+ G A ++ALELF+ M GF P ++ + ACS G +
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 362 DEGFSYFKRMKDEYGIMP--KIEHFG--CMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWR 417
++G + Y I K+ F ++D+ ++G + A + I + L + V W
Sbjct: 279 EQG-----KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK-IFDRLAKRDVVSWN 332
Query: 418 TLLGACTIHG 427
+LL A HG
Sbjct: 333 SLLTAYAQHG 342
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/524 (41%), Positives = 322/524 (61%), Gaps = 14/524 (2%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTH--TYPFLLKAI 153
A +F ++FTW M+ GY ++ A EL+ KM P+ + ++ +L
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGY 322
Query: 154 SKLADVRMGEQTHSV-AIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
+ + M ++ V RN V N+++ YA G + +A +F+ M +RD V+W
Sbjct: 323 VQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK 272
++I G++ +G EAL LF +M EG + + S S CA++ AL LG++ H + K
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
G V NALL Y KCG I A +F+EM ++ VSW+T++ G + +GFG+ AL
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLG 392
F+ M+ G P + T V VL ACSH G+VD+G YF M +YG+MP +H+ CMVDLLG
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 393 RAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVL 452
RAGL++ A+ ++NM P+A IW TLLGA +HG++ +AE A + +EP++SG YVL
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 453 LSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAM 512
LSNLYA RW +V ++R M + VKK PG+S +E+ N+ F +GD HP+ +EI A
Sbjct: 618 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 677
Query: 513 LAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKN 572
L E+ ++K GYV +T V D+EEEEKE + YHSE++A+A+ ++ + G P+RV+KN
Sbjct: 678 LEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKN 737
Query: 573 LRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
LRVC DCH AIK ++++ R I++RD +RFHHFKDG CSC DYW
Sbjct: 738 LRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 127/234 (54%), Gaps = 2/234 (0%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
+S A N+F + + +W MI GY++S + A+ L+ +M G + + ++ L
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
+ + + +G+Q H ++ G+E+ FV N+L+ MY G +++A +F+ M+ +D+V+W
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRA-HTYVW 271
N++I G++ +G AL F M EG++PD TMV++ SAC+ G + GR+ +T
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 272 KVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAVNG 324
G+ N ++D + G++ A + + M + +A W TL+ V+G
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + + ++ +WN MI+GY + N A EL+ I P
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE------IMP-------------- 153
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
E V N+++ YA G V DA VF+ M E++ V+WN++
Sbjct: 154 -------------------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRR---AHTYVWK 272
++ + N K EA LF+ + +L S LG ++ A +
Sbjct: 195 LSAYVQNSKMEEACMLFKSREN----------WALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
+ + D V+ N ++ Y++ G I A+++F E ++ +W+ +V G N +EA EL
Sbjct: 245 MNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRM---KDEYGIMP--KIEHFGCM 387
F +M EV++ +L G+ +RM K+ + +MP + + M
Sbjct: 304 FDKMP----ERNEVSWNAML----------AGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 388 VDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS 429
+ + G + +A M + V W ++ + GHS
Sbjct: 350 ITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 51/273 (18%)
Query: 182 NSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLF-----REMA 236
N + Y G +A +VF+ M V++N +I+G+ NG+ A LF R++
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 237 SEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIII 296
S V GY EL + R ++ N +L Y++ G +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSW-------------NTMLSGYAQNGCVD 174
Query: 297 AAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEME----------IGGFVPGE- 345
A+ VF M ++N VSW+ L+ N +EA LFK E +GGFV +
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 346 ----------------VTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVD 389
V++ ++ + G +DE F DE + + + MV
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQD-VFTWTAMVS 289
Query: 390 LLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
+ +V++A E M N V W +L
Sbjct: 290 GYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG 321
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 272 KVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALE 331
K G SD + N + Y + G A RVF+ M + ++VS++ ++ G NG + A +
Sbjct: 58 KCGDSD-IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARK 116
Query: 332 LFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIE--HFGCMVD 389
LF EM V V G + + G E F IMP+ + + M+
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRN-RNLGKARELFE----------IMPERDVCSWNTMLS 165
Query: 390 LLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
+ G V A M N V W LL A
Sbjct: 166 GYAQNGCVDDARSVFDRMP-EKNDVSWNALLSA 197
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/580 (37%), Positives = 340/580 (58%), Gaps = 13/580 (2%)
Query: 40 SVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPM---SYA 96
S+++ CI L + +Q+H+ I+ LN Y+ ++ + + A
Sbjct: 495 SILKTCIRLGDLELG-----EQIHSQIIKTNFQLN-----AYVCSVLIDMYAKLGKLDTA 544
Query: 97 HNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKL 156
+I ++ +W TMI GY + A+ + +M GI+ D + A + L
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 157 ADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVI 216
++ G+Q H+ A +GF S + QN+LV +Y+ G ++++ FE D +AWN+++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 217 NGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLS 276
+GF +G EAL +F M EG++ + +T S A +E + G++ H + K G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 277 DNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEM 336
V NAL+ Y+KCG I A++ F E+ +N VSW+ ++ + +GFG EAL+ F +M
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 337 EIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGL 396
P VT VGVL ACSH G+VD+G +YF+ M EYG+ PK EH+ C+VD+L RAGL
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 844
Query: 397 VKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNL 456
+ +A E+IQ M + P+A++WRTLL AC +H + I E A LL+LEP+ S YVLLSNL
Sbjct: 845 LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 904
Query: 457 YAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEI 516
YA ++W R+ M ++ VKK PG S +E+ N + F++GD++HP +EIH ++
Sbjct: 905 YAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964
Query: 517 TKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVC 576
TK+ GYV ++ +++ E+K+ + HSEK+AI+F L++ P+ V+KNLRVC
Sbjct: 965 TKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1024
Query: 577 ADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
DCH IK +SKV +REI+VRD RFHHF+ G CSC+DYW
Sbjct: 1025 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 187/373 (50%), Gaps = 18/373 (4%)
Query: 59 LKQVHAF----SIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTM 114
++Q+HA +R + NP + Y V L A +F ++ + +W M
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL------ARRVFDGLRLKDHSSWVAM 259
Query: 115 IRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGF 174
I G +++ A+ L+ M+V GI P + + +L A K+ + +GEQ H + ++ GF
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 175 ESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFRE 234
S +V N+LV +Y G++ A +F MS+RD V +N++ING + G +A+ LF+
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 235 MASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGI 294
M +G+EPD T+ SL AC+ G L G++ H Y K+G + N + ALL+ Y+KC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 295 IIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYA 354
I A F E N V W+ ++V + + + +F++M+I VP + T+ +L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 355 CSHCGMVDEGFSYFKR-MKDEYGIMPKIEHFGC--MVDLLGRAGLVKQAYEYIQNMLMPP 411
C G ++ G + +K + ++ + C ++D+ + G + A++ I
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWD-ILIRFAGK 554
Query: 412 NAVIWRTLLGACT 424
+ V W T++ T
Sbjct: 555 DVVSWTTMIAGYT 567
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 6/374 (1%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYL-IYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGY 118
+Q+HA++ + G NN G L +YA + + A + F + N+ WN M+ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCA---DIETALDYFLETEVENVVLWNVMLVAY 465
Query: 119 AESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLV 178
+ + ++ +M + I P+ +TYP +LK +L D+ +GEQ HS I+ F+
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 179 FVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE 238
+V + L+ MYA G + A + + +D+V+W ++I G+ ++ALT FR+M
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 239 GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAA 298
