Query 007140
Match_columns 616
No_of_seqs 203 out of 2152
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 18:11:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 1.1E-36 3.8E-41 344.1 41.7 474 6-609 37-591 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 1.2E-33 4.2E-38 319.6 44.3 461 5-609 64-609 (741)
3 3azo_A Aminopeptidase; POP fam 100.0 4E-33 1.4E-37 311.3 44.3 445 32-609 25-510 (662)
4 2z3z_A Dipeptidyl aminopeptida 100.0 2E-32 6.7E-37 308.1 45.4 437 32-608 83-575 (706)
5 1z68_A Fibroblast activation p 100.0 4E-33 1.4E-37 314.4 38.7 472 6-609 37-585 (719)
6 1xfd_A DIP, dipeptidyl aminope 100.0 3.2E-33 1.1E-37 315.3 37.7 479 6-609 38-585 (723)
7 2bkl_A Prolyl endopeptidase; m 100.0 8.3E-32 2.9E-36 302.0 44.6 447 36-609 73-532 (695)
8 3o4h_A Acylamino-acid-releasin 100.0 1E-32 3.5E-37 303.3 36.3 400 33-608 24-443 (582)
9 2xdw_A Prolyl endopeptidase; a 100.0 1.8E-31 6.2E-36 300.1 43.3 452 33-609 76-553 (710)
10 3iuj_A Prolyl endopeptidase; h 100.0 1.3E-30 4.5E-35 291.7 43.3 397 33-609 131-540 (693)
11 1yr2_A Prolyl oligopeptidase; 100.0 8.8E-30 3E-34 287.5 42.1 445 37-609 113-574 (741)
12 2xe4_A Oligopeptidase B; hydro 100.0 1.2E-29 4.1E-34 285.6 42.6 391 33-609 176-596 (751)
13 4hvt_A Ritya.17583.B, post-pro 99.9 6.6E-21 2.2E-25 209.8 40.1 159 434-609 403-565 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 6.1E-20 2.1E-24 190.3 30.3 343 18-462 20-385 (388)
15 4a5s_A Dipeptidyl peptidase 4 99.8 3.9E-18 1.3E-22 192.4 31.7 333 33-469 19-409 (740)
16 2ecf_A Dipeptidyl peptidase IV 99.8 2.3E-17 7.8E-22 186.2 34.5 330 32-469 38-423 (741)
17 1k32_A Tricorn protease; prote 99.8 2.3E-17 7.8E-22 193.2 34.7 376 5-470 33-470 (1045)
18 3c5m_A Oligogalacturonate lyas 99.8 5.8E-18 2E-22 175.6 26.5 324 33-467 38-390 (396)
19 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.6E-17 9E-22 172.3 29.2 246 5-363 159-408 (415)
20 3pe7_A Oligogalacturonate lyas 99.8 1E-16 3.4E-21 166.0 29.5 309 61-472 10-340 (388)
21 1xfd_A DIP, dipeptidyl aminope 99.8 2.6E-16 9.1E-21 176.9 29.7 334 32-468 18-403 (723)
22 2ojh_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 149.3 30.6 261 5-373 22-292 (297)
23 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.2E-15 4E-20 159.7 30.5 230 41-373 142-374 (415)
24 2gop_A Trilobed protease; beta 99.7 1.4E-15 4.6E-20 154.9 28.7 311 28-474 12-343 (347)
25 1z68_A Fibroblast activation p 99.7 4.5E-16 1.6E-20 175.0 26.3 329 33-468 18-402 (719)
26 2z3z_A Dipeptidyl aminopeptida 99.7 8.7E-15 3E-19 164.1 32.7 295 5-373 101-421 (706)
27 3c5m_A Oligogalacturonate lyas 99.7 1.2E-15 4E-20 158.1 22.4 285 5-372 60-370 (396)
28 3azo_A Aminopeptidase; POP fam 99.7 2.3E-14 7.7E-19 159.5 28.4 284 18-412 57-377 (662)
29 1k32_A Tricorn protease; prote 99.6 3.1E-13 1.1E-17 158.2 32.5 278 19-446 194-491 (1045)
30 2ojh_A Uncharacterized protein 99.6 9.6E-13 3.3E-17 129.6 31.2 270 59-448 19-293 (297)
31 2gop_A Trilobed protease; beta 99.6 3.2E-13 1.1E-17 137.3 27.0 244 4-330 42-290 (347)
32 2xdw_A Prolyl endopeptidase; a 99.6 7.1E-13 2.4E-17 148.6 31.7 278 6-374 99-401 (710)
33 2bkl_A Prolyl endopeptidase; m 99.5 2.1E-12 7.2E-17 144.4 30.3 274 5-374 94-384 (695)
34 3vgz_A Uncharacterized protein 99.5 3.3E-11 1.1E-15 122.3 35.5 276 32-447 42-334 (353)
35 1l0q_A Surface layer protein; 99.5 8.4E-11 2.9E-15 121.3 38.3 249 6-372 13-263 (391)
36 3o4h_A Acylamino-acid-releasin 99.5 3E-13 1E-17 148.0 20.0 211 18-329 53-274 (582)
37 3hfq_A Uncharacterized protein 99.5 4.2E-12 1.4E-16 129.0 25.2 87 6-104 17-103 (347)
38 1yr2_A Prolyl oligopeptidase; 99.5 6.5E-12 2.2E-16 141.5 28.4 277 5-373 133-427 (741)
39 3scy_A Hypothetical bacterial 99.5 2.5E-11 8.5E-16 124.0 28.7 88 6-104 28-115 (361)
40 3s25_A Hypothetical 7-bladed b 99.5 1.9E-11 6.6E-16 120.8 26.2 283 33-468 16-300 (302)
41 3u4y_A Uncharacterized protein 99.4 1.9E-10 6.3E-15 115.8 31.7 257 6-372 21-292 (331)
42 3u4y_A Uncharacterized protein 99.4 3.7E-10 1.3E-14 113.5 31.1 294 35-463 2-306 (331)
43 1l0q_A Surface layer protein; 99.4 6.1E-10 2.1E-14 114.8 33.3 267 60-466 10-280 (391)
44 3s25_A Hypothetical 7-bladed b 99.4 4E-10 1.4E-14 111.3 27.4 239 6-372 38-281 (302)
45 3vgz_A Uncharacterized protein 99.4 6.4E-10 2.2E-14 112.7 29.5 253 7-372 71-333 (353)
46 1ri6_A Putative isomerase YBHE 99.3 8.5E-10 2.9E-14 111.1 29.8 260 7-371 17-295 (343)
47 1pby_B Quinohemoprotein amine 99.3 9.5E-10 3.3E-14 110.4 30.0 265 6-370 12-297 (337)
48 3bws_A Protein LP49; two-domai 99.3 4E-09 1.4E-13 110.2 33.3 248 19-372 111-364 (433)
49 3hfq_A Uncharacterized protein 99.3 3.3E-09 1.1E-13 107.5 29.2 299 59-469 15-327 (347)
50 1pby_B Quinohemoprotein amine 99.3 6.5E-09 2.2E-13 104.2 30.4 276 61-465 10-314 (337)
51 1gxr_A ESG1, transducin-like e 99.2 1.9E-08 6.3E-13 100.8 30.9 222 32-371 99-325 (337)
52 3zwl_B Eukaryotic translation 99.2 3.3E-08 1.1E-12 100.3 32.2 307 32-462 34-347 (369)
53 1gxr_A ESG1, transducin-like e 99.2 5E-08 1.7E-12 97.6 32.8 223 32-371 53-284 (337)
54 3bws_A Protein LP49; two-domai 99.2 5.5E-08 1.9E-12 101.5 33.3 294 38-467 71-396 (433)
55 4g56_B MGC81050 protein; prote 99.1 1.3E-08 4.3E-13 103.8 26.5 232 32-372 44-289 (357)
56 2ymu_A WD-40 repeat protein; u 99.1 5.4E-08 1.8E-12 105.7 31.5 219 32-371 305-527 (577)
57 3scy_A Hypothetical bacterial 99.1 1.1E-07 3.9E-12 96.6 31.2 311 43-467 13-345 (361)
58 2ymu_A WD-40 repeat protein; u 99.1 2.4E-07 8.3E-12 100.5 35.5 219 32-371 264-486 (577)
59 3ow8_A WD repeat-containing pr 99.1 1.5E-07 5.2E-12 94.2 30.2 223 32-371 82-309 (321)
60 1nr0_A Actin interacting prote 99.1 1.3E-07 4.3E-12 103.8 31.5 230 32-371 20-258 (611)
61 3iuj_A Prolyl endopeptidase; h 99.1 1.4E-08 4.6E-13 113.3 23.7 245 5-342 155-412 (693)
62 2xe4_A Oligopeptidase B; hydro 99.1 2E-08 6.9E-13 112.8 24.9 270 32-468 118-415 (751)
63 4h5i_A Guanine nucleotide-exch 99.0 8.8E-09 3E-13 105.3 19.8 200 33-330 136-342 (365)
64 1nir_A Nitrite reductase; hemo 99.0 6.9E-07 2.4E-11 96.2 35.0 303 33-466 181-519 (543)
65 4aez_A CDC20, WD repeat-contai 99.0 3.7E-07 1.3E-11 94.3 31.5 248 6-371 114-368 (401)
66 1ri6_A Putative isomerase YBHE 99.0 6.6E-08 2.3E-12 97.1 25.2 231 6-333 61-310 (343)
67 2vdu_B TRNA (guanine-N(7)-)-me 99.0 4E-07 1.4E-11 95.8 31.6 116 175-334 150-272 (450)
68 3ei3_B DNA damage-binding prot 99.0 1.1E-06 3.8E-11 89.9 33.9 232 32-371 75-318 (383)
69 1jof_A Carboxy-CIS,CIS-muconat 99.0 7.6E-08 2.6E-12 98.3 24.6 83 6-104 15-101 (365)
70 4gqb_B Methylosome protein 50; 99.0 2.3E-07 7.8E-12 93.9 27.9 197 174-460 127-330 (344)
71 1r5m_A SIR4-interacting protei 99.0 1.1E-06 3.9E-11 90.7 33.3 292 32-463 47-363 (425)
72 1jmx_B Amine dehydrogenase; ox 99.0 1E-07 3.5E-12 96.0 24.6 123 35-219 4-135 (349)
73 4ery_A WD repeat-containing pr 99.0 3.8E-06 1.3E-10 83.2 35.1 193 32-333 25-223 (312)
74 3zwl_B Eukaryotic translation 99.0 3.6E-07 1.2E-11 92.5 27.9 251 7-371 56-334 (369)
75 3ow8_A WD repeat-containing pr 98.9 1.8E-06 6.2E-11 86.3 31.9 160 158-371 103-267 (321)
76 1nir_A Nitrite reductase; hemo 98.9 1.3E-06 4.4E-11 94.1 32.4 254 28-372 219-498 (543)
77 3mkq_A Coatomer beta'-subunit; 98.9 3.5E-07 1.2E-11 103.7 29.3 232 21-371 6-247 (814)
78 3nuz_A Putative acetyl xylan e 98.9 4.2E-09 1.4E-13 109.0 11.7 121 480-609 90-237 (398)
79 2pm9_A Protein WEB1, protein t 98.9 2.1E-07 7E-12 96.3 23.5 299 32-463 14-339 (416)
80 1jmx_B Amine dehydrogenase; ox 98.9 3.6E-07 1.2E-11 92.0 23.9 86 6-104 22-109 (349)
81 1r5m_A SIR4-interacting protei 98.9 1.6E-06 5.5E-11 89.6 29.4 220 32-371 110-349 (425)
82 3dw8_B Serine/threonine-protei 98.9 2.7E-06 9.1E-11 88.9 31.1 120 175-333 178-315 (447)
83 4gqb_B Methylosome protein 50; 98.9 2.3E-07 8E-12 93.8 22.1 228 32-372 84-319 (344)
84 3vl1_A 26S proteasome regulato 98.9 5.4E-07 1.8E-11 93.4 25.3 221 33-370 59-309 (420)
85 3fm0_A Protein CIAO1; WDR39,SG 98.9 2.5E-06 8.5E-11 86.2 29.5 197 32-331 18-225 (345)
86 3iii_A COCE/NOND family hydrol 98.9 9.2E-09 3.1E-13 110.2 11.9 118 481-609 40-168 (560)
87 4h5i_A Guanine nucleotide-exch 98.9 5.8E-06 2E-10 84.2 32.4 205 176-461 135-343 (365)
88 2b9v_A Alpha-amino acid ester 98.8 5.1E-09 1.7E-13 115.0 9.4 114 481-609 36-164 (652)
89 4ao6_A Esterase; hydrolase, th 98.8 8.4E-09 2.9E-13 100.0 9.9 124 461-608 10-154 (259)
90 2j04_A TAU60, YPL007P, hypothe 98.8 3.4E-07 1.1E-11 96.6 21.8 139 177-370 132-285 (588)
91 3sjl_D Methylamine dehydrogena 98.8 4.8E-06 1.7E-10 84.3 29.6 305 36-465 38-367 (386)
92 3vl1_A 26S proteasome regulato 98.8 4.7E-06 1.6E-10 86.2 30.3 205 33-334 100-323 (420)
93 2ynn_A Coatomer subunit beta'; 98.8 6.7E-06 2.3E-10 81.3 30.0 224 32-371 15-247 (304)
94 1nr0_A Actin interacting prote 98.8 2.7E-06 9.1E-11 93.3 29.5 216 6-333 40-270 (611)
95 1erj_A Transcriptional repress 98.8 5.8E-06 2E-10 85.1 30.4 196 32-333 66-287 (393)
96 1vlq_A Acetyl xylan esterase; 98.8 5.6E-10 1.9E-14 112.8 -0.3 109 480-609 66-199 (337)
97 1got_B GT-beta; complex (GTP-b 98.8 3.3E-06 1.1E-10 85.0 27.6 263 32-371 57-331 (340)
98 1pgu_A Actin interacting prote 98.8 5.2E-06 1.8E-10 90.5 31.1 225 32-371 20-271 (615)
99 3sfz_A APAF-1, apoptotic pepti 98.8 4.1E-06 1.4E-10 99.8 32.6 315 32-464 842-1161(1249)
100 1k8k_C P40, ARP2/3 complex 41 98.8 1.1E-06 3.7E-11 89.3 23.9 225 32-370 10-262 (372)
101 3dwl_C Actin-related protein 2 98.8 7.7E-08 2.6E-12 98.3 15.3 230 32-370 13-269 (377)
102 2pbi_B Guanine nucleotide-bind 98.8 1.3E-05 4.3E-10 81.3 31.7 225 32-371 66-303 (354)
103 2pm9_A Protein WEB1, protein t 98.8 1.7E-06 5.7E-11 89.4 25.3 231 32-369 69-323 (416)
104 1mpx_A Alpha-amino acid ester 98.8 8E-09 2.8E-13 112.9 7.8 115 480-609 23-151 (615)
105 2mad_H Methylamine dehydrogena 98.8 2.5E-05 8.5E-10 79.7 33.1 123 37-222 27-160 (373)
106 1vyh_C Platelet-activating fac 98.8 9.5E-06 3.2E-10 84.0 30.6 223 32-371 110-357 (410)
107 3g8y_A SUSD/RAGB-associated es 98.7 2.6E-08 8.9E-13 102.8 10.7 121 480-609 85-232 (391)
108 2xzm_R RACK1; ribosome, transl 98.7 2.6E-05 8.9E-10 78.5 32.8 162 158-370 99-273 (343)
109 4e54_B DNA damage-binding prot 98.7 2.8E-06 9.5E-11 88.8 26.4 231 32-371 121-363 (435)
110 4g56_B MGC81050 protein; prote 98.7 5.1E-07 1.7E-11 91.8 20.1 226 32-370 96-330 (357)
111 1yfq_A Cell cycle arrest prote 98.7 4.1E-06 1.4E-10 83.8 26.5 192 32-332 13-226 (342)
112 3mkq_A Coatomer beta'-subunit; 98.7 5E-06 1.7E-10 94.2 29.7 223 32-370 57-288 (814)
113 4aez_A CDC20, WD repeat-contai 98.7 1.1E-05 3.7E-10 83.2 29.3 261 62-463 113-382 (401)
114 3i2n_A WD repeat-containing pr 98.7 5.3E-06 1.8E-10 83.5 26.3 234 32-372 20-279 (357)
115 3iz6_a 40S ribosomal protein R 98.7 2.9E-05 1E-09 79.4 31.9 59 32-104 68-126 (380)
116 2aq5_A Coronin-1A; WD40 repeat 98.7 2.5E-06 8.5E-11 88.0 23.4 227 32-368 83-329 (402)
117 3dm0_A Maltose-binding peripla 98.7 2.3E-05 7.9E-10 87.2 32.8 228 32-371 384-621 (694)
118 3sfz_A APAF-1, apoptotic pepti 98.7 1E-05 3.4E-10 96.4 31.5 224 32-371 617-859 (1249)
119 3frx_A Guanine nucleotide-bind 98.7 3.8E-05 1.3E-09 76.4 31.1 225 32-371 19-256 (319)
120 2mad_H Methylamine dehydrogena 98.7 4.8E-05 1.6E-09 77.5 32.2 91 7-104 49-142 (373)
121 4aow_A Guanine nucleotide-bind 98.7 7E-05 2.4E-09 74.6 33.1 197 32-333 40-246 (340)
122 3frx_A Guanine nucleotide-bind 98.7 1.5E-05 5E-10 79.5 27.8 226 32-371 67-305 (319)
123 1sq9_A Antiviral protein SKI8; 98.7 2.3E-05 7.9E-10 80.2 29.9 229 32-371 18-310 (397)
124 1erj_A Transcriptional repress 98.7 8.7E-06 3E-10 83.8 26.4 200 33-334 126-342 (393)
125 1vyh_C Platelet-activating fac 98.6 1.6E-05 5.5E-10 82.3 28.1 223 32-371 152-399 (410)
126 2xzm_R RACK1; ribosome, transl 98.6 2.3E-05 7.9E-10 78.8 28.4 229 32-371 78-328 (343)
127 3e5z_A Putative gluconolactona 98.6 2.3E-05 7.8E-10 77.0 27.3 240 18-371 17-275 (296)
128 2aq5_A Coronin-1A; WD40 repeat 98.6 2E-05 6.7E-10 81.2 27.5 149 175-371 132-286 (402)
129 3g4e_A Regucalcin; six bladed 98.6 1E-05 3.5E-10 79.7 24.1 230 33-372 15-261 (297)
130 2vdu_B TRNA (guanine-N(7)-)-me 98.6 1.2E-05 4.2E-10 84.2 25.8 115 32-219 104-230 (450)
131 2ghs_A AGR_C_1268P; regucalcin 98.6 1.1E-05 3.6E-10 80.8 24.1 224 33-372 51-291 (326)
132 3fm0_A Protein CIAO1; WDR39,SG 98.6 1.1E-05 3.8E-10 81.4 23.9 140 32-255 63-208 (345)
133 1sq9_A Antiviral protein SKI8; 98.6 7.6E-06 2.6E-10 83.8 23.0 120 176-333 188-322 (397)
134 3dm0_A Maltose-binding peripla 98.6 3E-05 1E-09 86.2 29.1 191 32-333 432-632 (694)
135 3c75_H MADH, methylamine dehyd 98.5 0.00011 3.7E-09 75.8 30.7 296 39-465 81-406 (426)
136 3dw8_B Serine/threonine-protei 98.5 2.9E-05 1E-09 80.8 27.2 124 176-334 228-374 (447)
137 2hdw_A Hypothetical protein PA 98.5 2.3E-07 7.7E-12 94.5 10.7 111 480-608 66-177 (367)
138 3dwl_C Actin-related protein 2 98.5 1.7E-06 5.8E-11 88.2 17.1 182 32-317 57-270 (377)
139 3doh_A Esterase; alpha-beta hy 98.5 2.4E-07 8.2E-12 95.2 10.7 117 481-609 143-270 (380)
140 1qks_A Cytochrome CD1 nitrite 98.5 0.00012 4.3E-09 78.6 32.3 256 27-372 236-522 (567)
141 4gga_A P55CDC, cell division c 98.5 3.8E-05 1.3E-09 79.6 27.4 251 6-371 126-383 (420)
142 1qks_A Cytochrome CD1 nitrite 98.5 0.0004 1.4E-08 74.6 35.5 307 28-465 194-542 (567)
143 4ery_A WD repeat-containing pr 98.5 6.7E-05 2.3E-09 74.1 27.5 196 32-330 109-311 (312)
144 1jof_A Carboxy-CIS,CIS-muconat 98.5 9.3E-06 3.2E-10 82.6 21.6 92 7-104 62-162 (365)
145 4a11_B DNA excision repair pro 98.5 0.00024 8.1E-09 72.6 32.0 199 32-334 45-277 (408)
146 3ei3_B DNA damage-binding prot 98.5 5.3E-05 1.8E-09 77.3 26.7 205 32-332 165-381 (383)
147 3jrp_A Fusion protein of prote 98.5 3.2E-05 1.1E-09 78.3 25.0 225 32-371 13-275 (379)
148 3g4e_A Regucalcin; six bladed 98.5 0.00016 5.5E-09 71.0 28.8 144 157-332 35-179 (297)
149 2j04_A TAU60, YPL007P, hypothe 98.5 6.2E-06 2.1E-10 87.1 19.2 190 30-330 85-296 (588)
150 2jbw_A Dhpon-hydrolase, 2,6-di 98.5 3.2E-07 1.1E-11 94.5 9.2 143 441-609 85-230 (386)
151 2dg1_A DRP35, lactonase; beta 98.5 4.9E-05 1.7E-09 75.8 25.2 238 32-372 46-299 (333)
152 3c75_H MADH, methylamine dehyd 98.5 0.00011 3.9E-09 75.5 28.0 75 27-104 115-194 (426)
153 3i2k_A Cocaine esterase; alpha 98.4 2.3E-07 8E-12 100.6 7.8 106 481-609 8-116 (587)
154 3i2n_A WD repeat-containing pr 98.4 1.4E-05 4.8E-10 80.3 20.3 213 6-330 45-290 (357)
155 2ynn_A Coatomer subunit beta'; 98.4 5.6E-05 1.9E-09 74.6 24.3 194 32-333 57-259 (304)
156 2oiz_A Aromatic amine dehydrog 98.4 0.00032 1.1E-08 71.1 30.3 121 40-221 13-143 (361)
157 3fcy_A Xylan esterase 1; alpha 98.4 1.1E-06 3.6E-11 88.9 11.4 108 480-609 80-207 (346)
158 2xyi_A Probable histone-bindin 98.4 2.1E-05 7.2E-10 81.9 21.4 114 175-332 232-352 (430)
159 3ga7_A Acetyl esterase; phosph 98.4 1.6E-06 5.4E-11 86.9 12.2 102 480-609 61-167 (326)
160 2pbi_B Guanine nucleotide-bind 98.4 6.9E-05 2.4E-09 75.8 24.5 183 32-317 156-345 (354)
161 1l7a_A Cephalosporin C deacety 98.4 8E-07 2.7E-11 88.2 9.9 108 480-608 54-179 (318)
162 2oiz_A Aromatic amine dehydrog 98.4 0.00011 3.6E-09 74.6 25.7 84 18-104 40-125 (361)
163 1got_B GT-beta; complex (GTP-b 98.4 7E-05 2.4E-09 75.2 24.1 182 32-317 145-331 (340)
164 3k26_A Polycomb protein EED; W 98.4 1.8E-05 6.1E-10 79.8 19.4 113 32-220 71-194 (366)
165 3sjl_D Methylamine dehydrogena 98.4 0.00055 1.9E-08 69.2 29.8 68 35-104 82-154 (386)
166 1k8k_C P40, ARP2/3 complex 41 98.4 4.4E-05 1.5E-09 77.2 22.3 194 32-331 54-274 (372)
167 4e54_B DNA damage-binding prot 98.4 0.00012 4.1E-09 76.3 26.0 115 32-219 166-283 (435)
168 2oaj_A Protein SNI1; WD40 repe 98.4 4.9E-05 1.7E-09 87.0 24.7 203 32-333 19-242 (902)
169 4gga_A P55CDC, cell division c 98.4 0.00027 9.2E-09 73.1 28.4 58 33-104 108-165 (420)
170 3ebl_A Gibberellin receptor GI 98.3 2.7E-06 9.4E-11 86.6 12.6 109 480-609 62-196 (365)
171 3f67_A Putative dienelactone h 98.3 1E-06 3.5E-11 83.6 8.6 107 480-609 4-122 (241)
172 2pm7_B Protein transport prote 98.3 9E-05 3.1E-09 72.8 22.9 58 32-104 11-73 (297)
173 3e5z_A Putative gluconolactona 98.3 0.00025 8.7E-09 69.4 25.9 220 21-334 61-287 (296)
174 1lns_A X-prolyl dipeptidyl ami 98.3 1.8E-07 6.1E-12 104.3 2.1 59 547-609 273-347 (763)
175 1yfq_A Cell cycle arrest prote 98.3 0.00013 4.5E-09 72.7 23.1 77 6-104 34-118 (342)
176 3dr2_A Exported gluconolactona 98.3 0.00017 5.9E-09 71.1 23.5 247 19-331 35-304 (305)
177 3qh4_A Esterase LIPW; structur 98.3 3E-06 1E-10 84.5 10.4 102 480-608 58-164 (317)
178 1pgu_A Actin interacting prote 98.3 0.00027 9.3E-09 76.7 27.0 201 33-333 67-283 (615)
179 3odt_A Protein DOA1; ubiquitin 98.2 0.00053 1.8E-08 67.1 26.3 258 32-367 20-281 (313)
180 3dr2_A Exported gluconolactona 98.2 0.00058 2E-08 67.2 26.3 149 157-333 67-224 (305)
181 3vu4_A KMHSV2; beta-propeller 98.2 0.00025 8.5E-09 71.6 24.1 227 32-333 21-271 (355)
182 4ggc_A P55CDC, cell division c 98.2 0.0012 4.2E-08 64.7 28.6 250 7-371 47-303 (318)
183 3f3f_A Nucleoporin SEH1; struc 98.2 0.00019 6.5E-09 71.2 22.8 58 32-104 13-77 (351)
184 3ksr_A Putative serine hydrola 98.2 4.7E-06 1.6E-10 81.5 9.5 102 481-608 5-107 (290)
185 2dg1_A DRP35, lactonase; beta 98.2 0.00039 1.3E-08 69.2 23.8 232 7-333 68-316 (333)
186 4aow_A Guanine nucleotide-bind 98.2 0.0014 4.9E-08 64.9 27.7 194 32-333 88-286 (340)
187 3lrv_A PRE-mRNA-splicing facto 98.1 0.00031 1.1E-08 70.4 22.3 167 157-371 104-279 (343)
188 4ggc_A P55CDC, cell division c 98.1 0.0052 1.8E-07 60.0 30.7 57 34-104 29-85 (318)
189 2h7c_A Liver carboxylesterase 98.1 3E-06 1E-10 90.8 7.2 101 489-609 95-202 (542)
190 3k26_A Polycomb protein EED; W 98.1 0.00019 6.6E-09 72.0 20.3 63 32-105 117-180 (366)
191 2ghs_A AGR_C_1268P; regucalcin 98.1 0.00024 8.3E-09 70.8 20.7 137 6-217 72-209 (326)
192 3h2g_A Esterase; xanthomonas o 98.1 1.1E-05 3.8E-10 83.2 10.7 116 481-608 45-174 (397)
193 3jrp_A Fusion protein of prote 98.1 0.0004 1.4E-08 70.1 21.7 199 32-332 57-288 (379)
194 3dsm_A Uncharacterized protein 98.0 0.0086 3E-07 59.4 30.4 228 157-463 64-303 (328)
195 3bg1_A Protein SEC13 homolog; 98.0 0.00055 1.9E-08 67.7 21.5 58 32-104 15-77 (316)
196 2hm7_A Carboxylesterase; alpha 98.0 1.8E-05 6.1E-10 78.4 10.5 103 480-608 46-153 (310)
197 3dsm_A Uncharacterized protein 98.0 0.0017 5.8E-08 64.7 25.1 223 40-371 51-285 (328)
198 3jro_A Fusion protein of prote 98.0 0.00034 1.2E-08 78.5 21.8 114 32-219 11-133 (753)
199 2fuk_A XC6422 protein; A/B hyd 98.0 2.1E-05 7.3E-10 73.2 10.1 107 481-608 9-117 (220)
200 4a11_B DNA excision repair pro 98.0 0.0012 4E-08 67.3 24.2 118 176-333 247-365 (408)
201 2xyi_A Probable histone-bindin 98.0 0.00074 2.5E-08 70.1 22.9 137 32-255 183-335 (430)
202 3mmy_A MRNA export factor; mRN 98.0 0.00087 3E-08 67.1 22.9 99 32-194 41-149 (368)
203 3hrp_A Uncharacterized protein 98.0 0.0031 1.1E-07 64.9 27.1 199 33-333 133-354 (409)
204 1npe_A Nidogen, entactin; glyc 98.0 0.0023 7.9E-08 61.4 24.6 137 157-333 58-198 (267)
205 3hlk_A Acyl-coenzyme A thioest 98.0 4.7E-05 1.6E-09 79.7 13.2 87 494-608 160-247 (446)
206 3k2i_A Acyl-coenzyme A thioest 98.0 1.1E-05 3.7E-10 84.0 8.2 88 493-608 143-231 (422)
207 4ezi_A Uncharacterized protein 98.0 3.2E-05 1.1E-09 78.6 11.3 115 481-608 42-167 (377)
208 2hes_X YDR267CP; beta-propelle 98.0 0.0016 5.3E-08 64.9 23.6 58 32-104 60-125 (330)
209 1gkl_A Endo-1,4-beta-xylanase 98.0 3.5E-05 1.2E-09 75.9 11.2 109 481-609 40-165 (297)
210 2i3d_A AGR_C_3351P, hypothetic 98.0 3.9E-05 1.3E-09 73.2 11.1 105 481-608 20-128 (249)
211 3hxk_A Sugar hydrolase; alpha- 98.0 2.5E-05 8.7E-10 75.7 9.9 105 485-608 17-125 (276)
212 3iz6_a 40S ribosomal protein R 97.9 0.0016 5.5E-08 66.2 23.5 205 32-333 159-375 (380)
213 1mda_H Methylamine dehydrogena 97.9 0.0014 4.9E-08 66.1 22.5 85 63-193 47-142 (368)
214 3fak_A Esterase/lipase, ESTE5; 97.9 8.3E-06 2.9E-10 81.5 5.9 90 493-609 65-156 (322)
215 2pm7_B Protein transport prote 97.9 0.0024 8.2E-08 62.4 23.7 61 32-104 55-119 (297)
216 3d0k_A Putative poly(3-hydroxy 97.9 1.8E-05 6.3E-10 78.1 8.1 108 482-608 24-146 (304)
217 2ha2_A ACHE, acetylcholinester 97.9 1.1E-05 3.6E-10 86.5 6.8 101 489-609 93-202 (543)
218 3ain_A 303AA long hypothetical 97.9 7.8E-05 2.7E-09 74.3 12.7 102 480-608 63-168 (323)
219 3bxp_A Putative lipase/esteras 97.9 3.3E-05 1.1E-09 74.9 9.6 105 482-608 4-115 (277)
220 3trd_A Alpha/beta hydrolase; c 97.9 3.7E-05 1.3E-09 70.9 9.5 105 481-608 5-111 (208)
221 2ogt_A Thermostable carboxyles 97.9 1.7E-05 5.8E-10 84.0 7.6 103 489-609 81-193 (498)
222 4g4g_A 4-O-methyl-glucuronoyl 97.9 7.1E-06 2.4E-10 82.1 4.1 91 485-609 114-226 (433)
223 3pic_A CIP2; alpha/beta hydrol 97.9 8.6E-06 2.9E-10 80.6 4.7 85 493-609 90-192 (375)
224 2o7r_A CXE carboxylesterase; a 97.9 1.9E-05 6.5E-10 79.3 7.3 104 480-608 53-167 (338)
225 1mda_H Methylamine dehydrogena 97.9 0.0013 4.4E-08 66.5 20.7 77 27-104 62-141 (368)
226 2zsh_A Probable gibberellin re 97.8 5.4E-05 1.8E-09 76.5 10.4 106 480-608 70-196 (351)
227 1rwi_B Serine/threonine-protei 97.8 0.01 3.5E-07 56.5 26.2 223 33-372 26-252 (270)
228 1jkm_A Brefeldin A esterase; s 97.8 5.1E-05 1.7E-09 77.0 9.9 106 480-608 80-191 (361)
229 2o2g_A Dienelactone hydrolase; 97.8 3.1E-05 1.1E-09 72.0 7.7 103 480-608 10-120 (223)
230 3f3f_A Nucleoporin SEH1; struc 97.8 0.002 6.7E-08 63.7 21.5 58 32-104 59-130 (351)
231 1qe3_A PNB esterase, para-nitr 97.8 1.4E-05 4.7E-10 84.5 5.7 102 490-609 80-188 (489)
232 2wir_A Pesta, alpha/beta hydro 97.8 4.1E-05 1.4E-09 75.9 8.8 101 481-608 50-155 (313)
233 3v7d_B Cell division control p 97.8 0.034 1.1E-06 57.8 31.9 135 180-371 274-410 (464)
234 1npe_A Nidogen, entactin; glyc 97.8 0.003 1E-07 60.6 21.9 199 32-333 37-238 (267)
235 3bjr_A Putative carboxylestera 97.8 2.6E-05 9E-10 76.0 7.2 107 480-608 17-130 (283)
236 3fcx_A FGH, esterase D, S-form 97.8 2E-05 6.9E-10 76.6 5.8 113 481-609 15-148 (282)
237 2c7b_A Carboxylesterase, ESTE1 97.8 7.7E-05 2.6E-09 73.8 9.7 101 481-608 47-152 (311)
238 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.0061 2.1E-07 59.6 23.4 65 32-99 19-84 (314)
239 1jjf_A Xylanase Z, endo-1,4-be 97.7 0.00031 1.1E-08 67.7 13.6 110 481-609 31-152 (268)
240 4gq1_A NUP37; propeller, trans 97.7 0.0032 1.1E-07 64.3 21.6 50 158-219 167-219 (393)
241 1lzl_A Heroin esterase; alpha/ 97.7 8.1E-05 2.8E-09 74.2 9.1 104 480-608 49-158 (323)
242 1zi8_A Carboxymethylenebutenol 97.7 1.6E-05 5.6E-10 74.8 3.6 103 483-608 4-121 (236)
243 1ukc_A ESTA, esterase; fungi, 97.7 3.1E-05 1E-09 82.5 5.9 104 489-609 82-193 (522)
244 2ece_A 462AA long hypothetical 97.7 0.021 7.1E-07 58.4 26.1 67 301-371 323-399 (462)
245 3gre_A Serine/threonine-protei 97.7 0.0021 7.1E-08 66.6 19.6 58 32-104 65-129 (437)
246 2bce_A Cholesterol esterase; h 97.7 2.3E-05 7.9E-10 84.2 4.6 108 487-609 75-193 (579)
247 2fj0_A JuvenIle hormone estera 97.7 2.6E-05 8.9E-10 83.6 5.0 106 489-608 87-202 (551)
248 3v7d_B Cell division control p 97.7 0.05 1.7E-06 56.4 30.4 52 37-103 127-178 (464)
249 1p0i_A Cholinesterase; serine 97.6 6E-05 2E-09 80.5 7.0 103 489-609 89-197 (529)
250 1ea5_A ACHE, acetylcholinester 97.6 7.1E-05 2.4E-09 80.0 7.5 103 489-609 91-199 (537)
251 3hrp_A Uncharacterized protein 97.6 0.012 4.2E-07 60.4 24.2 60 36-104 176-236 (409)
252 2uz0_A Esterase, tributyrin es 97.6 0.00017 6E-09 69.0 9.6 113 481-609 6-124 (263)
253 3v65_B Low-density lipoprotein 97.6 0.03 1E-06 56.9 26.8 144 32-260 117-263 (386)
254 3v64_C Agrin; beta propeller, 97.6 0.053 1.8E-06 54.2 28.0 179 62-334 53-235 (349)
255 3mmy_A MRNA export factor; mRN 97.6 0.0033 1.1E-07 62.8 19.2 59 32-105 88-148 (368)
256 3v65_B Low-density lipoprotein 97.6 0.084 2.9E-06 53.6 30.5 169 155-372 94-265 (386)
257 4e15_A Kynurenine formamidase; 97.6 0.00026 9E-09 69.6 10.6 99 482-608 58-158 (303)
258 3mve_A FRSA, UPF0255 protein V 97.6 0.00013 4.3E-09 75.6 8.5 101 481-608 167-270 (415)
259 3jro_A Fusion protein of prote 97.6 0.0026 9E-08 71.2 19.8 61 32-104 55-119 (753)
260 2hes_X YDR267CP; beta-propelle 97.6 0.0082 2.8E-07 59.6 21.4 114 176-330 109-229 (330)
261 3lrv_A PRE-mRNA-splicing facto 97.6 0.0033 1.1E-07 62.7 18.6 112 32-219 127-245 (343)
262 3bg1_A Protein SEC13 homolog; 97.6 0.0045 1.5E-07 61.0 19.3 58 32-104 59-123 (316)
263 3odt_A Protein DOA1; ubiquitin 97.5 0.015 5.2E-07 56.4 22.6 110 175-333 185-296 (313)
264 1llf_A Lipase 3; candida cylin 97.5 5.6E-05 1.9E-09 80.6 4.5 109 489-609 94-208 (534)
265 3v64_C Agrin; beta propeller, 97.5 0.076 2.6E-06 53.0 27.5 144 32-260 74-220 (349)
266 2j04_B YDR362CP, TAU91; beta p 97.5 0.0039 1.3E-07 66.4 18.5 140 175-370 267-415 (524)
267 1ijq_A LDL receptor, low-densi 97.5 0.084 2.9E-06 51.9 27.1 144 32-260 31-181 (316)
268 3ls2_A S-formylglutathione hyd 97.5 0.00012 3.9E-09 71.2 6.0 69 481-563 14-84 (280)
269 3gre_A Serine/threonine-protei 97.5 0.0099 3.4E-07 61.3 21.1 51 157-220 192-247 (437)
270 1fwx_A Nitrous oxide reductase 97.5 0.0096 3.3E-07 63.0 20.6 121 33-196 87-216 (595)
271 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.028 9.5E-07 54.8 22.9 230 18-333 55-299 (314)
272 2ece_A 462AA long hypothetical 97.4 0.044 1.5E-06 56.0 24.0 62 35-103 142-204 (462)
273 1dx4_A ACHE, acetylcholinester 97.4 0.00017 5.7E-09 77.9 6.5 94 499-608 131-236 (585)
274 1thg_A Lipase; hydrolase(carbo 97.4 0.00012 4.1E-09 78.3 5.3 103 489-609 102-216 (544)
275 1rwi_B Serine/threonine-protei 97.4 0.089 3.1E-06 49.8 25.6 193 32-333 68-264 (270)
276 3hju_A Monoglyceride lipase; a 97.4 0.00079 2.7E-08 67.1 11.2 101 480-608 32-138 (342)
277 3h04_A Uncharacterized protein 97.4 0.00094 3.2E-08 63.7 11.2 98 483-608 4-102 (275)
278 1q7f_A NHL, brain tumor CG1071 97.4 0.051 1.7E-06 52.2 23.7 134 157-333 100-238 (286)
279 3p5b_L Low density lipoprotein 97.4 0.16 5.5E-06 51.7 28.4 185 62-342 92-284 (400)
280 4gq1_A NUP37; propeller, trans 97.4 0.0076 2.6E-07 61.5 18.5 58 32-104 138-204 (393)
281 3bix_A Neuroligin-1, neuroligi 97.3 0.00011 3.6E-09 79.2 4.1 104 489-608 108-217 (574)
282 2oaj_A Protein SNI1; WD40 repe 97.3 0.015 5.2E-07 66.3 22.1 127 158-333 40-182 (902)
283 2iwa_A Glutamine cyclotransfer 97.3 0.037 1.3E-06 52.7 21.0 197 33-333 23-237 (266)
284 1fwx_A Nitrous oxide reductase 97.3 0.0099 3.4E-07 62.9 18.5 179 7-219 114-309 (595)
285 2qm0_A BES; alpha-beta structu 97.3 0.00014 4.7E-09 70.7 4.1 38 481-520 17-55 (275)
286 3p5b_L Low density lipoprotein 97.3 0.16 5.3E-06 51.8 27.3 169 155-372 90-265 (400)
287 4b6g_A Putative esterase; hydr 97.2 0.00064 2.2E-08 66.0 8.1 69 483-567 23-95 (283)
288 1jfr_A Lipase; serine hydrolas 97.2 0.0011 3.9E-08 63.3 9.7 99 481-608 24-129 (262)
289 1jji_A Carboxylesterase; alpha 97.2 0.00082 2.8E-08 66.4 8.8 99 481-608 55-158 (311)
290 2oit_A Nucleoporin 214KDA; NH2 97.2 0.0025 8.6E-08 66.2 12.8 121 32-224 94-229 (434)
291 2p4o_A Hypothetical protein; p 97.2 0.19 6.6E-06 48.9 25.9 68 19-103 20-87 (306)
292 2oit_A Nucleoporin 214KDA; NH2 97.2 0.024 8.1E-07 58.8 19.8 116 176-333 151-278 (434)
293 3fvz_A Peptidyl-glycine alpha- 97.2 0.084 2.9E-06 52.1 23.3 120 177-333 198-322 (329)
294 2wtm_A EST1E; hydrolase; 1.60A 97.2 0.0011 3.8E-08 62.9 8.9 99 484-607 3-105 (251)
295 2j04_B YDR362CP, TAU91; beta p 97.1 0.016 5.6E-07 61.5 18.1 133 157-333 287-428 (524)
296 2qru_A Uncharacterized protein 97.1 0.0028 9.6E-08 61.2 11.2 94 486-608 8-102 (274)
297 3d59_A Platelet-activating fac 97.1 0.00023 8E-09 72.7 3.5 62 546-608 116-225 (383)
298 1n7d_A LDL receptor, low-densi 97.1 0.031 1.1E-06 61.7 20.7 121 178-341 456-577 (699)
299 3m0c_C LDL receptor, low-densi 97.1 0.23 7.9E-06 55.2 27.8 123 177-342 473-596 (791)
300 3fvz_A Peptidyl-glycine alpha- 97.1 0.22 7.7E-06 48.9 25.3 159 177-372 145-310 (329)
301 3bdi_A Uncharacterized protein 97.1 0.0019 6.5E-08 58.9 9.2 92 489-608 10-106 (207)
302 3no2_A Uncharacterized protein 97.1 0.23 7.9E-06 47.6 24.5 78 5-103 15-93 (276)
303 1ijq_A LDL receptor, low-densi 97.1 0.27 9.3E-06 48.2 28.8 168 156-372 9-183 (316)
304 3sov_A LRP-6, low-density lipo 97.0 0.29 9.9E-06 48.0 26.4 143 157-342 57-204 (318)
305 3vis_A Esterase; alpha/beta-hy 97.0 0.0011 3.8E-08 65.2 7.7 88 490-608 79-173 (306)
306 3m0c_C LDL receptor, low-densi 97.0 0.23 7.9E-06 55.2 27.0 201 32-334 425-633 (791)
307 3k6k_A Esterase/lipase; alpha/ 97.0 0.00084 2.9E-08 66.7 6.6 51 548-608 103-155 (322)
308 3i6y_A Esterase APC40077; lipa 97.0 0.0011 3.8E-08 64.1 7.3 69 481-563 16-86 (280)
309 3c8d_A Enterochelin esterase; 97.0 0.00053 1.8E-08 70.5 5.0 108 481-609 167-283 (403)
310 3pfb_A Cinnamoyl esterase; alp 97.0 0.0029 9.9E-08 60.4 10.0 102 481-608 21-125 (270)
311 3e4d_A Esterase D; S-formylglu 97.0 0.0011 3.8E-08 64.0 6.8 69 481-565 14-84 (278)
312 3no2_A Uncharacterized protein 97.0 0.29 1E-05 46.8 26.7 181 60-334 13-196 (276)
313 1tht_A Thioesterase; 2.10A {Vi 97.0 0.004 1.4E-07 61.2 11.0 103 482-607 7-111 (305)
314 2pbl_A Putative esterase/lipas 96.9 0.0058 2E-07 58.2 11.8 95 484-608 40-135 (262)
315 2qe8_A Uncharacterized protein 96.9 0.23 7.7E-06 49.3 23.9 142 19-223 7-159 (343)
316 1n7d_A LDL receptor, low-densi 96.9 0.02 6.8E-07 63.2 17.4 80 157-260 475-557 (699)
317 3d7r_A Esterase; alpha/beta fo 96.9 0.00073 2.5E-08 67.3 5.3 85 495-608 84-170 (326)
318 1k8q_A Triacylglycerol lipase, 96.9 0.0071 2.4E-07 60.8 12.7 113 480-607 25-150 (377)
319 3pe6_A Monoglyceride lipase; a 96.9 0.0062 2.1E-07 58.7 11.6 95 486-608 21-120 (303)
320 4a0p_A LRP6, LRP-6, low-densit 96.9 0.67 2.3E-05 50.2 28.6 181 62-334 15-198 (628)
321 1r88_A MPT51/MPB51 antigen; AL 96.8 0.0055 1.9E-07 59.4 10.6 106 480-609 9-119 (280)
322 2qe8_A Uncharacterized protein 96.8 0.15 5E-06 50.7 21.4 68 32-104 68-137 (343)
323 2w18_A PALB2, fancn, partner a 96.8 0.13 4.4E-06 50.8 19.9 64 156-220 202-271 (356)
324 1q7f_A NHL, brain tumor CG1071 96.8 0.24 8.1E-06 47.3 22.0 119 157-315 142-267 (286)
325 3sov_A LRP-6, low-density lipo 96.7 0.52 1.8E-05 46.2 26.7 168 155-372 11-185 (318)
326 1vkh_A Putative serine hydrola 96.6 0.0025 8.4E-08 61.4 6.1 51 547-608 65-120 (273)
327 3vu4_A KMHSV2; beta-propeller 96.5 0.028 9.6E-07 56.3 13.7 48 159-219 220-272 (355)
328 2iwa_A Glutamine cyclotransfer 96.5 0.59 2E-05 44.3 21.8 204 177-461 23-237 (266)
329 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.58 2E-05 48.0 23.5 134 157-333 299-442 (445)
330 2gzs_A IROE protein; enterobac 96.4 0.0017 5.7E-08 63.1 3.5 37 481-519 12-49 (278)
331 4a0p_A LRP6, LRP-6, low-densit 96.4 1.5 5.2E-05 47.4 28.1 198 32-334 38-238 (628)
332 2fx5_A Lipase; alpha-beta hydr 96.2 0.0037 1.3E-07 59.6 4.7 81 497-608 34-124 (258)
333 1sfr_A Antigen 85-A; alpha/bet 96.1 0.036 1.2E-06 54.2 11.6 108 481-609 8-126 (304)
334 3llc_A Putative hydrolase; str 95.9 0.024 8.1E-07 53.6 9.2 99 481-607 10-111 (270)
335 3nol_A Glutamine cyclotransfer 95.9 0.66 2.3E-05 43.6 18.6 109 34-219 46-156 (262)
336 2z2n_A Virginiamycin B lyase; 95.8 1.3 4.4E-05 42.0 32.3 191 32-331 16-211 (299)
337 3fnb_A Acylaminoacyl peptidase 95.8 0.0071 2.4E-07 62.1 5.0 99 481-608 134-234 (405)
338 3qqz_A Putative uncharacterize 95.6 1.5 5.2E-05 41.2 23.2 64 22-100 20-83 (255)
339 3guu_A Lipase A; protein struc 95.6 0.055 1.9E-06 55.9 10.8 116 481-608 74-203 (462)
340 3s94_A LRP-6, low-density lipo 95.4 3.8 0.00013 44.1 25.8 169 155-372 16-190 (619)
341 4f0j_A Probable hydrolytic enz 95.3 0.051 1.7E-06 52.6 9.0 100 481-607 19-119 (315)
342 1ufo_A Hypothetical protein TT 95.3 0.02 6.9E-07 53.0 5.7 93 485-608 5-111 (238)
343 2w18_A PALB2, fancn, partner a 95.1 0.92 3.1E-05 44.7 17.0 40 156-195 304-347 (356)
344 3i28_A Epoxide hydrolase 2; ar 94.8 0.13 4.5E-06 54.4 11.2 84 481-593 236-324 (555)
345 3tc9_A Hypothetical hydrolase; 94.8 0.55 1.9E-05 48.3 15.4 145 33-260 139-287 (430)
346 2z2n_A Virginiamycin B lyase; 94.7 2.9 9.8E-05 39.5 28.1 130 157-332 120-254 (299)
347 4fbl_A LIPS lipolytic enzyme; 94.6 0.04 1.4E-06 53.1 6.0 54 546-607 69-125 (281)
348 4h0c_A Phospholipase/carboxyle 94.5 0.023 8E-07 52.2 3.9 60 547-608 41-106 (210)
349 3cn9_A Carboxylesterase; alpha 94.4 0.087 3E-06 48.5 7.5 61 546-608 42-122 (226)
350 3nol_A Glutamine cyclotransfer 94.3 2.1 7.3E-05 40.2 16.7 165 156-371 64-243 (262)
351 2fp8_A Strictosidine synthase; 94.0 4.8 0.00016 38.9 20.8 36 32-77 20-55 (322)
352 3dkr_A Esterase D; alpha beta 94.0 0.067 2.3E-06 49.7 5.8 55 546-608 40-99 (251)
353 3b5e_A MLL8374 protein; NP_108 93.9 0.089 3E-06 48.3 6.6 60 547-608 49-117 (223)
354 3qit_A CURM TE, polyketide syn 93.6 0.21 7.2E-06 47.1 8.8 81 489-596 10-91 (286)
355 3nok_A Glutaminyl cyclase; bet 93.4 3.3 0.00011 39.0 16.2 128 157-334 75-211 (268)
356 2ovr_B FBW7, F-BOX/WD repeat p 93.4 7.4 0.00025 39.4 32.8 49 157-220 219-270 (445)
357 3og9_A Protein YAHD A copper i 93.4 0.18 6.1E-06 45.7 7.5 60 547-608 35-108 (209)
358 2rau_A Putative esterase; NP_3 93.2 0.14 4.8E-06 50.8 7.0 58 547-608 85-150 (354)
359 2e3j_A Epoxide hydrolase EPHB; 93.1 0.4 1.4E-05 47.7 10.3 55 489-565 9-64 (356)
360 3sre_A PON1, serum paraoxonase 93.1 2.1 7E-05 42.5 15.2 159 7-217 85-251 (355)
361 4hw6_A Hypothetical protein, I 93.0 6.2 0.00021 40.3 19.3 56 33-104 141-198 (433)
362 1imj_A CIB, CCG1-interacting f 92.9 0.031 1.1E-06 50.8 1.5 57 490-566 14-72 (210)
363 3mbr_X Glutamine cyclotransfer 92.8 5.5 0.00019 36.9 16.6 57 156-224 42-101 (243)
364 3vdx_A Designed 16NM tetrahedr 92.6 0.64 2.2E-05 48.2 11.3 81 484-593 5-88 (456)
365 3qqz_A Putative uncharacterize 92.5 6.9 0.00023 36.6 22.6 37 176-224 28-64 (255)
366 1p22_A F-BOX/WD-repeat protein 92.4 10 0.00035 38.3 23.8 54 35-104 136-189 (435)
367 1auo_A Carboxylesterase; hydro 92.3 0.65 2.2E-05 41.9 9.8 61 546-608 32-112 (218)
368 3rm3_A MGLP, thermostable mono 92.0 0.22 7.6E-06 46.9 6.4 55 546-608 58-115 (270)
369 2qc5_A Streptogramin B lactona 92.0 8.1 0.00028 36.3 28.5 130 157-332 125-259 (300)
370 3ia2_A Arylesterase; alpha-bet 91.8 0.97 3.3E-05 42.4 10.7 43 547-593 38-83 (271)
371 1zoi_A Esterase; alpha/beta hy 91.7 0.68 2.3E-05 43.8 9.5 80 487-593 4-86 (276)
372 1a88_A Chloroperoxidase L; hal 91.6 0.7 2.4E-05 43.6 9.5 80 487-593 3-85 (275)
373 2qc5_A Streptogramin B lactona 91.6 9 0.00031 35.9 27.8 192 32-332 21-217 (300)
374 3nok_A Glutaminyl cyclase; bet 91.5 4.2 0.00014 38.3 14.2 67 18-104 84-151 (268)
375 3kya_A Putative phosphatase; s 91.2 1.9 6.4E-05 44.9 12.6 62 33-104 141-210 (496)
376 1fj2_A Protein (acyl protein t 91.0 0.37 1.3E-05 44.1 6.7 60 547-608 42-119 (232)
377 2p4o_A Hypothetical protein; p 90.9 12 0.00039 35.9 22.9 40 32-79 73-112 (306)
378 3s94_A LRP-6, low-density lipo 90.9 20 0.00067 38.5 37.2 61 32-104 128-188 (619)
379 1a8s_A Chloroperoxidase F; hal 90.8 0.72 2.5E-05 43.4 8.7 18 547-565 38-56 (273)
380 3tc9_A Hypothetical hydrolase; 90.5 6.4 0.00022 40.1 16.1 50 157-218 248-301 (430)
381 3mbr_X Glutamine cyclotransfer 90.5 10 0.00035 35.1 15.7 69 18-104 52-120 (243)
382 2y6u_A Peroxisomal membrane pr 90.4 0.36 1.2E-05 48.6 6.4 63 485-565 23-96 (398)
383 2qjw_A Uncharacterized protein 89.9 0.28 9.4E-06 42.8 4.4 56 546-608 24-80 (176)
384 4g9e_A AHL-lactonase, alpha/be 89.2 0.8 2.7E-05 42.9 7.5 46 547-596 43-90 (279)
385 2h1i_A Carboxylesterase; struc 89.0 0.62 2.1E-05 42.4 6.3 60 546-608 56-125 (226)
386 1a8q_A Bromoperoxidase A1; hal 88.0 1.6 5.5E-05 41.0 8.8 18 547-565 38-56 (274)
387 2fp8_A Strictosidine synthase; 87.7 20 0.00069 34.4 22.9 62 302-372 129-204 (322)
388 1dqz_A 85C, protein (antigen 8 87.4 3.2 0.00011 39.3 10.5 57 549-609 55-121 (280)
389 4hvt_A Ritya.17583.B, post-pro 87.3 5.9 0.0002 43.3 13.7 154 5-226 269-437 (711)
390 3r0v_A Alpha/beta hydrolase fo 87.2 2.2 7.6E-05 39.3 9.2 53 486-565 6-59 (262)
391 3oos_A Alpha/beta hydrolase fa 86.3 2.5 8.6E-05 39.2 9.1 53 547-606 42-95 (278)
392 1q0r_A RDMC, aclacinomycin met 85.8 2.1 7.2E-05 40.9 8.3 16 549-565 45-61 (298)
393 3fob_A Bromoperoxidase; struct 85.8 2.9 9.8E-05 39.5 9.2 22 547-572 46-68 (281)
394 3bwx_A Alpha/beta hydrolase; Y 85.7 1.6 5.3E-05 41.4 7.2 85 482-593 5-94 (285)
395 1tca_A Lipase; hydrolase(carbo 85.0 0.43 1.5E-05 46.8 2.8 80 491-596 12-93 (317)
396 3das_A Putative oxidoreductase 84.5 32 0.0011 33.7 18.3 62 32-103 33-99 (347)
397 4i19_A Epoxide hydrolase; stru 84.1 3.6 0.00012 41.4 9.4 80 489-596 74-165 (388)
398 3kya_A Putative phosphatase; s 84.0 20 0.0007 37.0 15.0 29 178-218 313-341 (496)
399 4fhz_A Phospholipase/carboxyle 83.2 1.1 3.7E-05 43.1 4.8 61 548-608 86-163 (285)
400 4fol_A FGH, S-formylglutathion 83.2 3.5 0.00012 39.8 8.4 114 481-609 13-160 (299)
401 2vat_A Acetyl-COA--deacetylcep 82.7 3.2 0.00011 42.4 8.6 21 550-572 137-158 (444)
402 3g9x_A Haloalkane dehalogenase 82.7 2.6 9E-05 39.7 7.4 49 548-606 52-102 (299)
403 3u1t_A DMMA haloalkane dehalog 81.9 7.8 0.00027 36.4 10.6 19 546-565 47-66 (309)
404 3u0v_A Lysophospholipase-like 81.9 3.8 0.00013 37.4 8.0 24 584-608 101-124 (239)
405 1kb0_A Quinohemoprotein alcoho 81.7 55 0.0019 35.4 18.4 52 157-221 457-510 (677)
406 2yys_A Proline iminopeptidase- 81.6 4.5 0.00015 38.3 8.6 57 484-565 4-62 (286)
407 3om8_A Probable hydrolase; str 81.2 5.8 0.0002 37.0 9.2 58 486-572 8-67 (266)
408 3i1i_A Homoserine O-acetyltran 81.2 3.2 0.00011 40.8 7.7 17 549-566 79-96 (377)
409 3kxp_A Alpha-(N-acetylaminomet 80.9 2.9 9.9E-05 40.1 7.1 18 547-566 87-105 (314)
410 2cjp_A Epoxide hydrolase; HET: 80.8 3.1 0.0001 40.3 7.2 43 547-593 50-99 (328)
411 3zwu_A Alkaline phosphatase PH 80.7 2.7 9.3E-05 44.6 7.1 67 34-104 479-548 (592)
412 1xip_A Nucleoporin NUP159; bet 80.7 14 0.00048 36.9 12.1 48 157-221 146-194 (388)
413 4hw6_A Hypothetical protein, I 80.5 52 0.0018 33.3 18.8 160 245-460 142-303 (433)
414 1cru_A Protein (soluble quinop 80.3 48 0.0016 33.8 16.4 19 176-194 78-99 (454)
415 2r11_A Carboxylesterase NP; 26 80.0 6.5 0.00022 37.4 9.3 21 547-569 86-107 (306)
416 3r40_A Fluoroacetate dehalogen 80.0 7.4 0.00025 36.5 9.6 18 546-565 51-69 (306)
417 3hss_A Putative bromoperoxidas 79.8 4.7 0.00016 37.9 8.1 42 548-593 64-107 (293)
418 3sty_A Methylketone synthase 1 79.8 3.1 0.00011 38.5 6.7 24 546-573 30-54 (267)
419 2r8b_A AGR_C_4453P, uncharacte 79.7 1.7 5.7E-05 40.3 4.7 56 548-608 82-147 (251)
420 2ocg_A Valacyclovir hydrolase; 79.7 3.8 0.00013 37.8 7.3 19 546-565 42-61 (254)
421 3gff_A IROE-like serine hydrol 79.6 2.1 7.2E-05 42.0 5.5 37 481-519 11-49 (331)
422 1p22_A F-BOX/WD-repeat protein 79.5 53 0.0018 32.8 23.2 30 176-220 258-287 (435)
423 1qlw_A Esterase; anisotropic r 79.1 3.2 0.00011 40.5 6.7 18 547-565 88-106 (328)
424 2b61_A Homoserine O-acetyltran 79.1 1.6 5.5E-05 43.2 4.6 15 550-565 93-108 (377)
425 1mtz_A Proline iminopeptidase; 78.9 5.1 0.00018 37.8 8.1 41 549-593 49-93 (293)
426 4a9v_A PHOX; hydrolase, beta-p 77.2 4.9 0.00017 42.2 7.5 69 33-105 478-549 (592)
427 1wm1_A Proline iminopeptidase; 77.1 11 0.00039 35.8 10.1 17 548-565 56-73 (317)
428 3g02_A Epoxide hydrolase; alph 76.2 6.2 0.00021 39.9 8.0 78 491-596 93-180 (408)
429 3sre_A PON1, serum paraoxonase 76.0 40 0.0014 33.1 13.6 151 156-333 82-252 (355)
430 1tqh_A Carboxylesterase precur 75.9 2.8 9.6E-05 38.7 5.1 48 547-598 35-85 (247)
431 3dqz_A Alpha-hydroxynitrIle ly 75.7 5.6 0.00019 36.4 7.1 19 546-565 22-41 (258)
432 3qvm_A OLEI00960; structural g 75.5 5.1 0.00018 37.1 6.9 17 547-565 47-64 (282)
433 2xt0_A Haloalkane dehalogenase 75.3 7.3 0.00025 37.1 8.0 22 547-572 65-87 (297)
434 1b6g_A Haloalkane dehalogenase 75.3 7 0.00024 37.6 7.9 22 547-572 66-88 (310)
435 3a9g_A Putative uncharacterize 75.3 64 0.0022 31.5 19.3 68 176-260 74-151 (354)
436 2wfl_A Polyneuridine-aldehyde 75.0 4.9 0.00017 37.5 6.5 23 546-572 28-51 (264)
437 2qs9_A Retinoblastoma-binding 74.9 5.1 0.00017 35.2 6.3 19 547-566 27-47 (194)
438 3kda_A CFTR inhibitory factor 74.8 16 0.00055 34.1 10.3 18 546-565 48-66 (301)
439 1azw_A Proline iminopeptidase; 74.2 9.3 0.00032 36.3 8.5 21 548-572 53-74 (313)
440 3qmv_A Thioesterase, REDJ; alp 73.9 2 6.8E-05 40.6 3.4 18 546-565 69-87 (280)
441 1pja_A Palmitoyl-protein thioe 73.6 3.6 0.00012 39.2 5.3 45 546-597 54-101 (302)
442 1brt_A Bromoperoxidase A2; hal 72.4 4.6 0.00016 37.9 5.7 44 546-593 41-87 (277)
443 2xua_A PCAD, 3-oxoadipate ENOL 72.0 13 0.00046 34.4 8.8 58 489-572 8-66 (266)
444 1hkh_A Gamma lactamase; hydrol 72.0 5.6 0.00019 37.2 6.2 44 546-593 41-87 (279)
445 3das_A Putative oxidoreductase 71.2 80 0.0027 30.8 19.9 17 176-192 81-100 (347)
446 4dnp_A DAD2; alpha/beta hydrol 71.2 4.2 0.00015 37.4 5.0 17 547-565 39-56 (269)
447 2g8s_A Glucose/sorbosone dehyd 70.6 54 0.0018 32.0 13.3 150 179-371 22-215 (353)
448 2pl5_A Homoserine O-acetyltran 69.6 6.6 0.00023 38.4 6.3 15 550-565 84-99 (366)
449 1ys1_X Lipase; CIS peptide Leu 69.2 17 0.00057 35.3 8.9 19 546-565 32-51 (320)
450 2p9w_A MAL S 1 allergenic prot 68.5 89 0.003 30.3 17.8 63 32-104 14-83 (334)
451 3e0x_A Lipase-esterase related 68.2 12 0.0004 33.6 7.4 15 549-565 36-51 (245)
452 2ism_A Putative oxidoreductase 68.1 30 0.001 33.9 10.8 59 32-104 32-95 (352)
453 3nwo_A PIP, proline iminopepti 68.0 8.4 0.00029 37.4 6.6 17 548-565 74-92 (330)
454 2q0x_A Protein DUF1749, unchar 65.4 18 0.00062 35.1 8.5 50 548-606 61-112 (335)
455 1mj5_A 1,3,4,6-tetrachloro-1,4 65.3 16 0.00056 34.1 8.0 16 548-565 49-65 (302)
456 1xkl_A SABP2, salicylic acid-b 64.8 7.7 0.00026 36.4 5.4 19 546-565 22-41 (273)
457 3fla_A RIFR; alpha-beta hydrol 63.5 10 0.00035 34.8 6.0 17 547-565 39-56 (267)
458 3ibt_A 1H-3-hydroxy-4-oxoquino 63.4 25 0.00086 31.9 8.8 18 546-565 39-57 (264)
459 2qvb_A Haloalkane dehalogenase 63.3 19 0.00064 33.5 8.0 16 548-565 48-64 (297)
460 1uxo_A YDEN protein; hydrolase 62.9 8.5 0.00029 33.5 5.1 17 549-566 27-44 (192)
461 1ycd_A Hypothetical 27.3 kDa p 62.1 2.5 8.5E-05 38.9 1.3 60 547-608 28-108 (243)
462 1r3d_A Conserved hypothetical 61.7 15 0.00052 33.9 6.9 44 546-596 34-78 (264)
463 3c6x_A Hydroxynitrilase; atomi 61.3 9.1 0.00031 35.4 5.2 23 546-572 21-44 (257)
464 3a9g_A Putative uncharacterize 60.7 79 0.0027 30.8 12.2 62 301-372 31-95 (354)
465 1gpl_A RP2 lipase; serine este 59.9 6.1 0.00021 40.3 3.9 58 548-608 92-152 (432)
466 3fsg_A Alpha/beta superfamily 59.7 4.2 0.00014 37.5 2.5 42 548-593 41-85 (272)
467 1isp_A Lipase; alpha/beta hydr 58.5 14 0.00049 31.7 5.7 49 546-606 21-73 (181)
468 1xip_A Nucleoporin NUP159; bet 57.7 18 0.00063 36.1 6.9 78 6-104 147-231 (388)
469 1bu8_A Protein (pancreatic lip 54.3 11 0.00038 38.7 4.7 55 549-607 93-151 (452)
470 1ex9_A Lactonizing lipase; alp 54.2 39 0.0013 31.8 8.4 40 546-596 30-70 (285)
471 3b12_A Fluoroacetate dehalogen 59.1 2.7 9.2E-05 39.7 0.0 17 547-565 44-61 (304)
472 3icv_A Lipase B, CALB; circula 53.7 20 0.00067 34.7 6.1 41 547-596 86-127 (316)
473 2ism_A Putative oxidoreductase 52.5 1.7E+02 0.0058 28.3 18.4 69 176-260 76-151 (352)
474 1c4x_A BPHD, protein (2-hydrox 51.8 44 0.0015 31.0 8.3 16 548-565 52-68 (285)
475 3p2m_A Possible hydrolase; alp 49.9 27 0.00093 33.4 6.6 17 548-565 98-115 (330)
476 2ad6_A Methanol dehydrogenase 49.5 2.5E+02 0.0085 29.4 18.5 57 6-75 273-339 (571)
477 2d81_A PHB depolymerase; alpha 49.1 13 0.00043 36.1 3.9 64 490-563 199-264 (318)
478 4fle_A Esterase; structural ge 47.3 22 0.00074 31.2 5.0 18 548-566 24-44 (202)
479 3c5v_A PME-1, protein phosphat 46.9 23 0.0008 33.7 5.6 44 547-594 57-105 (316)
480 1w52_X Pancreatic lipase relat 46.5 17 0.00057 37.3 4.6 55 549-607 93-151 (452)
481 1ehy_A Protein (soluble epoxid 45.8 59 0.002 30.3 8.3 16 548-565 49-65 (294)
482 2wue_A 2-hydroxy-6-OXO-6-pheny 45.5 73 0.0025 29.7 8.8 20 548-572 59-79 (291)
483 2jnz_A PHL P 3 allergen; timot 45.4 47 0.0016 26.1 5.9 31 481-511 74-104 (108)
484 3l80_A Putative uncharacterize 44.0 29 0.00099 32.2 5.6 41 548-596 63-106 (292)
485 2p9w_A MAL S 1 allergenic prot 43.5 2.3E+02 0.008 27.3 18.2 163 178-371 16-203 (334)
486 3qyj_A ALR0039 protein; alpha/ 41.5 83 0.0028 29.4 8.5 20 548-572 45-65 (291)
487 3bf7_A Esterase YBFF; thioeste 40.6 28 0.00097 31.7 4.9 42 547-593 35-78 (255)
488 2wj6_A 1H-3-hydroxy-4-oxoquina 40.4 28 0.00094 32.5 4.8 41 548-593 47-90 (276)
489 3zwu_A Alkaline phosphatase PH 38.6 75 0.0026 33.6 8.1 67 302-375 479-553 (592)
490 3q6k_A 43.2 kDa salivary prote 37.5 1.6E+02 0.0054 29.1 9.9 62 6-79 124-198 (381)
491 2xmz_A Hydrolase, alpha/beta h 37.3 50 0.0017 30.2 6.1 21 547-572 35-56 (269)
492 3afi_E Haloalkane dehalogenase 36.4 44 0.0015 31.8 5.7 20 548-572 49-69 (316)
493 2psd_A Renilla-luciferin 2-mon 36.3 46 0.0016 31.7 5.8 41 548-596 63-106 (318)
494 2qmq_A Protein NDRG2, protein 36.1 65 0.0022 29.6 6.8 16 548-565 61-77 (286)
495 1gxs_A P-(S)-hydroxymandelonit 35.1 1.7E+02 0.0057 27.3 9.1 118 481-608 25-156 (270)
496 1u2e_A 2-hydroxy-6-ketonona-2, 33.6 55 0.0019 30.3 5.8 40 549-596 61-103 (289)
497 3n2z_B Lysosomal Pro-X carboxy 32.9 1.1E+02 0.0038 31.0 8.2 42 551-596 65-119 (446)
498 1j1i_A META cleavage compound 32.4 45 0.0015 31.3 4.9 16 548-565 59-75 (296)
499 1rp1_A Pancreatic lipase relat 31.0 39 0.0013 34.5 4.4 52 551-606 95-150 (450)
500 3v48_A Aminohydrolase, putativ 30.5 53 0.0018 30.1 5.0 41 548-596 35-78 (268)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=1.1e-36 Score=344.06 Aligned_cols=474 Identities=11% Similarity=-0.003 Sum_probs=301.4
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCC--cc--cceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KI--NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~--~~--~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~ 81 (616)
.|++.++.. |+.+++....... .. ..+.|||||++|+|..+....- -.+...++|++|+++|+.++|+...
T Consensus 37 ~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~-r~~~~~~~~~~d~~~~~~~~l~~~~ 111 (740)
T 4a5s_A 37 NILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW-RHSYTASYDIYDLNKRQLITEERIP 111 (740)
T ss_dssp EEEEEETTT----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC
T ss_pred cEEEEECCC----CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE-EEccceEEEEEECCCCcEEEcccCC
Confidence 477778754 7766664222111 12 2389999999999988631100 0022378999999999988887544
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEE
Q 007140 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (616)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (616)
.. ...+.|||||+.|+|+. ...||+
T Consensus 112 ~~-----~~~~~~SPdG~~la~~~--------------------------------------------------~~~i~~ 136 (740)
T 4a5s_A 112 NN-----TQWVTWSPVGHKLAYVW--------------------------------------------------NNDIYV 136 (740)
T ss_dssp TT-----EEEEEECSSTTCEEEEE--------------------------------------------------TTEEEE
T ss_pred Cc-----ceeeEECCCCCEEEEEE--------------------------------------------------CCeEEE
Confidence 32 56899999999999962 135777
Q ss_pred EeC-CCCeeecCCCCc--------------------eeeeeECCCCcEEEEEeccCCCcc--cc----------------
Q 007140 162 GSL-DGTAKDFGTPAV--------------------YTAVEPSPDQKYVLITSMHRPYSY--KV---------------- 202 (616)
Q Consensus 162 ~d~-~g~~~~l~~~~~--------------------~~~~~~SpDg~~i~~~~~~~~~~~--~~---------------- 202 (616)
+++ +|+.++|+..+. ...+.|||||++|+|.+.+...-. .+
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 887 557777764321 124889999999999875432100 00
Q ss_pred cCc-----ccCccEEEEeCCC---c---eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccc
Q 007140 203 PCA-----RFSQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (616)
Q Consensus 203 ~~~-----~~~~~l~~~d~~~---~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~ 271 (616)
.+. ....+|+++|+++ + +...+.. + ..+.+...-...+.|||||+. +++....
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~-~------~~~~~~~~~~~~~~wspdg~~-~~~~~~r-------- 280 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA-P------ASMLIGDHYLCDVTWATQERI-SLQWLRR-------- 280 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC-C------HHHHTSCEEEEEEEEEETTEE-EEEEEES--------
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC-C------ccCCCCCeEEEEEEEeCCCeE-EEEEeCC--------
Confidence 000 0112789999988 6 4444432 0 000000001235789999973 4333111
Q ss_pred cCCCceeEeccCCCCCCCC-------ceEec-c-cccc-----ccceeecCCCceEE-EeeeccCccEEEEEEeCCCCCC
Q 007140 272 VSPRDIIYTQPAEPAEGEK-------PEILH-K-LDLR-----FRSVSWCDDSLALV-NETWYKTSQTRTWLVCPGSKDV 336 (616)
Q Consensus 272 ~~~~~~~~~~~~~~~~~g~-------~~~l~-~-~~~~-----~~~~~wspDg~~l~-~~~~~~~~~~~l~~~d~~~~~~ 336 (616)
......++++++ .+|+ ...+. . .... ...+.|||||+.|+ +.+ .+.+..+||++++++ +
T Consensus 281 ~~~~~~i~~~d~---~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s-~~~G~~~l~~~~~~~--~ 354 (740)
T 4a5s_A 281 IQNYSVMDICDY---DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS-NEEGYRHICYFQIDK--K 354 (740)
T ss_dssp STTEEEEEEEEE---ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE-CTTSCEEEEEEETTC--S
T ss_pred CCCEEEEEEEEC---CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE-cCCCceEEEEEECCC--C
Confidence 112235777776 6565 23331 1 1111 24789999999766 444 334678999999998 4
Q ss_pred CceEEeecccccccCCCCCCCeeeCCCCCEEEEEeee--cCCcccEEEEEecCCCCCCCcceeEeeecCCCcee-eeeec
Q 007140 337 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK--ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWES 413 (616)
Q Consensus 337 ~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~--~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~ 413 (616)
+.+.|+.....-. ..+..||+.|+|.+.. .+....+|| ++++++++.. +|+..
T Consensus 355 ~~~~lT~g~~~v~--------~~~~~d~~~i~f~~~~~~~~~~~~~ly----------------~v~~~g~~~~~~lt~~ 410 (740)
T 4a5s_A 355 DCTFITKGTWEVI--------GIEALTSDYLYYISNEYKGMPGGRNLY----------------KIQLIDYTKVTCLSCE 410 (740)
T ss_dssp SCEESCCSSSCEE--------EEEEECSSEEEEEESCGGGCTTCBEEE----------------EEETTEEEEEEESSTT
T ss_pred ceEecccCCEEEE--------EEEEEeCCEEEEEEecCCCCCceeEEE----------------EEECCCCCcceeeccc
Confidence 5677765433210 1123458888888764 222233444 5677655433 45422
Q ss_pred CCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCC---CcccCC-ceeEEEEEC
Q 007140 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY---PTLASL-QKEMIKYQR 489 (616)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~---~~~~~~-~~e~i~~~~ 489 (616)
... .-.+.. ..+||++++++++..+++. ||.+++++..+++..+++..+... .....+ ..+.+++ +
T Consensus 411 ~~~-~~~~~~-------~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~ 480 (740)
T 4a5s_A 411 LNP-ERCQYY-------SVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-I 480 (740)
T ss_dssp TST-TTBCBE-------EEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-E
T ss_pred cCC-CCCceE-------EEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-c
Confidence 100 001111 2568999999999999887 899999998888776666543211 111223 6788888 7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh-hCCeEEEE-CCCCCcc
Q 007140 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLA-GPSIPII 567 (616)
Q Consensus 490 ~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la-~~Gy~Vl~-n~R~GS~ 567 (616)
.||.+|+++|++|+++++++++ |+||++|+++. .+.. ...| ...+.++++ ++||+|+. |+| |+.
T Consensus 481 ~dg~~l~~~~~~P~~~~~~~~~--P~vv~~HGg~~------~~~~--~~~~---~~~~~~~l~~~~G~~Vv~~D~r-G~g 546 (740)
T 4a5s_A 481 LNETKFWYQMILPPHFDKSKKY--PLLLDVYAGPC------SQKA--DTVF---RLNWATYLASTENIIVASFDGR-GSG 546 (740)
T ss_dssp ETTEEEEEEEEECTTCCTTSCE--EEEEECCCCTT------CCCC--CCCC---CCSHHHHHHHTTCCEEEEECCT-TCS
T ss_pred cCCeEEEEEEEeCCCCCCCCCc--cEEEEECCCCc------cccc--cccc---CcCHHHHHHhcCCeEEEEEcCC-CCC
Confidence 8999999999999999887766 89999854321 1110 1223 223445566 59999999 999 999
Q ss_pred ccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 568 GEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 568 GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
++|.+|.. ++||..+++|+++++++|++++++|++||+|.+-
T Consensus 547 ~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~ 591 (740)
T 4a5s_A 547 YQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGW 591 (740)
T ss_dssp SSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred cCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEE
Confidence 99999875 7888899999999999999999999999999873
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.2e-33 Score=319.65 Aligned_cols=461 Identities=12% Similarity=0.085 Sum_probs=306.9
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCC-----------------------CcccceEEccCCCeEEEEEeeccccccCCCc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDG-----------------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCK 61 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~-----------------------~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~ 61 (616)
..|++.++.. |+.++++..... ..+..++|||||++|+|.+.
T Consensus 64 ~~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----------- 128 (741)
T 2ecf_A 64 LDLWSYDIGS----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----------- 128 (741)
T ss_dssp EEEEEEETTT----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-----------
T ss_pred cEEEEEECCC----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-----------
Confidence 3688988864 887777643221 12678999999999999862
Q ss_pred eeEEEEECCCC---ceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccc
Q 007140 62 LRVWIADAETG---EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (616)
Q Consensus 62 ~~l~v~~~~~g---~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 138 (616)
.+||+++++++ +.++++..... +..+.|||||++|+|..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~-----~~~~~~SPDG~~la~~~--------------------------------- 170 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGF-----ATDAKLSPKGGFVSFIR--------------------------------- 170 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSC-----EEEEEECTTSSEEEEEE---------------------------------
T ss_pred CcEEEEECCCCCcceEEEcccCCcc-----cccccCCCCCCEEEEEe---------------------------------
Confidence 68999999998 77788755331 56899999999999962
Q ss_pred cccccCCCcccceeEeccceEEEEeC-CCCeeecCCCCc------------------eeeeeECCCCcEEEEEeccCCCc
Q 007140 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV------------------YTAVEPSPDQKYVLITSMHRPYS 199 (616)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~~------------------~~~~~~SpDg~~i~~~~~~~~~~ 199 (616)
..+|+++|+ +++..+++.... ...++|||||++|++........
T Consensus 171 -----------------~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 171 -----------------GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPV 233 (741)
T ss_dssp -----------------TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTS
T ss_pred -----------------CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCC
Confidence 125788888 556666654321 25789999999999986543100
Q ss_pred c---------------cccCc-----ccCccEEEEeCCC-ceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEE
Q 007140 200 Y---------------KVPCA-----RFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (616)
Q Consensus 200 ~---------------~~~~~-----~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~ 258 (616)
. .+.+. .....|+++|+.+ ++...+...... ......+.| |||+. |+
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~~-pDg~~-l~ 301 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQ----------DIYLARVNW-RDPQH-LS 301 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCS----------SEEEEEEEE-EETTE-EE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCc----------ceEEEEEEe-CCCCE-EE
Confidence 0 00000 0122789999988 776655421000 011235889 99985 55
Q ss_pred EEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccc-----cccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~-----~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
+... +.. .....+++++. .+++.+.+..... ....+.|||||+. ++.... ++..+||.+++++
T Consensus 302 ~~~~-~~~------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~-~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 302 FQRQ-SRD------QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGSI-LWSSER-TGFQHLYRIDSKG 369 (741)
T ss_dssp EEEE-ETT------SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSCE-EEEECT-TSSCEEEEECSSS
T ss_pred EEEe-ccc------CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCeE-EEEecC-CCccEEEEEcCCC
Confidence 5422 111 12346777787 6667666543321 2357899999994 443322 3556999999876
Q ss_pred CCCCceEEeecccccccCCCCCCCe-eeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeee
Q 007140 334 KDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (616)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~g~~~~-~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (616)
. .+.|+.....- . .+ .|++||+.|++.....+....+|| +++...+..+.|..
T Consensus 370 --~-~~~l~~~~~~v-~------~~~~~s~dg~~l~~~~~~~~~~~~~l~----------------~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 370 --K-AAALTHGNWSV-D------ELLAVDEKAGLAYFRAGIESARESQIY----------------AVPLQGGQPQRLSK 423 (741)
T ss_dssp --C-EEESCCSSSCE-E------EEEEEETTTTEEEEEECSSCTTCBEEE----------------EEETTCCCCEECCC
T ss_pred --C-eeeeeecceEE-E------eEeEEeCCCCEEEEEEeCCCCceEEEE----------------EEEcCCCCeeeccc
Confidence 3 45454322110 0 13 599999998887753321133454 45554444555543
Q ss_pred cCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCC-C---CCccc--CC-ceeEE
Q 007140 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-P---YPTLA--SL-QKEMI 485 (616)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~-~---~~~~~--~~-~~e~i 485 (616)
. ..+.. ..||+|++++++..++...|+++|+++..++..+.|+.... . ..... .+ .++.+
T Consensus 424 ~------~~~~~-------~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (741)
T 2ecf_A 424 A------PGMHS-------ASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFG 490 (741)
T ss_dssp S------CSEEE-------EEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEE
T ss_pred C------CCceE-------EEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEE
Confidence 1 11111 46899999999999999999999999987766666765432 0 11222 45 89999
Q ss_pred EEECCCC-cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEEEE-CC
Q 007140 486 KYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLA-GP 562 (616)
Q Consensus 486 ~~~~~DG-~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~Vl~-n~ 562 (616)
++++.|| .+|++++++|+++++++++ |+||++|++.. . ......|..... ...+.|+++||+|+. |+
T Consensus 491 ~~~~~~g~~~l~~~~~~P~~~~~~~~~--p~vv~~hG~~~------~--~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 560 (741)
T 2ecf_A 491 TLTAADGKTPLNYSVIKPAGFDPAKRY--PVAVYVYGGPA------S--QTVTDSWPGRGDHLFNQYLAQQGYVVFSLDN 560 (741)
T ss_dssp EEECTTSSCEEEEEEECCSSCCTTSCE--EEEEECCCSTT------C--CSCSSCCCCSHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEcCCCCEEEEEEEEeCCCCCCCCCc--CEEEEEcCCCC------c--ccccccccccchhHHHHHHHhCCCEEEEEec
Confidence 9999999 9999999999998776655 89998854311 0 000112311000 257889999999999 99
Q ss_pred CCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 563 SIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 563 R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
| |+.++|..|.. .+|+..+++|+.+++++|.+++.+|++||++.+.
T Consensus 561 r-G~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~ 609 (741)
T 2ecf_A 561 R-GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGW 609 (741)
T ss_dssp T-TCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred C-CCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEE
Confidence 9 99888887763 6778889999999999999999999999998763
No 3
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=4e-33 Score=311.29 Aligned_cols=445 Identities=14% Similarity=0.087 Sum_probs=296.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccc--cc--cceEEe--cCCcE-EEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNA--VF--GSFVWV--NNSTL-LIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~--~~--~~~~ws--pdg~~-l~~~ 104 (616)
.+..|+||+| +++|+..+..+ ++...||++ ..+|+.++||......... .. ..+.|+ |||+. |+|.
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~~~----~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRPAE----AGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp CCEEEEEETT--EEEEEEEETTT----TTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred ccceeEEcCC--eEEEEecCccc----CCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 4788999954 78998875221 456789988 5678889998654211000 01 146677 99998 8885
Q ss_pred ecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC----CCeeecCCC-----C
Q 007140 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGTP-----A 175 (616)
Q Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~----g~~~~l~~~-----~ 175 (616)
.. ...+||++++. ++.++|+.. .
T Consensus 98 ~~------------------------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HF------------------------------------------------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BT------------------------------------------------TTCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred EC------------------------------------------------CCCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 21 02468999987 678888762 2
Q ss_pred -ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC------ceEEEec-CCCCCCCCCccccCccCCCCcc
Q 007140 176 -VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMRSI 247 (616)
Q Consensus 176 -~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 247 (616)
....++|||||++|++.+...... .+ .....+|+++|+.+ ++.+.++ ... .....+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~--~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------------~~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE--GP-SDVRRFLAAVPLDGSAAADRSAVRELSDDAH-------------RFVTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS--ST-TCEEEEEEEEETTSTTTTCGGGSEESSCSCS-------------SEECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCC--CC-CCceeEEEEEECCCCccccCCceeEEEecCC-------------CcccCc
Confidence 456899999999999997542100 00 00135899999988 7777766 311 012358
Q ss_pred eeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCC-CC---CceEeccc-cccccceeecCCCceEEEeeeccCc
Q 007140 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYKTS 322 (616)
Q Consensus 248 ~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g---~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~ 322 (616)
.|||||+. |++.........+ ....++++++ + +| +.+.+... ......+.|||||+ +++....+ +
T Consensus 194 ~~SpDG~~-la~~~~~~~~~~~----~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~-~ 263 (662)
T 3azo_A 194 RLSPDGRQ-AVWLAWDHPRMPW----EGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT-G 263 (662)
T ss_dssp EECTTSSE-EEEEEECTTCCTT----TCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT-S
T ss_pred eECCCCCE-EEEEECCCCCCCC----CCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC-C
Confidence 89999984 7666432111000 1246788787 5 35 45556543 45667899999999 55554332 4
Q ss_pred cEEEEEEeCCCCCCCceEEeecccc--cccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEee
Q 007140 323 QTRTWLVCPGSKDVAPRVLFDRVFE--NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (616)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l~~~~~~--~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~ 400 (616)
..+||++++++ ++.+.++..... .....++...++++++|+.++... . + ...|| .+
T Consensus 264 ~~~l~~~~~~~--~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-~-~--~~~l~----------------~~ 321 (662)
T 3azo_A 264 WWNLHRVDPAT--GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-K-G--AAVLG----------------IL 321 (662)
T ss_dssp SCEEEEECTTT--CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-S-S--SCEEE----------------EE
T ss_pred CeEEEEEECCC--CceeecccccccccCccccccCceEeEeCCCEEEEEEE-c-C--ccEEE----------------EE
Confidence 45899999976 344555432211 100011122356666766444332 1 1 22333 56
Q ss_pred ecCCCceeeeeecCCcccceeeEEeecCCCcccc-cccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcccC
Q 007140 401 DINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLAS 479 (616)
Q Consensus 401 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~~~ 479 (616)
|+++++.+.|.... ..+. .+ +++++.+++..++...|++||++++++++.++|+..+.+......
T Consensus 322 d~~~~~~~~l~~~~-----~~~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~ 387 (662)
T 3azo_A 322 DPESGELVDAAGPW-----TEWA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAY 387 (662)
T ss_dssp ETTTTEEEECCSSC-----CEEE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGG
T ss_pred ECCCCcEEEecCCC-----CeEE---------EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccc
Confidence 77777766553211 1111 23 667888999999999999999999999999999876544444444
Q ss_pred C-ceeEEEEECCCCcEEEEEEEcCCCCC----CCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC
Q 007140 480 L-QKEMIKYQRKDGVPLTATLYLPPGYD----QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (616)
Q Consensus 480 ~-~~e~i~~~~~DG~~l~g~l~~P~~~~----~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~ 554 (616)
+ .++.+.+++.||.+|+++|++|++++ +++++ |+||++|++.. ......| . ...+.|+++
T Consensus 388 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~--p~vv~~HG~~~---------~~~~~~~---~-~~~~~l~~~ 452 (662)
T 3azo_A 388 YPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELP--PYVVMAHGGPT---------SRVPAVL---D-LDVAYFTSR 452 (662)
T ss_dssp SCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCC--CEEEEECSSSS---------SCCCCSC---C-HHHHHHHTT
T ss_pred cCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCc--cEEEEECCCCC---------ccCcccc---h-HHHHHHHhC
Confidence 5 78999999999999999999999976 44545 88888843210 0000122 2 567899999
Q ss_pred CeEEEE-CCCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 555 RFAVLA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 555 Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
||+|+. |+| ||.|||+.|.. ++|+..+++|+++++++|++++.+|++||+|.+-
T Consensus 453 G~~v~~~d~r-G~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~ 510 (662)
T 3azo_A 453 GIGVADVNYG-GSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGG 510 (662)
T ss_dssp TCEEEEEECT-TCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEE
T ss_pred CCEEEEECCC-CCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEE
Confidence 999999 999 99999999874 6788889999999999999999999999999874
No 4
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2e-32 Score=308.08 Aligned_cols=437 Identities=11% Similarity=0.070 Sum_probs=290.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..++|||| ++|+|..+ ..||++|+++++.++++..... +..+.|||||+.|+|..
T Consensus 83 ~v~~~~~spd-~~~~~~~~-----------~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~SpdG~~la~~~------ 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQ-----------GGLVGFDMLARKVTYLFDTNEE-----TASLDFSPVGDRVAYVR------ 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEET-----------TEEEEEETTTTEEEEEECCTTC-----CTTCEECTTSSEEEEEE------
T ss_pred CceeEEECCC-CeEEEEEC-----------CEEEEEECCCCceEEccCCccc-----ccCCcCCCCCCEEEEEE------
Confidence 3778999999 88888752 6899999999988888754331 56899999999998851
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-C-----CCeeecCCCC-c--------
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D-----GTAKDFGTPA-V-------- 176 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~-----g~~~~l~~~~-~-------- 176 (616)
...|+++++ + |+.++++... .
T Consensus 140 --------------------------------------------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 140 --------------------------------------------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp --------------------------------------------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred --------------------------------------------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 135777777 5 6666665432 1
Q ss_pred -------eeeeeECCCCcEEEEEeccCCCccc---------------ccC-----cccCccEEEEeCCCceEEEecCCCC
Q 007140 177 -------YTAVEPSPDQKYVLITSMHRPYSYK---------------VPC-----ARFSQKVQVWTTDGKLVRELCDLPP 229 (616)
Q Consensus 177 -------~~~~~~SpDg~~i~~~~~~~~~~~~---------------~~~-----~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (616)
...+.|||||++|++...+...... ..+ ......|+++|+++++.+.+.....
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 3689999999999998732110000 000 0013579999999887766543100
Q ss_pred CCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCC-CceEeccc-cc----cccc
Q 007140 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKL-DL----RFRS 303 (616)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~-~~----~~~~ 303 (616)
. ......+.|||||+. |++.. .+.. .....+++++. .++ ..+.+... .. ....
T Consensus 256 ~----------~~~~~~~~~spdg~~-l~~~~-~~~~------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 256 K----------EKFLTNLSWSPDENI-LYVAE-VNRA------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp T----------TCEEEEEEECTTSSE-EEEEE-ECTT------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSC
T ss_pred C----------ceeEeeEEEECCCCE-EEEEE-eCCC------CCeeEEEEEEC---CCCceeeEEEEccCCCeECccCC
Confidence 0 011235899999984 55542 2211 12236777787 655 44444322 11 1246
Q ss_pred eeecC--CCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEE
Q 007140 304 VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 381 (616)
Q Consensus 304 ~~wsp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l 381 (616)
+.||| ||+.++... . ++..+||.+++++ +..+.|+.....- . ..+.|+|||+.|++.....+.....+
T Consensus 315 ~~~sp~~dg~~l~~~~-~-~g~~~l~~~~~~~--~~~~~l~~~~~~v-~-----~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSR-R-DGWNHLYLYDTTG--RLIRQVTKGEWEV-T-----NFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CEECTTCSSEEEEEEC-T-TSSCEEEEEETTS--CEEEECCCSSSCE-E-----EEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred ceeecCCCCEEEEEEc-c-CCccEEEEEECCC--CEEEecCCCCeEE-E-----eeeEEcCCCCEEEEEecCCCCceEEE
Confidence 79999 998554432 2 3556899999765 2334443322110 0 01689999999988875332112344
Q ss_pred EEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCC
Q 007140 382 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (616)
Q Consensus 382 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~ 461 (616)
| ++|+++++.+.|.... .+.. ..||+|++++++..++.+.|++++++++++
T Consensus 385 ~----------------~~d~~~~~~~~l~~~~------~~~~-------~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 385 Y----------------CIDIKGGKTKDLTPES------GMHR-------TQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp E----------------EEETTCCCCEESCCSS------SEEE-------EEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred E----------------EEEcCCCCceeccCCC------ceEE-------EEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 4 5777777766664211 1222 468999999999999999999999999988
Q ss_pred CceeeeeeCCCCCCcccCC-ceeEEEEECCCC-cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCc
Q 007140 462 KKSSQITNFPHPYPTLASL-QKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 539 (616)
Q Consensus 462 ~~~~~Lt~~~~~~~~~~~~-~~e~i~~~~~DG-~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~ 539 (616)
++.+.++.. ++... ..+ .++.+++++.|| .++++++++|+++++++++ |+||++|+++. . ......
T Consensus 436 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~--p~iv~~HGg~~------~--~~~~~~ 503 (706)
T 2z3z_A 436 GSHTLLEAK-NPDTG-YAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKY--PVIVYVYGGPH------A--QLVTKT 503 (706)
T ss_dssp CEEEEEECC--------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCE--EEEEECCCCTT------C--CCCCSC
T ss_pred CeEeecccc-chhhh-cCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCc--cEEEEecCCCC------c--eeeccc
Confidence 874445544 23322 234 889999999999 9999999999999887766 88888854321 0 000122
Q ss_pred cCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 540 FSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 540 ~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|......+.++|+++||+|+. |+| |+.++|..|.. .+|+..+++|+++++++|.+++.+|++||+|.+
T Consensus 504 ~~~~~~~~~~~la~~G~~v~~~d~r-G~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G 575 (706)
T 2z3z_A 504 WRSSVGGWDIYMAQKGYAVFTVDSR-GSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHG 575 (706)
T ss_dssp C----CCHHHHHHHTTCEEEEECCT-TCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEE
T ss_pred cccCchHHHHHHHhCCcEEEEEecC-CCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEE
Confidence 311001257899999999999 999 99988888764 688889999999999999999999999999876
No 5
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=314.41 Aligned_cols=472 Identities=13% Similarity=0.035 Sum_probs=295.0
Q ss_pred eeEEeecCCCCCCCCceeeecCCCC--CcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce---EecccC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFES 80 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~--~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~---~~lt~~ 80 (616)
.|++.++.. |+.++++..... ..+..++|||||++|||.+..+.. -.......||++++++|+. ++++
T Consensus 37 ~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~-~~~s~~~~i~~~d~~~g~~~~~~~l~-- 109 (719)
T 1z68_A 37 NIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKL-WRYSYTATYYIYDLSNGEFVRGNELP-- 109 (719)
T ss_dssp CEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEEC-SSSCEEEEEEEEETTTTEECCSSCCC--
T ss_pred CEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCcee-EEeecceEEEEEECCCCccccceecC--
Confidence 578888754 888887632111 026799999999999998864100 0001247899999999987 5553
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEE
Q 007140 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (616)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (616)
. . +..+.|||||+.|+|.. ...|+
T Consensus 110 -~-~----~~~~~~SPDG~~la~~~--------------------------------------------------~~~i~ 133 (719)
T 1z68_A 110 -R-P----IQYLCWSPVGSKLAYVY--------------------------------------------------QNNIY 133 (719)
T ss_dssp -S-S----BCCEEECSSTTCEEEEE--------------------------------------------------TTEEE
T ss_pred -c-c----cccceECCCCCEEEEEE--------------------------------------------------CCeEE
Confidence 2 1 56899999999999962 12577
Q ss_pred EEeC-CCCeeecCCCCc--------------------eeeeeECCCCcEEEEEeccCCCcc----------------ccc
Q 007140 161 LGSL-DGTAKDFGTPAV--------------------YTAVEPSPDQKYVLITSMHRPYSY----------------KVP 203 (616)
Q Consensus 161 ~~d~-~g~~~~l~~~~~--------------------~~~~~~SpDg~~i~~~~~~~~~~~----------------~~~ 203 (616)
++++ +|+.++|+.... ...++|||||++|++.+.+..... .+.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 7777 556666653220 137999999999999875421100 000
Q ss_pred Cc-----ccCccEEEEeCCCceEE---EecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCC
Q 007140 204 CA-----RFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPR 275 (616)
Q Consensus 204 ~~-----~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~ 275 (616)
+. ....+|+++|+++++.. .+.. |..+.........+.||||++ +++.. .+.. ...
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~SpD~~--~~~~~-~~~~------~~~ 277 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV-------PAMIASSDYYFSWLTWVTDER--VCLQW-LKRV------QNV 277 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCC-------CHHHHTSCEEEEEEEESSSSE--EEEEE-EESS------TTE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccC-------CccCCCCcceEEEeEEeCCCe--EEEEE-eccc------cCe
Confidence 00 01237899999877542 2211 000000001123588999964 44432 1111 112
Q ss_pred ceeEecc----CCCCCCCCceEecc-----cccccc-----ceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEE
Q 007140 276 DIIYTQP----AEPAEGEKPEILHK-----LDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (616)
Q Consensus 276 ~~~~~~~----~~~~~~g~~~~l~~-----~~~~~~-----~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (616)
..+++++ + .+|+.+.+.. ...... .+.|||||+.+++......+..+||+++++++ +.+.|
T Consensus 278 ~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~l 352 (719)
T 1z68_A 278 SVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQI 352 (719)
T ss_dssp EEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEEC
T ss_pred EEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEec
Confidence 3567777 6 5555555542 222233 78999999976553223345679999999874 45666
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEEeee--cCCcccEEEEEecCCCCCCCcceeEeeecCCC--ceeeeeecCCcc
Q 007140 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK--ENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESNREK 417 (616)
Q Consensus 342 ~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~--~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~ 417 (616)
+.....- . .+.++ +|+.|++.... ......+|| +++++++ +.+.|+..-..
T Consensus 353 t~~~~~v-~------~~~~~-d~~~i~~~~~~~~~~~~~~~l~----------------~~~~~~g~~~~~~l~~~~~~- 407 (719)
T 1z68_A 353 TSGKWEA-I------NIFRV-TQDSLFYSSNEFEEYPGRRNIY----------------RISIGSYPPSKKCVTCHLRK- 407 (719)
T ss_dssp SCSSSCE-E------EEEEE-CSSEEEEEESCGGGCTTCBEEE----------------EEECSSSSCCEEESSTTTTT-
T ss_pred ccCceEE-E------EEEEE-eCCEEEEEEecCCCCCceEEEE----------------EEeCCCCCCCceeccCccCC-
Confidence 5332210 0 03444 88888888754 111233454 4565444 23444321000
Q ss_pred cceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCC---CcccCC-ceeEEEEECCCCc
Q 007140 418 YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY---PTLASL-QKEMIKYQRKDGV 493 (616)
Q Consensus 418 ~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~---~~~~~~-~~e~i~~~~~DG~ 493 (616)
...... ...|++|++++++..++.+.| .++++++++++..+++..+... .+...+ .++.+++++.| .
T Consensus 408 ~~~~~~-------~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 478 (719)
T 1z68_A 408 ERCQYY-------TASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-I 478 (719)
T ss_dssp TTBCBE-------EEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-E
T ss_pred CCCceE-------EEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-e
Confidence 001111 145789999999988888877 5889998888876676654321 222234 78999999988 9
Q ss_pred EEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHH-HHhhCCeEEEE-CCCCCccccCC
Q 007140 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IFLARRFAVLA-GPSIPIIGEGD 571 (616)
Q Consensus 494 ~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q-~la~~Gy~Vl~-n~R~GS~GyG~ 571 (616)
+|++++++|+++++++++ |+||++|++.. .......| ...+.+ +++++||+|+. |+| |+.++|.
T Consensus 479 ~l~~~~~~P~~~~~~~~~--p~vl~~hG~~~--------~~~~~~~~---~~~~~~~l~~~~G~~v~~~d~r-G~g~~~~ 544 (719)
T 1z68_A 479 TLWYKMILPPQFDRSKKY--PLLIQVYGGPC--------SQSVRSVF---AVNWISYLASKEGMVIALVDGR-GTAFQGD 544 (719)
T ss_dssp EEEEEEEECTTCCSSSCE--EEEEEECCCTT--------BCCCCCCC---CCCHHHHHHHTTCCEEEEEECT-TBSSSCH
T ss_pred EEEEEEEeCCCCCCCCCc--cEEEEECCCCC--------cCcccccc---hhhHHHHHHhcCCeEEEEEcCC-CCCCCch
Confidence 999999999998876655 88888854311 01001122 212334 44589999999 999 9999998
Q ss_pred CccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 572 KLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 572 ~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
.|.. ++|+..+++|+++++++|++++.+|++||+|.+.
T Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~ 585 (719)
T 1z68_A 545 KLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGW 585 (719)
T ss_dssp HHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEE
T ss_pred hhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 8764 6788899999999999999999999999999873
No 6
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=3.2e-33 Score=315.32 Aligned_cols=479 Identities=11% Similarity=-0.019 Sum_probs=293.6
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCC--cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~--~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (616)
.|++.++.. |+.+++....... .+..++|||||++|+|........ .......||++++++|+.++++.....
T Consensus 38 ~i~~~d~~~----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~l~~~~~~ 112 (723)
T 1xfd_A 38 TVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIY-QHSYTGYYVLSKIPHGDPQSLDPPEVS 112 (723)
T ss_dssp CEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCS-SSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred CEEEEECCC----CcEEEEeccccccccccceEEECCCCCEEEEEecCccce-eecceeeEEEEECCCCceEeccCCccc
Confidence 466666653 7766665322210 267899999999999987531100 001237899999999988888644321
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEe
Q 007140 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (616)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d 163 (616)
...+..+.|||||+.|+|... .+|++++
T Consensus 113 --~~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~~ 140 (723)
T 1xfd_A 113 --NAKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYCA 140 (723)
T ss_dssp --SCCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEES
T ss_pred --cccccccEECCCCCEEEEEEC--------------------------------------------------CeEEEEE
Confidence 111457899999999999621 2577777
Q ss_pred C-CCCeeecCCCC--c------------------eeeeeECCCCcEEEEEeccCCCccc----------------ccC--
Q 007140 164 L-DGTAKDFGTPA--V------------------YTAVEPSPDQKYVLITSMHRPYSYK----------------VPC-- 204 (616)
Q Consensus 164 ~-~g~~~~l~~~~--~------------------~~~~~~SpDg~~i~~~~~~~~~~~~----------------~~~-- 204 (616)
+ +|+.++++... . ...++|||||++|++.+........ +.+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 7 45666654321 1 1479999999999998754310000 000
Q ss_pred -c--ccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEe
Q 007140 205 -A--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYT 280 (616)
Q Consensus 205 -~--~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~ 280 (616)
+ .....|+++|+.+++. +.+..... +.........+.|||||+. |+.... .+ .....+++
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~SpDg~~-l~~~~~--~~------~~~~~i~~ 284 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDD-------PRMREYYITMVKWATSTKV-AVTWLN--RA------QNVSILTL 284 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCC-------GGGSSEEEEEEEESSSSEE-EEEEEE--TT------SCEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCcc-------CCCccceeEEEEEeCCCeE-EEEEEc--CC------CCeEEEEE
Confidence 0 0123799999987763 55442100 0000001235899999973 433211 11 12346777
Q ss_pred ccCCCCCCCCceEeccc--cccc----cceeecCCCceEEEeeeccCc----cEEEEEEe-CCCCCCC---ceEEeeccc
Q 007140 281 QPAEPAEGEKPEILHKL--DLRF----RSVSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRVF 346 (616)
Q Consensus 281 ~~~~~~~~g~~~~l~~~--~~~~----~~~~wspDg~~l~~~~~~~~~----~~~l~~~d-~~~~~~~---~~~l~~~~~ 346 (616)
+++ .+++...+... .... ..+.|||||+.|++......+ ..+||++| ..+ +. .+.|+....
T Consensus 285 ~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 285 CDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITSGDW 359 (723)
T ss_dssp EET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCCSSS
T ss_pred EeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC--CCccceeEeecCCe
Confidence 787 66676655422 1221 378999999976654211223 56899999 455 33 344443221
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCC-ceeeeeecCCcccceeeEEe
Q 007140 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAVAL 425 (616)
Q Consensus 347 ~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~~~ 425 (616)
.. . ..++|+|||+.|++.....+....+|| ++++.++ +...|...... ...+.
T Consensus 360 ~~-~-----~~~~~spdg~~l~~~~~~~~~~~~~l~----------------~~~~~~~~~~~~l~~~~~~--~~~~~-- 413 (723)
T 1xfd_A 360 DV-T-----KILAYDEKGNKIYFLSTEDLPRRRQLY----------------SANTVGNFNRQCLSCDLVE--NCTYF-- 413 (723)
T ss_dssp CE-E-----EEEEEETTTTEEEEEESSSCTTCCEEE----------------EECSSTTCCCBCSSTTSSS--SCCCC--
T ss_pred EE-E-----eeeEEcCCCCEEEEEEcCCCCcceEEE----------------EEeCCCCCCcceecccccC--CCCeE--
Confidence 10 0 016899999999887653211233444 4555443 23334321000 00111
Q ss_pred ecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCC---CCcccCC-ceeEEEEECCCCcEEEEEEEc
Q 007140 426 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP---YPTLASL-QKEMIKYQRKDGVPLTATLYL 501 (616)
Q Consensus 426 ~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~---~~~~~~~-~~e~i~~~~~DG~~l~g~l~~ 501 (616)
...|++|++++++..++.+.|+.+++ +...++...+...+.. ......+ .+|.+++++.|| +|+++|++
T Consensus 414 -----~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~ 486 (723)
T 1xfd_A 414 -----SASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILK 486 (723)
T ss_dssp -----EEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEB
T ss_pred -----EEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEe
Confidence 24689999999999999999986654 6554443222222110 1112234 788999999999 99999999
Q ss_pred CCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEEEE-CCCCCccccCCCccC---C
Q 007140 502 PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---D 576 (616)
Q Consensus 502 P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~ 576 (616)
|+++++++++ |+||++|++.. . ......| .+ +..++|+++||+|+. |+| |+.++|.+|.. .
T Consensus 487 P~~~~~~~~~--p~vv~~HG~~~------~--~~~~~~~---~~~~~~~~l~~~G~~vv~~d~r-G~g~~g~~~~~~~~~ 552 (723)
T 1xfd_A 487 PATFTDTTHY--PLLLVVDGTPG------S--QSVAEKF---EVSWETVMVSSHGAVVVKCDGR-GSGFQGTKLLHEVRR 552 (723)
T ss_dssp CSSCCSSSCE--EEEEECCCCTT------C--CCCCCCC---CCSHHHHHHHTTCCEEECCCCT-TCSSSHHHHHHTTTT
T ss_pred CCCCCCCCcc--CEEEEEcCCCC------c--cccCccc---cccHHHHHhhcCCEEEEEECCC-CCccccHHHHHHHHh
Confidence 9999876655 88998854311 0 0001122 21 345678889999999 999 99999988763 6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 577 RFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 577 ~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
.|+..+++|+++++++|.+++.+|++||+|.+-
T Consensus 553 ~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~ 585 (723)
T 1xfd_A 553 RLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGK 585 (723)
T ss_dssp CTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEE
T ss_pred ccCcccHHHHHHHHHHHHhCCCcChhhEEEEEE
Confidence 777789999999999999999999999998763
No 7
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=8.3e-32 Score=301.99 Aligned_cols=447 Identities=13% Similarity=0.014 Sum_probs=286.0
Q ss_pred eEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc--ccccccceEEecCCcEEEEEecCCCCCCC
Q 007140 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC--LNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (616)
Q Consensus 36 ~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~--~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (616)
+..+|||++|+|.+.... .....||+++..+++.++|+...... -...+..+.|||||++|+|....
T Consensus 73 ~~p~~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~------ 141 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHKD-----KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP------ 141 (695)
T ss_dssp CCCEEETTEEEEEEECTT-----CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE------
T ss_pred CCCEEECCEEEEEEEcCC-----CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC------
Confidence 344599999999987521 22578999999888888887542210 01125689999999999996321
Q ss_pred CCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee---ecCCCCceeeeeECCCCcEE
Q 007140 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 114 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~---~l~~~~~~~~~~~SpDg~~i 189 (616)
.|. ...+|+++|+ +|+.. .+... ....++|||||+.|
T Consensus 142 ---------------~G~-----------------------~~~~i~v~dl~tg~~~~~~~~~~~-~~~~~~wspDg~~l 182 (695)
T 2bkl_A 142 ---------------NAA-----------------------DEAVLHVIDVDSGEWSKVDVIEGG-KYATPKWTPDSKGF 182 (695)
T ss_dssp ---------------TTC-----------------------SCCEEEEEETTTCCBCSSCCBSCC-TTCCCEECTTSSEE
T ss_pred ---------------CCC-----------------------ceEEEEEEECCCCCCcCCcccCcc-cccceEEecCCCEE
Confidence 010 1358999999 56654 22222 12579999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCce--EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
+|++.+..............+|+++++.+++ .+.+...+... .....+.|||||+. |++.....
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~~~--- 248 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP----------TTFLQSDLSRDGKY-LFVYILRG--- 248 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT----------TCEEEEEECTTSCC-EEEEEEET---
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC----------EEEEEEEECCCCCE-EEEEEeCC---
Confidence 9998653210000001124579999998664 23443311000 01125789999985 55543211
Q ss_pred cccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCC-CceEEeeccc
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRVF 346 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~~~ 346 (616)
.....+++++. .+++.+.|.........+.| +||. |++....+....+|+++++++++. ..+.|+....
T Consensus 249 -----~~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 249 -----WSENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp -----TTEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS
T ss_pred -----CCceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC
Confidence 02346777665 55677777654444445556 6777 666554333456899999987421 0144442211
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEee
Q 007140 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (616)
Q Consensus 347 ~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (616)
...+. .++|+ + ..+++....++ ...|+ .++++++..+.|.. ... ..+.
T Consensus 319 ~~~l~-----~~~~~-~-~~lv~~~~~dg--~~~l~----------------~~~~~g~~~~~l~~-~~~---~~v~--- 366 (695)
T 2bkl_A 319 SASLL-----SVSIV-G-GHLSLEYLKDA--TSEVR----------------VATLKGKPVRTVQL-PGV---GAAS--- 366 (695)
T ss_dssp SCEEE-----EEEEE-T-TEEEEEEEETT--EEEEE----------------EEETTCCEEEECCC-SSS---SEEC---
T ss_pred CCeEE-----EEEEE-C-CEEEEEEEECC--EEEEE----------------EEeCCCCeeEEecC-CCC---eEEE---
Confidence 11010 15666 3 44555544332 22333 35554333333311 100 0111
Q ss_pred cCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcccCCceeEEEEECCCCcEEEEEEEcCCCCC
Q 007140 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYD 506 (616)
Q Consensus 427 ~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~~~~~~e~i~~~~~DG~~l~g~l~~P~~~~ 506 (616)
..+++++++.+++.+++...|+.||++++.+++.+.|+..+.. .......++.+.+++.||.+|+++|++|++++
T Consensus 367 ----~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~ 441 (695)
T 2bkl_A 367 ----NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLK 441 (695)
T ss_dssp ----CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCC
T ss_pred ----EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCC
Confidence 1356788899999999999999999999999888888765432 23333489999999999999999999999987
Q ss_pred CCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC---ChhHHHH
Q 007140 507 QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRFVEQL 582 (616)
Q Consensus 507 ~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~ 582 (616)
+++++ |+||++|+++. ......| . ...+.|+++||+|+. |+| |+.+||.+|.. ..++...
T Consensus 442 ~~~~~--p~vl~~hGg~~---------~~~~~~~---~-~~~~~l~~~G~~v~~~d~r-G~g~~g~~~~~~~~~~~~~~~ 505 (695)
T 2bkl_A 442 RDGNA--PTLLYGYGGFN---------VNMEANF---R-SSILPWLDAGGVYAVANLR-GGGEYGKAWHDAGRLDKKQNV 505 (695)
T ss_dssp CSSCC--CEEEECCCCTT---------CCCCCCC---C-GGGHHHHHTTCEEEEECCT-TSSTTCHHHHHTTSGGGTHHH
T ss_pred CCCCc--cEEEEECCCCc---------cccCCCc---C-HHHHHHHhCCCEEEEEecC-CCCCcCHHHHHhhHhhcCCCc
Confidence 65544 99999954321 0000122 2 445789999999999 999 99999999864 5677889
Q ss_pred HHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 583 VSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 583 ~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
++|+++++++|++++++|++||+|.+.
T Consensus 506 ~~D~~~~~~~l~~~~~~~~~~i~i~G~ 532 (695)
T 2bkl_A 506 FDDFHAAAEYLVQQKYTQPKRLAIYGG 532 (695)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEEE
Confidence 999999999999999999999999874
No 8
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=1e-32 Score=303.26 Aligned_cols=400 Identities=13% Similarity=0.051 Sum_probs=277.7
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
+...+|||||++|||.+.. ++..+||.+ ++|+.+++|...... +..+.|||| + ++|+....
T Consensus 24 ~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~~----~~~~~~spd-~-~l~~~~~~---- 84 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPINS----VLDPHYGVG-R-VILVRDVS---- 84 (582)
T ss_dssp EEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCSE----ECEECTTCS-E-EEEEEECS----
T ss_pred hheeecCCCCCeEEEEEcc-------CCceeEEEE--cCCCcEeeecccccc----cccccCCCC-e-EEEEeccC----
Confidence 6688999999999999875 456788876 688999998665322 568899999 4 66643210
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC--CCCeeecCCCCceeeeeECCCCcEEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYVL 190 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~--~g~~~~l~~~~~~~~~~~SpDg~~i~ 190 (616)
.+ + ...+||.+++ +|...+++........+|||||+.++
T Consensus 85 ----------------~g----------------~-------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 85 ----------------KG----------------A-------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp ----------------TT----------------S-------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEE
T ss_pred ----------------CC----------------C-------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEE
Confidence 01 0 1347899999 77666776654445679999999988
Q ss_pred EEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCccc
Q 007140 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (616)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~ 270 (616)
+.+... ..+.+||+++++.+.++..+ ...+.|||||+. |++.....+
T Consensus 126 ~~s~~~------------~~~~l~d~~~g~~~~l~~~~---------------~~~~~~spDG~~-la~~~~~~~----- 172 (582)
T 3o4h_A 126 FTGATE------------DRVALYALDGGGLRELARLP---------------GFGFVSDIRGDL-IAGLGFFGG----- 172 (582)
T ss_dssp EEEECS------------SCEEEEEEETTEEEEEEEES---------------SCEEEEEEETTE-EEEEEEEET-----
T ss_pred EEecCC------------CCceEEEccCCcEEEeecCC---------------CceEEECCCCCE-EEEEEEcCC-----
Confidence 876543 24558899888877776521 135889999984 555422111
Q ss_pred ccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeec--cccc
Q 007140 271 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR--VFEN 348 (616)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~ 348 (616)
....++++++ .+|+.+.|+........+.|||||+.|+... ..+..+||++|++++ +.+.+... .+..
T Consensus 173 ---~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~--~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~ 242 (582)
T 3o4h_A 173 ---GRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTAGLE--TAREARLVTVDPRDG--SVEDLELPSKDFSS 242 (582)
T ss_dssp ---TEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEEEEE--CSSCEEEEEECTTTC--CEEECCCSCSHHHH
T ss_pred ---CCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEEEcc--CCCeeEEEEEcCCCC--cEEEccCCCcChhh
Confidence 1135888887 7788888877666678899999999877332 234568999999984 44432221 1222
Q ss_pred ccCCCCCCCee--------eCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccce
Q 007140 349 VYSDPGSPMMT--------RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (616)
Q Consensus 349 ~~~~~g~~~~~--------~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (616)
+. |+||| .+++....++ ...+| ++ |+..+.. ..
T Consensus 243 ---------~~~~~~~~~~~spdg-~~~~~~~~~g--~~~l~------------------~~--g~~~~~~-------~~ 283 (582)
T 3o4h_A 243 ---------YRPTAITWLGYLPDG-RLAVVARREG--RSAVF------------------ID--GERVEAP-------QG 283 (582)
T ss_dssp ---------HCCSEEEEEEECTTS-CEEEEEEETT--EEEEE------------------ET--TEEECCC-------SS
T ss_pred ---------hhhccccceeEcCCC-cEEEEEEcCC--cEEEE------------------EE--CCeeccC-------CC
Confidence 45 99999 5666654332 33444 22 3322210 01
Q ss_pred eeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcc---cCC-ceeEEEEECCCCcEEE
Q 007140 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTL---ASL-QKEMIKYQRKDGVPLT 496 (616)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~---~~~-~~e~i~~~~~DG~~l~ 496 (616)
.+.. ..++ + +.+++..++...|+++|++++.+ +.++| .... ..+ ..+.+++++.||.+++
T Consensus 284 ~v~~-------~~~s-d-g~~l~~~s~~~~p~~l~~~d~~~-~~~~l------~~~~~~~~~~~~~~~~~~~~~~g~~i~ 347 (582)
T 3o4h_A 284 NHGR-------VVLW-R-GKLVTSHTSLSTPPRIVSLPSGE-PLLEG------GLPEDLRRSIAGSRLVWVESFDGSRVP 347 (582)
T ss_dssp EEEE-------EEEE-T-TEEEEEEEETTEEEEEEEETTCC-EEECC------CCCHHHHHTEEEEEEEEEECTTSCEEE
T ss_pred ceEE-------EEec-C-CEEEEEEcCCCCCCeEEEEcCCC-ceEEE------ecCCccccccCcceEEEEECCCCCEEE
Confidence 1111 2456 5 45678888999999999999765 55555 1122 334 8899999999999999
Q ss_pred EEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC
Q 007140 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN 575 (616)
Q Consensus 497 g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~ 575 (616)
+++++|+++++ +.|+||++|++.. ......| . ...+.|+++||+|+. |+| |+.|||+.|..
T Consensus 348 ~~~~~p~~~~~----~~p~vv~~HG~~~---------~~~~~~~---~-~~~~~l~~~G~~v~~~d~r-G~~~~G~s~~~ 409 (582)
T 3o4h_A 348 TYVLESGRAPT----PGPTVVLVHGGPF---------AEDSDSW---D-TFAASLAAAGFHVVMPNYR-GSTGYGEEWRL 409 (582)
T ss_dssp EEEEEETTSCS----SEEEEEEECSSSS---------CCCCSSC---C-HHHHHHHHTTCEEEEECCT-TCSSSCHHHHH
T ss_pred EEEEcCCCCCC----CCcEEEEECCCcc---------ccccccc---C-HHHHHHHhCCCEEEEeccC-CCCCCchhHHh
Confidence 99999998765 3489999844211 0001122 2 567899999999999 999 99999999874
Q ss_pred ---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 576 ---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 576 ---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..++...++|+.+++++|++++.+| ||+|.+
T Consensus 410 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G 443 (582)
T 3o4h_A 410 KIIGDPCGGELEDVSAAARWARESGLAS--ELYIMG 443 (582)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEE
T ss_pred hhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEE
Confidence 6778889999999999999999999 898876
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=1.8e-31 Score=300.07 Aligned_cols=452 Identities=10% Similarity=0.042 Sum_probs=286.1
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc--cccccceEEecCCcEEEEEecCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~--~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
++.| +|||++++|.++... .....||+++..+++.+.|+....... ...+..+.|||||++|+|....
T Consensus 76 ~~~p--~~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~--- 145 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTGL-----QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA--- 145 (710)
T ss_dssp ECCC--EEETTEEEEEEECSS-----CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE---
T ss_pred CCCC--EEECCEEEEEEEcCC-----ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC---
Confidence 4555 399999999987521 224589999988887776643321000 1125689999999999996321
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCC-ceeeeeECCCCcE
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA-VYTAVEPSPDQKY 188 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~-~~~~~~~SpDg~~ 188 (616)
.|. ...+|+++|+ +|+..+++... ....++|||||+.
T Consensus 146 ------------------~G~-----------------------~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~ 184 (710)
T 2xdw_A 146 ------------------SGS-----------------------DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKG 184 (710)
T ss_dssp ------------------TTC-----------------------SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSE
T ss_pred ------------------CCC-----------------------ceEEEEEEECCCCCCCcccccCcccceEEEEeCCCE
Confidence 010 1248999999 66666543222 2457999999999
Q ss_pred EEEEeccCCCc---ccccCcccCccEEEEeCCCceE--EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEee
Q 007140 189 VLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (616)
Q Consensus 189 i~~~~~~~~~~---~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (616)
|+|++...+.. ..........+|+++++.+++. ..+...+... .....+.|||||+. |++....
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~----------~~~~~~~~SpDg~~-l~~~~~~ 253 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP----------KWMGGAELSDDGRY-VLLSIRE 253 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT----------TCEEEEEECTTSCE-EEEEEEC
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC----------eEEEEEEEcCCCCE-EEEEEEc
Confidence 99998654310 0000011245799999976542 2332211000 00125789999985 5554221
Q ss_pred cCCCcccccCCCceeEeccCCCCCC------C--CceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCC
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEG------E--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~------g--~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (616)
. . .....++++++ .+ + +.+.|....... ...|+|||..|++....+....+|+++++++++
T Consensus 254 ~-~------~~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 254 G-C------DPVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp S-S------SSCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred c-C------CCccEEEEEEC---cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 1 0 11346777776 43 3 355565433222 346999998877665443345689999998742
Q ss_pred C-CceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCc-eeeeeec
Q 007140 336 V-APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-KERIWES 413 (616)
Q Consensus 336 ~-~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~-~~~l~~~ 413 (616)
. ..+.|+...-...+. .+.|+++ ..+++.....+ ...|+ .+++.+|+ .+.|...
T Consensus 323 ~~~~~~l~~~~~~~~~~-----~~~~~~~-~~lv~~~~~~g--~~~l~----------------~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 323 ESKWKVLVPEHEKDVLE-----WVACVRS-NFLVLCYLHDV--KNTLQ----------------LHDLATGALLKIFPLE 378 (710)
T ss_dssp GGGCEEEECCCSSCEEE-----EEEEETT-TEEEEEEEETT--EEEEE----------------EEETTTCCEEEEECCC
T ss_pred cccceeccCCCCCCeEE-----EEEEEcC-CEEEEEEEECC--EEEEE----------------EEECCCCCEEEecCCC
Confidence 1 124454221100111 1677754 45555554332 22333 46775565 3334211
Q ss_pred CCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCc--eeeeeeCCCCCCcccCCceeEEEEECCC
Q 007140 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQRKD 491 (616)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~--~~~Lt~~~~~~~~~~~~~~e~i~~~~~D 491 (616)
. ..+.. ..++++++.+++..++.++|+.+|++++.+++ .+.|.....+.........+.+.+++.|
T Consensus 379 ~-----~~v~~-------~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d 446 (710)
T 2xdw_A 379 V-----GSVVG-------YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKD 446 (710)
T ss_dssp S-----SEEEE-------EECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTT
T ss_pred C-----ceEEE-------EecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCC
Confidence 1 11111 24677888999999999999999999999888 6666654322123333588999999999
Q ss_pred CcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEEE-CCCCCcccc
Q 007140 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA-GPSIPIIGE 569 (616)
Q Consensus 492 G~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl~-n~R~GS~Gy 569 (616)
|.+|+++|++|+++++++++ |+||++|+++. ....+.| . ...+.|++ +||+|+. |+| |+.+|
T Consensus 447 g~~i~~~~~~p~~~~~~~~~--P~vl~~hGg~~---------~~~~~~~---~-~~~~~l~~~~G~~v~~~d~r-G~g~~ 510 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLDGSH--PAFLYGYGGFN---------ISITPNY---S-VSRLIFVRHMGGVLAVANIR-GGGEY 510 (710)
T ss_dssp SCEEEEEEEEETTCCCSSCS--CEEEECCCCTT---------CCCCCCC---C-HHHHHHHHHHCCEEEEECCT-TSSTT
T ss_pred CCEEEEEEEecCCCCCCCCc--cEEEEEcCCCC---------CcCCCcc---c-HHHHHHHHhCCcEEEEEccC-CCCCC
Confidence 99999999999998765544 89999954321 0000122 1 33567888 9999999 999 99999
Q ss_pred CCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 570 GDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 570 G~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
|..|.. ..++...++|+++++++|++++++|++||+|.+.
T Consensus 511 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~ 553 (710)
T 2xdw_A 511 GETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGG 553 (710)
T ss_dssp HHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEE
T ss_pred ChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEE
Confidence 999874 5677889999999999999999999999999874
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.3e-30 Score=291.66 Aligned_cols=397 Identities=13% Similarity=0.053 Sum_probs=258.8
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
+..++|||||++|||...... +....|+++|+++|+..+.+.. .. ....+.|| ||+.|+|........
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G-----~~~~~i~v~dl~tg~~~~~~~~-~~----k~~~~~Ws-Dg~~l~y~~~~~~~~- 198 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAG-----SDWREIHLMDVESKQPLETPLK-DV----KFSGISWL-GNEGFFYSSYDKPDG- 198 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSS-----CCEEEEEEEETTTCSEEEEEEE-EE----ESCCCEEE-TTTEEEEEESSCCC--
T ss_pred EEEEEECCCCCEEEEEEecCC-----CceEEEEEEECCCCCCCccccC-Cc----eeccEEEe-CCCEEEEEEecCccc-
Confidence 567899999999999987521 3347999999999987665321 11 13678999 999999975431100
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC--CeeecCCC-C----ceeeeeECC
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP-A----VYTAVEPSP 184 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g--~~~~l~~~-~----~~~~~~~Sp 184 (616)
+. ..+ .....+||+.++ ++ +.+.+... . ....+.|||
T Consensus 199 -----------------~~------~~~------------~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp 243 (693)
T 3iuj_A 199 -----------------SE------LSA------------RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE 243 (693)
T ss_dssp -----------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT
T ss_pred -----------------cc------ccc------------cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC
Confidence 00 000 002457899888 44 23444322 1 345789999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
||++|++....... ..+||++|++++.
T Consensus 244 Dg~~l~~~~~~~~~---------~~~i~~~d~~~~~-------------------------------------------- 270 (693)
T 3iuj_A 244 DDRFLLISAANSTS---------GNRLYVKDLSQEN-------------------------------------------- 270 (693)
T ss_dssp TSCEEEEEEESSSS---------CCEEEEEETTSTT--------------------------------------------
T ss_pred CCCEEEEEEccCCC---------CcEEEEEECCCCC--------------------------------------------
Confidence 99999998654321 2356666654321
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCC-CceEEee
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFD 343 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~ 343 (616)
++.+.|.........+ |+++|..|++..+.+....+|+.+++++++. ..+.|+.
T Consensus 271 ------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 271 ------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP 325 (693)
T ss_dssp ------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec
Confidence 0111111111111112 5666665555443333345899999987421 1134432
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeE
Q 007140 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (616)
Q Consensus 344 ~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (616)
.... . +.|+++|+.|++.....+ ...|+ .++++++..+.|.... . ..+.
T Consensus 326 ~~~~--------~-~~~s~~g~~lv~~~~~~g--~~~l~----------------~~d~~g~~~~~l~~p~-~---~~~~ 374 (693)
T 3iuj_A 326 ERQQ--------V-LTVHSGSGYLFAEYMVDA--TARVE----------------QFDYEGKRVREVALPG-L---GSVS 374 (693)
T ss_dssp CCSS--------C-EEEEEETTEEEEEEEETT--EEEEE----------------EECTTSCEEEEECCSS-S---SEEE
T ss_pred CCCC--------E-EEEEEECCEEEEEEEECC--eeEEE----------------EEECCCCeeEEeecCC-C---ceEE
Confidence 2111 1 378888998887765432 12233 4566655444442111 0 1111
Q ss_pred EeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcccCCceeEEEEECCCCcEEEEEEEcCC
Q 007140 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 503 (616)
Q Consensus 424 ~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~~~~~~e~i~~~~~DG~~l~g~l~~P~ 503 (616)
. .+++++++.+++..++..+|+.+|.+++++++.+.|+..+.. .......++.+.+++.||.+|+++|++|+
T Consensus 375 ~-------~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~l~~p~ 446 (693)
T 3iuj_A 375 G-------FNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAP-FKPEDYVSEQRFYQSKDGTRVPLIISYRK 446 (693)
T ss_dssp E-------CCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSS-CCGGGEEEEEEEEECTTSCEEEEEEEEES
T ss_pred e-------eecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCC-cChhhCeeEEEEEecCCCcEEEEEEEecC
Confidence 1 245678889999999999999999999998888888776433 33333588999999999999999999999
Q ss_pred CCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC---ChhH
Q 007140 504 GYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRFV 579 (616)
Q Consensus 504 ~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g 579 (616)
+++++++ .|+||++|+++. ......| . ...+.|+++||+|+. |+| |+.+||.+|.. ..++
T Consensus 447 ~~~~~~~--~P~ll~~hGg~~---------~~~~~~~---~-~~~~~l~~~G~~v~~~d~R-G~g~~g~~~~~~~~~~~~ 510 (693)
T 3iuj_A 447 GLKLDGS--NPTILYGYGGFD---------VSLTPSF---S-VSVANWLDLGGVYAVANLR-GGGEYGQAWHLAGTQQNK 510 (693)
T ss_dssp SCCCSSC--CCEEEECCCCTT---------CCCCCCC---C-HHHHHHHHTTCEEEEECCT-TSSTTCHHHHHTTSGGGT
T ss_pred CCCCCCC--ccEEEEECCCCC---------cCCCCcc---C-HHHHHHHHCCCEEEEEeCC-CCCccCHHHHHhhhhhcC
Confidence 9876544 499999965320 1111122 2 446789999999999 999 99999999875 5777
Q ss_pred HHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 580 EQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 580 ~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
...++|++++++||++++++|++||+|.+.
T Consensus 511 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~ 540 (693)
T 3iuj_A 511 QNVFDDFIAAAEYLKAEGYTRTDRLAIRGG 540 (693)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCGGGEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCCcceEEEEEE
Confidence 889999999999999999999999999874
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=8.8e-30 Score=287.54 Aligned_cols=445 Identities=12% Similarity=0.049 Sum_probs=279.2
Q ss_pred EEccCCCeEEEEEeeccccccCCCceeEEEEECC---CCceEecccCCCccc--cccccceEEecCCcEEEEEecCCCCC
Q 007140 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPDICL--NAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 37 ~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~---~g~~~~lt~~~~~~~--~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
..+|||++++|.++... .....||+++.. +++.++|+....... ...+..+.|||||++|+|....
T Consensus 113 ~p~pdG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~---- 183 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGL-----MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD---- 183 (741)
T ss_dssp CCEEETTEEEEEEECSS-----CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEE----
T ss_pred CCEEECCEEEEEEEcCC-----CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC----
Confidence 44599999999987521 225789999987 777777643321000 0125689999999999996321
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCC-ceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA-VYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~-~~~~~~~SpDg~~i 189 (616)
.|. ...+|+++|+ +|+........ ....++|||| +.|
T Consensus 184 -----------------~G~-----------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 184 -----------------GGS-----------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp -----------------TTC-----------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEE
T ss_pred -----------------CCC-----------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEE
Confidence 010 1257999999 56665542222 2257899999 999
Q ss_pred EEEeccCCCc-ccccCcccCccEEEEeCCCce--EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 190 LITSMHRPYS-YKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 190 ~~~~~~~~~~-~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
+|++...+.. ..........+|+++++.++. .+.+...+.. + .....+.|||||+. |++... +..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~---~-------~~~~~~~~SpDG~~-l~~~~~-~~~ 290 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL---P-------KRGHGASVSSDGRW-VVITSS-EGT 290 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC---T-------TCEEEEEECTTSCE-EEEEEE-CTT
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC---C-------eEEEEEEECCCCCE-EEEEEE-ccC
Confidence 9998654310 000001124579999987554 2333321100 0 00235789999985 555422 110
Q ss_pred CcccccCCCceeEeccCCCCCCC--C-ceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee
Q 007140 267 DANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~g--~-~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 343 (616)
.....++++++ +++ + .+.|.........+ |+|||..|++..+......+|++++++++..+.+.++.
T Consensus 291 ------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 291 ------DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ------CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred ------CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 12356787787 655 5 66665433222333 55898887766544434568999999873102244432
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeE
Q 007140 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (616)
Q Consensus 344 ~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (616)
.... ... .+.|+ ++.+++....++ ...|+ .++++++..+.|.... ...+.
T Consensus 361 ~~~~-~l~-----~~~~~--~~~lv~~~~~dg--~~~l~----------------~~~~~g~~~~~l~~~~----~~~v~ 410 (741)
T 1yr2_A 361 ESKD-NLE-----SVGIA--GNRLFASYIHDA--KSQVL----------------AFDLDGKPAGAVSLPG----IGSAS 410 (741)
T ss_dssp CCSS-EEE-----EEEEE--BTEEEEEEEETT--EEEEE----------------EEETTSCEEEECBCSS----SCEEE
T ss_pred CCCC-eEE-----EEEEE--CCEEEEEEEECC--EEEEE----------------EEeCCCCceeeccCCC----CeEEE
Confidence 2111 110 14555 445666554332 22333 4565443334342110 01111
Q ss_pred EeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcccCCceeEEEEECCCCcEEEEEEEcCC
Q 007140 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 503 (616)
Q Consensus 424 ~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~~~~~~e~i~~~~~DG~~l~g~l~~P~ 503 (616)
. .+++++++.+++.+++..+|+++|++++.+++.+.|+.. ..........++.+.+++.||.+|+++|++|.
T Consensus 411 ~-------~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~-~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~ 482 (741)
T 1yr2_A 411 G-------LSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPV-HLTFDPADFRVEQVFYPSKDGTKVPMFIVRRK 482 (741)
T ss_dssp E-------EECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCC-CCSSCGGGEEEEEEEEECTTSCEEEEEEEEET
T ss_pred E-------eecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecC-CCCCChhHCEEEEEEEEcCCCCEEEEEEEecC
Confidence 1 246778889999999999999999999998887666553 22223333488999999999999999999999
Q ss_pred CCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC---ChhH
Q 007140 504 GYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRFV 579 (616)
Q Consensus 504 ~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g 579 (616)
++ . + +.|+||++|+++. ......| . ...+.|+++||+|+. |+| |+.++|..|.. ..++
T Consensus 483 ~~-~-~--~~p~vl~~hGg~~---------~~~~~~~---~-~~~~~l~~~G~~v~~~d~r-G~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 483 DA-K-G--PLPTLLYGYGGFN---------VALTPWF---S-AGFMTWIDSGGAFALANLR-GGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp TC-C-S--CCCEEEECCCCTT---------CCCCCCC---C-HHHHHHHTTTCEEEEECCT-TSSTTHHHHHHTTSGGGT
T ss_pred CC-C-C--CCcEEEEECCCCC---------ccCCCCc---C-HHHHHHHHCCcEEEEEecC-CCCCCCHHHHHhhhhhcC
Confidence 87 2 2 3499999954321 0000122 1 456789999999999 999 99999999874 5677
Q ss_pred HHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 580 EQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 580 ~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
...++|+++++++|++++++|++||+|.+.
T Consensus 545 ~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~ 574 (741)
T 1yr2_A 545 QNVFDDFIAAGEWLIANGVTPRHGLAIEGG 574 (741)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTCEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHEEEEEE
Confidence 889999999999999999999999999874
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=1.2e-29 Score=285.58 Aligned_cols=391 Identities=13% Similarity=0.065 Sum_probs=246.8
Q ss_pred ccceEEc-cCCCeEEEEEeeccccccCCCceeEEEEECCCC-ceEecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 33 INFVSWS-PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 33 ~~~~~~S-PDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g-~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
...++|| |||++|||+...+. +...+||++++++| +. ++. .+......+.|||||+.|+|+..+..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G-----~~~~~l~v~dl~~g~~~--l~~----~~~~~~~~~~WspDg~~l~y~~~d~~- 243 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSG-----NEVYTIEFKRISDPSQT--IAD----KVSGTNGEIVWGPDHTSLFYVTKDET- 243 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSS-----SSCEEEEEEETTCTTCC--CCC----CEEEECSCCEECSSTTEEEEEEECTT-
T ss_pred EeeeEecCCCCCEEEEEEeCCC-----CceEEEEEEECCCCCEe--CCc----cccCceeeEEEecCCCEEEEEEECCC-
Confidence 5679999 99999999987521 23467999999998 62 221 11112468999999999999732100
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC--eeec---CCCCceeeeeECC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDF---GTPAVYTAVEPSP 184 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~--~~~l---~~~~~~~~~~~Sp 184 (616)
+ ...+||++++ +++ .+.+ ........+.|||
T Consensus 244 -------------------~------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 244 -------------------L------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp -------------------C------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred -------------------C------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 0 1247888888 443 2233 2223456789999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCc--eE--EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEE
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
||++|++...... ..+||++|++++ +. +.++.. .....|+
T Consensus 281 Dg~~l~~~~~~~~----------~~~l~~~d~~~~~~~~~~~~l~~~----------------~~~~~~s---------- 324 (751)
T 2xe4_A 281 DTNTLCIGSQSPE----------TAEVHLLDLRKGNAHNTLEIVRPR----------------EKGVRYD---------- 324 (751)
T ss_dssp TSSEEEEEEECSS----------CEEEEEEESSSCTTCCCEEESSCC----------------CTTCCEE----------
T ss_pred CCCEEEEEecCCC----------CceEEEEECCCCCCCceeEEeecC----------------CCCceEE----------
Confidence 9999999975321 346666666543 11 221110 0001111
Q ss_pred EeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeecc-CccEEEEEEeCCCCCCCce
Q 007140 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 261 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~-~~~~~l~~~d~~~~~~~~~ 339 (616)
+.|. +|..|++..+.+ ....+||.++++++ ++.+
T Consensus 325 -------------------------------------------~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~ 359 (751)
T 2xe4_A 325 -------------------------------------------VQMH-GTSHLVILTNEGGAVNHKLLIAPRGQP-SDWS 359 (751)
T ss_dssp -------------------------------------------EEEE-TTTEEEEEECTTTCTTCEEEEEETTST-TCCC
T ss_pred -------------------------------------------Eeee-eCCEEEEEeCCCCCCCcEEEEEcCCCc-ccce
Confidence 1121 144444433332 24458999988752 1223
Q ss_pred E-EeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeec-------CCCc-eeee
Q 007140 340 V-LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI-------NTGS-KERI 410 (616)
Q Consensus 340 ~-l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~-------~~g~-~~~l 410 (616)
. |+........ ..++.+++.|++.....+ ...|+ .+++ ++++ .++|
T Consensus 360 ~~li~~~~~~~l-------~~~~~~~~~lv~~~~~~g--~~~l~----------------~~dl~~~~~~~~~g~~~~~l 414 (751)
T 2xe4_A 360 HVLVDHSEDVFM-------ESIAVRSNYLVVAGRRAG--LTRIW----------------TMMADSQDGVFKAGTGLREV 414 (751)
T ss_dssp CEEECCCSSEEE-------EEEEECSSEEEEEEEETT--EEEEE----------------EEECCTTTSCCCTTTCCEEC
T ss_pred eeEECCCCCcEE-------EEEEEECCEEEEEEEeCC--EEEEE----------------EEecccccccccCCccceEE
Confidence 2 3221111000 123334667777665432 22333 3454 4454 4544
Q ss_pred eecCCcccceeeEEeecCCCcccc--cccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCC-CCcccCCceeEEEE
Q 007140 411 WESNREKYFETAVALVFGQGEEDI--NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP-YPTLASLQKEMIKY 487 (616)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~--s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~-~~~~~~~~~e~i~~ 487 (616)
.-.. . . ....+. ... +.+++.+++.+++.+.|+++|.+++.+++.+.|+..+.+ ......+.++.+++
T Consensus 415 ~l~~-~-~--~~~~~~-----~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 485 (751)
T 2xe4_A 415 VMEE-P-I--FTVHLV-----ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYKVERRFA 485 (751)
T ss_dssp CCCC-S-S--CEEEEC-----GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGGEEEEEEEE
T ss_pred CCCC-c-e--eEEEec-----cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccceEEEEEEE
Confidence 2111 0 0 011110 011 457788999999999999999999998888888865432 22333347899999
Q ss_pred ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCc
Q 007140 488 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPI 566 (616)
Q Consensus 488 ~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS 566 (616)
++.||.+|+++|++|+++++++++ |+||++|+++. ......| . ...+.|+++||+|+. |+| |+
T Consensus 486 ~s~dG~~i~~~l~~p~~~~~~~~~--P~vl~~HGg~~---------~~~~~~~---~-~~~~~l~~~G~~v~~~d~R-G~ 549 (751)
T 2xe4_A 486 TAPDQTKIPLSVVYHKDLDMSQPQ--PCMLYGYGSYG---------LSMDPQF---S-IQHLPYCDRGMIFAIAHIR-GG 549 (751)
T ss_dssp ECTTCCEEEEEEEEETTSCTTSCC--CEEEECCCCTT---------CCCCCCC---C-GGGHHHHTTTCEEEEECCT-TS
T ss_pred ECCCCcEEEEEEEcCCCCCCCCCc--cEEEEECCCCC---------cCCCCcc---h-HHHHHHHhCCcEEEEEeeC-CC
Confidence 999999999999999998765555 89999954321 0001123 2 456899999999999 999 99
Q ss_pred cccCCCccC----ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 567 IGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 567 ~GyG~~f~~----~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
.+||++|.. ..++...++|+++++++|++++++|++||+|.+.
T Consensus 550 g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~ 596 (751)
T 2xe4_A 550 SELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGR 596 (751)
T ss_dssp CTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEE
T ss_pred CCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEE
Confidence 999999853 5678889999999999999999999999999874
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=99.91 E-value=6.6e-21 Score=209.83 Aligned_cols=159 Identities=12% Similarity=-0.010 Sum_probs=129.0
Q ss_pred ccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCCCcccCCceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCC
Q 007140 434 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPL 513 (616)
Q Consensus 434 ~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~~~~~~~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~ 513 (616)
.+++++.+++..++...|+++|.+++. ++.++|+..+.. .....+.+|.+++++.||.+|+++|++|+++++++++
T Consensus 403 ~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~-~~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~-- 478 (711)
T 4hvt_A 403 SYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALYS-FDSENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKN-- 478 (711)
T ss_dssp CCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSSC-CCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCC--
T ss_pred ecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCcc-cCcccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCc--
Confidence 456778899999999999999999988 788888876432 3333458899999999999999999999998776555
Q ss_pred cEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC---ChhHHHHHHHHHHH
Q 007140 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 589 (616)
Q Consensus 514 P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~ 589 (616)
|+||++|+++. ......| .....|.|+++||+|+. |+| |+.|||.+|.. ..++..+++|++++
T Consensus 479 P~vl~~HGG~~---------~~~~~~~---~~~~~q~la~~Gy~Vv~~d~R-Gsg~~G~~~~~~~~~~~~~~~~~D~~aa 545 (711)
T 4hvt_A 479 PTLLEAYGGFQ---------VINAPYF---SRIKNEVWVKNAGVSVLANIR-GGGEFGPEWHKSAQGIKRQTAFNDFFAV 545 (711)
T ss_dssp CEEEECCCCTT---------CCCCCCC---CHHHHHHTGGGTCEEEEECCT-TSSTTCHHHHHTTSGGGTHHHHHHHHHH
T ss_pred cEEEEECCCCC---------CCCCCcc---cHHHHHHHHHCCCEEEEEeCC-CCCCcchhHHHhhhhccCcCcHHHHHHH
Confidence 99999965321 0001122 11223689999999999 999 99999999975 78899999999999
Q ss_pred HHHHHHcCCccCCceEEEee
Q 007140 590 VEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 590 v~~l~~~~~vD~~ri~~~~~ 609 (616)
++||++++++|++||+|.+.
T Consensus 546 v~~L~~~~~~d~~rI~i~G~ 565 (711)
T 4hvt_A 546 SEELIKQNITSPEYLGIKGG 565 (711)
T ss_dssp HHHHHHTTSCCGGGEEEEEE
T ss_pred HHHHHHcCCCCcccEEEEeE
Confidence 99999999999999999874
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=6.1e-20 Score=190.27 Aligned_cols=343 Identities=11% Similarity=0.074 Sum_probs=199.6
Q ss_pred CCCceeeecCCCCC---cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEE
Q 007140 18 LGPEKEVHGYPDGA---KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW 94 (616)
Q Consensus 18 ~g~~~~lt~~~~~~---~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~w 94 (616)
+++.++||..+... ...+|+|||||++|+|.+.. ++..+||++++++|+.++++...... ...+.|
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------~g~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~ 88 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF-------DGPWNYYLLDLNTQVATQLTEGRGDN----TFGGFL 88 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTCEEEECCCSSCBC----SSSCEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC-------CCCceEEEEeCCCCceEEeeeCCCCC----ccceEE
Confidence 45677777433221 12349999999999999864 45679999999999999998654321 226789
Q ss_pred ecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCC
Q 007140 95 VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT 173 (616)
Q Consensus 95 spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~ 173 (616)
||||+.|+|... ...|+++|+ +++.+.+..
T Consensus 89 spdg~~l~~~~~-------------------------------------------------~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 89 SPDDDALFYVKD-------------------------------------------------GRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CTTSSEEEEEET-------------------------------------------------TTEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEEeC-------------------------------------------------CCeEEEEECCCCcceeeee
Confidence 999999999621 136888888 566665532
Q ss_pred C--Ccee--eeeECCCCcEEEEEeccCC-Cccccc-------C-cccCccEEEEeCCCceEEEecCCCCCCCCCccccCc
Q 007140 174 P--AVYT--AVEPSPDQKYVLITSMHRP-YSYKVP-------C-ARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (616)
Q Consensus 174 ~--~~~~--~~~~SpDg~~i~~~~~~~~-~~~~~~-------~-~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (616)
. .... ...++|||+.++....... +..... + ......|+++|+.+++.+.++..+.
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----------- 188 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ----------- 188 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-----------
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-----------
Confidence 2 2222 2345999999886543211 000000 0 0123589999999887777754210
Q ss_pred cCCCCcceeec-CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc--ccccceeecCCCceEEEee
Q 007140 241 REGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNET 317 (616)
Q Consensus 241 ~~~~~~~~wsp-dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~--~~~~~~~wspDg~~l~~~~ 317 (616)
....+.||| ||+. |+++.. ... ......+++++. ++++.+.+.... .....+.|||||+.|++..
T Consensus 189 --~~~~~~~sp~dg~~-l~~~~~-~~~-----~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 189 --WLGHPIYRPYDDST-VAFCHE-GPH-----DLVDARMWLINE---DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp --CEEEEEEETTEEEE-EEEEEC-SCT-----TTSSCSEEEEET---TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred --cccccEECCCCCCE-EEEEEe-cCC-----CCCcceEEEEeC---CCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 023588999 9974 666632 110 011346777777 666777776544 2356789999999876654
Q ss_pred eccCc-cEEEEEEeCCCCCCCceEEeeccc-ccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcc
Q 007140 318 WYKTS-QTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (616)
Q Consensus 318 ~~~~~-~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~ 395 (616)
..... ...||++|++++ +.+.+..... ......+. ...|+|||+.|++.....+ .+ ......
T Consensus 257 ~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~~~-----~~-------~~~~~~ 320 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYD--GSLMVGDGSDAPVDVQDDS-----GY-------KIENDP 320 (388)
T ss_dssp EETTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTT--SSEEEEEECCC------------------------CCCC
T ss_pred cCCCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCC--CCeEccCCCcceeEeeecc-----cc-------ccCCCC
Confidence 33222 235999999984 4455533211 00000011 1579999998887653210 00 000111
Q ss_pred eeEeeecCCCceeeeeecCCcccceeeE-EeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCC
Q 007140 396 FLDLFDINTGSKERIWESNREKYFETAV-ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (616)
Q Consensus 396 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~ 462 (616)
.++.+|+++++.++|+..... ...+. .-........|+|||+++++.... ...++||+++++.+
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDTS--WKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp EEEEEETTTTEEEEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred EEEEEeccCCceEEeccccCc--ccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 244678888888777643320 00000 000000125789999998887654 45677999998754
No 15
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=3.9e-18 Score=192.38 Aligned_cols=333 Identities=10% Similarity=0.039 Sum_probs=196.0
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc-ccccccceEEecCCcEEEEEecCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~-~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
..+++|||||+.|+. . ...|+++++++|+.+++....... .......+.|||||+.|+|.....
T Consensus 19 ~~~~~w~~dg~~~~~-~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~--- 83 (740)
T 4a5s_A 19 LYSLRWISDHEYLYK-Q-----------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYV--- 83 (740)
T ss_dssp CCCEEECSSSEEEEE-E-----------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEE---
T ss_pred ccccEECCCCcEEEE-c-----------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCe---
Confidence 568999999975544 2 148999999999877765443211 111123489999999999963210
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC-CceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~-~~~~~~~~SpDg~~i 189 (616)
..+ .+. ....+|++|+ +|+.++|+.. .....++|||||++|
T Consensus 84 ------------------------~~~------r~~-------~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 84 ------------------------KQW------RHS-------YTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp ------------------------ECS------SSC-------EEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCE
T ss_pred ------------------------eeE------EEc-------cceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEE
Confidence 000 000 2467999999 6687788753 456789999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCcc---------CCCCcceeecCCCceEEEE
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR---------EGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~wspdg~~~l~~~ 260 (616)
+|+.. .+|+++++.+++.++|+...... ..+++.. .....+.|||||+. |+|.
T Consensus 127 a~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~---~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~ 188 (740)
T 4a5s_A 127 AYVWN--------------NDIYVKIEPNLPSYRITWTGKED---IIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYA 188 (740)
T ss_dssp EEEET--------------TEEEEESSTTSCCEECCSCCBTT---TEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEE
T ss_pred EEEEC--------------CeEEEEECCCCceEEEcCCCCcc---ceecCcccccccchhcCCCcceEECCCCCE-EEEE
Confidence 99953 27999999988877776522110 0001100 11234889999985 7776
Q ss_pred EeecCCCcccc------------------------cCCCceeEeccCCCCCC---C---CceEecc------ccccccce
Q 007140 261 EAQDRGDANVE------------------------VSPRDIIYTQPAEPAEG---E---KPEILHK------LDLRFRSV 304 (616)
Q Consensus 261 ~~~d~~~~~~~------------------------~~~~~~~~~~~~~~~~~---g---~~~~l~~------~~~~~~~~ 304 (616)
...+....... ......++++++ ++ + +...+.. .......+
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 265 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDV 265 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEE
Confidence 43222111000 011125777887 66 5 4445542 23345678
Q ss_pred eecCCCceEEEeeeccCccEEEEEEeCCCCCC-----CceEEeecccccccCCCCCCCeeeCCCCCEEE-EEeeecCCcc
Q 007140 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-----APRVLFDRVFENVYSDPGSPMMTRTSTGTNVI-AKIKKENDEQ 378 (616)
Q Consensus 305 ~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-----~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~-~~~~~~~~~~ 378 (616)
.|||||+.+++..+.......|+++|+++++. ..+.+................+.|+|||+.++ +.+...+ .
T Consensus 266 ~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G--~ 343 (740)
T 4a5s_A 266 TWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG--Y 343 (740)
T ss_dssp EEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS--C
T ss_pred EEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC--c
Confidence 99999996655544444556899999988420 01222111111000000011388999999987 4443221 3
Q ss_pred cEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeec--C-CCCceEE
Q 007140 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYH 455 (616)
Q Consensus 379 ~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss--~-~~p~~l~ 455 (616)
.+|| .+|+++++.++|+..... . .. .+++|+++++|..+. . ..-.+||
T Consensus 344 ~~l~----------------~~~~~~~~~~~lT~g~~~----v-~~--------~~~~d~~~i~f~~~~~~~~~~~~~ly 394 (740)
T 4a5s_A 344 RHIC----------------YFQIDKKDCTFITKGTWE----V-IG--------IEALTSDYLYYISNEYKGMPGGRNLY 394 (740)
T ss_dssp EEEE----------------EEETTCSSCEESCCSSSC----E-EE--------EEEECSSEEEEEESCGGGCTTCBEEE
T ss_pred eEEE----------------EEECCCCceEecccCCEE----E-EE--------EEEEeCCEEEEEEecCCCCCceeEEE
Confidence 3454 567878888888754321 1 11 123457788887654 1 2346799
Q ss_pred EEeCCCCcee-eeee
Q 007140 456 ILSWPLKKSS-QITN 469 (616)
Q Consensus 456 ~~~~~~~~~~-~Lt~ 469 (616)
.+++++++.+ +||.
T Consensus 395 ~v~~~g~~~~~~lt~ 409 (740)
T 4a5s_A 395 KIQLIDYTKVTCLSC 409 (740)
T ss_dssp EEETTEEEEEEESST
T ss_pred EEECCCCCcceeecc
Confidence 9998876654 6663
No 16
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.81 E-value=2.3e-17 Score=186.23 Aligned_cols=330 Identities=13% Similarity=0.145 Sum_probs=194.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc------------------c--ccccc
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL------------------N--AVFGS 91 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~------------------~--~~~~~ 91 (616)
.+..++|||||++|||.+..+.. .....||++++++|+.++++....... . ..+..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~----~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSD----RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSC----TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCceEecCCCEEEEEeccCCC----CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 46789999999999999863210 224699999999999888774421100 0 11467
Q ss_pred eEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC---C
Q 007140 92 FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T 167 (616)
Q Consensus 92 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g---~ 167 (616)
+.|||||+.|++.. ..+|+++|+ ++ +
T Consensus 114 ~~~SpDg~~l~~~~--------------------------------------------------~~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 114 YQWSPDAQRLLFPL--------------------------------------------------GGELYLYDLKQEGKAA 143 (741)
T ss_dssp CEECTTSSEEEEEE--------------------------------------------------TTEEEEEESSSCSTTS
T ss_pred eEECCCCCEEEEEe--------------------------------------------------CCcEEEEECCCCCcce
Confidence 89999999998851 146888888 56 6
Q ss_pred eeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC---CCccccC-ccC
Q 007140 168 AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED---IPVCYNS-VRE 242 (616)
Q Consensus 168 ~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~---~~~~~~~-~~~ 242 (616)
.++++.. .....++|||||++|+|... .+|+++|+.+++.+.++....... .+..... ...
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccc
Confidence 6677654 35678999999999999963 269999999888777654211000 0000000 000
Q ss_pred CCCcceeecCCCceEEEEEeecCCCcc---------------c------ccCCCceeEeccCCCCCC-CCceEecc---c
Q 007140 243 GMRSISWRADKPSTLYWVEAQDRGDAN---------------V------EVSPRDIIYTQPAEPAEG-EKPEILHK---L 297 (616)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~---------------~------~~~~~~~~~~~~~~~~~~-g~~~~l~~---~ 297 (616)
....+.|||||+. |++.......... . .......+++++. .+ ++...+.. .
T Consensus 210 ~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~ 285 (741)
T 2ecf_A 210 RHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKEQ 285 (741)
T ss_dssp CCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSCS
T ss_pred cccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCCc
Confidence 0245899999985 6665332211000 0 0011226777787 66 66665542 2
Q ss_pred cccccceeecCCCceEEEeee-ccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCC
Q 007140 298 DLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (616)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~-~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~ 376 (616)
......+.| |||+.|++... .......|+++|+.++ +.+.++......... ....+.|+|||+ +++.....+
T Consensus 286 ~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~~~~g- 358 (741)
T 2ecf_A 286 DIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSSERTG- 358 (741)
T ss_dssp SEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEECTTS-
T ss_pred ceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEecCCC-
Confidence 234567899 99998765432 2234568999999884 444444322110000 001289999999 444443221
Q ss_pred cccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCC-CCceEE
Q 007140 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYH 455 (616)
Q Consensus 377 ~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~-~p~~l~ 455 (616)
...|| .++++++ ...|+.... .+..+ ..|++|++++++..+... ....||
T Consensus 359 -~~~l~----------------~~~~~~~-~~~l~~~~~-----~v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 359 -FQHLY----------------RIDSKGK-AAALTHGNW-----SVDEL------LAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp -SCEEE----------------EECSSSC-EEESCCSSS-----CEEEE------EEEETTTTEEEEEECSSCTTCBEEE
T ss_pred -ccEEE----------------EEcCCCC-eeeeeecce-----EEEeE------eEEeCCCCEEEEEEeCCCCceEEEE
Confidence 23454 4555444 444432211 11111 137899998877765332 134578
Q ss_pred EEeCCCCceeeeee
Q 007140 456 ILSWPLKKSSQITN 469 (616)
Q Consensus 456 ~~~~~~~~~~~Lt~ 469 (616)
.++..++..++|+.
T Consensus 410 ~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 410 AVPLQGGQPQRLSK 423 (741)
T ss_dssp EEETTCCCCEECCC
T ss_pred EEEcCCCCeeeccc
Confidence 88766655677764
No 17
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=2.3e-17 Score=193.24 Aligned_cols=376 Identities=14% Similarity=0.085 Sum_probs=219.0
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (616)
.+||+.++.. |+.++|+.... .+..++|||||++|||.+..+.+ .+..+||++++++|+.++|+......
T Consensus 33 ~~l~~~~~~g----g~~~~lt~~~~--~v~~~~~SPDG~~la~~s~~~~~----~~~~~i~~~d~~~g~~~~lt~~~~~~ 102 (1045)
T 1k32_A 33 DDLWEHDLKS----GSTRKIVSNLG--VINNARFFPDGRKIAIRVMRGSS----LNTADLYFYNGENGEIKRITYFSGKS 102 (1045)
T ss_dssp TEEEEEETTT----CCEEEEECSSS--EEEEEEECTTSSEEEEEEEESTT----CCEEEEEEEETTTTEEEECCCCCEEE
T ss_pred CcEEEEECCC----CcEEEeeeCCC--cccCeEECCCCCEEEEEEeeccC----CCCCeEEEEECCCCCeEEcccCCCcc
Confidence 3689999854 89999985433 58999999999999999864211 34679999999999999998654310
Q ss_pred --ccccccceEEecCCcEEEEEecCCCC--C---C-------CCCcccCCCCee---------eecC------------c
Q 007140 85 --LNAVFGSFVWVNNSTLLIFTIPSSRR--D---P-------PKKTMVPLGPKI---------QSNE------------Q 129 (616)
Q Consensus 85 --~~~~~~~~~wspdg~~l~~~~~~~~~--~---~-------~~~~~~~~g~~~---------~~~~------------~ 129 (616)
....+..+.|||||+ |+|+...... . . .....+..++.. .... .
T Consensus 103 ~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g 181 (1045)
T 1k32_A 103 TGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRG 181 (1045)
T ss_dssp ETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCS
T ss_pred cccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccC
Confidence 000016799999999 6665432100 0 0 000011111000 0000 0
Q ss_pred cccchhccccc------cccCCC-------cccceeEe----ccceEEEEeCCC-CeeecCCCCceeeeeECCCCcEEEE
Q 007140 130 KNIIISRMTDN------LLKDEY-------DESLFDYY----TTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLI 191 (616)
Q Consensus 130 g~~~~~~~~~~------~~~~~~-------d~~~~~~~----~~~~l~~~d~~g-~~~~l~~~~~~~~~~~SpDg~~i~~ 191 (616)
+.....+...+ +..... ......+. ...+||.+++.+ ..++|+.......++|||||++|++
T Consensus 182 ~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~ 261 (1045)
T 1k32_A 182 GTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILF 261 (1045)
T ss_dssp TTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEE
T ss_pred CCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEE
Confidence 00000000000 000000 00011111 245788888854 6777776544456799999999999
Q ss_pred EeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceee-cCCCceEEEEEeecCCCccc
Q 007140 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDRGDANV 270 (616)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws-pdg~~~l~~~~~~d~~~~~~ 270 (616)
... ..|+++++++++...+..... ...+. +.........+.|| |||+. |++..
T Consensus 262 ~~~--------------~~i~~~d~~~~~l~~l~~~~~-~~~~~-~~~~~~~v~~~~~S~pdG~~-la~~~--------- 315 (1045)
T 1k32_A 262 SKG--------------GSIYIFNPDTEKIEKIEIGDL-ESPED-RIISIPSKFAEDFSPLDGDL-IAFVS--------- 315 (1045)
T ss_dssp EET--------------TEEEEECTTTCCEEECCCCCC-CBCCS-EEEECGGGGEEEEEECGGGC-EEEEE---------
T ss_pred EeC--------------CEEEEecCCceEeeeeccCcc-ccccc-ccccccccceeeecCCCCCE-EEEEE---------
Confidence 842 268999986655544332100 00000 00000123468999 99984 55542
Q ss_pred ccCCCceeEeccCCCCCCCCceEeccccc-cccceeecCCCceEEEeeeccCccEEEE-EEeCCCCCCCceEEeeccccc
Q 007140 271 EVSPRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLFDRVFEN 348 (616)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~l~-~~d~~~~~~~~~~l~~~~~~~ 348 (616)
...+++++. .+++...+..... ....+.|+ ||+.|++... ..+|| +++++++ +.+.+......
T Consensus 316 ----~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~~~~~~- 380 (1045)
T 1k32_A 316 ----RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFEENLGN- 380 (1045)
T ss_dssp ----TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECCCCCCS-
T ss_pred ----cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEecCCccc-
Confidence 245677676 5556556654444 56789999 9988777553 24899 9999873 44444321110
Q ss_pred ccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecC
Q 007140 349 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 428 (616)
Q Consensus 349 ~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~ 428 (616)
. ..++|||||+.|++... ...++ .+|+++++...+...... .+.
T Consensus 381 -~-----~~~~~SpDG~~la~~~~-----~~~v~----------------~~d~~tg~~~~~~~~~~~----~v~----- 424 (1045)
T 1k32_A 381 -V-----FAMGVDRNGKFAVVAND-----RFEIM----------------TVDLETGKPTVIERSREA----MIT----- 424 (1045)
T ss_dssp -E-----EEEEECTTSSEEEEEET-----TSEEE----------------EEETTTCCEEEEEECSSS----CCC-----
T ss_pred -e-----eeeEECCCCCEEEEECC-----CCeEE----------------EEECCCCceEEeccCCCC----Ccc-----
Confidence 0 12899999999987653 12233 468888887777533211 111
Q ss_pred CCcccccccCCEEEEEeecC------CCCceEEEEeCCCCceeeeeeC
Q 007140 429 QGEEDINLNQLKILTSKESK------TEITQYHILSWPLKKSSQITNF 470 (616)
Q Consensus 429 ~~~~~~s~d~~~~v~~~ss~------~~p~~l~~~~~~~~~~~~Lt~~ 470 (616)
...|||||+++++..... ..+..|++.++++++..+|+..
T Consensus 425 --~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 425 --DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp --CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS
T ss_pred --ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC
Confidence 246899999988876643 4567899999998876666654
No 18
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=5.8e-18 Score=175.56 Aligned_cols=324 Identities=10% Similarity=0.064 Sum_probs=183.2
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
+..++|||||++|+|+... ++..+||++++++++.++++...... ...+.|||||+.|+|...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~~------ 100 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGDN----TFGGFISTDERAFFYVKN------ 100 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCBC----TTTCEECTTSSEEEEEET------
T ss_pred eecCcCCCCCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCCc----cccceECCCCCEEEEEEc------
Confidence 6789999999999999864 35578999999999999987544311 234899999999999631
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCC-c-ee-----------
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA-V-YT----------- 178 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~-~-~~----------- 178 (616)
..+|+++++ +++.+++.... . ..
T Consensus 101 -------------------------------------------~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 101 -------------------------------------------ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp -------------------------------------------TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred -------------------------------------------CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCC
Confidence 124777777 44555554311 1 00
Q ss_pred --------eeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceee
Q 007140 179 --------AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (616)
Q Consensus 179 --------~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (616)
...|||||+++++...... .....|+++|+.+++.+.+.... .....+.|+
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~~~--------~~~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~s 196 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFYHT--------NPTCRLIKVDIETGELEVIHQDT-------------AWLGHPIYR 196 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHHHT--------CCCEEEEEEETTTCCEEEEEEES-------------SCEEEEEEE
T ss_pred ccccccccccccCCCCcceeeeeeccC--------CCcceEEEEECCCCcEEeeccCC-------------cccccceEC
Confidence 0345566655544321000 01347999999887766665311 012357899
Q ss_pred c-CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc--cccccceeecCCCceEEEeeeccC-ccEEE
Q 007140 251 A-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKT-SQTRT 326 (616)
Q Consensus 251 p-dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~--~~~~~~~~wspDg~~l~~~~~~~~-~~~~l 326 (616)
| ||+ .|+++.. ... ......+++++. ++++.+.+... ......+.|||||+.|++...... ....|
T Consensus 197 p~dg~-~l~~~~~--~~~----~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 197 PFDDS-TVGFCHE--GPH----DLVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp TTEEE-EEEEEEC--SCS----SSCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CCCCC-EEEEEec--CCC----CCCCceEEEEEC---CCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 9 775 4666631 110 011135677776 66666666552 223566899999997666543221 22359
Q ss_pred EEEeCCCCCCCceEEeecccccccCCCCCCCeeeCC-CCCEEEEEeeecCCcccEEEEEec-CCCCCCCcceeEeeecCC
Q 007140 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGR-GFTPEGNIPFLDLFDINT 404 (616)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~-dgk~l~~~~~~~~~~~~~l~~~~~-g~~~~~~~~~l~~~d~~~ 404 (616)
+++|+.++ +.+.+..... .. +.|++ ||+.+++.... . + +. ..+ +.........++.+|+++
T Consensus 267 ~~~d~~~g--~~~~l~~~~~--------~~-~~~s~~dg~~l~~~~~~-~-p---~~-~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 267 YKANPETL--ENEEVMVMPP--------CS-HLMSNFDGSLMVGDGCD-A-P---VD-VADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEECTTTC--CEEEEEECCS--------EE-EEEECSSSSEEEEEECC-C---------------CCCCCCEEEEEETTT
T ss_pred EEEECCCC--CeEEeeeCCC--------CC-CCccCCCCceEEEecCC-c-c---ee-eccccccccCCCCcEEEEeccc
Confidence 99999873 4444432211 11 78999 99976654311 0 0 00 000 000001112244678888
Q ss_pred CceeeeeecCCcccceee-EEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeee
Q 007140 405 GSKERIWESNREKYFETA-VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (616)
Q Consensus 405 g~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~L 467 (616)
++.++|...... .... ...........|++|++++++.... ...++||++++++++.+.+
T Consensus 330 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 330 KSAQKLCKHSTS--WDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp TBCCEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCTTCC---
T ss_pred CceEEccCCCCc--cccccccccCCCCCceEccCCCeEEEEecC-CCCceEEEEEEcccccccc
Confidence 877666543210 0000 0000000124688999988877654 4567899999887665443
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.80 E-value=2.6e-17 Score=172.31 Aligned_cols=246 Identities=14% Similarity=0.095 Sum_probs=171.0
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (616)
..|++.++. +++.+.++.... .+..++|||||++|||.+.. .+...|+++|+++|+.++++.... .
T Consensus 159 ~~i~i~d~~----g~~~~~l~~~~~--~v~~~~~Spdg~~la~~s~~-------~~~~~i~~~d~~tg~~~~l~~~~~-~ 224 (415)
T 2hqs_A 159 YELRVSDYD----GYNQFVVHRSPQ--PLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPR-H 224 (415)
T ss_dssp EEEEEEETT----SCSCEEEEEESS--CEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSS-C
T ss_pred ceEEEEcCC----CCCCEEEeCCCC--cceeeEEcCCCCEEEEEEec-------CCCcEEEEEECCCCcEEEeecCCC-c
Confidence 467888874 366777764332 48899999999999998853 345799999999999888865543 2
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC
Q 007140 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (616)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~ 164 (616)
+..+.|||||+.|+|+... + ...+||++|+
T Consensus 225 ----~~~~~~spdg~~la~~~~~---------------------------------------~-------g~~~i~~~d~ 254 (415)
T 2hqs_A 225 ----NGAPAFSPDGSKLAFALSK---------------------------------------T-------GSLNLYVMDL 254 (415)
T ss_dssp ----EEEEEECTTSSEEEEEECT---------------------------------------T-------SSCEEEEEET
T ss_pred ----ccCEEEcCCCCEEEEEEec---------------------------------------C-------CCceEEEEEC
Confidence 5689999999999986311 0 1357999999
Q ss_pred -CCCeeecCCCC-ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccC
Q 007140 165 -DGTAKDFGTPA-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (616)
Q Consensus 165 -~g~~~~l~~~~-~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (616)
+++.+.++... ....++|||||++|++.+.... ...||++|+.+++.+.++... .
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~-------------~ 311 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEG-------------S 311 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSS-------------S
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCC-------------C
Confidence 66777776543 5668999999999999975432 237999999887766654311 0
Q ss_pred CCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCc
Q 007140 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (616)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (616)
....+.|||||+. |++... +. ....+++++. .+++.+.+.... ....+.|+|||+.|++.... .+
T Consensus 312 ~~~~~~~spdG~~-l~~~~~-~~--------g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~ 376 (415)
T 2hqs_A 312 QNQDADVSSDGKF-MVMVSS-NG--------GQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQ-GM 376 (415)
T ss_dssp EEEEEEECTTSSE-EEEEEE-CS--------SCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEE-TT
T ss_pred cccCeEECCCCCE-EEEEEC-cC--------CceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcC-CC
Confidence 1235889999984 555522 11 1246777887 666776666543 66789999999987765532 34
Q ss_pred cEEEEEEeCCCCCCCceEEee--cccccccCCCCCCCeeeCCC
Q 007140 323 QTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTST 363 (616)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~d 363 (616)
...||++|+++ +..+.|.. ..+.+ ++|+|.
T Consensus 377 ~~~l~~~d~~g--~~~~~l~~~~~~v~~---------~~~~~~ 408 (415)
T 2hqs_A 377 GSVLNLVSTDG--RFKARLPATDGQVKF---------PAWSPY 408 (415)
T ss_dssp EEEEEEEETTS--CCEEECCCSSSEEEE---------EEECCC
T ss_pred ccEEEEEECCC--CcEEEeeCCCCCCcC---------Cccccc
Confidence 55899999987 34455532 22333 778775
No 20
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=1e-16 Score=165.95 Aligned_cols=309 Identities=9% Similarity=0.016 Sum_probs=188.9
Q ss_pred ceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccc
Q 007140 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (616)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (616)
..++|+....+++.+++|..........+..+.|||||++|+|....
T Consensus 10 ~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~--------------------------------- 56 (388)
T 3pe7_A 10 TFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF--------------------------------- 56 (388)
T ss_dssp CCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---------------------------------
T ss_pred cceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC---------------------------------
Confidence 46788755555678888866532111123358999999999996320
Q ss_pred cccCCCcccceeEeccceEEEEeC-CCCeeecCCCCc--eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC
Q 007140 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV--YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (616)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~~--~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (616)
+ ...+||++|+ +|+.++++.... ...+.|||||++|+|.... ..|+++|+.
T Consensus 57 ------~-------g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~ 110 (388)
T 3pe7_A 57 ------D-------GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDLA 110 (388)
T ss_dssp ------T-------SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEETT
T ss_pred ------C-------CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 0 1358999999 668888886542 2367999999999999743 269999999
Q ss_pred CceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc-----------cccCCCceeEeccCCCC
Q 007140 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN-----------VEVSPRDIIYTQPAEPA 286 (616)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~-----------~~~~~~~~~~~~~~~~~ 286 (616)
+++.+.+...+... .....+..+|||+. ++.+...+ .++. ........++++++
T Consensus 111 ~g~~~~~~~~~~~~----------~~~~~~~~~~dg~~-l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~d~--- 175 (388)
T 3pe7_A 111 TLEENVVYQVPAEW----------VGYGTWVANSDCTK-LVGIEIRR-EDWVPLTDWKKFHEFYFTKPCCRLMRVDL--- 175 (388)
T ss_dssp TCCEEEEEECCTTE----------EEEEEEEECTTSSE-EEEEEEEG-GGCCCCCSHHHHHHHGGGCCCEEEEEEET---
T ss_pred CCcceeeeechhhc----------ccccceeECCCCCe-eccccccC-cccccccccchhhhhhccCCcceEEEEEC---
Confidence 88777665432110 00001234889874 43332211 1110 01123357888887
Q ss_pred CCCCceEeccccccccceeecC-CCceEEEeeecc--CccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCC
Q 007140 287 EGEKPEILHKLDLRFRSVSWCD-DSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST 363 (616)
Q Consensus 287 ~~g~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~d 363 (616)
.+|+.+.+.........+.||| ||+.|++..... ....+||.++++++ ..+.|+......... .+.||||
T Consensus 176 ~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~-----~~~~spd 248 (388)
T 3pe7_A 176 KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCT-----HEFWVPD 248 (388)
T ss_dssp TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEE-----EEEECTT
T ss_pred CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccc-----cceECCC
Confidence 7778888876666677899999 999877654321 12458999999873 456664322100011 1789999
Q ss_pred CCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEE
Q 007140 364 GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 443 (616)
Q Consensus 364 gk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~ 443 (616)
|+.|++.....+.....+| .+|+++++.+.+..... ...... ......|+|||+++++
T Consensus 249 g~~l~~~~~~~~~~~~~l~----------------~~d~~~g~~~~l~~~~~---~~~~~~---~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIY----------------SADPETLENRQLTSMPA---CSHLMS---NYDGSLMVGDGSDAPV 306 (388)
T ss_dssp SSCEEEEEEETTCCCEEEE----------------EECTTTCCEEEEEEECC---EEEEEE---CTTSSEEEEEECCC--
T ss_pred CCEEEEEecCCCCCcceEE----------------EEecCCCceEEEEcCCC---ceeeee---cCCCCeEccCCCccee
Confidence 9998877654321111243 57888888777754331 001100 0112358999998887
Q ss_pred Eeec-----CCCCceEEEEeCCCCceeeeeeCCC
Q 007140 444 SKES-----KTEITQYHILSWPLKKSSQITNFPH 472 (616)
Q Consensus 444 ~~ss-----~~~p~~l~~~~~~~~~~~~Lt~~~~ 472 (616)
.... .....+||++++++++.++|+....
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp ----------CCCCEEEEEETTTTEEEEEEECCC
T ss_pred EeeeccccccCCCCEEEEEeccCCceEEeccccC
Confidence 6542 2456789999999999889987643
No 21
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.75 E-value=2.6e-16 Score=176.94 Aligned_cols=334 Identities=12% Similarity=0.057 Sum_probs=190.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....++|||||+.+ +.. . + ..|+++++++|+.+++....... ...+..+.|||||++|++.......
T Consensus 18 ~~~~~~~spdg~~~-~~~-~-------d--g~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~SpDg~~l~~~~~~~~~- 84 (723)
T 1xfd_A 18 HDPEAKWISDTEFI-YRE-Q-------K--GTVRLWNVETNTSTVLIEGKKIE-SLRAIRYEISPDREYALFSYNVEPI- 84 (723)
T ss_dssp CCCCCCBSSSSCBC-CCC-S-------S--SCEEEBCGGGCCCEEEECTTTTT-TTTCSEEEECTTSSEEEEEESCCCC-
T ss_pred cccccEEcCCCcEE-EEe-C-------C--CCEEEEECCCCcEEEEecccccc-ccccceEEECCCCCEEEEEecCccc-
Confidence 36789999999954 332 1 2 38999999999877766443210 0015689999999999996432100
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCC----ceeeeeECCCC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA----VYTAVEPSPDQ 186 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~----~~~~~~~SpDg 186 (616)
.. . .....|+++|+ +|+.++|+... .+..++|||||
T Consensus 85 --------------------------~~------~-------~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 85 --------------------------YQ------H-------SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp --------------------------SS------S-------CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred --------------------------ee------e-------cceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 00 0 01368999999 56777776432 25679999999
Q ss_pred cEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCc---------cCCCCcceeecCCCceE
Q 007140 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV---------REGMRSISWRADKPSTL 257 (616)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~wspdg~~~l 257 (616)
++|+|.+. .+|+++++.+++.+.++...... ..+++. ......+.|||||+. |
T Consensus 126 ~~la~~~~--------------~~i~~~~~~~g~~~~~~~~~~~~---~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-l 187 (723)
T 1xfd_A 126 QQLIFIFE--------------NNIYYCAHVGKQAIRVVSTGKEG---VIYNGLSDWLYEEEILKTHIAHWWSPDGTR-L 187 (723)
T ss_dssp TCEEEEET--------------TEEEEESSSSSCCEEEECCCBTT---TEEEEECCHHHHHTTSSSSEEEEECTTSSE-E
T ss_pred CEEEEEEC--------------CeEEEEECCCCceEEEecCCCCC---ceECcccceeEEEEeccCcceEEECCCCCE-E
Confidence 99999974 26999999888777665421110 000000 001135899999985 6
Q ss_pred EEEEeecCCCcccc----------------------cCCCceeEeccCCCCCCCCc-eEeccc------cccccceeecC
Q 007140 258 YWVEAQDRGDANVE----------------------VSPRDIIYTQPAEPAEGEKP-EILHKL------DLRFRSVSWCD 308 (616)
Q Consensus 258 ~~~~~~d~~~~~~~----------------------~~~~~~~~~~~~~~~~~g~~-~~l~~~------~~~~~~~~wsp 308 (616)
++....+....... ......+++++. .+++. ..+... ......+.|||
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~---~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp 264 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL---NGPTHDLEMMPPDDPRMREYYITMVKWAT 264 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES---SSSCCCEECCCCCCGGGSSEEEEEEEESS
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC---CCCceeEEeeCCccCCCccceeEEEEEeC
Confidence 66543221100000 011236777887 65553 445432 23456789999
Q ss_pred CCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEE-eeecCCc--ccEEEEEe
Q 007140 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK-IKKENDE--QIYILLNG 385 (616)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~-~~~~~~~--~~~l~~~~ 385 (616)
||+.+++..........|+++|++++ +.+.+.......... .....+.|||||+.|++. ....+.. ...+|
T Consensus 265 Dg~~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~--- 338 (723)
T 1xfd_A 265 STKVAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLH-RQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHIT--- 338 (723)
T ss_dssp SSEEEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCC-CCCCCCEECTTSCSEEEEEEECCSSSSCEEEEE---
T ss_pred CCeEEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEe-ccCCCceEcCCCCeEEEEEecccCCCcceeEEE---
Confidence 99976554333334568999999884 434443221100000 000138999999998886 3222100 12333
Q ss_pred cCCCCCCCcceeEeee-cCCCc---eeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCC-CCceEEEEeCC
Q 007140 386 RGFTPEGNIPFLDLFD-INTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYHILSWP 460 (616)
Q Consensus 386 ~g~~~~~~~~~l~~~d-~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~-~p~~l~~~~~~ 460 (616)
.+| .++++ ...|+.... .. ... ..|++|++.+++...... .-..||.+++.