G+ D + + SACA L AL G++ H G S ++ NAL+ YS+CG I +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 299 QRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHC 358
F + + ++W+ LV G +G +EAL +F M G TF + A S
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 359 GMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRT 418
+ +G + + G + E ++ + + G + A + + N V W
Sbjct: 706 ANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE-VSTKNEVSWNA 763
Query: 419 LLGACTIHGHSAIA 432
++ A + HG + A
Sbjct: 764 IINAYSKHGFGSEA 777
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 13/333 (3%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAI-- 153
A +F + + IFTWN MI+ A L+ +M + P+ T+ +L+A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 154 -SKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
S DV EQ H+ + G V N L+ +Y+ G V A +VF+ + +D +W
Sbjct: 199 GSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK 272
++I+G + N EA+ LF +M G+ P Y S+ SAC ++ +L +G + H V K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
+G S + V NAL+ Y G +I+A+ +F M +R+AV+++TL+ GL+ G+G++A+EL
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEG---FSYFKRMKDEYGIMPKIEHFGCMVD 389
FK M + G P T ++ ACS G + G +Y ++ + KIE G +++
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG--FASNNKIE--GALLN 432
Query: 390 LLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
L + ++ A +Y + N V+W +L A
Sbjct: 433 LYAKCADIETALDYFLETEV-ENVVLWNVMLVA 464
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 10/373 (2%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMS---YAHNIFSHVQDPNIFTWNTMIR 116
+Q+H ++ G + Y+ A+VSL F + A +IFS++ + T+NT+I
Sbjct: 308 EQLHGLVLKLGFSSDT-----YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 117 GYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFES 176
G ++ A+EL+ +MH+ G++PD++T L+ A S + G+Q H+ + GF S
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 177 LVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMA 236
++ +L+++YA ++ A F ++V WN ++ + + +FR+M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 237 SEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIII 296
E + P+ YT S+ C LG L LG + H+ + K N V + L+D Y+K G +
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 297 AAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACS 356
A + ++ VSW+T++ G F +AL F++M G EV + AC+
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 357 HCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIW 416
+ EG G + +V L R G ++++Y + N + W
Sbjct: 603 GLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAW 660
Query: 417 RTLLGACTIHGHS 429
L+ G++
Sbjct: 661 NALVSGFQQSGNN 673
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 20/318 (6%)
Query: 138 GIKPDTHTYPFLLKAISKL-ADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKD 196
GI+P+ T +LL+ K + G + HS ++ G +S + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 197 ACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAE 256
A KVF+ M ER + WN +I AS E LF M SE V P+ T + AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 257 LGALALG--RRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWS 314
G++A + H + GL D+ V N L+D YS+ G + A+RVF +R ++ SW
Sbjct: 199 -GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 315 TLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDE 374
++ GL+ N EA+ LF +M + G +P F VL AC ++ G +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-------EQL 310
Query: 375 YGIMPKI----EHFGC--MVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTI--H 426
+G++ K+ + + C +V L G + A E+I + + +AV + TL+ + +
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISA-EHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 427 GHSAIAEIARSTLLQLEP 444
G A+ R L LEP
Sbjct: 370 GEKAMELFKRMHLDGLEP 387
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 237 SEGVEPDGYTMVSLFSACAEL-GALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGII 295
+ G+ P+ T+ L C + G+L GR+ H+ + K+GL N ++ L DFY G +
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 296 IAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYAC 355
A +VF EM +R +W+ ++ LA E LF M P E TF GVL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 317/547 (57%), Gaps = 35/547 (6%)
Query: 105 DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQ 164
+ NI +WN ++ G+ S AV ++ K+H G PD T +L ++ + MG
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 165 THSVAIRNGFESLVFVQNSLVHMYAAFGHV------------------------------ 194
H I+ G V ++++ MY GHV
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 195 -KDACKVFELMSER----DLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVS 249
A ++FEL E+ ++V+W S+I G A NGK EAL LFREM GV+P+ T+ S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 250 LFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRN 309
+ AC + AL GR H + +V L DNV+V +AL+D Y+KCG I +Q VF M +N
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 310 AVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFK 369
V W++L+ G +++G KE + +F+ + P ++F +L AC G+ DEG+ YFK
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 370 RMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS 429
M +EYGI P++EH+ CMV+LLGRAG +++AY+ I+ M P++ +W LL +C + +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 430 AIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVEL 489
+AEIA L LEP++ G YVLLSN+YA + W V +R M +KK PG S +++
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 490 GNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHS 549
NRV+ GD+SHPQ ++I + EI+K+++ G+ P + D+EE+E+E L HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693
Query: 550 EKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGH 609
EK+A+ F L+NT GTP++V+KNLR+C DCH IK IS REI +RD +RFHHFKDG
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753
Query: 610 CSCRDYW 616
CSC D+W
Sbjct: 754 CSCGDFW 760
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 185/407 (45%), Gaps = 84/407 (20%)
Query: 99 IFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLAD 158
+ + DP I++++++I ++ ++ ++S+M G+ PD+H P L K ++L+
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 159 VRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERD---------- 208
++G+Q H V+ +G + FVQ S+ HMY G + DA KVF+ MS++D
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 209 -------------------------LVAWNSVINGFASNGKPNEALTLFREMASEGVEPD 243
+V+WN +++GF +G EA+ +F+++ G PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 244 GYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFR 303
T+ S+ + + L +GR H YV K GL + V +A++D Y K G + +F
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 304 EMR-----------------------------------KRNAVSWSTLVVGLAVNGFGKE 328
+ + N VSW++++ G A NG E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 329 ALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIE-----H 383
ALELF+EM++ G P VT +L AC + + G + +G ++ H
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-------RSTHGFAVRVHLLDNVH 424
Query: 384 FG-CMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHS 429
G ++D+ + G + + + + NM+ N V W +L+ ++HG +
Sbjct: 425 VGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 45/200 (22%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYA 119
+ H F++R + L+N +G LI ++ + +F+ + N+ WN+++ G++
Sbjct: 408 RSTHGFAVRVHL-LDNVHVGSALIDMYAKCG-RINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 120 ESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVF 179
+ ++ + + +KPD ++ LL A ++
Sbjct: 466 MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV----------------------- 502
Query: 180 VQNSLVHMYAAFGHVKDACKVFELMSER-----DLVAWNSVINGFASNGKPNEALTLFRE 234
G + K F++MSE L ++ ++N GK EA L +E
Sbjct: 503 ------------GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 235 MASEGVEPDGYTMVSLFSAC 254
M EPD +L ++C
Sbjct: 551 MP---FEPDSCVWGALLNSC 567
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 338/559 (60%), Gaps = 35/559 (6%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKM-HVSGIKPDTHTYPFLLK 151
M A F + + +I TWN+MI G+ + L A++++SKM S + PD T +L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 152 AISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACK------------ 199
A + L + +G+Q HS + GF+ V N+L+ MY+ G V+ A +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 200 ---------------------VFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE 238
+F + +RD+VAW ++I G+ +G EA+ LFR M
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 239 GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAA 298
G P+ YT+ ++ S + L +L+ G++ H K G +V+V+NAL+ Y+K G I +A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 299 QRVFREMR-KRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSH 357