T Consensus 339 -------------~~d~~~~~~~~~~~~l~~~~~----~~-~~~------~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 339 -------------VSSSQPNSSNDNIQSITSGDW----DV-TKI------LAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp -------------EECSSCCSSSCCCCBSCCSSS----CE-EEE------EEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred -------------EEeccCCCCccceeEeecCCe----EE-Eee------eEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 456 44555 455542211 11 111 258999998887665421 33568888766
Q ss_pred CC-ceeeee
Q 007140 461 LK-KSSQIT 468 (616)
Q Consensus 461 ~~-~~~~Lt 468 (616)
++ +.++|+
T Consensus 395 ~~~~~~~l~ 403 (723)
T 1xfd_A 395 GNFNRQCLS 403 (723)
T ss_dssp TTCCCBCSS
T ss_pred CCCCcceec
Confidence 54 345555
No 22
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.8e-15 Score=149.28 Aligned_cols=261 Identities=12% Similarity=0.051 Sum_probs=171.2
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCC-CceEecccCCCc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAKPLFESPDI 83 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~-g~~~~lt~~~~~ 83 (616)
..|++.++.. ++.+++..... .+..++|||||++|++.. ...|+++++++ ++.++++.....
T Consensus 22 ~~i~~~d~~~----~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 22 SSIEIFNIRT----RKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-----------EGLLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp EEEEEEETTT----TEEEEEEEESS--CCEEEEECTTSSEEEEEE-----------TTEEEEEESSSCCSCEECCCTTCC
T ss_pred eeEEEEeCCC----CceeeeccCCc--ceEeeEECCCCCEEEEEc-----------CCeEEEEeCCCCCCceEecccccc
Confidence 4688888754 77777764332 588999999999999864 24899999999 888877643311
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEe
Q 007140 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (616)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d 163 (616)
..+..+.|+|||+.|++..... + ...+||.++
T Consensus 85 ---~~~~~~~~spdg~~l~~~~~~~--------------------------------------~-------~~~~l~~~~ 116 (297)
T 2ojh_A 85 ---ICNNDHGISPDGALYAISDKVE--------------------------------------F-------GKSAIYLLP 116 (297)
T ss_dssp ---CBCSCCEECTTSSEEEEEECTT--------------------------------------T-------SSCEEEEEE
T ss_pred ---ccccceEECCCCCEEEEEEeCC--------------------------------------C-------CcceEEEEE
Confidence 1256799999999998863110 0 135789999
Q ss_pred C-CCCeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccC
Q 007140 164 L-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (616)
Q Consensus 164 ~-~g~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (616)
+ +++.+.+........++|||||++|++...... ...||.+++.+++.+.+.... .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~-------------~ 173 (297)
T 2ojh_A 117 STGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE-------------G 173 (297)
T ss_dssp TTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS-------------S
T ss_pred CCCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC-------------C
Confidence 8 557777766555667899999999998765432 236788888877766655421 1
Q ss_pred CCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccC-
Q 007140 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT- 321 (616)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~- 321 (616)
....+.|+|||+. |++....+ ....++.++. .++..+.+.........+.|+|||+.|++......
T Consensus 174 ~~~~~~~s~dg~~-l~~~~~~~---------~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 174 RNDGPDYSPDGRW-IYFNSSRT---------GQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp CEEEEEECTTSSE-EEEEECTT---------SSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred ccccceECCCCCE-EEEEecCC---------CCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 1235889999984 54442111 1235565564 44556666555555667899999998766543211
Q ss_pred ------ccEEEEEEeCCCCCCCceEEeecc-cccccCCCCCCCeeeCCCCCEEEEEeee
Q 007140 322 ------SQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (616)
Q Consensus 322 ------~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~g~~~~~~s~dgk~l~~~~~~ 373 (616)
....|+++|+.++ +.+.+.... ..... ..+.|+|||+.|++....
T Consensus 241 ~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~-----~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTM-----NSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CSCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTS-----CSCCBCTTSSEEEEEEEC
T ss_pred CcccccCceEEEEEecCCC--CceeeeccCCCCccc-----ccceECCCCCEEEEEEec
Confidence 2357999999874 444443210 00111 128999999998887653
No 23
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=1.2e-15 Score=159.72 Aligned_cols=230 Identities=17% Similarity=0.173 Sum_probs=157.4
Q ss_pred CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCC
Q 007140 41 DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (616)
Q Consensus 41 DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 120 (616)
.+++|+|++..+. ......|+++|+++++.+.++..... +..+.|||||+.|++...+
T Consensus 142 ~~~~l~~~s~~~~----~~~~~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~------------- 199 (415)
T 2hqs_A 142 FRTRIAYVVQTNG----GQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFE------------- 199 (415)
T ss_dssp TTCEEEEEEECSS----SSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECT-------------
T ss_pred CCCEEEEEEecCC----CCccceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEec-------------
Confidence 4899999986411 01127999999998888888755432 5689999999999986311
Q ss_pred CCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC-CceeeeeECCCCcEEEEEeccCCC
Q 007140 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPY 198 (616)
Q Consensus 121 g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~ 198 (616)
+ ....|+++|+ +|+.+.+... ..+..++|||||++|+|+.....
T Consensus 200 ---------~------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g- 245 (415)
T 2hqs_A 200 ---------S------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG- 245 (415)
T ss_dssp ---------T------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS-
T ss_pred ---------C------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC-
Confidence 0 1257899999 6777666543 35678999999999998865422
Q ss_pred cccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCcee
Q 007140 199 SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDII 278 (616)
Q Consensus 199 ~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~ 278 (616)
..+|+++|+.+++.+.++.... ....+.|+|||+. |++... + .....+
T Consensus 246 ---------~~~i~~~d~~~~~~~~l~~~~~-------------~~~~~~~spdg~~-l~~~s~-~--------~g~~~i 293 (415)
T 2hqs_A 246 ---------SLNLYVMDLASGQIRQVTDGRS-------------NNTEPTWFPDSQN-LAFTSD-Q--------AGRPQV 293 (415)
T ss_dssp ---------SCEEEEEETTTCCEEECCCCSS-------------CEEEEEECTTSSE-EEEEEC-T--------TSSCEE
T ss_pred ---------CceEEEEECCCCCEEeCcCCCC-------------cccceEECCCCCE-EEEEEC-C--------CCCcEE
Confidence 2479999998877766654211 1235899999984 555521 1 112367
Q ss_pred EeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecc-cccccCCCCCCC
Q 007140 279 YTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPM 357 (616)
Q Consensus 279 ~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~g~~~ 357 (616)
++++. .+++.+.+.........+.|||||+.|++.... .+...|+++|++++ +.+.+.... .. .
T Consensus 294 ~~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~--~~~~l~~~~~~~---------~ 358 (415)
T 2hqs_A 294 YKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATG--GVQVLSSTFLDE---------T 358 (415)
T ss_dssp EEEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTC--CEEECCCSSSCE---------E
T ss_pred EEEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECc-CCceEEEEEECCCC--CEEEecCCCCcC---------C
Confidence 87787 666766666544556679999999987766532 23468999999884 444443321 11 2
Q ss_pred eeeCCCCCEEEEEeee
Q 007140 358 MTRTSTGTNVIAKIKK 373 (616)
Q Consensus 358 ~~~s~dgk~l~~~~~~ 373 (616)
++|+|||+.|++....
T Consensus 359 ~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred eEEcCCCCEEEEEEcC
Confidence 8999999998887653
No 24
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=1.4e-15 Score=154.91 Aligned_cols=311 Identities=13% Similarity=0.114 Sum_probs=183.3
Q ss_pred CCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecC
Q 007140 28 PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (616)
Q Consensus 28 ~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~ 107 (616)
.....+..|++ ||++|||+....... ......+||++++++++.+++ .. ...+.|||||+.|+|....
T Consensus 12 ~~~~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~~~l---~~------~~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 12 AKFAYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNARRFI---EN------ATMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp CCSCEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCEEEE---ES------CEEEEECTTSSEEEEEEEE
T ss_pred eeeEEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCceEEc---cc------CCCeEECCCCCEEEEEEec
Confidence 33335778899 999999987642100 012367899999999988887 11 5679999999999996321
Q ss_pred CCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCCceeeeeECCCC
Q 007140 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQ 186 (616)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~~~~~~~~SpDg 186 (616)
. + + ...+||++++ +|+.++++....+..+.|||||
T Consensus 80 ~---------------------~----------------~-------~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg 115 (347)
T 2gop_A 80 E---------------------E----------------K-------KVSEIWVADLETLSSKKILEAKNIRSLEWNEDS 115 (347)
T ss_dssp T---------------------T----------------T-------TEEEEEEEETTTTEEEEEEEESEEEEEEECTTS
T ss_pred c---------------------C----------------C-------CcceEEEEECCCCceEEEEcCCCccceeECCCC
Confidence 0 0 0 1357999999 5577777543236789999999
Q ss_pred cEEEEEeccCCCc------ccccCc--------ccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeec
Q 007140 187 KYVLITSMHRPYS------YKVPCA--------RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (616)
Q Consensus 187 ~~i~~~~~~~~~~------~~~~~~--------~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (616)
++|+|.....+.. ..+++. .....|+++++.+++. +.++. + ....+.|+|
T Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--------------~~~~~~~sp 180 (347)
T 2gop_A 116 RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--------------RFSSGIWHR 180 (347)
T ss_dssp SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--------------TTCEEEEET
T ss_pred CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--------------CcccccCCC
Confidence 9999997531100 000000 0135799999988876 66654 2 124688999
Q ss_pred CCCceEEEEEeecCCCcccccCC-CceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccC----ccEEE
Q 007140 252 DKPSTLYWVEAQDRGDANVEVSP-RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRT 326 (616)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~----~~~~l 326 (616)
|| ++++...+.... ... ...++.++ +++.+.|... ... ..+||||+.|++...... ...+|
T Consensus 181 dg---~~~~~~~~~~~~---~~~~~~~l~~~d-----~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 181 DK---IVVNVPHREIIP---QYFKFWDIYIWE-----DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TE---EEEEEECCCSSC---CSSCCEEEEEEE-----TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEE
T ss_pred Ce---EEEEEecccccc---cccccccEEEeC-----CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceE
Confidence 98 555532221100 001 23455544 2456666554 333 344999998766542211 24589
Q ss_pred EEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCc
Q 007140 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (616)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (616)
|++| + ++.+.++...-.. +. ..+.|+ || +++.....+ ...| + ++ +++
T Consensus 247 ~~~d--~--~~~~~l~~~~~~~-~~----~~~~~s-dg--~~~~~~~~~--~~~l----------------~-~~--~g~ 293 (347)
T 2gop_A 247 YIYD--G--KEVMGILDEVDRG-VG----QAKIKD-GK--VYFTLFEEG--SVNL----------------Y-IW--DGE 293 (347)
T ss_dssp EEEC--S--SCEEESSTTCCSE-EE----EEEEET-TE--EEEEEEETT--EEEE----------------E-EE--SSS
T ss_pred EEEC--C--CceEeccccCCcc-cC----CccEEc-Cc--EEEEEecCC--cEEE----------------E-Ec--CCc
Confidence 9999 4 3445453221000 00 016788 77 555544322 2233 3 34 355
Q ss_pred eeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeeeeeCCCCC
Q 007140 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY 474 (616)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt~~~~~~ 474 (616)
...++... ..+.. ..+++ .+++..++...|++||.++ ++.++||+.+..+
T Consensus 294 ~~~~~~~~-----~~v~~-------~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 294 IKPIAKGR-----HWIMG-------FDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp EEEEECSS-----SEEEE-------EEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred eEEEecCC-----CeEEe-------eeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 55554321 11221 23455 5788888899999999998 6788999886543
No 25
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=4.5e-16 Score=174.99 Aligned_cols=329 Identities=10% Similarity=0.019 Sum_probs=184.6
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...++|||||+ +++.. ....|+++++++|+.++++...... ...+..+.|||||+.|+|.....
T Consensus 18 ~~~~~~s~dg~-~~~~~----------~d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~---- 81 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQS----------ADNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYS---- 81 (719)
T ss_dssp CCCCEESSSSE-EEEEC----------TTSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEE----
T ss_pred CCccEECCCCe-EEEEc----------CCCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCc----
Confidence 45889999994 44432 1358999999999988887442110 00145899999999999963210
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe---eecCCCCceeeeeECCCCcE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTPAVYTAVEPSPDQKY 188 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~---~~l~~~~~~~~~~~SpDg~~ 188 (616)
+ .+ .+. ...+|+++|+ +|+. ++|.. .+..++|||||++
T Consensus 82 -----------------~------~~------~~s-------~~~~i~~~d~~~g~~~~~~~l~~--~~~~~~~SPDG~~ 123 (719)
T 1z68_A 82 -----------------K------LW------RYS-------YTATYYIYDLSNGEFVRGNELPR--PIQYLCWSPVGSK 123 (719)
T ss_dssp -----------------E------CS------SSC-------EEEEEEEEETTTTEECCSSCCCS--SBCCEEECSSTTC
T ss_pred -----------------e------eE------Eee-------cceEEEEEECCCCccccceecCc--ccccceECCCCCE
Confidence 0 00 000 1357999999 5666 56642 3567999999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCc----c-----CCCCcceeecCCCceEEE
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV----R-----EGMRSISWRADKPSTLYW 259 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~----~-----~~~~~~~wspdg~~~l~~ 259 (616)
|+|... .+|+++++.+++...++...... ..+++. + .....+.|||||+. |++
T Consensus 124 la~~~~--------------~~i~~~~~~~g~~~~l~~~~~~~---~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~ 185 (719)
T 1z68_A 124 LAYVYQ--------------NNIYLKQRPGDPPFQITFNGREN---KIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAY 185 (719)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCCCCBTT---TEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEE
T ss_pred EEEEEC--------------CeEEEEeCCCCCcEEEecCCCcC---CeEcccccceeeeecccCcccEEECCCCCE-EEE
Confidence 999853 27999999877766665321100 000000 0 00136899999985 666
Q ss_pred EEeecCCCccc----------------------ccCCCceeEeccCCCCCCCCce---Eec------cccccccceeecC
Q 007140 260 VEAQDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKPE---ILH------KLDLRFRSVSWCD 308 (616)
Q Consensus 260 ~~~~d~~~~~~----------------------~~~~~~~~~~~~~~~~~~g~~~---~l~------~~~~~~~~~~wsp 308 (616)
....+...... .......++++++ ++++.. .+. ........+.|||
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT---TYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES---SCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC---CCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 54322210000 0011235667776 554431 222 1223456789999
Q ss_pred CCceEEEeeeccCccEEEEEEe----CCCCCCCceEEee---cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEE
Q 007140 309 DSLALVNETWYKTSQTRTWLVC----PGSKDVAPRVLFD---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 381 (616)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~d----~~~~~~~~~~l~~---~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l 381 (616)
|++.++..........+||++| +.++ +.+.++. ..............+.|+|||+.+++...... ....|
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-g~~~l 339 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD-GYKHI 339 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT-SCEEE
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC-CceEE
Confidence 9875444322333456899999 7663 3333331 11110010000013789999998877543221 12234
Q ss_pred EEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeec---CCCCceEEEEe
Q 007140 382 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES---KTEITQYHILS 458 (616)
Q Consensus 382 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss---~~~p~~l~~~~ 458 (616)
| .+++++++.+.|+.... .+.. ..++ +++++++.... ...-..||.++
T Consensus 340 ~----------------~~~~~~~~~~~lt~~~~-----~v~~-------~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 340 H----------------YIKDTVENAIQITSGKW-----EAIN-------IFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp E----------------EESSCSTTCEECSCSSS-----CEEE-------EEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred E----------------EEECCCCceEecccCce-----EEEE-------EEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 4 46776776666643221 1111 1234 77888887754 12346788888
Q ss_pred CCCC--ceeeee
Q 007140 459 WPLK--KSSQIT 468 (616)
Q Consensus 459 ~~~~--~~~~Lt 468 (616)
++++ +.++|+
T Consensus 391 ~~~g~~~~~~l~ 402 (719)
T 1z68_A 391 IGSYPPSKKCVT 402 (719)
T ss_dssp CSSSSCCEEESS
T ss_pred CCCCCCCceecc
Confidence 7665 345665
No 26
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=8.7e-15 Score=164.13 Aligned_cols=295 Identities=13% Similarity=0.147 Sum_probs=174.4
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCC-----CceEeccc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-----GEAKPLFE 79 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~-----g~~~~lt~ 79 (616)
..|++.++.. ++.++++.... .+..++|||||++|||+. ..+||++++.+ |+.++++.
T Consensus 101 ~~i~~~d~~~----~~~~~l~~~~~--~~~~~~~SpdG~~la~~~-----------~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLA----RKVTYLFDTNE--ETASLDFSPVGDRVAYVR-----------NHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTT----TEEEEEECCTT--CCTTCEECTTSSEEEEEE-----------TTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCC----CceEEccCCcc--cccCCcCCCCCCEEEEEE-----------CCeEEEEecCcccccCCCcEEecc
Confidence 3578888754 77777774322 488999999999999963 25899999999 99888875
Q ss_pred CCCccc-cc---------cccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCccc
Q 007140 80 SPDICL-NA---------VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (616)
Q Consensus 80 ~~~~~~-~~---------~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 149 (616)
.....+ +. ....+.|||||+.|++...+..... .+........ . ..... ..++....
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~----------~~~~~~~~~~-~-~~~~~-~~y~~~g~ 230 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK----------PTPIVDYHPL-E-AESKP-LYYPMAGT 230 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC----------CEEEEECCSS-S-CEEEE-ECCCBTTS
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc----------eEEeeccCCC-C-CceEE-eeCCCCCC
Confidence 543210 00 0257899999999999753221110 0000000000 0 00000 01111100
Q ss_pred ceeEeccceEEEEeC-CCCeeecCCC----CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEE
Q 007140 150 LFDYYTTAQLVLGSL-DGTAKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE 223 (616)
Q Consensus 150 ~~~~~~~~~l~~~d~-~g~~~~l~~~----~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~ 223 (616)
.....+|+++|+ +++.+.+... ..+..++|||||++|++...++.. ....|+++|+.++ +.+.
T Consensus 231 ---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 231 ---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRT 299 (706)
T ss_dssp ---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEE
T ss_pred ---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeE
Confidence 012468999999 5666666532 245689999999999998654321 1247999999877 6555
Q ss_pred ecCCCCCCCCCccccCccCCCCcceeec--CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccc
Q 007140 224 LCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (616)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wsp--dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~ 301 (616)
+........ ......+.|+| ||+ +++....+ ....++.++. +++..+.|+......
T Consensus 300 ~~~~~~~~~--------~~~~~~~~~sp~~dg~--~l~~~~~~---------g~~~l~~~~~---~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 300 LFVETDKHY--------VEPLHPLTFLPGSNNQ--FIWQSRRD---------GWNHLYLYDT---TGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEEECSSC--------CCCCSCCEECTTCSSE--EEEEECTT---------SSCEEEEEET---TSCEEEECCCSSSCE
T ss_pred EEEccCCCe--------ECccCCceeecCCCCE--EEEEEccC---------CccEEEEEEC---CCCEEEecCCCCeEE
Confidence 432100000 00013478999 987 33432111 1235666665 555556676554444
Q ss_pred cc-eeecCCCceEEEeeeccC-ccEEEEEEeCCCCCCCceEEeec-ccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007140 302 RS-VSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (616)
Q Consensus 302 ~~-~~wspDg~~l~~~~~~~~-~~~~l~~~d~~~~~~~~~~l~~~-~~~~~~~~~g~~~~~~s~dgk~l~~~~~~ 373 (616)
.. +.|+|||..|++....+. ...+||.++++++ +.+.|... .+. .++|||||+++++....
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~---------~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTPESGMH---------RTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCCSSSEE---------EEEECTTSSEEEEEEEC
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccCCCceE---------EEEECCCCCEEEEEecC
Confidence 44 799999988766543321 2458999999873 44555321 122 28999999998877543
No 27
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.69 E-value=1.2e-15 Score=158.11 Aligned_cols=285 Identities=14% Similarity=0.082 Sum_probs=167.5
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (616)
..||+.++.. ++.++++..... ....+.|||||++|+|++.. .+||++++++++.++++....
T Consensus 60 ~~l~~~d~~~----~~~~~l~~~~~~-~~~~~~~spdg~~l~~~~~~----------~~l~~~d~~~~~~~~~~~~~~-- 122 (396)
T 3c5m_A 60 RNYYLLNLET----QQAVQLTEGKGD-NTFGGFISTDERAFFYVKNE----------LNLMKVDLETLEEQVIYTVDE-- 122 (396)
T ss_dssp CEEEEEETTT----TEEEECCCSSCB-CTTTCEECTTSSEEEEEETT----------TEEEEEETTTCCEEEEEECCT--
T ss_pred ceEEEEECCC----CcEEEeecCCCC-ccccceECCCCCEEEEEEcC----------CcEEEEECCCCCcEEEEeccc--
Confidence 3688888754 777787632221 23348999999999999742 379999999999888864321
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeE------eccce
Q 007140 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY------YTTAQ 158 (616)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~------~~~~~ 158 (616)
.|+++|+.|+|....... ..+. . . .....+.....+ ....+
T Consensus 123 --------~~~~~g~~l~~~~~~~~~-----------~~~~-~--~-----------~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 123 --------EWKGYGTWVANSDCTKLV-----------GIEI-L--K-----------RDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp --------TEEEEEEEEECTTSSEEE-----------EEEE-E--G-----------GGCCCCCSHHHHHHHHHTCCCEE
T ss_pred --------ccCCCCCEEEeccCCccc-----------cccc-c--c-----------cccCCCCcceeeeeeccCCCcce
Confidence 288999988884211000 0000 0 0 000001110000 12468
Q ss_pred EEEEeC-CCCeeecCCC-CceeeeeECC-CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCc
Q 007140 159 LVLGSL-DGTAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (616)
Q Consensus 159 l~~~d~-~g~~~~l~~~-~~~~~~~~Sp-Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (616)
|+++|+ +|+.+.+... ..+..+.||| ||++|+|... .+.. ....+|+++++++++.+.+......
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~------~~~~~l~~~d~~~~~~~~l~~~~~~----- 237 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPHD------LVDARMWLVNEDGSNVRKIKEHAEG----- 237 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCSS------SCSCCCEEEETTSCCCEESSCCCTT-----
T ss_pred EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CCCC------CCCceEEEEECCCCceeEeeccCCC-----
Confidence 999999 6677766533 2456889999 8999999864 2210 0124799999988776665541000
Q ss_pred cccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecC-CCceEE
Q 007140 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD-DSLALV 314 (616)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wsp-Dg~~l~ 314 (616)
.....+.|+|||+. |+++...++ .....+++++. .+++.+.+..... .. +.|+| ||+.++
T Consensus 238 ------~~~~~~~~spdg~~-l~~~~~~~~-------~~~~~l~~~d~---~~g~~~~l~~~~~-~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 238 ------ESCTHEFWIPDGSA-MAYVSYFKG-------QTDRVIYKANP---ETLENEEVMVMPP-CS-HLMSNFDGSLMV 298 (396)
T ss_dssp ------EEEEEEEECTTSSC-EEEEEEETT-------TCCEEEEEECT---TTCCEEEEEECCS-EE-EEEECSSSSEEE
T ss_pred ------ccccceEECCCCCE-EEEEecCCC-------CccceEEEEEC---CCCCeEEeeeCCC-CC-CCccCCCCceEE
Confidence 01224789999985 666533211 11124788887 6667666654332 22 89999 999766
Q ss_pred Eeeec------------cCccEEEEEEeCCCCCCCceEEeeccccc-cc---CCCCCCCeeeCCCCCEEEEEee
Q 007140 315 NETWY------------KTSQTRTWLVCPGSKDVAPRVLFDRVFEN-VY---SDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 315 ~~~~~------------~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~---~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
+.... ..+...||++|++++ +.+.|....... .+ .......++|+|||+.|++...
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAK--SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTT--BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccC--ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 53210 113358999999874 445554322100 00 0000123789999999988764
No 28
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=2.3e-14 Score=159.47 Aligned_cols=284 Identities=14% Similarity=0.107 Sum_probs=169.9
Q ss_pred CCCceeeecCCCCCccc---------ceEEc--cCCCe-EEEEEeeccccccCCCceeEEEEECC--C-CceEecccCCC
Q 007140 18 LGPEKEVHGYPDGAKIN---------FVSWS--PDGKR-IAFSVRVDEEDNVSSCKLRVWIADAE--T-GEAKPLFESPD 82 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~---------~~~~S--PDG~~-iaf~~~~~~~~~~~~~~~~l~v~~~~--~-g~~~~lt~~~~ 82 (616)
+|+.++|+.... .+. .+.|| |||++ |+|... ...+||++++. + ++.++|+....
T Consensus 57 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~---------~~~~l~~~~~~~~g~~~~~~l~~~~~ 125 (662)
T 3azo_A 57 DGAEESALPAPW--NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF---------GDQRLYAFEPDAPGGAVPRPLTPVSA 125 (662)
T ss_dssp TSCEEESSCTTC--CBCCCGGGTCCCCEEEECCSSSSCEEEEEBT---------TTCCEEEECTTSTTCCCCEECSCCCC
T ss_pred CCCcceeCCCCc--cccccccccCCccceeeeecCCCeEEEEEEC---------CCCeEEEEcCCCCCCCCCEeccCCcc
Confidence 477888874322 233 56676 99999 999763 25789999998 6 88899986421
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEE
Q 007140 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (616)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (616)
..-......+.|||||+.|+|...+... .+ .. ....+|+++
T Consensus 126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~------------------~~---------------~~------~~~~~i~~~ 166 (662)
T 3azo_A 126 VGGGLRWADPVLLPERGEVWCMAEEFTG------------------EG---------------PS------DVRRFLAAV 166 (662)
T ss_dssp STTCEEEEEEEEETTTTEEEEEEEEECS------------------SS---------------TT------CEEEEEEEE
T ss_pred CCCCccccCcEECCCCCEEEEEEecccC------------------CC---------------CC------CceeEEEEE
Confidence 0001125689999999999996421000 00 00 024689999
Q ss_pred eC-C------CCeeecC-CC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-Cc---eEEEecCCCC
Q 007140 163 SL-D------GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK---LVRELCDLPP 229 (616)
Q Consensus 163 d~-~------g~~~~l~-~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~---~~~~l~~~~~ 229 (616)
|+ + ++.++|+ .. ..+..++|||||++|++.+...+. ++|. ..+|+++|++ ++ +.+.+....
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~---~~~~--~~~i~~~d~~~~g~~~~~~~l~~~~- 240 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR---MPWE--GTELKTARVTEDGRFADTRTLLGGP- 240 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC---CTTT--CEEEEEEEECTTSCEEEEEEEEEET-
T ss_pred ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC---CCCC--CcEEEEEEECCCCcccccEEeCCCC-
Confidence 99 5 5677777 54 356689999999999999765421 1111 3589999998 45 555554310
Q ss_pred CCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccccccc-------
Q 007140 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFR------- 302 (616)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~------- 302 (616)
......+.|||||+ +++....+ ....++.++. ++++.+.++.......
T Consensus 241 -----------~~~~~~~~~spdg~--l~~~~~~~---------~~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 241 -----------EEAIAQAEWAPDGS--LIVATDRT---------GWWNLHRVDP---ATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp -----------TBCEEEEEECTTSC--EEEEECTT---------SSCEEEEECT---TTCCEEESSCCSSBSSCCCCSTT
T ss_pred -----------CceEcceEECCCCe--EEEEECCC---------CCeEEEEEEC---CCCceeecccccccccCcccccc
Confidence 01123588999998 65653211 1126777776 6677777665433333
Q ss_pred --ceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccE
Q 007140 303 --SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (616)
Q Consensus 303 --~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~ 380 (616)
.+.|+||+..++... . +..+||.+|++++ +.+.|..... . + ...|+++|+.+++...... ....
T Consensus 296 ~~~~~~~~~~~~~~~~~-~--~~~~l~~~d~~~~--~~~~l~~~~~-~-~------~~~~s~~~~~~~~~~~~~~-~~~~ 361 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHG-K--GAAVLGILDPESG--ELVDAAGPWT-E-W------AATLTVSGTRAVGVAASPR-TAYE 361 (662)
T ss_dssp CCSEEECTTSCEEEEEB-S--SSCEEEEEETTTT--EEEECCSSCC-E-E------EEEEEEETTEEEEEEEETT-EEEE
T ss_pred CceEeEeCCCEEEEEEE-c--CccEEEEEECCCC--cEEEecCCCC-e-E------EEEEecCCCEEEEEEcCCC-CCCE
Confidence 345556776544433 2 5569999999873 3444432110 0 0 0122667777777654332 1123
Q ss_pred EEEEecCCCCCCCcceeEeeecCCCceeeeee
Q 007140 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (616)
Q Consensus 381 l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (616)
+| .+|+++++.+.|+.
T Consensus 362 i~----------------~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 362 VV----------------ELDTVTGRARTIGA 377 (662)
T ss_dssp EE----------------EEETTTCCEEEEES
T ss_pred EE----------------EEECCCCceEEeec
Confidence 43 46777777666654
No 29
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.61 E-value=3.1e-13 Score=158.21 Aligned_cols=278 Identities=10% Similarity=-0.016 Sum_probs=176.7
Q ss_pred CCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCC
Q 007140 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (616)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (616)
++.++++.+.. .+..|.|||| +|+|++.. ++...||.+++++++.++++.... +..+.|||||
T Consensus 194 ~~~~~l~~~~~--~v~~~~~s~d--~l~~~~~~-------dg~~~l~~~~~~g~~~~~l~~~~~------~~~~~~SpDG 256 (1045)
T 1k32_A 194 GAFKKIVDMST--HVSSPVIVGH--RIYFITDI-------DGFGQIYSTDLDGKDLRKHTSFTD------YYPRHLNTDG 256 (1045)
T ss_dssp TEEEEEECCSS--CCEEEEEETT--EEEEEECT-------TSSCEEEEEETTSCSCEECCCCCS------SCEEEEEESS
T ss_pred CCeEECcCCCC--cccceEEeCC--EEEEEEec-------cCceEEEEEeCCCCcceEecCCCC------cceeeEcCCC
Confidence 56667764333 5889999998 88998754 466899999998888888875543 4567999999
Q ss_pred cEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCC----
Q 007140 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT---- 173 (616)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~---- 173 (616)
+.|++... ..|+++++.+ .+..+..
T Consensus 257 ~~la~~~~--------------------------------------------------~~i~~~d~~~~~l~~l~~~~~~ 286 (1045)
T 1k32_A 257 RRILFSKG--------------------------------------------------GSIYIFNPDTEKIEKIEIGDLE 286 (1045)
T ss_dssp SCEEEEET--------------------------------------------------TEEEEECTTTCCEEECCCCCCC
T ss_pred CEEEEEeC--------------------------------------------------CEEEEecCCceEeeeeccCccc
Confidence 99988521 1344444421 2222222
Q ss_pred --------CCceeeeeEC-CCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCC
Q 007140 174 --------PAVYTAVEPS-PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGM 244 (616)
Q Consensus 174 --------~~~~~~~~~S-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (616)
...+..++|| |||++|++... ..++++++.+++...+...+. ...
T Consensus 287 ~~~~~~~~~~~v~~~~~S~pdG~~la~~~~--------------~~i~~~~~~~~~~~~~~~~~~------------~~~ 340 (1045)
T 1k32_A 287 SPEDRIISIPSKFAEDFSPLDGDLIAFVSR--------------GQAFIQDVSGTYVLKVPEPLR------------IRY 340 (1045)
T ss_dssp BCCSEEEECGGGGEEEEEECGGGCEEEEET--------------TEEEEECTTSSBEEECSCCSC------------EEE
T ss_pred ccccccccccccceeeecCCCCCEEEEEEc--------------CEEEEEcCCCCceEEccCCCc------------ceE
Confidence 1135689999 99999999862 268999998777666543110 012
Q ss_pred CcceeecCCCceEEEEEeecCCCcccccCCCceeE-eccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCcc
Q 007140 245 RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIY-TQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 245 ~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
..+.|+ ||+. |++.. ....++ +++. .+++.+.+.........+.|||||+.|++....
T Consensus 341 ~~~~~s-dg~~-l~~~s------------~~~~l~~~~d~---~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~---- 399 (1045)
T 1k32_A 341 VRRGGD-TKVA-FIHGT------------REGDFLGIYDY---RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR---- 399 (1045)
T ss_dssp EEECSS-SEEE-EEEEE------------TTEEEEEEEET---TTCCEEECCCCCCSEEEEEECTTSSEEEEEETT----
T ss_pred EeeeEc-CCCe-EEEEE------------CCCceEEEEEC---CCCCceEecCCccceeeeEECCCCCEEEEECCC----
Confidence 357899 9874 66552 134667 6676 666667776444566789999999988776532
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeec-----CCcccEEEEEecCCCCCCCcceeE
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE-----NDEQIYILLNGRGFTPEGNIPFLD 398 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~-----~~~~~~l~~~~~g~~~~~~~~~l~ 398 (616)
..|+++|+.++ +.+.+...... .+ ..++|||||++|++..... ......++
T Consensus 400 ~~v~~~d~~tg--~~~~~~~~~~~-~v-----~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~---------------- 455 (1045)
T 1k32_A 400 FEIMTVDLETG--KPTVIERSREA-MI-----TDFTISDNSRFIAYGFPLKHGETDGYVMQAIH---------------- 455 (1045)
T ss_dssp SEEEEEETTTC--CEEEEEECSSS-CC-----CCEEECTTSCEEEEEEEECSSTTCSCCEEEEE----------------
T ss_pred CeEEEEECCCC--ceEEeccCCCC-Cc-----cceEECCCCCeEEEEecCccccccCCCCCeEE----------------
Confidence 27999999874 44444422111 11 1389999999988776422 00112233
Q ss_pred eeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEee
Q 007140 399 LFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 446 (616)
Q Consensus 399 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~s 446 (616)
.+|+++++...++... ..... ..|++||+++++...
T Consensus 456 l~d~~~g~~~~l~~~~-----~~~~~-------~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 456 VYDMEGRKIFAATTEN-----SHDYA-------PAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEETTTTEEEECSCSS-----SBEEE-------EEECTTSCEEEEEES
T ss_pred EEECCCCcEEEeeCCC-----cccCC-------ceEcCCCCEEEEEec
Confidence 4677777655553221 11111 358899998877654
No 30
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=9.6e-13 Score=129.57 Aligned_cols=270 Identities=14% Similarity=0.129 Sum_probs=166.5
Q ss_pred CCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccc
Q 007140 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (616)
Q Consensus 59 ~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 138 (616)
.....|+++++.+++.+.+..... . +..+.|||||+.|++..
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~-~----v~~~~~spdg~~l~~~~--------------------------------- 60 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPE-L----FEAPNWSPDGKYLLLNS--------------------------------- 60 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESS-C----CEEEEECTTSSEEEEEE---------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCc-c----eEeeEECCCCCEEEEEc---------------------------------
Confidence 345789999999998887765533 2 67899999999888841
Q ss_pred cccccCCCcccceeEeccceEEEEeC-C-CCeeecCCC---CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEE
Q 007140 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D-GTAKDFGTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (616)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~d~-~-g~~~~l~~~---~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (616)
...|+++|+ + ++...+... ..+..++|||||++|++...... ....||.
T Consensus 61 -----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------~~~~l~~ 114 (297)
T 2ojh_A 61 -----------------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---------GKSAIYL 114 (297)
T ss_dssp -----------------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---------SSCEEEE
T ss_pred -----------------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---------CcceEEE
Confidence 136788888 5 666665432 24567999999999999874321 1347899
Q ss_pred EeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE
Q 007140 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (616)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 293 (616)
+++.+++.+.+.... ....+.|+|||+. |++....++ .-.++.++. .+++...
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~-l~~~~~~~~---------~~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKS-FTYCGIRDQ---------VFDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSE-EEEEEEETT---------EEEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCE-EEEEECCCC---------ceEEEEEEC---CCCcceE
Confidence 998877766654411 1234789999984 555432211 124555555 5556666
Q ss_pred eccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007140 294 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (616)
Q Consensus 294 l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~ 373 (616)
+.........+.|+|||..+++.... .+..+||.+++.+ +..+.+...... . ..+.|+|||+.|++....
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~i~~~~~~~--~~~~~~~~~~~~--~-----~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSR-TGQMQIWRVRVDG--SSVERITDSAYG--D-----WFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECT-TSSCEEEEEETTS--SCEEECCCCSEE--E-----EEEEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecC-CCCccEEEECCCC--CCcEEEecCCcc--c-----CCeEECCCCCEEEEEEcC
Confidence 66555667789999999977665422 2456899999876 334444322111 0 128899999998887653
Q ss_pred cCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecC
Q 007140 374 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 448 (616)
Q Consensus 374 ~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~ 448 (616)
.+.... .......++.+|+++++...+...... ...+ ....|+++++.+++.....
T Consensus 238 ~~~~~~----------~~~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~-------~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVFDH----------PRDLDVRVQLMDMDGGNVETLFDLFGG--QGTM-------NSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCCSC----------CSSEEEEEEEEETTSCSCEEEEEEEES--TTTS-------CSCCBCTTSSEEEEEEECC
T ss_pred CCCCcc----------cccCceEEEEEecCCCCceeeeccCCC--Cccc-------ccceECCCCCEEEEEEecc
Confidence 210000 000001133578877776666432100 0001 1246899999888776543
No 31
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=3.2e-13 Score=137.26 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=142.7
Q ss_pred cceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCc
Q 007140 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (616)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (616)
...||+.++.. ++.++|. .+..|+|||||++|||++..+. .+..+||++++++|+.++++....
T Consensus 42 ~~~l~~~d~~~----~~~~~l~------~~~~~~~SpDg~~la~~~~~~~-----~~~~~l~~~~~~~g~~~~l~~~~~- 105 (347)
T 2gop_A 42 ENTIVIENLKN----NARRFIE------NATMPRISPDGKKIAFMRANEE-----KKVSEIWVADLETLSSKKILEAKN- 105 (347)
T ss_dssp EEEEEEEETTT----CCEEEEE------SCEEEEECTTSSEEEEEEEETT-----TTEEEEEEEETTTTEEEEEEEESE-
T ss_pred cceEEEEeCCC----CceEEcc------cCCCeEECCCCCEEEEEEeccC-----CCcceEEEEECCCCceEEEEcCCC-
Confidence 46799999864 7777771 4778999999999999986521 256789999999999988875432
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEe
Q 007140 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (616)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d 163 (616)
+..+.|||||+.|+|........ .. ...+.. +.+..+...+......+|+++|
T Consensus 106 -----~~~~~wspdg~~l~~~~~~~~~~------------------~~---~~~~~~-~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 106 -----IRSLEWNEDSRKLLIVGFKRRED------------------ED---FIFEDD-VPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp -----EEEEEECTTSSEEEEEEECCCC-------------------------------CCCC---------CEEEEEEEE
T ss_pred -----ccceeECCCCCEEEEEEccCCCc------------------CC---cEEEcc-cceeecCcccccCccceEEEEE
Confidence 56799999999999975321000 00 000000 1111121111111246899999
Q ss_pred C-CCCe-eecCCCCceeeeeECCCCcEEEEEeccCCCcccccCccc-CccEEEEeCCCceEEEecCCCCCCCCCccccCc
Q 007140 164 L-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARF-SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (616)
Q Consensus 164 ~-~g~~-~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (616)
+ +|+. ++|+.+ .+..+.||||| |+|+........ ... ..+||+++ +++.+.++..
T Consensus 159 ~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~----~~~~~~~l~~~d--~~~~~~l~~~------------- 216 (347)
T 2gop_A 159 TESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIP----QYFKFWDIYIWE--DGKEEKMFEK------------- 216 (347)
T ss_dssp TTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSSC----CSSCCEEEEEEE--TTEEEEEEEE-------------
T ss_pred CCCCeEEeeecCC-CcccccCCCCe--EEEEEecccccc----cccccccEEEeC--CCceEEeccC-------------
Confidence 9 5666 677653 55689999999 666654321100 001 24788999 5566665541
Q ss_pred cCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc-cccccc-eeecCCCceEEEeee
Q 007140 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRS-VSWCDDSLALVNETW 318 (616)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~-~~wspDg~~l~~~~~ 318 (616)
.....+||||+. |++....... .......+++++ +++.+.++.. ...... +.|+ || . ++...
T Consensus 217 ---~~~~~~spdg~~-l~~~~~~~~~----~~~~~~~l~~~d-----~~~~~~l~~~~~~~~~~~~~~s-dg-~-~~~~~ 280 (347)
T 2gop_A 217 ---VSFYAVDSDGER-ILLYGKPEKK----YMSEHNKLYIYD-----GKEVMGILDEVDRGVGQAKIKD-GK-V-YFTLF 280 (347)
T ss_dssp ---ESEEEEEECSSC-EEEEECCSSS----CCCSSCEEEEEC-----SSCEEESSTTCCSEEEEEEEET-TE-E-EEEEE
T ss_pred ---cceeeECCCCCE-EEEEEccccC----CccccceEEEEC-----CCceEeccccCCcccCCccEEc-Cc-E-EEEEe
Confidence 012334999985 6665321110 001123566654 2455666543 344554 8899 88 3 33322
Q ss_pred ccCccEEEEEEe
Q 007140 319 YKTSQTRTWLVC 330 (616)
Q Consensus 319 ~~~~~~~l~~~d 330 (616)
. .+..+|| ++
T Consensus 281 ~-~~~~~l~-~~ 290 (347)
T 2gop_A 281 E-EGSVNLY-IW 290 (347)
T ss_dssp E-TTEEEEE-EE
T ss_pred c-CCcEEEE-Ec
Confidence 2 2456899 88
No 32
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=7.1e-13 Score=148.60 Aligned_cols=278 Identities=10% Similarity=0.042 Sum_probs=161.7
Q ss_pred eeEEeecCCCCCCCCceeeecCC---CC--CcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYP---DG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~---~~--~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (616)
.||+++.. +++.+.|.+.. .+ ..+..++|||||++|||.+..+. +...+||++|+++|+..+++..
T Consensus 99 ~l~~~~~~----~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G-----~~~~~i~v~d~~tg~~~~~~~~ 169 (710)
T 2xdw_A 99 VLYVQDSL----EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG-----SDWVTIKFMKVDGAKELPDVLE 169 (710)
T ss_dssp EEEEESST----TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT-----CSCEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCC----CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCccccc
Confidence 57777654 36676664221 11 13678999999999999987521 2235999999999988775422
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEE
Q 007140 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (616)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (616)
.. .+..+.|||||+.|+|......... ..+. ... .....+||
T Consensus 170 ~~-----~~~~~~wspDg~~l~~~~~~~~~~~---------------~~~~--------------~~~----~~~~~~v~ 211 (710)
T 2xdw_A 170 RV-----KFSCMAWTHDGKGMFYNAYPQQDGK---------------SDGT--------------ETS----TNLHQKLY 211 (710)
T ss_dssp EE-----CSCCEEECTTSSEEEEEECCCCSSC---------------CSSS--------------CCC----CCCCCEEE
T ss_pred Cc-----ccceEEEEeCCCEEEEEEECCcccc---------------cccc--------------ccc----cCCCCEEE
Confidence 21 1467999999999999754321000 0000 000 00246799
Q ss_pred EEeC-CCCe--eec-CCC---CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC------c--eEEEec
Q 007140 161 LGSL-DGTA--KDF-GTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------K--LVRELC 225 (616)
Q Consensus 161 ~~d~-~g~~--~~l-~~~---~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~--~~~~l~ 225 (616)
++++ +++. +.+ ... .....+.|||||++|++....... ...+|+++|+.+ + +.+.|+
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD--------PVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS--------SCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC--------CccEEEEEECcccccccCCccceEEee
Confidence 9999 5542 233 221 234589999999999998753210 135899999875 4 455554
Q ss_pred CCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCC---ceEeccccc--c
Q 007140 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDL--R 300 (616)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~l~~~~~--~ 300 (616)
... ......|+|||+. |++....+ .....|+.++. .+++ .+.|..... .
T Consensus 284 ~~~--------------~~~~~~~s~dg~~-l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 284 DNF--------------EGEYDYVTNEGTV-FTFKTNRH--------SPNYRLINIDF---TDPEESKWKVLVPEHEKDV 337 (710)
T ss_dssp CSS--------------SSCEEEEEEETTE-EEEEECTT--------CTTCEEEEEET---TSCCGGGCEEEECCCSSCE
T ss_pred CCC--------------CcEEEEEeccCCE-EEEEECCC--------CCCCEEEEEeC---CCCCcccceeccCCCCCCe
Confidence 310 0112458999984 66652211 11235777776 5443 255554322 4
Q ss_pred ccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeec
Q 007140 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE 374 (616)
Q Consensus 301 ~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~ 374 (616)
...+.|++++..++... +.+..+||++++.++ ...+.|... ... . ..+.++++++.+++.....
T Consensus 338 ~~~~~~~~~~~lv~~~~--~~g~~~l~~~~~~~g-~~~~~l~~~-~~~-v-----~~~~~s~d~~~l~~~~ss~ 401 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYL--HDVKNTLQLHDLATG-ALLKIFPLE-VGS-V-----VGYSGQKKDTEIFYQFTSF 401 (710)
T ss_dssp EEEEEEETTTEEEEEEE--ETTEEEEEEEETTTC-CEEEEECCC-SSE-E-----EEEECCTTCSEEEEEEECS
T ss_pred EEEEEEEcCCEEEEEEE--ECCEEEEEEEECCCC-CEEEecCCC-Cce-E-----EEEecCCCCCEEEEEEeCC
Confidence 56688986655443332 235668999998553 122333211 100 0 1167788998888775543
No 33
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=2.1e-12 Score=144.37 Aligned_cols=274 Identities=12% Similarity=0.062 Sum_probs=159.5
Q ss_pred ceeEEeecCCCCCCCCceeeecCCC---C--CcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEeccc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPD---G--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~---~--~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~ 79 (616)
..||+++.. +++.++|+.... + ..+..++|||||++|||....+. +....|+++|+++|+..+...
T Consensus 94 ~~l~~~~~~----~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G-----~~~~~i~v~dl~tg~~~~~~~ 164 (695)
T 2bkl_A 94 AILYWRQGE----SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNA-----ADEAVLHVIDVDSGEWSKVDV 164 (695)
T ss_dssp CEEEEEEST----TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETT-----CSCCEEEEEETTTCCBCSSCC
T ss_pred EEEEEEcCC----CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCC-----CceEEEEEEECCCCCCcCCcc
Confidence 357877754 377888874322 1 13678999999999999987621 234799999999998641111
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceE
Q 007140 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (616)
Q Consensus 80 ~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (616)
.... ....+.|||||+.|+|...+.... +.. .+ . ....+|
T Consensus 165 ~~~~----~~~~~~wspDg~~l~~~~~d~~~~------------------~~~------~~-------~-----~~~~~v 204 (695)
T 2bkl_A 165 IEGG----KYATPKWTPDSKGFYYEWLPTDPS------------------IKV------DE-------R-----PGYTTI 204 (695)
T ss_dssp BSCC----TTCCCEECTTSSEEEEEECCCCTT------------------SCG------GG-------G-----GGGCEE
T ss_pred cCcc----cccceEEecCCCEEEEEEecCCCC------------------Ccc------cc-------C-----CCCCEE
Confidence 1111 136799999999999975322100 000 00 0 024679
Q ss_pred EEEeC-CCC--eeecCCC----CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC
Q 007140 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (616)
Q Consensus 160 ~~~d~-~g~--~~~l~~~----~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (616)
|++++ +++ .+.+... ..+..+.|||||++|++.+..... ..+||+++..+++.+.|....
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~---------~~~l~~~~~~~~~~~~l~~~~---- 271 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS---------ENDVYWKRPGEKDFRLLVKGV---- 271 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT---------EEEEEEECTTCSSCEEEEECS----
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC---------ceEEEEEcCCCCceEEeecCC----
Confidence 99999 554 2333322 245689999999999998765311 347999988766666665411
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc---eEeccc--cccccceeec
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKL--DLRFRSVSWC 307 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~l~~~--~~~~~~~~ws 307 (616)
.+...+.| +||+ +++....+ .....|+.++. ++++. +.+... ...+..+.|+
T Consensus 272 ---------~~~~~~~~-~~g~--l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 272 ---------GAKYEVHA-WKDR--FYVLTDEG--------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp ---------SCCEEEEE-ETTE--EEEEECTT--------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ---------CceEEEEe-cCCc--EEEEECCC--------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE
Confidence 01123445 6775 55442111 12346777776 55553 555533 2335567787
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeec
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE 374 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~ 374 (616)
++..++... .++..+||.+++++ ...+.+.-.... .. ..+.+++||+.+++.....
T Consensus 329 -~~~lv~~~~--~dg~~~l~~~~~~g--~~~~~l~~~~~~-~v-----~~~~~s~d~~~l~~~~ss~ 384 (695)
T 2bkl_A 329 -GGHLSLEYL--KDATSEVRVATLKG--KPVRTVQLPGVG-AA-----SNLMGLEDLDDAYYVFTSF 384 (695)
T ss_dssp -TTEEEEEEE--ETTEEEEEEEETTC--CEEEECCCSSSS-EE-----CCCBSCTTCSEEEEEEEET
T ss_pred -CCEEEEEEE--ECCEEEEEEEeCCC--CeeEEecCCCCe-EE-----EEeecCCCCCEEEEEEcCC
Confidence 444333322 23567899999865 222333111000 00 1267889999888776543
No 34
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=3.3e-11 Score=122.26 Aligned_cols=276 Identities=9% Similarity=-0.006 Sum_probs=160.2
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.|||||++|++....+.. ......|+++|+++++.......... ...+.|+|||+.|++...
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~----- 108 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRK---LDKGGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNT----- 108 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTT---TEESEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEET-----
T ss_pred CccceEECCCCCEEEEEcCCCcC---CCCCccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEec-----
Confidence 46788999999998665532100 01257899999999886554433221 457899999998777521
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecCCCC----------ceee
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPA----------VYTA 179 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~~~----------~~~~ 179 (616)
....|+++|+ +++. ..+.... ....
T Consensus 109 -------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 109 -------------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp -------------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred -------------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 0135667777 5543 2222111 1357
Q ss_pred eeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEE
Q 007140 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (616)
Q Consensus 180 ~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~ 259 (616)
+.|||||++|++..... ...|+++|..+++........ ......+.|+|||+. |+.
T Consensus 146 ~~~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~-l~~ 201 (353)
T 3vgz_A 146 LVADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNT------------GKMSTGLALDSEGKR-LYT 201 (353)
T ss_dssp EEEETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCC------------CTTCCCCEEETTTTE-EEE
T ss_pred EEECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCC------------CCccceEEECCCCCE-EEE
Confidence 89999999988886322 236999999866543322200 011235889999983 443
Q ss_pred EEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc-----cccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~-----~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
. . ..+.+++++. .+++....... ......+.|+|||..++..... ...|+++|+.++
T Consensus 202 ~-~-----------~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~ 263 (353)
T 3vgz_A 202 T-N-----------ADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---AAEVLVVDTRNG 263 (353)
T ss_dssp E-C-----------TTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---SSEEEEEETTTC
T ss_pred E-c-----------CCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---CCEEEEEECCCC
Confidence 3 1 1245666676 44444332211 1223457899999875544321 237999999873
Q ss_pred CCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecC
Q 007140 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (616)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (616)
+...... ... ...+.|++||+.+++..... ..+. .+|+.+++....+...
T Consensus 264 --~~~~~~~--~~~------~~~~~~s~dg~~l~v~~~~~----~~v~----------------~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 264 --NILAKVA--APE------SLAVLFNPARNEAYVTHRQA----GKVS----------------VIDAKSYKVVKTFDTP 313 (353)
T ss_dssp --CEEEEEE--CSS------CCCEEEETTTTEEEEEETTT----TEEE----------------EEETTTTEEEEEEECC
T ss_pred --cEEEEEE--cCC------CceEEECCCCCEEEEEECCC----CeEE----------------EEECCCCeEEEEEecC
Confidence 3222221 111 12388999999888765322 2233 3677777655443322
Q ss_pred CcccceeeEEeecCCCcccccccCCEEEEEeec
Q 007140 415 REKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (616)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss 447 (616)
..+.. ..+++|++.+++....
T Consensus 314 -----~~~~~-------~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 -----THPNS-------LALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----SEEEE-------EEECTTSCEEEEEEEC
T ss_pred -----CCCCe-------EEEcCCCCEEEEEEcc
Confidence 12222 3578898877766654
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.53 E-value=8.4e-11 Score=121.29 Aligned_cols=249 Identities=14% Similarity=0.055 Sum_probs=153.2
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
.|++.++.. ++..... ........+.|||||++|++.... ...|+++++.+++.........
T Consensus 13 ~v~v~d~~~----~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~---------d~~i~v~d~~~~~~~~~~~~~~--- 74 (391)
T 1l0q_A 13 NISVIDVTS----NKVTATI--PVGSNPMGAVISPDGTKVYVANAH---------SNDVSIIDTATNNVIATVPAGS--- 74 (391)
T ss_dssp EEEEEETTT----TEEEEEE--ECSSSEEEEEECTTSSEEEEEEGG---------GTEEEEEETTTTEEEEEEECSS---
T ss_pred EEEEEECCC----CeEEEEe--ecCCCcceEEECCCCCEEEEECCC---------CCeEEEEECCCCeEEEEEECCC---
Confidence 467777653 5544433 233347889999999998776532 3689999999888665543332
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-
Q 007140 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~- 164 (616)
.+..+.|+|||+.|++... ....|+++|+
T Consensus 75 --~v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d~~ 104 (391)
T 1l0q_A 75 --SPQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVIDTT 104 (391)
T ss_dssp --SEEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEETT
T ss_pred --CccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEECC
Confidence 2668999999998877521 0245778888
Q ss_pred CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCC
Q 007140 165 DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (616)
Q Consensus 165 ~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (616)
+++.. .+........++|||||++|+++.... ..|++||+.+++........ ..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~-------------~~ 159 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVG-------------RS 159 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEECC-------------SS
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecC-------------CC
Confidence 45433 333333456899999999998775432 37999998766543322210 11
Q ss_pred CCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCcc
Q 007140 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 244 ~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
...+.|+|||+. |+... .....+++++. .+++.............+.|+|||..++..... ...
T Consensus 160 ~~~~~~~~dg~~-l~~~~-----------~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~ 223 (391)
T 1l0q_A 160 PKGIAVTPDGTK-VYVAN-----------FDSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD-KYF 223 (391)
T ss_dssp EEEEEECTTSSE-EEEEE-----------TTTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEEC-SSC
T ss_pred cceEEECCCCCE-EEEEe-----------CCCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecC-cCC
Confidence 235789999973 43331 12245777786 544444333333445678999999876554321 112
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
..|+++|+.++ +.......... . ..+.|+|||+.+++...
T Consensus 224 ~~v~~~d~~~~--~~~~~~~~~~~-~------~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 224 NTVSMIDTGTN--KITARIPVGPD-P------AGIAVTPDGKKVYVALS 263 (391)
T ss_dssp CEEEEEETTTT--EEEEEEECCSS-E------EEEEECTTSSEEEEEET
T ss_pred CcEEEEECCCC--eEEEEEecCCC-c------cEEEEccCCCEEEEEcC
Confidence 37889999873 22222221110 0 12789999999877653
No 36
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.52 E-value=3e-13 Score=148.03 Aligned_cols=211 Identities=10% Similarity=0.036 Sum_probs=134.7
Q ss_pred CCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEEC--CCCceEecccCCCccccccccceEEe
Q 007140 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDICLNAVFGSFVWV 95 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~--~~g~~~~lt~~~~~~~~~~~~~~~ws 95 (616)
+|+.++++.... ..+..|.|||| +|+|.+..+. .+....||++++ .++. .+++.... .....||
T Consensus 53 ~g~~~~lt~~~~-~~~~~~~~spd--~~l~~~~~~~----g~~~~~l~~~~~~~~g~~-~~l~~~~~------~~~~~~s 118 (582)
T 3o4h_A 53 GGETVKLNREPI-NSVLDPHYGVG--RVILVRDVSK----GAEQHALFKVNTSRPGEE-QRLEAVKP------MRILSGV 118 (582)
T ss_dssp TTEEEECCSSCC-SEECEECTTCS--EEEEEEECST----TSCCEEEEEEETTSTTCC-EECTTSCS------BEEEEEE
T ss_pred CCCcEeeecccc-cccccccCCCC--eEEEEeccCC----CCcceEEEEEeccCCCcc-ccccCCCC------ceeeeeC
Confidence 488888885432 25789999999 7888876411 034578999998 5544 46654433 3356999
Q ss_pred cCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC
Q 007140 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP 174 (616)
Q Consensus 96 pdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~ 174 (616)
|||+.++|+... ...+.++|+ +|+.++|+..
T Consensus 119 ~dg~~~~~~s~~------------------------------------------------~~~~~l~d~~~g~~~~l~~~ 150 (582)
T 3o4h_A 119 DTGEAVVFTGAT------------------------------------------------EDRVALYALDGGGLRELARL 150 (582)
T ss_dssp ECSSCEEEEEEC------------------------------------------------SSCEEEEEEETTEEEEEEEE
T ss_pred CCCCeEEEEecC------------------------------------------------CCCceEEEccCCcEEEeecC
Confidence 999988775211 011224577 5677776543
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.. ..++|||||++|++.+..... ...|+++|+++++.+.|+.... ....+.|||||+
T Consensus 151 ~~-~~~~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~-------------~~~~~~~SpDG~ 207 (582)
T 3o4h_A 151 PG-FGFVSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEG-------------SFSSASISPGMK 207 (582)
T ss_dssp SS-CEEEEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSC-------------EEEEEEECTTSC
T ss_pred CC-ceEEECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCC-------------ccccceECCCCC
Confidence 33 679999999999988765321 2469999999887777765211 123589999998
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccccccccee--------ecCCCceEEEeeeccCccEEE
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVS--------WCDDSLALVNETWYKTSQTRT 326 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~--------wspDg~~l~~~~~~~~~~~~l 326 (616)
. |+ .. +. .....+++++. ++++.+.+.........+. ||||| .+++.... .+..+|
T Consensus 208 ~-l~-~~--~~-------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~-~g~~~l 271 (582)
T 3o4h_A 208 V-TA-GL--ET-------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARR-EGRSAV 271 (582)
T ss_dssp E-EE-EE--EC-------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEE-TTEEEE
T ss_pred E-EE-Ec--cC-------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEc-CCcEEE
Confidence 4 44 21 11 11136888888 7777763333344455677 99999 54444322 244567
Q ss_pred EEE
Q 007140 327 WLV 329 (616)
Q Consensus 327 ~~~ 329 (616)
|.+
T Consensus 272 ~~~ 274 (582)
T 3o4h_A 272 FID 274 (582)
T ss_dssp EET
T ss_pred EEE
Confidence 665
No 37
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=4.2e-12 Score=129.00 Aligned_cols=87 Identities=8% Similarity=-0.112 Sum_probs=57.0
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
.|++..+. ..+|+.+.++..........++|||||+ |+++... .....|+++++++|+.+++......
T Consensus 17 ~i~v~~~d--~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~-------~~~~~v~~~~~~~g~~~~~~~~~~~-- 84 (347)
T 3hfq_A 17 GIYQGTLD--TTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE-------DDEGGIAAWQIDGQTAHKLNTVVAP-- 84 (347)
T ss_dssp EEEEEEEE--TTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE-------TTEEEEEEEEEETTEEEEEEEEEEE--
T ss_pred CEEEEEEc--CCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec-------CCCceEEEEEecCCcEEEeeeeecC--
Confidence 46666663 2567776655333333567899999999 6665542 2357899999988887666532110
Q ss_pred cccccceEEecCCcEEEEE
Q 007140 86 NAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~ 104 (616)
......+.|+|||+.|++.
T Consensus 85 ~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCSEEEEETTTTEEEEE
T ss_pred CCCCEEEEECCCCCEEEEE
Confidence 1124578999999988775
No 38
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=6.5e-12 Score=141.46 Aligned_cols=277 Identities=12% Similarity=0.047 Sum_probs=155.1
Q ss_pred ceeEEeecCCCCCCCCceeeecCC---CC--CcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEeccc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYP---DG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~---~~--~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~ 79 (616)
..||+++.... .+++.++|.+.. .+ ..+..++|||||++|||.+..+. ....+||++|+++|+....+.
T Consensus 133 ~~l~~~~~~~~-~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G-----~e~~~i~v~dl~tg~~~~~~~ 206 (741)
T 1yr2_A 133 SQLLVRPADAP-VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG-----SDWRTVKFVGVADGKPLADEL 206 (741)
T ss_dssp CEEEEEETTSC-TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT-----CSEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEcCCcc-CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCCccC
Confidence 45777775300 136777764321 11 14678999999999999987621 223789999999998765421
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceE
Q 007140 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (616)
Q Consensus 80 ~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (616)
. . ..+..+.|||| +.|+|........ .+. .. +. ....+|
T Consensus 207 ~-~----~~~~~~~wspD-~~l~~~~~~~~~~-----------------~~~------~~-------~~-----~~~~~v 245 (741)
T 1yr2_A 207 K-W----VKFSGLAWLGN-DALLYSRFAEPKE-----------------GQA------FQ-------AL-----NYNQTV 245 (741)
T ss_dssp E-E----EESCCCEESTT-SEEEEEECCCC--------------------------------------C-----CCCCEE
T ss_pred C-C----ceeccEEEECC-CEEEEEEecCccc-----------------ccc------cc-------cC-----CCCCEE
Confidence 1 1 11357999999 9999974321100 000 00 00 023578
Q ss_pred EEEeC-CCC--eeecCCC----CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc--e-EEEecCCCC
Q 007140 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--L-VRELCDLPP 229 (616)
Q Consensus 160 ~~~d~-~g~--~~~l~~~----~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~-~~~l~~~~~ 229 (616)
|++++ ++. .+.+... .....+.|||||++|++....... ...+||++|++++ + .+.|....
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~l~~~~- 316 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD--------PVNTVHVARVTNGKIGPVTALIPDL- 316 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC--------SCCEEEEEEEETTEECCCEEEECSS-
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC--------CcceEEEEECCCCCCcccEEecCCC-
Confidence 88998 443 2333221 135689999999999998754310 1358999999866 4 55554311
Q ss_pred CCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCC--CceEecccc-ccccceee
Q 007140 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEILHKLD-LRFRSVSW 306 (616)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~-~~~~~~~w 306 (616)
......++|||+. |++....+ .....|+.++. +++ +.+.+.... .....+.|
T Consensus 317 -------------~~~~~~~~~dg~~-l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 317 -------------KAQWDFVDGVGDQ-LWFVSGDG--------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp -------------SSCEEEEEEETTE-EEEEECTT--------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEE
T ss_pred -------------CceEEEEeccCCE-EEEEECCC--------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEEEE
Confidence 0112235689874 65552211 11345777776 542 345554332 23345566
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~ 373 (616)
+ ++ .+++... .++..+||++++++ +..+.+.-..... . ..+.+++||+.+++....
T Consensus 372 ~-~~-~lv~~~~-~dg~~~l~~~~~~g--~~~~~l~~~~~~~-v-----~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 372 A-GN-RLFASYI-HDAKSQVLAFDLDG--KPAGAVSLPGIGS-A-----SGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp E-BT-EEEEEEE-ETTEEEEEEEETTS--CEEEECBCSSSCE-E-----EEEECCBTCSCEEEEEEE
T ss_pred E-CC-EEEEEEE-ECCEEEEEEEeCCC--CceeeccCCCCeE-E-----EEeecCCCCCEEEEEEcC
Confidence 6 33 3333322 23567899999865 2233332100000 0 126788899888776543
No 39
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=2.5e-11 Score=124.04 Aligned_cols=88 Identities=17% Similarity=0.145 Sum_probs=54.0
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
+|++..+. .++|+.++++.. .......++|||||++|++....+. ..+...+|.++.++|+.+++.......
T Consensus 28 ~i~~~~~d--~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~----~~~~v~~~~~~~~~g~~~~~~~~~~~~- 99 (361)
T 3scy_A 28 GIYTFRFN--EETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSK----DQAAVSAFAFDKEKGTLHLLNTQKTMG- 99 (361)
T ss_dssp EEEEEEEE--TTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSS----TTCEEEEEEEETTTTEEEEEEEEECSS-
T ss_pred CEEEEEEe--CCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCC----CCCcEEEEEEeCCCCcEEEeeEeccCC-
Confidence 67777773 367888888754 3334667799999999877764210 024556677777778877765432111
Q ss_pred cccccceEEecCCcEEEEE
Q 007140 86 NAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~ 104 (616)
.....+.+ ||+.|++.
T Consensus 100 -~~p~~~~~--dg~~l~~~ 115 (361)
T 3scy_A 100 -ADPCYLTT--NGKNIVTA 115 (361)
T ss_dssp -SCEEEEEE--CSSEEEEE
T ss_pred -CCcEEEEE--CCCEEEEE
Confidence 01223344 88877664
No 40
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.46 E-value=1.9e-11 Score=120.83 Aligned_cols=283 Identities=8% Similarity=0.067 Sum_probs=178.9
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...-.+++||++|+|.... ....||.++.++.+.++|+.. ..-.++++|++|+|+.......
T Consensus 16 ~n~g~~~~~g~~iy~~n~~--------d~~~ly~~~~dg~~~~~l~~~---------~~~~i~~~g~~Iyy~~~~~~~~- 77 (302)
T 3s25_A 16 YNAGLFCESDGEVFFSNTN--------DNGRLYAMNIDGSNIHKLSND---------TAMYINADKNYVYYVRNNNQKI- 77 (302)
T ss_dssp GGTTCEEEETTEEEEEEGG--------GTTEEEEEETTSCSCEEEEEE---------EEEEEEECSSEEEEEEECC----
T ss_pred ecceEEEEeCCEEEEEeCC--------CCceEEEEcCCCCCCEEccCC---------ceeeEEEcCCEEEEEECCCCcc-
Confidence 3445688999999997653 247899999999888999632 1235679999999974321100
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCCCCceeeeeECCCCcEEEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLI 191 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~~~~~~~~~SpDg~~i~~ 191 (616)
. . . . .+ ......|++++++| +.++|+... ...|+|+|++|+|
T Consensus 78 ---------------~-~-----~---~---------~~-~~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~ 120 (302)
T 3s25_A 78 ---------------T-S-----Q---T---------FF-SYDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYY 120 (302)
T ss_dssp ---------------------------C---------CS-SCCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEE
T ss_pred ---------------c-c-----c---c---------ee-ccCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEE
Confidence 0 0 0 0 00 01246899999976 666676542 2478999999999
Q ss_pred Eec-cCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCccc
Q 007140 192 TSM-HRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (616)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~ 270 (616)
+.. ... ...|++++++|...+.|+... ...++++|+ .|+|...
T Consensus 121 ~~~~~~~----------~~~Iy~~~~dGs~~~~lt~~~-----------------~~~~~~~g~-~iy~t~~-------- 164 (302)
T 3s25_A 121 LHYDTQT----------ATSLYRIRIDGEEKKKIKNHY-----------------LFTCNTSDR-YFYYNNP-------- 164 (302)
T ss_dssp EEESSSS----------CEEEEEEETTSCCCEEEESSC-----------------CCCSEEETT-EEEEECT--------
T ss_pred EeecCCC----------CceEEEEECCCCCeEEEeCCC-----------------ceEeeEECC-EEEEEeC--------
Confidence 962 111 347999999988888887621 133567787 4887621
Q ss_pred ccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeeccccccc
Q 007140 271 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 350 (616)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~ 350 (616)
....|++.++ +++..+.|.... ...+ +.|++..|++..+... .+|++++++++ ..++|+....
T Consensus 165 ---g~~~Iy~~~l---~g~~~~~l~~~~--~~~~-~~P~g~~iy~t~~~~~--~~I~~~~ldG~--~~~~Lt~~~~---- 227 (302)
T 3s25_A 165 ---KNGQLYRYDT---ASQSEALFYDCN--CYKP-VVLDDTNVYYMDVNRD--NAIVHVNINNP--NPVVLTEANI---- 227 (302)
T ss_dssp ---TTCCEEEEET---TTTEEEEEECSC--EEEE-EEEETTEEEEEEGGGT--TEEEEECSSSC--CCEECSCSCE----
T ss_pred ---CCceEEEEEC---CCCCEEEEeCCC--ccce-eeecCCEEEEEEcCCC--cEEEEEECCCC--CeEEEeCCCc----
Confidence 2346777777 766666665422 2234 4599988888765432 58999999984 4566643221
Q ss_pred CCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCC
Q 007140 351 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 430 (616)
Q Consensus 351 ~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 430 (616)
+.++++|+.|++..... ...|+ +++++....++|.... .
T Consensus 228 -------~~~~~~g~~Iy~~~~~~---~~~i~----------------~~~~DG~~r~~l~~~~-------~-------- 266 (302)
T 3s25_A 228 -------EHYNVYGSLIFYQRGGD---NPALC----------------VVKNDGTGFKELAKGE-------F-------- 266 (302)
T ss_dssp -------EEEEEETTEEEEEECSS---SCEEE----------------EEETTSCCCEEEEESC-------E--------
T ss_pred -------ceEEECCCEEEEEECCC---CcEEE----------------EEECCCCccEEeeCCc-------c--------
Confidence 55788899998864321 23344 6777666667775321 0
Q ss_pred cccccccCCEEEEEeecCCCCceEEEEeCCCCceeeee
Q 007140 431 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (616)
Q Consensus 431 ~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~Lt 468 (616)
..+++.++++.++..... .|+.+.+++...++|.
T Consensus 267 -~~i~i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 267 -CNINVTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp -EEEEECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred -ceEEEeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 123456688877764322 3888887665555553
No 41
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.44 E-value=1.9e-10 Score=115.75 Aligned_cols=257 Identities=8% Similarity=-0.044 Sum_probs=146.2
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce-EecccCCCcc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDIC 84 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~ 84 (616)
.|.+.++. +++.......... .. .+.|||||++|++... ....|+++++++++. .........
T Consensus 21 ~v~~~d~~----~~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~- 84 (331)
T 3u4y_A 21 RISFFSTD----TLEILNQITLGYD-FV-DTAITSDCSNVVVTSD---------FCQTLVQIETQLEPPKVVAIQEGQS- 84 (331)
T ss_dssp EEEEEETT----TCCEEEEEECCCC-EE-EEEECSSSCEEEEEES---------TTCEEEEEECSSSSCEEEEEEECSS-
T ss_pred eEEEEeCc----ccceeeeEEccCC-cc-eEEEcCCCCEEEEEeC---------CCCeEEEEECCCCceeEEecccCCC-
Confidence 45666654 3666555433332 34 8999999998777653 346999999998874 332222221
Q ss_pred ccccccc-eEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEe
Q 007140 85 LNAVFGS-FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (616)
Q Consensus 85 ~~~~~~~-~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d 163 (616)
... +.|+|||+.|+ +... .+ ....|+++|
T Consensus 85 ----~~~~~~~s~dg~~l~-~~~~---------------------~~------------------------~~~~i~v~d 114 (331)
T 3u4y_A 85 ----SMADVDITPDDQFAV-TVTG---------------------LN------------------------HPFNMQSYS 114 (331)
T ss_dssp ----CCCCEEECTTSSEEE-ECCC---------------------SS------------------------SSCEEEEEE
T ss_pred ----CccceEECCCCCEEE-EecC---------------------CC------------------------CcccEEEEE
Confidence 334 89999999887 4110 00 013688888
Q ss_pred C-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCcc-EEEEeCCC-ceEEEe--cCCCCCCCCCccc
Q 007140 164 L-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK-VQVWTTDG-KLVREL--CDLPPAEDIPVCY 237 (616)
Q Consensus 164 ~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~-l~~~d~~~-~~~~~l--~~~~~~~~~~~~~ 237 (616)
+ +++.. .+........++|||||++|++..... .. +.+|++.. +..... ...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~-------- 174 (331)
T 3u4y_A 115 FLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFISG-------- 174 (331)
T ss_dssp TTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEECS--------
T ss_pred CCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccccC--------
Confidence 8 55443 333333456899999999988775432 24 67777652 221111 00000
Q ss_pred cCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc---eEeccccccccceeecCCCceEE
Q 007140 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALV 314 (616)
Q Consensus 238 ~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~l~~~~~~~~~~~wspDg~~l~ 314 (616)
..+...+.|+|||+. |+... .....+.+++. .+++. ............+.|+|||+.++
T Consensus 175 ---~~~~~~~~~spdg~~-l~v~~-----------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 175 ---GTRPFNITFTPDGNF-AFVAN-----------LIGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp ---SSSEEEEEECTTSSE-EEEEE-----------TTTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred ---CCCccceEECCCCCE-EEEEe-----------CCCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEE
Confidence 111245889999973 44331 12345667776 55554 32223334556789999999755
Q ss_pred EeeeccCccEEEEEEeCCCCCCCceEEe--eccc--ccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 315 NETWYKTSQTRTWLVCPGSKDVAPRVLF--DRVF--ENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~~~~~~~l~--~~~~--~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.... ....|+++|+.++ +.+.+. .... .... ..+...++|+|||++|++...
T Consensus 237 v~~~---~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 237 VLTE---STVDVFNFNQLSG--TLSFVKSFGHGLLIDPRP-LFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp EECS---SEEEEEEEETTTT--EEEEEEEEECCCCCCCGG-GTTCCCEEECTTSSEEEEEET
T ss_pred EEEc---CCCEEEEEECCCC--ceeeecccccccccCCCC-cccccceEECCCCCEEEEecC
Confidence 4332 2236899999873 332231 1110 0000 000122699999999887763
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.40 E-value=3.7e-10 Score=113.53 Aligned_cols=294 Identities=10% Similarity=0.012 Sum_probs=157.1
Q ss_pred ceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 007140 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (616)
Q Consensus 35 ~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~ 114 (616)
++.|++++++++.+.. ....|.++|+++++........... . .+.|+|||+.|++...
T Consensus 2 ~~~~~~~~~~~~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~----~-~~~~s~dg~~l~~~~~-------- 59 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVEQ---------HLRRISFFSTDTLEILNQITLGYDF----V-DTAITSDCSNVVVTSD-------- 59 (331)
T ss_dssp -----CCCCEEEEEEG---------GGTEEEEEETTTCCEEEEEECCCCE----E-EEEECSSSCEEEEEES--------
T ss_pred ceeEcCCCCEEEEEec---------CCCeEEEEeCcccceeeeEEccCCc----c-eEEEcCCCCEEEEEeC--------
Confidence 5678888887555442 3468999999999876554433221 4 7899999998777521
Q ss_pred CcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe--eecCCCCceee-eeECCCCcEEE
Q 007140 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--KDFGTPAVYTA-VEPSPDQKYVL 190 (616)
Q Consensus 115 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~--~~l~~~~~~~~-~~~SpDg~~i~ 190 (616)
...+|+++|+ +++. ..+........ ++|||||++|+
T Consensus 60 ----------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 60 ----------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV 99 (331)
T ss_dssp ----------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred ----------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE
Confidence 1236888888 5553 33443333345 89999999998
Q ss_pred EEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCccc
Q 007140 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (616)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~ 270 (616)
...... ....|+++|+.+++....... ......+.|+|||+. |+.... +
T Consensus 100 -~~~~~~---------~~~~i~v~d~~~~~~~~~~~~-------------~~~~~~~~~spdg~~-l~~~~~-~------ 148 (331)
T 3u4y_A 100 -TVTGLN---------HPFNMQSYSFLKNKFISTIPI-------------PYDAVGIAISPNGNG-LILIDR-S------ 148 (331)
T ss_dssp -ECCCSS---------SSCEEEEEETTTTEEEEEEEC-------------CTTEEEEEECTTSSC-EEEEEE-T------
T ss_pred -EecCCC---------CcccEEEEECCCCCeEEEEEC-------------CCCccceEECCCCCE-EEEEec-C------
Confidence 433211 012799999986654332221 011235889999984 544321 1
Q ss_pred ccCCCce-eEeccCCCCCCCCce----EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCc-eEEeec
Q 007140 271 EVSPRDI-IYTQPAEPAEGEKPE----ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP-RVLFDR 344 (616)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~~g~~~----~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~-~~l~~~ 344 (616)
.+. +.+++.+ .++... ...........+.|+|||+.++..... . ..|+++|+.++ +. +.+...
T Consensus 149 ----~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~--~~v~v~d~~~~--~~~~~~~~~ 217 (331)
T 3u4y_A 149 ----SANTVRRFKID--ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-G--NSIGILETQNP--ENITLLNAV 217 (331)
T ss_dssp ----TTTEEEEEEEC--TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-T--TEEEEEECSST--TSCEEEEEE
T ss_pred ----CCceEEEEEEC--CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-C--CeEEEEECCCC--cccceeeec
Confidence 122 3433431 112221 111222334678899999865443322 1 26888898774 32 112111
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcc-cceeeE
Q 007140 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREK-YFETAV 423 (616)
Q Consensus 345 ~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~~~~ 423 (616)
.... .-..++|+|||+++++.... ...++ .+|+++++.+.+....... .....
T Consensus 218 ~~~~-----~~~~~~~spdg~~l~v~~~~----~~~i~----------------~~d~~~~~~~~~~~~~~~~~~~~~~- 271 (331)
T 3u4y_A 218 GTNN-----LPGTIVVSRDGSTVYVLTES----TVDVF----------------NFNQLSGTLSFVKSFGHGLLIDPRP- 271 (331)
T ss_dssp ECSS-----CCCCEEECTTSSEEEEECSS----EEEEE----------------EEETTTTEEEEEEEEECCCCCCCGG-
T ss_pred cCCC-----CCceEEECCCCCEEEEEEcC----CCEEE----------------EEECCCCceeeecccccccccCCCC-
Confidence 1100 01138999999998877532 12233 3677777765442111000 00000
Q ss_pred EeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCc
Q 007140 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (616)
Q Consensus 424 ~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~ 463 (616)
........|++|++++++.... -..+.++++.+..
T Consensus 272 --~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 272 --LFGANQMALNKTETKLFISANI---SRELKVFTISGKV 306 (331)
T ss_dssp --GTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCE
T ss_pred --cccccceEECCCCCEEEEecCC---CCcEEEEEecCCc
Confidence 0000113688999877665432 3568888876543
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.40 E-value=6.1e-10 Score=114.78 Aligned_cols=267 Identities=9% Similarity=0.011 Sum_probs=161.0
Q ss_pred CceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccc
Q 007140 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (616)
Q Consensus 60 ~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~ 139 (616)
....|+++++++++.......... ...+.|+|||+.|++...
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~--------------------------------- 51 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGSN-----PMGAVISPDGTKVYVANA--------------------------------- 51 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEEG---------------------------------
T ss_pred CCCEEEEEECCCCeEEEEeecCCC-----cceEEECCCCCEEEEECC---------------------------------
Confidence 347899999999876654433221 567899999998876511
Q ss_pred ccccCCCcccceeEeccceEEEEeC-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC
Q 007140 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (616)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (616)
....|.++|+ +++.. .+........++|||||++|++..... ..|+++|+.
T Consensus 52 ---------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------------~~v~v~d~~ 104 (391)
T 1l0q_A 52 ---------------HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS------------STLSVIDTT 104 (391)
T ss_dssp ---------------GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEETT
T ss_pred ---------------CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCC------------CEEEEEECC
Confidence 1246777888 56433 343334567899999999998885432 369999998
Q ss_pred CceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc
Q 007140 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (616)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~ 297 (616)
+++........ .....+.|+|||+. |++.. .....+++++. .+++.......
T Consensus 105 ~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~-----------~~~~~v~~~d~---~~~~~~~~~~~ 156 (391)
T 1l0q_A 105 SNTVAGTVKTG-------------KSPLGLALSPDGKK-LYVTN-----------NGDKTVSVINT---VTKAVINTVSV 156 (391)
T ss_dssp TTEEEEEEECS-------------SSEEEEEECTTSSE-EEEEE-----------TTTTEEEEEET---TTTEEEEEEEC
T ss_pred CCeEEEEEeCC-------------CCcceEEECCCCCE-EEEEe-----------CCCCEEEEEEC---CCCcEEEEEec
Confidence 76554332210 11235889999973 43331 12346777786 54444443333
Q ss_pred cccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeec--ccccccCCCCCCCeeeCCCCCEEEEEeeecC
Q 007140 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (616)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~ 375 (616)
......+.|+|||..++..... .+ .|+++|+.++ +....... ... .++|+++|+.+++......
T Consensus 157 ~~~~~~~~~~~dg~~l~~~~~~-~~--~v~~~d~~~~--~~~~~~~~~~~~~---------~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 157 GRSPKGIAVTPDGTKVYVANFD-SM--SISVIDTVTN--SVIDTVKVEAAPS---------GIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETT-TT--EEEEEETTTT--EEEEEEECSSEEE---------EEEECTTSSEEEEEEECSS
T ss_pred CCCcceEEECCCCCEEEEEeCC-CC--EEEEEECCCC--eEEEEEecCCCcc---------ceEECCCCCEEEEEecCcC
Confidence 3445678999999876443222 22 6888999873 22222221 111 2789999999887763111
Q ss_pred CcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEE
Q 007140 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 455 (616)
Q Consensus 376 ~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~ 455 (616)
...++ .+|+.+++......... .+.. ..++++++.+++..+. -..+.
T Consensus 223 --~~~v~----------------~~d~~~~~~~~~~~~~~-----~~~~-------~~~s~dg~~l~~s~~~---d~~v~ 269 (391)
T 1l0q_A 223 --FNTVS----------------MIDTGTNKITARIPVGP-----DPAG-------IAVTPDGKKVYVALSF---XNTVS 269 (391)
T ss_dssp --CCEEE----------------EEETTTTEEEEEEECCS-----SEEE-------EEECTTSSEEEEEETT---TTEEE
T ss_pred --CCcEE----------------EEECCCCeEEEEEecCC-----CccE-------EEEccCCCEEEEEcCC---CCEEE
Confidence 12232 35777765444433221 1111 3478888877665532 36799
Q ss_pred EEeCCCCceee
Q 007140 456 ILSWPLKKSSQ 466 (616)
Q Consensus 456 ~~~~~~~~~~~ 466 (616)
++++.+++..+
T Consensus 270 v~d~~~~~~~~ 280 (391)
T 1l0q_A 270 VIDTATNTITA 280 (391)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCcEEE
Confidence 99998876543
No 44
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.36 E-value=4e-10 Score=111.34 Aligned_cols=239 Identities=9% Similarity=0.030 Sum_probs=155.2
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccC----CCceeEEEEECCCCceEecccCC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVS----SCKLRVWIADAETGEAKPLFESP 81 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~----~~~~~l~v~~~~~g~~~~lt~~~ 81 (616)
.||-++.. ++..++|+. ...--++|+|++|+|+...+..+... .....|+.+++++++.++|+...
T Consensus 38 ~ly~~~~d----g~~~~~l~~------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~ 107 (302)
T 3s25_A 38 RLYAMNID----GSNIHKLSN------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP 107 (302)
T ss_dssp EEEEEETT----SCSCEEEEE------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC
T ss_pred eEEEEcCC----CCCCEEccC------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC
Confidence 36777653 356777772 22346799999999998652100000 02578999999999888886332
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEE
Q 007140 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (616)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (616)
...|++++++|+|+... . + ....|++
T Consensus 108 ---------~~~~s~~g~~Iy~~~~~--------------------~------------------~-------~~~~Iy~ 133 (302)
T 3s25_A 108 ---------CIYASLIGNYIYYLHYD--------------------T------------------Q-------TATSLYR 133 (302)
T ss_dssp ---------EEEEEEETTEEEEEEES--------------------S------------------S-------SCEEEEE
T ss_pred ---------ccEEEEeCCEEEEEeec--------------------C------------------C-------CCceEEE
Confidence 34789999999996200 0 0 1357999
Q ss_pred EeCCC-CeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCc
Q 007140 162 GSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (616)
Q Consensus 162 ~d~~g-~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (616)
++++| +.++|+.... ..++|+|++|+|+.... .+|++++++|+..+.|..-
T Consensus 134 ~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g~------------~~Iy~~~l~g~~~~~l~~~------------- 185 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPKN------------GQLYRYDTASQSEALFYDC------------- 185 (302)
T ss_dssp EETTSCCCEEEESSCC---CCSEEETTEEEEECTTT------------CCEEEEETTTTEEEEEECS-------------
T ss_pred EECCCCCeEEEeCCCc---eEeeEECCEEEEEeCCC------------ceEEEEECCCCCEEEEeCC-------------
Confidence 99977 6777775432 46789999999996522 3799999999887777541
Q ss_pred cCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeecc
Q 007140 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (616)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (616)
.....+.|+++. |+|....+ ...|+..++ +++..+.|++... +.|+|++..|++.....
T Consensus 186 ---~~~~~~~P~g~~-iy~t~~~~----------~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~ 244 (302)
T 3s25_A 186 ---NCYKPVVLDDTN-VYYMDVNR----------DNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGGD 244 (302)
T ss_dssp ---CEEEEEEEETTE-EEEEEGGG----------TTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECSS
T ss_pred ---CccceeeecCCE-EEEEEcCC----------CcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECCC
Confidence 111224588874 78873211 135777777 7777777765332 56899999887764322
Q ss_pred CccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
...|+.+++++. ..+.|..... ..++..+.+|||...
T Consensus 245 --~~~i~~~~~DG~--~r~~l~~~~~-----------~~i~i~~d~Iy~td~ 281 (302)
T 3s25_A 245 --NPALCVVKNDGT--GFKELAKGEF-----------CNINVTSQYVYFTDF 281 (302)
T ss_dssp --SCEEEEEETTSC--CCEEEEESCE-----------EEEEECSSEEEEEET
T ss_pred --CcEEEEEECCCC--ccEEeeCCcc-----------ceEEEeCCEEEEEEC
Confidence 258999999984 3455543321 334456777777753
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.35 E-value=6.4e-10 Score=112.66 Aligned_cols=253 Identities=11% Similarity=-0.028 Sum_probs=148.0
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc-
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL- 85 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~- 85 (616)
|++.++. +++....... ......+.|||||+++++... ....|+++|+++++............
T Consensus 71 v~~~d~~----~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~~~ 135 (353)
T 3vgz_A 71 VYRLDPV----TLEVTQAIHN--DLKPFGATINNTTQTLWFGNT---------VNSAVTAIDAKTGEVKGRLVLDDRKRT 135 (353)
T ss_dssp EEEECTT----TCCEEEEEEE--SSCCCSEEEETTTTEEEEEET---------TTTEEEEEETTTCCEEEEEESCCCCCC
T ss_pred EEEEcCC----CCeEEEEEec--CCCcceEEECCCCCEEEEEec---------CCCEEEEEeCCCCeeEEEEecCCCccc
Confidence 5666654 3555444322 224778999999998776653 34689999999988644433321110
Q ss_pred ----cccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEE
Q 007140 86 ----NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (616)
Q Consensus 86 ----~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (616)
......+.|+|||++|++.... ....|++
T Consensus 136 ~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------------------~~~~i~~ 168 (353)
T 3vgz_A 136 EEVRPLQPRELVADDATNTVYISGIG-----------------------------------------------KESVIWV 168 (353)
T ss_dssp SSCCCCEEEEEEEETTTTEEEEEEES-----------------------------------------------SSCEEEE
T ss_pred cccCCCCCceEEECCCCCEEEEEecC-----------------------------------------------CCceEEE
Confidence 0012458999999987774110 1246888
Q ss_pred EeC-CCCee-ecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCcccc
Q 007140 162 GSL-DGTAK-DFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (616)
Q Consensus 162 ~d~-~g~~~-~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (616)
+|+ +++.. .+. .......++|||||++|++.... ..++++|+.+++............
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~~------ 229 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD-------------GELITIDTADNKILSRKKLLDDGK------ 229 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT-------------SEEEEEETTTTEEEEEEECCCSSS------
T ss_pred EcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC-------------CeEEEEECCCCeEEEEEEcCCCCC------
Confidence 888 55443 344 23335678999999998887431 368899988765443222110000
Q ss_pred CccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeee
Q 007140 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW 318 (616)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (616)
......+.|+|||+. |+.. . ...+.+++++. .+++......... ...+.|+|||..++....
T Consensus 230 --~~~~~~~~~s~dg~~-l~~~-~----------~~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 230 --EHFFINISLDTARQR-AFIT-D----------SKAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp --CCCEEEEEEETTTTE-EEEE-E----------SSSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEET
T ss_pred --CcccceEEECCCCCE-EEEE-e----------CCCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEEC
Confidence 001124789999983 4333 1 12246777776 5555443322222 245899999986544332
Q ss_pred ccCccEEEEEEeCCCCCCCceEEee--cccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 319 YKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
. . ..|+++|+.++ +...... ..... ++|++||+.+++...