R F +R +R+ VSW+++++ LA +G +EALELF+ M + G P +T+VGV AC+H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 358 CGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWR 417
G+V++G YF MKD I+P + H+ CMVDL GRAGL+++A E+I+ M + P+ V W
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 418 TLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKER 477
+LL AC +H + + ++A LL LEP++SG Y L+NLY+ +W ++R++M R
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647
Query: 478 VKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIE 537
VKK G S +E+ ++V F + D +HP+ EI+ + +I ++K GYVP T +V D+E
Sbjct: 648 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLE 707
Query: 538 EEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVR 597
EE KE L +HSEK+AIAF L++T T +R++KNLRVC DCH AIK ISK+ REI+VR
Sbjct: 708 EEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVR 767
Query: 598 DRSRFHHFKDGHCSCRDYW 616
D +RFHHFKDG CSCRDYW
Sbjct: 768 DTTRFHHFKDGFCSCRDYW 786
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 177/414 (42%), Gaps = 68/414 (16%)
Query: 100 FSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADV 159
F + + +W TMI GY A+ + M GI+P T +L +++ +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 160 RMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGH------------VKD----------- 196
G++ HS ++ G V V NSL++MYA G V+D
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 197 --------ACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEG-VEPDGYTM 247
A FE M+ERD+V WNS+I+GF G AL +F +M + + PD +T+
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 248 VSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQR------- 300
S+ SACA L L +G++ H+++ G + V NAL+ YS+CG + A+R
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 301 --------------------------VFREMRKRNAVSWSTLVVGLAVNGFGKEALELFK 334
+F ++ R+ V+W+ ++VG +G EA+ LF+
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 335 EMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRA 394
M GG P T +L S + G + G + + ++ + +A
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 395 GLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIA-EIARSTLLQ-LEPKH 446
G + A + + V W +++ A HGH+ A E+ + L++ L P H
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 111/211 (52%), Gaps = 32/211 (15%)
Query: 179 FVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE 238
F N+++ Y+ G + C+ F+ + +RD V+W ++I G+ + G+ ++A+ + +M E
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 239 GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAA 298
G+EP +T+ ++ ++ A + G++ H+++ K+GL NV+V+N+LL+ Y+KCG + A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 299 QRV-------------------------------FREMRKRNAVSWSTLVVGLAVNGFGK 327
+ V F +M +R+ V+W++++ G G+
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 328 EALELFKEMEIGGFV-PGEVTFVGVLYACSH 357
AL++F +M + P T VL AC++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 267 HTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFG 326
H V K GL +V + N L++ YSK G + A+++F EM R A SW+T++ + G
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 327 KEALELFKEM 336
E F ++
Sbjct: 97 DSTCEFFDQL 106
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 283 NALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV 342
N +L YSK G + + F ++ +R++VSW+T++VG G +A+ + +M G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 343 PGEVTFVGVLYACSHCGMVDEG 364
P + T VL + + ++ G
Sbjct: 144 PTQFTLTNVLASVAATRCMETG 165
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/522 (41%), Positives = 315/522 (60%), Gaps = 1/522 (0%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + D + TWN MI G + + L+ +MH G PD +T + +
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 188
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
L V +G+Q H I+ G E + V +SL HMY G ++D V M R+LVAWN++
Sbjct: 189 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 248
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
I G A NG P L L++ M G P+ T V++ S+C++L G++ H K+G
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
S V V ++L+ YSKCG + A + F E + V WS+++ +G G EA+ELF
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368
Query: 336 M-EIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRA 394
M E EV F+ +LYACSH G+ D+G F M ++YG P ++H+ C+VDLLGRA
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428
Query: 395 GLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLS 454
G + QA I++M + + VIW+TLL AC IH ++ +A+ +LQ++P S YVLL+
Sbjct: 429 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 488
Query: 455 NLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLA 514
N++A +RW +V EVR++M + VKK G S E V +F MGDRS +++EI++ L
Sbjct: 489 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLK 548
Query: 515 EITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLR 574
E+T ++KL+GY P T +V D++EEEKE L HSEK+A+AF L+ G P+R++KNLR
Sbjct: 549 ELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLR 608
Query: 575 VCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
VC+DCH+A K IS + +REI +RD SRFHHF +G CSC DYW
Sbjct: 609 VCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 167/356 (46%), Gaps = 10/356 (2%)
Query: 107 NIFTWNTMIRGYAESANPLLAVELYSKMH----VSGIKPDTHTYPFLLKAISKLADVRMG 162
NIFT ++ + +S ++ ++H VSG D L+ SKL D
Sbjct: 39 NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSA 98
Query: 163 EQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASN 222
+ + + S N L++ Y G + +A KVF+ M +R L WN++I G
Sbjct: 99 VAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQF 154
Query: 223 GKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVN 282
E L+LFREM G PD YT+ S+FS A L ++++G++ H Y K GL ++ VN
Sbjct: 155 EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVN 214
Query: 283 NALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV 342
++L Y + G + + V R M RN V+W+TL++G A NG + L L+K M+I G
Sbjct: 215 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 274
Query: 343 PGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYE 402
P ++TFV VL +CS + +G + G + ++ + + G + A +
Sbjct: 275 PNKITFVTVLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 333
Query: 403 YIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYA 458
+ V+W +++ A HG A +T+ + + L+ LYA
Sbjct: 334 AFSER-EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 388
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/523 (40%), Positives = 324/523 (61%), Gaps = 2/523 (0%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A + + + N+ +W MI Y+++ + A+ ++++M S KP+ T+ +L + +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
+ + +G+Q H + ++ ++S +FV +SL+ MYA G +K+A ++FE + ERD+V+ ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
I G+A G EAL +F + SEG+ P+ T SL +A + L L G++AH +V + L
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
+ N+L+D YSKCG + A+R+F M +R A+SW+ ++VG + +G G+E LELF+
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRL 345
Query: 336 MEIGGFV-PGEVTFVGVLYACSHCGMVDEGFSYFKRM-KDEYGIMPKIEHFGCMVDLLGR 393
M V P VT + VL CSH M D G + F M EYG P EH+GC+VD+LGR
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGR 405
Query: 394 AGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLL 453
AG + +A+E+I+ M P A + +LLGAC +H I E L+++EP+++G+YV+L
Sbjct: 406 AGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVIL 465
Query: 454 SNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAML 513
SNLYA RW +V VR M+++ V K PG S ++ + F DR+HP+ EE+ A +
Sbjct: 466 SNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Query: 514 AEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNL 573
EI+ K+K GYVP V D++EE+KE L HSEK+A+ F L+ T G P+RV KNL
Sbjct: 526 KEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNL 585
Query: 574 RVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
R+C DCH K+ SKV+ RE+ +RD++RFH DG CSC DYW
Sbjct: 586 RICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 161/339 (47%), Gaps = 13/339 (3%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
M H FS P + T++ +N L E +M + G + H Y LL A
Sbjct: 5 MRLIHRSFS--SSPTNYVLQTILPISQLCSNGRLQ-EALLEMAMLGPEMGFHGYDALLNA 61
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
+R G++ H+ I+ + +++ L+ Y ++DA KV + M E+++V+W
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWK 272
++I+ ++ G +EALT+F EM +P+ +T ++ ++C L LG++ H + K
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
++ V ++LLD Y+K G I A+ +F + +R+ VS + ++ G A G +EALE+
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFS----YFKRMKDEYGIMPKIEHFGCMV 388
F + G P VT+ +L A S ++D G +R Y ++ ++
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN-----SLI 296
Query: 389 DLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHG 427
D+ + G + A NM A+ W +L + HG
Sbjct: 297 DMYSKCGNLSYARRLFDNM-PERTAISWNAMLVGYSKHG 334
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 44/234 (18%)
Query: 26 LYHSTPASQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVP----LNNPDLGKY 81
++H + +P +T L A H KQ H +R +P L N + Y
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHG-KQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 82 LIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSG-IK 140
S +SYA +F ++ + +WN M+ GY++ +EL+ M +K
Sbjct: 300 ------SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 141 PDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKV 200
PD T LL +S + RM + ++ F+ +V
Sbjct: 354 PDAVT---LLAVLSGCSHGRMEDTGLNI-----FDGMV---------------------A 384
Query: 201 FELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSAC 254
E ++ + +++ G+ +EA + M S +P + SL AC
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGAC 435
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 351/585 (60%), Gaps = 14/585 (2%)
Query: 35 ENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMS 94
E+ SV++ C L ++ +Q+H +++G L + ++ L+ A S M
Sbjct: 295 ESSFASVIKLCANLKEL-----RFTEQLHCSVVKYGF-LFDQNIRTALMVA-YSKCTAML 347
Query: 95 YAHNIFSHVQ-DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAI 153
A +F + N+ +W MI G+ ++ AV+L+S+M G++P+ TY +L A+
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 154 SKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWN 213
++ + H+ ++ +E V +L+ Y G V++A KVF + ++D+VAW+
Sbjct: 408 PVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 214 SVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGA-LALGRRAHTYVWK 272
+++ G+A G+ A+ +F E+ G++P+ +T S+ + CA A + G++ H + K
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALEL 332
L ++ V++ALL Y+K G I +A+ VF+ R+++ VSW++++ G A +G +AL++
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 333 FKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLG 392
FKEM+ VTF+GV AC+H G+V+EG YF M + I P EH CMVDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 393 RAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVL 452
RAG +++A + I+NM P + IWRT+L AC +H + + +A ++ ++P+ S YVL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 453 LSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAM 512
LSN+YA W +VR+ M + VKK PG+S +E+ N+ + F GDRSHP ++I+
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 513 LAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKN 572
L +++ +LK GY P T V DI++E KE L+ HSE++AIAF L+ T G+P+ ++KN
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 573 LRVCADCHLAIKLISKVYSREIVVRDRSRFHHF-KDGHCSCRDYW 616
LRVC DCHL IKLI+K+ REIVVRD +RFHHF DG CSC D+W
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 12/302 (3%)
Query: 83 IYAIVSLSFPMSY-AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKP 141
IY ++S Y AHN+F + ++ +++ G++ A L+ +H G++
Sbjct: 32 IYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM 91
Query: 142 DTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVF 201
D + +LK + L D G Q H I+ GF V V SLV Y + KD KVF
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 202 ELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALA 261
+ M ER++V W ++I+G+A N +E LTLF M +EG +P+ +T + AE G
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 262 LGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLA 321
G + HT V K GL + V+N+L++ Y KCG + A+ +F + ++ V+W++++ G A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 322 VNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACS-----------HCGMVDEGFSYFKR 370
NG EAL +F M + E +F V+ C+ HC +V GF + +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 371 MK 372
++
Sbjct: 332 IR 333
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 47 TLLQVCASSKHKL--KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQ 104
++L+V A+ +L +Q+H I+ G L++ +G L+ + S +F ++
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGS-NFKDGRKVFDEMK 155
Query: 105 DPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQ 164
+ N+ TW T+I GYA ++ + L+ +M G +P++ T+ L +++ G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 165 THSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGK 224
H+V ++NG + + V NSL+++Y G+V+ A +F+ + +V WNS+I+G+A+NG
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 225 PNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNA 284
EAL +F M V + S+ CA L L + H V K G + N+ A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 285 LLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVP 343
L+ YSKC ++ A R+F+E+ N VSW+ ++ G N +EA++LF EM+ G P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 344 GEVTFVGVLYA 354
E T+ +L A
Sbjct: 396 NEFTYSVILTA 406
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 349/582 (59%), Gaps = 16/582 (2%)
Query: 46 ITLLQVCASSK-HKL-KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSY---AHNIF 100
I+ L CAS K KL +Q+H S++ G+ LN + A+++L Y IF
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-----VSNALMTLYAETGYLNECRKIF 473
Query: 101 SHVQDPNIFTWNTMIRGYAESANPL-LAVELYSKMHVSGIKPDTHTYPFLLKAISKLADV 159
S + + + +WN++I A S L AV + +G K + T+ +L A+S L+
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 160 RMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSER-DLVAWNSVING 218
+G+Q H +A++N +N+L+ Y G + K+F M+ER D V WNS+I+G
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 219 FASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDN 278
+ N +AL L M G D + ++ SA A + L G H + L +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 279 VNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEI 338
V V +AL+D YSKCG + A R F M RN+ SW++++ G A +G G+EAL+LF+ M++
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 339 GGFVPGE-VTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLV 397
G P + VTFVGVL ACSH G+++EGF +F+ M D YG+ P+IEHF CM D+LGRAG +
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 398 KQAYEYIQNMLMPPNAVIWRTLLGACT-IHGHSA-IAEIARSTLLQLEPKHSGDYVLLSN 455
+ ++I+ M M PN +IWRT+LGAC +G A + + A L QLEP+++ +YVLL N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 456 LYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAE 515
+YA RW ++ + R+ M VKK G+S V + + V F GD+SHP + I+ L E
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 516 ITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGT-PVRVVKNLR 574
+ +K++ GYVP+T D+E+E KE+ LSYHSEK+A+AF+L T P+R++KNLR
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 575 VCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
VC DCH A K ISK+ R+I++RD +RFHHF+DG CSC D+W
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 7/271 (2%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
+ YA F ++ N +WN++I Y+++ + A ++S M G +P +T+ L+
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 153 ISKLA--DVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLV 210
L DVR+ EQ ++G + +FV + LV +A G + A KVF M R+ V
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAV 275
Query: 211 AWNSVINGFASNGKPNEALTLFREMASE-GVEPDGYT-MVSLFS--ACAELGALALGRRA 266
N ++ G EA LF +M S V P+ Y ++S F + AE L GR
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 267 HTYVWKVGLSD-NVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGF 325
H +V GL D V + N L++ Y+KCG I A+RVF M +++VSW++++ GL NG
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 326 GKEALELFKEMEIGGFVPGEVTFVGVLYACS 356
EA+E +K M +PG T + L +C+
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 59 LKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTMIRGY 118
L+Q+ + G+ L + +G L+ A S +SYA +F+ ++ N T N ++ G
Sbjct: 227 LEQIMCTIQKSGL-LTDLFVGSGLVSAFAK-SGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 119 AESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA-----ISKLADVRMGEQTHSVAIRNG 173
A +L+ M+ S I +Y LL + +++ ++ G + H I G
Sbjct: 285 VRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 174 F-ESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLF 232
+ +V + N LV+MYA G + DA +VF M+++D V+WNS+I G NG EA+ +
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 233 REMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKC 292
+ M + P +T++S S+CA L LG++ H K+G+ NV+V+NAL+ Y++
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 293 GIIIAAQRVFREMRKRNAVSWSTLVVGLA 321
G + +++F M + + VSW++++ LA
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 124/235 (52%), Gaps = 11/235 (4%)
Query: 166 HSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKP 225
HS +N + V++ N+L++ Y G A KVF+ M R+ V+W +++G++ NG+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 226 NEALTLFREMASEGVEPDGYTMVSLFSACAELGALAL--GRRAHTYVWKVGLSDNVNVNN 283
EAL R+M EG+ + Y VS+ AC E+G++ + GR+ H ++K+ + + V+N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 284 ALLDFYSKC-GIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV 342
L+ Y KC G + A F ++ +N+VSW++++ + G + A +F M+ G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 343 PGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLV 397
P E TF ++ + C + + ++ IM I+ G + DL +GLV
Sbjct: 204 PTEYTFGSLV--TTACSLTEPDVRLLEQ------IMCTIQKSGLLTDLFVGSGLV 250