T Consensus 292 ~-~--~~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 292 Q-A--GKVSVIDAKSY--KVVKTFDTPTHPNS---------LALSADGKTLYVSVK 333 (353)
T ss_dssp T-T--TEEEEEETTTT--EEEEEEECCSEEEE---------EEECTTSCEEEEEEE
T ss_pred C-C--CeEEEEECCCC--eEEEEEecCCCCCe---------EEEcCCCCEEEEEEc
Confidence 2 1 27899999873 2222221 11222 889999998887654
No 46
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.34 E-value=8.5e-10 Score=111.08 Aligned_cols=260 Identities=13% Similarity=0.080 Sum_probs=134.9
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECC--CCceEecccCCCcc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDIC 84 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~--~g~~~~lt~~~~~~ 84 (616)
|++.++.. +|+.+.+..+........+.|||||++|++.... ...|.+++++ +|+.+.+......
T Consensus 17 v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 17 IHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP---------EFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT---------TTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEEECC---CCcEEEeeeEecCCCCceEEECCCCCEEEEeecC---------CCeEEEEEecCCCCceeeccccccC-
Confidence 45555532 3544444433333357789999999998876532 2455555554 7776655322211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC
Q 007140 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (616)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~ 164 (616)
.....+.|+|||+.|++.... ...|.++++
T Consensus 84 --~~~~~~~~s~dg~~l~~~~~~------------------------------------------------~~~i~~~d~ 113 (343)
T 1ri6_A 84 --GSLTHISTDHQGQFVFVGSYN------------------------------------------------AGNVSVTRL 113 (343)
T ss_dssp --SCCSEEEECTTSSEEEEEETT------------------------------------------------TTEEEEEEE
T ss_pred --CCCcEEEEcCCCCEEEEEecC------------------------------------------------CCeEEEEEC
Confidence 125678999999988775210 123444444
Q ss_pred -CCC---ee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC-ceEEEec--CCCCCCCCCcc
Q 007140 165 -DGT---AK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELC--DLPPAEDIPVC 236 (616)
Q Consensus 165 -~g~---~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~--~~~~~~~~~~~ 236 (616)
++. .. .+........++|||||++|++..... ..+.+|++.. ++...+. ......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~----- 176 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------------DRICLFTVSDDGHLVAQDPAEVTTVE----- 176 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------------TEEEEEEECTTSCEEEEEEEEEECST-----
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCC------------CEEEEEEecCCCceeeecccccccCC-----
Confidence 331 11 122223456789999999998775322 3688888875 5443222 110000
Q ss_pred ccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEec---ccc------ccccceeec
Q 007140 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH---KLD------LRFRSVSWC 307 (616)
Q Consensus 237 ~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~---~~~------~~~~~~~ws 307 (616)
......+.|+|||+. |+... ...+.+.+++.+. .+++...+. ... .....+.|+
T Consensus 177 ----~~~~~~~~~~pdg~~-l~~~~-----------~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 177 ----GAGPRHMVFHPNEQY-AYCVN-----------ELNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp ----TCCEEEEEECTTSSE-EEEEE-----------TTTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred ----CCCcceEEECCCCCE-EEEEe-----------CCCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEEC
Confidence 011235789999973 44331 1123455555411 223332211 111 112358899
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
|||+.++.... ..+ .|.+++++...+..+.+........ -..++|++||+.|++..
T Consensus 240 ~dg~~l~v~~~-~~~--~i~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 240 PDGRHLYACDR-TAS--LITVFSVSEDGSVLSKEGFQPTETQ-----PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp TTSSEEEEEET-TTT--EEEEEEECTTSCCEEEEEEEECSSS-----CCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEec-CCC--EEEEEEEcCCCCceEEeeeecCCCc-----cceEEECCCCCEEEEec
Confidence 99987654332 223 4555555521122233321111110 11389999999888775
No 47
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.34 E-value=9.5e-10 Score=110.43 Aligned_cols=265 Identities=11% Similarity=0.011 Sum_probs=145.7
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCC-cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~-~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (616)
.|++.++.. ++......++... ....++|||||++|++... ....|+++|+.+++...........
T Consensus 12 ~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 12 KLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---------KSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---------TTTEEEEEETTTCCEEEEEECCBTT
T ss_pred eEEEEECCC----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC---------CCCeEEEEECCCCCeEeeEEcCCcc
Confidence 466777643 5544433233311 2678999999998877653 3468999999988765432222100
Q ss_pred -ccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEe
Q 007140 85 -LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (616)
Q Consensus 85 -~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d 163 (616)
.......+.|+|||+.|++..... +. . .+. .. ....+|+++|
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~---------------------~~------~-------~~~--~~-~~~~~i~v~d 121 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPV---------------------RL------E-------LTH--FE-VQPTRVALYD 121 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEE---------------------EE------C-------SSC--EE-ECCCEEEEEE
T ss_pred cccccccceEECCCCCEEEEEeccc---------------------cc------c-------ccc--cc-ccCceEEEEE
Confidence 001245789999999888752100 00 0 000 00 0136789999
Q ss_pred C-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCcc
Q 007140 164 L-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (616)
Q Consensus 164 ~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (616)
+ +++.. .+..+.....++|||||++|++.. ..++++|+.+++.........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~------------ 174 (337)
T 1pby_B 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQS------------ 174 (337)
T ss_dssp TTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTT------------
T ss_pred CCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeeccc------------
Confidence 9 55433 343333456789999999998872 158999998765543222110
Q ss_pred CCCCcceeecCCCceEEEEEeecCC-------------CcccccCCCceeEeccCCCCCCCCceEec--cccccccceee
Q 007140 242 EGMRSISWRADKPSTLYWVEAQDRG-------------DANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSW 306 (616)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~-------------~~~~~~~~~~~~~~~~~~~~~~g~~~~l~--~~~~~~~~~~w 306 (616)
......|+|||+. |+.. ..... ...........+++++. .+++...+. ........+.|
T Consensus 175 -~~~~~~~s~dg~~-l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 175 -WEAETYAQPDVLA-VWNQ-HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL---ETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp -TTTTTBCCCBCCC-CCCC-CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEE
T ss_pred -cCCCceeCCCccE-Eeee-ccCCCceeeeeeccccccccccccccccceEEEeC---CCCCceEeecCCCCCceeeEEE
Confidence 0123467888763 3211 00000 00000001114566676 555544322 11223445899
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee--cccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
+|||+.++... ..|+++|+.++ +...... .... .++|+|||+++++.
T Consensus 249 s~dg~~l~~~~------~~v~~~d~~~~--~~~~~~~~~~~~~---------~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 249 NPAKTRAFGAY------NVLESFDLEKN--ASIKRVPLPHSYY---------SVNVSTDGSTVWLG 297 (337)
T ss_dssp CTTSSEEEEEE------SEEEEEETTTT--EEEEEEECSSCCC---------EEEECTTSCEEEEE
T ss_pred CCCCCEEEEeC------CeEEEEECCCC--cCcceecCCCcee---------eEEECCCCCEEEEE
Confidence 99998765542 27999999873 2222221 1111 28999999988875
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.31 E-value=4e-09 Score=110.20 Aligned_cols=248 Identities=11% Similarity=0.011 Sum_probs=141.9
Q ss_pred CCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCc-cccccccceEEecC
Q 007140 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-CLNAVFGSFVWVNN 97 (616)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~-~~~~~~~~~~wspd 97 (616)
+..+.+..++.......++||| +..+++... ....|+++++++|+..+....... .-...+..+.|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~---------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFID-NTRLAIPLL---------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESS-SSEEEEEBT---------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred CcceEEEEEcCCCCceEEEEeC-CCeEEEEeC---------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 4334444333333466899999 666676653 235699999999887664322100 00112457889988
Q ss_pred CcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CC
Q 007140 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TP 174 (616)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~ 174 (616)
++.++... ....|+++|+ +++. ..+. ..
T Consensus 181 ~~~~~s~~-------------------------------------------------~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 181 NELWVSQM-------------------------------------------------QANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp TEEEEEEG-------------------------------------------------GGTEEEEEETTTCCEEEEEECSS
T ss_pred CEEEEEEC-------------------------------------------------CCCEEEEEECCCceEEEEEcCCC
Confidence 88554421 1245777787 4443 3333 23
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.....++|+|||+.+++..... ..|.+||+.+++....... ......+.|+|||+
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~-------------~~~~~~~~~~~~g~ 266 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWIS------------EDISVIDRKTKLEIRKTDK-------------IGLPRGLLLSKDGK 266 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTT------------TEEEEEETTTTEEEEECCC-------------CSEEEEEEECTTSS
T ss_pred CCeeEEEEcCCCCEEEEEecCC------------CcEEEEECCCCcEEEEecC-------------CCCceEEEEcCCCC
Confidence 3566899999999998775332 3689999876654332211 01123588999997
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
. |+... .+.+... .....+++++. .+++.............+.|+||+..++.....+ + .|+++|+.++
T Consensus 267 ~-l~~~~-~~~~~~~---~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~-~--~v~v~d~~~~ 335 (433)
T 3bws_A 267 E-LYIAQ-FSASNQE---SGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC-S--KIEVYDLKEK 335 (433)
T ss_dssp E-EEEEE-EESCTTC---SCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT-T--EEEEEETTTT
T ss_pred E-EEEEE-CCCCccc---cCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecCC-C--EEEEEECCCC
Confidence 3 44332 1111000 12346777786 5444443333334556789999997654443222 2 6888888863
Q ss_pred CCCceEEeec--ccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 335 DVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 335 ~~~~~~l~~~--~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
+....... .+. .++|+|+|+.+++...
T Consensus 336 --~~~~~~~~~~~~~---------~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 336 --KVQKSIPVFDKPN---------TIALSPDGKYLYVSCR 364 (433)
T ss_dssp --EEEEEEECSSSEE---------EEEECTTSSEEEEEEC
T ss_pred --cEEEEecCCCCCC---------eEEEcCCCCEEEEEec
Confidence 22222221 122 2889999998887764
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.27 E-value=3.3e-09 Score=107.46 Aligned_cols=299 Identities=10% Similarity=0.006 Sum_probs=148.0
Q ss_pred CCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccc
Q 007140 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (616)
Q Consensus 59 ~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 138 (616)
++...||.+|.++|+...+...... .....+.|||||+ |+++... +
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~----------------------~-------- 60 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKE----------------------D-------- 60 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEE----------------------T--------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEec----------------------C--------
Confidence 3456788888888887665422211 1145789999999 6664210 0
Q ss_pred cccccCCCcccceeEeccceEEEEeC-CCCeeecCC----CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEE
Q 007140 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT----PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (616)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~----~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (616)
....|+++++ +|+.+.+.. ......++|||||++|++..... ..+.+
T Consensus 61 ----------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------------~~v~v 112 (347)
T 3hfq_A 61 ----------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------------GTAEV 112 (347)
T ss_dssp ----------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred ----------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------------CEEEE
Confidence 1246777777 555444432 22345789999999998886332 35777
Q ss_pred EeCC-CceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCC-CCCc
Q 007140 214 WTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKP 291 (616)
Q Consensus 214 ~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 291 (616)
|++. .+..+.+.........|. ..........+.|+|||+ ++... ...+.+.+++. . +|+.
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~--l~v~~-----------~~~~~v~~~~~---~~~g~~ 175 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR--LAVID-----------LGSDKVYVYNV---SDAGQL 175 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC--EEEEE-----------TTTTEEEEEEE---CTTSCE
T ss_pred EEeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc--EEEEe-----------CCCCEEEEEEE---CCCCcE
Confidence 7764 334333332111100000 000000112478999998 44331 11234555565 3 3443
Q ss_pred eEecc----ccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecc-cccccCC-CCCCCeeeCCCCC
Q 007140 292 EILHK----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSD-PGSPMMTRTSTGT 365 (616)
Q Consensus 292 ~~l~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~-~g~~~~~~s~dgk 365 (616)
..+.. .......+.|+|||+.++.... ..+...+|.++..+ ++.+.+.... ....+.. .+...++|+|||+
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE-LSSQIASLKYDTQT--GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEET-TTTEEEEEEEETTT--TEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeC-CCCEEEEEEecCCC--CceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 33221 1123345799999986554332 22333455555433 2222221110 0000000 0001278999999
Q ss_pred EEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecC-CCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEE
Q 007140 366 NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 444 (616)
Q Consensus 366 ~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~ 444 (616)
+|++..... ....+| +++ .|..+.+...... ...+. ...|++|++++++.
T Consensus 253 ~l~v~~~~~--~~v~v~------------------~~~~~g~~~~~~~~~~~--~~~~~-------~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 253 FLYVSNRGY--NTLAVF------------------AVTADGHLTLIQQISTE--GDFPR-------DFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEEEETT--TEEEEE------------------EECGGGCEEEEEEEECS--SSCCC-------EEEECTTSSEEEEE
T ss_pred EEEEEeCCC--CEEEEE------------------EECCCCcEEEeEEEecC--CCCcC-------eEEECCCCCEEEEE
Confidence 988776422 122332 332 2333333111100 00111 13578999877654
Q ss_pred eecCCCCceEEEEeCCCCceeeeee
Q 007140 445 KESKTEITQYHILSWPLKKSSQITN 469 (616)
Q Consensus 445 ~ss~~~p~~l~~~~~~~~~~~~Lt~ 469 (616)
.. ....-.+|.++.++|+++++..
T Consensus 304 ~~-~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 304 NQ-NTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp ET-TTTEEEEEEECTTTCCEEEEEE
T ss_pred Ec-CCCcEEEEEEeCCCCeEEeccc
Confidence 43 3333446666877888776654
No 50
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.26 E-value=6.5e-09 Score=104.25 Aligned_cols=276 Identities=11% Similarity=0.042 Sum_probs=151.4
Q ss_pred ceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccc
Q 007140 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (616)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (616)
...|+++|+.+++........... .....+.|+|||+.|++...
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~---------------------------------- 53 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVN---------------------------------- 53 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEET----------------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeC----------------------------------
Confidence 478999999988765443332200 01467899999998777521
Q ss_pred cccCCCcccceeEeccceEEEEeC-CCCee-ecCCCC------ceeeeeECCCCcEEEEEeccCCCcccccCcc-cCccE
Q 007140 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCAR-FSQKV 211 (616)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~~------~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~-~~~~l 211 (616)
....|+++|+ +++.. .+.... ....++|||||++|++......... .+.. ....|
T Consensus 54 --------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~--~~~~~~~~~i 117 (337)
T 1pby_B 54 --------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL--THFEVQPTRV 117 (337)
T ss_dssp --------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS--SCEEECCCEE
T ss_pred --------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc--ccccccCceE
Confidence 0246778887 55533 333221 3457899999999988852200000 0000 12579
Q ss_pred EEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc
Q 007140 212 QVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP 291 (616)
Q Consensus 212 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~ 291 (616)
+++|+.+++........ .....+.|+|||+. |+.. ...+++++. .+++.
T Consensus 118 ~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~--------------~~~i~~~d~---~~~~~ 166 (337)
T 1pby_B 118 ALYDAETLSRRKAFEAP-------------RQITMLAWARDGSK-LYGL--------------GRDLHVMDP---EAGTL 166 (337)
T ss_dssp EEEETTTTEEEEEEECC-------------SSCCCEEECTTSSC-EEEE--------------SSSEEEEET---TTTEE
T ss_pred EEEECCCCcEEEEEeCC-------------CCcceeEECCCCCE-EEEe--------------CCeEEEEEC---CCCcE
Confidence 99999876543322110 11245789999984 4433 134666676 54444
Q ss_pred eEeccccccccceeecCCCceEEEeeeccC--------------------ccEEEEEEeCCCCCCCceEEeecccccccC
Q 007140 292 EILHKLDLRFRSVSWCDDSLALVNETWYKT--------------------SQTRTWLVCPGSKDVAPRVLFDRVFENVYS 351 (616)
Q Consensus 292 ~~l~~~~~~~~~~~wspDg~~l~~~~~~~~--------------------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~ 351 (616)
..............|+|||..++....... ....|+++|+.++ +...+.-.....
T Consensus 167 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~--- 241 (337)
T 1pby_B 167 VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG--EMAMREVRIMDV--- 241 (337)
T ss_dssp EEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC--CEEEEEEEECSS---
T ss_pred eeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC--CceEeecCCCCC---
Confidence 332222221234578999876433221100 1116889999873 333221100000
Q ss_pred CCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCc
Q 007140 352 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 431 (616)
Q Consensus 352 ~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 431 (616)
....++|+|||+++++.. + .++ .+|+++++....+.... .+..
T Consensus 242 --~~~~~~~s~dg~~l~~~~------~-~v~----------------~~d~~~~~~~~~~~~~~-----~~~~------- 284 (337)
T 1pby_B 242 --FYFSTAVNPAKTRAFGAY------N-VLE----------------SFDLEKNASIKRVPLPH-----SYYS------- 284 (337)
T ss_dssp --CEEEEEECTTSSEEEEEE------S-EEE----------------EEETTTTEEEEEEECSS-----CCCE-------
T ss_pred --ceeeEEECCCCCEEEEeC------C-eEE----------------EEECCCCcCcceecCCC-----ceee-------
Confidence 001278999999988762 1 233 36777776544432211 1111
Q ss_pred ccccccCCEEEEEeecCCCCceEEEEeCCCCcee
Q 007140 432 EDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (616)
Q Consensus 432 ~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~ 465 (616)
..+++++++++.. . ....|.++++++++..
T Consensus 285 ~~~s~dg~~l~~~-~---~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 285 VNVSTDGSTVWLG-G---ALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEECTTSCEEEEE-S---BSSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEE-c---CCCcEEEEECcCCcEE
Confidence 3578888877654 2 2477999999887754
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=1.9e-08 Score=100.80 Aligned_cols=222 Identities=10% Similarity=0.009 Sum_probs=135.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|+|||+.|+.... ...|.++++.+++...+...... ...+..+.|+|+++.|+....
T Consensus 99 ~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~----- 161 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGE----------ASTLSIWDLAAPTPRIKAELTSS--APACYALAISPDSKVCFSCCS----- 161 (337)
T ss_dssp BEEEEEECTTSSEEEEEES----------SSEEEEEECCCC--EEEEEEECS--SSCEEEEEECTTSSEEEEEET-----
T ss_pred cEEEEEEcCCCCEEEEEcC----------CCcEEEEECCCCCcceeeecccC--CCceEEEEECCCCCEEEEEeC-----
Confidence 5788999999998887653 35788889988763222211110 112567899999998776411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCC-CCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT-PAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~-~~~~~~~~~SpDg~~ 188 (616)
...+.++|+ +++ ...+.. ...+..++|+||++.
T Consensus 162 --------------------------------------------dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 162 --------------------------------------------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp --------------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred --------------------------------------------CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCE
Confidence 134666677 443 333432 335678999999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|+....+ ..+.+||+..++.......+ .....+.|+|+++. |+.. .
T Consensus 198 l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~-l~~~-~------ 243 (337)
T 1gxr_A 198 LWTGGLD-------------NTVRSWDLREGRQLQQHDFT-------------SQIFSLGYCPTGEW-LAVG-M------ 243 (337)
T ss_dssp EEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECTTSSE-EEEE-E------
T ss_pred EEEEecC-------------CcEEEEECCCCceEeeecCC-------------CceEEEEECCCCCE-EEEE-c------
Confidence 8877643 36889998866543322210 11235889999973 3322 1
Q ss_pred ccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee--ccc
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVF 346 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~ 346 (616)
....+.+++. ..++...+.........+.|+||+..|+.... ++ .|.++++.++ +...... ..+
T Consensus 244 -----~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg--~i~~~~~~~~--~~~~~~~~~~~v 309 (337)
T 1gxr_A 244 -----ESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK--DN--LLNAWRTPYG--ASIFQSKESSSV 309 (337)
T ss_dssp -----TTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEET--TS--EEEEEETTTC--CEEEEEECSSCE
T ss_pred -----CCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEecC--CC--cEEEEECCCC--eEEEEecCCCcE
Confidence 1234666676 54455555555566778999999998766542 23 5777888763 2222221 112
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 347 ENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 347 ~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
. .+.|+++|+.++...
T Consensus 310 ~---------~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 310 L---------SCDISVDDKYIVTGS 325 (337)
T ss_dssp E---------EEEECTTSCEEEEEE
T ss_pred E---------EEEECCCCCEEEEec
Confidence 2 278999999876654
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.19 E-value=3.3e-08 Score=100.28 Aligned_cols=307 Identities=8% Similarity=0.012 Sum_probs=162.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..++|||||+.|+.... ...|.++++.+++........... +..+.|+||++.|+....
T Consensus 34 ~v~~~~~s~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~----- 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSK----------DSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCFTKYCVTGSA----- 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEES----------SSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred eEEEEEEcCCCCEEEEEeC----------CCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCCCCEEEEEeC-----
Confidence 5889999999998887642 257888899888765443322222 668999999998876411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecCCCCceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~~~~~~~~~~SpDg~~i 189 (616)
...|.++|+ +++. ..+.....+..+.|+|+++.|
T Consensus 95 --------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 95 --------------------------------------------DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp --------------------------------------------TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEE
T ss_pred --------------------------------------------CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEE
Confidence 135667777 4543 333444456789999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccC--CCCcceeecCCCceEEEEEeecCC
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVRE--GMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~--~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
+....... .....+.+|++..+. ...+...... .. ........ ....+.|+|+++. |+..
T Consensus 131 ~~~~~~~~--------~~~g~i~~~d~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-l~~~------ 193 (369)
T 3zwl_B 131 LAILDNVM--------KNPGSINIYEIERDSATHELTKVSEE-PI-HKIITHEGLDAATVAGWSTKGKY-IIAG------ 193 (369)
T ss_dssp EEEECCBT--------TBCCEEEEEEEEECTTTCCEEEECSS-CS-EEEECCTTCCCEEEEEECGGGCE-EEEE------
T ss_pred EEecCCcc--------CCCCEEEEEEecCCccceeecccccc-ee-eeccCCcCccceeEEEEcCCCCE-EEEE------
Confidence 88865310 012367777765321 1111000000 00 00000000 1235789999873 3222
Q ss_pred CcccccCCCceeEeccCCCCCC-CCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeec
Q 007140 267 DANVEVSPRDIIYTQPAEPAEG-EKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 344 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~-g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 344 (616)
.....+.+++. .. ++.. .+......+..+.|+||+..|+.... ++ .|.++|+.+. +....+..
T Consensus 194 ------~~dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~--~i~v~d~~~~--~~~~~~~~ 258 (369)
T 3zwl_B 194 ------HKDGKISKYDV---SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR--DT--NSFLVDVSTL--QVLKKYET 258 (369)
T ss_dssp ------ETTSEEEEEET---TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET--TS--EEEEEETTTC--CEEEEEEC
T ss_pred ------cCCCEEEEEEC---CCCcEeEEEEecCCCceeEEEECCCCCEEEEecC--Cc--eEEEEECCCC--ceeeeecC
Confidence 12245666676 33 2222 23334456778999999988766542 12 6888888773 32222221
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEE
Q 007140 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (616)
Q Consensus 345 ~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (616)
.. .. ..+.|+|+|+.+++..... ...++... .......+..+|+.+++......... ..+..
T Consensus 259 ~~--~~-----~~~~~~~~~~~l~~~~~~~---~~~~~~~~----~~~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~ 320 (369)
T 3zwl_B 259 DC--PL-----NTAVITPLKEFIILGGGQE---AKDVTTTS----ANEGKFEARFYHKIFEEEIGRVQGHF----GPLNT 320 (369)
T ss_dssp SS--CE-----EEEEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCS----SCEEE
T ss_pred CC--Cc-----eeEEecCCCceEEEeecCC---CceEEEEe----cCCCcceeEEEecCCCcchhheeccc----CcEEE
Confidence 11 00 1288999999888765422 22222111 01111223345666665444433221 12222
Q ss_pred eecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCC
Q 007140 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (616)
Q Consensus 425 ~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~ 462 (616)
..|+++++.++. .+. -..|.+.++..+
T Consensus 321 -------~~~s~~~~~l~s-~~~---dg~v~iw~~~~~ 347 (369)
T 3zwl_B 321 -------VAISPQGTSYAS-GGE---DGFIRLHHFEKS 347 (369)
T ss_dssp -------EEECTTSSEEEE-EET---TSEEEEEEECHH
T ss_pred -------EEECCCCCEEEE-EcC---CCeEEEEECccc
Confidence 357888876543 332 245777776543
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.19 E-value=5e-08 Score=97.62 Aligned_cols=223 Identities=14% Similarity=0.114 Sum_probs=132.5
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceE-ecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
.+..+.|||||+.|+... ...|.++++.+++.. .+...........+..+.|+||++.|+....
T Consensus 53 ~v~~~~~~~~~~~l~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 117 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---- 117 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----
T ss_pred ceEEEEEecCCcEEEEcC-----------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----
Confidence 588999999999988764 257788898876422 1111000000112568899999998777411
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe---eecC-CCCceeeeeECCC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~---~~l~-~~~~~~~~~~SpD 185 (616)
...|.++|+ +++. ..+. ....+..++|+|+
T Consensus 118 ---------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~ 152 (337)
T 1gxr_A 118 ---------------------------------------------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152 (337)
T ss_dssp ---------------------------------------------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT
T ss_pred ---------------------------------------------CCcEEEEECCCCCcceeeecccCCCceEEEEECCC
Confidence 134566666 3331 1222 2234668999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
++.|+....+ ..+.+||+.+++. ..+... ......+.|+|+++. |+..
T Consensus 153 ~~~l~~~~~d-------------g~v~~~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~-l~~~---- 201 (337)
T 1gxr_A 153 SKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQGH-------------TDGASCIDISNDGTK-LWTG---- 201 (337)
T ss_dssp SSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSE-EEEE----
T ss_pred CCEEEEEeCC-------------CcEEEEeCCCCceeeeeecc-------------cCceEEEEECCCCCE-EEEE----
Confidence 9998877643 3688999876543 333221 011235889999873 3322
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee-
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD- 343 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~- 343 (616)
.....+.+|+. ..++.............+.|+||+..++.... .+ .|+++++.++ +...+..
T Consensus 202 --------~~dg~i~~~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~--~i~~~~~~~~--~~~~~~~~ 264 (337)
T 1gxr_A 202 --------GLDNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGME--SS--NVEVLHVNKP--DKYQLHLH 264 (337)
T ss_dssp --------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEET--TS--CEEEEETTSS--CEEEECCC
T ss_pred --------ecCCcEEEEEC---CCCceEeeecCCCceEEEEECCCCCEEEEEcC--CC--cEEEEECCCC--CeEEEcCC
Confidence 12345677776 44444333344455678899999988766542 12 5777888763 3232321
Q ss_pred -cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 344 -RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 344 -~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
..+. .+.|+++|+.++...
T Consensus 265 ~~~v~---------~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 265 ESCVL---------SLKFAYCGKWFVSTG 284 (337)
T ss_dssp SSCEE---------EEEECTTSSEEEEEE
T ss_pred cccee---------EEEECCCCCEEEEec
Confidence 1122 288999999876554
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.17 E-value=5.5e-08 Score=101.50 Aligned_cols=294 Identities=6% Similarity=-0.044 Sum_probs=162.7
Q ss_pred EccCCCeEEEEEeecccc------ccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 38 WSPDGKRIAFSVRVDEED------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 38 ~SPDG~~iaf~~~~~~~~------~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
|+|+++.++++....... +..++...||+++.+++..+.+...... .....+.|+| +..++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~-~~~~~~~~~----- 141 (433)
T 3bws_A 71 YKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFID-NTRLAIPLL----- 141 (433)
T ss_dssp CCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESS-SSEEEEEBT-----
T ss_pred ccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeC-CCeEEEEeC-----
Confidence 999998877665432100 0112234888888876644333222111 1134789999 555555411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCC-------CCceeeeeEC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT-------PAVYTAVEPS 183 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~-------~~~~~~~~~S 183 (616)
....|+++|+ +++...... ...+..++|+
T Consensus 142 -------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~ 178 (433)
T 3bws_A 142 -------------------------------------------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP 178 (433)
T ss_dssp -------------------------------------------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG
T ss_pred -------------------------------------------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc
Confidence 0134777788 565544221 2245678999
Q ss_pred CCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEe
Q 007140 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (616)
Q Consensus 184 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (616)
|+|+.++.... ...+.+||+.+++ ...+... ......+.|+||++. ++...
T Consensus 179 ~~~~~~~s~~~-------------d~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-l~~~~- 230 (433)
T 3bws_A 179 EHNELWVSQMQ-------------ANAVHVFDLKTLAYKATVDLT-------------GKWSKILLYDPIRDL-VYCSN- 230 (433)
T ss_dssp GGTEEEEEEGG-------------GTEEEEEETTTCCEEEEEECS-------------SSSEEEEEEETTTTE-EEEEE-
T ss_pred CCCEEEEEECC-------------CCEEEEEECCCceEEEEEcCC-------------CCCeeEEEEcCCCCE-EEEEe-
Confidence 99876554432 2368999987653 3333310 011235889999973 43331
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccC----ccEEEEEEeCCCCCCCc
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTWLVCPGSKDVAP 338 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~----~~~~l~~~d~~~~~~~~ 338 (616)
.....+++++. ..++.............+.|+|||..++....... ....|+++|+.++ +.
T Consensus 231 ----------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~ 295 (433)
T 3bws_A 231 ----------WISEDISVIDR---KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--KL 295 (433)
T ss_dssp ----------TTTTEEEEEET---TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--EE
T ss_pred ----------cCCCcEEEEEC---CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--cE
Confidence 12245777776 44444333333344677899999987655432211 1247889999873 22
Q ss_pred eEEe--ecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCc
Q 007140 339 RVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 416 (616)
Q Consensus 339 ~~l~--~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 416 (616)
.... ...... ++|+|+|+.+++..... ..+. .+|+.+++........
T Consensus 296 ~~~~~~~~~~~~---------~~~~~~g~~l~~~~~~~----~~v~----------------v~d~~~~~~~~~~~~~-- 344 (433)
T 3bws_A 296 IDTIGPPGNKRH---------IVSGNTENKIYVSDMCC----SKIE----------------VYDLKEKKVQKSIPVF-- 344 (433)
T ss_dssp EEEEEEEECEEE---------EEECSSTTEEEEEETTT----TEEE----------------EEETTTTEEEEEEECS--
T ss_pred EeeccCCCCcce---------EEECCCCCEEEEEecCC----CEEE----------------EEECCCCcEEEEecCC--
Confidence 2222 112222 88999999888775322 1232 3577666654443221
Q ss_pred ccceeeEEeecCCCcccccccCCEEEEEeecCCCC-----------ceEEEEeCCCCceeee
Q 007140 417 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEI-----------TQYHILSWPLKKSSQI 467 (616)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p-----------~~l~~~~~~~~~~~~L 467 (616)
..+.. ..++++++.++........+ +.|+++++.+++....
T Consensus 345 ---~~~~~-------~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 345 ---DKPNT-------IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp ---SSEEE-------EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ---CCCCe-------EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 11222 35788888776655443322 4899999887765443
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.15 E-value=1.3e-08 Score=103.82 Aligned_cols=232 Identities=14% Similarity=0.193 Sum_probs=120.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..++|||||++||-.+.... ..-...|++++..+++...........-...+..+.|+||++.|+-. .+
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~----~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d---- 114 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSS----RTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS---- 114 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSS----SSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT----
T ss_pred CEEEEEECCCCCEEEEEcCCCC----ccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC----
Confidence 4678999999999887653100 00135789998877654321110000001125688999999755432 10
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee------ecCCCCceeeeeECC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK------DFGTPAVYTAVEPSP 184 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~------~l~~~~~~~~~~~Sp 184 (616)
..|.++|+ +++.. .......+..++|||
T Consensus 115 ---------------------------------------------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 115 ---------------------------------------------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp ---------------------------------------------SCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred ---------------------------------------------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 12333344 22211 112233567899999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEee
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (616)
||++|+....+ ..|.+||+.+++. ..+... ......+.|+|++...++-. .
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~~h-------------~~~v~~v~~s~~~~~~~~s~-~- 201 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYNAH-------------SSEVNCVAACPGKDTIFLSC-G- 201 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTCSSCEEEE-E-
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCC-------------CCCEEEEEEccCCCceeeee-c-
Confidence 99998877543 3688999886643 333221 01123578888886533322 1
Q ss_pred cCCCcccccCCCceeEeccCCCCCCCCceE-ec--cccccccceeecCCCc-eEEEeeeccCccEEEEEEeCCCCCCCce
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH--KLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~--~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (616)
....+.+|+. ..++... +. ........+.|+|++. .|+... . ++ .|.++|+.+++ ..+
T Consensus 202 ----------~dg~v~~wd~---~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~-~-d~--~i~~wd~~~~~-~~~ 263 (357)
T 4g56_B 202 ----------EDGRILLWDT---RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD-E-TG--NVSLVNIKNPD-SAQ 263 (357)
T ss_dssp ----------TTSCEEECCT---TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE-S-SS--CEEEEESSCGG-GCE
T ss_pred ----------cCCceEEEEC---CCCceeeeeeeccccccccchhhhhcccceEEEee-c-cc--ceeEEECCCCc-EeE
Confidence 1235666676 4333332 21 2233456789999865 454433 2 23 46777887632 222
Q ss_pred EEe--ecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 340 VLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 340 ~l~--~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.+. ...+. .++|+|+|+.+++...
T Consensus 264 ~~~~~~~~v~---------~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 264 TSAVHSQNIT---------GLAYSYHSSPFLASIS 289 (357)
T ss_dssp EECCCSSCEE---------EEEECSSSSCCEEEEE
T ss_pred EEeccceeEE---------EEEEcCCCCCEEEEEe
Confidence 221 11122 2789999876555443
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.12 E-value=5.4e-08 Score=105.72 Aligned_cols=219 Identities=14% Similarity=0.182 Sum_probs=133.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|||+.|+.... + ..|.+++..+.+...+..... .+..+.|+|||+.|+....
T Consensus 305 ~v~~~~~~~~~~~l~t~~~--------d--~~i~~w~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~~~~----- 364 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASD--------D--KTVKLWNRNGQHLQTLTGHSS-----SVWGVAFSPDGQTIASASD----- 364 (577)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEET-----
T ss_pred CeEEEEECCCCCEEEEEeC--------C--CeEEEEeCCCCeeEEEeCCCC-----CEEEEEECCCCCEEEEEeC-----
Confidence 4678899999999887653 2 456667887766666643332 1567899999998877421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecC-CCCceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG-TPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~-~~~~~~~~~~SpDg~~i 189 (616)
...+.+++.+++ ...+. ....+..++|||||++|
T Consensus 365 --------------------------------------------dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 365 --------------------------------------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp --------------------------------------------TSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred --------------------------------------------CCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 123444455543 22332 23356789999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
+....+ ..|.+||.+++..+.+.... .....+.|+||++. |+..
T Consensus 401 ~~~~~d-------------~~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~d~~~-l~~~--------- 444 (577)
T 2ymu_A 401 ASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVWGVAFSPDDQT-IASA--------- 444 (577)
T ss_dssp EEEETT-------------SEEEEECTTCCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE---------
T ss_pred EEEeCC-------------CEEEEEeCCCCEEEEecCCC-------------CCeEEEEECCCCCE-EEEE---------
Confidence 877543 25888998877666554321 11235789999973 3322
Q ss_pred cccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee--cccc
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFE 347 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~ 347 (616)
.....+.+|+. .+.....+......+..+.|+||++.|+.... ++ .|.+.+..+ ...+.+.. ..+.
T Consensus 445 ---~~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~~--d~--~i~iw~~~~--~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 445 ---SDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD--DK--TVKLWNRNG--QLLQTLTGHSSSVR 512 (577)
T ss_dssp ---ETTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEET--TS--EEEEEETTS--CEEEEEECCSSCEE
T ss_pred ---cCCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CC--EEEEEcCCC--CEEEEEeCCCCCEE
Confidence 11235666676 44333445555556778899999998776542 23 455566654 12222221 1122
Q ss_pred cccCCCCCCCeeeCCCCCEEEEEe
Q 007140 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 348 ~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.++|+|||++|+...
T Consensus 513 ---------~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 513 ---------GVAFSPDGQTIASAS 527 (577)
T ss_dssp ---------EEEECTTSSCEEEEE
T ss_pred ---------EEEEcCCCCEEEEEE
Confidence 288999999876544
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=1.1e-07 Score=96.59 Aligned_cols=311 Identities=12% Similarity=0.015 Sum_probs=149.2
Q ss_pred CeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCC
Q 007140 43 KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGP 122 (616)
Q Consensus 43 ~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~ 122 (616)
.+.+|+...... .++.-.+|.++.++|+.++++.... .....+.|||||++|++......
T Consensus 13 ~~~~~vg~y~~~---~~~~i~~~~~d~~~g~~~~~~~~~~----~~p~~l~~spdg~~l~~~~~~~~------------- 72 (361)
T 3scy_A 13 ELTMLVGTYTSG---NSKGIYTFRFNEETGESLPLSDAEV----ANPSYLIPSADGKFVYSVNEFSK------------- 72 (361)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEEETTTCCEEEEEEEEC----SCCCSEEECTTSSEEEEEECCSS-------------
T ss_pred ceEEEEEeccCC---CCCCEEEEEEeCCCCCEEEeecccC----CCCceEEECCCCCEEEEEEccCC-------------
Confidence 445666544210 1345567777878888777654311 11457899999998877522100
Q ss_pred eeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC-CCeeecCC----CCceeeeeECCCCcEEEEEeccCC
Q 007140 123 KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGT----PAVYTAVEPSPDQKYVLITSMHRP 197 (616)
Q Consensus 123 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~-g~~~~l~~----~~~~~~~~~SpDg~~i~~~~~~~~ 197 (616)
+ + ..-.+|.++.. |+.+.+.. ......+++ ||++|++.....
T Consensus 73 -------~----------------~-------~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~- 119 (361)
T 3scy_A 73 -------D----------------Q-------AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG- 119 (361)
T ss_dssp -------T----------------T-------CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT-
T ss_pred -------C----------------C-------CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC-
Confidence 0 0 12245555653 65554431 222335566 899888775322
Q ss_pred CcccccCcccCccEEEEeCC-CceEEEecC---CCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccC
Q 007140 198 YSYKVPCARFSQKVQVWTTD-GKLVRELCD---LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (616)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~ 273 (616)
..+.++++. .+....+.. .......+. .........+.|+|||+. |+... .
T Consensus 120 -----------~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~spdg~~-l~~~~---~-------- 174 (361)
T 3scy_A 120 -----------GSITVFPIGQDGALLPASDVIEFKGSGPDKE--RQTMPHLHCVRITPDGKY-LLADD---L-------- 174 (361)
T ss_dssp -----------TEEEEEEBCTTSCBCSCSEEEECCCCCSCTT--TCSSCCEEEEEECTTSSE-EEEEE---T--------
T ss_pred -----------CEEEEEEeCCCCcCcccceeEEccCCCCCcc--ccCCCcceEEEECCCCCE-EEEEe---C--------
Confidence 357788875 332222111 000000000 000001124789999984 44331 1
Q ss_pred CCceeEeccCCCCCCC----C-ce------E-eccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEE
Q 007140 274 PRDIIYTQPAEPAEGE----K-PE------I-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (616)
Q Consensus 274 ~~~~~~~~~~~~~~~g----~-~~------~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (616)
..+.+.+++.+. .++ + .. . ..........+.|+|||+.++..... .+ .|.++++++ +..+.+
T Consensus 175 ~~~~v~v~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~--~v~v~~~~~--g~~~~~ 248 (361)
T 3scy_A 175 GTDQIHKFNINP-NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-GG--TVIAFRYAD--GMLDEI 248 (361)
T ss_dssp TTTEEEEEEECT-TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TC--EEEEEEEET--TEEEEE
T ss_pred CCCEEEEEEEcC-CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-CC--eEEEEEecC--CceEEe
Confidence 123344444300 222 1 11 1 11222334568999999865544311 23 566666655 333333
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEEeee-cCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccce
Q 007140 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK-ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (616)
Q Consensus 342 ~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~-~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (616)
....... -...+...++|+|||++|++.... . ....+| .++..+++.+.+...... .
T Consensus 249 ~~~~~~~-~~~~~~~~i~~spdg~~l~v~~~~~~--~~i~v~----------------~~~~~~g~~~~~~~~~~g---~ 306 (361)
T 3scy_A 249 QTVAADT-VNAQGSGDIHLSPDGKYLYASNRLKA--DGVAIF----------------KVDETNGTLTKVGYQLTG---I 306 (361)
T ss_dssp EEEESCS-SCCCCEEEEEECTTSSEEEEEECSSS--CEEEEE----------------EECTTTCCEEEEEEEECS---S
T ss_pred EEEecCC-CCCCCcccEEECCCCCEEEEECCCCC--CEEEEE----------------EEcCCCCcEEEeeEecCC---C
Confidence 2111000 000000138899999998876542 1 122333 345456665544221100 0
Q ss_pred eeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCceeee
Q 007140 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (616)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~~L 467 (616)
.+. ...|+||++++++... ...--.+|.+++++|+.+.+
T Consensus 307 ~~~-------~~~~spdg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 307 HPR-------NFIITPNGKYLLVACR-DTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp CCC-------EEEECTTSCEEEEEET-TTTEEEEEEECTTTCCEEEC
T ss_pred CCc-------eEEECCCCCEEEEEEC-CCCCEEEEEEECCCCcEeec
Confidence 111 1357899987765543 23334466678777776554
No 58
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.10 E-value=2.4e-07 Score=100.54 Aligned_cols=219 Identities=14% Similarity=0.182 Sum_probs=131.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|+|||+.|+.... ...|.+++..+...+.+..+.. .+..+.|+||++.|+....+
T Consensus 264 ~v~~v~~~~d~~~l~~~~~----------d~~i~~w~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~~~d---- 324 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASASD----------DKTVKLWNRNGQLLQTLTGHSS-----SVWGVAFSPDGQTIASASDD---- 324 (577)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSCEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEEEEeC----------CCEEEEEeCCCcEEEEEecCCC-----CeEEEEECCCCCEEEEEeCC----
Confidence 4678899999998876543 2457777876544455543322 15678999999987764211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCC-CCceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-PAVYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~-~~~~~~~~~SpDg~~i 189 (616)
..+.++++++ ....+.. ...+..++|||||+.|
T Consensus 325 ---------------------------------------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 325 ---------------------------------------------KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp ---------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ---------------------------------------------CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 1234445544 3333332 2345678999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
+..... ..+.+++.+++....+.... .....+.|+|||+. |+..
T Consensus 360 ~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~-l~~~--------- 403 (577)
T 2ymu_A 360 ASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQT-IASA--------- 403 (577)
T ss_dssp EEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSC-EEEE---------
T ss_pred EEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCE-EEEE---------
Confidence 877543 25778888877666554311 11245789999984 3322
Q ss_pred cccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEee--cccc
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFE 347 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~ 347 (616)
.....+.+|+. .+...+.+.........+.|+||++.|+.... ++ .|.++++.+ ...+.+.. ..+.
T Consensus 404 ---~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d~--~v~~w~~~~--~~~~~~~~~~~~v~ 471 (577)
T 2ymu_A 404 ---SDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD--DK--TVKLWNRNG--QLLQTLTGHSSSVR 471 (577)
T ss_dssp ---ETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEET--TS--EEEEEETTS--CEEEEEECCSSCEE
T ss_pred ---eCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC--CC--EEEEEECCC--CEEEEEcCCCCCEE
Confidence 11235666675 43233344444556677899999998766542 23 465667654 11222221 1122
Q ss_pred cccCCCCCCCeeeCCCCCEEEEEe
Q 007140 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 348 ~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
. ++|+|||+.|+...
T Consensus 472 ~---------~~~spd~~~las~~ 486 (577)
T 2ymu_A 472 G---------VAFSPDGQTIASAS 486 (577)
T ss_dssp E---------EEECTTSCEEEEEE
T ss_pred E---------EEEcCCCCEEEEEe
Confidence 2 78999999877554
No 59
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.07 E-value=1.5e-07 Score=94.18 Aligned_cols=223 Identities=13% Similarity=0.112 Sum_probs=131.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|++..++-.+. ...|.++|+.+++........... +..+.|+||++.|+....
T Consensus 82 ~v~~~~~~~~~~~l~s~s~----------D~~i~lWd~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~g~~----- 142 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSL----------DAHIRLWDLENGKQIKSIDAGPVD----AWTLAFSPDSQYLATGTH----- 142 (321)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCTTC----CCCEEECTTSSEEEEECT-----
T ss_pred CEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCCEEEEEeCCCcc----EEEEEECCCCCEEEEEcC-----
Confidence 4678899999997665432 357888899988754332222211 457899999998877411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...+.++++ +++ ...+. ....+..++|||||++
T Consensus 143 --------------------------------------------dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 143 --------------------------------------------VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp --------------------------------------------TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred --------------------------------------------CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 124555666 343 22232 2235678999999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
|+....+ ..|.+||+.+++ ...+... ......+.|+||++. |+-.
T Consensus 179 lasg~~d-------------g~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spd~~~-l~s~------- 224 (321)
T 3ow8_A 179 LASGAID-------------GIINIFDIATGKLLHTLEGH-------------AMPIRSLTFSPDSQL-LVTA------- 224 (321)
T ss_dssp EEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCCCEEEECTTSCE-EEEE-------
T ss_pred EEEEcCC-------------CeEEEEECCCCcEEEEEccc-------------CCceeEEEEcCCCCE-EEEE-------
Confidence 9887643 268899987654 3333321 111346899999973 3221
Q ss_pred cccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeeccc
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 346 (616)
.....+.+|+. ..++.. .+......+..+.|+||+..|+.... ++ .|.+.|+.++ +....+....
T Consensus 225 -----s~dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~--D~--~v~iwd~~~~--~~~~~~~~h~ 290 (321)
T 3ow8_A 225 -----SDDGYIKIYDV---QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS--DK--SVKVWDVGTR--TCVHTFFDHQ 290 (321)
T ss_dssp -----CTTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TS--CEEEEETTTT--EEEEEECCCS
T ss_pred -----cCCCeEEEEEC---CCcceeEEEcCCCCceEEEEECCCCCEEEEEeC--CC--cEEEEeCCCC--EEEEEEcCCC
Confidence 12235666676 433332 34444455678999999998776542 23 3556677662 2111111111
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 347 ENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 347 ~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.. . ..+.|+++|+.|+...
T Consensus 291 ~~-v-----~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 291 DQ-V-----WGVKYNGNGSKIVSVG 309 (321)
T ss_dssp SC-E-----EEEEECTTSSEEEEEE
T ss_pred Cc-E-----EEEEECCCCCEEEEEe
Confidence 10 1 1288999999876443
No 60
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.06 E-value=1.3e-07 Score=103.84 Aligned_cols=230 Identities=11% Similarity=0.053 Sum_probs=126.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
......|||||++||+... ..|.++++.+++. +.++.+.. . +..+.|||||++|+....
T Consensus 20 ~~~~~~~spdg~~l~~~~~-----------~~v~l~~~~~~~~~~~~~~h~~-~----v~~~~~spdg~~lasg~~---- 79 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNG-----------TSVYTVPVGSLTDTEIYTEHSH-Q----TTVAKTSPSGYYCASGDV---- 79 (611)
T ss_dssp CCCCCEECTTSSEEEEEET-----------TEEEEEETTCSSCCEEECCCSS-C----EEEEEECTTSSEEEEEET----
T ss_pred ceeEEeeCCCCCEEEeCCC-----------CEEEEecCCCcccCeEecCCCC-c----eEEEEECCCCcEEEEEeC----
Confidence 4667899999999998651 3788889987654 34433332 2 668999999998877421
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC--ee-ecC-CCCceeeeeECCC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AK-DFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~--~~-~l~-~~~~~~~~~~SpD 185 (616)
...+.++|+ +++ .. .+. ....+..++||||
T Consensus 80 ---------------------------------------------d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 80 ---------------------------------------------HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 114 (611)
T ss_dssp ---------------------------------------------TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT
T ss_pred ---------------------------------------------CCCEEEeECCCCcceeeEeecccCCceEEEEECCC
Confidence 123445555 332 11 121 2235678999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecC
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (616)
|+.|+........ ...+++||.. .....+.. .......+.|+|+++..|+-. .
T Consensus 115 g~~l~~~~~~~~~---------~~~v~~wd~~-~~~~~l~g-------------h~~~v~~v~f~p~~~~~l~s~--s-- 167 (611)
T 1nr0_A 115 SKRIAAVGEGRER---------FGHVFLFDTG-TSNGNLTG-------------QARAMNSVDFKPSRPFRIISG--S-- 167 (611)
T ss_dssp SCEEEEEECCSSC---------SEEEEETTTC-CBCBCCCC-------------CSSCEEEEEECSSSSCEEEEE--E--
T ss_pred CCEEEEEECCCCc---------eeEEEEeeCC-CCcceecC-------------CCCCceEEEECCCCCeEEEEE--e--
Confidence 9999877643210 1256677642 22222211 011134588999987433322 1
Q ss_pred CCcccccCCCceeEeccCCCCCCCCc-eEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeec
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 344 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 344 (616)
....+.+|+. ..++. ..+......+..+.|+|||..|+.... ++ .|.+.|+.++ +....+..
T Consensus 168 --------~D~~v~lwd~---~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~--D~--~i~lwd~~~g--~~~~~~~~ 230 (611)
T 1nr0_A 168 --------DDNTVAIFEG---PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG--DG--TIVLYNGVDG--TKTGVFED 230 (611)
T ss_dssp --------TTSCEEEEET---TTBEEEEEECCCSSCEEEEEECTTSSEEEEEET--TS--CEEEEETTTC--CEEEECBC
T ss_pred --------CCCeEEEEEC---CCCeEeeeeccccCceEEEEECCCCCEEEEEEC--CC--cEEEEECCCC--cEeeeecc
Confidence 1234555665 32222 223334455678999999998776542 23 3555666553 22222211
Q ss_pred -ccccccCCCC-CCCeeeCCCCCEEEEEe
Q 007140 345 -VFENVYSDPG-SPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 345 -~~~~~~~~~g-~~~~~~s~dgk~l~~~~ 371 (616)
.... ....+ ...++|+|||+.|+...
T Consensus 231 ~~~~~-~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 231 DSLKN-VAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp TTSSS-CSSSSCEEEEEECTTSSEEEEEE
T ss_pred ccccc-cccCCCEEEEEECCCCCEEEEEe
Confidence 0000 00000 01388999999876554
No 61
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.06 E-value=1.4e-08 Score=113.29 Aligned_cols=245 Identities=11% Similarity=0.034 Sum_probs=146.5
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccc---cccCCCceeEEEEECCCCc--eEeccc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEE---DNVSSCKLRVWIADAETGE--AKPLFE 79 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~---~~~~~~~~~l~v~~~~~g~--~~~lt~ 79 (616)
..||++++.. |+..+.+ ++. .....++|| ||+.|+|++..+.+ ........+||++++.++. .++|+.
T Consensus 155 ~~i~v~dl~t----g~~~~~~-~~~-~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 227 (693)
T 3iuj_A 155 REIHLMDVES----KQPLETP-LKD-VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG 227 (693)
T ss_dssp EEEEEEETTT----CSEEEEE-EEE-EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred EEEEEEECCC----CCCCccc-cCC-ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEe
Confidence 4688999864 7776664 222 125789999 99999999864210 0001235789999998764 356654
Q ss_pred CCC-ccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccce
Q 007140 80 SPD-ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (616)
Q Consensus 80 ~~~-~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (616)
... .. .....+.|||||+.|++..... . ...+
T Consensus 228 ~~~~~~--~~~~~~~~SpDg~~l~~~~~~~---------------------~------------------------~~~~ 260 (693)
T 3iuj_A 228 AIPAQH--HRYVGATVTEDDRFLLISAANS---------------------T------------------------SGNR 260 (693)
T ss_dssp CSGGGC--CSEEEEEECTTSCEEEEEEESS---------------------S------------------------SCCE
T ss_pred cCCCCC--eEEEEEEEcCCCCEEEEEEccC---------------------C------------------------CCcE
Confidence 432 11 0134688999999988863210 0 1257
Q ss_pred EEEEeC-CC--CeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE---EEecCCCCCCC
Q 007140 159 LVLGSL-DG--TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAED 232 (616)
Q Consensus 159 l~~~d~-~g--~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~ 232 (616)
||++|+ ++ +.+.|+.........|+++|++|+|.++... ....|++++++++.. +.+....
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~---------~~~~l~~~d~~~~~~~~~~~l~~~~---- 327 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDA---------PNRRLVTVDAANPGPAHWRDLIPER---- 327 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTC---------TTCEEEEEETTSCCGGGCEEEECCC----
T ss_pred EEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCCccccEEEecCC----
Confidence 899998 44 5677765432222238999999999976532 134799999986543 4443210
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc-ccccccceeecCCCc
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSL 311 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~~~~~~~wspDg~ 311 (616)
. .. +.|+++++. |++....+ ....+++++. +++..+.+.- .......+.+++|+.
T Consensus 328 ---------~-~~-~~~s~~g~~-lv~~~~~~---------g~~~l~~~d~---~g~~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 328 ---------Q-QV-LTVHSGSGY-LFAEYMVD---------ATARVEQFDY---EGKRVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp ---------S-SC-EEEEEETTE-EEEEEEET---------TEEEEEEECT---TSCEEEEECCSSSSEEEECCCCTTCS
T ss_pred ---------C-CE-EEEEEECCE-EEEEEEEC---------CeeEEEEEEC---CCCeeEEeecCCCceEEeeecCCCCC
Confidence 0 11 278999875 55542211 2235677776 6555555542 223345677888887
Q ss_pred eEEEeeeccCccEEEEEEeCCCCCCCceEEe
Q 007140 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (616)
.+++..........||.+|+.++ +.+.|.
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g--~~~~l~ 412 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSG--AISLYR 412 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTC--CEEEEE
T ss_pred EEEEEecCCCCCCEEEEEECCCC--eEEEEE
Confidence 65543322223458999999873 445553
No 62
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.05 E-value=2e-08 Score=112.76 Aligned_cols=270 Identities=7% Similarity=0.007 Sum_probs=146.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEEC---CCC--ceEecccCCCccc--c-ccccceEEe-cCCcEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA---ETG--EAKPLFESPDICL--N-AVFGSFVWV-NNSTLLI 102 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~---~~g--~~~~lt~~~~~~~--~-~~~~~~~ws-pdg~~l~ 102 (616)
..+.|. |+|.+++|++.... .....+++.+. .++ +.+.+........ . ...+.+.|| |||++|+
T Consensus 118 ~~~~p~--~~g~~~yy~~~~~g-----~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lA 190 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREVKG-----KPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVA 190 (751)
T ss_dssp EECCCE--EETTEEEEEEECTT-----CCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEE
T ss_pred cCCCCe--EECCEEEEEEECCC-----CceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEE
Confidence 345554 79999999976421 12346788876 444 4344432211000 0 024578999 9999999
Q ss_pred EEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-CeeecCCC--Ccee
Q 007140 103 FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP--AVYT 178 (616)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~~~l~~~--~~~~ 178 (616)
|+... .|+ ...+||++|+ +| +. +... ....
T Consensus 191 y~~~~---------------------~G~-----------------------~~~~l~v~dl~~g~~~--l~~~~~~~~~ 224 (751)
T 2xe4_A 191 FSVDM---------------------SGN-----------------------EVYTIEFKRISDPSQT--IADKVSGTNG 224 (751)
T ss_dssp EEEES---------------------SSS-----------------------SCEEEEEEETTCTTCC--CCCCEEEECS
T ss_pred EEEeC---------------------CCC-----------------------ceEEEEEEECCCCCEe--CCccccCcee
Confidence 97321 010 1247999999 55 42 2211 1235
Q ss_pred eeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEE
Q 007140 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (616)
Q Consensus 179 ~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~ 258 (616)
.++|||||+.|+|+...... .+.+||++++.+++.. ..++
T Consensus 225 ~~~WspDg~~l~y~~~d~~~--------~~~~v~~~~lgt~~~~--------------------------------~~lv 264 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETL--------RENKVWRHVMGKLQSE--------------------------------DVCL 264 (751)
T ss_dssp CCEECSSTTEEEEEEECTTC--------CEEEEEEEETTSCGGG--------------------------------CEEE
T ss_pred eEEEecCCCEEEEEEECCCC--------CCCEEEEEECCCCchh--------------------------------cEEE
Confidence 78999999999999754210 1235555555432100 0011
Q ss_pred EEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCc
Q 007140 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (616)
Q Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (616)
+- . . .......+.|||||+.|++..+. ....+||++|++++.++.
T Consensus 265 ~~---------------------~----~---------~~~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~d~~~~~~~~ 309 (751)
T 2xe4_A 265 YE---------------------E----H---------NPLFSAFMYKAADTNTLCIGSQS-PETAEVHLLDLRKGNAHN 309 (751)
T ss_dssp EE---------------------C----C---------CTTCEEEEEECTTSSEEEEEEEC-SSCEEEEEEESSSCTTCC
T ss_pred Ee---------------------c----C---------CCceEEEEEECCCCCEEEEEecC-CCCceEEEEECCCCCCCc
Confidence 11 0 0 00112357899999987766543 245699999998753344
Q ss_pred --eEEeecccccccCCCCCCCeeeCCC---CCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCC-Cceee-ee
Q 007140 339 --RVLFDRVFENVYSDPGSPMMTRTST---GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-GSKER-IW 411 (616)
Q Consensus 339 --~~l~~~~~~~~~~~~g~~~~~~s~d---gk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~-g~~~~-l~ 411 (616)
+.|+.... . ..|+++ |+.+++.+...+.....|| ++++++ ++.+. |+
T Consensus 310 ~~~~l~~~~~-~---------~~~s~~~~~g~~l~~~t~~~~a~~~~L~----------------~~d~~~~~~~~~~li 363 (751)
T 2xe4_A 310 TLEIVRPREK-G---------VRYDVQMHGTSHLVILTNEGGAVNHKLL----------------IAPRGQPSDWSHVLV 363 (751)
T ss_dssp CEEESSCCCT-T---------CCEEEEEETTTEEEEEECTTTCTTCEEE----------------EEETTSTTCCCCEEE
T ss_pred eeEEeecCCC-C---------ceEEEeeeeCCEEEEEeCCCCCCCcEEE----------------EEcCCCcccceeeEE
Confidence 55543221 1 344444 8888877653211223444 566654 34444 44
Q ss_pred ecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeC-------CCCc-eeeee
Q 007140 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW-------PLKK-SSQIT 468 (616)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~-------~~~~-~~~Lt 468 (616)
..... ..+. .+++.++++++..... ...+|+++++ .+++ .++|+
T Consensus 364 ~~~~~---~~l~---------~~~~~~~~lv~~~~~~-g~~~l~~~dl~~~~~~~~~g~~~~~l~ 415 (751)
T 2xe4_A 364 DHSED---VFME---------SIAVRSNYLVVAGRRA-GLTRIWTMMADSQDGVFKAGTGLREVV 415 (751)
T ss_dssp CCCSS---EEEE---------EEEECSSEEEEEEEET-TEEEEEEEECCTTTSCCCTTTCCEECC
T ss_pred CCCCC---cEEE---------EEEEECCEEEEEEEeC-CEEEEEEEecccccccccCCccceEEC
Confidence 32211 0111 2344567777766543 4677999996 5556 56653
No 63
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.04 E-value=8.8e-09 Score=105.35 Aligned_cols=200 Identities=10% Similarity=0.041 Sum_probs=116.4
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
....+|||||++||..+. +....|.++|+++++......... .+..+.|||||++|+....
T Consensus 136 ~~~v~fSpDg~~la~as~--------~~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~~l~s~s~------ 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASS--------KVPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGKVVAYITG------ 196 (365)
T ss_dssp EEEEEECTTSSCEEEEES--------CSSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSSEEEEECS------
T ss_pred EEEEEEcCCCCEEEEEEC--------CCCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCceEEeccc------
Confidence 345799999999988664 234678888999987655443322 2678999999998877521
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC---CCCceeeeeECCCCc
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG---TPAVYTAVEPSPDQK 187 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~---~~~~~~~~~~SpDg~ 187 (616)
..+.+++. +++. ...+ ....+..++|||||+
T Consensus 197 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 197 --------------------------------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp --------------------------------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred --------------------------------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 11223333 3421 1111 122456899999999
Q ss_pred EEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
.++..+..... ...++.+++.......+...... ........+.|||||+. |+-. .
T Consensus 233 ~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~V~~~~~Spdg~~-lasg-s----- 288 (365)
T 4h5i_A 233 VLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQVT--------NRFKGITSMDVDMKGEL-AVLA-S----- 288 (365)
T ss_dssp EEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEEEE--------SSCSCEEEEEECTTSCE-EEEE-E-----
T ss_pred EEEEEecCCcc---------eeEEeecccccceecceeeeeec--------CCCCCeEeEEECCCCCc-eEEE-c-----
Confidence 99887654321 12466777654432221100000 00111235789999983 3222 1
Q ss_pred cccccCCCceeEeccCCCCCCCCceE-e-ccccccccceeecCCCceEEEeeeccCccEEEEEEe
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPEI-L-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~~-l-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (616)
....+.+|++ .+++... + ......+..++|||||+.|+..+. ++.-+||.+.
T Consensus 289 ------~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~--D~tvrvw~ip 342 (365)
T 4h5i_A 289 ------NDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA--ANTIHIIKLP 342 (365)
T ss_dssp ------TTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET--TSEEEEEECC
T ss_pred ------CCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC--CCeEEEEEcC
Confidence 2235677787 5444332 2 233456788999999998887653 2444666553
No 64
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.03 E-value=6.9e-07 Score=96.23 Aligned_cols=303 Identities=9% Similarity=0.027 Sum_probs=158.6
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEEC--CCCceEecccCCCccccccccceEEec----CCcEEEEEec
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDICLNAVFGSFVWVN----NSTLLIFTIP 106 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~--~~g~~~~lt~~~~~~~~~~~~~~~wsp----dg~~l~~~~~ 106 (616)
....+|||||++|+... . + ..|.++|+ ++++...-..... ....+.||| ||++|+....
T Consensus 181 ~~~v~~spdg~~l~v~~-~-------d--~~V~v~D~~~~t~~~~~~i~~g~-----~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 181 VHISRMSASGRYLLVIG-R-------D--ARIDMIDLWAKEPTKVAEIKIGI-----EARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEEEECTTSCEEEEEE-T-------T--SEEEEEETTSSSCEEEEEEECCS-----EEEEEEECCSTTCTTTEEEEEEE
T ss_pred cceEEECCCCCEEEEEC-C-------C--CeEEEEECcCCCCcEEEEEecCC-----CcceEEeCCCcCCCCCEEEEEEc
Confidence 56788999999866553 2 2 78999999 6766433222211 145789999 9998877410
Q ss_pred CCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeee-cCC-----------
Q 007140 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-FGT----------- 173 (616)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~-l~~----------- 173 (616)
...++.++|. ++++.+ +..
T Consensus 246 ------------------------------------------------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 246 ------------------------------------------------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp ------------------------------------------------ESSEEEEEETTTCCEEEEEECCEECSSSCCEE
T ss_pred ------------------------------------------------cCCeEEEEeccccccceeecccCcccCccccc
Confidence 0134555565 443222 211
Q ss_pred -CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 174 -PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 174 -~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
......+.+|||++.++++... ...|+++|....+...++.++. ......+.|+||
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~~~i~~-----------~~~~~~~~~spd 334 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTVTSIGA-----------APFLHDGGWDSS 334 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEEEEEEC-----------CSSCCCEEECTT
T ss_pred cCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCcceeEEecc-----------CcCccCceECCC
Confidence 1134578999999988777533 2479999987543211211111 011346889999
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc---cccccceee-cCCCce-EEEeeeccCccEEEE
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSW-CDDSLA-LVNETWYKTSQTRTW 327 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~---~~~~~~~~w-spDg~~-l~~~~~~~~~~~~l~ 327 (616)
|+. + ++.. ...+.+.++|. .+++....... +.....+.| +||+.. ++... ..++ .|-
T Consensus 335 g~~-l-~va~----------~~~~~v~v~D~---~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~-~~d~--~V~ 396 (543)
T 1nir_A 335 HRY-F-MTAA----------NNSNKVAVIDS---KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH-LGDG--SIS 396 (543)
T ss_dssp SCE-E-EEEE----------GGGTEEEEEET---TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB-SSSS--EEE
T ss_pred CCE-E-EEEe----------cCCCeEEEEEC---CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc-CCCc--eEE
Confidence 984 3 3321 12345666777 55554432221 111122344 677444 44332 1112 566
Q ss_pred EEeCCCCCC---CceEEeecccccccCCCCCCCeeeCCCCCEEEEEee-ecC-CcccEEEEEecCCCCCCCcceeEeeec
Q 007140 328 LVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK-KEN-DEQIYILLNGRGFTPEGNIPFLDLFDI 402 (616)
Q Consensus 328 ~~d~~~~~~---~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~-~~~-~~~~~l~~~~~g~~~~~~~~~l~~~d~ 402 (616)
++++++... .-+++-..... ..+...+.++|||+.|++... +.+ +....+ ..+|+
T Consensus 397 v~d~~~~~~~~~~~~~v~~l~~~----g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v----------------~v~d~ 456 (543)
T 1nir_A 397 LIGTDPKNHPQYAWKKVAELQGQ----GGGSLFIKTHPKSSHLYVDTTFNPDARISQSV----------------AVFDL 456 (543)
T ss_dssp EEECCTTTCTTTBTSEEEEEECS----CSCCCCEECCTTCCEEEECCTTCSSHHHHTCE----------------EEEET
T ss_pred EEEeCCCCCchhcCeEEEEEEcC----CCCceEEEcCCCCCcEEEecCCCCCcccCceE----------------EEEEC
Confidence 677765210 01222110000 011234788999999887642 110 001112 13577
Q ss_pred CCCcee-eeeecCC----cccceeeEEeecCCCcccccccCCEEEEEeecC-CCCceEEEEeCCCCceee
Q 007140 403 NTGSKE-RIWESNR----EKYFETAVALVFGQGEEDINLNQLKILTSKESK-TEITQYHILSWPLKKSSQ 466 (616)
Q Consensus 403 ~~g~~~-~l~~~~~----~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~-~~p~~l~~~~~~~~~~~~ 466 (616)
++++.. +++.... ......+.. ..|++||+.+++...+. .....|.++|.++++...
T Consensus 457 ~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 457 KNLDAKYQVLPIAEWADLGEGAKRVVQ-------PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA 519 (543)
T ss_dssp TCTTSCCEEECHHHHHCCCSSCCEEEE-------EEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred CCCCCCeEEeechhhcccCCCCCceEe-------ccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEE
Confidence 766643 3321000 000112222 36899999888776433 456889999988887643
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.02 E-value=3.7e-07 Score=94.34 Aligned_cols=248 Identities=11% Similarity=0.108 Sum_probs=144.8
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
.|++-++.. ++...+........+..+.|||||+.|+.... ...|.++++.+++...........
T Consensus 114 ~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~- 178 (401)
T 4aez_A 114 NVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGLG----------NGLVDIYDVESQTKLRTMAGHQAR- 178 (401)
T ss_dssp EEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCEEEEECCCSSC-
T ss_pred eEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEECC----------CCeEEEEECcCCeEEEEecCCCCc-
Confidence 467777754 66666554433335889999999999887653 257788899887754433222212
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC
Q 007140 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~ 165 (616)
+..+.| +++.|+... ....|.++|+.
T Consensus 179 ---v~~~~~--~~~~l~~~~-------------------------------------------------~dg~i~i~d~~ 204 (401)
T 4aez_A 179 ---VGCLSW--NRHVLSSGS-------------------------------------------------RSGAIHHHDVR 204 (401)
T ss_dssp ---EEEEEE--ETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---eEEEEE--CCCEEEEEc-------------------------------------------------CCCCEEEEecc
Confidence 557778 455554431 01355666663
Q ss_pred -C-C-eeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCc
Q 007140 166 -G-T-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSV 240 (616)
Q Consensus 166 -g-~-~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~ 240 (616)
+ . ...+. ....+..++|+||++.|+....+ ..+.+||+..++ ...+...
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~------------- 258 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKTNH------------- 258 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEECCC-------------
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEecCC-------------
Confidence 2 2 22332 33456789999999998887643 268899987553 3333321
Q ss_pred cCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeecc
Q 007140 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (616)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (616)
......+.|+|++.. ++.... + .....+.+|+. ..++.............+.|+||+..++......
T Consensus 259 ~~~v~~~~~~p~~~~-ll~~~~---g------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 259 NAAVKAVAWCPWQSN-LLATGG---G------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp SSCCCEEEECTTSTT-EEEEEC---C------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred cceEEEEEECCCCCC-EEEEec---C------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 111346899999875 333210 0 12346777787 5455444334455678899999999876643222
Q ss_pred CccEEEEEEeCCCCCCCceEEe--ecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 321 TSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~--~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
++ .|.++++.++ ....+. .... . ....+.|+|+|+.|+...
T Consensus 326 dg--~i~v~~~~~~--~~~~~~~~~~h~-~-----~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 326 DN--NLSIWSYSSS--GLTKQVDIPAHD-T-----RVLYSALSPDGRILSTAA 368 (401)
T ss_dssp TC--EEEEEEEETT--EEEEEEEEECCS-S-----CCCEEEECTTSSEEEEEC
T ss_pred CC--cEEEEecCCc--cceeEEEecCCC-C-----CEEEEEECCCCCEEEEEe
Confidence 34 4555555542 222221 1111 0 112289999999877654
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.02 E-value=6.6e-08 Score=97.06 Aligned_cols=231 Identities=14% Similarity=0.092 Sum_probs=125.5
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc---eEecccCCC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPD 82 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~---~~~lt~~~~ 82 (616)
.|.+.++.. .+|+.+.+..++.......++|||||++|++... ....|.++++..|+ .........
T Consensus 61 ~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 61 RVLAYRIAP--DDGALTFAAESALPGSLTHISTDHQGQFVFVGSY---------NAGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp EEEEEEECT--TTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET---------TTTEEEEEEEETTEEEEEEEEECCCT
T ss_pred eEEEEEecC--CCCceeeccccccCCCCcEEEEcCCCCEEEEEec---------CCCeEEEEECCCCccccccccccCCC
Confidence 344545531 2466665554443335778899999999877653 23567777774332 222221111
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEE
Q 007140 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (616)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (616)
....+.|+|||+.|++... ....|+++
T Consensus 130 -----~~~~~~~s~dg~~l~~~~~------------------------------------------------~~~~v~~~ 156 (343)
T 1ri6_A 130 -----GCHSANISPDNRTLWVPAL------------------------------------------------KQDRICLF 156 (343)
T ss_dssp -----TBCCCEECTTSSEEEEEEG------------------------------------------------GGTEEEEE
T ss_pred -----CceEEEECCCCCEEEEecC------------------------------------------------CCCEEEEE
Confidence 1557899999998866410 01345666
Q ss_pred eC-C-CCeee-----cC--CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC--CceEE---EecCCC
Q 007140 163 SL-D-GTAKD-----FG--TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVR---ELCDLP 228 (616)
Q Consensus 163 d~-~-g~~~~-----l~--~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~---~l~~~~ 228 (616)
++ + ++... +. .......++|+|||++|++..... ..+.+++++ +++.. .+...+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~------------~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN------------SSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT------------TEEEEEESSCTTSCCEEEEEEECSC
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC------------CEEEEEEecCCCCcEEEEeeccccC
Confidence 66 3 44331 11 222345789999999998875332 368888874 34332 222211
Q ss_pred CCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEec--cccccccceee
Q 007140 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSW 306 (616)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~--~~~~~~~~~~w 306 (616)
.... . ......+.|+|||+. |+.. . ...+.+.+++. ...++..+.+. ........+.|
T Consensus 225 ~~~~------~-~~~~~~i~~s~dg~~-l~v~-~----------~~~~~i~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
T 1ri6_A 225 ENFS------D-TRWAADIHITPDGRH-LYAC-D----------RTASLITVFSV-SEDGSVLSKEGFQPTETQPRGFNV 284 (343)
T ss_dssp TTCC------S-CCCEEEEEECTTSSE-EEEE-E----------TTTTEEEEEEE-CTTSCCEEEEEEEECSSSCCCEEE
T ss_pred cccc------c-cCCccceEECCCCCE-EEEE-e----------cCCCEEEEEEE-cCCCCceEEeeeecCCCccceEEE
Confidence 1000 0 001124889999973 4333 1 12245566665 10133333332 22233667899
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
+|||..|+.... ..+...+|.+|.++
T Consensus 285 s~dg~~l~~~~~-~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 285 DHSGKYLIAAGQ-KSHHISVYEIVGEQ 310 (343)
T ss_dssp CTTSSEEEEECT-TTCEEEEEEEETTT
T ss_pred CCCCCEEEEecC-CCCeEEEEEEcCCC
Confidence 999987665432 23555777788776
No 67
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.01 E-value=4e-07 Score=95.76 Aligned_cols=116 Identities=9% Similarity=-0.071 Sum_probs=67.3
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEE--ecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
..+..++|||||+.|++.... ..++++++..++... +..+ .+.......+.|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~-------------g~v~~~~~~~~~~~~~~~~~~----------~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKF-------------GDVYSIDINSIPEEKFTQEPI----------LGHVSMLTDVHLIKD 206 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTSCCCSSCCCCCS----------EECSSCEEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEEeCC-------------CcEEEEecCCcccccccceee----------ecccCceEEEEEcCC
Confidence 456789999999999888542 368888876543211 1010 000111235889999
Q ss_pred ---CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-E-eccccccccceeecCCCceEEEeeeccCccEEEE
Q 007140 253 ---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-I-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (616)
Q Consensus 253 ---g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~ 327 (616)
++. |+.. . ....+.+|+. ..++.. . +......+..+.|+ |+..|+.... ++ .|.
T Consensus 207 ~~~~~~-l~s~-~-----------~d~~i~vwd~---~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~--d~--~v~ 265 (450)
T 2vdu_B 207 SDGHQF-IITS-D-----------RDEHIKISHY---PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG--DD--KIF 265 (450)
T ss_dssp TTSCEE-EEEE-E-----------TTSCEEEEEE---SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEES--SS--EEE
T ss_pred CCCCcE-EEEE-c-----------CCCcEEEEEC---CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeC--CC--eEE
Confidence 652 3222 1 1235666676 434433 2 22344566788999 9887766542 23 677
Q ss_pred EEeCCCC
Q 007140 328 LVCPGSK 334 (616)
Q Consensus 328 ~~d~~~~ 334 (616)
++|+.++
T Consensus 266 vwd~~~~ 272 (450)
T 2vdu_B 266 AWDWKTG 272 (450)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 7888773
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.00 E-value=1.1e-06 Score=89.95 Aligned_cols=232 Identities=9% Similarity=0.056 Sum_probs=131.7
Q ss_pred cccceEEccCC-CeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEec-CCcEEEEEecCCC
Q 007140 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG-~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~ 109 (616)
.+..+.|+||| +.|+... . ...|.++++.+++...+..... -...+..+.|+| +++.|+....
T Consensus 75 ~v~~~~~~~~~~~~l~s~~-~---------dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~--- 139 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGS-K---------GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSSI--- 139 (383)
T ss_dssp CEEEEEECSSCTTEEEEEE-B---------TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEET---
T ss_pred CEEEEEECCCCCCEEEEEc-C---------CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEeC---
Confidence 58899999999 6555543 2 2567788998877655433210 011266899999 5565555311
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCC----CCceeeeeECC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT----PAVYTAVEPSP 184 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~----~~~~~~~~~Sp 184 (616)
...|.++|+.+ ....+.. ...+..++|+|
T Consensus 140 ----------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 140 ----------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ----------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ----------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 13455666644 3333321 12467899999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
|++.|+....+ ..|.+||+.++....+.... .....+.|+|+++..|+-. .
T Consensus 174 ~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s~-~-- 224 (383)
T 3ei3_B 174 SRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMATS-S-- 224 (383)
T ss_dssp TTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEEE-E--
T ss_pred CCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEEE-e--
Confidence 99988877543 36899999877666654311 1134688999997433322 1
Q ss_pred CCCcccccCCCceeEeccCCCCCC----CCceEeccccccccceeecC-CCceEEEeeeccCccEEEEEEeCCCCCCCce
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEG----EKPEILHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (616)
....+.+|+. .. +..............+.|+| |+..|+.... ++ .|.++|+.+.+ ...
T Consensus 225 ---------~d~~i~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~--d~--~i~iwd~~~~~-~~~ 287 (383)
T 3ei3_B 225 ---------VDATVKLWDL---RNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ--RN--EIRVYSSYDWS-KPD 287 (383)
T ss_dssp ---------TTSEEEEEEG---GGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES--SS--EEEEEETTBTT-SCS
T ss_pred ---------CCCEEEEEeC---CCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC--CC--cEEEEECCCCc-ccc
Confidence 1234556665 22 22222223445677899999 9988766542 13 67778887642 223
Q ss_pred EEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 340 ~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.+..... ..+.........|+|++..+.+..
T Consensus 288 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 288 QIIIHPH-RQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp EEEECCB-CCCTTSCCCCCEECSSSSEEEEEC
T ss_pred ccccccc-cccccccceEEeccCCCCceEEEe
Confidence 3321111 001111111257777777665543
No 69
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.00 E-value=7.6e-08 Score=98.30 Aligned_cols=83 Identities=11% Similarity=-0.017 Sum_probs=50.4
Q ss_pred eeEEeecCCCCCCCCceeeecC--CCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECC-CCceEecccCCC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGY--PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE-TGEAKPLFESPD 82 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~--~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~-~g~~~~lt~~~~ 82 (616)
.||+.++.. .+|+.+.+... ........+.|||||++|+ +.+. . .|.+++++ +|+..++.....
T Consensus 15 ~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~-~~~~--------~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 15 AIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIY-GAAM--------K--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEE-EEEB--------T--EEEEEEEEETTEEEEEEEEEC
T ss_pred cEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEE-EEcc--------c--eEEEEEECCCCCEEEeeEeec
Confidence 578877733 56777666532 1222467889999999875 4432 2 67777776 677655432211
Q ss_pred ccccccccceEEecCCcEE-EEE
Q 007140 83 ICLNAVFGSFVWVNNSTLL-IFT 104 (616)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l-~~~ 104 (616)
.. ....+.|+|||+.| +++
T Consensus 82 ~g---~~~~~~~spdg~~l~~~~ 101 (365)
T 1jof_A 82 GG---HPRANDADTNTRAIFLLA 101 (365)
T ss_dssp CS---SGGGGCTTSCCEEEEEEE
T ss_pred CC---CCccEEECCCCCEEEEEE
Confidence 00 13457899999974 444
No 70
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.00 E-value=2.3e-07 Score=93.90 Aligned_cols=197 Identities=12% Similarity=0.066 Sum_probs=105.3
Q ss_pred CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 174 PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 174 ~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
...+..++|||||++|+....+ ..|.+||+.+++. +.+... ......+.|+|+
T Consensus 127 ~~~V~~v~~spdg~~l~sgs~d-------------~~i~iwd~~~~~~~~~~~~h-------------~~~V~~~~~~~~ 180 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGSKD-------------ICIKVWDLAQQVVLSSYRAH-------------AAQVTCVAASPH 180 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECSS
T ss_pred CCCEEEEEECCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCc-------------CCceEEEEecCC
Confidence 3457789999999999877643 2688999986643 333321 111235789999
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ecc--ccccccceeecCCCc-eEEEeeeccCccEEEEE
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK--LDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWL 328 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~--~~~~~~~~~wspDg~-~l~~~~~~~~~~~~l~~ 328 (616)
+...++-. . ....+.+|+. ..++... +.. .......+.|+|++. .|+... . ++ .|.+
T Consensus 181 ~~~~l~s~-s-----------~D~~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~-~-dg--~v~~ 241 (344)
T 4gqb_B 181 KDSVFLSC-S-----------EDNRILLWDT---RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD-E-NG--TVSL 241 (344)
T ss_dssp CTTEEEEE-E-----------TTSCEEEEET---TSSSCEEECC----CCCEEEEEECSSCTTEEEEEE-T-TS--EEEE
T ss_pred CCCceeee-c-----------cccccccccc---cccceeeeeecceeeccceeeeecCCCCcceEEec-c-CC--cEEE
Confidence 87533221 1 1234666676 4444433 321 223355788999754 455433 2 23 5677
Q ss_pred EeCCCCCCCceEEee--cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCc
Q 007140 329 VCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (616)
Q Consensus 329 ~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (616)
+|+.+++ ....+.. ..+.. ++|+|+|..+++....++ ..++ +|+.+++
T Consensus 242 wd~~~~~-~~~~~~~h~~~v~~---------v~fsp~g~~~lasgs~D~--~i~v------------------wd~~~~~ 291 (344)
T 4gqb_B 242 VDTKSTS-CVLSSAVHSQCVTG---------LVFSPHSVPFLASLSEDC--SLAV------------------LDSSLSE 291 (344)
T ss_dssp EESCC---CCEEEECCSSCEEE---------EEECSSSSCCEEEEETTS--CEEE------------------ECTTCCE
T ss_pred EECCCCc-EEEEEcCCCCCEEE---------EEEccCCCeEEEEEeCCC--eEEE------------------EECCCCc
Confidence 7887742 2222321 11222 889999866555443221 3333 4676665
Q ss_pred eeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCC
Q 007140 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (616)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~ 460 (616)
..++. .. ...+.. ..|+|++..++.+.+... .|.+.++.
T Consensus 292 ~~~~~-~H----~~~V~~-------v~~sp~~~~llas~s~D~---~v~~w~v~ 330 (344)
T 4gqb_B 292 LFRSQ-AH----RDFVRD-------ATWSPLNHSLLTTVGWDH---QVVHHVVP 330 (344)
T ss_dssp EEEEC-CC----SSCEEE-------EEECSSSTTEEEEEETTS---CEEEEECC
T ss_pred EEEEc-CC----CCCEEE-------EEEeCCCCeEEEEEcCCC---eEEEEECC
Confidence 44331 11 122222 357888877776665432 34445543
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.1e-06 Score=90.69 Aligned_cols=292 Identities=11% Similarity=0.133 Sum_probs=151.9
Q ss_pred cccceEEccCCC-eEEEEEeeccccccCCCceeEEEEEC----CCCc-------eEecccCCCcc-----ccccccceEE
Q 007140 32 KINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA----ETGE-------AKPLFESPDIC-----LNAVFGSFVW 94 (616)
Q Consensus 32 ~~~~~~~SPDG~-~iaf~~~~~~~~~~~~~~~~l~v~~~----~~g~-------~~~lt~~~~~~-----~~~~~~~~~w 94 (616)
.+..+.|||||+ .||.... ...|.++++ .+++ ...+....... -...+..+.|
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEK----------NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp CCSEEEECSSCTTEEEEEET----------BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred ceEEEEECCCCCcEEEEecC----------CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 588999999999 7776542 246666677 6666 22222210000 0112568899
Q ss_pred ecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecC-
Q 007140 95 VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG- 172 (616)
Q Consensus 95 spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~- 172 (616)
+||++.|+.... ...|.+++.+++ ...+.
T Consensus 117 s~~~~~l~~~~~-------------------------------------------------dg~i~i~~~~~~~~~~~~~ 147 (425)
T 1r5m_A 117 SHDGNSIVTGVE-------------------------------------------------NGELRLWNKTGALLNVLNF 147 (425)
T ss_dssp CTTSSEEEEEET-------------------------------------------------TSCEEEEETTSCEEEEECC
T ss_pred cCCCCEEEEEeC-------------------------------------------------CCeEEEEeCCCCeeeeccC
Confidence 999998877421 123445555553 33343
Q ss_pred CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCC-C-ccccCccCCCCccee
Q 007140 173 TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDI-P-VCYNSVREGMRSISW 249 (616)
Q Consensus 173 ~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~-~-~~~~~~~~~~~~~~w 249 (616)
....+..++|+|+++.|+....+ ..+.+||+..++. ..+......... . ............+.|
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (425)
T 1r5m_A 148 HRAPIVSVKWNKDGTHIISMDVE-------------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEW 214 (425)
T ss_dssp CCSCEEEEEECTTSSEEEEEETT-------------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEE
T ss_pred CCccEEEEEECCCCCEEEEEecC-------------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEE
Confidence 23456789999999998877643 3688999875543 333221100000 0 000000000235778
Q ss_pred ecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEE
Q 007140 250 RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (616)
Q Consensus 250 spdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (616)
+|++. ++.. .....+++++. ..++.. .+.........+.|+||+..|+.... ++ .|.+
T Consensus 215 ~~~~~--~~~~------------~~~g~i~~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~--~i~i 273 (425)
T 1r5m_A 215 VDDDK--FVIP------------GPKGAIFVYQI---TEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD--DG--TLRI 273 (425)
T ss_dssp EETTE--EEEE------------CGGGCEEEEET---TCSSCSEEECCCSSCEEEEEEETTTTEEEEEET--TS--CEEE
T ss_pred cCCCE--EEEE------------cCCCeEEEEEc---CCCceeeeeccCCCceEEEEECCCCCEEEEEcC--CC--EEEE
Confidence 88754 3222 12345666676 433333 33334455678899999987665542 23 4777
Q ss_pred EeCCCCCCCceEEee--cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCc
Q 007140 329 VCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (616)
Q Consensus 329 ~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (616)
+|+..++ ....+.. ..+. .+.|+++| .++... .+ + .+. .+|+.+++
T Consensus 274 ~d~~~~~-~~~~~~~~~~~i~---------~~~~~~~~-~l~~~~-~d---~-~i~----------------i~d~~~~~ 321 (425)
T 1r5m_A 274 WHGGNGN-SQNCFYGHSQSIV---------SASWVGDD-KVISCS-MD---G-SVR----------------LWSLKQNT 321 (425)
T ss_dssp ECSSSBS-CSEEECCCSSCEE---------EEEEETTT-EEEEEE-TT---S-EEE----------------EEETTTTE
T ss_pred EECCCCc-cceEecCCCccEE---------EEEECCCC-EEEEEe-CC---C-cEE----------------EEECCCCc
Confidence 7877632 2222211 1122 27899998 444333 11 2 222 25666665
Q ss_pred eeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCc
Q 007140 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (616)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~ 463 (616)
......... ..+.. ..+++++..++.... -..|.++++..++
T Consensus 322 ~~~~~~~~~----~~i~~-------~~~s~~~~~l~~~~~----dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 322 LLALSIVDG----VPIFA-------GRISQDGQKYAVAFM----DGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEECTT----CCEEE-------EEECTTSSEEEEEET----TSCEEEEECHHHH
T ss_pred EeEecccCC----ccEEE-------EEEcCCCCEEEEEEC----CCeEEEEECCCCc
Confidence 444333221 12222 347888876654432 2468888876543
No 72
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.98 E-value=1e-07 Score=96.03 Aligned_cols=123 Identities=11% Similarity=-0.002 Sum_probs=71.6
Q ss_pred ceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 007140 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (616)
Q Consensus 35 ~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~ 114 (616)
.+.++++++.++... ....|+++|+++++.......... .....+.|+|||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~----------~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~-------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN----------YPNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNN-------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEE----------TTTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEET--------
T ss_pred cccccCCCEEEEEeC----------CCCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeC--------
Confidence 456777776433322 247899999999876544333220 01457899999997766421
Q ss_pred CcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ecCCCC-------ceeeeeECCC
Q 007140 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA-------VYTAVEPSPD 185 (616)
Q Consensus 115 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~~-------~~~~~~~SpD 185 (616)
....|+++|+ +++.. .+.... ....++||||
T Consensus 63 ----------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 63 ----------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp ----------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred ----------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence 1245777787 45433 232111 2357899999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
|++|++........ .-.+......|+++|+.++
T Consensus 103 g~~l~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 103 GKEVYATVNPTQRL-NDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp SSEEEEEEEEEEEC-SSCEEECCCEEEEEEGGGG
T ss_pred CCEEEEEccccccc-ccccccCCCeEEEEECCCc
Confidence 99999886431000 0000001247899998754
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.96 E-value=3.8e-06 Score=83.20 Aligned_cols=193 Identities=13% Similarity=0.181 Sum_probs=118.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|||||++|+.... ...|.++++.+++........... +..+.|+||++.|+....
T Consensus 25 ~v~~~~~s~~~~~l~s~~~----------dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~----- 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSA----------DKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSNLLVSASD----- 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred cEEEEEECCCCCEEEEeeC----------CCeEEEEeCCCcccchhhccCCCc----eEEEEEcCCCCEEEEECC-----
Confidence 5788999999998877653 246777798887755443222222 668999999998776421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...|.++|+ +++ ...+. ....+..+.|+|+++.
T Consensus 86 --------------------------------------------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 86 --------------------------------------------DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp --------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred --------------------------------------------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 134566676 444 23332 2335668899999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
|+....+ ..+.+||+..+ ....+... ......+.|+|+++. |+ ...
T Consensus 122 l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~-l~-~~~----- 168 (312)
T 4ery_A 122 IVSGSFD-------------ESVRIWDVKTGKCLKTLPAH-------------SDPVSAVHFNRDGSL-IV-SSS----- 168 (312)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCC-------------SSCEEEEEECTTSSE-EE-EEE-----
T ss_pred EEEEeCC-------------CcEEEEECCCCEEEEEecCC-------------CCcEEEEEEcCCCCE-EE-EEe-----
Confidence 8877543 36889998754 34443321 011235789999873 32 211
Q ss_pred cccccCCCceeEeccCCCCCCCCce-Eec-cccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPE-ILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~-~l~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
....+.+|+. ..++.. .+. ........+.|+||+..|+.... ++ .|.++|+.+
T Consensus 169 ------~d~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~--~i~iwd~~~ 223 (312)
T 4ery_A 169 ------YDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL--DN--TLKLWDYSK 223 (312)
T ss_dssp ------TTSCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET--TT--EEEEEETTT
T ss_pred ------CCCcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEcC--CC--eEEEEECCC
Confidence 2235666676 433332 222 22234566899999998766542 23 577788876
No 74
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.96 E-value=3.6e-07 Score=92.47 Aligned_cols=251 Identities=8% Similarity=0.003 Sum_probs=141.3
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLN 86 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~ 86 (616)
|.+-++.. ++...... .....+..+.|+|||++|+.... ...|.++++.+++.........
T Consensus 56 i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~---- 116 (369)
T 3zwl_B 56 ASVWYSLN----GERLGTLD-GHTGTIWSIDVDCFTKYCVTGSA----------DYSIKLWDVSNGQCVATWKSPV---- 116 (369)
T ss_dssp EEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECSS----
T ss_pred EEEEeCCC----chhhhhhh-hcCCcEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCcEEEEeecCC----
Confidence 55666643 44333221 12225789999999999876642 3578888999888665544332
Q ss_pred ccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-C
Q 007140 87 AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D 165 (616)
Q Consensus 87 ~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~ 165 (616)
.+..+.|+|+++.|+....... . ....|.++++ .
T Consensus 117 -~v~~~~~~~~~~~l~~~~~~~~--------------------~------------------------~~g~i~~~d~~~ 151 (369)
T 3zwl_B 117 -PVKRVEFSPCGNYFLAILDNVM--------------------K------------------------NPGSINIYEIER 151 (369)
T ss_dssp -CEEEEEECTTSSEEEEEECCBT--------------------T------------------------BCCEEEEEEEEE
T ss_pred -CeEEEEEccCCCEEEEecCCcc--------------------C------------------------CCCEEEEEEecC
Confidence 2668999999998877532100 0 0112233332 1
Q ss_pred C------------Ceeec-CCCC--ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC-ce-EEEecCCC
Q 007140 166 G------------TAKDF-GTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KL-VRELCDLP 228 (616)
Q Consensus 166 g------------~~~~l-~~~~--~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~ 228 (616)
+ ....+ .... .+..++|+|||+.|+....+ ..|.+||+.. .+ ...+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~- 217 (369)
T 3zwl_B 152 DSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSIDLH- 217 (369)
T ss_dssp CTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEECC-
T ss_pred CccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEecC-
Confidence 1 11111 1111 46689999999998887543 3688999875 33 3333321
Q ss_pred CCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecC
Q 007140 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD 308 (616)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wsp 308 (616)
......+.|+||++. |+.. .....+.+|+. ..++.............+.|+|
T Consensus 218 ------------~~~v~~~~~~~~~~~-l~~~------------~~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~~~ 269 (369)
T 3zwl_B 218 ------------EKSISDMQFSPDLTY-FITS------------SRDTNSFLVDV---STLQVLKKYETDCPLNTAVITP 269 (369)
T ss_dssp ------------SSCEEEEEECTTSSE-EEEE------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECS
T ss_pred ------------CCceeEEEECCCCCE-EEEe------------cCCceEEEEEC---CCCceeeeecCCCCceeEEecC
Confidence 011235889999873 3322 12345777777 5445444444455667889999
Q ss_pred CCceEEEeeecc----------CccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 309 DSLALVNETWYK----------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 309 Dg~~l~~~~~~~----------~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
++..++...... .+...+.++|+.++ +....+..... .. ..++|+|+|+.|+...
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~-~v-----~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--EEIGRVQGHFG-PL-----NTVAISPQGTSYASGG 334 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTTC--CEEEEEECCSS-CE-----EEEEECTTSSEEEEEE
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--cchhheecccC-cE-----EEEEECCCCCEEEEEc
Confidence 998766543211 01125667777663 22222211110 01 1288999999776554
No 75
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.94 E-value=1.8e-06 Score=86.25 Aligned_cols=160 Identities=17% Similarity=0.080 Sum_probs=90.5
Q ss_pred eEEEEeC-CCC-eeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCC
Q 007140 158 QLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDI 233 (616)
Q Consensus 158 ~l~~~d~-~g~-~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~ 233 (616)
.|.++|+ +++ ...+... ..+..++|||||+.|+..... ..+.+|++..++ ...+...
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d-------------g~v~i~~~~~~~~~~~~~~~------ 163 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV-------------GKVNIFGVESGKKEYSLDTR------ 163 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT-------------SEEEEEETTTCSEEEEEECS------
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------------CcEEEEEcCCCceeEEecCC------
Confidence 5666677 453 3344322 244578999999999877542 368889987543 3333221
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCce
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLA 312 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~ 312 (616)
......+.|+|||+. |+.. . ....+.+|+. ..++.. .+......+..+.|+||+..
T Consensus 164 -------~~~v~~~~~spdg~~-lasg-~-----------~dg~i~iwd~---~~~~~~~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 164 -------GKFILSIAYSPDGKY-LASG-A-----------IDGIINIFDI---ATGKLLHTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp -------SSCEEEEEECTTSSE-EEEE-E-----------TTSCEEEEET---TTTEEEEEECCCSSCCCEEEECTTSCE
T ss_pred -------CceEEEEEECCCCCE-EEEE-c-----------CCCeEEEEEC---CCCcEEEEEcccCCceeEEEEcCCCCE
Confidence 011235889999983 3322 1 2235666776 444332 23334455678999999998
Q ss_pred EEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 313 l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
|+.... ++ .|.++|+.++ +....+...... . ..++|+|+|+.|+...
T Consensus 221 l~s~s~--dg--~i~iwd~~~~--~~~~~~~~h~~~-v-----~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 221 LVTASD--DG--YIKIYDVQHA--NLAGTLSGHASW-V-----LNVAFCPDDTHFVSSS 267 (321)
T ss_dssp EEEECT--TS--CEEEEETTTC--CEEEEECCCSSC-E-----EEEEECTTSSEEEEEE
T ss_pred EEEEcC--CC--eEEEEECCCc--ceeEEEcCCCCc-e-----EEEEECCCCCEEEEEe
Confidence 776542 23 3666677663 222222111100 0 1288999999876554
No 76
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.93 E-value=1.3e-06 Score=94.14 Aligned_cols=254 Identities=14% Similarity=0.123 Sum_probs=134.8
Q ss_pred CCCCcccceEEcc----CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc-------cccccceEEec
Q 007140 28 PDGAKINFVSWSP----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL-------NAVFGSFVWVN 96 (616)
Q Consensus 28 ~~~~~~~~~~~SP----DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~-------~~~~~~~~wsp 96 (616)
+.+.......||| ||++|+.... ....|.++|..+++..+......... ...+..+.+||
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~~---------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGAY---------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEE---------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEEc---------cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 3444577899999 9998665442 23678889999888654432211000 00134677888
Q ss_pred CCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-ee--ecC
Q 007140 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AK--DFG 172 (616)
Q Consensus 97 dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~--~l~ 172 (616)
+++.+++... ...+|+++|+ +++ .. .+.
T Consensus 290 ~~~~~~vs~~------------------------------------------------~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 290 EHPEFIVNVK------------------------------------------------ETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp SSSEEEEEET------------------------------------------------TTTEEEEEECTTSSSCEEEEEE
T ss_pred CCCEEEEEEC------------------------------------------------CCCeEEEEEecCCCcceeEEec
Confidence 8877665411 1246777887 432 22 333
Q ss_pred CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCccee-ec
Q 007140 173 TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISW-RA 251 (616)
Q Consensus 173 ~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~w-sp 251 (616)
.......+.|||||+++++.... ...|.+||+.+++........ ..| ...+...| +|
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~------------~~~v~v~D~~tg~l~~~i~~g---~~p-------h~g~g~~~~~p 379 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANN------------SNKVAVIDSKDRRLSALVDVG---KTP-------HPGRGANFVHP 379 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECS---SSB-------CCTTCEEEEET
T ss_pred cCcCccCceECCCCCEEEEEecC------------CCeEEEEECCCCeEEEeeccC---CCC-------CCCCCcccCCC
Confidence 34455688999999998877543 236889999866543322110 000 00122333 57
Q ss_pred CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCC----CCc-eEeccccccccceeecCCCceEEEeeeccC---cc
Q 007140 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG----EKP-EILHKLDLRFRSVSWCDDSLALVNETWYKT---SQ 323 (616)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~----g~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~---~~ 323 (616)
++.. + |+... ...+.+.+++.++-.. .+. +.+.........+.++|||+.|+....... ..
T Consensus 380 ~~g~-~-~~s~~---------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 380 KYGP-V-WSTSH---------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp TTEE-E-EEEEB---------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred CCcc-E-EEecc---------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccC
Confidence 7442 3 33110 0123455566622000 122 233333334467889999998776541110 12
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCC--CCeeeCCCCCEEEEEee
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS--PMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~s~dgk~l~~~~~ 372 (616)
..|.++|+++.+...+.|.-..+.. ...++. ..+++++||+.|++...
T Consensus 449 ~~v~v~d~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 449 QSVAVFDLKNLDAKYQVLPIAEWAD-LGEGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp TCEEEEETTCTTSCCEEECHHHHHC-CCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred ceEEEEECCCCCCCeEEeechhhcc-cCCCCCceEeccCCCCCCEEEEEee
Confidence 2688899987532213331000000 000000 12889999999998764
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.93 E-value=3.5e-07 Score=103.70 Aligned_cols=232 Identities=13% Similarity=0.122 Sum_probs=137.5
Q ss_pred ceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcE
Q 007140 21 EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTL 100 (616)
Q Consensus 21 ~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~ 100 (616)
.+.++.... .+..+.|||||++||.... ...|.+|++.+|+........... +..+.|+||++.
T Consensus 6 ~~~~~~h~~--~v~~i~~sp~~~~la~~~~----------~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~ 69 (814)
T 3mkq_A 6 KKTFSNRSD--RVKGIDFHPTEPWVLTTLY----------SGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARKNW 69 (814)
T ss_dssp EEEEEEECS--CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTE
T ss_pred ceeeecCCC--ceEEEEECCCCCEEEEEeC----------CCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCCCE
Confidence 344443333 4889999999999998753 357888899888654332222222 678999999998
Q ss_pred EEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCce
Q 007140 101 LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVY 177 (616)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~ 177 (616)
|+.... ...|.++|+ +++ ...+. ....+
T Consensus 70 l~~~~~-------------------------------------------------dg~i~vw~~~~~~~~~~~~~~~~~v 100 (814)
T 3mkq_A 70 IIVGSD-------------------------------------------------DFRIRVFNYNTGEKVVDFEAHPDYI 100 (814)
T ss_dssp EEEEET-------------------------------------------------TSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEEeC-------------------------------------------------CCeEEEEECCCCcEEEEEecCCCCE
Confidence 887521 135677777 554 33343 33457
Q ss_pred eeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-e-EEEecCCCCCCCCCccccCccCCCCcceeec-CCC
Q 007140 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-L-VRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKP 254 (616)
Q Consensus 178 ~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-dg~ 254 (616)
..++|||||++|+....+ ..+.+|++.++ . ...+.... .....+.|+| ++.
T Consensus 101 ~~~~~s~~~~~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPS 154 (814)
T ss_dssp EEEEECSSSSEEEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEE
T ss_pred EEEEEeCCCCEEEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCC
Confidence 789999999998877543 36888888754 3 23332210 1123578999 654
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eeccc-cccccceeecC--CCceEEEeeeccCccEEEEEEe
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL-DLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVC 330 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~-~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~l~~~d 330 (616)
.|+.. . ....+.+|+. .++... .+... ......+.|+| |+..++.... ++ .|.++|
T Consensus 155 -~l~~~-~-----------~dg~v~vwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--dg--~i~~~d 214 (814)
T 3mkq_A 155 -TFASG-C-----------LDRTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD--DL--TIKIWD 214 (814)
T ss_dssp -EEEEE-E-----------TTSEEEEEET---TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT--TS--EEEEEE
T ss_pred -EEEEE-e-----------CCCeEEEEEC---CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC--CC--EEEEEE
Confidence 23322 1 2235666675 433332 23322 24567789998 8877666442 23 577788
Q ss_pred CCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 331 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
+.++ +....+...... . ..+.|+|+|+.++...
T Consensus 215 ~~~~--~~~~~~~~~~~~-v-----~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 215 YQTK--SCVATLEGHMSN-V-----SFAVFHPTLPIIISGS 247 (814)
T ss_dssp TTTT--EEEEEEECCSSC-E-----EEEEECSSSSEEEEEE
T ss_pred CCCC--cEEEEEcCCCCC-E-----EEEEEcCCCCEEEEEe
Confidence 8763 222212211110 0 1278999999776554
No 78
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=98.92 E-value=4.2e-09 Score=108.96 Aligned_cols=121 Identities=10% Similarity=0.056 Sum_probs=84.6
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCC-------CccCCCCCchHHHHh
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-------NEFSGMTPTSSLIFL 552 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~la 552 (616)
...+.+++++.||.+++|+|++|.+.. .|.|+||+.|+... ......+.+ ..|........+.||
T Consensus 90 ~~~e~v~~~~~~g~~l~~~l~~P~~~~----~~~P~Vv~~HG~g~----~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la 161 (398)
T 3nuz_A 90 YRLEKWEFYPLPKCVSTFLVLIPDNIN----KPVPAILCIPGSGG----NKEGLAGEPGIAPKLNDRYKDPKLTQALNFV 161 (398)
T ss_dssp EEEEEEEECCSTTBCEEEEEEEESSCC----SCEEEEEEECCTTC----CHHHHHTCCCSSSTTCCSTTCTTTCHHHHHH
T ss_pred EEEEEEEEEcCCCcEEEEEEEeCCCCC----CCccEEEEEcCCCC----CcccccccccccccccccccchHHHHHHHHH
Confidence 477889999999999999999998752 24588888854210 000000000 011100013578999
Q ss_pred hCCeEEEE-CCCCCccccCCCc-------------------cCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 553 ARRFAVLA-GPSIPIIGEGDKL-------------------PNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 553 ~~Gy~Vl~-n~R~GS~GyG~~f-------------------~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
++||+|+. |+| |....+... ....++..+..|++++++||.+++.+|++||+|++.
T Consensus 162 ~~Gy~Vl~~D~r-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~ 237 (398)
T 3nuz_A 162 KEGYIAVAVDNP-AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGF 237 (398)
T ss_dssp TTTCEEEEECCT-TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEE
T ss_pred HCCCEEEEecCC-CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 99999999 999 876665443 113556678899999999999999999999999874
No 79
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.89 E-value=2.1e-07 Score=96.34 Aligned_cols=299 Identities=9% Similarity=0.125 Sum_probs=150.5
Q ss_pred cccceEEccCCCeEEEEEeeccc-cccCCCceeEEEEECCCCceE-ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEE-DNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~-~~~~~~~~~l~v~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (616)
.+...+|||||+.++++...... ...-.....|.++++.+++.. .+..... ...+..+.|+||++.|+....
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~--- 87 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQV---DSKFNDLDWSHNNKIIAGALD--- 87 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCC---SSCEEEEEECSSSSCEEEEES---
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEec---CCceEEEEECCCCCeEEEEcc---
Confidence 47789999999966666532100 000012356788899877522 2211111 112668999999998877421
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-C---C--CeeecC-CCCceeeeeE
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---G--TAKDFG-TPAVYTAVEP 182 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~---g--~~~~l~-~~~~~~~~~~ 182 (616)
...|.++++ + + ....+. ....+..++|
T Consensus 88 ----------------------------------------------dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 88 ----------------------------------------------NGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp ----------------------------------------------SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred ----------------------------------------------CCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 123444444 2 1 122332 2235678999
Q ss_pred CCC-CcEEEEEeccCCCcccccCcccCccEEEEeCCCce------E-EEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 183 SPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------V-RELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 183 SpD-g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~------~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
+|+ ++.|+....+ ..|.+||+..++ . ..+.... ........+.|+|++.
T Consensus 122 ~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 178 (416)
T 2pm9_A 122 NAKQDNVLASGGNN-------------GEIFIWDMNKCTESPSNYTPLTPGQSM----------SSVDEVISLAWNQSLA 178 (416)
T ss_dssp CSSSTTBEEEECSS-------------SCEEBCBTTTTSSCTTTCCCBCCCCSC----------CSSCCCCEEEECSSCT
T ss_pred cCCCCCEEEEEcCC-------------CeEEEEECCCCcccccccccccccccc----------CCCCCeeEEEeCCCCC
Confidence 999 6666655432 368888987554 1 1111100 0011234689999955
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-eccc------cccccceeecCCCc-eEEEeeeccCccEEE
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL------DLRFRSVSWCDDSL-ALVNETWYKTSQTRT 326 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~------~~~~~~~~wspDg~-~l~~~~~~~~~~~~l 326 (616)
..|+-. .....+.+|+. ..++... +... ......+.|+|++. .++... .+.....|
T Consensus 179 ~~l~~~------------~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~~~i 242 (416)
T 2pm9_A 179 HVFASA------------GSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT-GSDNDPSI 242 (416)
T ss_dssp TEEEEE------------SSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE-CCSSSCCC
T ss_pred cEEEEE------------cCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE-CCCCCceE
Confidence 433322 12335666676 4333322 2222 34567789999975 444433 22111146
Q ss_pred EEEeCCCCCCCceEEee-cccccccCCCCCCCeeeCC-CCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCC
Q 007140 327 WLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 404 (616)
Q Consensus 327 ~~~d~~~~~~~~~~l~~-~~~~~~~~~~g~~~~~~s~-dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~ 404 (616)
.++|+.++. .+...+. .... .. ..+.|+| +++.++.... + ....+ +|+.+
T Consensus 243 ~~~d~~~~~-~~~~~~~~~~~~-~v-----~~~~~s~~~~~~l~s~~~-d--g~v~~------------------wd~~~ 294 (416)
T 2pm9_A 243 LIWDLRNAN-TPLQTLNQGHQK-GI-----LSLDWCHQDEHLLLSSGR-D--NTVLL------------------WNPES 294 (416)
T ss_dssp CEEETTSTT-SCSBCCCSCCSS-CE-----EEEEECSSCSSCEEEEES-S--SEEEE------------------ECSSS
T ss_pred EEEeCCCCC-CCcEEeecCccC-ce-----eEEEeCCCCCCeEEEEeC-C--CCEEE------------------eeCCC
Confidence 667777631 2221121 1110 00 1288998 7877665542 1 12222 46666
Q ss_pred CceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCc
Q 007140 405 GSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (616)
Q Consensus 405 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~ 463 (616)
++....+.... ..+. ...|++++..++++.+. -..|.+.++..++
T Consensus 295 ~~~~~~~~~~~----~~v~-------~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 295 AEQLSQFPARG----NWCF-------KTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp CCEEEEEECSS----SCCC-------CEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred CccceeecCCC----CceE-------EEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 65433332211 1111 23578887445555443 3557788876654
No 80
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.87 E-value=3.6e-07 Score=91.96 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=53.4
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc-
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC- 84 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~- 84 (616)
.|++.++.. ++.......+.......+.|||||+++++... ....|+++++++++...........
T Consensus 22 ~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---------~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 22 NLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---------HYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp EEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEET---------TTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred eEEEEECCC----CcEEEEEecCCCCCCceeEECCCCCEEEEEeC---------CCCcEEEEeCCCCcEEEEEEcccccc
Confidence 466777643 55544332333113678999999997666542 3478999999988765433222100
Q ss_pred -ccccccceEEecCCcEEEEE
Q 007140 85 -LNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 85 -~~~~~~~~~wspdg~~l~~~ 104 (616)
.......+.|+|||+.|++.
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEE
T ss_pred cccccccceEECCCCCEEEEE
Confidence 00114578999999998885
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.6e-06 Score=89.55 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=121.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|||||++|+.... ...|.+++..+.....+..+.. . +..+.|+|+++.|+....+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~----------dg~i~i~~~~~~~~~~~~~~~~-~----v~~~~~~~~~~~l~~~~~d---- 170 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVE----------NGELRLWNKTGALLNVLNFHRA-P----IVSVKWNKDGTHIISMDVE---- 170 (425)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSCEEEEETTSCEEEEECCCCS-C----EEEEEECTTSSEEEEEETT----
T ss_pred ceEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCeeeeccCCCc-c----EEEEEECCCCCEEEEEecC----
Confidence 5788999999999887653 2467777854444445533322 2 6689999999988775221
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC----------------C
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG----------------T 173 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~----------------~ 173 (616)
..+.++|+ +++ ...+. .
T Consensus 171 ---------------------------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 171 ---------------------------------------------NVTILWNVISGTVMQHFELKETGGSSINAENHSGD 205 (425)
T ss_dssp ---------------------------------------------CCEEEEETTTTEEEEEECCC---------------
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEeeccccCccceeeccccCC
Confidence 12222333 221 11111 1
Q ss_pred CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 174 PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 174 ~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
...+..+.|+|++. ++.... ...|.+||+..++. ..+... ......+.|+|+
T Consensus 206 ~~~~~~~~~~~~~~-~~~~~~-------------~g~i~~~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~ 258 (425)
T 1r5m_A 206 GSLGVDVEWVDDDK-FVIPGP-------------KGAIFVYQITEKTPTGKLIGH-------------HGPISVLEFNDT 258 (425)
T ss_dssp CCCBSCCEEEETTE-EEEECG-------------GGCEEEEETTCSSCSEEECCC-------------SSCEEEEEEETT
T ss_pred cceeeEEEEcCCCE-EEEEcC-------------CCeEEEEEcCCCceeeeeccC-------------CCceEEEEECCC
Confidence 11256789999865 444432 23688999876532 222211 011235889999
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-eEeccccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
++. |+.. . ....+.+|+. ..++. ..+.........+.|+||+ .++.... ++ .|.++|+
T Consensus 259 ~~~-l~~~-~-----------~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--d~--~i~i~d~ 317 (425)
T 1r5m_A 259 NKL-LLSA-S-----------DDGTLRIWHG---GNGNSQNCFYGHSQSIVSASWVGDD-KVISCSM--DG--SVRLWSL 317 (425)
T ss_dssp TTE-EEEE-E-----------TTSCEEEECS---SSBSCSEEECCCSSCEEEEEEETTT-EEEEEET--TS--EEEEEET
T ss_pred CCE-EEEE-c-----------CCCEEEEEEC---CCCccceEecCCCccEEEEEECCCC-EEEEEeC--CC--cEEEEEC
Confidence 873 3322 1 1235666676 43333 3343345567789999999 5544432 12 6788888
Q ss_pred CCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 332 GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.++ +....+...-. .. ..+.|+|+|+.++...
T Consensus 318 ~~~--~~~~~~~~~~~-~i-----~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 318 KQN--TLLALSIVDGV-PI-----FAGRISQDGQKYAVAF 349 (425)
T ss_dssp TTT--EEEEEEECTTC-CE-----EEEEECTTSSEEEEEE
T ss_pred CCC--cEeEecccCCc-cE-----EEEEEcCCCCEEEEEE
Confidence 763 22222221100 01 1278999999877654
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.86 E-value=2.7e-06 Score=88.88 Aligned_cols=120 Identities=8% Similarity=0.149 Sum_probs=65.8
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-CceEEEecCCCCCCCCCccccCccCCCCcceeecCC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg 253 (616)
..+..++|+|||+.|+.. .+ ..|.+||+. +++...+.... +..+.........+.|+|++
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d-------------~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD-------------LRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS-------------SEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-CC-------------CeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCC
Confidence 356789999999988865 32 268899987 33332221100 00000111123458899998
Q ss_pred CceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-----eEeccccc------------cccceeecCCCceEEEe
Q 007140 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDL------------RFRSVSWCDDSLALVNE 316 (616)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~l~~~~~------------~~~~~~wspDg~~l~~~ 316 (616)
...|+.. . ....+.+|+. ..++. ..+..... .+..+.|+|||..|+..
T Consensus 239 ~~~l~s~-~-----------~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 239 CNTFVYS-S-----------SKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp TTEEEEE-E-----------TTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcEEEEE-e-----------CCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 4333332 1 1234555665 33332 33332222 56788999999987765
Q ss_pred eeccCccEEEEEEeCCC
Q 007140 317 TWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 317 ~~~~~~~~~l~~~d~~~ 333 (616)
.. + .|.++|+..
T Consensus 304 ~~---~--~v~iwd~~~ 315 (447)
T 3dw8_B 304 DY---L--SVKVWDLNM 315 (447)
T ss_dssp ES---S--EEEEEETTC
T ss_pred eC---C--eEEEEeCCC
Confidence 42 2 577777764
No 83
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.86 E-value=2.3e-07 Score=93.81 Aligned_cols=228 Identities=9% Similarity=0.084 Sum_probs=126.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+...+||||++ |+..+ . ...|.+||+++++...........-...+..+.|+|||++|+....
T Consensus 84 ~v~~~~~s~d~~-l~~~s-~---------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~----- 147 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVAS-D---------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK----- 147 (344)
T ss_dssp CEEEEEEETTTE-EEEEE-T---------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-----
T ss_pred CEEEEEEeCCCe-EEEEE-C---------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-----
Confidence 367899999964 44322 1 2467777988876432211100000112668999999998876421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...|.++|+ +++. ..+. ....+..++|+|+++.
T Consensus 148 --------------------------------------------d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 148 --------------------------------------------DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp --------------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred --------------------------------------------CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 124556677 4543 3333 3345678999999987
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
++++.... ..|.+||+..+ ....+..... ......+.|+|++...|+.. .
T Consensus 184 ~l~s~s~D------------~~v~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~p~~~~~l~sg-~----- 234 (344)
T 4gqb_B 184 VFLSCSED------------NRILLWDTRCPKPASQIGCSAP-----------GYLPTSLAWHPQQSEVFVFG-D----- 234 (344)
T ss_dssp EEEEEETT------------SCEEEEETTSSSCEEECC---------------CCCEEEEEECSSCTTEEEEE-E-----
T ss_pred ceeeeccc------------cccccccccccceeeeeeccee-----------eccceeeeecCCCCcceEEe-c-----
Confidence 66654332 36889998754 3444322100 00122478888766433221 1
Q ss_pred cccccCCCceeEeccCCCCCCCCc-eEeccccccccceeecCCCce-EEEeeeccCccEEEEEEeCCCCCCCceEEee--
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFD-- 343 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~-- 343 (616)
....+.+|+. ..++. ..+......+..+.|+||+.. |+... . ++ .|.+.|+.++ +...+..
T Consensus 235 ------~dg~v~~wd~---~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs-~-D~--~i~vwd~~~~--~~~~~~~H~ 299 (344)
T 4gqb_B 235 ------ENGTVSLVDT---KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS-E-DC--SLAVLDSSLS--ELFRSQAHR 299 (344)
T ss_dssp ------TTSEEEEEES---CC--CCEEEECCSSCEEEEEECSSSSCCEEEEE-T-TS--CEEEECTTCC--EEEEECCCS
T ss_pred ------cCCcEEEEEC---CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe-C-CC--eEEEEECCCC--cEEEEcCCC
Confidence 2235666776 44433 334444556778999999864 55443 2 23 4666687762 2222211
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 344 ~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
..+.. ++|+|+|+.+++...
T Consensus 300 ~~V~~---------v~~sp~~~~llas~s 319 (344)
T 4gqb_B 300 DFVRD---------ATWSPLNHSLLTTVG 319 (344)
T ss_dssp SCEEE---------EEECSSSTTEEEEEE
T ss_pred CCEEE---------EEEeCCCCeEEEEEc
Confidence 11222 899999987766554
No 84
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.86 E-value=5.4e-07 Score=93.43 Aligned_cols=221 Identities=8% Similarity=0.021 Sum_probs=124.8
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...++|||||++|+.... ...|+++++.+++......... ......|++|++.|+....
T Consensus 59 ~~~~~~s~~g~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~------ 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARL----------DGHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTT------ 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEE----------TTEEEEEECCSEETTTTSCSCC-----EEEEEEECSSSCEEEEEET------
T ss_pred ccceeeeecCCeEEEEEc----------CCcEEEEEecccceeeEEecCC-----ceEEEEEecCCCEEEEEEC------
Confidence 347899999999887764 2578888988765443322221 1334578899998777421
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeec--CCCCceeeeeECCCCcEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF--GTPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l--~~~~~~~~~~~SpDg~~i 189 (616)
...|.++|+ +++...+ .....+..++|+||++.|
T Consensus 118 -------------------------------------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 118 -------------------------------------------EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp -------------------------------------------TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred -------------------------------------------CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 134556666 4444433 233467789999999988
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
+....+ ..+.+||+..+ ....+... ......+.|+||++. |+.. ..
T Consensus 155 ~s~s~d-------------~~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~-l~s~-~~----- 201 (420)
T 3vl1_A 155 ISSSQD-------------MQLKIWSVKDGSNPRTLIGH-------------RATVTDIAIIDRGRN-VLSA-SL----- 201 (420)
T ss_dssp EEEETT-------------SEEEEEETTTCCCCEEEECC-------------SSCEEEEEEETTTTE-EEEE-ET-----
T ss_pred EEEeCC-------------CeEEEEeCCCCcCceEEcCC-------------CCcEEEEEEcCCCCE-EEEE-cC-----
Confidence 877543 36889998744 44444321 111345889999873 3322 11
Q ss_pred ccccCCCceeEeccCCCCCCCCceE-ecc------------------------ccccccceeecCCCceEEEeeeccCcc
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEI-LHK------------------------LDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~-l~~------------------------~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
...+.+|+. ..++... +.. .......+.|+||+..|+.... ++
T Consensus 202 ------d~~v~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg- 269 (420)
T 3vl1_A 202 ------DGTIRLWEC---GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV--SG- 269 (420)
T ss_dssp ------TSCEEEEET---TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET--TS-
T ss_pred ------CCcEEEeEC---CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC--CC-
Confidence 123444444 2222211 110 1133456789999987766542 23
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCC-EEEEE
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT-NVIAK 370 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk-~l~~~ 370 (616)
.|.++|+.++ +............. ..++|+|+|+ .++..
T Consensus 270 -~i~i~d~~~~--~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 270 -VITVHNVFSK--EQTIQLPSKFTCSC-----NSLTVDGNNANYIYAG 309 (420)
T ss_dssp -CEEEEETTTC--CEEEEECCTTSSCE-----EEEEECSSCTTEEEEE
T ss_pred -eEEEEECCCC--ceeEEcccccCCCc-----eeEEEeCCCCCEEEEE
Confidence 4777788763 22211111111111 1289999998 55544
No 85
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.86 E-value=2.5e-06 Score=86.17 Aligned_cols=197 Identities=14% Similarity=0.177 Sum_probs=109.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceE--ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~--~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (616)
.+...+|||||+.||.... + ..|.++++.+++.. .+..... ...+..+.|+|||+.|+....+
T Consensus 18 ~v~~l~~sp~g~~las~~~--------D--~~i~iw~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g~~l~s~s~D-- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG--------D--RRIRIWGTEGDSWICKSVLSEGH---QRTVRKVAWSPCGNYLASASFD-- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEET--------T--SCEEEEEEETTEEEEEEEECSSC---SSCEEEEEECTTSSEEEEEETT--
T ss_pred cEEEEEECCCCCEEEEEcC--------C--CeEEEEEcCCCcceeeeeecccc---CCcEEEEEECCCCCEEEEEECC--
Confidence 3668899999999887653 3 45566677666432 2111111 1126689999999988774211
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC---eeecC-CCCceeeeeECC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFG-TPAVYTAVEPSP 184 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~---~~~l~-~~~~~~~~~~Sp 184 (616)
..+.++++ .++ ...+. ....+..++|||
T Consensus 83 -----------------------------------------------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 83 -----------------------------------------------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp -----------------------------------------------SCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 11222333 121 12232 233567899999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEee
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (616)
||+.|+....+ ..+.+||+..+ ....+..+... ......+.|+|+++. |+-. .
T Consensus 116 ~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~~h----------~~~v~~~~~~p~~~~-l~s~-s- 169 (345)
T 3fm0_A 116 SGNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLNSH----------TQDVKHVVWHPSQEL-LASA-S- 169 (345)
T ss_dssp TSSEEEEEETT-------------SCEEEEEECTTSCEEEEEEECCC----------CSCEEEEEECSSSSC-EEEE-E-
T ss_pred CCCEEEEEECC-------------CeEEEEECCCCCCeEEEEEecCc----------CCCeEEEEECCCCCE-EEEE-e-
Confidence 99998877643 25888887643 22222111100 011235789999873 3322 1
Q ss_pred cCCCcccccCCCceeEeccCCCCCCCCce---EeccccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
....+.+|+. ..++.. .+......+..+.|+|||..|+.... ++..+||....
T Consensus 170 ----------~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~--D~~v~iW~~~~ 225 (345)
T 3fm0_A 170 ----------YDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD--DRTVRIWRQYL 225 (345)
T ss_dssp ----------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEEEC
T ss_pred ----------CCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC--CCeEEEecccc
Confidence 1223444454 222221 23333445678899999998776542 35567876544
No 86
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=98.86 E-value=9.2e-09 Score=110.24 Aligned_cols=118 Identities=11% Similarity=0.085 Sum_probs=81.8
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEec--ccCcccccccCCccc-----CC---CCccCCCCCchHHH
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWA--YPEDYKSKDAAGQVR-----GS---PNEFSGMTPTSSLI 550 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~--~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~q~ 550 (616)
..+.+.++.+||.+|.++||+|.+- + |.|+||.. |++.. +.....+. -+ ...+..+.....++
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~~---~--~~P~vl~~~pyg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 112 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNKD---G--KFPVVMSADTYGKDN--KPKITNMGALWPTLGTIPTSSFTPEESPDPGF 112 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSSS---S--CEEEEEEEESSCTTC--CCC--CHHHHSGGGCCCCCCTTCCTTSCCHHH
T ss_pred EEEEEEEECCCCcEEEEEEEecCCC---C--CCCEEEEecCCCCCc--ccccccccccccccccccccccccccCCCHHH
Confidence 6677999999999999999999862 3 34888775 33210 00000000 00 00110000023689
Q ss_pred HhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 551 FLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 551 la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
||++||+|+. |+| |+.+.+..|. .++..+.+|+.++++||.+++++| .|||+.+.
T Consensus 113 la~~Gy~vv~~D~R-G~G~S~G~~~--~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~ 168 (560)
T 3iii_A 113 WVPNDYVVVKVALR-GSDKSKGVLS--PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGV 168 (560)
T ss_dssp HGGGTCEEEEEECT-TSTTCCSCBC--TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEE
T ss_pred HHhCCCEEEEEcCC-CCCCCCCccc--cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEcc
Confidence 9999999999 999 9887777665 466789999999999999999999 89999874
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.85 E-value=5.8e-06 Score=84.23 Aligned_cols=205 Identities=12% Similarity=0.110 Sum_probs=105.6
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE-EecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.+..++|||||+++++.+... ...|.+||+.+++.. .+.. . .....+.|+|||+
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-----------d~~i~iwd~~~~~~~~~~~~-~-------------~~V~~v~fspdg~ 189 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-----------PAIMRIIDPSDLTEKFEIET-R-------------GEVKDLHFSTDGK 189 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-----------SCEEEEEETTTTEEEEEEEC-S-------------SCCCEEEECTTSS
T ss_pred CEEEEEEcCCCCEEEEEECCC-----------CCEEEEeECCCCcEEEEeCC-C-------------CceEEEEEccCCc
Confidence 456789999999998876432 236889999866443 3321 0 1134689999998
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eec--cccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
. |+.. . .+.+.+++. ..++.. ... .....+..+.|+||+..++...........++.+++
T Consensus 190 ~-l~s~--s-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 190 V-VAYI--T-----------GSSLEVIST---VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp E-EEEE--C-----------SSCEEEEET---TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred e-EEec--c-----------ceeEEEEEe---ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 3 3332 1 122223332 222322 122 123346678999999986654432223335666666
Q ss_pred CCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeee
Q 007140 332 GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (616)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (616)
... ....+........ ..+...++|+|||++|+.... + ....+ +|+.+++....+
T Consensus 253 ~~~--~~~~~~~~~~~~~--~~~V~~~~~Spdg~~lasgs~-D--~~V~i------------------wd~~~~~~~~~~ 307 (365)
T 4h5i_A 253 KSG--NTSVLRSKQVTNR--FKGITSMDVDMKGELAVLASN-D--NSIAL------------------VKLKDLSMSKIF 307 (365)
T ss_dssp ETT--EEEEEEEEEEESS--CSCEEEEEECTTSCEEEEEET-T--SCEEE------------------EETTTTEEEEEE
T ss_pred ccc--eecceeeeeecCC--CCCeEeEEECCCCCceEEEcC-C--CEEEE------------------EECCCCcEEEEe
Confidence 542 2121110000000 000012789999998776543 1 13333 477776643322
Q ss_pred ecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCC
Q 007140 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (616)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~ 461 (616)
...+ ...+.. ..|+||+..| ++.+.. ..|.+.+++.
T Consensus 308 ~~gH---~~~V~~-------v~fSpdg~~l-aS~S~D---~tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAH---SFAITE-------VTISPDSTYV-ASVSAA---NTIHIIKLPL 343 (365)
T ss_dssp TTSS---SSCEEE-------EEECTTSCEE-EEEETT---SEEEEEECCT
T ss_pred cCcc---cCCEEE-------EEECCCCCEE-EEEeCC---CeEEEEEcCC
Confidence 1111 122332 3589998765 444433 3466666653
No 88
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=98.84 E-value=5.1e-09 Score=114.98 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=82.0
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCC----CchH-HHHhhCC
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT----PTSS-LIFLARR 555 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-q~la~~G 555 (616)
..+.+.++++||.+|+++|++|.+. +++ |+||+.+|- . .+ ......|.... .... ++||++|
T Consensus 36 ~~~~v~i~~~DG~~L~~~l~~P~~~---~~~--PvIl~~hpy--g--~~----~~~~~~~~~~~~~~~~~~~~~~la~~G 102 (652)
T 2b9v_A 36 IKREVMVPMRDGVKLYTVIVIPKNA---RNA--PILLTRTPY--N--AK----GRANRVPNALTMREVLPQGDDVFVEGG 102 (652)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC---CSE--EEEEEEESS--C--HH----HHTCSSTTCSSHHHHSCGGGHHHHHTT
T ss_pred EEEEEEEECCCCcEEEEEEEecCCC---CCc--cEEEEECCC--C--CC----cccccccccccccccccchHHHHHhCC
Confidence 5677899999999999999999875 234 777765321 0 00 00000111000 0123 8999999
Q ss_pred eEEEE-CCCCCccccCCCccC-----ChhH---HHHHHHHHHHHHHHHHc-CCccCCceEEEee
Q 007140 556 FAVLA-GPSIPIIGEGDKLPN-----DRFV---EQLVSSAEAAVEEVVRR-GVGLPILYLNTTA 609 (616)
Q Consensus 556 y~Vl~-n~R~GS~GyG~~f~~-----~~~g---~~~~~D~~~~v~~l~~~-~~vD~~ri~~~~~ 609 (616)
|+||. |+| |+.+++..|.. ++|+ ..+++|+.++++||+++ +++| .|||+.+.
T Consensus 103 yaVv~~D~R-G~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~ 164 (652)
T 2b9v_A 103 YIRVFQDIR-GKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGS 164 (652)
T ss_dssp CEEEEEECT-TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEE
T ss_pred CEEEEEecC-cCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEec
Confidence 99999 999 99999888764 2344 37999999999999999 9999 59999874
No 89
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=98.83 E-value=8.4e-09 Score=99.98 Aligned_cols=124 Identities=7% Similarity=-0.059 Sum_probs=67.7
Q ss_pred CCceeeeeeCCCCCCcccCC-ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCc
Q 007140 461 LKKSSQITNFPHPYPTLASL-QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 539 (616)
Q Consensus 461 ~~~~~~Lt~~~~~~~~~~~~-~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~ 539 (616)
.|+.+.+++.+.. ...+.. ..+.+++ .+||.+|+|+|++|++-. |.|+||+.|+ ++..
T Consensus 10 ~~~~r~~~~~~~~-~~~~~~~~e~~~~~-~~dG~~i~g~l~~P~~~~-----~~p~Vl~~HG--------------~g~~ 68 (259)
T 4ao6_A 10 HGSMRHQMSWNGK-DERKLSVQERGFSL-EVDGRTVPGVYWSPAEGS-----SDRLVLLGHG--------------GTTH 68 (259)
T ss_dssp -------CEECSC-CEEETTEEEEEEEE-EETTEEEEEEEEEESSSC-----CSEEEEEEC-------------------
T ss_pred cCcceeeeccCCC-ccccCCceEEEEEE-eeCCeEEEEEEEeCCCCC-----CCCEEEEeCC--------------Cccc
Confidence 5666666665432 222323 3344444 579999999999998743 3488888833 2111
Q ss_pred cCCCCC-chHHHHhhCCeEEEE-CCCCCccccCCCccC------------------ChhHHHHHHHHHHHHHHHHHcCCc
Q 007140 540 FSGMTP-TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN------------------DRFVEQLVSSAEAAVEEVVRRGVG 599 (616)
Q Consensus 540 ~~~~~~-~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~------------------~~~g~~~~~D~~~~v~~l~~~~~v 599 (616)
-....+ ...+.||++||+|+. |+| |+...+..+.. .......+.|..+++++|.. .+
T Consensus 69 ~~~~~~~~~a~~la~~Gy~Vl~~D~r-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~--~~ 145 (259)
T 4ao6_A 69 KKVEYIEQVAKLLVGRGISAMAIDGP-GHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEA--EE 145 (259)
T ss_dssp ---CHHHHHHHHHHHTTEEEEEECCC-C-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHH--HH
T ss_pred ccchHHHHHHHHHHHCCCeEEeeccC-CCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhh--cc
Confidence 000011 457899999999999 999 97554433321 01112345678888888754 57
Q ss_pred cCCceEEEe
Q 007140 600 LPILYLNTT 608 (616)
Q Consensus 600 D~~ri~~~~ 608 (616)
|++||++++
T Consensus 146 d~~rv~~~G 154 (259)
T 4ao6_A 146 GPRPTGWWG 154 (259)
T ss_dssp CCCCEEEEE
T ss_pred CCceEEEEe
Confidence 999999986
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.82 E-value=3.4e-07 Score=96.65 Aligned_cols=139 Identities=9% Similarity=0.125 Sum_probs=78.2
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce--------EEEecCCCCCCCCCccccCccCCCCcce
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--------VRELCDLPPAEDIPVCYNSVREGMRSIS 248 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 248 (616)
+..++|||||+.|+....+ ..|.+||+.++. .+.+....... ......++
T Consensus 132 v~svafSPDG~~LAsgs~D-------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh---------~~~V~sVa 189 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED-------------GELQFFSIRKNSENTPEFYFESSIRLSDAGS---------KDWVTHIV 189 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTC---------CCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCccccccceeeeeeecccccc---------cccEEEEE
Confidence 6789999999999988653 368899988763 23332110000 01134689
Q ss_pred eecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce----Eec-cccccccceeecCCCceEEEeeeccCcc
Q 007140 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILH-KLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 249 wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~l~-~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
||||| |+-. .....+++|++ .+++.. .|. .....+..++|+ |..++.... +
T Consensus 190 wSPdg---Laas------------s~D~tVrlWd~---~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~---~- 245 (588)
T 2j04_A 190 WYEDV---LVAA------------LSNNSVFSMTV---SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCP---G- 245 (588)
T ss_dssp EETTE---EEEE------------ETTCCEEEECC---CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECS---S-
T ss_pred EcCCc---EEEE------------eCCCeEEEEEC---CCCccccceeeecccccCcEEEEEEE--CCEEEEEeC---C-
Confidence 99998 3222 12345667776 544422 242 233457789999 455554431 2
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeee--CCCCCEEEEE
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR--TSTGTNVIAK 370 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~--s~dgk~l~~~ 370 (616)
.|.++++.++ +...+.-.... .+. .+.+ +|||+.++..
T Consensus 246 -tIkLWd~~~~--~~~~~~~gh~~-~V~-----~va~~~s~d~~~La~a 285 (588)
T 2j04_A 246 -YVHKIDLKNY--SISSLKTGSLE-NFH-----IIPLNHEKESTILLMS 285 (588)
T ss_dssp -EEEEEETTTT--EEEEEECSCCS-CCC-----EEEETTCSSCEEEEEC
T ss_pred -eEEEEECCCC--eEEEEEcCCCc-eEE-----EEEeeeCCCCCEEEEE
Confidence 6777888762 22222212111 111 2788 9998765544
No 91
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=4.8e-06 Score=84.31 Aligned_cols=305 Identities=12% Similarity=0.107 Sum_probs=153.6
Q ss_pred eEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 007140 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (616)
Q Consensus 36 ~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~ 115 (616)
....|||+++ |+.+... ......|+++|.++++...-...... .. +.+||||++|++....
T Consensus 38 ~~~~pd~~~v-yV~~~~~----~~~~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~-------- 98 (386)
T 3sjl_D 38 EAPAPDARRV-YVNDPAH----FAAVTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTV-------- 98 (386)
T ss_dssp CCCCCCTTEE-EEEECGG----GCSSEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEE--------
T ss_pred eccCCCCCEE-EEEcCcc----cCCCCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEccc--------
Confidence 3457999984 5554310 01247999999998875433222211 33 8999999988775110
Q ss_pred cccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ec--CCC------CceeeeeECCC
Q 007140 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DF--GTP------AVYTAVEPSPD 185 (616)
Q Consensus 116 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l--~~~------~~~~~~~~SpD 185 (616)
...+. +. .....+.++|. ++++. .+ ..+ ..-..+.+|||
T Consensus 99 -----------~~r~~------------------~G--~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 99 -----------FSRIA------------------RG--ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp -----------EEETT------------------EE--EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred -----------ccccc------------------cC--CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC
Confidence 00000 00 01356888898 55532 33 221 12347899999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCcc-CCCCc-ceeecCCCceEEEEEe
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVR-EGMRS-ISWRADKPSTLYWVEA 262 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~~-~~wspdg~~~l~~~~~ 262 (616)
|+++++.... + ...+.++|+.++++ ..+. .+... ... .+.+. +..++||+ ++++..
T Consensus 148 Gk~lyVan~~-~----------~~~VsVID~~t~~vv~tI~-v~g~~-------~~~P~g~~~~~~~~~DG~--~~~v~~ 206 (386)
T 3sjl_D 148 GKTLLFYQFS-P----------APAVGVVDLEGKAFKRMLD-VPDCY-------HIFPTAPDTFFMHCRDGS--LAKVAF 206 (386)
T ss_dssp SSEEEEEECS-S----------SCEEEEEETTTTEEEEEEE-CCSEE-------EEEEEETTEEEEEETTSC--EEEEEC
T ss_pred CCEEEEEEcC-C----------CCeEEEEECCCCcEEEEEE-CCCcc-------eeecCCCceeEEECCCCC--EEEEEC
Confidence 9998887422 1 24789999987654 3332 11100 000 11111 35677876 444421
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeec-CCCceEEEeeeccCccEEEEEEeCCCCCCCceEE
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ws-pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (616)
...+.. +..... .|+ .........+.|. +||+.++ .+. .+ ++|.+|+.+. ..+.+
T Consensus 207 ~~~g~v---------~~~~~~-~~~-------~~~~~~~~~~~~~~~dG~~~~-vs~--~g--~V~v~d~~~~--~~~v~ 262 (386)
T 3sjl_D 207 GTEGTP---------EITHTE-VFH-------PEDEFLINHPAYSQKAGRLVW-PTY--TG--KIHQIDLSSG--DAKFL 262 (386)
T ss_dssp CSSSCC---------EEEECC-CCS-------CTTSCBCSCCEEETTTTEEEE-EBT--TS--EEEEEECTTS--SCEEC
T ss_pred CCCCeE---------EEeecc-eec-------cccccccccceeEcCCCcEEE-EeC--CC--EEEEEECCCC--cceee
Confidence 110100 000000 000 0111122345674 7886433 322 12 7999999763 33333
Q ss_pred eeccc-c-----cccCCCCCCCeeeCCCCCEEEEEeeecC-----CcccEEEEEecCCCCCCCcceeEeeecCCCceeee
Q 007140 342 FDRVF-E-----NVYSDPGSPMMTRTSTGTNVIAKIKKEN-----DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (616)
Q Consensus 342 ~~~~~-~-----~~~~~~g~~~~~~s~dgk~l~~~~~~~~-----~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (616)
-...+ . ....-.|...+..+++++++|+.....+ .++..++ .+|+++++..+-
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~----------------viD~~t~kv~~~ 326 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV----------------VLDAKTGERLAK 326 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEE----------------EEETTTCCEEEE
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEE----------------EEECCCCeEEEE
Confidence 11110 0 0000112234777888888888653211 1122333 589988875544
Q ss_pred eecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCcee
Q 007140 411 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (616)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~ 465 (616)
+... ..+.. ..+++|++.++|... .....|.++|+.+++..
T Consensus 327 i~vg-----~~~~~-------lavs~D~~~~ly~tn--~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 327 FEMG-----HEIDS-------INVSQDEKPLLYALS--TGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEE-----EEECE-------EEECSSSSCEEEEEE--TTTTEEEEEETTTCCEE
T ss_pred EECC-----CCcce-------EEECCCCCeEEEEEc--CCCCeEEEEECCCCcEE
Confidence 3221 11222 347889874545443 23578999999887743
No 92
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.80 E-value=4.7e-06 Score=86.20 Aligned_cols=205 Identities=10% Similarity=0.056 Sum_probs=119.7
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
.....|+|||++|+.... ...|.++++.+++...+....... +..+.|+||++.|+....
T Consensus 100 ~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s~------ 159 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTT----------EGDIKVLDSNFNLQREIDQAHVSE----ITKLKFFPSGEALISSSQ------ 159 (420)
T ss_dssp EEEEEECSSSCEEEEEET----------TSCEEEECTTSCEEEEETTSSSSC----EEEEEECTTSSEEEEEET------
T ss_pred eEEEEEecCCCEEEEEEC----------CCCEEEEeCCCcceeeecccccCc----cEEEEECCCCCEEEEEeC------
Confidence 445579999999887653 356788899888766653222222 678999999997766411
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-CeeecC-CCCceeeeeECCCCcEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFG-TPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~~~l~-~~~~~~~~~~SpDg~~i 189 (616)
...|.++|+ ++ ....+. ....+..++|+|||+.|
T Consensus 160 -------------------------------------------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 160 -------------------------------------------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp -------------------------------------------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred -------------------------------------------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence 135667777 45 344443 33456789999999998
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCcc---c---------cCccCCCCcceeecCCCce
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVC---Y---------NSVREGMRSISWRADKPST 256 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~---~---------~~~~~~~~~~~wspdg~~~ 256 (616)
+....+ ..+.+||+..++ ...+........ +.. + .........+.|+|+|+.
T Consensus 197 ~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~- 261 (420)
T 3vl1_A 197 LSASLD-------------GTIRLWECGTGTTIHTFNRKENPHD-GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY- 261 (420)
T ss_dssp EEEETT-------------SCEEEEETTTTEEEEEECBTTBTTC-CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-
T ss_pred EEEcCC-------------CcEEEeECCCCceeEEeecCCCCCC-CccEEEEecCCcceeeecccCcccceEEcCCCCE-
Confidence 877543 258899987554 333322100000 000 0 000011235788999863
Q ss_pred EEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eecc-ccccccceeecCCCc-eEEEeeeccCccEEEEEEeCCC
Q 007140 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHK-LDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~-~~~~~~~~~wspDg~-~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
| .... ....+.+|+. ..++.. .+.. .......+.|+|++. .|+... . ++ .|.++|+.+
T Consensus 262 l-~~~~-----------~dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~-~-dg--~i~vwd~~~ 322 (420)
T 3vl1_A 262 V-IAGH-----------VSGVITVHNV---FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY-E-NG--MLAQWDLRS 322 (420)
T ss_dssp E-EEEE-----------TTSCEEEEET---TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE-T-TS--EEEEEETTC
T ss_pred E-EEEc-----------CCCeEEEEEC---CCCceeEEcccccCCCceeEEEeCCCCCEEEEEe-C-CC--eEEEEEcCC
Confidence 3 2211 1234666676 433332 2322 234567899999988 555543 2 23 677788877
Q ss_pred C
Q 007140 334 K 334 (616)
Q Consensus 334 ~ 334 (616)
+
T Consensus 323 ~ 323 (420)
T 3vl1_A 323 P 323 (420)
T ss_dssp T
T ss_pred C
Confidence 4
No 93
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.80 E-value=6.7e-06 Score=81.30 Aligned_cols=224 Identities=13% Similarity=0.124 Sum_probs=124.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|||||++|+-... ...|.++++.+++........... +....|+|+++.|+....
T Consensus 15 ~V~~~~fsp~~~~l~s~~~----------dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~----- 75 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLY----------SGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSD----- 75 (304)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEET-----
T ss_pred ceEEEEECCCCCEEEEEcC----------CCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECC-----
Confidence 4889999999998876542 356777799888654332222222 567899999998776421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...|.++|+ +++ ...+. ....+..++|+|+++.
T Consensus 76 --------------------------------------------d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 76 --------------------------------------------DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp --------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred --------------------------------------------CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 134666677 554 33332 3345778999999998
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCc-eEE-EecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
|+..+.+ ..+.+||+..+ ... .+... ......+.|+|++...|+-.
T Consensus 112 l~sgs~D-------------~~v~lWd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~sg------ 159 (304)
T 2ynn_A 112 VLSGSDD-------------LTVKLWNWENNWALEQTFEGH-------------EHFVMCVAFNPKDPSTFASG------ 159 (304)
T ss_dssp EEEEETT-------------SCEEEEEGGGTTEEEEEECCC-------------CSCEEEEEECTTCTTEEEEE------
T ss_pred EEEECCC-------------CeEEEEECCCCcchhhhhccc-------------CCcEEEEEECCCCCCEEEEE------
Confidence 8876543 26888998754 332 22211 01123578898543323221
Q ss_pred CcccccCCCceeEeccCCCCCCCCc-eEecc-ccccccceeecC--CCceEEEeeeccCccEEEEEEeCCCCCCCceEEe
Q 007140 267 DANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~-~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (616)
.....+.+|+. ..+.. ..+.. .........|+| |+..|+.... ++ .|.+.|+.++ +....+
T Consensus 160 ------s~D~~v~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~--D~--~i~iWd~~~~--~~~~~~ 224 (304)
T 2ynn_A 160 ------CLDRTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD--DL--TIKIWDYQTK--SCVATL 224 (304)
T ss_dssp ------ETTSEEEEEET---TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET--TS--EEEEEETTTT--EEEEEE
T ss_pred ------eCCCeEEEEEC---CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC--CC--eEEEEeCCCC--ccceee
Confidence 12235666665 32222 22222 223345567765 5666665442 23 5666777763 211112
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 343 ~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
...... . ..+.|+|+++.|+...
T Consensus 225 ~~h~~~-v-----~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 225 EGHMSN-V-----SFAVFHPTLPIIISGS 247 (304)
T ss_dssp ECCSSC-E-----EEEEECSSSSEEEEEE
T ss_pred CCCCCC-E-----EEEEECCCCCEEEEEc
Confidence 211111 0 1278899998765443
No 94
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.80 E-value=2.7e-06 Score=93.25 Aligned_cols=216 Identities=9% Similarity=0.037 Sum_probs=119.2
Q ss_pred eeEEeecCCCCCCCC-ceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceE---ecccCC
Q 007140 6 GIGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK---PLFESP 81 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~-~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~---~lt~~~ 81 (616)
.+.|.++.+ ++ .+.++.... .+...+|||||++||--.. ...|.++|+.+++.. .+..+.
T Consensus 40 ~v~l~~~~~----~~~~~~~~~h~~--~v~~~~~spdg~~lasg~~----------d~~v~lWd~~~~~~~~~~~~~~~~ 103 (611)
T 1nr0_A 40 SVYTVPVGS----LTDTEIYTEHSH--QTTVAKTSPSGYYCASGDV----------HGNVRIWDTTQTTHILKTTIPVFS 103 (611)
T ss_dssp EEEEEETTC----SSCCEEECCCSS--CEEEEEECTTSSEEEEEET----------TSEEEEEESSSTTCCEEEEEECSS
T ss_pred EEEEecCCC----cccCeEecCCCC--ceEEEEECCCCcEEEEEeC----------CCCEEEeECCCCcceeeEeecccC
Confidence 456667653 33 333432222 4788999999999887653 256777798755422 221122
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEE
Q 007140 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (616)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (616)
. .+..+.|+|||+.|+...... + ....+++
T Consensus 104 ~-----~v~~v~fs~dg~~l~~~~~~~--------------------------------------~-------~~~~v~~ 133 (611)
T 1nr0_A 104 G-----PVKDISWDSESKRIAAVGEGR--------------------------------------E-------RFGHVFL 133 (611)
T ss_dssp S-----CEEEEEECTTSCEEEEEECCS--------------------------------------S-------CSEEEEE
T ss_pred C-----ceEEEEECCCCCEEEEEECCC--------------------------------------C-------ceeEEEE
Confidence 1 267899999999887752110 0 0124455
Q ss_pred EeCCCCeeecC-CCCceeeeeECCCCcE-EEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCcccc
Q 007140 162 GSLDGTAKDFG-TPAVYTAVEPSPDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYN 238 (616)
Q Consensus 162 ~d~~g~~~~l~-~~~~~~~~~~SpDg~~-i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 238 (616)
+|.......+. ....+..++|+||++. |+..+.+ ..+.+||....+. ..+...
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D-------------~~v~lwd~~~~~~~~~l~~H----------- 189 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD-------------NTVAIFEGPPFKFKSTFGEH----------- 189 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT-------------SCEEEEETTTBEEEEEECCC-----------
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCC-------------CeEEEEECCCCeEeeeeccc-----------
Confidence 55321222232 2335678999999985 4444332 2578888765433 333221
Q ss_pred CccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ec-------cccccccceeecCCC
Q 007140 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH-------KLDLRFRSVSWCDDS 310 (616)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~-------~~~~~~~~~~wspDg 310 (616)
......+.|+|||+. |+-. .....+.+|+. ..++... +. .....+..+.|+|||
T Consensus 190 --~~~V~~v~fspdg~~-las~------------s~D~~i~lwd~---~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 190 --TKFVHSVRYNPDGSL-FAST------------GGDGTIVLYNG---VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp --SSCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred --cCceEEEEECCCCCE-EEEE------------ECCCcEEEEEC---CCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 111345889999973 3221 11234566665 4344332 21 223456678999999
Q ss_pred ceEEEeeeccCccEEEEEEeCCC
Q 007140 311 LALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 311 ~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
..|+.... ++ .|.+.|+.+
T Consensus 252 ~~l~s~s~--D~--~v~lWd~~~ 270 (611)
T 1nr0_A 252 TKIASASA--DK--TIKIWNVAT 270 (611)
T ss_dssp SEEEEEET--TS--EEEEEETTT
T ss_pred CEEEEEeC--CC--eEEEEeCCC
Confidence 98776542 23 344455554
No 95
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.79 E-value=5.8e-06 Score=85.07 Aligned_cols=196 Identities=11% Similarity=0.078 Sum_probs=108.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEe-cccCCCcc-------------ccccccceEEecC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDIC-------------LNAVFGSFVWVNN 97 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~-------------~~~~~~~~~wspd 97 (616)
.+...+|||||++||... + ..+.++++.+|+... +....... -...+..+.|+||
T Consensus 66 ~V~~v~fspdg~~la~g~---------~--~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC---------N--KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp CCCEEEECTTSSEEEEEC---------B--SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred EEEEEEECCCCCEEEEEc---------C--CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 478899999999988743 2 245566887776433 22111000 0001447889999
Q ss_pred CcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CC
Q 007140 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TP 174 (616)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~ 174 (616)
|+.|+.... ...|.++|+ +++. ..+. ..
T Consensus 135 g~~l~s~~~-------------------------------------------------d~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGAE-------------------------------------------------DRLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEET-------------------------------------------------TSCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEcC-------------------------------------------------CCeEEEEECCCCcEEEEEccCC
Confidence 998776421 124556676 4433 2333 23
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeec-CC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DK 253 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-dg 253 (616)
..+..++|+|||+.|+....+ ..+.+||+.+++....... ..+...+.|+| |+
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~-------------~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSI-------------EDGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEEC-------------SSCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCC-------------CcEEEEECCCCeeEEEEEc-------------CCCcEEEEEECCCC
Confidence 356789999999998877543 3688999876654322111 01123477888 66
Q ss_pred CceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Ee-------ccccccccceeecCCCceEEEeeeccCccEE
Q 007140 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL-------HKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (616)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l-------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 325 (616)
+. |+.. . ....+.+|+. ..++.. .+ ......+..+.|+|||..|+.... ++ .
T Consensus 220 ~~-l~~~-s-----------~d~~v~iwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--d~--~ 279 (393)
T 1erj_A 220 KY-IAAG-S-----------LDRAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--DR--S 279 (393)
T ss_dssp CE-EEEE-E-----------TTSCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--TS--E
T ss_pred CE-EEEE-c-----------CCCcEEEEEC---CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC--CC--E
Confidence 62 3221 1 1234555565 333322 12 112334567899999988766542 23 4
Q ss_pred EEEEeCCC
Q 007140 326 TWLVCPGS 333 (616)
Q Consensus 326 l~~~d~~~ 333 (616)
|.++|+..
T Consensus 280 v~~wd~~~ 287 (393)
T 1erj_A 280 VKLWNLQN 287 (393)
T ss_dssp EEEEEC--
T ss_pred EEEEECCC
Confidence 55555544
No 96
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=98.79 E-value=5.6e-10 Score=112.84 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=79.3
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
...+.+++++.||.+|+++++.|.+.. + +.|+||++|+. ..... .+...+.|+++||+|+
T Consensus 66 ~~~~~~~~~~~dg~~i~~~~~~P~~~~--~--~~p~vv~~HG~--------------g~~~~--~~~~~~~l~~~G~~v~ 125 (337)
T 1vlq_A 66 VEAYDVTFSGYRGQRIKGWLLVPKLEE--E--KLPCVVQYIGY--------------NGGRG--FPHDWLFWPSMGYICF 125 (337)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECCSC--S--SEEEEEECCCT--------------TCCCC--CGGGGCHHHHTTCEEE
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCCC--C--CccEEEEEcCC--------------CCCCC--CchhhcchhhCCCEEE
Confidence 378899999999999999999998752 2 34899998431 11110 1134567899999999
Q ss_pred E-CCCCCccccCC-----CccC----Chh---------------HHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 560 A-GPSIPIIGEGD-----KLPN----DRF---------------VEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 560 ~-n~R~GS~GyG~-----~f~~----~~~---------------g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
. |+| |..+.+. +|+. ..| -...++|+.+++++|.+++.+|++||+|.+.
T Consensus 126 ~~d~r-G~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~ 199 (337)
T 1vlq_A 126 VMDTR-GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGG 199 (337)
T ss_dssp EECCT-TCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred EecCC-CCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 9 999 9764432 1110 001 1367899999999999999999999998763
No 97
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.78 E-value=3.3e-06 Score=84.99 Aligned_cols=263 Identities=10% Similarity=0.047 Sum_probs=136.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|||||+.|+-.+. ...|.++++.+++........... +..+.|+|+|+.|+....+..-.
T Consensus 57 ~v~~~~~s~d~~~l~s~s~----------Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQ----------DGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CEEEEEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEEEEEETTCEEE
T ss_pred ceEEEEECCCCCEEEEEeC----------CCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEEEEEeCCCeEE
Confidence 5788999999998776542 256778899887654332222212 56789999999887653321100
Q ss_pred CCCCcccCCC--C-eeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCC
Q 007140 112 PPKKTMVPLG--P-KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 112 ~~~~~~~~~g--~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpD 185 (616)
. ..+..+ . .......+- . ..+.. +....+...........+.++|+ +++ ...+. ....+..++|+||
T Consensus 123 i---w~~~~~~~~~~~~~~~~~h--~-~~v~~-~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 123 I---YNLKTREGNVRVSRELAGH--T-GYLSC-CRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp E---EETTTCSBSCEEEEEEECC--S-SCEEE-EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred E---EECccCCCcceeEEEecCC--C-ccEEE-EEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 0 000000 0 000000000 0 00000 00001111122223456788888 564 33343 2345678999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
++.|+....+ ..+.+||+..+ ....+... ......+.|+|+++. |+-. .
T Consensus 196 ~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~-l~s~-s-- 245 (340)
T 1got_B 196 TRLFVSGACD-------------ASAKLWDVREGMCRQTFTGH-------------ESDINAICFFPNGNA-FATG-S-- 245 (340)
T ss_dssp SSEEEEEETT-------------SCEEEEETTTCSEEEEECCC-------------SSCEEEEEECTTSSE-EEEE-E--
T ss_pred CCEEEEEeCC-------------CcEEEEECCCCeeEEEEcCC-------------cCCEEEEEEcCCCCE-EEEE-c--
Confidence 9988766543 36889998754 34443321 011235889999873 3221 1
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCceE-eccc--cccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEE
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (616)
....+.+|+. ..++... +... ...+..+.|+|||..|+.... ++ .|.++|+.+.+ ....+
T Consensus 246 ---------~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~--d~--~i~vwd~~~~~-~~~~~ 308 (340)
T 1got_B 246 ---------DDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD--DF--NCNVWDALKAD-RAGVL 308 (340)
T ss_dssp ---------TTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET--TS--EEEEEETTTCC-EEEEE
T ss_pred ---------CCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCEEEEECC--CC--eEEEEEcccCc-EeeEe
Confidence 1234566665 3322221 2111 124567899999998766542 23 57777776631 11222
Q ss_pred eec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 342 FDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 342 ~~~--~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
... .+.. +.|+|||+.|+...
T Consensus 309 ~~h~~~v~~---------~~~s~dg~~l~s~s 331 (340)
T 1got_B 309 AGHDNRVSC---------LGVTDDGMAVATGS 331 (340)
T ss_dssp ECCSSCEEE---------EEECTTSSCEEEEE
T ss_pred ecCCCcEEE---------EEEcCCCCEEEEEc
Confidence 211 1222 78999998776543
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.78 E-value=5.2e-06 Score=90.52 Aligned_cols=225 Identities=9% Similarity=0.045 Sum_probs=128.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC----ce-EecccCCCcccccc-ccceEEec--CCcEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EA-KPLFESPDICLNAV-FGSFVWVN--NSTLLIF 103 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g----~~-~~lt~~~~~~~~~~-~~~~~wsp--dg~~l~~ 103 (616)
.+..+.|||||++||+... ..|.+++++++ +. ..+..+.. . +..+.|+| |+++|+.
T Consensus 20 ~v~~~~~spdg~~l~~~~~-----------~~v~v~~~~~~~~~~~~~~~~~~h~~-----~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG-----------KSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp CCCCCEEETTTTEEEEEET-----------TEEEEEECCSSCCSSCSEEEECTTTT-----SCEEEEEECSSTTCCEEEE
T ss_pred ceeEEEECCCCCEEEEecC-----------CeEEEEECCCCCCccccceEEecCCC-----ceEEEEEECcCCCCCEEEE
Confidence 5789999999999999751 47888899877 43 34432222 2 56789999 9998877
Q ss_pred EecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC--------C-eeecC-
Q 007140 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--------T-AKDFG- 172 (616)
Q Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g--------~-~~~l~- 172 (616)
...+ ..|.++|+ ++ + ...+.
T Consensus 84 ~~~d-------------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 84 GDES-------------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp EETT-------------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred ecCC-------------------------------------------------CEEEEEeCCCCcccccccccccchhhc
Confidence 4211 12333333 22 1 11121
Q ss_pred CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 173 TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 173 ~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
....+..++|||||++|+........ ...+++|| .++....+... ......+.|+|+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d-~~~~~~~~~~~-------------~~~v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDN---------FGVFISWD-SGNSLGEVSGH-------------SQRINACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSC---------SEEEEETT-TCCEEEECCSC-------------SSCEEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCC---------ccEEEEEE-CCCcceeeecC-------------CccEEEEEECCC
Confidence 22356789999999999988654321 23577777 34444433321 011235889999
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eeccccc---cccceeecCC-CceEEEeeeccCccEEEE
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDL---RFRSVSWCDD-SLALVNETWYKTSQTRTW 327 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~---~~~~~~wspD-g~~l~~~~~~~~~~~~l~ 327 (616)
++..++.. .....+.+|+. ..++.. .+..... .+..+.|+|| +..|+.... ++ .|.
T Consensus 172 ~~~~l~~~------------~~d~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg--~i~ 232 (615)
T 1pgu_A 172 RPMRSMTV------------GDDGSVVFYQG---PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS--DR--KIS 232 (615)
T ss_dssp SSCEEEEE------------ETTTEEEEEET---TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET--TC--CEE
T ss_pred CCcEEEEE------------eCCCcEEEEeC---CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC--CC--eEE
Confidence 87433322 12345666676 333322 2333333 5678899999 887665442 13 577
Q ss_pred EEeCCCCCCCceEEe-ec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 328 LVCPGSKDVAPRVLF-DR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 328 ~~d~~~~~~~~~~l~-~~--~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
++|+.++ +....+ .. ...... ..+.|+ +++.++...
T Consensus 233 vwd~~~~--~~~~~~~~~~~~~~~~v-----~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 233 CFDGKSG--EFLKYIEDDQEPVQGGI-----FALSWL-DSQKFATVG 271 (615)
T ss_dssp EEETTTC--CEEEECCBTTBCCCSCE-----EEEEES-SSSEEEEEE
T ss_pred EEECCCC--CEeEEecccccccCCce-----EEEEEc-CCCEEEEEc
Confidence 7888763 222222 10 111111 127888 888776654
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.78 E-value=4.1e-06 Score=99.78 Aligned_cols=315 Identities=10% Similarity=0.039 Sum_probs=160.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|||+|+.++.... ...|.++++.+++........... +..+.|+|||+.|+....+..-.
T Consensus 842 ~v~~~~~sp~~~~l~~~~~----------dg~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s~s~dg~v~ 907 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALS----------QYCVELWNIDSRLKVADCRGHLSW----VHGVMFSPDGSSFLTASDDQTIR 907 (1249)
T ss_dssp CCCEEEECSSTTEEEEECS----------SSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEE
T ss_pred ceEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCceeeecCCCccc----eEEEEECCCCCEEEEEeCCCeEE
Confidence 5789999999998877542 356788899887654333222212 66899999999887754322100
Q ss_pred CCCCcccCCCCeeeecCccccch---hccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCCCceeeeeECCCCc
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIII---SRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQK 187 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~---~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~~~~~~~~~SpDg~ 187 (616)
.|.......... ...... ...+.............+..++. ++...... ...+..++|||+|+
T Consensus 908 -----------vw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~sp~g~ 974 (1249)
T 3sfz_A 908 -----------VWETKKVCKNSAIVLKQEIDV-VFQENETMVLAVDNIRGLQLIAGKTGQIDYLP-EAQVSCCCLSPHLE 974 (1249)
T ss_dssp -----------EEEHHHHHSCCSSSEEEEEEE-EEETTEEEEEEEESSSSEEEEEESSCCEEEEC-CSCEEEEEECTTSS
T ss_pred -----------EEEccccceeeeecccceeeE-EEcCCCcEEEEecCCcceEEEecCcceEEEcc-cCcEEEEEEcCCCC
Confidence 000000000000 000000 00000000000000111222222 22222222 22456889999999
Q ss_pred EEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
.+++.... ..+.+|++..++ ...+... ......+.|+|||+. |+..
T Consensus 975 ~l~~g~~~-------------g~i~i~d~~~~~~~~~~~~h-------------~~~v~~l~~s~dg~~-l~s~------ 1021 (1249)
T 3sfz_A 975 YVAFGDED-------------GAIKIIELPNNRVFSSGVGH-------------KKAVRHIQFTADGKT-LISS------ 1021 (1249)
T ss_dssp EEEEEETT-------------SCCEEEETTTTSCEEECCCC-------------SSCCCCEEECSSSSC-EEEE------
T ss_pred EEEEEcCC-------------CCEEEEEcCCCceeeecccC-------------CCceEEEEECCCCCE-EEEE------
Confidence 99988643 258889987553 3332211 112346899999984 3322
Q ss_pred CcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeeccc
Q 007140 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 346 (616)
.....+.+|+. .+++...+.........+.|+||+..+.... ++ .+.++|+.+++ ..+.+... .
T Consensus 1022 ------~~dg~i~vwd~---~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~---dg--~v~vwd~~~~~-~~~~~~~~-~ 1085 (1249)
T 3sfz_A 1022 ------SEDSVIQVWNW---QTGDYVFLQAHQETVKDFRLLQDSRLLSWSF---DG--TVKVWNVITGR-IERDFTCH-Q 1085 (1249)
T ss_dssp ------CSSSBEEEEET---TTTEEECCBCCSSCEEEEEECSSSEEEEEES---SS--EEEEEETTTTC-CCEEEECC-S
T ss_pred ------cCCCEEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEEEEC---CC--cEEEEECCCCc-eeEEEccc-C
Confidence 12345666776 5444444444455667789999887554432 12 57778887742 22323211 1
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEee
Q 007140 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (616)
Q Consensus 347 ~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (616)
. .. ..++|+|||+.++.... + ....+ +|+.+++........ ...+..
T Consensus 1086 ~-~v-----~~~~~s~d~~~l~s~s~-d--~~v~i------------------wd~~~~~~~~~l~~h----~~~v~~-- 1132 (1249)
T 3sfz_A 1086 G-TV-----LSCAISSDATKFSSTSA-D--KTAKI------------------WSFDLLSPLHELKGH----NGCVRC-- 1132 (1249)
T ss_dssp S-CC-----CCEEECSSSSSCEEECC-S--SCCCE------------------ECSSSSSCSBCCCCC----SSCEEE--
T ss_pred C-cE-----EEEEECCCCCEEEEEcC-C--CcEEE------------------EECCCcceeeeeccC----CCcEEE--
Confidence 1 11 23899999998765542 1 12333 355555433222211 111222
Q ss_pred cCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCce
Q 007140 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (616)
Q Consensus 427 ~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~ 464 (616)
..|++++..++.... . ..|.+.++.+++.
T Consensus 1133 -----~~~s~dg~~lat~~~-d---g~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1133 -----SAFSLDGILLATGDD-N---GEIRIWNVSDGQL 1161 (1249)
T ss_dssp -----EEECSSSSEEEEEET-T---SCCCEEESSSSCC
T ss_pred -----EEECCCCCEEEEEeC-C---CEEEEEECCCCce
Confidence 357888886654332 2 3477788777653
No 100
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.78 E-value=1.1e-06 Score=89.28 Aligned_cols=225 Identities=14% Similarity=0.064 Sum_probs=125.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc---eEecccCCCccccccccceEEecCCcEEEEEecCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~---~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~ 108 (616)
.+..+.|||||+.|+.... ...|.++++.+++ ...+..+.. .+..+.|+|+++.|+....
T Consensus 10 ~i~~~~~s~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~-- 72 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN----------NHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCGT-- 72 (372)
T ss_dssp CCCEEEECTTSSEEEEECS----------SSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEET--
T ss_pred CeEEEEECCCCCEEEEEeC----------CCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEcC--
Confidence 5889999999998887642 3578888888875 233322222 2668999999998877421
Q ss_pred CCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee---ec-CCCCceeeeeEC
Q 007140 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DF-GTPAVYTAVEPS 183 (616)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~---~l-~~~~~~~~~~~S 183 (616)
...|.++|+ +++.. .+ .....+..++|+
T Consensus 73 -----------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 73 -----------------------------------------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp -----------------------------------------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred -----------------------------------------------CCeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 123445555 34321 11 223356789999
Q ss_pred CCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce----EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEE
Q 007140 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (616)
Q Consensus 184 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~ 259 (616)
||++.|+....+ ..+.+||+..+. ...+.. +. ......+.|+|+++. |+.
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~-~~-----------~~~i~~~~~~~~~~~-l~~ 159 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKK-PI-----------RSTVLSLDWHPNSVL-LAA 159 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECT-TC-----------CSCEEEEEECTTSSE-EEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeec-cc-----------CCCeeEEEEcCCCCE-EEE
Confidence 999999888643 257777776443 122211 00 011235889999873 322
Q ss_pred EEeecCCCcccccCCCceeEeccCCC---------------CCCCCce-EeccccccccceeecCCCceEEEeeeccCcc
Q 007140 260 VEAQDRGDANVEVSPRDIIYTQPAEP---------------AEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~~~~~---------------~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
. .. ...+.+|+... ...++.. .+.........+.|+||+..|+.... ++
T Consensus 160 ~-~~-----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~- 224 (372)
T 1k8k_C 160 G-SC-----------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH--DS- 224 (372)
T ss_dssp E-ET-----------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET--TT-
T ss_pred E-cC-----------CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC--CC-
Confidence 1 11 12344444200 0112222 23233445678899999987666542 23
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
.|.++|+.++ +....+...... . ..+.|+++|+.++..
T Consensus 225 -~i~i~d~~~~--~~~~~~~~~~~~-v-----~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 225 -TVCLADADKK--MAVATLASETLP-L-----LAVTFITESSLVAAG 262 (372)
T ss_dssp -EEEEEEGGGT--TEEEEEECSSCC-E-----EEEEEEETTEEEEEE
T ss_pred -EEEEEECCCC--ceeEEEccCCCC-e-----EEEEEecCCCEEEEE
Confidence 5777788763 222222211100 0 127899998865543
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.78 E-value=7.7e-08 Score=98.32 Aligned_cols=230 Identities=13% Similarity=0.060 Sum_probs=116.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|||||++||.... ...|.++++.++..+.+...... ...+..+.|+||++.|+....+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d---- 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA----------TNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQD---- 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCS----------SSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETT----
T ss_pred cEEEEEECCCCCEEEEecC----------CCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCC----
Confidence 5889999999998876532 24566667777632333222110 1125688999999987764211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC----eeecC-CCCceeeeeECCC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~----~~~l~-~~~~~~~~~~SpD 185 (616)
..|.++|+ +++ ...+. ....+..++|+||
T Consensus 77 ---------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 77 ---------------------------------------------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp ---------------------------------------------SSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred ---------------------------------------------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 12444444 222 22222 2335678999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCce----EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEE
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~ 261 (616)
|+.|+....+ ..+.+||+..++ .+.+.. + .......+.|+||++. |+..
T Consensus 112 ~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~-~-----------h~~~v~~~~~~~~~~~-l~~~- 164 (377)
T 3dwl_C 112 EDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKR-P-----------LRSTILSLDWHPNNVL-LAAG- 164 (377)
T ss_dssp SSCCEEEESS-------------SCEEECCC-----CCCCEEECS-S-----------CCSCEEEEEECTTSSE-EEEE-
T ss_pred CCEEEEEecC-------------CeEEEEEECCcccceeeeEeec-c-----------cCCCeEEEEEcCCCCE-EEEE-
Confidence 9998887643 258888887654 233322 0 0111245889999873 3322
Q ss_pred eecCCCcccccCCCceeEeccCC-----------CCC----CCCceEeccccccccceeecCCCceEEEeeeccCccEEE
Q 007140 262 AQDRGDANVEVSPRDIIYTQPAE-----------PAE----GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRT 326 (616)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~~~~-----------~~~----~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l 326 (616)
..| ..+.+|+.. ++. .++..........+..+.|+||+..|+.... ++ .|
T Consensus 165 ~~d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--d~--~i 229 (377)
T 3dwl_C 165 CAD-----------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH--DS--SV 229 (377)
T ss_dssp ESS-----------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET--TT--EE
T ss_pred eCC-----------CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC--CC--cE
Confidence 111 223333430 000 0011111123344667899999997776542 23 45
Q ss_pred EEEeCCCCCCCceEE--eecccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 327 WLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 327 ~~~d~~~~~~~~~~l--~~~~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
.++|+.++...++.+ +..... .. ..+.|+|+|+.|+..
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~-~v-----~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQL-PL-----RSLLWANESAIVAAG 269 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSSS-CE-----EEEEEEETTEEEEEE
T ss_pred EEEECCCCCCcceeeEeecCCCC-ce-----EEEEEcCCCCEEEEE
Confidence 566666532111112 111100 00 128899999876544
No 102
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.77 E-value=1.3e-05 Score=81.26 Aligned_cols=225 Identities=10% Similarity=0.082 Sum_probs=123.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|||||++|+-.+. ...|.+|+..+++........... +..+.|+|+|+.|+....+
T Consensus 66 ~V~~~~~s~d~~~l~s~s~----------Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQ----------DGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEEEEESTT----
T ss_pred eEEEEEECCCCCEEEEEeC----------CCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEEEEeeCC----
Confidence 4889999999998776542 356777798877654332222212 5688999999988764211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC-C-------Ceeec-CCCCceeeeeE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G-------TAKDF-GTPAVYTAVEP 182 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~-g-------~~~~l-~~~~~~~~~~~ 182 (616)
..+.++++. . ....+ .....+..+.|
T Consensus 128 ---------------------------------------------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 128 ---------------------------------------------NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ---------------------------------------------SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred ---------------------------------------------CCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 111222220 0 01111 12234668999
Q ss_pred CCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecC--CCceEEE
Q 007140 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRAD--KPSTLYW 259 (616)
Q Consensus 183 SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd--g~~~l~~ 259 (616)
+|+++.|+..+.+ ..+.+||+..++ ...+.... .....+.|+|+ |. +++
T Consensus 163 ~~~~~~l~t~s~D-------------~~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~g~--~l~ 214 (354)
T 2pbi_B 163 TNSDMQILTASGD-------------GTCALWDVESGQLLQSFHGHG-------------ADVLCLDLAPSETGN--TFV 214 (354)
T ss_dssp CSSSSEEEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECCCSSCC--EEE
T ss_pred eCCCCEEEEEeCC-------------CcEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEeCCCCC--EEE
Confidence 9999998877543 368899987553 34433210 01123456554 44 222
Q ss_pred EEeecCCCcccccCCCceeEeccCCCCCCCCceE-eccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCc
Q 007140 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (616)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (616)
... ....+.+|+. ..++... +......+..+.|+|++..|+.... ++ .+.++|+... ..
T Consensus 215 sgs-----------~Dg~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--D~--~v~lwd~~~~--~~ 274 (354)
T 2pbi_B 215 SGG-----------CDKKAMVWDM---RSGQCVQAFETHESDVNSVRYYPSGDAFASGSD--DA--TCRLYDLRAD--RE 274 (354)
T ss_dssp EEE-----------TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TS--CEEEEETTTT--EE
T ss_pred EEe-----------CCCeEEEEEC---CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC--CC--eEEEEECCCC--cE
Confidence 211 2235666776 4444433 3334455678999999987766542 23 3555677652 22
Q ss_pred eEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 339 ~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
..++..... . .+...+.|+++|+.++...
T Consensus 275 ~~~~~~~~~-~---~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 275 VAIYSKESI-I---FGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEEECCTTC-C---SCEEEEEECTTSSEEEEEE
T ss_pred EEEEcCCCc-c---cceeEEEEeCCCCEEEEEE
Confidence 222211100 0 0111378999999876654
No 103
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.7e-06 Score=89.44 Aligned_cols=231 Identities=12% Similarity=0.125 Sum_probs=121.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCC----C-ceEecccCCCccccccccceEEecC-CcEEEEEe
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----G-EAKPLFESPDICLNAVFGSFVWVNN-STLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~----g-~~~~lt~~~~~~~~~~~~~~~wspd-g~~l~~~~ 105 (616)
.+..+.|||||+.|+.... ...|.++++.+ . ....+..+.. .+..+.|+|+ ++.|+...
T Consensus 69 ~v~~~~~s~~~~~l~~~~~----------dg~v~vw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~~ 133 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALD----------NGSLELYSTNEANNAINSMARFSNHSS-----SVKTVKFNAKQDNVLASGG 133 (416)
T ss_dssp CEEEEEECSSSSCEEEEES----------SSCEEEECCSSTTSCCCEEEECCCSSS-----CCCEEEECSSSTTBEEEEC
T ss_pred ceEEEEECCCCCeEEEEcc----------CCeEEEeecccccccccchhhccCCcc-----ceEEEEEcCCCCCEEEEEc
Confidence 5889999999999887653 24566778776 2 2333332222 2678999998 66655531
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-------eeec----CC
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-------AKDF----GT 173 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-------~~~l----~~ 173 (616)
.+ ..|.++|+ +++ ...+ ..
T Consensus 134 ~d-------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 134 NN-------------------------------------------------GEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SS-------------------------------------------------SCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred CC-------------------------------------------------CeEEEEECCCCccccccccccccccccCC
Confidence 11 12333344 221 1111 11
Q ss_pred CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecC
Q 007140 174 PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (616)
Q Consensus 174 ~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (616)
...+..++|+|++..++++.... ..|.+||+..++. ..+....... +.......+.|+|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSS------------NFASIWDLKAKKEVIHLSYTSPNS-------GIKQQLSVVEWHPK 225 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSS------------SCEEEEETTTTEEEEEECCCCCSS-------CCCCCEEEEEECSS
T ss_pred CCCeeEEEeCCCCCcEEEEEcCC------------CCEEEEECCCCCcceEEecccccc-------ccCCceEEEEECCC
Confidence 23456899999954444443322 3689999986543 3332210000 00011235889999
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCC-Cce-Eec-cccccccceeecC-CCceEEEeeeccCccEEEEE
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPE-ILH-KLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWL 328 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g-~~~-~l~-~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~~ 328 (616)
+...|+.. ..++. ...+.+|+. ..+ ... .+. .....+..+.|+| |+..|+.... ++ .|.+
T Consensus 226 ~~~~l~~~-~~d~~--------~~~i~~~d~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~--dg--~v~~ 289 (416)
T 2pm9_A 226 NSTRVATA-TGSDN--------DPSILIWDL---RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR--DN--TVLL 289 (416)
T ss_dssp CTTEEEEE-ECCSS--------SCCCCEEET---TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES--SS--EEEE
T ss_pred CCCEEEEE-ECCCC--------CceEEEEeC---CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC--CC--CEEE
Confidence 86533332 21110 014555565 322 222 233 3445567899999 7877665542 23 5777
Q ss_pred EeCCCCCCCceEEeecccccccCCCCCCCeeeCCCC-CEEEE
Q 007140 329 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG-TNVIA 369 (616)
Q Consensus 329 ~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dg-k~l~~ 369 (616)
+|+.++ +....+..... .. ..++|+|+| +.++.
T Consensus 290 wd~~~~--~~~~~~~~~~~-~v-----~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 290 WNPESA--EQLSQFPARGN-WC-----FKTKFAPEAPDLFAC 323 (416)
T ss_dssp ECSSSC--CEEEEEECSSS-CC-----CCEEECTTCTTEEEE
T ss_pred eeCCCC--ccceeecCCCC-ce-----EEEEECCCCCCEEEE
Confidence 888763 22222221111 11 238999999 55443
No 104
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=98.76 E-value=8e-09 Score=112.91 Aligned_cols=115 Identities=14% Similarity=0.112 Sum_probs=81.0
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCccc-CCCCccCCC--CCchH-HHHhhCC
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGM--TPTSS-LIFLARR 555 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~-q~la~~G 555 (616)
+..+.+.++.+||.+|++++++|.+. +++ |+||+.+|- +... ..++....+ .+... ++||++|
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~---~~~--P~vl~~hgy--------g~~~~~~~~~~~~~~~~~~~~~~~la~~G 89 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA---KNA--PIVLTRTPY--------DASGRTERLASPHMKDLLSAGDDVFVEGG 89 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC---CSE--EEEEEEESS--------CHHHHTCSSCCSSHHHHSCGGGHHHHHTT
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC---CCe--eEEEEEcCC--------CCccccccccccccccccchhHHHHHhCC
Confidence 36677899999999999999999874 234 777765320 0000 001110000 01122 8999999
Q ss_pred eEEEE-CCCCCccccCCCccC-----ChhHH---HHHHHHHHHHHHHHHc-CCccCCceEEEee
Q 007140 556 FAVLA-GPSIPIIGEGDKLPN-----DRFVE---QLVSSAEAAVEEVVRR-GVGLPILYLNTTA 609 (616)
Q Consensus 556 y~Vl~-n~R~GS~GyG~~f~~-----~~~g~---~~~~D~~~~v~~l~~~-~~vD~~ri~~~~~ 609 (616)
|+|+. |+| |+.+.+..|.. ++|+. .+++|+.++++||.++ ++.| .|||+.+.