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A +F + N +W ++ GY+ + A+ M GI + + + +L+A +
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 156 LADVRM--GEQTHSVAIRNGFESLVFVQNSLVHMY-AAFGHVKDACKVFELMSERDLVAW 212
+ V + G Q H + + + V N L+ MY G V A F + ++ V+W
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGA--LALGRRAHTYV 270
NS+I+ ++ G A +F M +G P YT SL + L + L + +
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 271 WKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEAL 330
K GL ++ V + L+ ++K G + A++VF +M RNAV+ + L+VGL +G+EA
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 331 ELFKEM 336
+LF +M
Sbjct: 295 KLFMDM 300
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 248 VSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRK 307
+S +C +G R H+ ++K L +V + N L++ Y + G ++A++VF EM
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 308 RNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSY 367
RN VSW+ +V G + NG KEAL ++M G + FV VL AC G V G +
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILF 122
Query: 368 FKRMKDEYGIMPKIEH 383
+++ +G+M K+ +
Sbjct: 123 GRQI---HGLMFKLSY 135
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/507 (40%), Positives = 303/507 (59%)
Query: 110 TWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVA 169
+W MI+G A++ A+E + +M V G+K D + + +L A L + G+Q H+
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 170 IRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEAL 229
IR F+ ++V ++L+ MY + A VF+ M ++++V+W +++ G+ G+ EA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 230 TLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFY 289
+F +M G++PD YT+ SACA + +L G + H GL V V+N+L+ Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 290 SKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFV 349
KCG I + R+F EM R+AVSW+ +V A G E ++LF +M G P VT
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 350 GVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLM 409
GV+ ACS G+V++G YFK M EYGI+P I H+ CM+DL R+G +++A +I M
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 410 PPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEV 469
PP+A+ W TLL AC G+ I + A +L++L+P H Y LLS++YA + +W +V ++
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 470 RRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRT 529
RR M ++ VKK PG S ++ ++ F D S P ++I+A L E+ K+ GY P T
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDT 656
Query: 530 ENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKV 589
V D+EE K L+YHSE++AIAF L+ G P+RV KNLRVC DCH A K IS V
Sbjct: 657 SFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSV 716
Query: 590 YSREIVVRDRSRFHHFKDGHCSCRDYW 616
REI+VRD RFH FKDG CSC D+W
Sbjct: 717 TGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 176/368 (47%), Gaps = 33/368 (8%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTH-TYPFLLK 151
+S + F + D + TWN +I GY+ S AV+ Y+ M T T +LK
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 152 AISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVF---------- 201
S V +G+Q H I+ GFES + V + L++MYA G + DA KVF
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 202 --ELMS------------------ERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE 241
LM E+D V+W ++I G A NG EA+ FREM +G++
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 242 PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRV 301
D Y S+ AC LGA+ G++ H + + D++ V +AL+D Y KC + A+ V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 302 FREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMV 361
F M+++N VSW+ +VVG G +EA+++F +M+ G P T + AC++ +
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 362 DEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLG 421
+EG S F G++ + +V L G+ G + + M + +AV W ++
Sbjct: 388 EEG-SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVS 445
Query: 422 ACTIHGHS 429
A G +
Sbjct: 446 AYAQFGRA 453
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 160/326 (49%), Gaps = 20/326 (6%)
Query: 37 PITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFP---M 93
P SV+ C L + ++ KQ+HA IR N Y+ A++ + +
Sbjct: 272 PFGSVLPACGGLGAI-----NEGKQIHACIIR-----TNFQDHIYVGSALIDMYCKCKCL 321
Query: 94 SYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAI 153
YA +F ++ N+ +W M+ GY ++ AV+++ M SGI PD +T + A
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 154 SKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWN 213
+ ++ + G Q H AI +G V V NSLV +Y G + D+ ++F M+ RD V+W
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 214 SVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVW-K 272
++++ +A G+ E + LF +M G++PDG T+ + SAC+ G + G+R + +
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 273 VGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAVNG---FGKE 328
G+ ++ + ++D +S+ G + A R M +A+ W+TL+ G GK
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 329 ALELFKEMEIGGFVPGEVTFVGVLYA 354
A E +E+ P T + +YA
Sbjct: 562 AAESL--IELDPHHPAGYTLLSSIYA 585
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 178 VFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMAS 237
+F N+L+ Y+ G + + FE + +RD V WN +I G++ +G A+ + M
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 238 E-GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIII 296
+ T++++ + G ++LG++ H V K+G + V + LL Y+ G I
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 297 AAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACS 356
A++VF + RN V +++L+ GL G ++AL+LF+ ME V++ ++ +
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVSWAAMIKGLA 246
Query: 357 HCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYE 402
G+ E F+ MK + G+ FG ++ G G + + +
Sbjct: 247 QNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQ 291
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 62/249 (24%)
Query: 178 VFVQNSLVHMYAAF-------------------------------GHVKDACKVFELMSE 206
F+ N++VH YA G + + FE + +
Sbjct: 41 TFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100
Query: 207 RDLVAWNSVINGFASNGKPNEALTLFREMASE-GVEPDGYTMVSLFSACAELGALALGRR 265
RD V WN +I G++ +G A+ + M + T++++ + G ++LG++
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQ 160
Query: 266 AHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRN---------------- 309
H V K+G + V + LL Y+ G I A++VF + RN
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 310 --------------AVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYAC 355
+VSW+ ++ GLA NG KEA+E F+EM++ G + F VL AC
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 356 SHCGMVDEG 364
G ++EG
Sbjct: 281 GGLGAINEG 289
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 337/580 (58%), Gaps = 8/580 (1%)
Query: 38 ITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAH 97
++SV+R C L + + K ++ + ++ G L + + ++ + + M A
Sbjct: 310 VSSVLRACGHLRDLSLA-----KYIYNYMLKAGFVLEST--VRNILIDVYAKCGDMITAR 362
Query: 98 NIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLA 157
++F+ ++ + +WN++I GY +S + + A++L+ M + + D TY L+ ++LA
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 158 DVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVIN 217
D++ G+ HS I++G + V N+L+ MYA G V D+ K+F M D V WN+VI+
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 218 GFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSD 277
G L + +M V PD T + CA L A LG+ H + + G
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 278 NVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEME 337
+ + NAL++ YSKCG + + RVF M +R+ V+W+ ++ + G G++ALE F +ME
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 338 IGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLV 397
G VP V F+ ++YACSH G+VDEG + F++MK Y I P IEH+ C+VDLL R+ +
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 398 KQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLY 457
+A E+IQ M + P+A IW ++L AC G AE +++L P G +L SN Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 458 AYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEIT 517
A ++W V +R+++ + + K PG+S +E+G V F GD S PQ+E I+ L +
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 518 KKLKLEGYVPRTENVFADI-EEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVC 576
+ EGY+P V ++ EEEEK + HSE++AIAF L+NT PGTP++V+KNLRVC
Sbjct: 783 SLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVC 842
Query: 577 ADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
DCH KLISK+ REI+VRD +RFH FKDG CSC+D W
Sbjct: 843 GDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 175/306 (57%), Gaps = 4/306 (1%)
Query: 53 ASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDP-NIFTW 111
+S+ ++L+++HA I G+ ++ GK LI P S + ++F V N++ W
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPAS-SLSVFRRVSPAKNVYLW 74