T Consensus 90 y~Vv~~D~R-G~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~ 151 (615)
T 1mpx_A 90 YIRVFQDVR-GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGS 151 (615)
T ss_dssp CEEEEEECT-TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEE
T ss_pred eEEEEECCC-CCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEec
Confidence 99999 999 99888877653 12443 7899999999999999 8988 49999874
No 105
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.75 E-value=2.5e-05 Score=79.67 Aligned_cols=123 Identities=14% Similarity=0.120 Sum_probs=69.4
Q ss_pred EEccCCCeEEEEEeeccccccCCCce-eEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 007140 37 SWSPDGKRIAFSVRVDEEDNVSSCKL-RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (616)
Q Consensus 37 ~~SPDG~~iaf~~~~~~~~~~~~~~~-~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~ 115 (616)
..+||+++ +|+.+... .... .|+++|.++++..... +.+. ...+.+||||++|++.......
T Consensus 27 ~~~~~~~~-~yv~~~~~-----~~~~~~v~v~D~~t~~~~~~i--~~g~----~p~i~~spDg~~lyv~n~~~~~----- 89 (373)
T 2mad_H 27 APGADGRR-SYINLPAH-----HSAIIQQWVLDAGSGSILGHV--NGGF----LPNPVAAHSGSEFALASTSFSR----- 89 (373)
T ss_pred cCCCCCCE-EEEeCCcc-----cCCccEEEEEECCCCeEEEEe--cCCC----CCCeEECCCCCEEEEEeccccc-----
Confidence 44588965 77765300 1111 8899999988754322 2211 1288999999998885210000
Q ss_pred cccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ecCCC--------CceeeeeECCC
Q 007140 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP--------AVYTAVEPSPD 185 (616)
Q Consensus 116 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~--------~~~~~~~~SpD 185 (616)
...|. ....+.++|+ +.++. .+..+ ..-..+.||||
T Consensus 90 -----------~~rg~-----------------------~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 90 -----------IAKGK-----------------------RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred -----------cccCC-----------------------CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC
Confidence 00000 1245667777 44322 22111 12237899999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR 222 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 222 (616)
|++|++..... ...|.++| ++++..
T Consensus 136 G~~l~v~n~~~-----------~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 136 NADLLFFQFAA-----------GPAVGLVV-QGGSSD 160 (373)
T ss_pred CCEEEEEecCC-----------CCeEEEEE-CCCCEE
Confidence 99999885321 23689999 866543
No 106
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.75 E-value=9.5e-06 Score=84.04 Aligned_cols=223 Identities=10% Similarity=0.071 Sum_probs=125.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|+|+.|+-.+. ...|.+||+.+++........... +..+.|+|+|+.|+....+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~----------Dg~i~vwd~~~~~~~~~l~~h~~~----V~~v~~~~~~~~l~sgs~D---- 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASE----------DATIKVWDYETGDFERTLKGHTDS----VQDISFDHSGKLLASCSAD---- 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEES----------SSCEEEEETTTCCCCEEECCCSSC----EEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCcEEEEEeccCCc----EEEEEEcCCCCEEEEEeCC----
Confidence 4678899999998766542 256778899888754332222212 6688999999977664211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~~~~~~~~~SpDg~~ 188 (616)
..|.++|+ +++. ..+. ....+..++|+|+|+.
T Consensus 172 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 172 ---------------------------------------------MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ---------------------------------------------SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 12334455 2332 2232 2235678999999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
|+..+.+ ..+.+||+..+ ..+.+.... .....+.++|||.. | ....
T Consensus 207 l~s~s~D-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~-l-~s~s----- 253 (410)
T 1vyh_C 207 IVSASRD-------------KTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTL-I-ASCS----- 253 (410)
T ss_dssp EEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSE-E-EEEE-----
T ss_pred EEEEeCC-------------CeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCE-E-EEEc-----
Confidence 8877543 36889998754 444443210 11234778888872 2 2211
Q ss_pred cccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCC--------------------CceEEEeeeccCccEEE
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDD--------------------SLALVNETWYKTSQTRT 326 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspD--------------------g~~l~~~~~~~~~~~~l 326 (616)
....+.+|+. ..++.. .+......+..+.|+|+ |..|+... . ++ .|
T Consensus 254 ------~D~~v~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-~-D~--~i 320 (410)
T 1vyh_C 254 ------NDQTVRVWVV---ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-R-DK--TI 320 (410)
T ss_dssp ------TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-T-TS--EE
T ss_pred ------CCCeEEEEEC---CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-C-CC--eE
Confidence 1234555665 433333 23334445667788886 33444433 1 23 57
Q ss_pred EEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.++|+.++ .....+..... .. ..+.|+++|++|+...
T Consensus 321 ~iwd~~~~--~~~~~~~~h~~-~v-----~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 321 KMWDVSTG--MCLMTLVGHDN-WV-----RGVLFHSGGKFILSCA 357 (410)
T ss_dssp EEEETTTT--EEEEEEECCSS-CE-----EEEEECSSSSCEEEEE
T ss_pred EEEECCCC--ceEEEEECCCC-cE-----EEEEEcCCCCEEEEEe
Confidence 77788763 21111111110 00 1278999999876544
No 107
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=98.75 E-value=2.6e-08 Score=102.76 Aligned_cols=121 Identities=8% Similarity=0.017 Sum_probs=82.6
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCC-------CccCCCCCchHHHHh
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-------NEFSGMTPTSSLIFL 552 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~la 552 (616)
...+.+++++.||.+|+|+|++|.+.. .|.|+||+.++... +.....+.. ..|......+.+.||
T Consensus 85 ~~~e~v~~~~~~g~~l~~~l~~P~~~~----~~~P~Vl~~HG~g~----~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la 156 (391)
T 3g8y_A 85 YILEKWEFYPFPKSVSTFLVLKPEHLK----GAVPGVLCIPGSGR----TKEGLVGEPGICDKLTEDYNNPKVSMALNMV 156 (391)
T ss_dssp EEEEEEEECCSTTCCEEEEEEEETTCC----SCEEEEEEECCTTC----CHHHHTTCCCSSGGGCCCTTSTTTCHHHHHH
T ss_pred EEEEEEEEEcCCCCEEEEEEEeCCCCC----CCCCEEEEeCCCCC----CchhhccccccccccchhhcchHHHHHHHHH
Confidence 467889999999999999999998752 24588888854210 000000000 011100114578999
Q ss_pred hCCeEEEE-CCCCCccccCCC--------cc-----------CChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 553 ARRFAVLA-GPSIPIIGEGDK--------LP-----------NDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 553 ~~Gy~Vl~-n~R~GS~GyG~~--------f~-----------~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
++||+|+. |+| |....+.. +. ...+++....|++.++++|.+++.+|++||+|++.
T Consensus 157 ~~G~~Vl~~D~r-g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~ 232 (391)
T 3g8y_A 157 KEGYVAVAVDNA-AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGF 232 (391)
T ss_dssp TTTCEEEECCCT-TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEE
T ss_pred HCCCEEEEecCC-CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEE
Confidence 99999999 999 87665533 11 12344566799999999999999999999999874
No 108
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.75 E-value=2.6e-05 Score=78.45 Aligned_cols=162 Identities=12% Similarity=0.078 Sum_probs=86.6
Q ss_pred eEEEEeC-CCC-eeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCC
Q 007140 158 QLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (616)
Q Consensus 158 ~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (616)
.+.++|+ +++ ...+. ....+..++|||||+.|+....+ ..+.+||+.++....+......
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~~~~---- 161 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE-------------REIKLWNILGECKFSSAEKENH---- 161 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT-------------SCEEEEESSSCEEEECCTTTSC----
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC-------------CEEEEEeccCCceeeeecccCC----
Confidence 4556677 454 33332 33456789999999998877543 3688999876554433221100
Q ss_pred ccccCccCCCCcceeecCCCc--------eEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceee
Q 007140 235 VCYNSVREGMRSISWRADKPS--------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW 306 (616)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~--------~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~w 306 (616)
......+.|+|+++. .++.. . .....+.+|+. .......+......+..+.|
T Consensus 162 ------~~~v~~~~~~~~~~~~~~~~~~~~~l~s-~----------~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 162 ------SDWVSCVRYSPIMKSANKVQPFAPYFAS-V----------GWDGRLKVWNT---NFQIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp ------SSCEEEEEECCCCCSCSCCCSSCCEEEE-E----------ETTSEEEEEET---TTEEEEEEECCSSCEEEEEE
T ss_pred ------CceeeeeeeccccccccccCCCCCEEEE-E----------cCCCEEEEEcC---CCceeEEEcCccccceEEEE
Confidence 001224677777631 01111 1 12235556664 32122223334455677899
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEe--ecccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~--~~~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
+|||..|+.... ++ .|.++|+... ..+...+ ...+.. ++|+|+++.+...
T Consensus 222 s~~g~~l~sgs~--dg--~v~iwd~~~~-~~~~~~~~~~~~v~~---------v~~sp~~~~la~~ 273 (343)
T 2xzm_R 222 SPNGKYIATGGK--DK--KLLIWDILNL-TYPQREFDAGSTINQ---------IAFNPKLQWVAVG 273 (343)
T ss_dssp CTTSSEEEEEET--TC--EEEEEESSCC-SSCSEEEECSSCEEE---------EEECSSSCEEEEE
T ss_pred CCCCCEEEEEcC--CC--eEEEEECCCC-cccceeecCCCcEEE---------EEECCCCCEEEEE
Confidence 999998776542 23 4666676332 1222222 112222 8899999876543
No 109
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.75 E-value=2.8e-06 Score=88.83 Aligned_cols=231 Identities=9% Similarity=0.084 Sum_probs=121.7
Q ss_pred cccceEEccC-CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccC-CCccccccccceEEec-CCcEEEEEecCC
Q 007140 32 KINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES-PDICLNAVFGSFVWVN-NSTLLIFTIPSS 108 (616)
Q Consensus 32 ~~~~~~~SPD-G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~-~~~~~~~~~~~~~wsp-dg~~l~~~~~~~ 108 (616)
.+..++|+|+ ++.||. ... ...|.+||+.+++...+... .. ...+..+.|+| |++.|+....
T Consensus 121 ~V~~l~~~P~~~~~las-Gs~---------dg~i~lWd~~~~~~~~~~~~~gH---~~~V~~l~f~p~~~~~l~s~s~-- 185 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAV-GSK---------GGDIMLWNFGIKDKPTFIKGIGA---GGSITGLKFNPLNTNQFYASSM-- 185 (435)
T ss_dssp CEEEEEECSSCTTCEEE-EET---------TSCEEEECSSCCSCCEEECCCSS---SCCCCEEEECSSCTTEEEEECS--
T ss_pred CEEEEEEeCCCCCEEEE-EeC---------CCEEEEEECCCCCceeEEEccCC---CCCEEEEEEeCCCCCEEEEEeC--
Confidence 4788999995 555554 322 35677789887754333221 11 11267899998 6776655311
Q ss_pred CCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCCC----CceeeeeEC
Q 007140 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPS 183 (616)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~----~~~~~~~~S 183 (616)
...|.++|+.+ ..+.+... ..+..++|+
T Consensus 186 -----------------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (435)
T 4e54_B 186 -----------------------------------------------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVS 218 (435)
T ss_dssp -----------------------------------------------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEE
T ss_pred -----------------------------------------------CCEEEEeeccCCceeEEeccCCCCccEEEEEEC
Confidence 12344556644 23322211 134578999
Q ss_pred CCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEee
Q 007140 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (616)
Q Consensus 184 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (616)
|||+.|+..... ..|.+||+.+++...+... ......+.|+|+++..| .....
T Consensus 219 ~~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~~-~s~s~ 271 (435)
T 4e54_B 219 ASSRMVVTGDNV-------------GNVILLNMDGKELWNLRMH-------------KKKVTHVALNPCCDWFL-ATASV 271 (435)
T ss_dssp TTTTEEEEECSS-------------SBEEEEESSSCBCCCSBCC-------------SSCEEEEEECTTCSSEE-EEEET
T ss_pred CCCCEEEEEeCC-------------CcEeeeccCcceeEEEecc-------------cceEEeeeecCCCceEE-EEecC
Confidence 999998877532 3688999987654433221 11123588999987533 22111
Q ss_pred cCCCcccccCCCceeEeccCCCCCCCCc-eEe---ccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCce
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP-EIL---HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l---~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (616)
...+.+|++ ..++. ..+ ......+..+.|+|||..|+.... ++ .|.++|+.+.+ .+.
T Consensus 272 -----------d~~v~iwd~---~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~--D~--~i~iwd~~~~~-~~~ 332 (435)
T 4e54_B 272 -----------DQTVKIWDL---RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ--KS--EIRVYSASQWD-CPL 332 (435)
T ss_dssp -----------TSBCCEEET---TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES--SS--CEEEEESSSSS-SEE
T ss_pred -----------cceeeEEec---ccccccceEEEeeeccccccceeECCCCCeeEEEcC--CC--EEEEEECCCCc-cce
Confidence 123444454 22111 111 122334567889999998776542 23 46666776632 222
Q ss_pred EEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 340 ~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.+...... ...........|++++..+++..
T Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 333 GLIPHPHR-HFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp EECCCCCC-CCSSSCCCBCEECSSSSCEEEEC
T ss_pred EEeccccc-ccccceeEEEEEcCCCCEEEEEE
Confidence 22211110 00000111256788887766554
No 110
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.74 E-value=5.1e-07 Score=91.81 Aligned_cols=226 Identities=8% Similarity=0.065 Sum_probs=116.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+...+||||++.|+ .+ . + ..|.++|+.+++...+.......-...+..+.|+|||+.|+....
T Consensus 96 ~V~~~~~s~d~~~l~-~s-~-------d--g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~----- 159 (357)
T 4g56_B 96 GVTDVAWVSEKGILV-AS-D-------S--GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK----- 159 (357)
T ss_dssp CEEEEEEETTTEEEE-EE-T-------T--SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-----
T ss_pred CEEEEEEcCCCCEEE-EE-C-------C--CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-----
Confidence 477899999997543 22 1 2 357777888776443321100000112568899999998776421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecCC-CCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT-PAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~-~~~~~~~~~SpDg~~ 188 (616)
...|.++|+ +++. ..+.. ...+..++|+|+++.
T Consensus 160 --------------------------------------------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 160 --------------------------------------------DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp --------------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred --------------------------------------------CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 124556666 4432 33332 235678999999876
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
++++.... ..|.+||+..++. ..+.... . ......+.|+|++...|+ ...
T Consensus 196 ~~~s~~~d------------g~v~~wd~~~~~~~~~~~~~~-~----------~~~v~~v~~sp~~~~~la-~g~----- 246 (357)
T 4g56_B 196 IFLSCGED------------GRILLWDTRKPKPATRIDFCA-S----------DTIPTSVTWHPEKDDTFA-CGD----- 246 (357)
T ss_dssp CEEEEETT------------SCEEECCTTSSSCBCBCCCTT-C----------CSCEEEEEECTTSTTEEE-EEE-----
T ss_pred eeeeeccC------------CceEEEECCCCceeeeeeecc-c----------cccccchhhhhcccceEE-Eee-----
Confidence 55554332 2588889875432 2221100 0 011235789998765332 211
Q ss_pred cccccCCCceeEeccCCCCCCCCc-eEeccccccccceeecCCCce-EEEeeeccCccEEEEEEeCCCCCCCceEEee--
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFD-- 343 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~-- 343 (616)
....+.+|+. ..++. ..+......+..+.|+||+.. |+... . ++ .|.++|+.++ +...+..
T Consensus 247 ------~d~~i~~wd~---~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs-~-D~--~i~iwd~~~~--~~~~~~~H~ 311 (357)
T 4g56_B 247 ------ETGNVSLVNI---KNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS-E-DC--TVAVLDADFS--EVFRDLSHR 311 (357)
T ss_dssp ------SSSCEEEEES---SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE-T-TS--CEEEECTTSC--EEEEECCCS
T ss_pred ------cccceeEEEC---CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe-C-CC--EEEEEECCCC--cEeEECCCC
Confidence 1234566665 43333 234334455678899999864 54433 2 23 4666788763 2222221
Q ss_pred cccccccCCCCCCCeeeCC-CCCEEEEE
Q 007140 344 RVFENVYSDPGSPMMTRTS-TGTNVIAK 370 (616)
Q Consensus 344 ~~~~~~~~~~g~~~~~~s~-dgk~l~~~ 370 (616)
..+. .++|+| |++.|+..
T Consensus 312 ~~V~---------~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 312 DFVT---------GVAWSPLDHSKFTTV 330 (357)
T ss_dssp SCEE---------EEEECSSSTTEEEEE
T ss_pred CCEE---------EEEEeCCCCCEEEEE
Confidence 1122 288998 77766543
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.74 E-value=4.1e-06 Score=83.83 Aligned_cols=192 Identities=6% Similarity=-0.005 Sum_probs=110.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc----eEecccCCCccccccccceEEecCCc-EEEEEec
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIP 106 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspdg~-~l~~~~~ 106 (616)
.+..+.|||||+.|+.... ...|.++++.+++ .+.+..... .+..+.|+|+++ .|+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~~----------d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSW----------DGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET----------TSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEcC----------CCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcC
Confidence 4788999999999877652 2567777777766 444433322 266899999999 7776421
Q ss_pred CCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-CeeecCC---CCceeeee
Q 007140 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGT---PAVYTAVE 181 (616)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~~~l~~---~~~~~~~~ 181 (616)
...|.++++ .. +...+.. ...+..++
T Consensus 78 -------------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 78 -------------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp -------------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred -------------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 134566666 44 4555543 34567899
Q ss_pred ECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC---ce----EEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG---KL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 182 ~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~---~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
|+| ++.|+....+ ..|.+||+.. .. .+.+..+.. ......+.|+|++
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLNSNNTKV-----------KNKIFTMDTNSSR- 162 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESCSSSSSS-----------CCCEEEEEECSSE-
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCeeeEEee-----------CCceEEEEecCCc-
Confidence 999 8888877543 2578888753 00 111111110 0112357788775
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCC-CCc--eE-eccccccccceeecC-CCceEEEeeeccCccEEEEEE
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKP--EI-LHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLV 329 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~-l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~~~ 329 (616)
++.. . ....+.+|+. .. +.. .. ..........+.|+| |+..++.... ++...||.+
T Consensus 163 --l~~~-~-----------~d~~i~i~d~---~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~--dg~i~i~~~ 223 (342)
T 1yfq_A 163 --LIVG-M-----------NNSQVQWFRL---PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI--DGRVAVEFF 223 (342)
T ss_dssp --EEEE-E-----------STTEEEEEES---SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET--TSEEEEEEC
T ss_pred --EEEE-e-----------CCCeEEEEEC---CccccccceeeecCCCCceeEEEECCCCCCEEEEEec--CCcEEEEEE
Confidence 3222 1 2235666676 32 221 11 222344567789999 9887666542 344455555
Q ss_pred eCC
Q 007140 330 CPG 332 (616)
Q Consensus 330 d~~ 332 (616)
+..
T Consensus 224 ~~~ 226 (342)
T 1yfq_A 224 DDQ 226 (342)
T ss_dssp CTT
T ss_pred cCC
Confidence 544
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.72 E-value=5e-06 Score=94.18 Aligned_cols=223 Identities=12% Similarity=0.078 Sum_probs=129.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|||||++|+.... ...|.++++.+++........... +..+.|+||++.|+....
T Consensus 57 ~v~~~~~s~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~----- 117 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGSD----- 117 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEET-----
T ss_pred cEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCcEEEEEecCCCC----EEEEEEeCCCCEEEEEcC-----
Confidence 5889999999999988753 367888899888754433222212 668999999998876421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-Ce-eecC-CCCceeeeeECC-CC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TA-KDFG-TPAVYTAVEPSP-DQ 186 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~-~~l~-~~~~~~~~~~Sp-Dg 186 (616)
...+.++++ ++ .. ..+. ....+..++|+| |+
T Consensus 118 --------------------------------------------dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 118 --------------------------------------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153 (814)
T ss_dssp --------------------------------------------TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEE
T ss_pred --------------------------------------------CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCC
Confidence 124555565 33 22 2232 233567899999 77
Q ss_pred cEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeec--CCCceEEEEEee
Q 007140 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQ 263 (616)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp--dg~~~l~~~~~~ 263 (616)
+.|+....+ ..|.+||+.++. ...+.... ......+.|+| ++.. |+..
T Consensus 154 ~~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~-l~~~--- 204 (814)
T 3mkq_A 154 STFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPY-MITA--- 204 (814)
T ss_dssp EEEEEEETT-------------SEEEEEETTCSSCSEEEECCC------------TTCCCEEEECCSTTCCE-EEEE---
T ss_pred CEEEEEeCC-------------CeEEEEECCCCcceeEEecCC------------CCCEEEEEEEECCCCCE-EEEE---
Confidence 777776543 368899986543 22222100 01134578888 7762 3221
Q ss_pred cCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEe
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (616)
.....+.+|+. ..++.. .+......+..+.|+||+..++.... ++ .|.++|+.++ .....+
T Consensus 205 ---------~~dg~i~~~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg--~v~vwd~~~~--~~~~~~ 266 (814)
T 3mkq_A 205 ---------SDDLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE--DG--TLKIWNSSTY--KVEKTL 266 (814)
T ss_dssp ---------CTTSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEEEEET--TS--CEEEEETTTC--SEEEEE
T ss_pred ---------eCCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CC--eEEEEECCCC--cEEEEe
Confidence 12345666776 433332 23334456678899999987666542 23 4666777763 222222
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 343 DRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 343 ~~~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
...... . ..++|+|+|+.+++.
T Consensus 267 ~~~~~~-v-----~~~~~~~~~~~~~~~ 288 (814)
T 3mkq_A 267 NVGLER-S-----WCIATHPTGRKNYIA 288 (814)
T ss_dssp CCSSSS-E-----EEEEECTTCGGGEEE
T ss_pred ecCCCc-E-----EEEEEccCCCceEEE
Confidence 111110 0 127889998854333
No 113
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.71 E-value=1.1e-05 Score=83.21 Aligned_cols=261 Identities=10% Similarity=0.135 Sum_probs=142.2
Q ss_pred eeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccccc
Q 007140 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (616)
Q Consensus 62 ~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (616)
..|+++++.+|+...+...... ..+..+.|+||++.|+....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~----------------------------------- 154 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLG----------------------------------- 154 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEET-----------------------------------
T ss_pred CeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECC-----------------------------------
Confidence 5789999999987666543211 12668999999998877421
Q ss_pred ccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-
Q 007140 142 LKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD- 217 (616)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~- 217 (616)
...|.++|+ +++ ...+. ....+..++| +++.|+....+ ..+.+||+.
T Consensus 155 --------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~i~d~~~ 205 (401)
T 4aez_A 155 --------------NGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRS-------------GAIHHHDVRI 205 (401)
T ss_dssp --------------TSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETT-------------SEEEEEETTS
T ss_pred --------------CCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCC-------------CCEEEEeccc
Confidence 124556666 443 33343 2234567777 55666666432 368899987
Q ss_pred Cc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ec
Q 007140 218 GK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH 295 (616)
Q Consensus 218 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~ 295 (616)
.+ ....+... ......+.|+||++. |+.. . ....+.+|+. ..++... +.
T Consensus 206 ~~~~~~~~~~~-------------~~~v~~~~~~~~~~~-l~s~-~-----------~d~~v~iwd~---~~~~~~~~~~ 256 (401)
T 4aez_A 206 ANHQIGTLQGH-------------SSEVCGLAWRSDGLQ-LASG-G-----------NDNVVQIWDA---RSSIPKFTKT 256 (401)
T ss_dssp SSCEEEEEECC-------------SSCEEEEEECTTSSE-EEEE-E-----------TTSCEEEEET---TCSSEEEEEC
T ss_pred CcceeeEEcCC-------------CCCeeEEEEcCCCCE-EEEE-e-----------CCCeEEEccC---CCCCccEEec
Confidence 33 33333321 111235889999873 3222 1 2235666776 4434332 33
Q ss_pred cccccccceeecCCCceEEEeee-ccCccEEEEEEeCCCCCCCceEEeec--ccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 296 KLDLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~-~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.....+..+.|+|++..++.... ..++ .|.++|+.++ +....+.. .+. .+.|+++|+.++....
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~--~i~i~d~~~~--~~~~~~~~~~~v~---------~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDK--QIHFWNAATG--ARVNTVDAGSQVT---------SLIWSPHSKEIMSTHG 323 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTC--EEEEEETTTC--CEEEEEECSSCEE---------EEEECSSSSEEEEEEC
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCC--EEEEEECCCC--CEEEEEeCCCcEE---------EEEECCCCCeEEEEee
Confidence 44556778999999876544321 1123 6888888773 32222221 122 2899999998877542
Q ss_pred ecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCc
Q 007140 373 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEIT 452 (616)
Q Consensus 373 ~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~ 452 (616)
.. +....+ +++.+++...+...... ...+.. ..+++++..++.... -.
T Consensus 324 ~~-dg~i~v------------------~~~~~~~~~~~~~~~~h--~~~v~~-------~~~s~dg~~l~s~~~----dg 371 (401)
T 4aez_A 324 FP-DNNLSI------------------WSYSSSGLTKQVDIPAH--DTRVLY-------SALSPDGRILSTAAS----DE 371 (401)
T ss_dssp TT-TCEEEE------------------EEEETTEEEEEEEEECC--SSCCCE-------EEECTTSSEEEEECT----TS
T ss_pred cC-CCcEEE------------------EecCCccceeEEEecCC--CCCEEE-------EEECCCCCEEEEEeC----CC
Confidence 11 112222 34545544443221100 011111 357888876654332 25
Q ss_pred eEEEEeCCCCc
Q 007140 453 QYHILSWPLKK 463 (616)
Q Consensus 453 ~l~~~~~~~~~ 463 (616)
.|.+.++.+++
T Consensus 372 ~i~iw~~~~~~ 382 (401)
T 4aez_A 372 NLKFWRVYDGD 382 (401)
T ss_dssp EEEEEECCC--
T ss_pred cEEEEECCCCc
Confidence 68888887665
No 114
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.70 E-value=5.3e-06 Score=83.47 Aligned_cols=234 Identities=9% Similarity=0.017 Sum_probs=125.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC---CcEEEEEecCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN---STLLIFTIPSS 108 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd---g~~l~~~~~~~ 108 (616)
.+..+.|||||++++.+...+ .+...|.++++.+++...+..... ...+..+.|+|+ |+.|+....
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~-- 88 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDF-- 88 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEET--
T ss_pred ceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecC--
Confidence 588999999999888776421 135788899999887654432211 112568899998 576665421
Q ss_pred CCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC--eeecC-CCCceeee----
Q 007140 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFG-TPAVYTAV---- 180 (616)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~--~~~l~-~~~~~~~~---- 180 (616)
...|.++|+ +++ ...+. ....+..+
T Consensus 89 -----------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 89 -----------------------------------------------GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp -----------------------------------------------TSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred -----------------------------------------------CCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 123445555 232 22232 22233334
Q ss_pred --eECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce--EEEecCCCCCCCCCccccCccCCCCcce----eecC
Q 007140 181 --EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSIS----WRAD 252 (616)
Q Consensus 181 --~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~----wspd 252 (616)
+||||++.|+....+ ..+.+||+..++ ...+........ .....+. |+|+
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 679999998877543 368899987543 333322111000 0011233 7888
Q ss_pred CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecC---CCceEEEeeeccCccEEEEEE
Q 007140 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNETWYKTSQTRTWLV 329 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wsp---Dg~~l~~~~~~~~~~~~l~~~ 329 (616)
++. |+.. .....+.+|+. ..++.............+.|+| ++..|+.... ++ .|.++
T Consensus 180 ~~~-l~~~------------~~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--dg--~i~i~ 239 (357)
T 3i2n_A 180 ERV-VCAG------------YDNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL--EG--KFHVF 239 (357)
T ss_dssp CCE-EEEE------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES--TT--EEEEE
T ss_pred CCE-EEEE------------ccCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC--CC--eEEEE
Confidence 873 3222 12246777776 5444444444455677899999 8877665432 23 45556
Q ss_pred eCCCCCCCceEEe----ecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 330 CPGSKDVAPRVLF----DRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 330 d~~~~~~~~~~l~----~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
|+.++.. ...+. ..... .. ..+.|+|+|+.+++...
T Consensus 240 d~~~~~~-~~~~~~~~~~~~~~-~v-----~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 240 DMRTQHP-TKGFASVSEKAHKS-TV-----WQVRHLPQNRELFLTAG 279 (357)
T ss_dssp EEEEEET-TTEEEEEEEECCSS-CE-----EEEEEETTEEEEEEEEE
T ss_pred eCcCCCc-ccceeeeccCCCcC-CE-----EEEEECCCCCcEEEEEe
Confidence 6554211 11111 01110 00 12789999985555544
No 115
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.70 E-value=2.9e-05 Score=79.35 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=41.5
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
.+....|||||++|+-.+. ...|.+||+.+++........... +..+.|+|||+.|+..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~----------D~~v~iWd~~~~~~~~~~~~h~~~----v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQ----------DGRLIVWNALTSQKTHAIKLHCPW----VMECAFAPNGQSVACG 126 (380)
T ss_dssp CEEEEEECTTSSCEEEEET----------TSEEEEEETTTTEEEEEEECCCTT----CCCCEECTTSSEEEEC
T ss_pred EEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCccceEEecCCCC----EEEEEECCCCCEEEEe
Confidence 4789999999998776542 357788899887654333222212 5678999999987763
No 116
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.68 E-value=2.5e-06 Score=88.05 Aligned_cols=227 Identities=11% Similarity=0.015 Sum_probs=125.7
Q ss_pred cccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCc--------eEecccCCCccccccccceEEecCCc-EE
Q 007140 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--------AKPLFESPDICLNAVFGSFVWVNNST-LL 101 (616)
Q Consensus 32 ~~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~--------~~~lt~~~~~~~~~~~~~~~wspdg~-~l 101 (616)
.+..+.|+| +++.|+.... ...|.++++.++. ...+..+.. .+..+.|+|+++ .|
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~----------dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~l 147 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSE----------DCTVMVWEIPDGGLVLPLREPVITLEGHTK-----RVGIVAWHPTAQNVL 147 (402)
T ss_dssp CEEEEEECTTCTTEEEEEET----------TSEEEEEECCTTCCSSCBCSCSEEEECCSS-----CEEEEEECSSBTTEE
T ss_pred CEEEEEeCCCCCCEEEEEeC----------CCeEEEEEccCCCCccccCCceEEecCCCC-----eEEEEEECcCCCCEE
Confidence 578999999 8887766542 2567777888763 122322222 256889999985 44
Q ss_pred EEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeec--C-CCCc
Q 007140 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDF--G-TPAV 176 (616)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l--~-~~~~ 176 (616)
+.... ...|.++|+ +++ ...+ . ....
T Consensus 148 ~s~~~-------------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 148 LSAGC-------------------------------------------------DNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp EEEET-------------------------------------------------TSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred EEEcC-------------------------------------------------CCEEEEEECCCCCccEEEecCCCCCc
Confidence 44210 134667777 453 3344 2 3345
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEe-cCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-REL-CDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
+..++|+|||+.|+....+ ..|.+||+..++. ..+ .... . .....+.|+||++
T Consensus 179 v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKDRPHE---G---------TRPVHAVFVSEGK 233 (402)
T ss_dssp EEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEECSSC---S---------SSCCEEEECSTTE
T ss_pred eEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeeccCCC---C---------CcceEEEEcCCCc
Confidence 6789999999999887643 3689999876543 333 1110 0 0123578999986
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-eEec--cccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
++.+.... .....+.+|+. ..++. ..+. ........+.|+||+..|+..... ++ .|.++++
T Consensus 234 --~l~~g~~~--------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~-dg--~i~i~d~ 297 (402)
T 2aq5_A 234 --ILTTGFSR--------MSERQVALWDT---KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG-DS--SIRYFEI 297 (402)
T ss_dssp --EEEEEECT--------TCCEEEEEEET---TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT-CS--CEEEEEE
T ss_pred --EEEEeccC--------CCCceEEEEcC---ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC-CC--eEEEEEe
Confidence 33332110 12345667776 33222 2221 233446678999999876543322 23 3555666
Q ss_pred CCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEE
Q 007140 332 GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (616)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~ 368 (616)
.+++.....+......... ..++|+|+|+.++
T Consensus 298 ~~~~~~~~~l~~~~~~~~v-----~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 298 TSEAPFLHYLSMFSSKESQ-----RGMGYMPKRGLEV 329 (402)
T ss_dssp CSSTTCEEEEEEECCSSCC-----SEEEECCGGGSCG
T ss_pred cCCCcceEeecccccCCcc-----cceEEecccccce
Confidence 5531112233221111111 1288999987643
No 117
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.68 E-value=2.3e-05 Score=87.15 Aligned_cols=228 Identities=12% Similarity=0.079 Sum_probs=131.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc------eEecccCCCccccccccceEEecCCcEEEEEe
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------AKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~------~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
.+..++|+|++..+.++... + ..|.++++..+. .+.+..+.. . +..+.|+|||+.|+...
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~-------D--~~i~~W~~~~~~~~~~~~~~~~~~h~~-~----v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASR-------D--KSIILWKLTKDDKAYGVAQRRLTGHSH-F----VEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CEEEEECCTTCCSEEEEEET-------T--SEEEEEECCCSTTCSCEEEEEEECCSS-C----EEEEEECTTSSEEEEEE
T ss_pred eeEEEEecCCCCCEEEEEeC-------C--CcEEEEEccCCCcccccccceecCCCC-c----EEEEEECCCCCEEEEEe
Confidence 47788999998766666543 2 466666776532 233433332 1 56889999999877641
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeec-CCCCceeeeeE
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDF-GTPAVYTAVEP 182 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l-~~~~~~~~~~~ 182 (616)
. ...|.++|+ +++ .+.+ .+...+..++|
T Consensus 450 ~-------------------------------------------------Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 W-------------------------------------------------DGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp T-------------------------------------------------TSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred C-------------------------------------------------CCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 1 135666777 453 3333 33445678999
Q ss_pred CCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEe
Q 007140 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (616)
Q Consensus 183 SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (616)
||||+.|+..+.+ ..|.+||+.+.....+...... .......+.|+|++...++....
T Consensus 481 s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 481 SLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGGEG---------HRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSTTS---------CSSCEEEEEECSCSSSCEEEEEE
T ss_pred eCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCCCC---------CCCcEEEEEEeCCCCcceEEEEe
Confidence 9999998877643 2688899877655444321100 00112347888887432322211
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEE
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (616)
....+.+|+. ..++.. .+......+..+.|+|||..|+.... ++ .|.+.|+.++ +.+
T Consensus 539 -----------~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~--Dg--~i~iwd~~~~----~~~ 596 (694)
T 3dm0_A 539 -----------WDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK--DG--VVLLWDLAEG----KKL 596 (694)
T ss_dssp -----------TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TS--BCEEEETTTT----EEE
T ss_pred -----------CCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC--CC--eEEEEECCCC----ceE
Confidence 2235666676 443433 24444556778999999998776542 23 3556677662 333
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 342 ~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
......... ..++|+|++..++...
T Consensus 597 ~~~~~~~~v-----~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 597 YSLEANSVI-----HALCFSPNRYWLCAAT 621 (694)
T ss_dssp ECCBCSSCE-----EEEEECSSSSEEEEEE
T ss_pred EEecCCCcE-----EEEEEcCCCcEEEEEc
Confidence 211111111 1278999998766543
No 118
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.67 E-value=1e-05 Score=96.43 Aligned_cols=224 Identities=10% Similarity=0.119 Sum_probs=127.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+...+|||||++||.... ...|.+|++.+++........... +..+.|+|||+.|+....
T Consensus 617 ~v~~~~~s~~~~~l~s~~~----------d~~i~vw~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~~~----- 677 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGA----------DKTLQVFKAETGEKLLDIKAHEDE----VLCCAFSSDDSYIATCSA----- 677 (1249)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred cEEEEEECCCCCEEEEEeC----------CCeEEEEECCCCCEEEEeccCCCC----EEEEEEecCCCEEEEEeC-----
Confidence 5788999999999876642 357888899988754333222222 678999999998877411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...|.++|+ +++. ..+. ....+..+.|+|+++.
T Consensus 678 --------------------------------------------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 713 (1249)
T 3sfz_A 678 --------------------------------------------DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH 713 (1249)
T ss_dssp --------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSC
T ss_pred --------------------------------------------CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCc
Confidence 135677777 5543 3332 3335678999997553
Q ss_pred E-EEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 189 V-LITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 189 i-~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
. +++... ...+.+||+.+++ ...+... ......+.|+||++. |+.. .
T Consensus 714 ~~l~sg~~------------d~~v~vwd~~~~~~~~~~~~h-------------~~~v~~~~~sp~~~~-l~s~-s---- 762 (1249)
T 3sfz_A 714 LLLATGSN------------DFFLKLWDLNQKECRNTMFGH-------------TNSVNHCRFSPDDEL-LASC-S---- 762 (1249)
T ss_dssp CEEEEEET------------TSCEEEEETTSSSEEEEECCC-------------SSCEEEEEECSSTTE-EEEE-E----
T ss_pred eEEEEEeC------------CCeEEEEECCCcchhheecCC-------------CCCEEEEEEecCCCE-EEEE-E----
Confidence 3 333222 2368899987554 3333321 111235789999873 3222 1
Q ss_pred CcccccCCCceeEeccCCCCCCCCceE-ec-------------cccccccceeecCCCceEEEeeeccCccEEEEEEeCC
Q 007140 267 DANVEVSPRDIIYTQPAEPAEGEKPEI-LH-------------KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~-------------~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (616)
....+.+|+. ..++... +. ........+.|+|||..++.... + .+.++++.
T Consensus 763 -------~dg~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---~--~v~~~d~~ 827 (1249)
T 3sfz_A 763 -------ADGTLRLWDV---RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK---N--KVLLFDIH 827 (1249)
T ss_dssp -------SSSEEEEEEG---GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET---T--EEEEEETT
T ss_pred -------CCCeEEEEeC---CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC---C--cEEEEEec
Confidence 1223444444 2221111 10 01123556789999998766542 2 67888887
Q ss_pred CCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 333 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 333 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
++. ....+..... . ....+.|+|+|+.++...
T Consensus 828 ~~~-~~~~~~~~~~-~-----~v~~~~~sp~~~~l~~~~ 859 (1249)
T 3sfz_A 828 TSG-LLAEIHTGHH-S-----TIQYCDFSPYDHLAVIAL 859 (1249)
T ss_dssp TCC-EEEEEECSSS-S-----CCCEEEECSSTTEEEEEC
T ss_pred CCC-ceeEEcCCCC-C-----ceEEEEEcCCCCEEEEEe
Confidence 742 1122211111 1 112388999999877654
No 119
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.67 E-value=3.8e-05 Score=76.37 Aligned_cols=225 Identities=8% Similarity=0.058 Sum_probs=123.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc-----e-EecccCCCccccccccceEEecCCcEEEEEe
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-----A-KPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~-----~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
.+..+.|+|++..++++... + ..|.++++.+.+ + +.+..+.. .+..+.|+|||+.|+...
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~-------D--~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASR-------D--KTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSAS 84 (319)
T ss_dssp CEEEEEECSSCTTEEEEEET-------T--SEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred eEEEEEccCCCccEEEEecC-------C--ccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEEe
Confidence 47788999987555555543 3 345555554321 1 22222222 156789999999876642
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeE
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEP 182 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~ 182 (616)
. ...|.++|+ +++ ...+. ....+..++|
T Consensus 85 ~-------------------------------------------------D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~ 115 (319)
T 3frx_A 85 W-------------------------------------------------DKTLRLWDVATGETYQRFVGHKSDVMSVDI 115 (319)
T ss_dssp T-------------------------------------------------TSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred C-------------------------------------------------CCEEEEEECCCCCeeEEEccCCCcEEEEEE
Confidence 1 134666677 554 33332 3345678999
Q ss_pred CCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCc---eEEE
Q 007140 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS---TLYW 259 (616)
Q Consensus 183 SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~---~l~~ 259 (616)
+|+++.|+....+ ..+.+||+.++....+.... .....+.|+|.++. ...+
T Consensus 116 ~~~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 116 DKKASMIISGSRD-------------KTIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp CTTSCEEEEEETT-------------SCEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCEE
T ss_pred cCCCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccEE
Confidence 9999988877643 25888999877665543211 01123556664321 0111
Q ss_pred EEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCc
Q 007140 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (616)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (616)
+.. .....+.+|+. ..++.. .+......+..+.|+|||..|+.... ++ .|.+.|+.++ +.
T Consensus 170 ~s~----------~~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~--dg--~i~iwd~~~~--~~ 230 (319)
T 3frx_A 170 ISA----------GNDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAGK--DG--EIMLWNLAAK--KA 230 (319)
T ss_dssp EEE----------ETTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEET--TC--EEEEEETTTT--EE
T ss_pred EEE----------eCCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEeC--CC--eEEEEECCCC--cE
Confidence 111 12234566665 332222 23334455677899999998776542 23 5667787763 21
Q ss_pred eEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 339 ~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
....... ... ..++|+|+|..++...
T Consensus 231 ~~~~~~~--~~v-----~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 231 MYTLSAQ--DEV-----FSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEECC--SCE-----EEEEECSSSSEEEEEE
T ss_pred EEEecCC--CcE-----EEEEEcCCCCEEEEEc
Confidence 1111111 111 1289999999876654
No 120
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.67 E-value=4.8e-05 Score=77.55 Aligned_cols=91 Identities=13% Similarity=-0.123 Sum_probs=50.0
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCC-Cccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DICL 85 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~-~~~~ 85 (616)
|++.++. +++.. ..++.+... .+.+||||++|++.........-......|.++|+++.+...-.... ....
T Consensus 49 v~v~D~~----t~~~~--~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 49 QWVLDAG----SGSIL--GHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 121 (373)
T ss_pred EEEEECC----CCeEE--EEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 3555543 35543 235555444 99999999997776431100000012467889999887653321111 0000
Q ss_pred --cccccceEEecCCcEEEEE
Q 007140 86 --NAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 86 --~~~~~~~~wspdg~~l~~~ 104 (616)
......+.|||||++|++.
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFF 142 (373)
T ss_pred ccCCCccceEECCCCCEEEEE
Confidence 0013478999999998885
No 121
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.67 E-value=7e-05 Score=74.59 Aligned_cols=197 Identities=13% Similarity=0.095 Sum_probs=104.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce------EecccCCCccccccccceEEecCCcEEEEEe
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------KPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~------~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
.+..++|||++..++++... + ..|.+|++..++. +.+..+.. .+..+.|+|||+.|+...
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~-------D--~~i~vWd~~~~~~~~~~~~~~l~~h~~-----~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASR-------D--KTIIMWKLTRDETNYGIPQRALRGHSH-----FVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEECTTCTTEEEEEET-------T--SCEEEEEECCSSSCSEEEEEEECCCSS-----CEEEEEECTTSSEEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcC-------C--CeEEEEECCCCCcccceeeEEEeCCCC-----CEEEEEECCCCCEEEEEc
Confidence 48899999996544454433 3 3566667665431 12211111 266889999999877642
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC-CC-eeec-CCCCceeeeeE
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GT-AKDF-GTPAVYTAVEP 182 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~-g~-~~~l-~~~~~~~~~~~ 182 (616)
.+ ..+.+++.. +. .... ..........+
T Consensus 106 ~d-------------------------------------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (340)
T 4aow_A 106 WD-------------------------------------------------GTLRLWDLTTGTTTRRFVGHTKDVLSVAF 136 (340)
T ss_dssp TT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred cc-------------------------------------------------ccceEEeecccceeeeecCCCCceeEEEE
Confidence 11 123334442 21 1111 12223456788
Q ss_pred CCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEe
Q 007140 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (616)
Q Consensus 183 SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (616)
+|+++.|+....+ ..+.+||+.+.....+..... ........|++++...++....
T Consensus 137 ~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 137 SSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDESH-----------SEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSSC-----------SSCEEEEEECSCSSSCEEEEEE
T ss_pred eecCccceeecCC-------------CeEEEEEeCCCceEEEEeccc-----------cCcccceEEccCCCCcEEEEEc
Confidence 9999988876543 257788877654433322100 0011235677776543332211
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
....+.+++. ..++.. .+......+..+.|+||+..|+.... ++ .|.++|+.+
T Consensus 193 -----------~d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--Dg--~i~iwd~~~ 246 (340)
T 4aow_A 193 -----------WDKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK--DG--QAMLWDLNE 246 (340)
T ss_dssp -----------TTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TC--EEEEEETTT
T ss_pred -----------CCCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEeC--CC--eEEEEEecc
Confidence 1224555565 333322 23333445677899999998766542 23 566778876
No 122
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.66 E-value=1.5e-05 Score=79.45 Aligned_cols=226 Identities=12% Similarity=0.135 Sum_probs=123.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|||++|+-.+. ...|.++|+.+++..+........ +..+.|+|+++.|+....+
T Consensus 67 ~v~~~~~s~dg~~l~s~s~----------D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s~D---- 128 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASW----------DKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKASMIISGSRD---- 128 (319)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSCEEEEEETT----
T ss_pred cEEEEEECCCCCEEEEEeC----------CCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCCCEEEEEeCC----
Confidence 4678899999998776542 357788899988754432222212 5688999999987664211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeec-CCCCceeeeeECCCCc--
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDF-GTPAVYTAVEPSPDQK-- 187 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l-~~~~~~~~~~~SpDg~-- 187 (616)
..+.++|+.++ ...+ .....+..+.|+|+++
T Consensus 129 ---------------------------------------------~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 129 ---------------------------------------------KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp ---------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECCC----
T ss_pred ---------------------------------------------CeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCC
Confidence 23444555442 2222 2333556788888543
Q ss_pred ----EEEEEeccCCCcccccCcccCccEEEEeCCCceEE-EecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEe
Q 007140 188 ----YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (616)
Q Consensus 188 ----~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (616)
.|+....+ ..+.+||+...+.. .+... ......+.|+|||+. |+-.
T Consensus 164 ~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~sp~g~~-l~s~-- 214 (319)
T 3frx_A 164 DDSVTIISAGND-------------KMVKAWNLNQFQIEADFIGH-------------NSNINTLTASPDGTL-IASA-- 214 (319)
T ss_dssp --CCEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------CSCEEEEEECTTSSE-EEEE--
T ss_pred CCccEEEEEeCC-------------CEEEEEECCcchhheeecCC-------------CCcEEEEEEcCCCCE-EEEE--
Confidence 55544432 36889998765432 22211 111235889999983 3221
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEE-
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL- 341 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l- 341 (616)
.....+.+|+. ..++.............+.|+||+..++.... . .+.+++++.. ..+
T Consensus 215 ----------~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~---~--~i~v~~~~~~----~~~~ 272 (319)
T 3frx_A 215 ----------GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA---T--GIKVFSLDPQ----YLVD 272 (319)
T ss_dssp ----------ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEET---T--EEEEEEETTE----EEEE
T ss_pred ----------eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC---C--CcEEEEeCcC----eeee
Confidence 12346777776 43333222223345677899999987765432 2 2444444431 111
Q ss_pred -eecccccc--cCCCCCCCeeeCCCCCEEEEEe
Q 007140 342 -FDRVFENV--YSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 342 -~~~~~~~~--~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
........ ...+....++|+|||++|+...
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 11110000 0000111378999999887554
No 123
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.66 E-value=2.3e-05 Score=80.20 Aligned_cols=229 Identities=10% Similarity=-0.022 Sum_probs=122.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc-------eEecccCCCccccccccceEEecC----C--
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNN----S-- 98 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~-------~~~lt~~~~~~~~~~~~~~~wspd----g-- 98 (616)
.+....|+| +.|+... ....|.++++.+++ ...+..... .+..+.|+|+ |
T Consensus 18 ~i~~~~~~~--~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCS----------GDGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp CEEEEEECS--SEEEEEE----------TTSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred CeEEEEecC--CeEEEEc----------CCCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 477889999 5555443 23678888998876 444432222 1568899999 8
Q ss_pred -cEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC------eee
Q 007140 99 -TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT------AKD 170 (616)
Q Consensus 99 -~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~------~~~ 170 (616)
+.|+.... ...|.++++ +++ ...
T Consensus 81 ~~~l~s~~~-------------------------------------------------dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTSF-------------------------------------------------SGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEET-------------------------------------------------TSCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEcC-------------------------------------------------CCCEEEEEccCCccccccccee
Confidence 77666421 123444454 332 334
Q ss_pred cCCC------CceeeeeEC----CCCcE-EEEEeccCCCcccccCcccCccEEEEeCCC------c-eEE-----EecC-
Q 007140 171 FGTP------AVYTAVEPS----PDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDG------K-LVR-----ELCD- 226 (616)
Q Consensus 171 l~~~------~~~~~~~~S----pDg~~-i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~-~~~-----~l~~- 226 (616)
+... ..+..++|+ |+++. |+....+ ..|.+||+.. + ... .+..
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 4322 456789999 99999 7766543 2577888765 2 222 2110
Q ss_pred CCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ecc---c---cc
Q 007140 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK---L---DL 299 (616)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~---~---~~ 299 (616)
.... .........+.|+|++ . |+.. .....+.+|+. ..++... +.. . ..
T Consensus 179 ~~~~-------~~~~~~i~~~~~~~~~-~-l~~~------------~~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 179 VESP-------MTPSQFATSVDISERG-L-IATG------------FNNGTVQISEL---STLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp ECCS-------SSSCCCCCEEEECTTS-E-EEEE------------CTTSEEEEEET---TTTEEEEEEECCC---CCCC
T ss_pred eccc-------cCCCCCceEEEECCCc-e-EEEE------------eCCCcEEEEEC---CCCceeEEEeccccccccCC
Confidence 0000 0001113458899998 3 3322 22345667776 4333332 322 2 45
Q ss_pred cccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecc------------cccccCCCCCCCeeeCCCCCEE
Q 007140 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV------------FENVYSDPGSPMMTRTSTGTNV 367 (616)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~------------~~~~~~~~g~~~~~~s~dgk~l 367 (616)
....+.|+||+..|+.... +.....|.++|+.++ +....+... .... ...+.|+|+|+.|
T Consensus 235 ~i~~i~~~~~~~~l~~~~~-d~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l 306 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHD-SNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSW-----VMSLSFNDSGETL 306 (397)
T ss_dssp CEEEEEECSSTTEEEEEEE-ETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSC-----EEEEEECSSSSEE
T ss_pred ccceEEECCCCCEEEEEec-CCCCceEEEEECCCC--cccceeccCcccccccccccccCCc-----EEEEEECCCCCEE
Confidence 5678999999987665432 111136888888763 222222210 0000 1138899999987
Q ss_pred EEEe
Q 007140 368 IAKI 371 (616)
Q Consensus 368 ~~~~ 371 (616)
+...
T Consensus 307 ~~~~ 310 (397)
T 1sq9_A 307 CSAG 310 (397)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 124
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.65 E-value=8.7e-06 Score=83.75 Aligned_cols=200 Identities=17% Similarity=0.154 Sum_probs=113.8
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
+..+.|||||++||.... ...|.++|+.+++........... +..+.|+|+++.|+....
T Consensus 126 v~~v~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~s~s~------ 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE----------DRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLVSGSG------ 185 (393)
T ss_dssp EEEEEECTTSSEEEEEET----------TSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEET------
T ss_pred EEEEEECCCCCEEEEEcC----------CCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCCCEEEEecC------
Confidence 568899999999876542 357788899988765443322222 568999999998766421
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecCCCCceeeeeECC-CCcEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSP-DQKYV 189 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~~~~~~~~~~Sp-Dg~~i 189 (616)
...+.++|+ +++. ..+.....+..++|+| ||+.|
T Consensus 186 -------------------------------------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 186 -------------------------------------------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp -------------------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred -------------------------------------------CCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 134556676 4432 2333334566889999 88888
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
+....+ ..+.+||+.++. ...+...... ..+.......+.|+|||+. |+ ...
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~------~~~h~~~v~~v~~~~~g~~-l~-s~s------ 275 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENES------GTGHKDSVYSVVFTRDGQS-VV-SGS------ 275 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSE-EE-EEE------
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeecccccC------CCCCCCCEEEEEECCCCCE-EE-EEe------
Confidence 877643 258899987553 3333210000 0000111235889999973 32 211
Q ss_pred ccccCCCceeEeccCCCCCCC------------Cc-eEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGE------------KP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g------------~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
....+.+|+. ... .. ..+......+..+.|+|++..|+.... ++ .|.+.|+.++
T Consensus 276 -----~d~~v~~wd~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~--D~--~v~iwd~~~~ 342 (393)
T 1erj_A 276 -----LDRSVKLWNL---QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK--DR--GVLFWDKKSG 342 (393)
T ss_dssp -----TTSEEEEEEC------------------CEEEEEECCSSCEEEEEECGGGCEEEEEET--TS--EEEEEETTTC
T ss_pred -----CCCEEEEEEC---CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC--CC--eEEEEECCCC
Confidence 1224444554 211 11 112222334567889999987766542 23 5777788763
No 125
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.64 E-value=1.6e-05 Score=82.31 Aligned_cols=223 Identities=16% Similarity=0.130 Sum_probs=128.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|||+.|+-.+. + ..|.++|+.+++..+........ +..+.|+|+++.|+....
T Consensus 152 ~V~~v~~~~~~~~l~sgs~--------D--~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~p~~~~l~s~s~----- 212 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSA--------D--MTIKLWDFQGFECIRTMHGHDHN----VSSVSIMPNGDHIVSASR----- 212 (410)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCCCEEETTSSCEEECCCCCSSC----EEEEEECSSSSEEEEEET-----
T ss_pred cEEEEEEcCCCCEEEEEeC--------C--CeEEEEeCCCCceeEEEcCCCCC----EEEEEEeCCCCEEEEEeC-----
Confidence 4788999999997765542 2 45666798887754433222212 668899999998766411
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...+.++|+ ++. ...+. ....+..+.++|||+.
T Consensus 213 --------------------------------------------D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 213 --------------------------------------------DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248 (410)
T ss_dssp --------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred --------------------------------------------CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCE
Confidence 134566677 453 33332 2335678899999998
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCc------------
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS------------ 255 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~------------ 255 (616)
|+....+ ..+.+||+.+++ ...+.... .....+.|+|++..
T Consensus 249 l~s~s~D-------------~~v~vwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 249 IASCSND-------------QTVRVWVVATKECKAELREHR-------------HVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred EEEEcCC-------------CeEEEEECCCCceeeEecCCC-------------ceEEEEEEcCcccccchhhhcccccc
Confidence 8877643 258889987553 33332210 01224667776321
Q ss_pred ------eEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEE
Q 007140 256 ------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (616)
Q Consensus 256 ------~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (616)
.++.. ......+.+|+. ..++.. .+......+..+.|+|+|..|+.... ++ .|.+
T Consensus 303 ~~~~~g~~l~s-----------gs~D~~i~iwd~---~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--D~--~i~v 364 (410)
T 1vyh_C 303 KSGKPGPFLLS-----------GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD--DK--TLRV 364 (410)
T ss_dssp -----CCEEEE-----------EETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSCEEEEET--TT--EEEE
T ss_pred ccCCCCCEEEE-----------EeCCCeEEEEEC---CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC--CC--eEEE
Confidence 01111 112345677776 433332 23334455677899999998776542 23 4666
Q ss_pred EeCCCCCCCceEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 329 VCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 329 ~d~~~~~~~~~~l~~--~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.|+.++. ....+.. ..+.. +.|+|++..|+...
T Consensus 365 wd~~~~~-~~~~~~~h~~~v~~---------l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 365 WDYKNKR-CMKTLNAHEHFVTS---------LDFHKTAPYVVTGS 399 (410)
T ss_dssp ECCTTSC-CCEEEECCSSCEEE---------EEECSSSSCEEEEE
T ss_pred EECCCCc-eEEEEcCCCCcEEE---------EEEcCCCCEEEEEe
Confidence 7776632 2233321 11222 88999998766443
No 126
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.63 E-value=2.3e-05 Score=78.84 Aligned_cols=229 Identities=10% Similarity=0.066 Sum_probs=122.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEe-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
.+....|||||+.|+-.+. ...|.++|+.+++... +..+.. . +..+.|+||++.|+....
T Consensus 78 ~V~~~~~~~~~~~l~s~s~----------D~~v~lwd~~~~~~~~~~~~h~~-~----v~~v~~sp~~~~l~s~~~---- 138 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSW----------DKTLRLWDLRTGTTYKRFVGHQS-E----VYSVAFSPDNRQILSAGA---- 138 (343)
T ss_dssp CEEEEEECSSTTEEEEEET----------TSEEEEEETTSSCEEEEEECCCS-C----EEEEEECSSTTEEEEEET----
T ss_pred ceEEEEECCCCCEEEEEcC----------CCcEEEEECCCCcEEEEEcCCCC-c----EEEEEECCCCCEEEEEcC----
Confidence 4778899999998764432 3577888999887543 322222 2 668999999998776421
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecC----CCCceeeeeECCC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG----TPAVYTAVEPSPD 185 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~----~~~~~~~~~~SpD 185 (616)
...|.++|+.++ ...+. ....+..++|+|+
T Consensus 139 ---------------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 139 ---------------------------------------------EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp ---------------------------------------------TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred ---------------------------------------------CCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 123444455332 11111 2224567888888
Q ss_pred C----------cEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCc
Q 007140 186 Q----------KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 186 g----------~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
+ ..|+....+ ..|.+||..+.....+.... .....+.|+|||+.
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~h~-------------~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWD-------------GRLKVWNTNFQIRYTFKAHE-------------SNVNHLSISPNGKY 227 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETT-------------SEEEEEETTTEEEEEEECCS-------------SCEEEEEECTTSSE
T ss_pred cccccccCCCCCEEEEEcCC-------------CEEEEEcCCCceeEEEcCcc-------------ccceEEEECCCCCE
Confidence 7 455544432 36888886655444433210 11235889999983
Q ss_pred eEEEEEeecCCCcccccCCCceeEeccCCCCCC-CCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
|+-. .....+.+|+. .. +...........+..+.|+||+..++... + + .+.++++.+.
T Consensus 228 -l~sg------------s~dg~v~iwd~---~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~--d-~--~v~iw~~~~~ 286 (343)
T 2xzm_R 228 -IATG------------GKDKKLLIWDI---LNLTYPQREFDAGSTINQIAFNPKLQWVAVGT--D-Q--GVKIFNLMTQ 286 (343)
T ss_dssp -EEEE------------ETTCEEEEEES---SCCSSCSEEEECSSCEEEEEECSSSCEEEEEE--S-S--CEEEEESSSC
T ss_pred -EEEE------------cCCCeEEEEEC---CCCcccceeecCCCcEEEEEECCCCCEEEEEC--C-C--CEEEEEeCCC
Confidence 3221 12235666665 21 12222222334467889999988665433 1 2 3555666553
Q ss_pred CCCceEEeec-cccccc---CC-CCCCCeeeCCCCCEEEEEe
Q 007140 335 DVAPRVLFDR-VFENVY---SD-PGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 335 ~~~~~~l~~~-~~~~~~---~~-~g~~~~~~s~dgk~l~~~~ 371 (616)
...+...... ...... .. +....++|+|+|+.|+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 287 SKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp CSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 2111111110 000000 00 0011378999999876543
No 127
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.62 E-value=2.3e-05 Score=76.97 Aligned_cols=240 Identities=8% Similarity=0.034 Sum_probs=130.2
Q ss_pred CCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC
Q 007140 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN 97 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd 97 (616)
..+.+.+.. .......|.|+|||+.|+++... ...|++++.+++ .+.+..... . ...+.+++|
T Consensus 17 ~~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~---------~~~i~~~~~~~~-~~~~~~~~~-~----~~~l~~~~d 79 (296)
T 3e5z_A 17 GAEARRLAD--GFTWTEGPVYVPARSAVIFSDVR---------QNRTWAWSDDGQ-LSPEMHPSH-H----QNGHCLNKQ 79 (296)
T ss_dssp TCCCEEEEC--CCSSEEEEEEEGGGTEEEEEEGG---------GTEEEEEETTSC-EEEEESSCS-S----EEEEEECTT
T ss_pred CCcEEEEec--CCccccCCeEeCCCCEEEEEeCC---------CCEEEEEECCCC-eEEEECCCC-C----cceeeECCC
Confidence 345566652 22246689999999988887642 468999999988 555543222 1 457889999
Q ss_pred CcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC--
Q 007140 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-- 174 (616)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~-- 174 (616)
|+.++.. . ....|+++|. +|+.+.+...
T Consensus 80 g~l~v~~-~------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 80 GHLIACS-H------------------------------------------------GLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp CCEEEEE-T------------------------------------------------TTTEEEEECSTTCCEEEEECEET
T ss_pred CcEEEEe-c------------------------------------------------CCCeEEEEcCCCCcEEEEeeccC
Confidence 9854332 0 0135777777 6665544321
Q ss_pred ----CceeeeeECCCCcEEEEEecc----CCCc-ccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCC
Q 007140 175 ----AVYTAVEPSPDQKYVLITSMH----RPYS-YKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR 245 (616)
Q Consensus 175 ----~~~~~~~~SpDg~~i~~~~~~----~~~~-~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (616)
.....++++|||+ |+++... .... ...........|+.++.. ++...+.... ....
T Consensus 111 ~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~ 175 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPN 175 (296)
T ss_dssp TEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEE
T ss_pred CCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCc
Confidence 1234689999997 4554210 0000 000000012378888877 4443332200 0123
Q ss_pred cceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCC-CCCc---eEeccc-cccccceeecCCCceEEEeeecc
Q 007140 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKP---EILHKL-DLRFRSVSWCDDSLALVNETWYK 320 (616)
Q Consensus 246 ~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~---~~l~~~-~~~~~~~~wspDg~~l~~~~~~~ 320 (616)
.+.|+|||+. | +.. .....+++++. . .|.. ..+... ......+.+++||..++.. .
T Consensus 176 gi~~s~dg~~-l-v~~-----------~~~~~i~~~~~---~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~-- 236 (296)
T 3e5z_A 176 GLAFLPSGNL-L-VSD-----------TGDNATHRYCL---NARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-G-- 236 (296)
T ss_dssp EEEECTTSCE-E-EEE-----------TTTTEEEEEEE---CSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-T--
T ss_pred cEEECCCCCE-E-EEe-----------CCCCeEEEEEE---CCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-C--
Confidence 5889999983 3 431 11235555554 2 2343 222211 2234568899999865554 1
Q ss_pred CccEEEEEEeCCCCCCCceEEeec-ccccccCCCCCCCeee-CCCCCEEEEEe
Q 007140 321 TSQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTR-TSTGTNVIAKI 371 (616)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~-~~~~~~~~~g~~~~~~-s~dgk~l~~~~ 371 (616)
..|++++.++. ....+... .+. .+++ ++||+.|++..
T Consensus 237 ---~~v~~~~~~g~--~~~~~~~~~~~~---------~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 237 ---DGVHVLTPDGD--ELGRVLTPQTTS---------NLCFGGPEGRTLYMTV 275 (296)
T ss_dssp ---TEEEEECTTSC--EEEEEECSSCCC---------EEEEESTTSCEEEEEE
T ss_pred ---CeEEEECCCCC--EEEEEECCCCce---------eEEEECCCCCEEEEEc
Confidence 26999998751 11222111 111 2667 68888888775
No 128
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.60 E-value=2e-05 Score=81.21 Aligned_cols=149 Identities=13% Similarity=0.050 Sum_probs=82.4
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEe--cCCCCCCCCCccccCccCCCCcceeec
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VREL--CDLPPAEDIPVCYNSVREGMRSISWRA 251 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l--~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (616)
..+..++|+|+|+.++++.... ..|.+||+..++ ...+ ... ......+.|+|
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~-------------~~~v~~~~~~~ 186 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCD------------NVILVWDVGTGAAVLTLGPDVH-------------PDTIYSVDWSR 186 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETT------------SCEEEEETTTTEEEEEECTTTC-------------CSCEEEEEECT
T ss_pred CeEEEEEECcCCCCEEEEEcCC------------CEEEEEECCCCCccEEEecCCC-------------CCceEEEEECC
Confidence 4567899999996444443322 368999987654 3333 111 11124588999
Q ss_pred CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-e-cccc-ccccceeecCCCceEEEeeeccCccEEEEE
Q 007140 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-L-HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (616)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l-~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (616)
|++. |+.. .....+.+|+. ..++... + .... .....+.|+||+..|+.... ......|.+
T Consensus 187 ~~~~-l~~~------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~i 249 (402)
T 2aq5_A 187 DGAL-ICTS------------CRDKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVAL 249 (402)
T ss_dssp TSSC-EEEE------------ETTSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEE
T ss_pred CCCE-EEEE------------ecCCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEE
Confidence 9974 3322 12346777776 4333332 2 1222 23567899999987665410 011236888
Q ss_pred EeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 329 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 329 ~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
+|+.+.+ .+..+....... +...+.|+++|+.+++..
T Consensus 250 wd~~~~~-~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 250 WDTKHLE-EPLSLQELDTSS-----GVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp EETTBCS-SCSEEEECCCCS-----SCEEEEEETTTTEEEEEE
T ss_pred EcCcccc-CCceEEeccCCC-----ceeEEEEcCCCCEEEEEE
Confidence 8887642 222222111110 112388999999887665
No 129
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.60 E-value=1e-05 Score=79.73 Aligned_cols=230 Identities=9% Similarity=0.023 Sum_probs=125.4
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...|.|+|+++.|+|+-. ....|++++.++++.+.+. ... ....+.|++||+. ++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~---------~~~~i~~~d~~~~~~~~~~-~~~-----~~~~i~~~~dG~l-~v~~------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDI---------PAKKVCRWDSFTKQVQRVT-MDA-----PVSSVALRQSGGY-VATI------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEET---------TTTEEEEEETTTCCEEEEE-CSS-----CEEEEEEBTTSSE-EEEE-------
T ss_pred ccCCeEECCCCEEEEEEC---------CCCEEEEEECCCCcEEEEe-CCC-----ceEEEEECCCCCE-EEEE-------
Confidence 458999999998888642 3578999999988765442 222 1567889999993 3321
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC------CceeeeeECCC
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~------~~~~~~~~SpD 185 (616)
...|+++|+ +++.+.+... .....+.++||
T Consensus 72 -------------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 72 -------------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp -------------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred -------------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 124566666 4444433211 12457899999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecC
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (616)
|+ |++.......... ........||+++.+++........ .....+.|+||++. ||+...
T Consensus 109 G~-l~~~~~~~~~~~~-~~~~~~~~l~~~d~~g~~~~~~~~~--------------~~pngi~~spdg~~-lyv~~~--- 168 (297)
T 3g4e_A 109 GR-YFAGTMAEETAPA-VLERHQGALYSLFPDHHVKKYFDQV--------------DISNGLDWSLDHKI-FYYIDS--- 168 (297)
T ss_dssp SC-EEEEEEECCSBTT-BCCTTCEEEEEECTTSCEEEEEEEE--------------SBEEEEEECTTSCE-EEEEEG---
T ss_pred CC-EEEecCCcccccc-cccCCCcEEEEEECCCCEEEEeecc--------------ccccceEEcCCCCE-EEEecC---
Confidence 98 5665433210000 0000134688888765543332221 00125889999973 665522
Q ss_pred CCcccccCCCceeEeccCCCCCCCCce---Eecc---ccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCce
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGEKPE---ILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g~~~---~l~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (616)
..+.++.++.++ .+|... .+.. .......+.+.+||..++... . . .+|+++|.+++ +..
T Consensus 169 --------~~~~i~~~~~d~-~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~-~-~--~~v~~~d~~tG--~~~ 233 (297)
T 3g4e_A 169 --------LSYSVDAFDYDL-QTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY-N-G--GRVIRLDPVTG--KRL 233 (297)
T ss_dssp --------GGTEEEEEEECT-TTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE-T-T--TEEEEECTTTC--CEE
T ss_pred --------CCCcEEEEeccC-CCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc-C-C--CEEEEEcCCCc--eEE
Confidence 123444444311 223321 1221 122345577888887555432 1 1 26999999863 222
Q ss_pred EEeec---ccccccCCCCCCCeeeC-CCCCEEEEEee
Q 007140 340 VLFDR---VFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (616)
Q Consensus 340 ~l~~~---~~~~~~~~~g~~~~~~s-~dgk~l~~~~~ 372 (616)
..... .+.. ++++ ||++.||+.+.
T Consensus 234 ~~i~~p~~~~t~---------~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDKTTS---------CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSBEEE---------EEEESGGGCEEEEEEB
T ss_pred EEEECCCCCceE---------EEEeCCCCCEEEEEcC
Confidence 11111 1222 6776 78888887764
No 130
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.2e-05 Score=84.23 Aligned_cols=115 Identities=9% Similarity=0.074 Sum_probs=71.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECC--CCceEecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~--~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (616)
.+..++|||||++|+++... + ..|.+|++. +++..+...... ....+..+.|+|||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~-------d--g~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS-------D--KSLLVFDVDKTSKNVLKLRKRFC--FSKRPNAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG-------G--TEEEEEEECSSSSSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECC-------C--CeEEEEECcCCCCceeeeeeccc--CCCCceEEEEcCCCCEEEEEeC---
Confidence 37789999999998777643 2 456666766 665443321100 0112568999999998877411
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-----ecC-CCCceeeeeE
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-----DFG-TPAVYTAVEP 182 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-----~l~-~~~~~~~~~~ 182 (616)
...++++++ +++.. .+. ....+..++|
T Consensus 170 ----------------------------------------------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 203 (450)
T 2vdu_B 170 ----------------------------------------------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHL 203 (450)
T ss_dssp ----------------------------------------------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEE
T ss_pred ----------------------------------------------CCcEEEEecCCcccccccceeeecccCceEEEEE
Confidence 134666666 44322 121 2235678999
Q ss_pred CCC---CcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 183 SPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 183 SpD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
||| +++|+....+ ..|.+||+..+
T Consensus 204 sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~ 230 (450)
T 2vdu_B 204 IKDSDGHQFIITSDRD-------------EHIKISHYPQC 230 (450)
T ss_dssp EECTTSCEEEEEEETT-------------SCEEEEEESCT
T ss_pred cCCCCCCcEEEEEcCC-------------CcEEEEECCCC
Confidence 999 8888777543 36889998754
No 131
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.59 E-value=1.1e-05 Score=80.82 Aligned_cols=224 Identities=10% Similarity=-0.005 Sum_probs=123.4
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...|.|+||++.|+|+.. ....|++++.++++.+.+.. +. .+..+.|++||+.++..
T Consensus 51 ~egp~~~~~~~~l~~~d~---------~~~~i~~~d~~~~~~~~~~~-~~-----~v~~i~~~~dg~l~v~~-------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI---------LERELHELHLASGRKTVHAL-PF-----MGSALAKISDSKQLIAS-------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEG---------GGTEEEEEETTTTEEEEEEC-SS-----CEEEEEEEETTEEEEEE--------
T ss_pred CcCCeEeCCCCEEEEEEC---------CCCEEEEEECCCCcEEEEEC-CC-----cceEEEEeCCCeEEEEE--------
Confidence 458999999999888753 24689999999887665532 22 15678899999865442
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeecCCC------CceeeeeECCC
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l~~~------~~~~~~~~SpD 185 (616)
...|+++|+ +|+.+.+... .....+.++||
T Consensus 108 -------------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 108 -------------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS 144 (326)
T ss_dssp -------------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred -------------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC
Confidence 013666777 5555544221 13457899999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecC
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (616)
|+ +++....... ......||+++ + ++.+.+... ......+.|+|||+. ||+...
T Consensus 145 G~-l~v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~-------------~~~~~~i~~s~dg~~-lyv~~~--- 198 (326)
T 2ghs_A 145 GA-LWIGTMGRKA------ETGAGSIYHVA-K-GKVTKLFAD-------------ISIPNSICFSPDGTT-GYFVDT--- 198 (326)
T ss_dssp SC-EEEEEEETTC------CTTCEEEEEEE-T-TEEEEEEEE-------------ESSEEEEEECTTSCE-EEEEET---
T ss_pred CC-EEEEeCCCcC------CCCceEEEEEe-C-CcEEEeeCC-------------CcccCCeEEcCCCCE-EEEEEC---
Confidence 98 4555432110 00134788898 4 444443220 000125789999973 555421
Q ss_pred CCcccccCCCceeEeccCCCCCCC-Cc---eEecc---ccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCc
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGE-KP---EILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g-~~---~~l~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (616)
....++.++.++ .+| +. +.+.. .......+.+.+||..++... . ...|++++.++ ...
T Consensus 199 --------~~~~I~~~d~~~-~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~-~---~~~v~~~d~~g--~~~ 263 (326)
T 2ghs_A 199 --------KVNRLMRVPLDA-RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW-G---EGAVDRYDTDG--NHI 263 (326)
T ss_dssp --------TTCEEEEEEBCT-TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE-T---TTEEEEECTTC--CEE
T ss_pred --------CCCEEEEEEccc-ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe-C---CCEEEEECCCC--CEE
Confidence 123455555410 123 21 22211 122234567888887555432 1 12699998854 111
Q ss_pred eEEe-e-cccccccCCCCCCCeeeC-CCCCEEEEEee
Q 007140 339 RVLF-D-RVFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (616)
Q Consensus 339 ~~l~-~-~~~~~~~~~~g~~~~~~s-~dgk~l~~~~~ 372 (616)
+.+. . ..+. .++++ +|++.|++...
T Consensus 264 ~~i~~~~~~~~---------~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 264 ARYEVPGKQTT---------CPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEECSCSBEE---------EEEEESTTSCEEEEEEB
T ss_pred EEEECCCCCcE---------EEEEecCCCCEEEEEec
Confidence 2221 1 1111 16776 78888777654
No 132
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.57 E-value=1.1e-05 Score=81.35 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=79.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..++|||||++||..+. ++ .+.++++.+++...+.....- ...+..+.|+|||+.|+....+
T Consensus 63 ~v~~~~~sp~g~~l~s~s~--------D~--~v~iw~~~~~~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D---- 126 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASF--------DA--TTCIWKKNQDDFECVTTLEGH--ENEVKSVAWAPSGNLLATCSRD---- 126 (345)
T ss_dssp CEEEEEECTTSSEEEEEET--------TS--CEEEEEECCC-EEEEEEECCC--SSCEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEECCCCCEEEEEEC--------CC--cEEEEEccCCCeEEEEEccCC--CCCceEEEEeCCCCEEEEEECC----
Confidence 4778999999998877653 33 445556665543322211110 1126689999999987764211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-Cee---ecC-CCCceeeeeECCC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAK---DFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~~---~l~-~~~~~~~~~~SpD 185 (616)
..|.++|+ ++ ... .+. ....+..++|+|+
T Consensus 127 ---------------------------------------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 127 ---------------------------------------------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp ---------------------------------------------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred ---------------------------------------------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 23444444 22 211 222 2235678999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCc
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
++.|+....+. .+.+|++..++...+..+... ......+.|+|||+.
T Consensus 162 ~~~l~s~s~d~-------------~i~~w~~~~~~~~~~~~~~~h----------~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 162 QELLASASYDD-------------TVKLYREEEDDWVCCATLEGH----------ESTVWSLAFDPSGQR 208 (345)
T ss_dssp SSCEEEEETTS-------------CEEEEEEETTEEEEEEEECCC----------SSCEEEEEECTTSSE
T ss_pred CCEEEEEeCCC-------------cEEEEEecCCCEEEEEEecCC----------CCceEEEEECCCCCE
Confidence 99988776432 577888765543222111100 111345889999973
No 133
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.57 E-value=7.6e-06 Score=83.85 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=66.8
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.+..++|+|++ .|+....+ ..+.+||+..++ ...+........ .......+.|+|+++
T Consensus 188 ~i~~~~~~~~~-~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~h~~-------~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNN-------------GTVQISELSTLRPLYNFESQHSMIN-------NSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCEEEECTTS-EEEEECTT-------------SEEEEEETTTTEEEEEEECCC---C-------CCCCEEEEEECSSTT
T ss_pred CceEEEECCCc-eEEEEeCC-------------CcEEEEECCCCceeEEEeccccccc-------cCCccceEEECCCCC
Confidence 45689999999 66655432 368899987554 333322000000 001124588999987
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ecc-------------ccccccceeecCCCceEEEeeecc
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK-------------LDLRFRSVSWCDDSLALVNETWYK 320 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~-------------~~~~~~~~~wspDg~~l~~~~~~~ 320 (616)
. |+ +...++ ....+.+|+. ..++... +.. ....+..+.|+||+..|+....
T Consensus 247 ~-l~-~~~~d~--------~~g~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-- 311 (397)
T 1sq9_A 247 L-LA-IAHDSN--------SFGCITLYET---EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-- 311 (397)
T ss_dssp E-EE-EEEEET--------TEEEEEEEET---TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET--
T ss_pred E-EE-EEecCC--------CCceEEEEEC---CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC--
Confidence 3 32 212110 0035666776 4334332 333 3455678899999988766542
Q ss_pred CccEEEEEEeCCC
Q 007140 321 TSQTRTWLVCPGS 333 (616)
Q Consensus 321 ~~~~~l~~~d~~~ 333 (616)
++ .|.++|+.+
T Consensus 312 dg--~i~iwd~~~ 322 (397)
T 1sq9_A 312 DG--KLRFWDVKT 322 (397)
T ss_dssp TS--EEEEEETTT
T ss_pred CC--eEEEEEcCC
Confidence 23 577788876
No 134
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.55 E-value=3e-05 Score=86.18 Aligned_cols=191 Identities=12% Similarity=0.044 Sum_probs=110.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEe-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
.+...+|||||++|+-.+. ...|.++|+.+++..+ +..+.. . +..+.|+||++.|+....+
T Consensus 432 ~v~~v~~s~~g~~l~sgs~----------Dg~v~vwd~~~~~~~~~~~~h~~-~----v~~~~~s~~~~~l~s~s~D--- 493 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSW----------DGELRLWDLAAGVSTRRFVGHTK-D----VLSVAFSLDNRQIVSASRD--- 493 (694)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-C----EEEEEECTTSSCEEEEETT---
T ss_pred cEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCcceeEEeCCCC-C----EEEEEEeCCCCEEEEEeCC---
Confidence 4778999999998876542 3578888999886543 332322 2 6688999999987764211
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecC-----CCCceeeeeECC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG-----TPAVYTAVEPSP 184 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~-----~~~~~~~~~~Sp 184 (616)
..|.++|+.+. ...+. ....+..++|||
T Consensus 494 ----------------------------------------------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 494 ----------------------------------------------RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp ----------------------------------------------SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS
T ss_pred ----------------------------------------------CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC
Confidence 12333444321 11121 122466899999
Q ss_pred CCc--EEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEE
Q 007140 185 DQK--YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (616)
Q Consensus 185 Dg~--~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~ 261 (616)
++. .|+..+.+ ..|.+||+.+.+. ..+... ......+.|+|||+. |+-.
T Consensus 528 ~~~~~~l~s~s~d-------------~~v~vwd~~~~~~~~~~~~h-------------~~~v~~v~~spdg~~-l~sg- 579 (694)
T 3dm0_A 528 NTLQPTIVSASWD-------------KTVKVWNLSNCKLRSTLAGH-------------TGYVSTVAVSPDGSL-CASG- 579 (694)
T ss_dssp CSSSCEEEEEETT-------------SCEEEEETTTCCEEEEECCC-------------SSCEEEEEECTTSSE-EEEE-
T ss_pred CCCcceEEEEeCC-------------CeEEEEECCCCcEEEEEcCC-------------CCCEEEEEEeCCCCE-EEEE-
Confidence 973 34444322 3688999876543 333221 111235889999973 2221
Q ss_pred eecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.....+.+|+. ..++.............+.|+||+..++.... . .|.+.|+.+
T Consensus 580 -----------~~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~--~i~iwd~~~ 632 (694)
T 3dm0_A 580 -----------GKDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLCAATE---H--GIKIWDLES 632 (694)
T ss_dssp -----------ETTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEEEEET---T--EEEEEETTT
T ss_pred -----------eCCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC---C--CEEEEECCC
Confidence 12235666676 43332221223344667899999987665432 1 477777776
No 135
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.55 E-value=0.00011 Score=75.75 Aligned_cols=296 Identities=13% Similarity=0.102 Sum_probs=150.7
Q ss_pred ccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCCCcc
Q 007140 39 SPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPKKTM 117 (616)
Q Consensus 39 SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~-~~~~~~~~~~ 117 (616)
.||+++ +|+.+.... ...+.|.++|+++++...-..... .. .+.+||||++|++.-.. .+
T Consensus 81 ~~~~~~-vyV~n~~~~----~~~~~VsVID~~t~~vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~~~-------- 141 (426)
T 3c75_H 81 APDARR-VYIQDPAHF----AAITQQFVIDGSTGRILGMTDGGF-----LP-HPVAAEDGSFFAQASTVFER-------- 141 (426)
T ss_dssp CCCTTE-EEEEECTTT----CSSEEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEE--------
T ss_pred CCCCCE-EEEECCCcC----CCCCeEEEEECCCCEEEEEEECCC-----CC-ceEECCCCCEEEEEeccccc--------
Confidence 378887 566653100 001799999999987543322221 14 78999999988775110 00
Q ss_pred cCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ecCCC--------CceeeeeECCCCc
Q 007140 118 VPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP--------AVYTAVEPSPDQK 187 (616)
Q Consensus 118 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~--------~~~~~~~~SpDg~ 187 (616)
...| .....|.++|. ++++. .+.-+ ..-..+.+||||+
T Consensus 142 ---------~~~G-----------------------~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk 189 (426)
T 3c75_H 142 ---------IARG-----------------------KRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK 189 (426)
T ss_dssp ---------TTEE-----------------------EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS
T ss_pred ---------cccC-----------------------CCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 0000 01357888898 66533 33211 1224789999999
Q ss_pred EEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCC-cceeecCCCceEEEEEeecC
Q 007140 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQDR 265 (616)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspdg~~~l~~~~~~d~ 265 (616)
+|++.... + ...|.++|+.+.++ ..+.- +.... . ...+.+ .+..++||+ ++++.. .
T Consensus 190 ~lyV~n~~-~----------~~~VsVID~~t~kvv~~I~v-~g~~~----~--~p~g~~~~v~~~~dG~--~~~V~~-~- 247 (426)
T 3c75_H 190 NLLFYQFS-P----------APAVGVVDLEGKTFDRMLDV-PDCYH----I--FPASPTVFYMNCRDGS--LARVDF-A- 247 (426)
T ss_dssp EEEEEECS-S----------SCEEEEEETTTTEEEEEEEC-CSEEE----E--EEEETTEEEEEETTSS--EEEEEC-C-
T ss_pred EEEEEecC-C----------CCeEEEEECCCCeEEEEEEc-CCcee----e--ccCCCcEEEEEcCCCC--EEEEEC-C-
Confidence 99988432 1 24689999987654 33321 10000 0 000011 144556665 444422 1
Q ss_pred CCcccccCCCceeEeccCCCCCCCCceE----ecc--ccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCce
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGEKPEI----LHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~----l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (616)
.++... ... .......+.+++|+..+++... . + .++.+|..+. ...
T Consensus 248 ----------------------~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~-g--~V~ViD~~~~--~~~ 299 (426)
T 3c75_H 248 ----------------------DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-T-G--KIFQADLTAE--GAT 299 (426)
T ss_dssp ----------------------TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-T-S--EEEEEEECSS--CEE
T ss_pred ----------------------CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-C-C--cEEEEeccCC--ceE
Confidence 111110 000 0111234568999887666542 1 2 7999998762 222
Q ss_pred EEeecccc-----cccCCC-CCCCeeeCCCCCEEEEEeeecCC-----cccEEEEEecCCCCCCCcceeEeeecCCCcee
Q 007140 340 VLFDRVFE-----NVYSDP-GSPMMTRTSTGTNVIAKIKKEND-----EQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 408 (616)
Q Consensus 340 ~l~~~~~~-----~~~~~~-g~~~~~~s~dgk~l~~~~~~~~~-----~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~ 408 (616)
.+....+. ..-..| +...+.+++||+++|+...+.+. ....+ ..+|+++.+..
T Consensus 300 v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V----------------sVID~~T~kvv 363 (426)
T 3c75_H 300 FRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV----------------VVLNAETGERI 363 (426)
T ss_dssp ECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE----------------EEEETTTCCEE
T ss_pred EeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE----------------EEEECCCCeEE
Confidence 22111000 000001 12236788899988887542110 01222 35788887655
Q ss_pred eeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCCCcee
Q 007140 409 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (616)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~~~~~ 465 (616)
.-+... ..... ..+++|++.++|.... ....|.++|+++++..
T Consensus 364 ~~I~vg-----~~P~g-------ia~spDg~~~lyv~n~--~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 364 NKIELG-----HEIDS-------INVSQDAEPLLYALSA--GTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEEEE-----EEECE-------EEECCSSSCEEEEEET--TTTEEEEEETTTCCEE
T ss_pred EEEECC-----CCcCe-------EEEccCCCEEEEEEcC--CCCeEEEEECCCCCEE
Confidence 433221 11222 3578899834444331 2477999999887753
No 136
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.55 E-value=2.9e-05 Score=80.84 Aligned_cols=124 Identities=7% Similarity=0.103 Sum_probs=63.9
Q ss_pred ceeeeeECCCC-cEEEEEeccCCCcccccCcccCccEEEEeCCCceE-----EEecCCCCCCCCCccccCccCCCCccee
Q 007140 176 VYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-----RELCDLPPAEDIPVCYNSVREGMRSISW 249 (616)
Q Consensus 176 ~~~~~~~SpDg-~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~w 249 (616)
.+..++|+|+| +.|+....+ ..|.+||+..++. +.+.......... .+.........+.|
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~ 293 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDPSNRS-FFSEIISSISDVKF 293 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC-----CC-HHHHHTTCEEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCccccc-cccccCceEEEEEE
Confidence 46789999999 777766543 2688999875542 3332210000000 00000002345889
Q ss_pred ecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCC-CCce-Eecccccc---------------ccceeecCCCce
Q 007140 250 RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPE-ILHKLDLR---------------FRSVSWCDDSLA 312 (616)
Q Consensus 250 spdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-~l~~~~~~---------------~~~~~wspDg~~ 312 (616)
+|||+. |+-. .. ..+.+|+. .. ++.. .+...... ...+.|+||+..
T Consensus 294 s~~g~~-l~~~------------~~-~~v~iwd~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~ 356 (447)
T 3dw8_B 294 SHSGRY-MMTR------------DY-LSVKVWDL---NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV 356 (447)
T ss_dssp CTTSSE-EEEE------------ES-SEEEEEET---TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE
T ss_pred CCCCCE-EEEe------------eC-CeEEEEeC---CCCccccceeeccccccccccccccccccccceEEEECCCCCE
Confidence 999983 3221 12 45666665 32 2222 22211110 112799999998
Q ss_pred EEEeeeccCccEEEEEEeCCCC
Q 007140 313 LVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 313 l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
|+.... ++ .|+++|+.++
T Consensus 357 l~s~s~--dg--~v~iwd~~~~ 374 (447)
T 3dw8_B 357 VMTGSY--NN--FFRMFDRNTK 374 (447)
T ss_dssp EEEECS--TT--EEEEEETTTC
T ss_pred EEEecc--CC--EEEEEEcCCC
Confidence 765442 23 5777788763
No 137
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=98.55 E-value=2.3e-07 Score=94.54 Aligned_cols=111 Identities=19% Similarity=0.164 Sum_probs=78.3
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
...+.+++++.||.+++++++.|.+ .+.+ +.|+||+.++.. +....| .....+.|+++||.|+
T Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~--~~p~vv~~hG~~-----------~~~~~~---~~~~~~~l~~~G~~v~ 128 (367)
T 2hdw_A 66 VEHRKVTFANRYGITLAADLYLPKN-RGGD--RLPAIVIGGPFG-----------AVKEQS---SGLYAQTMAERGFVTL 128 (367)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEESS-CCSS--CEEEEEEECCTT-----------CCTTSH---HHHHHHHHHHTTCEEE
T ss_pred ceeEEEEEecCCCCEEEEEEEeCCC-CCCC--CCCEEEEECCCC-----------Ccchhh---HHHHHHHHHHCCCEEE
Confidence 3778899999999999999999988 3333 348888883310 000112 1024678999999999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
. |+| |...-..............+|+.+++++|.+++.+|++||++.+
T Consensus 129 ~~d~~-g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G 177 (367)
T 2hdw_A 129 AFDPS-YTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIG 177 (367)
T ss_dssp EECCT-TSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred EECCC-CcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEE
Confidence 9 999 74222111111222456889999999999999989999999876
No 138
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.54 E-value=1.7e-06 Score=88.22 Aligned_cols=182 Identities=10% Similarity=0.161 Sum_probs=100.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc----eEecccCCCccccccccceEEecCCcEEEEEecC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~ 107 (616)
.+..+.|||||++|+.... ...|.++++.+++ ...+..... .+..+.|+||++.|+....+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~----------d~~v~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQ----------DRNAYVYEKRPDGTWKQTLVLLRLNR-----AATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp CEEEEEECTTTCCEEEEET----------TSSEEEC------CCCCEEECCCCSS-----CEEEEECCTTSSCCEEEESS
T ss_pred eEEEEEEeCCCCEEEEEeC----------CCeEEEEEcCCCCceeeeeEecccCC-----ceEEEEECCCCCEEEEEecC
Confidence 5788999999998887653 2457777887766 233322222 26688999999987774211
Q ss_pred CCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC----eeecC--CCCceeee
Q 007140 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFG--TPAVYTAV 180 (616)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~----~~~l~--~~~~~~~~ 180 (616)
..|.++|+ +++ .+.+. ....+..+
T Consensus 122 -------------------------------------------------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 122 -------------------------------------------------RVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp -------------------------------------------------SCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred -------------------------------------------------CeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 23444444 222 23343 23456789
Q ss_pred eECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce----------------EEEecCCCCCCCCCccccCccCCC
Q 007140 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----------------VRELCDLPPAEDIPVCYNSVREGM 244 (616)
Q Consensus 181 ~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----------------~~~l~~~~~~~~~~~~~~~~~~~~ 244 (616)
+|+||++.|+....+ ..+.+||+..+. .+.+..+ ......
T Consensus 153 ~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v 208 (377)
T 3dwl_C 153 DWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-----------PSGGWV 208 (377)
T ss_dssp EECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-----------CCSSSE
T ss_pred EEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccccccchhhhhhcc-----------cCCceE
Confidence 999999998887643 257788874221 1111111 001112
Q ss_pred CcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-----eEeccccccccceeecCCCceEEEee
Q 007140 245 RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDSLALVNET 317 (616)
Q Consensus 245 ~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (616)
..+.|+|||+. |+.. .....+.+|+. ..++. ..+......+..+.|+|||..|+...
T Consensus 209 ~~~~~sp~~~~-l~~~------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 209 HAVGFSPSGNA-LAYA------------GHDSSVTIAYP---SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEECTTSSC-EEEE------------ETTTEEC-CEE---CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEECCCCCE-EEEE------------eCCCcEEEEEC---CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 35789999983 3332 11235556665 43332 22333444567889999998776543
No 139
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=98.54 E-value=2.4e-07 Score=95.16 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=85.8
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCc---cCC--C-CCchHHHHhh
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE---FSG--M-TPTSSLIFLA 553 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~---~~~--~-~~~~~q~la~ 553 (616)
..+.++|++. ||.++++++++|.++++++++ |+||+.|++.. ++..+. ... . .+....+.+.
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~--Pvvv~lHG~g~---------~~~~~~~~~~~~~g~~~~~~~~~~~~ 211 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDRKY--PLVVFLHGAGE---------RGTDNYLQVAGNRGAVVWAQPRYQVV 211 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTSCE--EEEEEECCGGG---------CSSSSSHHHHSSTTTTGGGSHHHHTT
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCCCc--cEEEEECCCCC---------CCCchhhhhhccccceeecCcccccc
Confidence 5677899999 999999999999998877655 88888854311 000000 000 0 1122345667
Q ss_pred CCeEEEE-CCCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 554 RRFAVLA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 554 ~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
+|++|+. |+| |+.++|..|.. ...+..++.|+++++++++++.-+|++||+|.+-
T Consensus 212 ~~~~vv~pd~~-g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~ 270 (380)
T 3doh_A 212 HPCFVLAPQCP-PNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGL 270 (380)
T ss_dssp SCCEEEEECCC-TTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEE
T ss_pred CCEEEEEecCC-CCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEE
Confidence 8899999 999 99999988874 3334568999999999999986699999999863
No 140
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.54 E-value=0.00012 Score=78.63 Aligned_cols=256 Identities=11% Similarity=0.043 Sum_probs=126.9
Q ss_pred CCCCCcccceEEc----cCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcccc-------ccccceEEe
Q 007140 27 YPDGAKINFVSWS----PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLN-------AVFGSFVWV 95 (616)
Q Consensus 27 ~~~~~~~~~~~~S----PDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~-------~~~~~~~ws 95 (616)
++.+.......|| |||++++.... ...+|.++|.++.+..+.......... ..+..+..|
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~---------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAY---------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEE---------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEc---------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 3344456688999 79998655542 246888999988876544322110000 012234445
Q ss_pred cCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-C---eeec
Q 007140 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-T---AKDF 171 (616)
Q Consensus 96 pdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~---~~~l 171 (616)
+++..+++... ...+|+++|... + +..+
T Consensus 307 ~~~~~~vv~~~------------------------------------------------~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 307 HYRPEFIVNVK------------------------------------------------ETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp SSSSEEEEEET------------------------------------------------TTTEEEEEETTCSSEEEEEEE
T ss_pred CCCCEEEEEec------------------------------------------------CCCeEEEEecCCCccceeeee
Confidence 55444333210 135777787732 2 2233
Q ss_pred CCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCccee-e
Q 007140 172 GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISW-R 250 (616)
Q Consensus 172 ~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~w-s 250 (616)
..+.....+.|+|||+++++.... ...|.++|+.+++........ . ..|- + .+...| .
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~~i~vg-g-~~Ph------p-g~g~~~~~ 397 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVAIEDTG-G-QTPH------P-GRGANFVH 397 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECS-S-SSBC------C-TTCEEEEE
T ss_pred eccccccCceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEEEEecc-C-cCCC------C-ccceeeEC
Confidence 334455678999999999888653 247899999877544332210 0 0110 1 123344 6
Q ss_pred cCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCC-----CCceEeccccccccceeecCCCceEEEeeeccC---c
Q 007140 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-----EKPEILHKLDLRFRSVSWCDDSLALVNETWYKT---S 322 (616)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~---~ 322 (616)
|++. .++.+... ..+.+.+++.++-.. ...+.+.........+..+||++.++.+..... .
T Consensus 398 p~~g-~v~~t~~~----------g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~ 466 (567)
T 1qks_A 398 PTFG-PVWATSHM----------GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEI 466 (567)
T ss_dssp TTTE-EEEEEEBS----------SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHH
T ss_pred CCCC-cEEEeCCC----------CCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCccc
Confidence 6654 24333211 123455556522000 011223222222234667899987655431111 1
Q ss_pred cEEEEEEeCCCCC--C-C-c-eEEeecccccccCCCCC--CCeeeCCCCCEEEEEee
Q 007140 323 QTRTWLVCPGSKD--V-A-P-RVLFDRVFENVYSDPGS--PMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 323 ~~~l~~~d~~~~~--~-~-~-~~l~~~~~~~~~~~~g~--~~~~~s~dgk~l~~~~~ 372 (616)
...|.++|+++.+ + . . +.+.-..+.. ....+. .-+.+++||++++++..
T Consensus 467 ~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~s~~ 522 (567)
T 1qks_A 467 SGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG-ITEGQPRVVQGEFNKDGTEVWFSVW 522 (567)
T ss_dssp HTCEEEEEGGGCCCSSSCCCEEEECHHHHHT-CCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred CceEEEEECCcccccccCCCcEEeccccccc-cCCCCcceEeeeECCCCCEEEEEee
Confidence 2368889887630 0 1 1 2231000000 000010 12788999999998854
No 141
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.53 E-value=3.8e-05 Score=79.61 Aligned_cols=251 Identities=12% Similarity=0.094 Sum_probs=135.0
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCC-cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~-~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (616)
.|+|=++.. |+..++..+.... .+..++|||||++||.-.. ...|.++++.+++..+........
T Consensus 126 tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~----------Dg~v~iWd~~~~~~~~~~~~h~~~ 191 (420)
T 4gga_A 126 SVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHSAR 191 (420)
T ss_dssp EEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----------TSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC----------CCeEEEEEcCCCcEEEEEeCCCCc
Confidence 366667654 7766654343322 4789999999999876542 256777799888754432221111
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC
Q 007140 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (616)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~ 164 (616)
+..+ +.+++.|+.... ...+++++.
T Consensus 192 ----v~~~--s~~~~~l~sgs~-------------------------------------------------d~~i~~~d~ 216 (420)
T 4gga_A 192 ----VGSL--SWNSYILSSGSR-------------------------------------------------SGHIHHHDV 216 (420)
T ss_dssp ----EEEE--EEETTEEEEEET-------------------------------------------------TSEEEEEET
T ss_pred ----eEEE--eeCCCEEEEEeC-------------------------------------------------CCceeEeee
Confidence 3333 445665554311 123334444
Q ss_pred C-C--CeeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE--EecCCCCCCCCCcccc
Q 007140 165 D-G--TAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCYN 238 (616)
Q Consensus 165 ~-g--~~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~ 238 (616)
. . ....+. ....+..+.|+|+|+.++....+. .+.+++...++.. .+....
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-------------~v~i~~~~~~~~~~~~~~~~~---------- 273 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPLQTFT---------- 273 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCCSSCSCCSEEEC----------
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeeccc-------------cceEEeeccccccceeeeeec----------
Confidence 2 1 122222 223456889999999988776532 5778887643211 110000
Q ss_pred CccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeee
Q 007140 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW 318 (616)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (616)
........+.|+|++...++... . .....+.+|+. ..++...............|++++..++....
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~--g--------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGG--G--------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEE--C--------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred ccCCceeeeeeCCCcccEEEEEe--e--------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEe
Confidence 00111235789998876333221 0 12245667776 54444443334445667889999887665443
Q ss_pred ccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
..++ .|.++|+.++ ++...+..... .+ ..++|+|||+.|+...
T Consensus 341 ~~d~--~I~iwd~~~~--~~v~~l~gH~~-~V-----~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 341 FAQN--QLVIWKYPTM--AKVAELKGHTS-RV-----LSLTMSPDGATVASAA 383 (420)
T ss_dssp TTTC--CEEEEETTTC--CEEEEECCCSS-CE-----EEEEECTTSSCEEEEE
T ss_pred cCCC--EEEEEECCCC--cEEEEEcCCCC-CE-----EEEEEcCCCCEEEEEe
Confidence 2233 4777787763 22222221111 11 1288999999876543
No 142
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.52 E-value=0.0004 Score=74.63 Aligned_cols=307 Identities=9% Similarity=-0.007 Sum_probs=153.5
Q ss_pred CCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECC--CCceE-ecccCCCccccccccceEEe----cCCcE
Q 007140 28 PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAK-PLFESPDICLNAVFGSFVWV----NNSTL 100 (616)
Q Consensus 28 ~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~--~g~~~-~lt~~~~~~~~~~~~~~~ws----pdg~~ 100 (616)
+.+.....+.+||||++++ +.+. ...|.++|+. +++.. .+. ... ....+.+| |||++
T Consensus 194 ~~g~~p~~v~~SpDGr~ly-v~~~---------dg~V~viD~~~~t~~~v~~i~-~G~-----~P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 194 DTGYAVHISRLSASGRYLF-VIGR---------DGKVNMIDLWMKEPTTVAEIK-IGS-----EARSIETSKMEGWEDKY 257 (567)
T ss_dssp ECSSCEEEEEECTTSCEEE-EEET---------TSEEEEEETTSSSCCEEEEEE-CCS-----EEEEEEECCSTTCTTTE
T ss_pred eCCCCccceEECCCCCEEE-EEcC---------CCeEEEEECCCCCCcEeEEEe-cCC-----CCceeEEccccCCCCCE
Confidence 3343456899999999855 4432 2579999996 55432 221 111 13478899 69998
Q ss_pred EEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeee-cCC-----
Q 007140 101 LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-FGT----- 173 (616)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~-l~~----- 173 (616)
|+.... ...++.++|. +.++.+ +..
T Consensus 258 l~v~n~------------------------------------------------~~~~v~ViD~~t~~~~~~i~~~~~~~ 289 (567)
T 1qks_A 258 AIAGAY------------------------------------------------WPPQYVIMDGETLEPKKIQSTRGMTY 289 (567)
T ss_dssp EEEEEE------------------------------------------------ETTEEEEEETTTCCEEEEEECCEECT
T ss_pred EEEEEc------------------------------------------------cCCeEEEEECCCCcEEEEEecccccc
Confidence 877511 1234555565 333222 111
Q ss_pred -------CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCc
Q 007140 174 -------PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRS 246 (616)
Q Consensus 174 -------~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 246 (616)
...+..+..|+++..+++.... ...|+++|....+...++.++.. .....
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~v~~i~~~-----------~~~~d 346 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLKTTEISAE-----------RFLHD 346 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEEEEEEECC-----------SSEEE
T ss_pred ccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCccceeeeeecc-----------ccccC
Confidence 1123467789988766665432 34789999865432223221110 00124
Q ss_pred ceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc-c---ccccceee-cCCCceEEEeeeccC
Q 007140 247 ISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-D---LRFRSVSW-CDDSLALVNETWYKT 321 (616)
Q Consensus 247 ~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~-~---~~~~~~~w-spDg~~l~~~~~~~~ 321 (616)
..|+|||++ + ++.. ...+.+.++|. ++++...+... . .....+.| .|++..++.....
T Consensus 347 ~~~~pdgr~-~-~va~----------~~sn~V~ViD~---~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~-- 409 (567)
T 1qks_A 347 GGLDGSHRY-F-ITAA----------NARNKLVVIDT---KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM-- 409 (567)
T ss_dssp EEECTTSCE-E-EEEE----------GGGTEEEEEET---TTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS--
T ss_pred ceECCCCCE-E-EEEe----------CCCCeEEEEEC---CCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC--
Confidence 679999984 3 3322 22356666787 55544332222 1 11123444 6775544332211
Q ss_pred ccEEEEEEeCCCCCCC---ceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCC--cccEEEEEecCCCCCCCcce
Q 007140 322 SQTRTWLVCPGSKDVA---PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND--EQIYILLNGRGFTPEGNIPF 396 (616)
Q Consensus 322 ~~~~l~~~d~~~~~~~---~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~--~~~~l~~~~~g~~~~~~~~~ 396 (616)
+...|.+++.++.+.. -+.+-..... ..+...+..+|||+++++......+ ....+.
T Consensus 410 g~~~Vsvid~~~~~~~~~~~kvv~~i~~~----g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~-------------- 471 (567)
T 1qks_A 410 GDDSVALIGTDPEGHPDNAWKILDSFPAL----GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVA-------------- 471 (567)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECS----CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEE--------------
T ss_pred CCCeEEEecCCCCCCccccCEEEEEEecC----CCCCEEEEeCCCCCeEEEecCCCCCcccCceEE--------------
Confidence 1126888888762110 1222110110 0122235678999998876521100 011222
Q ss_pred eEeeecCCC-----ce--eeeeecC---CcccceeeEEeecCCCcccccccCCEEEEEeec-CCCCceEEEEeCCCCcee
Q 007140 397 LDLFDINTG-----SK--ERIWESN---REKYFETAVALVFGQGEEDINLNQLKILTSKES-KTEITQYHILSWPLKKSS 465 (616)
Q Consensus 397 l~~~d~~~g-----~~--~~l~~~~---~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss-~~~p~~l~~~~~~~~~~~ 465 (616)
.+|+++. .. +.|-... .......+.. ..|+++|++++++..+ ......|.++|.+++++.
T Consensus 472 --v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 472 --VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQ-------GEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 542 (567)
T ss_dssp --EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEE-------EEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred --EEECCcccccccCCCcEEeccccccccCCCCcceEe-------eeECCCCCEEEEEeecCCCCCCcEEEEECCCceEE
Confidence 2444433 11 2221000 0000012222 3588999988877533 335688999998887654
No 143
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.51 E-value=6.7e-05 Score=74.10 Aligned_cols=196 Identities=11% Similarity=0.112 Sum_probs=112.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|+|+.|+.... ...|.++|+.+++........... +..+.|+|+++.|+....
T Consensus 109 ~v~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~----- 169 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSF----------DESVRIWDVKTGKCLKTLPAHSDP----VSAVHFNRDGSLIVSSSY----- 169 (312)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred CEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCEEEEEecCCCCc----EEEEEEcCCCCEEEEEeC-----
Confidence 4678899999998776542 356888899888754433222212 568899999997766421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCC--CCceeeeeECCCCc
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT--PAVYTAVEPSPDQK 187 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~--~~~~~~~~~SpDg~ 187 (616)
...|.++|+ +++ ...+.. ...+..++|+|+|+
T Consensus 170 --------------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
T 4ery_A 170 --------------------------------------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 205 (312)
T ss_dssp --------------------------------------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS
T ss_pred --------------------------------------------CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC
Confidence 124556666 443 333322 22456789999999
Q ss_pred EEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceee-cCCCceEEEEEeecC
Q 007140 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDR 265 (616)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws-pdg~~~l~~~~~~d~ 265 (616)
+|+....+ ..+.+||+..++ .+.+...... .......++ +++. ++..
T Consensus 206 ~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~l~s----- 254 (312)
T 4ery_A 206 YILAATLD-------------NTLKLWDYSKGKCLKTYTGHKNE-----------KYCIFANFSVTGGK--WIVS----- 254 (312)
T ss_dssp EEEEEETT-------------TEEEEEETTTTEEEEEECSSCCS-----------SSCCCEEEECSSSC--EEEE-----
T ss_pred EEEEEcCC-------------CeEEEEECCCCcEEEEEEecCCc-----------eEEEEEEEEeCCCc--EEEE-----
Confidence 99887643 368899987654 3333221100 000122344 3343 2111
Q ss_pred CCcccccCCCceeEeccCCCCCCCCceE-eccccccccceeecCCCceEEEeeeccCccEEEEEEe
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (616)
......+.+|+. ..++... +...........|+|++..++......++..++|..|
T Consensus 255 ------g~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 255 ------GSEDNLVYIWNL---QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ------CCTTSCEEEEET---TTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ------ECCCCEEEEEEC---CCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 122345667776 4444332 3333445667899999987765543233555677643
No 144
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.51 E-value=9.3e-06 Score=82.61 Aligned_cols=92 Identities=9% Similarity=-0.027 Sum_probs=44.2
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeE-EEEEeeccccccCC----CceeEEEEECC-CCceE-eccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRI-AFSVRVDEEDNVSS----CKLRVWIADAE-TGEAK-PLFE 79 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~i-af~~~~~~~~~~~~----~~~~l~v~~~~-~g~~~-~lt~ 79 (616)
|.+.++.. +|+..++...+.......+.|||||++| +|+.+.+.-....+ ....+.+++++ .|+.. .+..
T Consensus 62 v~~~~~~~---~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~ 138 (365)
T 1jof_A 62 WSSFAVKS---PTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN 138 (365)
T ss_dssp EEEEEEEE---TTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE
T ss_pred EEEEEECC---CCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee
Confidence 44555531 2655544322211125568999999974 45543000000000 12345566665 35543 2221
Q ss_pred C--CCccccccccceEEecCCcEEEEE
Q 007140 80 S--PDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 80 ~--~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
. ... .....+.|||||++|++.
T Consensus 139 ~~~~~~---~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 139 YEYQEN---TGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp EECCTT---CCEEEEEECTTSSEEEEE
T ss_pred EEeCCC---CcceEEEECCCCCEEEEE
Confidence 0 010 114578999999987654
No 145
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.49 E-value=0.00024 Score=72.58 Aligned_cols=199 Identities=13% Similarity=0.116 Sum_probs=108.3
Q ss_pred cccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCC---------ccccccccceEEec-CCcE
Q 007140 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD---------ICLNAVFGSFVWVN-NSTL 100 (616)
Q Consensus 32 ~~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~---------~~~~~~~~~~~wsp-dg~~ 100 (616)
.+..+.||| ||+.|+.... ...|.++++.+++......... ..-...+..+.|+| +++.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGS----------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp CEEEEEECTTTCCEEEEEET----------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred cEEEEEEecCCCCEEEEEcC----------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 588999999 9998877653 2567778988765433221000 00011256788998 5555
Q ss_pred EEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecCCCCcee
Q 007140 101 LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYT 178 (616)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~~~~~~ 178 (616)
|+... ....|.++|+ +++. ..+.......
T Consensus 115 l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (408)
T 4a11_B 115 FTSSS-------------------------------------------------FDKTLKVWDTNTLQTADVFNFEETVY 145 (408)
T ss_dssp EEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred EEEEe-------------------------------------------------CCCeEEEeeCCCCccceeccCCCcee
Confidence 55431 0235666777 4433 2333333455
Q ss_pred eeeECCCC---cEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 179 AVEPSPDQ---KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 179 ~~~~SpDg---~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.+.|+|.+ ..|+..... ..+.+||+..++ ...+... ......+.|+|+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 146 SHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGH-------------RQEILAVSWSPRYD 199 (408)
T ss_dssp EEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEECCC-------------CSCEEEEEECSSCT
T ss_pred eeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeeecCC-------------CCcEEEEEECCCCC
Confidence 77888754 466666432 368899987543 3333321 01123588999987
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCC--ceEe---------------ccccccccceeecCCCceEEEee
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK--PEIL---------------HKLDLRFRSVSWCDDSLALVNET 317 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~l---------------~~~~~~~~~~~wspDg~~l~~~~ 317 (616)
. ++.....+ ..+.+|+. ..+. ...+ ......+..+.|+||+..|+...
T Consensus 200 ~-ll~~~~~d-----------g~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 200 Y-ILATASAD-----------SRVKLWDV---RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp T-EEEEEETT-----------SCEEEEET---TCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred c-EEEEEcCC-----------CcEEEEEC---CCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 5 32332211 23333343 1111 1111 12233456789999998776654
Q ss_pred eccCccEEEEEEeCCCC
Q 007140 318 WYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 318 ~~~~~~~~l~~~d~~~~ 334 (616)
. ++ .|.++|+.++
T Consensus 265 ~--dg--~i~vwd~~~~ 277 (408)
T 4a11_B 265 T--DN--RMRLWNSSNG 277 (408)
T ss_dssp T--TS--CEEEEETTTC
T ss_pred C--CC--eEEEEECCCC
Confidence 2 23 4777787763
No 146
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.49 E-value=5.3e-05 Score=77.26 Aligned_cols=205 Identities=10% Similarity=-0.020 Sum_probs=115.2
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCc-EEEEEecCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNST-LLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~-~l~~~~~~~~~ 110 (616)
.+....|||||+.|+.... ...|.++++.+.....+..... . +..+.|+|+++ .|+....
T Consensus 165 ~v~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~h~~-~----v~~~~~~~~~~~~l~s~~~---- 225 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDS----------TGRLLLLGLDGHEIFKEKLHKA-K----VTHAEFNPRCDWLMATSSV---- 225 (383)
T ss_dssp CEEEEEEETTTTEEEEEET----------TSEEEEEETTSCEEEEEECSSS-C----EEEEEECSSCTTEEEEEET----
T ss_pred CeEEEEECCCCCEEEEECC----------CCCEEEEECCCCEEEEeccCCC-c----EEEEEECCCCCCEEEEEeC----
Confidence 4778999999998776542 3688888986544445543332 2 66899999999 5544311
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-C----CCe-eecCCCCceeeeeECC
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D----GTA-KDFGTPAVYTAVEPSP 184 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~----g~~-~~l~~~~~~~~~~~Sp 184 (616)
...|.++|+ + +.. ..+.....+..++|+|
T Consensus 226 ---------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 226 ---------------------------------------------DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNP 260 (383)
T ss_dssp ---------------------------------------------TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECT
T ss_pred ---------------------------------------------CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcC
Confidence 124455555 3 222 2233344567899999
Q ss_pred -CCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEe
Q 007140 185 -DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (616)
Q Consensus 185 -Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (616)
||+.|+....+ ..|.+||+..+ ....+........ . ........|+|++.. ..+..
T Consensus 261 ~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~p~~~~--~~~~~ 318 (383)
T 3ei3_B 261 TDSTKLLTTDQR-------------NEIRVYSSYDWSKPDQIIIHPHRQF------Q-HLTPIKATWHPMYDL--IVAGR 318 (383)
T ss_dssp TTSCEEEEEESS-------------SEEEEEETTBTTSCSEEEECCBCCC------T-TSCCCCCEECSSSSE--EEEEC
T ss_pred CCCCEEEEEcCC-------------CcEEEEECCCCcccccccccccccc------c-cccceEEeccCCCCc--eEEEe
Confidence 99999877643 36889998643 3333322110000 0 001113578888763 22322
Q ss_pred ecCCCcccccCCCceeEeccCCCCCCCCce-Eecc--ccccccceeecCCCceEEEeeeccCccEEEEEEeCC
Q 007140 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (616)
...+.. .......+.+|+. ..++.. .+.. .......+.|+||+..|+... + + .|.+++++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~---~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s--d-~--~i~iw~~~ 381 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDA---NSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM--G-F--NILIWNRE 381 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEET---TTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE--T-T--EEEEEECC
T ss_pred cCCccc--ccCCCCeEEEEec---CCCceeeeecCCCCCceEEEEEEecCccEEEEec--C-C--cEEEEecC
Confidence 222211 2234456777887 545543 3432 223445569999999876654 2 3 45555554
No 147
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.49 E-value=3.2e-05 Score=78.25 Aligned_cols=225 Identities=15% Similarity=0.145 Sum_probs=118.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC--ceE-ecccCCCccccccccceEEecC--CcEEEEEec
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--EAK-PLFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g--~~~-~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~ 106 (616)
.+..+.|||||++||.... + ..|.++++.++ +.. .+..+.. .+..+.|+++ ++.|+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSS--------D--KTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CEEEEEECSSSSEEEEEET--------T--SCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEEC--------C--CcEEEEecCCCcceeeeEecCCCC-----cEEEEEeCCCCCCCEEEEecc
Confidence 4788999999999886642 3 34555566533 332 2222221 2568899977 777666421
Q ss_pred CCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC---eeecC-CCCceeeee
Q 007140 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFG-TPAVYTAVE 181 (616)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~---~~~l~-~~~~~~~~~ 181 (616)
...|.++|+ +++ ...+. ....+..++
T Consensus 78 -------------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 78 -------------------------------------------------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp -------------------------------------------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred -------------------------------------------------CCEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 123455555 343 22222 233567899
Q ss_pred ECCC--CcEEEEEeccCCCcccccCcccCccEEEEeCCCce---EEEecCCCCCCCCCccccCccCCCCcceeec-----
Q 007140 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---VRELCDLPPAEDIPVCYNSVREGMRSISWRA----- 251 (616)
Q Consensus 182 ~SpD--g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp----- 251 (616)
|+|+ ++.|+....+ ..+.+||+..+. ...+... ......+.|+|
T Consensus 109 ~~~~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDAH-------------AIGVNSASWAPATIEE 162 (379)
T ss_dssp ECCGGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEEEECC-------------TTCEEEEEECCCC---
T ss_pred eCCCCCCCEEEEecCC-------------CcEEEEecCCCCceeeEEecCC-------------CCceEEEEEcCccccc
Confidence 9999 8888877643 368889887542 1122110 01123578888
Q ss_pred --------CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-----EeccccccccceeecCC---CceEEE
Q 007140 252 --------DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-----ILHKLDLRFRSVSWCDD---SLALVN 315 (616)
Q Consensus 252 --------dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~l~~~~~~~~~~~wspD---g~~l~~ 315 (616)
|+.. |+.. . ....+.+|+. ..+... .+......+..+.|+|| +..|+.
T Consensus 163 ~~~~~~~~~~~~-l~~~-~-----------~dg~i~i~d~---~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 163 DGEHNGTKESRK-FVTG-G-----------ADNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp -------CTTCE-EEEE-E-----------TTSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cccccCCCCCCE-EEEE-e-----------CCCeEEEEEe---cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 4552 2221 1 1234555554 322221 12223445678999999 666665
Q ss_pred eeeccCccEEEEEEeCCCCCCC-ceEEeec-ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 316 ETWYKTSQTRTWLVCPGSKDVA-PRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 316 ~~~~~~~~~~l~~~d~~~~~~~-~~~l~~~-~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
... ++..+|| |+.++... ...+... ...... ..++|+|+|+.|+...
T Consensus 227 ~~~--dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 227 VSQ--DRTCIIW--TQDNEQGPWKKTLLKEEKFPDVL-----WRASWSLSGNVLALSG 275 (379)
T ss_dssp EET--TSCEEEE--EESSTTSCCEEEESSSSCCSSCE-----EEEEECSSSCCEEEEE
T ss_pred EeC--CCEEEEE--eCCCCCccceeeeeccccCCCcE-----EEEEEcCCCCEEEEec
Confidence 442 2433454 55442111 1122111 011101 1279999999877655
No 148
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.47 E-value=0.00016 Score=71.02 Aligned_cols=144 Identities=6% Similarity=-0.074 Sum_probs=78.8
Q ss_pred ceEEEEeC-CCCeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCc
Q 007140 157 AQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (616)
Q Consensus 157 ~~l~~~d~-~g~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (616)
.+|+++|+ +++...+..+.....++++|||+ |++.. . ..|+++|.++++.+.+...+.. .+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~-------------~~l~~~d~~~g~~~~~~~~~~~--~~- 96 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G-------------TKFCALNWKEQSAVVLATVDND--KK- 96 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T-------------TEEEEEETTTTEEEEEEECCTT--CS-
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C-------------CeEEEEECCCCcEEEEEecCCC--CC-
Confidence 46788888 44554444444566889999999 44443 1 2588999988877666542110 00
Q ss_pred cccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEE
Q 007140 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (616)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~ 315 (616)
......+.++|||+ +++..................++.++. + ++...+.........+.|+||++.++.
T Consensus 97 -----~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~---~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 97 -----NNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFP---D-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp -----SEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECT---T-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred -----CCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEEC---C-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 00122477889987 544322111000000112245776665 3 344444333233456899999986544
Q ss_pred eeeccCccEEEEEEeCC
Q 007140 316 ETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 316 ~~~~~~~~~~l~~~d~~ 332 (616)
.... ..+|++++++
T Consensus 166 ~~~~---~~~i~~~~~d 179 (297)
T 3g4e_A 166 IDSL---SYSVDAFDYD 179 (297)
T ss_dssp EEGG---GTEEEEEEEC
T ss_pred ecCC---CCcEEEEecc
Confidence 3322 2268888764
No 149
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.47 E-value=6.2e-06 Score=87.07 Aligned_cols=190 Identities=13% Similarity=0.044 Sum_probs=107.9
Q ss_pred CCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc-cccccceEEecCCcEEEEEecCC
Q 007140 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL-NAVFGSFVWVNNSTLLIFTIPSS 108 (616)
Q Consensus 30 ~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~-~~~~~~~~wspdg~~l~~~~~~~ 108 (616)
...+...+|||||++||-.+. + ..+.+++.++ ....+. + +..+ ...+..++|||||+.|+....+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~--------d--g~V~iwd~~~-~l~~l~-~-~~~~~~~sv~svafSPDG~~LAsgs~D- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN--------N--GNVSVFKDNK-MLTNLD-S-KGNLSSRTYHCFEWNPIESSIVVGNED- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET--------T--SCEEEEETTE-EEEECC-C-SSCSTTTCEEEEEECSSSSCEEEEETT-
T ss_pred CCcEEEEEECCCCCEEEEEeC--------C--CcEEEEeCCc-eeeecc-C-CCccccccEEEEEEcCCCCEEEEEcCC-
Confidence 346889999999999998764 3 3455667543 223332 1 2110 1125689999999998885211
Q ss_pred CCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe--------eecC-----CC
Q 007140 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--------KDFG-----TP 174 (616)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~--------~~l~-----~~ 174 (616)
..|-++|+ ++.. ..+. +.
T Consensus 151 ------------------------------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 151 ------------------------------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp ------------------------------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred ------------------------------------------------CEEEEEECCCCccccccceeeeeeeccccccc
Confidence 23444455 2221 2221 11
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE----EecCCCCCCCCCccccCccCCCCcceee
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR----ELCDLPPAEDIPVCYNSVREGMRSISWR 250 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (616)
..+..++||||| ++....+ ..+.+|++.++... .+... .......+.|+
T Consensus 183 ~~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE
Confidence 246689999999 5555433 26889998866532 22110 01113467788
Q ss_pred cCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEec-cccccccceee--cCCCceEEEeeeccCccEEEE
Q 007140 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSW--CDDSLALVNETWYKTSQTRTW 327 (616)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~-~~~~~~~~~~w--spDg~~l~~~~~~~~~~~~l~ 327 (616)
|. .|+-. . ...+.+|+. .+++...+. .....+..+.| +||++.++... +++. +||
T Consensus 236 --g~-~LASa------------~-~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~--edG~-klw 293 (588)
T 2j04_A 236 --DY-KVVLT------------C-PGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSN--KTSY-KVL 293 (588)
T ss_dssp --TT-EEEEE------------C-SSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS--SCEE-EEE
T ss_pred --CC-EEEEE------------e-CCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc--CCCC-EEE
Confidence 33 23322 1 246777787 554443332 44455677899 99997655532 2344 787
Q ss_pred EEe
Q 007140 328 LVC 330 (616)
Q Consensus 328 ~~d 330 (616)
.++
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 754
No 150
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=98.46 E-value=3.2e-07 Score=94.45 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=89.1
Q ss_pred EEEEeecCCCCceEEEEeCCCC--ceeeeeeCCCCCCcccCCceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEe
Q 007140 441 ILTSKESKTEITQYHILSWPLK--KSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFW 518 (616)
Q Consensus 441 ~v~~~ss~~~p~~l~~~~~~~~--~~~~Lt~~~~~~~~~~~~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~ 518 (616)
+++..++...|.++|+++.... ..++++..+.. ........+.++++. ||.+|+|++++|.+. + +.|+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~---~--~~P~vl~ 157 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDERRQKGQARKVELYQKA-APLLSPPAERHELVV-DGIPMPVYVRIPEGP---G--PHPAVIM 157 (386)
T ss_dssp HHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHHH-GGGSSSCEEEEEEEE-TTEEEEEEEECCSSS---C--CEEEEEE
T ss_pred HHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHHH-HhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC---C--CCCEEEE
Confidence 3444555667777777653210 11233333211 111224788889987 999999999999875 2 2388887
Q ss_pred cccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC
Q 007140 519 AYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG 597 (616)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~ 597 (616)
.++. ...... .+...+.|+++||+|+. |+| |.... ...........+|+.+++++|.+++
T Consensus 158 ~hG~--------------~~~~~~-~~~~~~~l~~~G~~v~~~d~r-G~G~s---~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (386)
T 2jbw_A 158 LGGL--------------ESTKEE-SFQMENLVLDRGMATATFDGP-GQGEM---FEYKRIAGDYEKYTSAVVDLLTKLE 218 (386)
T ss_dssp ECCS--------------SCCTTT-THHHHHHHHHTTCEEEEECCT-TSGGG---TTTCCSCSCHHHHHHHHHHHHHHCT
T ss_pred eCCC--------------CccHHH-HHHHHHHHHhCCCEEEEECCC-CCCCC---CCCCCCCccHHHHHHHHHHHHHhCC
Confidence 7321 111100 11337889999999999 999 85332 1111111123467899999999999
Q ss_pred CccCCceEEEee
Q 007140 598 VGLPILYLNTTA 609 (616)
Q Consensus 598 ~vD~~ri~~~~~ 609 (616)
.+|++||+|.+.
T Consensus 219 ~~~~~~i~l~G~ 230 (386)
T 2jbw_A 219 AIRNDAIGVLGR 230 (386)
T ss_dssp TEEEEEEEEEEE
T ss_pred CcCcccEEEEEE
Confidence 999999998763
No 151
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.46 E-value=4.9e-05 Score=75.84 Aligned_cols=238 Identities=11% Similarity=0.010 Sum_probs=126.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....++|+|||+ |+++.. ....|+++++++++.+.++...... +..+.|++||+.++.....
T Consensus 46 ~~~~~~~~~~g~-l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~---- 107 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV---------FEGNIFKINPETKEIKRPFVSHKAN----PAAIKIHKDGRLFVCYLGD---- 107 (333)
T ss_dssp CEEEEEECTTSC-EEEEET---------TTCEEEEECTTTCCEEEEEECSSSS----EEEEEECTTSCEEEEECTT----
T ss_pred cccCcEECCCCC-EEEEEC---------CCCEEEEEeCCCCcEEEEeeCCCCC----cceEEECCCCcEEEEeCCC----
Confidence 357899999998 555432 2468999999998877764222111 5678999999854443100
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-Ceee-cCC---CCceeeeeECCCC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKD-FGT---PAVYTAVEPSPDQ 186 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~-l~~---~~~~~~~~~SpDg 186 (616)
+ . ....|+++|+++ +.+. +.. ......+.++|||
T Consensus 108 ------------------~----------------~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g 146 (333)
T 2dg1_A 108 ------------------F----------------K-------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG 146 (333)
T ss_dssp ------------------S----------------S-------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS
T ss_pred ------------------C----------------C-------CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC
Confidence 0 0 124678888844 4442 221 1245678999999
Q ss_pred cEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
+ +++....... ......|++++.++++...+... ......+.|+|||+. |++...
T Consensus 147 ~-l~v~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~-------------~~~~~~i~~~~dg~~-l~v~~~---- 201 (333)
T 2dg1_A 147 G-FYFTDFRGYS------TNPLGGVYYVSPDFRTVTPIIQN-------------ISVANGIALSTDEKV-LWVTET---- 201 (333)
T ss_dssp C-EEEEECCCBT------TBCCEEEEEECTTSCCEEEEEEE-------------ESSEEEEEECTTSSE-EEEEEG----
T ss_pred C-EEEEeccccc------cCCCceEEEEeCCCCEEEEeecC-------------CCcccceEECCCCCE-EEEEeC----
Confidence 6 4444332100 00124788999887655544320 001235789999873 544321
Q ss_pred CcccccCCCceeEeccCCCCC-CCC-ceEe-----cccc--ccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCC
Q 007140 267 DANVEVSPRDIIYTQPAEPAE-GEK-PEIL-----HKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 337 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-~g~-~~~l-----~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 337 (616)
....+++++. . .+. ...+ .... .....+.+++||..++... . ...|++++.++ ..
T Consensus 202 -------~~~~i~~~d~---~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~-~---~~~v~~~d~~g--~~ 265 (333)
T 2dg1_A 202 -------TANRLHRIAL---EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY-G---QGRVLVFNKRG--YP 265 (333)
T ss_dssp -------GGTEEEEEEE---CTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE-T---TTEEEEECTTS--CE
T ss_pred -------CCCeEEEEEe---cCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc-C---CCEEEEECCCC--CE
Confidence 1234555554 2 122 1111 1111 1334577888888655542 1 12688898854 11
Q ss_pred ceEEeecccc--cccCCCCCCCeeeCCCCCEEEEEee
Q 007140 338 PRVLFDRVFE--NVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 338 ~~~l~~~~~~--~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.+.+ ..... .....+ ..+++++||+.|++...
T Consensus 266 ~~~~-~~~~~~~g~~~~~--~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 266 IGQI-LIPGRDEGHMLRS--THPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEE-ECTTGGGTCSCBC--CEEEECTTSCEEEEEEE
T ss_pred EEEE-EcCCCccccccCc--ceEEECCCCCEEEEEeC
Confidence 1222 11100 000001 12788899988887764
No 152
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=0.00011 Score=75.53 Aligned_cols=75 Identities=17% Similarity=-0.025 Sum_probs=43.6
Q ss_pred CCCCCcccceEEccCCCeEEEEEeeccc--cccCCCceeEEEEECCCCceEecccCC-Cccc--cccccceEEecCCcEE
Q 007140 27 YPDGAKINFVSWSPDGKRIAFSVRVDEE--DNVSSCKLRVWIADAETGEAKPLFESP-DICL--NAVFGSFVWVNNSTLL 101 (616)
Q Consensus 27 ~~~~~~~~~~~~SPDG~~iaf~~~~~~~--~~~~~~~~~l~v~~~~~g~~~~lt~~~-~~~~--~~~~~~~~wspdg~~l 101 (616)
++.+... .+.+||||++|+........ .+ .....|.++|+.+++...-...+ .... ......+.+||||++|
T Consensus 115 I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G--~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~l 191 (426)
T 3c75_H 115 TDGGFLP-HPVAAEDGSFFAQASTVFERIARG--KRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNL 191 (426)
T ss_dssp EEECSSC-EEEECTTSSCEEEEEEEEEETTEE--EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEE
T ss_pred EECCCCC-ceEECCCCCEEEEEeccccccccC--CCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEE
Confidence 3333334 89999999986665421000 00 12468999999998754321111 0000 0113578999999998
Q ss_pred EEE
Q 007140 102 IFT 104 (616)
Q Consensus 102 ~~~ 104 (616)
++.
T Consensus 192 yV~ 194 (426)
T 3c75_H 192 LFY 194 (426)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 153
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=98.44 E-value=2.3e-07 Score=100.58 Aligned_cols=106 Identities=17% Similarity=0.188 Sum_probs=77.2
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCcc-CCCCCchH-HHHhhCCeEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF-SGMTPTSS-LIFLARRFAV 558 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-q~la~~Gy~V 558 (616)
..+.+.++.+||.+|.+.+++|.+- + |.|+||+.+| .+..... ..+. ... ++|+++||+|
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~~---~--~~P~vv~~~~------------~g~~~~~~~~y~-~~~~~~la~~Gy~v 69 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDAD---G--PVPVLLVRNP------------YDKFDVFAWSTQ-STNWLEFVRDGYAV 69 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCS---S--CEEEEEEEES------------SCTTCHHHHHTT-TCCTHHHHHTTCEE
T ss_pred EEEEEEEECCCCCEEEEEEEECCCC---C--CeeEEEEECC------------cCCCccccccch-hhHHHHHHHCCCEE
Confidence 4567899999999999999999762 2 3488887632 1111110 0001 134 8999999999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
+. |+| |+.+.+..|.. + ..+.+|+.++++||.++++.| .|||+.+.
T Consensus 70 v~~D~R-G~G~S~g~~~~--~-~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~ 116 (587)
T 3i2k_A 70 VIQDTR-GLFASEGEFVP--H-VDDEADAEDTLSWILEQAWCD-GNVGMFGV 116 (587)
T ss_dssp EEEECT-TSTTCCSCCCT--T-TTHHHHHHHHHHHHHHSTTEE-EEEEECEE
T ss_pred EEEcCC-CCCCCCCcccc--c-cchhHHHHHHHHHHHhCCCCC-CeEEEEee
Confidence 99 999 98777666553 2 347999999999999999887 89998763
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.43 E-value=1.4e-05 Score=80.33 Aligned_cols=213 Identities=8% Similarity=0.030 Sum_probs=113.2
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccC---CCeEEEEEeeccccccCCCceeEEEEECCCCc-e-EecccC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-A-KPLFES 80 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPD---G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~-~-~~lt~~ 80 (616)
.|.|-++.. ++...+..+.....+..+.|+|+ |+.|+.... ...|.++++.+++ . ..+..+
T Consensus 45 ~v~iw~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~ 110 (357)
T 3i2n_A 45 VIQLYEIQH----GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF----------GGNLHIWNLEAPEMPVYSVKGH 110 (357)
T ss_dssp EEEEEEECS----SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET----------TSCEEEECTTSCSSCSEEECCC
T ss_pred EEEEEeCCC----CcccceeeecccCcEEEEEEcCCCCCCceEEEecC----------CCeEEEEeCCCCCccEEEEEec
Confidence 366667753 55544432222225789999999 677766542 3567888988775 3 333222
Q ss_pred CCccccccccce------EEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEe
Q 007140 81 PDICLNAVFGSF------VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (616)
Q Consensus 81 ~~~~~~~~~~~~------~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~ 154 (616)
.. . +..+ .|+|+++.|+....
T Consensus 111 ~~-~----v~~~~~~~~~~~s~~~~~l~~~~~------------------------------------------------ 137 (357)
T 3i2n_A 111 KE-I----INAIDGIGGLGIGEGAPEIVTGSR------------------------------------------------ 137 (357)
T ss_dssp SS-C----EEEEEEESGGGCC-CCCEEEEEET------------------------------------------------
T ss_pred cc-c----eEEEeeccccccCCCccEEEEEeC------------------------------------------------
Confidence 22 1 3444 46788988766421
Q ss_pred ccceEEEEeC-CCC--eeecCC-----CCceeeee----ECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE
Q 007140 155 TTAQLVLGSL-DGT--AKDFGT-----PAVYTAVE----PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR 222 (616)
Q Consensus 155 ~~~~l~~~d~-~g~--~~~l~~-----~~~~~~~~----~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 222 (616)
...|.++|+ +++ ...+.. ...+..+. |+|+++.|+....+ ..|.+||+.+++..
T Consensus 138 -d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 138 -DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMALR 203 (357)
T ss_dssp -TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEEE
T ss_pred -CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCcee
Confidence 123445555 222 222221 11233344 89999998887643 36889999877654
Q ss_pred EecCCCCCCCCCccccCccCCCCcceeec---CCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-eEec---
Q 007140 223 ELCDLPPAEDIPVCYNSVREGMRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH--- 295 (616)
Q Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~~~~~wsp---dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~--- 295 (616)
...... .....+.|+| ++.. |+.. . ....+.+|+. ..++. ..+.
T Consensus 204 ~~~~~~-------------~~v~~~~~~~~~~~~~~-l~~~-~-----------~dg~i~i~d~---~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 204 WETNIK-------------NGVCSLEFDRKDISMNK-LVAT-S-----------LEGKFHVFDM---RTQHPTKGFASVS 254 (357)
T ss_dssp EEEECS-------------SCEEEEEESCSSSSCCE-EEEE-E-----------STTEEEEEEE---EEEETTTEEEEEE
T ss_pred eecCCC-------------CceEEEEcCCCCCCCCE-EEEE-C-----------CCCeEEEEeC---cCCCcccceeeec
Confidence 432211 1123578998 7763 3222 1 1234555554 22111 1111
Q ss_pred --cccccccceeecCCCc-eEEEeeeccCccEEEEEEe
Q 007140 296 --KLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVC 330 (616)
Q Consensus 296 --~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~l~~~d 330 (616)
.....+..+.|+|++. .|+... . ++..+||.+.
T Consensus 255 ~~~~~~~v~~~~~~~~~~~~l~~~~-~-dg~i~iwd~~ 290 (357)
T 3i2n_A 255 EKAHKSTVWQVRHLPQNRELFLTAG-G-AGGLHLWKYE 290 (357)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEE-T-TSEEEEEEEE
T ss_pred cCCCcCCEEEEEECCCCCcEEEEEe-C-CCcEEEeecC
Confidence 3344567789999988 455443 2 2444555544
No 155
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.43 E-value=5.6e-05 Score=74.56 Aligned_cols=194 Identities=12% Similarity=0.095 Sum_probs=109.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|||+.|+..+. ...|.++++.+++........... +..+.|+|+++.|+....
T Consensus 57 ~v~~~~~~~~~~~l~s~s~----------d~~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs~----- 117 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGSD----- 117 (304)
T ss_dssp CEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEET-----
T ss_pred cEEEEEEeCCCCEEEEECC----------CCEEEEEECCCCcEEEEEeCCCCc----EEEEEEcCCCCEEEEECC-----
Confidence 4678899999998776542 357888899988754433222222 668999999998766421
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-Ceee-cC-CCCceeeeeECC-CC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKD-FG-TPAVYTAVEPSP-DQ 186 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~~~~-l~-~~~~~~~~~~Sp-Dg 186 (616)
...+.++|+ ++ ...+ +. ....+..++|+| |+
T Consensus 118 --------------------------------------------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 118 --------------------------------------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153 (304)
T ss_dssp --------------------------------------------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCT
T ss_pred --------------------------------------------CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCC
Confidence 123444555 33 2222 22 233567899999 56
Q ss_pred cEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeec--CCCceEEEEEee
Q 007140 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQ 263 (616)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp--dg~~~l~~~~~~ 263 (616)
+.|+....+ ..+.+||+.... ...+.... ..+...+.|+| +++ ++...
T Consensus 154 ~~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~--~l~s~-- 204 (304)
T 2ynn_A 154 STFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKP--YMITA-- 204 (304)
T ss_dssp TEEEEEETT-------------SEEEEEETTCSSCSEEEECCC------------TTCEEEEEECCSTTCC--EEEEE--
T ss_pred CEEEEEeCC-------------CeEEEEECCCCCccceeccCC------------cCcEEEEEEEEcCCCC--EEEEE--
Confidence 666665433 368889986432 22222100 00112345555 444 22221
Q ss_pred cCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.....+.+|+. ..++.. .+......+..+.|+|++..|+.... ++ .|.+.|+.+
T Consensus 205 ---------s~D~~i~iWd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--Dg--~i~iWd~~~ 259 (304)
T 2ynn_A 205 ---------SDDLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE--DG--TLKIWNSST 259 (304)
T ss_dssp ---------ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEEEEET--TS--CEEEEETTT
T ss_pred ---------cCCCeEEEEeC---CCCccceeeCCCCCCEEEEEECCCCCEEEEEcC--CC--eEEEEECCC
Confidence 12345667776 433322 24334455677899999987766542 23 355567766
No 156
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.42 E-value=0.00032 Score=71.09 Aligned_cols=121 Identities=10% Similarity=0.050 Sum_probs=68.9
Q ss_pred cCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCCCccc
Q 007140 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPKKTMV 118 (616)
Q Consensus 40 PDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~-~~~~~~~~~~~ 118 (616)
||+++ +|+.+.+.. ......|+++|.++++......... .. .+.+||||++|+..... .+.
T Consensus 13 ~~~~~-~yv~~~~~~---~~~d~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spdg~~lyv~~~~~~~~-------- 74 (361)
T 2oiz_A 13 PQENR-IYVMDSVFM---HLTESRVHVYDYTNGKFLGMVPTAF-----NG-HVQVSNDGKKIYTMTTYHERI-------- 74 (361)
T ss_dssp CGGGE-EEEEECCGG---GGGGCEEEEEETTTCCEEEEEECCE-----EE-EEEECTTSSEEEEEEEEETTS--------
T ss_pred CCCCE-EEEECCCCC---ccccCeEEEEECCCCeEEEEecCCC-----CC-ceEECCCCCEEEEEEeccccc--------
Confidence 47776 666653110 0123589999999887543221111 13 78999999988775210 000
Q ss_pred CCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC--C-----CCceeeeeECCCCcEE
Q 007140 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG--T-----PAVYTAVEPSPDQKYV 189 (616)
Q Consensus 119 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~--~-----~~~~~~~~~SpDg~~i 189 (616)
..| + ....|.++|+ +++. ..+. . ......+++||||++|
T Consensus 75 ---------~~g----------------~-------~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l 122 (361)
T 2oiz_A 75 ---------TRG----------------K-------RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFI 122 (361)
T ss_dssp ---------SSS----------------C-------EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEE
T ss_pred ---------ccC----------------C-------CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEE
Confidence 000 0 1245777787 5543 2232 1 1123478999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceE
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 221 (616)
++..... ...|.++|+..++.
T Consensus 123 ~v~n~~~-----------~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 123 VLQNASP-----------ATSIGIVDVAKGDY 143 (361)
T ss_dssp EEEEESS-----------SEEEEEEETTTTEE
T ss_pred EEECCCC-----------CCeEEEEECCCCcE
Confidence 8874321 23688999986643
No 157
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=98.41 E-value=1.1e-06 Score=88.90 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=77.8
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
...+.+++++.||.+|+++++.|.+ . .+.|+||++++ +..... .+.....++++||+|+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~~~~P~~-~----~~~p~vv~~HG--------------~g~~~~--~~~~~~~~~~~G~~v~ 138 (346)
T 3fcy_A 80 AECYDLYFTGVRGARIHAKYIKPKT-E----GKHPALIRFHG--------------YSSNSG--DWNDKLNYVAAGFTVV 138 (346)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEESC-S----SCEEEEEEECC--------------TTCCSC--CSGGGHHHHTTTCEEE
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCC-C----CCcCEEEEECC--------------CCCCCC--ChhhhhHHHhCCcEEE
Confidence 4778899999999999999999987 2 23488988843 111111 1123346889999999
Q ss_pred E-CCCCCccccCCCcc-----------------C--ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 560 A-GPSIPIIGEGDKLP-----------------N--DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~-----------------~--~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
. |+| |..+.+.... . ..+-...++|+.++++++..++.+|++||+|.+-
T Consensus 139 ~~D~r-G~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~ 207 (346)
T 3fcy_A 139 AMDVR-GQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGP 207 (346)
T ss_dssp EECCT-TSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred EEcCC-CCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEc
Confidence 9 999 8755544322 1 1112345799999999999998899999998763
No 158
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.40 E-value=2.1e-05 Score=81.92 Aligned_cols=114 Identities=10% Similarity=0.058 Sum_probs=62.4
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc----eEEEecCCCCCCCCCccccCccCCCCcceee
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (616)
..+..++|+|++..++++.... ..|.+||+..+ ....+... ......+.|+
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~d------------g~i~i~d~~~~~~~~~~~~~~~~-------------~~~v~~i~~~ 286 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADD------------QKLMIWDTRNNNTSKPSHTVDAH-------------TAEVNCLSFN 286 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCSCSSSCSEEEECC-------------SSCEEEEEEC
T ss_pred CCEeeeEEeCCCCCEEEEEeCC------------CeEEEEECCCCCCCcceeEeecC-------------CCCeEEEEeC
Confidence 3567899999655555443322 36889998754 22222110 1113468899
Q ss_pred cCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCC-CC-ceEeccccccccceeecCCCce-EEEeeeccCccEEEE
Q 007140 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EK-PEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTW 327 (616)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~l~ 327 (616)
|+++. ++.... ....+.+|+. .. +. ...+......+..+.|+|++.. |+... . ++. |.
T Consensus 287 p~~~~-~l~tg~-----------~dg~v~vwd~---~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~-~-d~~--i~ 347 (430)
T 2xyi_A 287 PYSEF-ILATGS-----------ADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-T-DRR--LH 347 (430)
T ss_dssp SSCTT-EEEEEE-----------TTSEEEEEET---TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE-T-TSC--CE
T ss_pred CCCCC-EEEEEe-----------CCCeEEEEeC---CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe-C-CCc--EE
Confidence 99875 333311 2245666676 32 22 3334444556778999999875 44433 2 233 44
Q ss_pred EEeCC
Q 007140 328 LVCPG 332 (616)
Q Consensus 328 ~~d~~ 332 (616)
++|+.
T Consensus 348 iwd~~ 352 (430)
T 2xyi_A 348 VWDLS 352 (430)
T ss_dssp EEEGG
T ss_pred EEeCC
Confidence 45554
No 159
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=98.40 E-value=1.6e-06 Score=86.89 Aligned_cols=102 Identities=12% Similarity=0.049 Sum_probs=72.7
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~V 558 (616)
...+.+++++.|| +|++++|+|.+.. .|+||++|++. .+.++...| . .....|++ +||+|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~~------~p~vv~~HGgg--------~~~g~~~~~---~-~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPTS------QATLYYLHGGG--------FILGNLDTH---D-RIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSSC------SCEEEEECCST--------TTSCCTTTT---H-HHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCCC------CcEEEEECCCC--------cccCChhhh---H-HHHHHHHHHcCCEE
Confidence 4458899999999 8999999997532 28999994321 111111122 1 33556777 89999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
+. ||| ++.++. |. ..++|+.++++||.+.. -+|++||+|.+.
T Consensus 122 ~~~dyr-~~p~~~--~~------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~ 167 (326)
T 3ga7_A 122 IGIDYS-LSPQAR--YP------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGD 167 (326)
T ss_dssp EEECCC-CTTTSC--TT------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEE
T ss_pred EEeeCC-CCCCCC--CC------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEe
Confidence 99 999 875542 22 46799999999999874 479999999763
No 160
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.39 E-value=6.9e-05 Score=75.78 Aligned_cols=183 Identities=10% Similarity=0.035 Sum_probs=110.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEec--CCcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN--NSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp--dg~~l~~~~~~~~ 109 (616)
.+....|+|+++.|+..+. ...|.++|+.+++........... +..+.|+| +|+.|+....
T Consensus 156 ~v~~~~~~~~~~~l~t~s~----------D~~v~lwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~g~~l~sgs~--- 218 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASG----------DGTCALWDVESGQLLQSFHGHGAD----VLCLDLAPSETGNTFVSGGC--- 218 (354)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECCCSSCCEEEEEET---
T ss_pred cEEEEEEeCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEEcCCCCC----eEEEEEEeCCCCCEEEEEeC---
Confidence 4678899999998876542 357788899988765433222111 45667776 4566555311
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ecC-CCCceeeeeECCCC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFG-TPAVYTAVEPSPDQ 186 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~-~~~~~~~~~~SpDg 186 (616)
...+.++|+ +++.. .+. ....+..++|+|+|
T Consensus 219 ----------------------------------------------Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 219 ----------------------------------------------DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG 252 (354)
T ss_dssp ----------------------------------------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred ----------------------------------------------CCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC
Confidence 134566677 55433 332 23456789999999
Q ss_pred cEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecC
Q 007140 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (616)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (616)
+.|+....+ ..+.+||+..++. ..+..... ..+...+.|+|+|+. +....
T Consensus 253 ~~l~s~s~D-------------~~v~lwd~~~~~~~~~~~~~~~-----------~~~~~~~~~s~~g~~--l~~g~--- 303 (354)
T 2pbi_B 253 DAFASGSDD-------------ATCRLYDLRADREVAIYSKESI-----------IFGASSVDFSLSGRL--LFAGY--- 303 (354)
T ss_dssp SEEEEEETT-------------SCEEEEETTTTEEEEEECCTTC-----------CSCEEEEEECTTSSE--EEEEE---
T ss_pred CEEEEEeCC-------------CeEEEEECCCCcEEEEEcCCCc-----------ccceeEEEEeCCCCE--EEEEE---
Confidence 988877643 2588999876543 32221100 011235789999973 22211
Q ss_pred CCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEee
Q 007140 266 GDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNET 317 (616)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~ 317 (616)
....+.+|+. ..++.. .+......+..+.|+|||..|+...
T Consensus 304 --------~d~~i~vwd~---~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 304 --------NDYTINVWDV---LKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp --------TTSCEEEEET---TTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred --------CCCcEEEEEC---CCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 2235666776 434432 3444555677899999999877654
No 161
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=98.39 E-value=8e-07 Score=88.19 Aligned_cols=108 Identities=10% Similarity=0.006 Sum_probs=77.6
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
...+.+++++.||.+|+++++.|.+ . + +.|+||+.|+ +...+ ...+.....|+++||.|+
T Consensus 54 ~~~~~~~~~~~~g~~i~~~~~~P~~-~--~--~~p~vv~~HG--------------~~~~~-~~~~~~~~~l~~~g~~v~ 113 (318)
T 1l7a_A 54 VKVYRLTYKSFGNARITGWYAVPDK-E--G--PHPAIVKYHG--------------YNASY-DGEIHEMVNWALHGYATF 113 (318)
T ss_dssp EEEEEEEEEEGGGEEEEEEEEEESS-C--S--CEEEEEEECC--------------TTCCS-GGGHHHHHHHHHTTCEEE
T ss_pred eEEEEEEEEccCCCEEEEEEEeeCC-C--C--CccEEEEEcC--------------CCCCC-CCCcccccchhhCCcEEE
Confidence 3677889998899999999999987 2 2 3488998843 11110 001123347899999999
Q ss_pred E-CCCCCccccCCCccC-----------------ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPN-----------------DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~-----------------~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
. |+| |....+..+.. .-+-...++|+.+++++|.+++.+|++||+|.+
T Consensus 114 ~~d~r-g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G 179 (318)
T 1l7a_A 114 GMLVR-GQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTG 179 (318)
T ss_dssp EECCT-TTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEE
T ss_pred EecCC-CCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEe
Confidence 9 999 87655544210 001246789999999999999889999999876
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.39 E-value=0.00011 Score=74.65 Aligned_cols=84 Identities=18% Similarity=0.084 Sum_probs=45.8
Q ss_pred CCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc--cccccceEEe
Q 007140 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWV 95 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~--~~~~~~~~ws 95 (616)
+++.... ++.+... .+.|||||++|+............+....|.++|+++++...-........ ......+.+|
T Consensus 40 t~~~~~~--i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~s 116 (361)
T 2oiz_A 40 NGKFLGM--VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQT 116 (361)
T ss_dssp TCCEEEE--EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred CCeEEEE--ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEEC
Confidence 3554322 3444334 889999999866654211000000123568999998876543221110000 0114578999
Q ss_pred cCCcEEEEE
Q 007140 96 NNSTLLIFT 104 (616)
Q Consensus 96 pdg~~l~~~ 104 (616)
|||++|+..
T Consensus 117 pdg~~l~v~ 125 (361)
T 2oiz_A 117 TDGKFIVLQ 125 (361)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 999988775
No 163
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.38 E-value=7e-05 Score=75.17 Aligned_cols=182 Identities=15% Similarity=0.117 Sum_probs=108.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|+|+++ |+..+ ....|.++|+.+++........... +..+.|+|+++.|+....
T Consensus 145 ~v~~~~~~~~~~-l~s~s----------~d~~i~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sg~~----- 204 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSS----------GDTTCALWDIETGQQTTTFTGHTGD----VMSLSLAPDTRLFVSGAC----- 204 (340)
T ss_dssp CEEEEEEEETTE-EEEEE----------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred cEEEEEECCCCc-EEEEE----------CCCcEEEEECCCCcEEEEEcCCCCc----eEEEEECCCCCEEEEEeC-----
Confidence 466788999986 33322 2356778899988754433222212 568899999997665311
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCe-eecC-CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...+.++|+ +++. ..+. ....+..++|+|||+.
T Consensus 205 --------------------------------------------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 205 --------------------------------------------DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp --------------------------------------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred --------------------------------------------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 124556666 4443 2333 2335678999999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCC
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (616)
|+....+ ..+.+||+..++. ..+.. +. ...+...+.|+|||+. | ....
T Consensus 241 l~s~s~d-------------~~v~iwd~~~~~~~~~~~~-~~----------~~~~v~~~~~s~~g~~-l-~~g~----- 289 (340)
T 1got_B 241 FATGSDD-------------ATCRLFDLRADQELMTYSH-DN----------IICGITSVSFSKSGRL-L-LAGY----- 289 (340)
T ss_dssp EEEEETT-------------SCEEEEETTTTEEEEEECC-TT----------CCSCEEEEEECTTSSE-E-EEEE-----
T ss_pred EEEEcCC-------------CcEEEEECCCCcEEEEEcc-CC----------cccceEEEEECCCCCE-E-EEEC-----
Confidence 8877643 2688999876543 32221 00 0011235789999983 2 2211
Q ss_pred cccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEee
Q 007140 268 ANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNET 317 (616)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~ 317 (616)
....+.+|+. ..++.. .+......+..+.|+|||..|+...
T Consensus 290 ------~d~~i~vwd~---~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 290 ------DDFNCNVWDA---LKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp ------TTSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred ------CCCeEEEEEc---ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 2245667776 433332 3444455677889999999877654
No 164
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.37 E-value=1.8e-05 Score=79.76 Aligned_cols=113 Identities=13% Similarity=0.179 Sum_probs=73.4
Q ss_pred cccceEEccC----CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEec-CCcEEEEEec
Q 007140 32 KINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIP 106 (616)
Q Consensus 32 ~~~~~~~SPD----G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~ 106 (616)
.+....|+|+ |+.|+.... ...|.++++.+++........... +..+.|+| +++.|+....
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~l~s~~~ 136 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGS----------RGIIRIINPITMQCIKHYVGHGNA----INELKFHPRDPNLLLSVSK 136 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEET----------TCEEEEECTTTCCEEEEEESCCSC----EEEEEECSSCTTEEEEEET
T ss_pred cEEEEEeccCCCCCCCEEEEecC----------CCEEEEEEchhceEeeeecCCCCc----EEEEEECCCCCCEEEEEeC
Confidence 4778999999 445554432 357888899988765443322222 67899999 8887766411
Q ss_pred CCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeec----CCCCceeee
Q 007140 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDF----GTPAVYTAV 180 (616)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l----~~~~~~~~~ 180 (616)
...|.++|+ +++ ...+ .....+..+
T Consensus 137 -------------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 137 -------------------------------------------------DHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp -------------------------------------------------TSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred -------------------------------------------------CCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 134666777 443 2333 223456789
Q ss_pred eECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce
Q 007140 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (616)
Q Consensus 181 ~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (616)
+|+|+++.|+....+ ..|.+||+..++
T Consensus 168 ~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~ 194 (366)
T 3k26_A 168 DYDLLGEKIMSCGMD-------------HSLKLWRINSKR 194 (366)
T ss_dssp EECTTSSEEEEEETT-------------SCEEEEESCSHH
T ss_pred EECCCCCEEEEecCC-------------CCEEEEECCCCc
Confidence 999999998877643 258888887543
No 165
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.36 E-value=0.00055 Score=69.23 Aligned_cols=68 Identities=19% Similarity=0.035 Sum_probs=40.2
Q ss_pred ceEEccCCCeEEEEEeeccc--cccCCCceeEEEEECCCCceEecccCCCc---cccccccceEEecCCcEEEEE
Q 007140 35 FVSWSPDGKRIAFSVRVDEE--DNVSSCKLRVWIADAETGEAKPLFESPDI---CLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 35 ~~~~SPDG~~iaf~~~~~~~--~~~~~~~~~l~v~~~~~g~~~~lt~~~~~---~~~~~~~~~~wspdg~~l~~~ 104 (616)
.+.+||||++++........ .+ +....|.++|+++++...-...+.+ ........+.+||||++|++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G--~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARG--ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFY 154 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEE--EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEE
T ss_pred cEEECCCCCEEEEEcccccccccC--CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEE
Confidence 49999999997665421000 00 1236799999999875432211110 000113478999999998774
No 166
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.36 E-value=4.4e-05 Score=77.17 Aligned_cols=194 Identities=14% Similarity=0.198 Sum_probs=109.2
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+..+.|+|||+.|+.... ...|.++++.+++......... ....+..+.|+|+++.|+....+
T Consensus 54 ~v~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d---- 117 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT----------DRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGSGS---- 117 (372)
T ss_dssp CEEEEEEETTTTEEEEEET----------TSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEETT----
T ss_pred cccEEEEeCCCCEEEEEcC----------CCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEeCC----
Confidence 5789999999999887652 2456777877776333221110 01125688999999988775211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC----eeecC--CCCceeeeeECC
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFG--TPAVYTAVEPSP 184 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~----~~~l~--~~~~~~~~~~Sp 184 (616)
..+.++|+ .++ ...+. ....+..++|+|
T Consensus 118 ---------------------------------------------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 118 ---------------------------------------------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp ---------------------------------------------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred ---------------------------------------------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 12333344 222 12222 223567899999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCC-------------------CceEEEecCCCCCCCCCccccCccCCCC
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-------------------GKLVRELCDLPPAEDIPVCYNSVREGMR 245 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (616)
|++.|+....+ ..+.+||+. +.....+... .....
T Consensus 153 ~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~ 206 (372)
T 1k8k_C 153 NSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-------------CGWVH 206 (372)
T ss_dssp TSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-------------SSCEE
T ss_pred CCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccchhhheEecCCC-------------CCeEE
Confidence 99988877543 257888853 2222222210 01123
Q ss_pred cceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccE
Q 007140 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQT 324 (616)
Q Consensus 246 ~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (616)
.+.|+|+++. |+.. . ....+.+|+. ..++.. .+.........+.|+||+..++... ++..
T Consensus 207 ~~~~~~~~~~-l~~~-~-----------~d~~i~i~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---d~~i 267 (372)
T 1k8k_C 207 GVCFSANGSR-VAWV-S-----------HDSTVCLADA---DKKMAVATLASETLPLLAVTFITESSLVAAGH---DCFP 267 (372)
T ss_dssp EEEECSSSSE-EEEE-E-----------TTTEEEEEEG---GGTTEEEEEECSSCCEEEEEEEETTEEEEEET---TSSC
T ss_pred EEEECCCCCE-EEEE-e-----------CCCEEEEEEC---CCCceeEEEccCCCCeEEEEEecCCCEEEEEe---CCeE
Confidence 5789999873 3322 1 2235666665 433433 2333344567789999998665542 2334
Q ss_pred EEEEEeC
Q 007140 325 RTWLVCP 331 (616)
Q Consensus 325 ~l~~~d~ 331 (616)
.+|.++-
T Consensus 268 ~i~~~~~ 274 (372)
T 1k8k_C 268 VLFTYDS 274 (372)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 5555543
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.36 E-value=0.00012 Score=76.29 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=71.0
Q ss_pred cccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007140 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (616)
Q Consensus 32 ~~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (616)
.+..+.||| ||++|+- ... + ..|.++|+.++..+.+...... ...+..+.|+||++.|+....
T Consensus 166 ~V~~l~f~p~~~~~l~s-~s~-------D--~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~---- 229 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYA-SSM-------E--GTTRLQDFKGNILRVFASSDTI--NIWFCSLDVSASSRMVVTGDN---- 229 (435)
T ss_dssp CCCEEEECSSCTTEEEE-ECS-------S--SCEEEEETTSCEEEEEECCSSC--SCCCCCEEEETTTTEEEEECS----
T ss_pred CEEEEEEeCCCCCEEEE-EeC-------C--CEEEEeeccCCceeEEeccCCC--CccEEEEEECCCCCEEEEEeC----
Confidence 588999999 6776554 322 2 4567779987765555433221 112457899999998766310
Q ss_pred CCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecC-CCCceeeeeECCCCcE
Q 007140 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~-~~~~~~~~~~SpDg~~ 188 (616)
...|.++|+++ ....+. ....+..++|+|+++.
T Consensus 230 ---------------------------------------------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 230 ---------------------------------------------VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp ---------------------------------------------SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSS
T ss_pred ---------------------------------------------CCcEeeeccCcceeEEEecccceEEeeeecCCCce
Confidence 13466677755 333333 2335678999999987
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
++++.... ..|.+||+...
T Consensus 265 ~~~s~s~d------------~~v~iwd~~~~ 283 (435)
T 4e54_B 265 FLATASVD------------QTVKIWDLRQV 283 (435)
T ss_dssp EEEEEETT------------SBCCEEETTTC
T ss_pred EEEEecCc------------ceeeEEecccc
Confidence 76664332 25678887643
No 168
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=4.9e-05 Score=87.00 Aligned_cols=203 Identities=12% Similarity=0.067 Sum_probs=115.3
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+...+|||||+.||.-.. ...|.+|+..+++......... .+..+.|+| |++|+....
T Consensus 19 ~V~~lafspdg~~lAsgs~----------Dg~I~lw~~~~~~~~~~~~~~~-----~V~~l~fsp-g~~L~S~s~----- 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATV----------TGEVHIYGQQQVEVVIKLEDRS-----AIKEMRFVK-GIYLVVINA----- 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEET----------TSEEEEECSTTCEEEEECSSCC-----CEEEEEEET-TTEEEEEET-----
T ss_pred CcEEEEECCCCCEEEEEeC----------CCEEEEEeCCCcEEEEEcCCCC-----CEEEEEEcC-CCEEEEEEC-----
Confidence 4789999999998887542 2578888887766543322221 267899999 886555311
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCCCCceeeeeECCCCcEE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYV 189 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~~~~~~~~~~SpDg~~i 189 (616)
...|.++|+ +++ ...+.....+..++|+||+++|
T Consensus 78 --------------------------------------------D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 78 --------------------------------------------KDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp --------------------------------------------TCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEE
T ss_pred --------------------------------------------cCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 134566677 443 3334434456789999999999
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
+....+ ..|.+||+.+++.....--...... ....+.......+.|+|++...|+ +.
T Consensus 114 ~sgs~d-------------g~V~lwd~~~~~~~~~~i~~~~~~~-~~~~~h~~~V~sl~~sp~~~~~l~-~g-------- 170 (902)
T 2oaj_A 114 LIGLQN-------------GSMIVYDIDRDQLSSFKLDNLQKSS-FFPAARLSPIVSIQWNPRDIGTVL-IS-------- 170 (902)
T ss_dssp EEEETT-------------SCEEEEETTTTEEEEEEECCHHHHH-TCSSSCCCCCCEEEEETTEEEEEE-EE--------
T ss_pred EEEcCC-------------CcEEEEECCCCccccceeccccccc-cccccCCCCeEEEEEccCCCCEEE-EE--------
Confidence 887643 3688999987754321100000000 000001112346899997543232 21
Q ss_pred cccCCCceeEeccCCCCCCCCceE-eccc------------------cccccceeecCCCceEEEeeeccCccEEEEEEe
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEI-LHKL------------------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~-l~~~------------------~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (616)
.....+ +|+. ..++... +... ...+..+.|+|||..|+.... ++ .|.+.|
T Consensus 171 ---~~dg~v-lWd~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~--Dg--~i~lWd 239 (902)
T 2oaj_A 171 ---YEYVTL-TYSL---VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE--DN--SLVFWD 239 (902)
T ss_dssp ---CSSCEE-EEET---TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET--TC--CEEEEE
T ss_pred ---eCCCcE-EEEC---CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC--CC--eEEEEE
Confidence 122345 6676 4333222 2111 134667899999998776542 23 456667
Q ss_pred CCC
Q 007140 331 PGS 333 (616)
Q Consensus 331 ~~~ 333 (616)
+.+
T Consensus 240 ~~~ 242 (902)
T 2oaj_A 240 ANS 242 (902)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.35 E-value=0.00027 Score=73.13 Aligned_cols=58 Identities=21% Similarity=0.461 Sum_probs=39.7
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
.+-+.||+++ .||.-. ...|++||+.+|+..++...... ...+..+.|+|||++|+..
T Consensus 108 ~~~l~wS~~n-~lAvgl-----------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVAL-----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp CBCEEECTTS-EEEEEE-----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEE
T ss_pred ceeEEECCCC-EEEEEe-----------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEE
Confidence 4558999864 565432 25799999999987665433211 1126789999999988774
No 170
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=98.34 E-value=2.7e-06 Score=86.61 Aligned_cols=109 Identities=13% Similarity=0.090 Sum_probs=71.5
Q ss_pred CceeEEEEECCCCcEEEEEEEc-CCCCC------------------CCCCCCCcEEEecccCcccccccCCcccCCCCcc
Q 007140 480 LQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF 540 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~-P~~~~------------------~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~ 540 (616)
+..+-+++.+.|| +...+|+ |.+.. +....++|+||++|++.+ ..++....
T Consensus 62 v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~--------~~g~~~~~ 131 (365)
T 3ebl_A 62 VSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSF--------VHSSASST 131 (365)
T ss_dssp EEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTT--------TSCCTTBH
T ss_pred CceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCcc--------ccCCCchh
Confidence 4778899999998 7778887 97641 112235699999944311 11111110
Q ss_pred CCCCCchHHHHhhC-CeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC----CccCC-ceEEEee
Q 007140 541 SGMTPTSSLIFLAR-RFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VGLPI-LYLNTTA 609 (616)
Q Consensus 541 ~~~~~~~~q~la~~-Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~----~vD~~-ri~~~~~ 609 (616)
.+. ...+.||++ ||+|+. ||| ++.+.. |. ..++|+.++++||.++. .+|++ ||+|.+-
T Consensus 132 -~~~-~~~~~la~~~g~~Vv~~dyR-~~p~~~--~~------~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~ 196 (365)
T 3ebl_A 132 -IYD-SLCRRFVKLSKGVVVSVNYR-RAPEHR--YP------CAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGD 196 (365)
T ss_dssp -HHH-HHHHHHHHHHTSEEEEECCC-CTTTSC--TT------HHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEE
T ss_pred -hHH-HHHHHHHHHCCCEEEEeeCC-CCCCCC--Cc------HHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEee
Confidence 001 335678876 999999 999 875432 22 56899999999999775 68999 9999863
No 171
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=98.33 E-value=1e-06 Score=83.59 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=76.9
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCC-ccCCCCCchHHHHhhCCeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~la~~Gy~V 558 (616)
+..+.++++. +|.++.++++.|.+.. .|.|+||+.++. ++.. .+ . ...+.|+++||.|
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~~~----~~~p~vv~~HG~------------~g~~~~~---~-~~~~~l~~~G~~v 62 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKNAD----GPLPIVIVVQEI------------FGVHEHI---R-DLCRRLAQEGYLA 62 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETTCC----SCEEEEEEECCT------------TCSCHHH---H-HHHHHHHHTTCEE
T ss_pred ceeeeEEEec-CCcceEEEEecCCCCC----CCCCEEEEEcCc------------CccCHHH---H-HHHHHHHHCCcEE
Confidence 3567889988 9999999999998642 234889888321 1111 11 1 4467899999999
Q ss_pred EE-CCCCCccccCCCccC-Chh---------HHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 559 LA-GPSIPIIGEGDKLPN-DRF---------VEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~-~~~---------g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
+. |+| |..|....+.. ..+ .....+|+.+++++|.+++ +|++||++.+-
T Consensus 63 ~~~d~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~ 122 (241)
T 3f67_A 63 IAPELY-FRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGF 122 (241)
T ss_dssp EEECTT-TTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEE
T ss_pred EEeccc-ccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEE
Confidence 99 999 76555444443 111 1356899999999999988 99999998763
No 172
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.33 E-value=9e-05 Score=72.76 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=36.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc---eEecccCCCccccccccceEEecC--CcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~---~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~ 104 (616)
.+...+|||||++||-.+. + ..|.++++.++. ...+..+.. . +..+.|+++ ++.|+..
T Consensus 11 ~V~~~~~s~~g~~las~s~--------D--~~v~iw~~~~~~~~~~~~l~gH~~-~----V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSS--------D--KTIKIFEVEGETHKLIDTLTGHEG-P----VWRVDWAHPKFGTILASC 73 (297)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEEBCSSCBCCCEEECCCSS-C----EEEEEECCGGGCSEEEEE
T ss_pred ceEEEEECCCCCEEEEEeC--------C--CEEEEEecCCCCcEEEEEEccccC-C----eEEEEecCCCcCCEEEEE
Confidence 4678899999999876552 2 456666776532 223322222 2 567899864 7766653
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.32 E-value=0.00025 Score=69.36 Aligned_cols=220 Identities=11% Similarity=0.047 Sum_probs=119.1
Q ss_pred ceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcE
Q 007140 21 EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTL 100 (616)
Q Consensus 21 ~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~ 100 (616)
.+.+. .+.. ....+.++|||+.++ .. .+...|++++.++|+.+.+..............+.++|||+.
T Consensus 61 ~~~~~-~~~~-~~~~l~~~~dg~l~v--~~--------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l 128 (296)
T 3e5z_A 61 LSPEM-HPSH-HQNGHCLNKQGHLIA--CS--------HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSL 128 (296)
T ss_dssp EEEEE-SSCS-SEEEEEECTTCCEEE--EE--------TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCE
T ss_pred eEEEE-CCCC-CcceeeECCCCcEEE--Ee--------cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCE
Confidence 55554 2222 467889999998533 32 234689999998888766643211110112346889999984
Q ss_pred EEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCeeecCCC-Cceee
Q 007140 101 LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTP-AVYTA 179 (616)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~~~l~~~-~~~~~ 179 (616)
+++... . |.. ..... .....+ .....||.++..|+.+.+... .....
T Consensus 129 -~vtd~~-~--------------------g~~---~~~~~-~~~~~~------~~~~~l~~~~~~g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 129 -WFSDPT-Y--------------------GID---KPEEG-YGGEME------LPGRWVFRLAPDGTLSAPIRDRVKPNG 176 (296)
T ss_dssp -EEEECS-H--------------------HHH---CGGGS-SCCCCC------SSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred -EEECCc-c--------------------ccc---ccccc-cccccc------CCCcEEEEECCCCCEEEeecCCCCCcc
Confidence 342110 0 000 00000 000000 013578888887766655432 24468
Q ss_pred eeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-CceE----EEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLV----RELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 180 ~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
++|||||+.+ +.... ...|+++++. .++. +.+ .. .. .....+.++++|.
T Consensus 177 i~~s~dg~~l-v~~~~------------~~~i~~~~~~~~g~~~~~~~~~-~~--~~----------~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 177 LAFLPSGNLL-VSDTG------------DNATHRYCLNARGETEYQGVHF-TV--EP----------GKTDGLRVDAGGL 230 (296)
T ss_dssp EEECTTSCEE-EEETT------------TTEEEEEEECSSSCEEEEEEEE-CC--SS----------SCCCSEEEBTTSC
T ss_pred EEECCCCCEE-EEeCC------------CCeEEEEEECCCCcCcCCCeEe-eC--CC----------CCCCeEEECCCCC
Confidence 9999999998 66432 2368888875 3332 222 21 00 1123578888886
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceee-cCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW-CDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~w-spDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
|+.. . .+.+.+++. ++.....+..... ...+.| +||+..|+.... ..||++++.+
T Consensus 231 --l~v~-~------------~~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~ 286 (296)
T 3e5z_A 231 --IWAS-A------------GDGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNV 286 (296)
T ss_dssp --EEEE-E------------TTEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSC
T ss_pred --EEEE-c------------CCeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEccc
Confidence 4333 1 234666675 4322223332223 667788 588876655442 1799999877
Q ss_pred C
Q 007140 334 K 334 (616)
Q Consensus 334 ~ 334 (616)
+
T Consensus 287 ~ 287 (296)
T 3e5z_A 287 R 287 (296)
T ss_dssp C
T ss_pred c
Confidence 3
No 174
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=98.28 E-value=1.8e-07 Score=104.33 Aligned_cols=59 Identities=15% Similarity=-0.066 Sum_probs=44.2
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHH---------------cCCccCCceEEEee
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR---------------RGVGLPILYLNTTA 609 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~---------------~~~vD~~ri~~~~~ 609 (616)
..++||++||+|+. |+| |+.+-+..+ ..++..+.+|+.++++||.+ +++ +.+|||+.+.
T Consensus 273 ~~~~la~~GYaVv~~D~R-G~G~S~G~~--~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~-~~grVgl~G~ 347 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGV-GTRSSDGFQ--TSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASW-ANGKVAMTGK 347 (763)
T ss_dssp HHHHHHTTTCEEEEECCT-TSTTSCSCC--CTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTT-EEEEEEEEEE
T ss_pred hHHHHHHCCCEEEEECCC-cCCCCCCcC--CCCCHHHHHHHHHHHHHHhhcccccccccccccccccC-CCCcEEEEEE
Confidence 35899999999999 999 864433222 34455789999999999984 343 4579998874
No 175
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.27 E-value=0.00013 Score=72.68 Aligned_cols=77 Identities=8% Similarity=0.001 Sum_probs=51.6
Q ss_pred eeEEeecCCCCCCCC----ceeeecCCCCCcccceEEccCCC-eEEEEEeeccccccCCCceeEEEEEC-CCCceEeccc
Q 007140 6 GIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA-ETGEAKPLFE 79 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~----~~~lt~~~~~~~~~~~~~SPDG~-~iaf~~~~~~~~~~~~~~~~l~v~~~-~~g~~~~lt~ 79 (616)
.|.|-++.. ++ .+.+.... ..+..+.|+|||+ .|+.... ...|.++++ .+++...+..
T Consensus 34 ~v~iw~~~~----~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 34 SLTVYKFDI----QAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGTV----------QGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp EEEEEEEET----TTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEET----------TSCEEEECSSSSSSEEECBS
T ss_pred eEEEEEeCC----CCccccceeeeecC--CceEEEEECCCCCcEEEEEcC----------CCeEEEEEeccCCceEeccc
Confidence 355666643 44 44443222 2588999999999 7776542 357888899 8888877754
Q ss_pred --CCCccccccccceEEecCCcEEEEE
Q 007140 80 --SPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 80 --~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
... .+..+.|+| ++.|+..
T Consensus 98 ~~~~~-----~v~~l~~~~-~~~l~s~ 118 (342)
T 1yfq_A 98 NEANL-----GICRICKYG-DDKLIAA 118 (342)
T ss_dssp CCCCS-----CEEEEEEET-TTEEEEE
T ss_pred cCCCC-----ceEEEEeCC-CCEEEEE
Confidence 332 266899999 8877664
No 176
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.27 E-value=0.00017 Score=71.07 Aligned_cols=247 Identities=9% Similarity=0.036 Sum_probs=123.0
Q ss_pred CCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCC
Q 007140 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (616)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (616)
.+.++|.. .......|.|+|||+.|+|+.. ....|++++. +|+.+.+..... . ...+.|++||
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~---------~~~~i~~~~~-~g~~~~~~~~~~-~----~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSDL---------VGRRVLGWRE-DGTVDVLLDATA-F----TNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEET---------TTTEEEEEET-TSCEEEEEESCS-C----EEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEEC---------CCCEEEEEeC-CCCEEEEeCCCC-c----cceeeECCCC
Confidence 45666652 2224568999999999888753 3467899998 455555543322 1 4578899999
Q ss_pred cEEEEEecCCCCCCCCCcccCCCCeeeecC--ccccchhccccccccCCCcccceeE-----------------eccceE
Q 007140 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNE--QKNIIISRMTDNLLKDEYDESLFDY-----------------YTTAQL 159 (616)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~~~~-----------------~~~~~l 159 (616)
+.++.. ........ .. ++|....... .+... ....++...+....++.. .....|
T Consensus 98 ~l~v~~-~~~~~v~~--~~-~~g~~~~~~~~~~~~~~--~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 98 RLVHCE-HGRRAITR--SD-ADGQAHLLVGRYAGKRL--NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp CEEEEE-TTTTEEEE--EC-TTSCEEEEECEETTEEC--SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred CEEEEE-CCCCEEEE--EC-CCCCEEEEEeccCCCcc--CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeE
Confidence 854442 11110000 00 0111110000 00000 000010000101111110 013579
Q ss_pred EEEeC-CCCeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE---EEecCCCCCCCCCc
Q 007140 160 VLGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAEDIPV 235 (616)
Q Consensus 160 ~~~d~-~g~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~ 235 (616)
|+++. +|+.+.+........++|||||+.|++....... .....|+++++.++.. +.+.... ..
T Consensus 172 ~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~-------~~~~~i~~~~~~~~~l~~~~~~~~~~--~~--- 239 (305)
T 3dr2_A 172 YRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQG-------HGSVEITAFAWRDGALHDRRHFASVP--DG--- 239 (305)
T ss_dssp EEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC----------CCCEEEEEEEETTEEEEEEEEECCS--SS---
T ss_pred EEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcC-------CCCCEEEEEEecCCCccCCeEEEECC--CC---
Confidence 99999 6776665511233578999999999887543100 0024788888765431 2222210 00
Q ss_pred cccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEE
Q 007140 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (616)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~ 315 (616)
....+.+.++|. | |+.. .+.+++++. ++.....+. .......+.|++|+..|+.
T Consensus 240 -------~pdgi~~d~~G~--l-wv~~------------~~gv~~~~~---~g~~~~~~~-~~~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 240 -------LPDGFCVDRGGW--L-WSSS------------GTGVCVFDS---DGQLLGHIP-TPGTASNCTFDQAQQRLFI 293 (305)
T ss_dssp -------CCCSEEECTTSC--E-EECC------------SSEEEEECT---TSCEEEEEE-CSSCCCEEEECTTSCEEEE
T ss_pred -------CCCeEEECCCCC--E-EEec------------CCcEEEECC---CCCEEEEEE-CCCceeEEEEeCCCCEEEE
Confidence 012466777776 3 4411 234666665 432222332 2234667889988876555
Q ss_pred eeeccCccEEEEEEeC
Q 007140 316 ETWYKTSQTRTWLVCP 331 (616)
Q Consensus 316 ~~~~~~~~~~l~~~d~ 331 (616)
.... .||.+++
T Consensus 294 t~~~-----~l~~~~~ 304 (305)
T 3dr2_A 294 TGGP-----CLWMLPL 304 (305)
T ss_dssp EETT-----EEEEEEC
T ss_pred EcCC-----eEEEEEC
Confidence 4321 6887765
No 177
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=98.26 E-value=3e-06 Score=84.51 Aligned_cols=102 Identities=15% Similarity=0.078 Sum_probs=73.1
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh-hCCeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la-~~Gy~V 558 (616)
+..+.+++.+.||.+|.+++|+|.+ + +.|+||++|++ +.+.++...| . .....|+ ..||+|
T Consensus 58 ~~~~~~~i~~~~G~~i~~~~~~P~~----~--~~p~vv~~HGg--------G~~~g~~~~~---~-~~~~~la~~~g~~v 119 (317)
T 3qh4_A 58 VAVADDVVTGEAGRPVPVRIYRAAP----T--PAPVVVYCHAG--------GFALGNLDTD---H-RQCLELARRARCAV 119 (317)
T ss_dssp CEEEEEEEECTTSCEEEEEEEECSC----S--SEEEEEEECCS--------TTTSCCTTTT---H-HHHHHHHHHHTSEE
T ss_pred ceEEEEEecCCCCCeEEEEEEecCC----C--CCcEEEEECCC--------cCccCChHHH---H-HHHHHHHHHcCCEE
Confidence 4778899999999999999999976 1 34999999432 1111111122 1 3345566 569999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc---CCccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~---~~vD~~ri~~~~ 608 (616)
+. ||| ++.++. |. ..++|+.++++||.+. --+|++||+|.+
T Consensus 120 v~~dyr-~~p~~~--~p------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G 164 (317)
T 3qh4_A 120 VSVDYR-LAPEHP--YP------AALHDAIEVLTWVVGNATRLGFDARRLAVAG 164 (317)
T ss_dssp EEECCC-CTTTSC--TT------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred EEecCC-CCCCCC--Cc------hHHHHHHHHHHHHHhhHHhhCCCcceEEEEE
Confidence 99 999 875532 22 4688999999999886 347999999986
No 178
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.26 E-value=0.00027 Score=76.73 Aligned_cols=201 Identities=10% Similarity=0.009 Sum_probs=113.0
Q ss_pred ccceEEcc--CCCeEEEEEeeccccccCCCceeEEEEECCCC------ceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 33 INFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETG------EAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 33 ~~~~~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g------~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
+..+.||| ||++||.... ...|.++++.++ +.+.+..... ....+..+.|+||++.|+..