Query: 112 NTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIR 171
N++IR ++++ A+E Y K+ S + PD +T+P ++KA + L D MG+ + +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 172 NGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTL 231
GFES +FV N+LV MY+ G + A +VF+ M RDLV+WNS+I+G++S+G EAL +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 232 FREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSK 291
+ E+ + + PD +T+ S+ A L + G+ H + K G++ V VNN L+ Y K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 292 CGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGV 351
A+RVF EM R++VS++T++ G +E++ +F E + F P +T V
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSV 313
Query: 352 LYACSH 357
L AC H
Sbjct: 314 LRACGH 319
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
Query: 147 PFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMS- 205
PF+ +A+S +++ + H++ I G +S F L+ Y+ F + VF +S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 206 ERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRR 265
+++ WNS+I F+ NG EAL + ++ V PD YT S+ ACA L +G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 266 AHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGF 325
+ + +G ++ V NAL+D YS+ G++ A++VF EM R+ VSW++L+ G + +G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 326 GKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEG 364
+EALE++ E++ VP T VL A + +V +G
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 264 RRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAV 322
RR H V +GL + + L+D YS ++ VFR + +N W++++ +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 323 NGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIE 382
NG EALE + ++ P + TF V+ AC+ + G ++++ D G +
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD-MGFESDLF 142
Query: 383 HFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGH 428
+VD+ R GL+ +A + M + + V W +L+ + HG+
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLISGYSSHGY 187
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/629 (37%), Positives = 342/629 (54%), Gaps = 66/629 (10%)
Query: 46 ITLLQV---CAS-SKHKL-KQVHAFSIRHGVPLNNPDLGKYLI--YAIVSLSFPMSYAHN 98
ITL+ V CAS H L KQ+H F++ + + N +G L+ YA + M A+
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMFVGNCLVDMYAKCGM---MDEANT 285
Query: 99 IFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMH----------------------- 135
+FS++ ++ +WN M+ GY++ AV L+ KM
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 136 ------------VSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIR-------NGFES 176
SGIKP+ T +L + + + G++ H AI+ NG
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 177 LVFVQNSLVHMYAAFGHVKDACKVFELMS--ERDLVAWNSVINGFASNGKPNEALTLFRE 234
V N L+ MYA V A +F+ +S ERD+V W +I G++ +G N+AL L E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 235 MASEGVE--PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVN-----VNNALLD 287
M E + P+ +T+ ACA L AL +G++ H Y L + N V+N L+D
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY----ALRNQQNAVPLFVSNCLID 521
Query: 288 FYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVT 347
Y+KCG I A+ VF M +N V+W++L+ G ++G+G+EAL +F EM GF VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 348 FVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNM 407
+ VLYACSH GM+D+G YF RMK +G+ P EH+ C+VDLLGRAG + A I+ M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 408 LMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQ 467
M P V+W L C IHG + E A + +L H G Y LLSNLYA RW +V
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701
Query: 468 EVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVP 527
+R M + VKK PG S VE FF+GD++HP +EI+ +L + +++K GYVP
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVP 761
Query: 528 RTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLIS 587
T D+++EEK+D L HSEK+A+A+ ++ T G +R+ KNLRVC DCH A +S
Sbjct: 762 ETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMS 821
Query: 588 KVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
++ +I++RD SRFHHFK+G CSC+ YW
Sbjct: 822 RIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 186/380 (48%), Gaps = 51/380 (13%)
Query: 23 VKSLYHSTPASQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYL 82
+K ST A + P + KC T+ QV K +H + G+ N L +L
Sbjct: 18 IKVSLFSTSAPEITP--PFIHKCKTISQV--------KLIHQKLLSFGILTLN--LTSHL 65
Query: 83 IYAIVSLSFPMSYAHNIFSHV--QDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIK 140
I +S+ +S+A ++ D ++ WN++IR Y ++ + L+ MH
Sbjct: 66 ISTYISVGC-LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 141 PDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKV 200
PD +T+PF+ KA +++ VR GE H++++ GF S VFV N+LV MY+ + DA KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 201 FELMSERDLVAWNSVINGFASNGKPNEALTLFREMASE-GVEPDGYTMVSLFSACAELGA 259
F+ MS D+V+WNS+I +A GKP AL +F M +E G PD T+V++ CA LG
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 260 LALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVV- 318
+LG++ H + + N+ V N L+D Y+KCG++ A VF M ++ VSW+ +V
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 319 ----------------------------------GLAVNGFGKEALELFKEMEIGGFVPG 344
G A G G EAL + ++M G P
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 345 EVTFVGVLYACSHCGMVDEG 364
EVT + VL C+ G + G
Sbjct: 365 EVTLISVLSGCASVGALMHG 384
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 184 LVHMYAAFGHVKDACKVFELM--SERDLVAWNSVINGFASNGKPNEALTLFREMASEGVE 241
L+ Y + G + A + S+ + WNS+I + NG N+ L LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 242 PDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRV 301
PD YT +F AC E+ ++ G AH G NV V NAL+ YS+C + A++V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 302 FREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIG-GFVPGEVTFVGVLYACSHCGM 360
F EM + VSW++++ A G K ALE+F M G P +T V VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 361 VDEG-----FSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVI 415
G F+ M + C+VD+ + G++ +A NM + + V
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVG------NCLVDMYAKCGMMDEANTVFSNMSV-KDVVS 297
Query: 416 WRTLLGACTIHGHSAIAEIARSTLL---QLEPKHSGDYVLLS-NLYAYEQRWLNVQE--V 469
W + + G+S I + L E K D V S + Y QR L + V
Sbjct: 298 WNAM-----VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 470 RRTMVKERVK 479
R M+ +K
Sbjct: 353 CRQMLSSGIK 362
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/581 (38%), Positives = 343/581 (59%), Gaps = 18/581 (3%)
Query: 47 TLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDP 106
T++Q C S ++KQ+ + + G ++ + L +S +S+A IF ++ P
Sbjct: 8 TMIQKCVSFS-QIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKP 66
Query: 107 NIFTWNTMIRGYAESANPLLAVELYSKM------HVSGIKPDTHTYPFLLKAISKLADVR 160
WN +IRG+A S++P LA Y M + + D T F LKA ++
Sbjct: 67 LTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSS 126
Query: 161 MGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFA 220
+Q H R G + + +L+ Y+ G + A K+F+ M RD+ +WN++I G
Sbjct: 127 AMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLV 186
Query: 221 SNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRA-HTYVWKVGLSDNV 279
S + +EA+ L++ M +EG+ T+V+ AC+ LG + G H Y +DNV
Sbjct: 187 SGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNV 241
Query: 280 NVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLVVGLAVNGFGKEALELFKEMEI 338
V+NA +D YSKCG + A +VF + K++ V+W+T++ G AV+G ALE+F ++E
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 339 GGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVK 398
G P +V+++ L AC H G+V+ G S F M + G+ ++H+GC+VDLL RAG ++
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLR 360
Query: 399 QAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYA 458
+A++ I +M M P+ V+W++LLGA I+ +AEIA + ++ + GD+VLLSN+YA
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYA 420
Query: 459 YEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAEITK 518
+ RW +V VR M ++VKK PG S +E + EF+ D+SH Q EI+ + EI
Sbjct: 421 AQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRF 480
Query: 519 KLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAF---MLVNTAPGTPVRVVKNLRV 575
K++ +GYV +T V DI EEEKE+AL YHSEK+A+A+ M+ +PVRV+ NLR+
Sbjct: 481 KIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRI 540
Query: 576 CADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
C DCH+ K ISK+Y REI+VRDR RFH FKDG CSCRD+W
Sbjct: 541 CGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/616 (37%), Positives = 337/616 (54%), Gaps = 47/616 (7%)
Query: 38 ITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMS-YA 96
+ S + CI L Q+ KQ+H +R G+ + L K LI + L PM YA
Sbjct: 52 LISKLDDCINLNQI--------KQIHGHVLRKGLDQSCYILTK-LIRTLTKLGVPMDPYA 102
Query: 97 HNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKL 156
+ VQ N F W +IRGYA A+ +Y M I P + T+ LLKA +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 157 ADVRMGEQTHSVAIR-NGFESLVFVQNSLVHMY--------------------------- 188
D+ +G Q H+ R GF V+V N+++ MY
Sbjct: 163 KDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 189 ----AAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDG 244
A G+++ A ++FE + +D+VAW +++ GFA N KP EAL F M G+ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 245 YTMVSLFSACAELGALALGRRAHTYVWKVGLS--DNVNVNNALLDFYSKCGIIIAAQRVF 302
T+ SACA+LGA RA K G S D+V + +AL+D YSKCG + A VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 303 REMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFV-PGEVTFVGVLYACSHCGMV 361
M +N ++S++++GLA +G +EAL LF M + P VTFVG L ACSH G+V
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 362 DEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLG 421
D+G F M +G+ P +H+ CMVDLLGR G +++A E I+ M + P+ +W LLG
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 422 ACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKT 481
AC IH + IAEIA L +LEP G+Y+LLSN+YA W V VR+ + ++ +KKT
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 482 PGHS-LVELGNRVFEFFMGDRSHPQTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEE 540
P S +V+ ++ +FF G+ +HP + +I L E+ ++L + GY P +V D+ +
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 541 KEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRS 600
K L H+EK+A+AF L+ T + + ++KNLR+C DCH ++L S+V + I++RD
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 601 RFHHFKDGHCSCRDYW 616
RFHHF+ G CSC D+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 312/521 (59%), Gaps = 5/521 (0%)
Query: 99 IFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPF--LLKAISKL 156
+F + + + ++N +I Y+++ ++ + +M G D +PF +L + L
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF--DRRNFPFATMLSIAANL 364
Query: 157 ADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVI 216
+ ++MG Q H A+ +S++ V NSLV MYA ++A +F+ + +R V+W ++I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 217 NGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLS 276
+G+ G L LF +M + D T ++ A A +L LG++ H ++ + G
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 277 DNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEM 336
+NV + L+D Y+KCG I A +VF EM RNAVSW+ L+ A NG G+ A+ F +M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 337 EIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGL 396
G P V+ +GVL ACSHCG V++G YF+ M YGI PK +H+ CM+DLLGR G
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 397 VKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEP-KHSGDYVLLSN 455
+A + + M P+ ++W ++L AC IH + ++AE A L +E + + YV +SN
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSN 664
Query: 456 LYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHPQTEEIHAMLAE 515
+YA W V++V++ M + +KK P +S VE+ +++ F D++HP +EI + E
Sbjct: 665 IYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINE 724
Query: 516 ITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLRV 575
+T +++ EGY P T +V D++E+ K ++L YHSE++A+AF L++T G P+ V+KNLR
Sbjct: 725 LTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRA 784
Query: 576 CADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
C DCH AIKLISK+ REI VRD SRFHHF +G CSC DYW
Sbjct: 785 CRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 190/407 (46%), Gaps = 16/407 (3%)
Query: 47 TLLQVC--ASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSF-----PMSYAHNI 99
TLL C A ++ + QVHAF+++ G D +L + V L + A +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGF-----DTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 100 FSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADV 159
F + + + T+NT+I GY + ++ L+ KM SG +P T+ +LKA+ L D
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 160 RMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGF 219
+G+Q H++++ GF V N ++ Y+ V + +F+ M E D V++N VI+ +
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 220 ASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNV 279
+ + +L FREM G + + ++ S A L +L +GR+ H +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 280 NVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIG 339
+V N+L+D Y+KC + A+ +F+ + +R VSW+ L+ G G L+LF +M
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 340 GFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAGLVKQ 399
+ TF VL A + + G G + + +VD+ + G +K
Sbjct: 447 NLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 400 AYEYIQNMLMPPNAVIWRTLLGACTIH--GHSAIAEIARSTLLQLEP 444
A + + M NAV W L+ A + G +AI A+ L+P
Sbjct: 506 AVQVFEEM-PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 8/335 (2%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKM--HVSGIKPDTHTYPFLL 150
+S A ++F + D + TW ++ YA +++ A +L+ +M S PD T+ LL
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 151 KAISKLADVRMGEQTHSVAIRNGFESLVF--VQNSLVHMYAAFGHVKDACKVFELMSERD 208
+ Q H+ A++ GF++ F V N L+ Y + AC +FE + E+D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 209 LVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHT 268
V +N++I G+ +G E++ LF +M G +P +T + A L ALG++ H
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 269 YVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKE 328
G S + +V N +LDFYSK ++ + +F EM + + VS++ ++ + +
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 329 ALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFG-CM 387
+L F+EM+ GF F +L ++ + G + I H G +
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSL 392
Query: 388 VDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
VD+ + + ++A E I L V W L+
Sbjct: 393 VDMYAKCEMFEEA-ELIFKSLPQRTTVSWTALISG 426
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Query: 182 NSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREM--ASEG 239
N+++ + G V A +F+ M +R +V W ++ +A N +EA LFR+M +S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 240 VEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDN--VNVNNALLDFYSKCGIIIA 297
PD T +L C + + H + K+G N + V+N LL Y + +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 298 AQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYA 354
A +F E+ ++++V+++TL+ G +G E++ LF +M G P + TF GVL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 278 NVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEM- 336
N N ++ + K G + +A+ +F M R V+W+ L+ A N EA +LF++M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 337 -EIGGFVPGEVTFVGVLYACS 356
+P VTF +L C+
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCN 158
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 337/592 (56%), Gaps = 40/592 (6%)
Query: 60 KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSF---PMSYAHNIFSHVQDPNIFTWNTMIR 116
++V+AF G+ +N+ ++ A+V + + A +F N+ N M
Sbjct: 256 EKVYAFIRNSGIEVND-----LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 117 GYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFES 176
Y A+ +++ M SG++PD + + + S+L ++ G+ H +RNGFES
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 177 LVFVQNSLVHMY-------AAF------------------------GHVKDACKVFELMS 205
+ N+L+ MY AF G V A + FE M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 206 ERDLVAWNSVINGFASNGKPNEALTLFREMAS-EGVEPDGYTMVSLFSACAELGALALGR 264
E+++V+WN++I+G EA+ +F M S EGV DG TM+S+ SAC LGAL L +
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 265 RAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNG 324
+ Y+ K G+ +V + L+D +S+CG +A +F + R+ +W+ + +A+ G
Sbjct: 491 WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAG 550
Query: 325 FGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHF 384
+ A+ELF +M G P V FVG L ACSH G+V +G F M +G+ P+ H+
Sbjct: 551 NAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY 610
Query: 385 GCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEP 444
GCMVDLLGRAGL+++A + I++M M PN VIW +LL AC + G+ +A A + L P
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAP 670
Query: 445 KHSGDYVLLSNLYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGDRSHP 504
+ +G YVLLSN+YA RW ++ +VR +M ++ ++K PG S +++ + EF GD SHP
Sbjct: 671 ERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHP 730
Query: 505 QTEEIHAMLAEITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPG 564
+ I AML E++++ G+VP NV D++E+EK LS HSEK+A+A+ L+++ G
Sbjct: 731 EMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG 790
Query: 565 TPVRVVKNLRVCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
T +R+VKNLRVC+DCH K SKVY+REI++RD +RFH+ + G CSC D+W
Sbjct: 791 TTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 13/336 (3%)
Query: 25 SLYHSTPASQENPITSVVRKCITLLQVCASSKHKLKQVHAFSIRHGVPLNNPDLGKYLIY 84
SL + + ++ P S ++ C T+ +LK H + G+ + + K +
Sbjct: 24 SLLNQSKCTKATP--SSLKNCKTI--------DELKMFHRSLTKQGLDNDVSTITKLVAR 73
Query: 85 AI-VSLSFPMSYAHNIFSHVQD-PNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPD 142
+ + +S+A +F + + F +N++IRGYA S A+ L+ +M SGI PD
Sbjct: 74 SCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133
Query: 143 THTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFE 202
+T+PF L A +K G Q H + ++ G+ +FVQNSLVH YA G + A KVF+
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFD 193
Query: 203 LMSERDLVAWNSVINGFASNGKPNEALTL-FREMASEGVEPDGYTMVSLFSACAELGALA 261
MSER++V+W S+I G+A +A+ L FR + E V P+ TMV + SACA+L L
Sbjct: 194 EMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 262 LGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLA 321
G + + ++ G+ N + +AL+D Y KC I A+R+F E N + +
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 322 VNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSH 357
G +EAL +F M G P ++ + + +CS
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 47/407 (11%)
Query: 49 LQVCASSKHKLK--QVHAFSIRHGVPLNNPDLGKYLIYAIVSL---SFPMSYAHNIFSHV 103
L CA S+ K Q+H ++ G DL ++ ++V + A +F +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYA---KDL--FVQNSLVHFYAECGELDSARKVFDEM 195
Query: 104 QDPNIFTWNTMIRGYAESANPLLAVELYSKM-HVSGIKPDTHTYPFLLKAISKLADVRMG 162
+ N+ +W +MI GYA AV+L+ +M + P++ T ++ A +KL D+ G
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG 255
Query: 163 EQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASN 222
E+ ++ +G E + ++LV MY + A ++F+ +L N++ + +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 223 GKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVN 282
G EAL +F M GV PD +M+S S+C++L + G+ H YV + G N+
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 283 NALLDFYSKC-------------------------------GIIIAAQRVFREMRKRNAV 311
NAL+D Y KC G + AA F M ++N V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 312 SWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGE-VTFVGVLYACSHCGMVD-EGFSYFK 369
SW+T++ GL +EA+E+F M+ V + VT + + AC H G +D + Y+
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 370 RMKDEYGIMPKIEHFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIW 416
K+ GI + +VD+ R G + A I N L + W
Sbjct: 496 IEKN--GIQLDVRLGTTLVDMFSRCGDPESAMS-IFNSLTNRDVSAW 539
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 307/522 (58%), Gaps = 9/522 (1%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A IF +++ N+ TW TMI GY ++ +A +L+ M + ++ +L +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTL 246
Query: 156 LADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSV 215
+ E+ V V N+++ + G + A +VF+LM +RD W +
Sbjct: 247 SGRIEDAEEFFEVMPMKP----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 216 INGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGL 275
I + G EAL LF +M +GV P +++S+ S CA L +L GR+ H ++ +
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 276 SDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKE 335
D+V V + L+ Y KCG ++ A+ VF ++ + W++++ G A +G G+EAL++F E
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 336 MEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMVDLLGRAG 395
M G +P +VT + +L ACS+ G ++EG F+ M+ ++ + P +EH+ C VD+LGRAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 396 LVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGHSAIAEIARSTLLQLEPKHSGDYVLLSN 455
V +A E I++M + P+A +W LLGAC H +AE+A L + EP ++G YVLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 456 LYAYEQRWLNVQEVRRTMVKERVKKTPGHSLVELGNRVFEFFMGD-RSHPQTEEIHAMLA 514
+ A +W +V VR+ M V K PG S +E+G +V F G ++HP+ I ML
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLE 602
Query: 515 EITKKLKLEGYVPRTENVFADIEEEEKEDALSYHSEKIAIAFMLVNTAPGTPVRVVKNLR 574
+ L+ GY P +V D++EEEK D+LS HSE++A+A+ L+ G P+RV+KNLR
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 575 VCADCHLAIKLISKVYSREIVVRDRSRFHHFKDGHCSCRDYW 616
VC DCH AIKLISKV REI++RD +RFHHF +G CSCRDYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 2/227 (0%)
Query: 93 MSYAHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKA 152
+S A +F ++D + TW MI+ Y L A++L+++M G++P + +L
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 153 ISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAW 212
+ LA ++ G Q H+ +R F+ V+V + L+ MY G + A VF+ S +D++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 213 NSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGRRA-HTYVW 271
NS+I+G+AS+G EAL +F EM S G P+ T++++ +AC+ G L G +
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 272 KVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMR-KRNAVSWSTLV 317
K ++ V + +D + G + A + M K +A W L+
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 70/353 (19%)
Query: 81 YLIYAIVSLSFPMSY---------AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELY 131
YL V+ SF +S A F +Q I +WN+++ GY + P A +L+
Sbjct: 12 YLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF 71
Query: 132 SKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGFESLVFVQNSLVHMYAAF 191
+M E V N LV Y
Sbjct: 72 DEMS---------------------------------------ERNVVSWNGLVSGYIKN 92
Query: 192 GHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLF 251
+ +A VFELM ER++V+W +++ G+ G EA +LF M E + + +F
Sbjct: 93 RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMF 148
Query: 252 SACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAV 311
+ G + R+ + + + D V N ++ + G + A+ +F EMR+RN V
Sbjct: 149 GGLIDDGRIDKARKLYDM---MPVKDVVASTN-MIGGLCREGRVDEARLIFDEMRERNVV 204
Query: 312 SWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKRM 371
+W+T++ G N A +LF+ M EV++ +L + G +++ +F+
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFE-- 258
Query: 372 KDEYGIMPKIEHFGC--MVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGA 422
+MP C M+ G G + +A M NA WR ++ A
Sbjct: 259 -----VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-WRGMIKA 305
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 96 AHNIFSHVQDPNIFTWNTMIRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISK 155
A N+F + + N+ +W M++GY + A L+ +M P+ + + +
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGL 151
Query: 156 LADVRMGEQTHSVAIRNGFESL----VFVQNSLVHMYAAFGHVKDACKVFELMSERDLVA 211
+ D R+ + R ++ + V +++ G V +A +F+ M ER++V
Sbjct: 152 IDDGRIDKA------RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVT 205
Query: 212 WNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSLFSACAELGALALGR-RAHTYV 270
W ++I G+ N + + A LF E+ E E +M+ LG GR
Sbjct: 206 WTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSML--------LGYTLSGRIEDAEEF 256
Query: 271 WKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEAL 330
++V V NA++ + + G I A+RVF M R+ +W ++ GF EAL
Sbjct: 257 FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEAL 316
Query: 331 ELFKEMEIGGFVPGEVTFVGVLYACS 356
+LF +M+ G P + + +L C+
Sbjct: 317 DLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 57/259 (22%)
Query: 191 FGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTLFREMASEGVEPDGYTMVSL 250
G + +A K F+ + + + +WNS+++G+ SNG P EA LF EM+
Sbjct: 30 IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER------------ 77
Query: 251 FSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCGIIIAAQRVFREMRKRNA 310
NV N L+ Y K +I+ A+ VF M +RN
Sbjct: 78 ---------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPERNV 110
Query: 311 VSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLYACSHCGMVDEGFSYFKR 370
VSW+ +V G G EA LF M V V F G++D+G +
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDDG--RIDK 159
Query: 371 MKDEYGIMPKIEHFGC--MVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRTLLGACTIHGH 428
+ Y +MP + M+ L R G V +A I + + N V W T++ T +
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEA-RLIFDEMRERNVVTWTTMI---TGYRQ 215
Query: 429 SAIAEIARSTLLQLEPKHS 447
+ ++AR L ++ P+ +
Sbjct: 216 NNRVDVARK-LFEVMPEKT 233
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 35/167 (20%)
Query: 290 SKCGIIIAAQRVFREMRKRNAVSWSTLVVGLAVNGFGKEALELFKEME----------IG 339
S+ G I A++ F ++ + SW+++V G NG KEA +LF EM +
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 340 GFVPGE-----------------VTFVGVLYACSHCGMVDEGFSYFKRMKDEYGIMPKIE 382
G++ V++ ++ GMV E S F RM + + +
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV- 146
Query: 383 HFGCMVDLLGRAGLVKQAYEYIQNMLMPPNAVIWRT-LLGACTIHGH 428
FG ++D GR ++ Y+ +MP V+ T ++G G
Sbjct: 147 MFGGLID-DGRIDKARKLYD-----MMPVKDVVASTNMIGGLCREGR 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,073,303
Number of Sequences: 539616
Number of extensions: 9446688
Number of successful extensions: 28061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 21238
Number of HSP's gapped (non-prelim): 2116
length of query: 616
length of database: 191,569,459
effective HSP length: 124
effective length of query: 492
effective length of database: 124,657,075
effective search space: 61331280900
effective search space used: 61331280900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)