T Consensus 67 v~~~~~sp~~~~~~l~s~~~----------dg~v~vw~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDE----------SGKVIVWGWTFDKESNSVEVNVKSEFQV--LAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EEEEEECSSTTCCEEEEEET----------TSEEEEEEEEEEGGGTEEEEEEEEEEEC--CSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecC----------CCEEEEEeCCCCcccccccccccchhhc--ccccEEEEEEeCCCCEEEEe
Confidence 78899999 9998887653 245667777554 2222211110 01126689999999988875
Q ss_pred ecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCeeecC-CCCceeeeeEC
Q 007140 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFG-TPAVYTAVEPS 183 (616)
Q Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~~~l~-~~~~~~~~~~S 183 (616)
..+. + ....|+++|.......+. ....+..++|+
T Consensus 135 ~~~~--------------------------------------~-------~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 135 GEGR--------------------------------------D-------NFGVFISWDSGNSLGEVSGHSQRINACHLK 169 (615)
T ss_dssp ECCS--------------------------------------S-------CSEEEEETTTCCEEEECCSCSSCEEEEEEC
T ss_pred ccCC--------------------------------------C-------CccEEEEEECCCcceeeecCCccEEEEEEC
Confidence 2110 0 013455555222233333 23356789999
Q ss_pred CCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecC-CCceEEEEE
Q 007140 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD-KPSTLYWVE 261 (616)
Q Consensus 184 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd-g~~~l~~~~ 261 (616)
|+++.++++.... ..+.+||+..++. ..+...... ......+.|+|+ ++. |+..
T Consensus 170 ~~~~~~l~~~~~d------------~~v~vwd~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~-l~~~- 225 (615)
T 1pgu_A 170 QSRPMRSMTVGDD------------GSVVFYQGPPFKFSASDRTHHKQ----------GSFVRDVEFSPDSGEF-VITV- 225 (615)
T ss_dssp SSSSCEEEEEETT------------TEEEEEETTTBEEEEEECSSSCT----------TCCEEEEEECSTTCCE-EEEE-
T ss_pred CCCCcEEEEEeCC------------CcEEEEeCCCcceeeeecccCCC----------CceEEEEEECCCCCCE-EEEE-
Confidence 9998544443322 3688999876543 333321000 001235889999 873 3322
Q ss_pred eecCCCcccccCCCceeEeccCCCCCCCCceEec-----cccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-----KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~-----~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
. ....+.+|+. ..++..... .....+..+.|+ |+..|+.... ++ .|.++|+.+
T Consensus 226 ~-----------~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~--d~--~i~~wd~~~ 283 (615)
T 1pgu_A 226 G-----------SDRKISCFDG---KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA--DA--TIRVWDVTT 283 (615)
T ss_dssp E-----------TTCCEEEEET---TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET--TS--EEEEEETTT
T ss_pred e-----------CCCeEEEEEC---CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC--CC--cEEEEECCC
Confidence 1 2245667776 444443322 334556778999 8887666542 12 577777776
No 179
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.00053 Score=67.10 Aligned_cols=258 Identities=10% Similarity=0.018 Sum_probs=128.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....| |||++|+.... ...|.++++.+++........... +..+.|+|+++.|+....+..-.
T Consensus 20 ~v~~~~~-~~~~~l~s~~~----------dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSR----------DGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CEEEEEE-EETTEEEEEET----------TSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEETTSCEE
T ss_pred CcEEEEe-cCCCEEEEEEc----------CCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEecCCCeEE
Confidence 4778899 99998776542 357788888887654443332222 66899999999888764332100
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecC-CCCceeeeeECC-CCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TPAVYTAVEPSP-DQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~-~~~~~~~~~~Sp-Dg~~ 188 (616)
.-.......+....... +.. ..+.. +.. .............+.++| .+ ....+. ....+..+.|+| +++.
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~---~~i~~-~~~-~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLI-GHQ---GNVCS-LSF-QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp EEETTCCTTSCC-CEEC-CCS---SCEEE-EEE-ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred EEEeeecCCCCcccchh-hcc---cCEEE-EEe-cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCE
Confidence 00000000000000000 000 00000 000 001111111344566666 33 222332 233456788887 8888
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
++....+ ..+.+||.. +....+.... ......+.|+|++. ++..
T Consensus 158 l~~~~~d-------------~~i~i~d~~-~~~~~~~~~~------------~~~i~~~~~~~~~~--~~~~-------- 201 (313)
T 3odt_A 158 FLTASAD-------------KTIKLWQND-KVIKTFSGIH------------NDVVRHLAVVDDGH--FISC-------- 201 (313)
T ss_dssp EEEEETT-------------SCEEEEETT-EEEEEECSSC------------SSCEEEEEEEETTE--EEEE--------
T ss_pred EEEEECC-------------CCEEEEecC-ceEEEEeccC------------cccEEEEEEcCCCe--EEEc--------
Confidence 8777543 257888833 2333322100 01123578999986 3322
Q ss_pred ccccCCCceeEeccCCCCCCCCceE-eccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccc
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 347 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~ 347 (616)
.....+.+|+. ..++... +.........+.|+||+. |+.... ++ .|.++|+.++ +....+.....
T Consensus 202 ----~~dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~--dg--~v~iwd~~~~--~~~~~~~~~~~ 267 (313)
T 3odt_A 202 ----SNDGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGE--DR--TVRIWSKENG--SLKQVITLPAI 267 (313)
T ss_dssp ----ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSC-EEEEET--TS--EEEEECTTTC--CEEEEEECSSS
T ss_pred ----cCCCeEEEEEC---CchhhhhhhhcCCceEEEEEEecCCC-EEEEec--CC--EEEEEECCCC--ceeEEEeccCc
Confidence 12345677776 4444433 333455677899999995 444331 23 6888888773 32222221110
Q ss_pred cccCCCCCCCeeeCCCCCEE
Q 007140 348 NVYSDPGSPMMTRTSTGTNV 367 (616)
Q Consensus 348 ~~~~~~g~~~~~~s~dgk~l 367 (616)
.. ..+.|+++|+.+
T Consensus 268 -~i-----~~~~~~~~~~~~ 281 (313)
T 3odt_A 268 -SI-----WSVDCMSNGDII 281 (313)
T ss_dssp -CE-----EEEEECTTSCEE
T ss_pred -eE-----EEEEEccCCCEE
Confidence 01 128899999843
No 180
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.23 E-value=0.00058 Score=67.22 Aligned_cols=149 Identities=11% Similarity=0.046 Sum_probs=77.9
Q ss_pred ceEEEEeCCCCeeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCc
Q 007140 157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (616)
Q Consensus 157 ~~l~~~d~~g~~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (616)
..|++++.+|+.+.+... .....++++|||+.+ +.... ...|++++.++. .+.+..... ..+
T Consensus 67 ~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~-v~~~~------------~~~v~~~~~~g~-~~~~~~~~~--~~~- 129 (305)
T 3dr2_A 67 RRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLV-HCEHG------------RRAITRSDADGQ-AHLLVGRYA--GKR- 129 (305)
T ss_dssp TEEEEEETTSCEEEEEESCSCEEEEEECTTSCEE-EEETT------------TTEEEEECTTSC-EEEEECEET--TEE-
T ss_pred CEEEEEeCCCCEEEEeCCCCccceeeECCCCCEE-EEECC------------CCEEEEECCCCC-EEEEEeccC--CCc-
Confidence 356677776655544322 345688999999844 44322 136888888744 444432100 000
Q ss_pred cccCccCCCCcceeecCCCceEEEEEeecC------CCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCC
Q 007140 236 CYNSVREGMRSISWRADKPSTLYWVEAQDR------GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDD 309 (616)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspD 309 (616)
......+.+.|||+ |++....-+ +...........++.++. ++++.+.+. .......+.|+||
T Consensus 130 -----~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 130 -----LNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp -----CSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEEEEEECTT
T ss_pred -----cCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCcceEEcCC
Confidence 01123578899987 554310000 000000011246777776 556776655 3333456889999
Q ss_pred CceEEEeeecc--CccEEEEEEeCCC
Q 007140 310 SLALVNETWYK--TSQTRTWLVCPGS 333 (616)
Q Consensus 310 g~~l~~~~~~~--~~~~~l~~~d~~~ 333 (616)
++.|+...... .+..+|+++++++
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecC
Confidence 98654433211 0124799998875
No 181
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.23 E-value=0.00025 Score=71.63 Aligned_cols=227 Identities=7% Similarity=-0.066 Sum_probs=108.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+...+|||||+.||.-. +. .+.++++.+++......... .....|+++++.++++.......
T Consensus 21 ~V~~v~fs~dg~~la~g~---------~~--~~~iw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILST---------LK--SFEIYNVHPVAHIMSQEMRH------LSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp CCCEEEECTTSSEEEEEC---------SS--EEEEEEETTEEEEEEEECSC------CCEEEECTTSSEEEEECSSTTEE
T ss_pred ceEEEEECCCCCEEEEEc---------CC--EEEEEecCCcceeeeeecCC------eEEEEEcCCCCEEEEEECCccEE
Confidence 588999999999887543 12 24466776665433221111 45677888888776653221100
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC-C-eeecCCCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-T-AKDFGTPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g-~-~~~l~~~~~~~~~~~SpDg~~ 188 (616)
.......+..+...... .. +.. +. .............+.++|+ ++ + ...+.. .....+++| +.
T Consensus 84 --~iWd~~~~~~~~~~~~~----~~-v~~-v~--~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~ 149 (355)
T 3vu4_A 84 --HIWDDVKKQDVSRIKVD----AP-VKD-LF--LSREFIVVSYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GL 149 (355)
T ss_dssp --EEEETTTTEEEEEEECS----SC-EEE-EE--ECSSEEEEEETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TE
T ss_pred --EEEECCCCcEEEEEECC----Cc-eEE-EE--EcCCEEEEEEcCEEEEEECCCCceeeEEecc--CCceEEEEc--cE
Confidence 00000111111000000 00 000 00 0011111123456777887 33 2 112211 223456676 66
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCce-----------------EEEecCCCCCCCCCccccCccCCCCcceeec
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-----------------VRELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (616)
+++.+... ...|.+||+..+. ...+.. .......+.|+|
T Consensus 150 la~~sg~~-----------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-------------h~~~v~~~~~s~ 205 (355)
T 3vu4_A 150 LVYSNEFN-----------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-------------HTNPIKMVRLNR 205 (355)
T ss_dssp EEEEESSC-----------TTCEEEEECCC------------------CCEEECC-------------CSSCEEEEEECT
T ss_pred EEEeCCCc-----------CcEEEEEECCCCCccccccccccccccCcccEEEEc-------------cCCceEEEEECC
Confidence 77652211 2368899987543 222211 111134588999
Q ss_pred CCCceEEEEEeecCCCcccccCCCce-eEeccCCCCCCCCceE-ec-c-ccccccceeecCCCceEEEeeeccCccEEEE
Q 007140 252 DKPSTLYWVEAQDRGDANVEVSPRDI-IYTQPAEPAEGEKPEI-LH-K-LDLRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (616)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~-l~-~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~ 327 (616)
||+. |+-. ..... +.+|+. ..++... +. . ....+..+.|+|||..|+.... ++ .|.
T Consensus 206 ~g~~-l~s~------------s~d~~~v~iwd~---~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~--d~--~v~ 265 (355)
T 3vu4_A 206 KSDM-VATC------------SQDGTIIRVFKT---EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD--KW--TLH 265 (355)
T ss_dssp TSSE-EEEE------------ETTCSEEEEEET---TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET--TC--EEE
T ss_pred CCCE-EEEE------------eCCCCEEEEEEC---CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC--CC--EEE
Confidence 9973 3221 12233 677777 5444433 43 1 4456778999999998776542 23 455
Q ss_pred EEeCCC
Q 007140 328 LVCPGS 333 (616)
Q Consensus 328 ~~d~~~ 333 (616)
+.|+..
T Consensus 266 iw~~~~ 271 (355)
T 3vu4_A 266 VFEIFN 271 (355)
T ss_dssp EEESSC
T ss_pred EEEccC
Confidence 555544
No 182
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.22 E-value=0.0012 Score=64.65 Aligned_cols=250 Identities=12% Similarity=0.071 Sum_probs=128.1
Q ss_pred eEEeecCCCCCCCCceeeecCCCCC-cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~-~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
|.|=++.. |+..++..+.... .+....|+|||++||--+. ...|.++++++++..+......
T Consensus 47 V~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~----------Dg~v~iw~~~~~~~~~~~~~h~--- 109 (318)
T 4ggc_A 47 VYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHS--- 109 (318)
T ss_dssp EEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCS---
T ss_pred EEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC----------CCcEEEeecCCceeEEEecCcc---
Confidence 55556643 7665543233322 4788999999998875442 3577888999887544332221
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-
Q 007140 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~- 164 (616)
.....++++++.|+..... ..+...+.
T Consensus 110 ---~~~~~~~~~~~~l~s~~~~-------------------------------------------------~~~~~~~~~ 137 (318)
T 4ggc_A 110 ---ARVGSLSWNSYILSSGSRS-------------------------------------------------GHIHHHDVR 137 (318)
T ss_dssp ---SCEEEEEEETTEEEEEETT-------------------------------------------------SEEEEEETT
T ss_pred ---ceEEEeecCCCEEEEEecC-------------------------------------------------CceEeeecC
Confidence 1234566677765553111 11222222
Q ss_pred CC-C-eeec-CCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEE--ecCCCCCCCCCccccC
Q 007140 165 DG-T-AKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCYNS 239 (616)
Q Consensus 165 ~g-~-~~~l-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--l~~~~~~~~~~~~~~~ 239 (616)
.+ . ...+ ..........++++|+.|+....+ ..+.+||+..++... +.... .
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~----------~ 194 (318)
T 4ggc_A 138 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQTFT----------Q 194 (318)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSEEEC----------C
T ss_pred CCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCcccccceeeec----------c
Confidence 11 1 1112 223345678999999988876543 257888886543111 00000 0
Q ss_pred ccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeec
Q 007140 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (616)
Q Consensus 240 ~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~ 319 (616)
.........|+|++...+... . . .....+.+++. ..+................|++++..++.....
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~-~-~--------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATG-G-G--------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEE-E-C--------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceEEEEecCCCCcEEEEE-e-c--------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEc
Confidence 001122466788776533222 1 1 11234455554 333333333334455677899998876544322
Q ss_pred cCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 320 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 320 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.++ .|.++|+.++ +....+..... .+ ..++|+|||+.|+...
T Consensus 262 ~d~--~i~iwd~~~~--~~~~~l~gH~~-~V-----~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 262 AQN--QLVIWKYPTM--AKVAELKGHTS-RV-----LSLTMSPDGATVASAA 303 (318)
T ss_dssp TTC--CEEEEETTTC--CEEEEECCCSS-CE-----EEEEECTTSSCEEEEE
T ss_pred CCC--EEEEEECCCC--cEEEEEcCCCC-CE-----EEEEEcCCCCEEEEEe
Confidence 223 4777788773 22222221111 11 1288999999766443
No 183
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.21 E-value=0.00019 Score=71.20 Aligned_cols=58 Identities=7% Similarity=0.084 Sum_probs=37.5
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc--eEec---ccCCCccccccccceEEec--CCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPL---FESPDICLNAVFGSFVWVN--NSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~--~~~l---t~~~~~~~~~~~~~~~wsp--dg~~l~~~ 104 (616)
.+....|||||++||.... ...|.++++.++. .+.+ ..... .+..+.|+| |++.|+..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSS----------DQHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred ceeEEEEcCCCCEEEEeeC----------CCeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 4788999999998876542 2466677777542 1222 11211 266889998 68877764
No 184
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=98.17 E-value=4.7e-06 Score=81.53 Aligned_cols=102 Identities=12% Similarity=0.007 Sum_probs=72.7
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~ 560 (616)
..+.++++. ||.+|.++++.|. +.|+||++++.. +....| . ...+.|+++||.|+.
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~-----------~~~~~~---~-~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWG-----------GSQHHS---L-VRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTT-----------CCTTTT---H-HHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCC-----------CCcCcH---H-HHHHHHHHCCCEEEE
Confidence 456788876 8999999999997 128888883310 001122 1 446789999999999
Q ss_pred -CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 561 -GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 561 -n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|+| |.......+.... -....+|+.+++++|.+++.+|++||++.+
T Consensus 61 ~d~~-G~g~s~~~~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G 107 (290)
T 3ksr_A 61 FDLR-GHEGYASMRQSVT-RAQNLDDIKAAYDQLASLPYVDAHSIAVVG 107 (290)
T ss_dssp CCCT-TSGGGGGGTTTCB-HHHHHHHHHHHHHHHHTSTTEEEEEEEEEE
T ss_pred eecC-CCCCCCCCccccc-HHHHHHHHHHHHHHHHhcCCCCccceEEEE
Confidence 999 8544433222212 245679999999999999999999998876
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.17 E-value=0.00039 Score=69.22 Aligned_cols=232 Identities=12% Similarity=0.037 Sum_probs=121.9
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLN 86 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~ 86 (616)
|++.+.. +++.+.+.. .....+..+.|+|||+.++...... .....|++++.++++.+.+...... .
T Consensus 68 i~~~d~~----~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~--~ 134 (333)
T 2dg1_A 68 IFKINPE----TKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDF------KSTGGIFAATENGDNLQDIIEDLST--A 134 (333)
T ss_dssp EEEECTT----TCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTS------SSCCEEEEECTTSCSCEEEECSSSS--C
T ss_pred EEEEeCC----CCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCC------CCCceEEEEeCCCCEEEEEEccCcc--C
Confidence 4554443 366666542 1222477889999998544332100 1225899999998876633221110 1
Q ss_pred ccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC-
Q 007140 87 AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD- 165 (616)
Q Consensus 87 ~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~- 165 (616)
.....+.++|||+.++.. .. +. . .+ ....||+++..
T Consensus 135 ~~~~~i~~d~~g~l~v~~-~~----------------------~~-------~------~~-------~~~~l~~~~~~~ 171 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTD-FR----------------------GY-------S------TN-------PLGGVYYVSPDF 171 (333)
T ss_dssp CCEEEEEECTTSCEEEEE-CC----------------------CB-------T------TB-------CCEEEEEECTTS
T ss_pred CcccceEECCCCCEEEEe-cc----------------------cc-------c------cC-------CCceEEEEeCCC
Confidence 124577899999743332 10 00 0 00 13578888884
Q ss_pred CCeeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC--CceEEEe-----cCCCCCCCCCccc
Q 007140 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVREL-----CDLPPAEDIPVCY 237 (616)
Q Consensus 166 g~~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l-----~~~~~~~~~~~~~ 237 (616)
++.+.+... .....++|+|||+.|++..... ..|+++++. ++....+ .....
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~------------~~i~~~d~~~~g~~~~~~~~~~~~~~~~-------- 231 (333)
T 2dg1_A 172 RTVTPIIQNISVANGIALSTDEKVLWVTETTA------------NRLHRIALEDDGVTIQPFGATIPYYFTG-------- 231 (333)
T ss_dssp CCEEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEECTTSSSEEEEEEEEEEECCS--------
T ss_pred CEEEEeecCCCcccceEECCCCCEEEEEeCCC------------CeEEEEEecCCCcCcccccceEEEecCC--------
Confidence 465554321 2345789999999988875432 368888874 3333221 11100
Q ss_pred cCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccc------cccceeecCCCc
Q 007140 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFRSVSWCDDSL 311 (616)
Q Consensus 238 ~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~------~~~~~~wspDg~ 311 (616)
......+.++++|. | |+... ....+++++. ++.....+..... ....+.|+||+.
T Consensus 232 ---~~~~~~i~~d~~G~--l-~v~~~----------~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 232 ---HEGPDSCCIDSDDN--L-YVAMY----------GQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp ---SSEEEEEEEBTTCC--E-EEEEE----------TTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred ---CCCCCceEECCCCC--E-EEEEc----------CCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCCC
Confidence 00122467788876 4 33221 1234566665 4322233321111 356788999986
Q ss_pred eEEEeeecc--CccEEEEEEeCCC
Q 007140 312 ALVNETWYK--TSQTRTWLVCPGS 333 (616)
Q Consensus 312 ~l~~~~~~~--~~~~~l~~~d~~~ 333 (616)
.|+...... .....||.+++..
T Consensus 293 ~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 293 QLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEEEEEECGGGTCCEEEEEEECSS
T ss_pred EEEEEeCccCCCCCceEEEEeccc
Confidence 554332211 2235789888765
No 186
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.15 E-value=0.0014 Score=64.90 Aligned_cols=194 Identities=12% Similarity=0.008 Sum_probs=104.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
.+....|||||+.|+.... ...|.+++...+............ .....|+++++.|+....+
T Consensus 88 ~V~~~~~s~dg~~l~s~~~----------d~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~s~d---- 149 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSW----------DGTLRLWDLTTGTTTRRFVGHTKD----VLSVAFSSDNRQIVSGSRD---- 149 (340)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEETT----
T ss_pred CEEEEEECCCCCEEEEEcc----------cccceEEeecccceeeeecCCCCc----eeEEEEeecCccceeecCC----
Confidence 4778899999998776542 356778888776544433222211 3456778888876653211
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-Ce-ee-c-CCCCceeeeeECCCCc
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TA-KD-F-GTPAVYTAVEPSPDQK 187 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~-~~-l-~~~~~~~~~~~SpDg~ 187 (616)
..+.++|+.+ .. .. + .....+..++|++++.
T Consensus 150 ---------------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 150 ---------------------------------------------KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp ---------------------------------------------SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred ---------------------------------------------CeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 1233444422 11 11 1 1123456788999875
Q ss_pred EEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCC
Q 007140 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (616)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (616)
..++.+... ...+.+||+..++. ..+... ......+.|+||++. |+ ...
T Consensus 185 ~~~~~s~~~-----------d~~i~i~d~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~~-l~-s~s---- 234 (340)
T 4aow_A 185 NPIIVSCGW-----------DKLVKVWNLANCKLKTNHIGH-------------TGYLNTVTVSPDGSL-CA-SGG---- 234 (340)
T ss_dssp SCEEEEEET-----------TSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSE-EE-EEE----
T ss_pred CcEEEEEcC-----------CCEEEEEECCCCceeeEecCC-------------CCcEEEEEECCCCCE-EE-EEe----
Confidence 433332211 13588899876543 333221 011235789999973 22 211
Q ss_pred CcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
....+.+|+. ..++.............+.|+|++..++.... + .|.++|+.+
T Consensus 235 -------~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d---~--~i~iwd~~~ 286 (340)
T 4aow_A 235 -------KDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAATG---P--SIKIWDLEG 286 (340)
T ss_dssp -------TTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEET---T--EEEEEETTT
T ss_pred -------CCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccCC---C--EEEEEECCC
Confidence 2235666676 43222222223344567889999876555431 2 566777766
No 187
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00031 Score=70.40 Aligned_cols=167 Identities=10% Similarity=0.058 Sum_probs=92.1
Q ss_pred ceEEEEeC-CCC-eeecC--CCCceeeeeECC--CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCC
Q 007140 157 AQLVLGSL-DGT-AKDFG--TPAVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (616)
Q Consensus 157 ~~l~~~d~-~g~-~~~l~--~~~~~~~~~~Sp--Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 230 (616)
..+.++++ +++ .+.+. ....+..++|+| +++.++....+ ..+.+||+.+++...+.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-------------g~i~~wd~~~~~~~~~~~~~~- 169 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-------------GTIGFQSYEDDSQYIVHSAKS- 169 (343)
T ss_dssp TEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-------------CCEEEEESSSSCEEEEECCCS-
T ss_pred CceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-------------CcEEEEECCCCcEEEEEecCC-
Confidence 45566676 444 33332 223567899999 99988877643 368899998665533322110
Q ss_pred CCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce--Eecc-ccccccceeec
Q 007140 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE--ILHK-LDLRFRSVSWC 307 (616)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~l~~-~~~~~~~~~ws 307 (616)
......+.|+|||.. | ... .....+.+|+. ..++.. .+.. ....+..+.|+
T Consensus 170 ----------~~~i~~~~~~pdg~~-l-asg-----------~~dg~i~iwd~---~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 170 ----------DVEYSSGVLHKDSLL-L-ALY-----------SPDGILDVYNL---SSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp ----------SCCCCEEEECTTSCE-E-EEE-----------CTTSCEEEEES---SCTTSCCEECCCCTTSCEEEEEEC
T ss_pred ----------CCceEEEEECCCCCE-E-EEE-----------cCCCEEEEEEC---CCCCCCccEEeccCCCCEEEEEEe
Confidence 011345889999972 2 221 12345666776 444433 3433 34567789999
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
|||..|+... . + .|.+.|+.... ....+..... ..... +...++|+|+|++++...
T Consensus 224 ~~g~~l~s~~-~--~--~v~iwd~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 224 DNGYWMVVEC-D--Q--TVVCFDLRKDV-GTLAYPTYTI-PEFKT-GTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TTSSEEEEEE-S--S--BEEEEETTSST-TCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEe-C--C--eEEEEEcCCCC-cceeeccccc-ccccc-cceEEEECCCCCEEEEec
Confidence 9999877655 2 2 46677887632 1111111000 00000 001288999999887654
No 188
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.12 E-value=0.0052 Score=60.05 Aligned_cols=57 Identities=21% Similarity=0.453 Sum_probs=38.4
Q ss_pred cceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 34 ~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
+-+.|||++ .||.-. ...|.+||+.+|+..++...... ...+..+.|+|+|+.|+..
T Consensus 29 ~~l~WS~~~-~lAvg~-----------D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sg 85 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL-----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVG 85 (318)
T ss_dssp BCEEECTTS-EEEEEE-----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEE
T ss_pred eEEEECCCC-EEEEEe-----------CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEE
Confidence 557999997 565432 24688889999987655432211 1125688999999987764
No 189
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.11 E-value=3e-06 Score=90.79 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=69.8
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCcc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPII 567 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~ 567 (616)
+.|.+.+. ||.|.+..++++ +|+|||+|+|.+. .++...| ....+.+.+||+|+. |||.|+.
T Consensus 95 ~edcl~ln--v~~P~~~~~~~~--~Pv~v~iHGG~~~--------~g~~~~~-----~~~~la~~~g~vvv~~nYRlg~~ 157 (542)
T 2h7c_A 95 SEDCLYLN--IYTPADLTKKNR--LPVMVWIHGGGLM--------VGAASTY-----DGLALAAHENVVVVTIQYRLGIW 157 (542)
T ss_dssp ESCCCEEE--EEECSCTTSCCC--EEEEEEECCSTTT--------SCCSTTS-----CCHHHHHHHTCEEEEECCCCHHH
T ss_pred CCCCcEEE--EEECCCCCCCCC--CCEEEEECCCccc--------CCCcccc-----CHHHHHhcCCEEEEecCCCCccc
Confidence 45777775 889988765443 5999999654321 2222222 112333448999999 9999999
Q ss_pred ccCCCccC---ChhHHHHHHHHHHHHHHHHHc---CCccCCceEEEee
Q 007140 568 GEGDKLPN---DRFVEQLVSSAEAAVEEVVRR---GVGLPILYLNTTA 609 (616)
Q Consensus 568 GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~---~~vD~~ri~~~~~ 609 (616)
||+..... +++| +.|+.++++|+.+. --+||+||.|.+-
T Consensus 158 gf~~~~~~~~~~n~g---l~D~~~al~wv~~ni~~fggDp~~Vtl~G~ 202 (542)
T 2h7c_A 158 GFFSTGDEHSRGNWG---HLDQVAALRWVQDNIASFGGNPGSVTIFGE 202 (542)
T ss_dssp HHCCCSSTTCCCCHH---HHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred cCCCCCcccCccchh---HHHHHHHHHHHHHHHHHcCCCccceEEEEe
Confidence 99876543 4554 78999999999765 2389999999863
No 190
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.11 E-value=0.00019 Score=72.03 Aligned_cols=63 Identities=11% Similarity=0.035 Sum_probs=42.3
Q ss_pred cccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEe
Q 007140 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
.+..+.|+| +++.|+.... ...|.++++.+++......... .....+..+.|+|+++.|+...
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSK----------DHALRLWNIQTDTLVAIFGGVE-GHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp CEEEEEECSSCTTEEEEEET----------TSCEEEEETTTTEEEEEECSTT-SCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCCEEEEEeC----------CCeEEEEEeecCeEEEEecccc-cccCceeEEEECCCCCEEEEec
Confidence 588999999 8887766542 3578888998887655431100 0011266899999999887753
No 191
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.10 E-value=0.00024 Score=70.81 Aligned_cols=137 Identities=12% Similarity=0.014 Sum_probs=82.0
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (616)
.|+..+.. +++.+.++ ++. .+..+.|+|||+.++.. . ..|++++.++|+.+.++.......
T Consensus 72 ~i~~~d~~----~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~--~----------~gl~~~d~~~g~~~~~~~~~~~~~ 132 (326)
T 2ghs_A 72 ELHELHLA----SGRKTVHA-LPF--MGSALAKISDSKQLIAS--D----------DGLFLRDTATGVLTLHAELESDLP 132 (326)
T ss_dssp EEEEEETT----TTEEEEEE-CSS--CEEEEEEEETTEEEEEE--T----------TEEEEEETTTCCEEEEECSSTTCT
T ss_pred EEEEEECC----CCcEEEEE-CCC--cceEEEEeCCCeEEEEE--C----------CCEEEEECCCCcEEEEeeCCCCCC
Confidence 35555543 35555554 333 47788999999865543 1 249999999998777654321110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC
Q 007140 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (616)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~ 165 (616)
...+..+.|+|+|+. ++...... .+ .....||+++ +
T Consensus 133 ~~~~~~i~~d~~G~l-~v~~~~~~------------------------------------~~------~~~~~l~~~~-~ 168 (326)
T 2ghs_A 133 GNRSNDGRMHPSGAL-WIGTMGRK------------------------------------AE------TGAGSIYHVA-K 168 (326)
T ss_dssp TEEEEEEEECTTSCE-EEEEEETT------------------------------------CC------TTCEEEEEEE-T
T ss_pred CCCCCCEEECCCCCE-EEEeCCCc------------------------------------CC------CCceEEEEEe-C
Confidence 112457889999984 44311000 00 0135788888 7
Q ss_pred CCeeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC
Q 007140 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (616)
Q Consensus 166 g~~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (616)
|+.+.+... .....++|||||+.|++.... ...|++++++
T Consensus 169 g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~------------~~~I~~~d~~ 209 (326)
T 2ghs_A 169 GKVTKLFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLD 209 (326)
T ss_dssp TEEEEEEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBC
T ss_pred CcEEEeeCCCcccCCeEEcCCCCEEEEEECC------------CCEEEEEEcc
Confidence 766554322 234578999999999887532 2368899875
No 192
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=98.09 E-value=1.1e-05 Score=83.19 Aligned_cols=116 Identities=15% Similarity=0.142 Sum_probs=70.8
Q ss_pred ceeEEEEECCC--C--cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCC---Ccc--CCCCCchHHHH
Q 007140 481 QKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP---NEF--SGMTPTSSLIF 551 (616)
Q Consensus 481 ~~e~i~~~~~D--G--~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~q~l 551 (616)
....|.|++.| | ..+.|+|+.|.+..+.+ +.|+||+.++... +... ..| ........+.|
T Consensus 45 ~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~--~~P~vv~~HG~~~---------~~~~~~~~~~~~~~~~~~~~~~l 113 (397)
T 3h2g_A 45 RVAEFTYATIGVEGEPATASGVLLIPGGERCSG--PYPLLGWGHPTEA---------LRAQEQAKEIRDAKGDDPLVTRL 113 (397)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEECTTCCS--CEEEEEEECCCCC---------BTTCCHHHHHHHTTTCSHHHHTT
T ss_pred EEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCC--CCcEEEEeCCCcC---------CCCcccccccccccchHHHHHHH
Confidence 55566676554 4 46999999999876443 3488888843210 0000 000 00011456889
Q ss_pred hhCCeEEEE-CCCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHc-CCccCCceEEEe
Q 007140 552 LARRFAVLA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRR-GVGLPILYLNTT 608 (616)
Q Consensus 552 a~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~-~~vD~~ri~~~~ 608 (616)
+++||+|+. |+| |..+-+..... ......++.|.+.++..++++ ++.|++||++.+
T Consensus 114 ~~~G~~V~~~D~~-G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G 174 (397)
T 3h2g_A 114 ASQGYVVVGSDYL-GLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSG 174 (397)
T ss_dssp GGGTCEEEEECCT-TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred HHCCCEEEEecCC-CCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEE
Confidence 999999999 999 85433222221 111224566677777777665 888899999876
No 193
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.0004 Score=70.07 Aligned_cols=199 Identities=14% Similarity=0.191 Sum_probs=108.8
Q ss_pred cccceEEccC--CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC--CcEEEEEecC
Q 007140 32 KINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPS 107 (616)
Q Consensus 32 ~~~~~~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~~ 107 (616)
.+..+.|+|+ |+.|+.... ...|.++++.+++...+...... ...+..+.|+|+ ++.|+....
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~- 123 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSY----------DGKVLIWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVASS- 123 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEET----------TSCEEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEET-
T ss_pred cEEEEEeCCCCCCCEEEEecc----------CCEEEEEEcCCCceeEeeeecCC--CcceEEEEeCCCCCCCEEEEecC-
Confidence 4788999988 887766542 24677778877753222211110 112568899999 887766421
Q ss_pred CCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC---eeec-CCCCceeeeeE
Q 007140 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDF-GTPAVYTAVEP 182 (616)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~---~~~l-~~~~~~~~~~~ 182 (616)
...|.++|+ ++. ...+ .....+..++|
T Consensus 124 ------------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 124 ------------------------------------------------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp ------------------------------------------------TSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred ------------------------------------------------CCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 134555666 321 1122 22335678899
Q ss_pred CC-------------CCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-E-EEecCCCCCCCCCccccCccCCCCcc
Q 007140 183 SP-------------DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-V-RELCDLPPAEDIPVCYNSVREGMRSI 247 (616)
Q Consensus 183 Sp-------------Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (616)
+| |++.|+....+ ..|.+||+..+. . ..+..+... ......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~h----------~~~v~~~ 212 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLEGH----------SDWVRDV 212 (379)
T ss_dssp CCCC----------CTTCEEEEEETT-------------SCEEEEEEETTTTEEEEEEEECCC----------SSCEEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCC-------------CeEEEEEecCCCcceeeEEEEecc----------cCcEeEE
Confidence 99 68888877643 258888875332 1 222211100 0112358
Q ss_pred eeecC---CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCC---ceEecc---ccccccceeecCCCceEEEeee
Q 007140 248 SWRAD---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHK---LDLRFRSVSWCDDSLALVNETW 318 (616)
Q Consensus 248 ~wspd---g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~l~~---~~~~~~~~~wspDg~~l~~~~~ 318 (616)
.|+|+ ++ .|+.. . ....+.+|+. ..++ ...+.. .......+.|+|||..|+....
T Consensus 213 ~~sp~~~~~~-~l~s~-~-----------~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 213 AWSPTVLLRS-YLASV-S-----------QDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EECCCCSSSE-EEEEE-E-----------TTSCEEEEEE---SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred EECCCCCCCC-eEEEE-e-----------CCCEEEEEeC---CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 89999 54 23322 1 1234555565 3222 122221 2344567899999998766542
Q ss_pred ccCccEEEEEEeCC
Q 007140 319 YKTSQTRTWLVCPG 332 (616)
Q Consensus 319 ~~~~~~~l~~~d~~ 332 (616)
++..++|.++..
T Consensus 277 --dg~i~iw~~~~~ 288 (379)
T 3jrp_A 277 --DNKVTLWKENLE 288 (379)
T ss_dssp --SSSEEEEEEEET
T ss_pred --CCcEEEEeCCCC
Confidence 355566666543
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.03 E-value=0.0086 Score=59.43 Aligned_cols=228 Identities=7% Similarity=-0.085 Sum_probs=115.7
Q ss_pred ceEEEEeC-CCCe-eecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEE-EecCCCCCCCC
Q 007140 157 AQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~-~g~~-~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~ 233 (616)
..|.++|+ +++. ..+........+++|||| +|+++... ...|.++|..+++.. .+.--.....
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~------------~~~v~~iD~~t~~~~~~i~~g~~~~~- 129 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW------------DYRIFIINPKTYEITGYIECPDMDME- 129 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS------------CSEEEEEETTTTEEEEEEECTTCCTT-
T ss_pred CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC------------CCeEEEEECCCCeEEEEEEcCCcccc-
Confidence 57888898 6754 456433445678899998 66666422 237899999876543 3321100000
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceE
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLAL 313 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l 313 (616)
......+.+ ++. .||.... ...+.+.+++. .+++.............+.++|||+.+
T Consensus 130 -------~~~p~~i~~--~~~-~lyv~~~----------~~~~~v~viD~---~t~~~~~~i~~g~~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 130 -------SGSTEQMVQ--YGK-YVYVNCW----------SYQNRILKIDT---ETDKVVDELTIGIQPTSLVMDKYNKMW 186 (328)
T ss_dssp -------TCBCCCEEE--ETT-EEEEEEC----------TTCCEEEEEET---TTTEEEEEEECSSCBCCCEECTTSEEE
T ss_pred -------CCCcceEEE--ECC-EEEEEcC----------CCCCEEEEEEC---CCCeEEEEEEcCCCccceEEcCCCCEE
Confidence 001223444 333 2433311 01345666676 444433322223344567889999865
Q ss_pred EEeeec-cC-----ccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecC
Q 007140 314 VNETWY-KT-----SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (616)
Q Consensus 314 ~~~~~~-~~-----~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g 387 (616)
+..... .. ....|+++|+++. +........... .| ..++++|||+.+|+... .++
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~---~p--~~la~~~d~~~lyv~~~-------~v~----- 247 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGD---WP--SEVQLNGTRDTLYWINN-------DIW----- 247 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTC---CC--EEEEECTTSCEEEEESS-------SEE-----
T ss_pred EEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCC---Cc--eeEEEecCCCEEEEEcc-------EEE-----
Confidence 543311 00 0147999999873 222111110000 00 12889999999887641 233
Q ss_pred CCCCCCcceeEeeecCCCceee--eeecCCcccceeeEEeecCCCcccccccCCEEEEEe-ecCCCCceEEEEeCCCCc
Q 007140 388 FTPEGNIPFLDLFDINTGSKER--IWESNREKYFETAVALVFGQGEEDINLNQLKILTSK-ESKTEITQYHILSWPLKK 463 (616)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~-ss~~~p~~l~~~~~~~~~ 463 (616)
.+|+++++... +.... ...+.. ..++|+++.+++.. .+......|++++++ |+
T Consensus 248 -----------~~d~~t~~~~~~~~~~~~----~~~p~g-------i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 248 -----------RMPVEADRVPVRPFLEFR----DTKYYG-------LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp -----------EEETTCSSCCSSCSBCCC----SSCEEE-------EEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred -----------EEECCCCceeeeeeecCC----CCceEE-------EEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 46777666421 11100 011222 23566556555443 122346789999877 54
No 195
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.03 E-value=0.00055 Score=67.73 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=36.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEe---cccCCCccccccccceEEec--CCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVN--NSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~---lt~~~~~~~~~~~~~~~wsp--dg~~l~~~ 104 (616)
.+...+|||||++||-.+. + ..|.++++.+++... +..+.. .+..+.|+| +++.|+..
T Consensus 15 ~V~~v~~s~~g~~lasgs~--------D--~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSS--------D--RSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp CEEEEEECGGGCEEEEEET--------T--TEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEE
T ss_pred eEEEeeEcCCCCEEEEEeC--------C--CeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEE
Confidence 4778999999998876542 2 456666777664322 222222 256789986 37766553
No 196
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=98.03 E-value=1.8e-05 Score=78.44 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=72.4
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC-CeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~-Gy~V 558 (616)
...+.+++++.|| ++.+++|.|.+.. + +.|+||++|+|.+ ..++...| . ...+.|+++ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~l~~~~~~P~~~~--~--~~p~vv~~HGGg~--------~~g~~~~~---~-~~~~~la~~~g~~v 108 (310)
T 2hm7_A 46 AEVREFDMDLPGR-TLKVRMYRPEGVE--P--PYPALVYYHGGSW--------VVGDLETH---D-PVCRVLAKDGRAVV 108 (310)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECTTCC--S--SEEEEEEECCSTT--------TSCCTTTT---H-HHHHHHHHHHTSEE
T ss_pred ceEEEEEeccCCC-eEEEEEEecCCCC--C--CCCEEEEECCCcc--------ccCChhHh---H-HHHHHHHHhcCCEE
Confidence 4778889998888 9999999998752 1 3489999843211 11111122 1 345678876 9999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
+. ||| |..++. |. ...+|+.++++||.++. -+|++||+|-+
T Consensus 109 ~~~d~r-g~~~~~--~~------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G 153 (310)
T 2hm7_A 109 FSVDYR-LAPEHK--FP------AAVEDAYDALQWIAERAADFHLDPARIAVGG 153 (310)
T ss_dssp EEECCC-CTTTSC--TT------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEE
T ss_pred EEeCCC-CCCCCC--CC------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEE
Confidence 99 999 865432 22 46789999999999874 37889998876
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.02 E-value=0.0017 Score=64.66 Aligned_cols=223 Identities=11% Similarity=-0.028 Sum_probs=116.8
Q ss_pred cCCCeEEEEEeeccccccCCCceeEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccc
Q 007140 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMV 118 (616)
Q Consensus 40 PDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 118 (616)
.++++|..+.. ....|.++|+++++. ..+..... ...+.+++|+ .|++...
T Consensus 51 ~~~~~lyv~~~---------~~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g-~lyv~~~------------ 102 (328)
T 3dsm_A 51 IRDGIGWIVVN---------NSHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDE-KAYVTQI------------ 102 (328)
T ss_dssp EETTEEEEEEG---------GGTEEEEEETTTCCEEEEEECCSS------EEEEEEEETT-EEEEEEB------------
T ss_pred EECCEEEEEEc---------CCCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCC-eEEEEEC------------
Confidence 35676555542 346899999999886 44421111 4567888888 4544310
Q ss_pred CCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee-ecCCCC------ceeeeeECCCCcEEE
Q 007140 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVL 190 (616)
Q Consensus 119 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~-~l~~~~------~~~~~~~SpDg~~i~ 190 (616)
....|+++|+ ++++. .+..+. ....+++ ++++|+
T Consensus 103 ------------------------------------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~ly 144 (328)
T 3dsm_A 103 ------------------------------------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVY 144 (328)
T ss_dssp ------------------------------------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEE
T ss_pred ------------------------------------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEE
Confidence 0245777787 55433 232221 2335666 567777
Q ss_pred EEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
+..... ...|.++|+.+++. +.+.. ......+..+|||+ +++....+.....
T Consensus 145 v~~~~~-----------~~~v~viD~~t~~~~~~i~~--------------g~~p~~i~~~~dG~--l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 145 VNCWSY-----------QNRILKIDTETDKVVDELTI--------------GIQPTSLVMDKYNK--MWTITDGGYEGSP 197 (328)
T ss_dssp EEECTT-----------CCEEEEEETTTTEEEEEEEC--------------SSCBCCCEECTTSE--EEEEBCCBCTTCS
T ss_pred EEcCCC-----------CCEEEEEECCCCeEEEEEEc--------------CCCccceEEcCCCC--EEEEECCCccCCc
Confidence 774311 23789999886654 33321 01123577888886 5444211100000
Q ss_pred cccCCCceeEeccCCCCCCCCceEeccc--cccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccc
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 347 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~ 347 (616)
.......+++++. .+++....... ......+.|+||+..++.... .++++|+++++.....+.....
T Consensus 198 -~~~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~~~~~~~~~~~~~- 266 (328)
T 3dsm_A 198 -YGYEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEADRVPVRPFLEFRD- 266 (328)
T ss_dssp -SCBCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCSSCCSSCSBCCCS-
T ss_pred -cccCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCCceeeeeeecCCC-
Confidence 0001246777776 54444432222 224567899999887655431 5899999873211011111000
Q ss_pred cccCCCCCCCeeeCCCCCEEEEEe
Q 007140 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 348 ~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
..| ..++++|+++.||+..
T Consensus 267 ---~~p--~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 267 ---TKY--YGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ---SCE--EEEEECTTTCCEEEEE
T ss_pred ---Cce--EEEEEcCCCCeEEEEc
Confidence 000 1277888777777764
No 198
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00034 Score=78.49 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=68.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC--CcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~~~~ 109 (616)
.+..+.|||||++|+.... + ..|.++++.++....+...... ...+..+.|+|+ ++.|+....
T Consensus 11 ~V~~l~~s~dg~~latg~~--------d--g~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~--- 75 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSS--------D--KTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSY--- 75 (753)
T ss_dssp CEEEECCCSSSCCEEEEET--------T--TEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEET---
T ss_pred eeEEEEECCCCCeEEEEEC--------C--CcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeC---
Confidence 4778999999998876642 2 4566667664433222211110 112668899988 887766421
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC---eeecC-CCCceeeeeECC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFG-TPAVYTAVEPSP 184 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~---~~~l~-~~~~~~~~~~Sp 184 (616)
...|.++|+ +++ ...+. ....+..++|+|
T Consensus 76 ----------------------------------------------Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 76 ----------------------------------------------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp ----------------------------------------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred ----------------------------------------------CCeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 123555555 343 12222 233567899999
Q ss_pred C--CcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 185 D--g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
+ |+.++....+ ..+.+||+..+
T Consensus 110 ~~~~~~l~sgs~d-------------g~I~vwdl~~~ 133 (753)
T 3jro_A 110 HEYGPLLLVASSD-------------GKVSVVEFKEN 133 (753)
T ss_dssp GGGCSEEEEEETT-------------SEEEEEECCSS
T ss_pred CCCCCEEEEEeCC-------------CcEEEEEeecC
Confidence 9 8888877643 36888988754
No 199
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=98.01 E-value=2.1e-05 Score=73.22 Aligned_cols=107 Identities=11% Similarity=0.025 Sum_probs=71.1
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~Vl 559 (616)
..+.+++++.|| ++.++++.|.+-.+.+ .|+||+.++... .++... ...+ ...+.|+++||.|+
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~~~---~~~vv~~HG~~~---------~~~~~~--~~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVAVQ---PVTAIVCHPLST---------EGGSMH--NKVVTMAARALRELGITVV 73 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSCCC---SEEEEEECSCTT---------TTCSTT--CHHHHHHHHHHHTTTCEEE
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCccc---cCEEEEECCCCC---------cCCccc--chHHHHHHHHHHHCCCeEE
Confidence 678899999999 8999999998742222 388888833100 011000 0001 34578999999999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
. |+| |. |..-....++....+|+.++++++.++. +.+||++-+
T Consensus 74 ~~d~~-g~---g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G 117 (220)
T 2fuk_A 74 RFNFR-SV---GTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAG 117 (220)
T ss_dssp EECCT-TS---TTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEE
T ss_pred EEecC-CC---CCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEE
Confidence 9 999 74 3322222234567899999999999874 677887765
No 200
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.01 E-value=0.0012 Score=67.33 Aligned_cols=118 Identities=8% Similarity=0.008 Sum_probs=61.9
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCc
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
.+..++|+|||++|+....+ ..+.+||+..++............ ......+.+..+...
T Consensus 247 ~v~~~~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 305 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTD-------------NRMRLWNSSNGENTLVNYGKVCNN--------SKKGLKFTVSCGCSS 305 (408)
T ss_dssp CEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCBCCCCCCCCCCC--------CSSCCCCEECCSSSS
T ss_pred ceeEEEEcCCCCEEEEecCC-------------CeEEEEECCCCccceecccccccc--------ccccceeEEecCCCc
Confidence 46689999999999887643 268899987654322111000000 000111222222222
Q ss_pred eEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-eccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.+++.. ....+.+++. ..++... +......+..+.|+||+..|+.... ++. |.++++.+
T Consensus 306 ~~~~~~------------~~~~i~v~d~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~--i~iw~~~~ 365 (408)
T 4a11_B 306 EFVFVP------------YGSTIAVYTV---YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR--DCN--ILAWVPSL 365 (408)
T ss_dssp CEEEEE------------ETTEEEEEET---TTCCEEEEECCCSSCEEEEEEETTTTEEEEEET--TSC--EEEEEECC
T ss_pred eEEEEe------------cCCEEEEEEC---cCCcceeeeccCCCeEEEEEEcCCCCEEEEECC--CCe--EEEEeCCC
Confidence 233331 1235666676 4444333 3334456678999999987766542 243 54555555
No 201
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.01 E-value=0.00074 Score=70.08 Aligned_cols=137 Identities=13% Similarity=0.245 Sum_probs=77.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce--------EecccCCCccccccccceEEecCCcEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--------KPLFESPDICLNAVFGSFVWVNNSTLLIF 103 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~--------~~lt~~~~~~~~~~~~~~~wspdg~~l~~ 103 (616)
.+..+.|+|+++.++++.. ....|.++++.++.. ..+..+. ..+..+.|+|++..+++
T Consensus 183 ~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~~l~ 248 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSAS---------DDHTICLWDINATPKEHRVIDAKNIFTGHT-----AVVEDVAWHLLHESLFG 248 (430)
T ss_dssp CCCCEEECTTSTTEEEEEC---------TTSCEEEEETTSCCBGGGEEECSEEECCCS-----SCEEEEEECSSCTTEEE
T ss_pred CeEEEEeCCCCCCeEEEEe---------CCCeEEEEeCCCCCCCCceeccceeecCCC-----CCEeeeEEeCCCCCEEE
Confidence 4789999999994444442 235678889876321 1121111 12567899995543433
Q ss_pred EecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CC---C-eeec-CCCCce
Q 007140 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T-AKDF-GTPAVY 177 (616)
Q Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g---~-~~~l-~~~~~~ 177 (616)
+.. ....|.++|+ ++ + ...+ .....+
T Consensus 249 s~~------------------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 249 SVA------------------------------------------------DDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp EEE------------------------------------------------TTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred EEe------------------------------------------------CCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 311 1235666666 33 1 2222 233356
Q ss_pred eeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC-c-eEEEecCCCCCCCCCccccCccCCCCcceeecCCCc
Q 007140 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-K-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 178 ~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
..++|+|+++.++++.... ..|.+||+.. + ....+... ......+.|+|+++.
T Consensus 281 ~~i~~~p~~~~~l~tg~~d------------g~v~vwd~~~~~~~~~~~~~h-------------~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSAD------------KTVALWDLRNLKLKLHSFESH-------------KDEIFQVQWSPHNET 335 (430)
T ss_dssp EEEEECSSCTTEEEEEETT------------SEEEEEETTCTTSCSEEEECC-------------SSCEEEEEECSSCTT
T ss_pred EEEEeCCCCCCEEEEEeCC------------CeEEEEeCCCCCCCeEEeecC-------------CCCEEEEEECCCCCC
Confidence 7899999999766554332 3688999864 2 23333221 111345899999975
No 202
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.00 E-value=0.00087 Score=67.13 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=62.6
Q ss_pred cccceEEccC---CCeEEEEEeeccccccCCCceeEEEEECCC-Cce--EecccCCCccccccccceEEecCCcEEEEEe
Q 007140 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPD---G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~-g~~--~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
.+...+|||| |+.|+.... ...|.++++.+ ++. ..+..+.. . +..+.|+||++.|+...
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~h~~-~----v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSW----------ANDVRCWEVQDSGQTIPKAQQMHTG-P----VLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEET----------TSEEEEEEECTTSCEEEEEEEECSS-C----EEEEEECTTSSEEEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECC----------CCcEEEEEcCCCCceeEEEeccccC-C----EEEEEECcCCCEEEEEc
Confidence 5889999999 577666542 24677778776 443 23322222 2 66899999999887642
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCeeec-CCCCceeeeeE-
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-GTPAVYTAVEP- 182 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~~l-~~~~~~~~~~~- 182 (616)
. ...|.++|+ +++...+ .....+..+.|
T Consensus 106 ~-------------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 106 C-------------------------------------------------DKTAKMWDLSSNQAIQIAQHDAPVKTIHWI 136 (368)
T ss_dssp T-------------------------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred C-------------------------------------------------CCcEEEEEcCCCCceeeccccCceEEEEEE
Confidence 1 134666677 4443332 23345667888
Q ss_pred -CCCCcEEEEEec
Q 007140 183 -SPDQKYVLITSM 194 (616)
Q Consensus 183 -SpDg~~i~~~~~ 194 (616)
+|+++.|+....
T Consensus 137 ~~~~~~~l~~~~~ 149 (368)
T 3mmy_A 137 KAPNYSCVMTGSW 149 (368)
T ss_dssp ECSSCEEEEEEET
T ss_pred eCCCCCEEEEccC
Confidence 899888877754
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.99 E-value=0.0031 Score=64.87 Aligned_cols=199 Identities=7% Similarity=-0.002 Sum_probs=112.3
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...++|+|+|+ .|++. ..+..|+++++++++...+...... .. +.|+++++.|++....
T Consensus 133 P~~la~d~~g~--lyv~d--------~~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~~----- 191 (409)
T 3hrp_A 133 MWGIAAVGNNT--VLAYQ--------RDDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGWE----- 191 (409)
T ss_dssp EEEEEECSTTE--EEEEE--------TTTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBSS-----
T ss_pred ceEEEEeCCCC--EEEEe--------cCCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEecC-----
Confidence 45678999997 44443 2357899999998887666433221 23 8999999987775110
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC-C-Ceeec----C-CCCceeeeeECCC
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G-TAKDF----G-TPAVYTAVEPSPD 185 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~-g-~~~~l----~-~~~~~~~~~~SpD 185 (616)
....|++++.. + ..+.+ . .......++++|+
T Consensus 192 ------------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 192 ------------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp ------------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred ------------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 01256777763 3 23333 2 2223457899997
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCC-cceeecCCCceEEEEEeec
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspdg~~~l~~~~~~d 264 (616)
+.+|++.. . ...|+++|.+++....+...+..... ..... .+.++|++. .||+..
T Consensus 230 ~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g~~-------~~~P~~~ia~~p~~g-~lyv~d--- 285 (409)
T 3hrp_A 230 EEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSGSL-------GTNPGPYLIYYFVDS-NFYMSD--- 285 (409)
T ss_dssp SSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCSCC-------CCSSCCEEEEETTTT-EEEEEE---
T ss_pred CCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccCCC-------CCCccccEEEeCCCC-EEEEEe---
Confidence 77788743 2 23689999987765555322111100 00112 678999654 365542
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCceEecccc---------------ccccceeecCCCceEEEeeeccCccEEEEEE
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------LRFRSVSWCDDSLALVNETWYKTSQTRTWLV 329 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~---------------~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~ 329 (616)
...+.++.++. ++ ....+.... .....+++++||..++.+.+. ..+|.++
T Consensus 286 --------~~~~~I~~~~~---~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---~~~I~~~ 350 (409)
T 3hrp_A 286 --------QNLSSVYKITP---DG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---GYCLRKL 350 (409)
T ss_dssp --------TTTTEEEEECT---TC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT---TCEEEEE
T ss_pred --------CCCCEEEEEec---CC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC---CCEEEEE
Confidence 12234555554 32 333222111 123457789998855554312 2379999
Q ss_pred eCCC
Q 007140 330 CPGS 333 (616)
Q Consensus 330 d~~~ 333 (616)
++.+
T Consensus 351 ~~~~ 354 (409)
T 3hrp_A 351 DILD 354 (409)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9655
No 204
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.99 E-value=0.0023 Score=61.41 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=77.7
Q ss_pred ceEEEEeCCC-CeeecCCC--CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCC
Q 007140 157 AQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~~g-~~~~l~~~--~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (616)
..|++++++| ....+... .....++++|++..|+++... ...|++++.+++..+.+.....
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~~~---- 121 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ------------LDRIEVAKMDGTQRRVLFDTGL---- 121 (267)
T ss_dssp TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC----
T ss_pred CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC------------CCEEEEEEcCCCCEEEEEECCC----
Confidence 4677888855 33333222 234578999998898888543 2368889988765444432110
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCce
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLA 312 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~~ 312 (616)
.....+.+.|++. .||+.... .....++.++. ++...+.+.... .....+++++|+..
T Consensus 122 --------~~P~~i~vd~~~g-~lyv~~~~---------~~~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~ 180 (267)
T 1npe_A 122 --------VNPRGIVTDPVRG-NLYWTDWN---------RDNPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQ 180 (267)
T ss_dssp --------SSEEEEEEETTTT-EEEEEECC---------SSSCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTTTE
T ss_pred --------CCccEEEEeeCCC-EEEEEECC---------CCCcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCE
Confidence 1123577888654 37665321 01234555554 433333333222 23456789998776
Q ss_pred EEEeeeccCccEEEEEEeCCC
Q 007140 313 LVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 313 l~~~~~~~~~~~~l~~~d~~~ 333 (616)
|+..... ..+|+++++++
T Consensus 181 lyv~d~~---~~~I~~~~~~g 198 (267)
T 1npe_A 181 LCWVDAG---THRAECLNPAQ 198 (267)
T ss_dssp EEEEETT---TTEEEEEETTE
T ss_pred EEEEECC---CCEEEEEecCC
Confidence 5544322 23799999986
No 205
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=97.98 E-value=4.7e-05 Score=79.69 Aligned_cols=87 Identities=16% Similarity=0.160 Sum_probs=64.3
Q ss_pred EEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 494 ~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
.|.|++++|++- .+.|+||+.++ +.... .. ...+.||++||+|+. |+| |..+....
T Consensus 160 ~l~~~l~~P~~~-----~~~P~Vv~lhG--------------~~~~~--~~-~~a~~La~~Gy~Vla~D~r-G~~~~~~~ 216 (446)
T 3hlk_A 160 RVRGTLFLPPEP-----GPFPGIVDMFG--------------TGGGL--LE-YRASLLAGKGFAVMALAYY-NYEDLPKT 216 (446)
T ss_dssp TEEEEEEECSSS-----CCBCEEEEECC--------------SSCSC--CC-HHHHHHHTTTCEEEEECCS-SSTTSCSC
T ss_pred eEEEEEEeCCCC-----CCCCEEEEECC--------------CCcch--hh-HHHHHHHhCCCEEEEeccC-CCCCCCcc
Confidence 799999999762 23488888833 21211 12 347899999999999 999 86554433
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 573 LPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 573 f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+.. ..++|+.++++||.+++.+|++||+|-+
T Consensus 217 ~~~-----~~~~d~~~a~~~l~~~~~vd~~~i~l~G 247 (446)
T 3hlk_A 217 MET-----LHLEYFEEAMNYLLSHPEVKGPGVGLLG 247 (446)
T ss_dssp CSE-----EEHHHHHHHHHHHHTSTTBCCSSEEEEE
T ss_pred hhh-----CCHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 221 2489999999999999999999999876
No 206
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=97.98 E-value=1.1e-05 Score=84.00 Aligned_cols=88 Identities=22% Similarity=0.194 Sum_probs=64.7
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCC
Q 007140 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGD 571 (616)
Q Consensus 493 ~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~ 571 (616)
..+.|++++|++- .+.|+||++| |+...+. . ...+.|+++||+|+. |+| |..+...
T Consensus 143 ~~l~~~l~~P~~~-----~~~P~Vv~~h--------------G~~~~~~--~-~~a~~La~~Gy~V~a~D~r-G~g~~~~ 199 (422)
T 3k2i_A 143 GRVRATLFLPPGP-----GPFPGIIDIF--------------GIGGGLL--E-YRASLLAGHGFATLALAYY-NFEDLPN 199 (422)
T ss_dssp TTEEEEEEECSSS-----CCBCEEEEEC--------------CTTCSCC--C-HHHHHHHTTTCEEEEEECS-SSTTSCS
T ss_pred CcEEEEEEcCCCC-----CCcCEEEEEc--------------CCCcchh--H-HHHHHHHhCCCEEEEEccC-CCCCCCC
Confidence 3799999999862 2348888883 3222211 2 447889999999999 999 8654433
Q ss_pred CccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 572 KLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 572 ~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
.+.. ...+|+.+++++|.++..+|++||+|-+
T Consensus 200 ~~~~-----~~~~d~~~~~~~l~~~~~v~~~~i~l~G 231 (422)
T 3k2i_A 200 NMDN-----ISLEYFEEAVCYMLQHPQVKGPGIGLLG 231 (422)
T ss_dssp SCSC-----EETHHHHHHHHHHHTSTTBCCSSEEEEE
T ss_pred Cccc-----CCHHHHHHHHHHHHhCcCcCCCCEEEEE
Confidence 3221 3478999999999999999999999876
No 207
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=97.97 E-value=3.2e-05 Score=78.64 Aligned_cols=115 Identities=9% Similarity=0.026 Sum_probs=69.6
Q ss_pred ceeEEEEECCC--C--cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCC-CCchHHHHh-hC
Q 007140 481 QKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM-TPTSSLIFL-AR 554 (616)
Q Consensus 481 ~~e~i~~~~~D--G--~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~la-~~ 554 (616)
....|.|++.| | ..+.|+|+.|.+. + .+.|+|+|.++... .. ...| ++... .+.+.+.|+ ++
T Consensus 42 ~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~-~---~~~PvV~~~HG~~~--~~-----~~~p-s~~~~~~~~~~~~lal~~ 109 (377)
T 4ezi_A 42 QLYKINYKTQSPDGNLTIASGLVAMPIHP-V---GQVGIISYQHGTRF--ER-----NDVP-SRNNEKNYIYLAAYGNSA 109 (377)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEESSC-S---SCEEEEEEECCCCC--ST-----TCSG-GGCCGGGHHHHHHHTTTT
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCCC-C---CCCcEEEEeCCCcC--Cc-----ccCC-CcCcccchHHHHHHHHhC
Confidence 56667777665 5 4689999999875 2 24599999854320 00 0011 11000 113456788 99
Q ss_pred CeEEEE-CCCCCccccCC---CccCChhHHHHHHHHHHHHHHHHHc-CCccCCceEEEe
Q 007140 555 RFAVLA-GPSIPIIGEGD---KLPNDRFVEQLVSSAEAAVEEVVRR-GVGLPILYLNTT 608 (616)
Q Consensus 555 Gy~Vl~-n~R~GS~GyG~---~f~~~~~g~~~~~D~~~~v~~l~~~-~~vD~~ri~~~~ 608 (616)
||+|+. ||| |..+.+. .|..+.....++.|.+.++..+.+. ++.|.+||++.+
T Consensus 110 Gy~Vv~~D~r-G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G 167 (377)
T 4ezi_A 110 GYMTVMPDYL-GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAG 167 (377)
T ss_dssp CCEEEEECCT-TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CcEEEEeCCC-CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEE
Confidence 999999 999 8755443 2333322334455555555555544 777889998876
No 208
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.0016 Score=64.89 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=34.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC-------ceE-ecccCCCccccccccceEEecCCcEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-------EAK-PLFESPDICLNAVFGSFVWVNNSTLLIF 103 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g-------~~~-~lt~~~~~~~~~~~~~~~wspdg~~l~~ 103 (616)
.+....|||||+.||-.+. + ..|.++++..+ +.. .+..+.. .+..+.|+|||+.|+.
T Consensus 60 ~v~~v~~sp~~~~las~s~--------D--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~sp~g~~las 124 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSF--------D--STVSIWAKEESADRTFEMDLLAIIEGHEN-----EVKGVAWSNDGYYLAT 124 (330)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEEC-------CCCEEEEEEC---------CEEEEEECTTSCEEEE
T ss_pred CEEEEEECCCCCEEEEEeC--------C--CcEEEEEcccCcCccccceeEEEEcCCCC-----cEEEEEECCCCCEEEE
Confidence 4778999999998776542 2 45556676432 111 1211211 2568999999998776
Q ss_pred E
Q 007140 104 T 104 (616)
Q Consensus 104 ~ 104 (616)
.
T Consensus 125 ~ 125 (330)
T 2hes_X 125 C 125 (330)
T ss_dssp E
T ss_pred E
Confidence 4
No 209
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=97.97 E-value=3.5e-05 Score=75.92 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=69.4
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCC--CC-chHHHHhhC---
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TP-TSSLIFLAR--- 554 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~q~la~~--- 554 (616)
..+.++|.+.+| ++..+||+|++++++++| |+|++.+++. +....|... .. ...+.|+++
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~--Pvlv~lHG~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~ 105 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPNKKY--NIFYLMHGGG-----------ENENTIFSNDVKLQNILDHAIMNGEL 105 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCC--EEEEEECCTT-----------CCTTSTTSTTTCHHHHHHHHHHTTSS
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCCCCC--CEEEEECCCC-----------CCcchhhcccchHHHHHHHHHHcCCC
Confidence 677889998886 999999999999887666 8888774321 001222111 11 224456666
Q ss_pred -CeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---------CccCCceEEEee
Q 007140 555 -RFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---------VGLPILYLNTTA 609 (616)
Q Consensus 555 -Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---------~vD~~ri~~~~~ 609 (616)
||+|+. |+| |+.+.+.. |.....+|++..++...... ..|++|++|.+.
T Consensus 106 ~~~ivv~pd~~-~~~~~~~~-----~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~ 165 (297)
T 1gkl_A 106 EPLIVVTPTFN-GGNCTAQN-----FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGF 165 (297)
T ss_dssp CCEEEEECCSC-STTCCTTT-----HHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEE
T ss_pred CCEEEEEecCc-CCccchHH-----HHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEE
Confidence 499999 999 86554433 33344567776666543221 148888999874
No 210
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=97.96 E-value=3.9e-05 Score=73.21 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=67.5
Q ss_pred cee--EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCC-CchHHHHhhCCeE
Q 007140 481 QKE--MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFA 557 (616)
Q Consensus 481 ~~e--~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~q~la~~Gy~ 557 (616)
+.| .+.+++.|| +|.++++.|.+ ++. |+||+.++.. . .++ .+.... ....+.|+++||.
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~----~~~--p~vv~~HG~~--------~-~~~--~~~~~~~~~~~~~l~~~G~~ 81 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE----KSA--PIAIILHPHP--------Q-FGG--TMNNQIVYQLFYLFQKRGFT 81 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS----TTC--CEEEEECCCG--------G-GTC--CTTSHHHHHHHHHHHHTTCE
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC----CCC--CEEEEECCCc--------c-cCC--CccchHHHHHHHHHHHCCCE
Confidence 555 899999999 99999999864 223 7777773210 0 011 110001 1346789999999
Q ss_pred EEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 558 VLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 558 Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|+. |+| |. |..-.....+...++|+.+++++|.+++. |++||++-+
T Consensus 82 v~~~d~~-g~---G~s~~~~~~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G 128 (249)
T 2i3d_A 82 TLRFNFR-SI---GRSQGEFDHGAGELSDAASALDWVQSLHP-DSKSCWVAG 128 (249)
T ss_dssp EEEECCT-TS---TTCCSCCCSSHHHHHHHHHHHHHHHHHCT-TCCCEEEEE
T ss_pred EEEECCC-CC---CCCCCCCCCccchHHHHHHHHHHHHHhCC-CCCeEEEEE
Confidence 999 999 74 43222222234456999999999998864 888888765
No 211
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=97.96 E-value=2.5e-05 Score=75.67 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=66.9
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCC
Q 007140 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPS 563 (616)
Q Consensus 485 i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R 563 (616)
.++.+.||..+.+++..|....+++ +.|+||+.+++.+ ..+....| ....+.|+++||+|+. |+|
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~--~~p~vv~~HGgg~--------~~~~~~~~----~~~~~~l~~~G~~v~~~d~~ 82 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENY--TFPAIIICPGGGY--------QHISQRES----DPLALAFLAQGYQVLLLNYT 82 (276)
T ss_dssp EECCCBTTBEEEEECCCC------C--CBCEEEEECCSTT--------TSCCGGGS----HHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCCeEEEEEEeCCcccccCC--CCCEEEEEcCCcc--------ccCCchhh----HHHHHHHHHCCCEEEEecCc
Confidence 4667789999998877776543333 3489998843210 01110111 1446789999999999 999
Q ss_pred CCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 564 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 564 ~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
|. |.+... ..+ ....+|+.+++++|.+.. -+|++||++.+
T Consensus 83 -g~-g~s~~~--~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G 125 (276)
T 3hxk_A 83 -VM-NKGTNY--NFL-SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLG 125 (276)
T ss_dssp -CT-TSCCCS--CTH-HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEE
T ss_pred -cC-CCcCCC--CcC-chHHHHHHHHHHHHHHhHHHcCCCcceEEEEE
Confidence 75 443321 222 257899999999998874 38999999876
No 212
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.93 E-value=0.0016 Score=66.24 Aligned_cols=205 Identities=14% Similarity=0.099 Sum_probs=111.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCC-ccccccccceEEec-CCcEEEEEecCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~-~~~~~~~~~~~wsp-dg~~l~~~~~~~~ 109 (616)
.+....|+|++...+++... ...|.+||+.+++......... ..-...+..+.|++ ++..|+....
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~---------D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~--- 226 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSG---------DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC--- 226 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECT---------TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET---
T ss_pred ceEEEEEecCCCCEEEEECC---------CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC---
Confidence 46678899987654444432 3567778999887654432110 00011144667765 6665554311
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCC--CC-eeecC-CCCceeeeeECCC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD--GT-AKDFG-TPAVYTAVEPSPD 185 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~--g~-~~~l~-~~~~~~~~~~SpD 185 (616)
...+.++|+. ++ ...+. ....+..++|+||
T Consensus 227 ----------------------------------------------D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 227 ----------------------------------------------DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp ----------------------------------------------TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred ----------------------------------------------CCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 1234555652 22 23332 3345678999999
Q ss_pred CcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 186 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
|+.|+..+.+ ..+.+||+..++. ..+...+..... .......+.|+|+|+. ++..
T Consensus 261 ~~~l~s~s~D-------------~~i~lwd~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~g~~--l~~g--- 316 (380)
T 3iz6_a 261 GQRFGTGSDD-------------GTCRLFDMRTGHQLQVYNREPDRNDN------ELPIVTSVAFSISGRL--LFAG--- 316 (380)
T ss_dssp SSEEEEECSS-------------SCEEEEETTTTEEEEEECCCCSSSCC------SSCSCSEEEECSSSSE--EEEE---
T ss_pred CCeEEEEcCC-------------CeEEEEECCCCcEEEEeccccccccc------ccCceEEEEECCCCCE--EEEE---
Confidence 9998877543 3688999876543 333221111000 0011345889999983 2221
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCce-Eec----cccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH----KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~----~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.....+++|+. ..++.. .+. .....+..+.|+|||..|+.... ++..+|| ++.+
T Consensus 317 --------~~dg~i~vwd~---~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--D~~i~iW--~~~~ 375 (380)
T 3iz6_a 317 --------YSNGDCYVWDT---LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW--DKNLKIW--AFSG 375 (380)
T ss_dssp --------CTTSCEEEEET---TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT--TSCEEEE--ECCS
T ss_pred --------ECCCCEEEEEC---CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC--CCCEEEE--ecCC
Confidence 12345677776 433332 231 23345678899999998776552 2444555 4444
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.93 E-value=0.0014 Score=66.11 Aligned_cols=85 Identities=12% Similarity=0.029 Sum_probs=51.9
Q ss_pred eEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCCCcccCCCCeeeecCccccchhcccccc
Q 007140 63 RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (616)
Q Consensus 63 ~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (616)
.|.++|.++++...-..... .. .+.+||||++|++.... ++.. .|
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-----~P-~i~~spDg~~lyVan~~~~r~~-----------------~G----------- 92 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-----LS-LAVAGHSGSDFALASTSFARSA-----------------KG----------- 92 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-----TC-EEEECTTSSCEEEEEEEETTTT-----------------SS-----------
T ss_pred eEEEEECCCCeEEEEEeCCC-----CC-ceEECCCCCEEEEEcccccccc-----------------cC-----------
Confidence 89999999987543322221 13 68999999988775210 0000 00
Q ss_pred ccCCCcccceeEeccceEEEEeC-CCCe-eecCCC--------CceeeeeECCCCcEEEEEe
Q 007140 142 LKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP--------AVYTAVEPSPDQKYVLITS 193 (616)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~d~-~g~~-~~l~~~--------~~~~~~~~SpDg~~i~~~~ 193 (616)
+ ....|.++|+ ++++ ..+..+ ..-..+.+||||+++++..
T Consensus 93 ------~------~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 93 ------K------RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp ------S------EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred ------C------CCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 0 1357888998 6653 333211 1224789999999998884
No 214
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=97.92 E-value=8.3e-06 Score=81.46 Aligned_cols=90 Identities=16% Similarity=0.028 Sum_probs=60.8
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEEE-CCCCCccccC
Q 007140 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA-GPSIPIIGEG 570 (616)
Q Consensus 493 ~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl~-n~R~GS~GyG 570 (616)
..|.+++|.|.+-. +.|+||++|++. -..++...| . .....|+. .||+|+. ||| ++.+..
T Consensus 65 ~~i~~~~~~p~~~~-----~~p~vv~~HGGg--------~~~g~~~~~---~-~~~~~la~~~g~~vv~~dyr-~~p~~~ 126 (322)
T 3fak_A 65 AGCAAEWVRAPGCQ-----AGKAILYLHGGG--------YVMGSINTH---R-SMVGEISRASQAAALLLDYR-LAPEHP 126 (322)
T ss_dssp TTEEEEEEECTTCC-----TTCEEEEECCST--------TTSCCHHHH---H-HHHHHHHHHHTSEEEEECCC-CTTTSC
T ss_pred CCeEEEEEeCCCCC-----CccEEEEEcCCc--------cccCChHHH---H-HHHHHHHHhcCCEEEEEeCC-CCCCCC
Confidence 45899999997622 348999994321 011111112 1 22344555 6999999 999 875442
Q ss_pred CCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 571 DKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 571 ~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
|+ ..++|+.++++||.++ -+|++||+|.+-
T Consensus 127 --~~------~~~~D~~~a~~~l~~~-~~d~~ri~l~G~ 156 (322)
T 3fak_A 127 --FP------AAVEDGVAAYRWLLDQ-GFKPQHLSISGD 156 (322)
T ss_dssp --TT------HHHHHHHHHHHHHHHH-TCCGGGEEEEEE
T ss_pred --CC------cHHHHHHHHHHHHHHc-CCCCceEEEEEc
Confidence 22 4689999999999998 579999999863
No 215
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.92 E-value=0.0024 Score=62.38 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=36.6
Q ss_pred cccceEEccC--CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC--CcEEEEE
Q 007140 32 KINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~ 104 (616)
.+....|+|+ |+.||-.+. ...|.++++.+++..++...... ...+..+.|+|+ |+.|+..
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~----------D~~v~iWd~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSY----------DGKVMIWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEET----------TTEEEEEEBSSSCBCCCEEECCC--SSCEEEEEECCGGGCSEEEEE
T ss_pred CeEEEEecCCCcCCEEEEEcC----------CCEEEEEEcCCCceEEEEEeecC--CCceeEEEeCcCCCCcEEEEE
Confidence 4778899874 777665542 25677778887753222211100 112568899997 7776654
No 216
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=97.91 E-value=1.8e-05 Score=78.13 Aligned_cols=108 Identities=12% Similarity=0.038 Sum_probs=70.8
Q ss_pred eeEEEEE---CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEE
Q 007140 482 KEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 482 ~e~i~~~---~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~V 558 (616)
...++|. ..+|.++++++|.|.+.++ +.|+||+.|+ +......+.....+.++++||+|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~~----~~p~vv~lHG--------------~~~~~~~~~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYTP----DRPVVVVQHG--------------VLRNGADYRDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCCT----TSCEEEEECC--------------TTCCHHHHHHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCCC----CCcEEEEeCC--------------CCCCHHHHHHHHHHHHHHCCcEE
Confidence 3446776 6799999999999988653 2388888832 21111000003467889999999
Q ss_pred EE-CCCCCc-----ccc--CCCc--cC--ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 559 LA-GPSIPI-----IGE--GDKL--PN--DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS-----~Gy--G~~f--~~--~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+. |+| ++ .+| |..+ .. ..+....++|+.+++++|.++..+|++||+|.+
T Consensus 86 ~~~d~~-~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G 146 (304)
T 3d0k_A 86 VAPTFS-DEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFG 146 (304)
T ss_dssp EEEECC-TTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEE
T ss_pred EEeCCc-cccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEE
Confidence 99 999 64 122 2211 11 112233567899999999998789999999876
No 217
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=97.91 E-value=1.1e-05 Score=86.55 Aligned_cols=101 Identities=14% Similarity=0.146 Sum_probs=67.6
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEEE-CCCCCc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA-GPSIPI 566 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl~-n~R~GS 566 (616)
+.|.+.|. +|.|.+. +++ ++|+|||+|+|.+. .++.... . ...+.||+ +|++|+. |||.|+
T Consensus 93 ~edcl~l~--v~~P~~~-~~~--~~Pviv~iHGGg~~--------~g~~~~~---~-~~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDCLYLN--VWTPYPR-PAS--PTPVLIWIYGGGFY--------SGAASLD---V-YDGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCCCEEE--EEEESSC-CSS--CEEEEEEECCSTTT--------CCCTTSG---G-GCTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCeEE--EeecCCC-CCC--CCeEEEEECCCccc--------cCCCCCC---c-CChHHHHhcCCEEEEEecccccc
Confidence 56777775 6678653 222 46999999654321 2221111 1 22356776 8999999 999988
Q ss_pred cccCCCc-c-C--ChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 567 IGEGDKL-P-N--DRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 567 ~GyG~~f-~-~--~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
.||+... . . +++ .+.|+.+|++|+.+.- -.||+||.|.+-
T Consensus 156 ~Gf~~~~~~~~~~~n~---gl~D~~~al~wv~~~i~~fggDp~~v~i~G~ 202 (543)
T 2ha2_A 156 FGFLALPGSREAPGNV---GLLDQRLALQWVQENIAAFGGDPMSVTLFGE 202 (543)
T ss_dssp HHHCCCTTCSSCCSCH---HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred cccccCCCCCCCCCcc---cHHHHHHHHHHHHHHHHHhCCChhheEEEee
Confidence 9998652 1 1 454 4899999999998761 279999999863
No 218
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=97.91 E-value=7.8e-05 Score=74.34 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=69.9
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC-CeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~-Gy~V 558 (616)
...+.+++.+.+| +|.+++|.|.+ . + +.|+||++|++. ...++...| . .....|+.+ ||.|
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~-~--~--~~p~vv~~HGGg--------~~~g~~~~~---~-~~~~~La~~~g~~V 124 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKT-Q--G--PYGVLVYYHGGG--------FVLGDIESY---D-PLCRAITNSCQCVT 124 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSS-C--S--CCCEEEEECCST--------TTSCCTTTT---H-HHHHHHHHHHTSEE
T ss_pred cEEEEEEecCCCC-eEEEEEEecCC-C--C--CCcEEEEECCCc--------cccCChHHH---H-HHHHHHHHhcCCEE
Confidence 4778889998888 89999999986 2 2 348999984321 111111222 1 335667764 9999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC-Cc-cCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG-VG-LPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~-~v-D~~ri~~~~ 608 (616)
+. ||| |+... .|+ ...+|+.++++||.+.. .. |++||+|-+
T Consensus 125 v~~Dyr-g~~~~--~~p------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G 168 (323)
T 3ain_A 125 ISVDYR-LAPEN--KFP------AAVVDSFDALKWVYNNSEKFNGKYGIAVGG 168 (323)
T ss_dssp EEECCC-CTTTS--CTT------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEE
T ss_pred EEecCC-CCCCC--CCc------chHHHHHHHHHHHHHhHHHhCCCceEEEEe
Confidence 99 999 86432 122 46899999999998763 22 899998876
No 219
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=97.90 E-value=3.3e-05 Score=74.89 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=67.9
Q ss_pred eeEEEEECCCCcEEEEEEEcCCC---CCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEE
Q 007140 482 KEMIKYQRKDGVPLTATLYLPPG---YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 482 ~e~i~~~~~DG~~l~g~l~~P~~---~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~V 558 (616)
.+.+++ ..+|.++...+|+|.+ +...+ +.|+||+.|++.+ ..+....| . ...+.|+++||.|
T Consensus 4 ~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~--~~p~vv~~HGgg~--------~~~~~~~~---~-~~~~~l~~~G~~v 68 (277)
T 3bxp_A 4 VEQRTL-NTAAHPFQITAYWLDQISDFETAV--DYPIMIICPGGGF--------TYHSGREE---A-PIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEE-CSTTCCEEEEEEEECCCCSSSCCC--CEEEEEEECCSTT--------TSCCCTTH---H-HHHHHHHHTTCEE
T ss_pred eEEEEe-ccCCCcceEEEEeCCcccccccCC--CccEEEEECCCcc--------ccCCCccc---h-HHHHHHHHCCCEE
Confidence 455666 4588899999999984 23322 3489999843210 01111111 1 3467889999999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
+. |+| |....+..+. ...+|+.+++++|.+.. -+|++||++-+
T Consensus 69 ~~~d~~-g~g~~~~~~~------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G 115 (277)
T 3bxp_A 69 VVLNYQ-LIVGDQSVYP------WALQQLGATIDWITTQASAHHVDCQRIILAG 115 (277)
T ss_dssp EEEECC-CSTTTCCCTT------HHHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEecc-cCCCCCccCc------hHHHHHHHHHHHHHhhhhhcCCChhheEEEE
Confidence 99 999 8321222222 46789999999998763 27888988865
No 220
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=97.90 E-value=3.7e-05 Score=70.92 Aligned_cols=105 Identities=12% Similarity=-0.022 Sum_probs=69.4
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~Vl 559 (616)
.+|.+++++.|| +|+++++.|.+-. +.|+||+.++... +++... ...+ ...+.|+++||.|+
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~~~-----~~~~vv~~HG~~~---------~~~~~~--~~~~~~~~~~l~~~g~~v~ 67 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKGIE-----KSVTGIICHPHPL---------HGGTMN--NKVVTTLAKALDELGLKTV 67 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSSCC-----CSEEEEEECSCGG---------GTCCTT--CHHHHHHHHHHHHTTCEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCCCC-----CCCEEEEEcCCCC---------CCCccC--CchHHHHHHHHHHCCCEEE
Confidence 567789999999 9999999997521 2388888843110 011110 0001 34678999999999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
. |+| |. |..-..........+|+.+++++|.++ .+.+||++-+
T Consensus 68 ~~d~~-g~---g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G 111 (208)
T 3trd_A 68 RFNFR-GV---GKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAG 111 (208)
T ss_dssp EECCT-TS---TTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEE
T ss_pred EEecC-CC---CCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEE
Confidence 9 999 74 333222122345789999999999987 4557887754
No 221
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=97.88 E-value=1.7e-05 Score=83.99 Aligned_cols=103 Identities=18% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCC-eEEEE-CCCCCc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLA-GPSIPI 566 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~G-y~Vl~-n~R~GS 566 (616)
+.|++.|. ++.|.. .++ ++|+|||+|+|.+. .++...+ . ...+.||++| ++|+. |||.|.
T Consensus 81 ~edcl~l~--v~~P~~--~~~--~~Pviv~iHGGg~~--------~g~~~~~---~-~~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDGLYLN--IWSPAA--DGK--KRPVLFWIHGGAFL--------FGSGSSP---W-YDGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCCCEEE--EEESCS--SSC--CEEEEEEECCSTTT--------SCCTTCG---G-GCCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCCcEEE--EEecCC--CCC--CCcEEEEEcCCccC--------CCCCCCC---c-CCHHHHHhCCCEEEEeCCCcCch
Confidence 55777775 667862 222 45999999654321 2221211 1 2246788887 99999 999888
Q ss_pred cccCCCccC-----ChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 567 IGEGDKLPN-----DRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 567 ~GyG~~f~~-----~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
.||+..... ..-|...+.|+.++++|+.+.- -+||+||.|.+-
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~ 193 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGE 193 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 788765431 2235567999999999998762 279999998763
No 222
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=97.87 E-value=7.1e-06 Score=82.15 Aligned_cols=91 Identities=13% Similarity=0.158 Sum_probs=67.6
Q ss_pred EEEECCCCc--EEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-C
Q 007140 485 IKYQRKDGV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-G 561 (616)
Q Consensus 485 i~~~~~DG~--~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n 561 (616)
|+++. .|. .+.+.||+|.+ +.|.|+||.++ + ..+ .+.+||+|+. |
T Consensus 114 I~v~~-~g~s~sf~~~i~lP~g-----~~P~Pvii~~~--------------~--~~~----------~~~~G~A~i~f~ 161 (433)
T 4g4g_A 114 VRVTV-GSKSISFSASIRKPSG-----AGPFPAIIGIG--------------G--ASI----------PIPSNVATITFN 161 (433)
T ss_dssp EEEEE-TTEEEEEEEEEECCSS-----SCCEEEEEEES--------------C--CCS----------CCCTTSEEEEEC
T ss_pred EEEEc-CCeeEEEEEEEECCCC-----CCCccEEEEEC--------------C--Ccc----------ccCCCeEEEEeC
Confidence 44443 454 46999999976 24669999872 1 011 2568999999 8
Q ss_pred C--------CCCccccCCCccC-----ChhHHHHHH--HHHHHHHHHHH----cCCccCCceEEEee
Q 007140 562 P--------SIPIIGEGDKLPN-----DRFVEQLVS--SAEAAVEEVVR----RGVGLPILYLNTTA 609 (616)
Q Consensus 562 ~--------R~GS~GyG~~f~~-----~~~g~~~~~--D~~~~v~~l~~----~~~vD~~ri~~~~~ 609 (616)
+ | ||.|||. |.. .+||....- |+..++|+|.. ++.||++||||++.
T Consensus 162 ~~~va~d~~~-gsrG~g~-f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~ 226 (433)
T 4g4g_A 162 NDEFGAQMGS-GSRGQGK-FYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGC 226 (433)
T ss_dssp HHHHSCCSSG-GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEE
T ss_pred CcccccccCC-CcCCccc-cccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEe
Confidence 7 7 8889988 552 567766554 89999999999 89999999999984
No 223
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=97.87 E-value=8.6e-06 Score=80.62 Aligned_cols=85 Identities=12% Similarity=0.071 Sum_probs=66.0
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CC--------C
Q 007140 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GP--------S 563 (616)
Q Consensus 493 ~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~--------R 563 (616)
..+...||+|.+.. .|.|+||.++ + .++ ...+||+|+. |+ |
T Consensus 90 ~~~~~~i~lP~~~~----~p~Pvii~i~--------------~--~~~----------~~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSGT----APYPAIIGYG--------------G--GSL----------PAPAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSSC----SSEEEEEEET--------------T--CSS----------CCCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCCC----CCccEEEEEC--------------C--Ccc----------ccCCCeEEEEecccccccccCC
Confidence 46889999997643 4669999872 1 111 2568999999 87 8
Q ss_pred CCccccCCCccC-----ChhHHHHHH--HHHHHHHHHHHcC--CccCCceEEEee
Q 007140 564 IPIIGEGDKLPN-----DRFVEQLVS--SAEAAVEEVVRRG--VGLPILYLNTTA 609 (616)
Q Consensus 564 ~GS~GyG~~f~~-----~~~g~~~~~--D~~~~v~~l~~~~--~vD~~ri~~~~~ 609 (616)
||.|||. |.+ .+||....- |+..++|+|..++ .||++||||++.
T Consensus 140 -gs~g~g~-f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~ 192 (375)
T 3pic_A 140 -GSRGQGK-FYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGC 192 (375)
T ss_dssp -GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEE
T ss_pred -CCcccee-cccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEe
Confidence 8889987 552 567766654 9999999999998 999999999974
No 224
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=97.86 E-value=1.9e-05 Score=79.33 Aligned_cols=104 Identities=11% Similarity=-0.006 Sum_probs=69.2
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCC-CCCCCCCCcEEEecccCcccccccCCcccCCCCc--cCCCCCchHHHHh-hCC
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE--FSGMTPTSSLIFL-ARR 555 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~-~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~la-~~G 555 (616)
+..+.+.+.+ |..+...+|+|.+. ++++ +.|+||++|++.+ ..+++.. | . .....|+ ++|
T Consensus 53 v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~--~~p~vv~~HGgg~--------~~~~~~~~~~---~-~~~~~la~~~g 116 (338)
T 2o7r_A 53 VLTKDLALNP--LHNTFVRLFLPRHALYNSA--KLPLVVYFHGGGF--------ILFSAASTIF---H-DFCCEMAVHAG 116 (338)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEGGGGGSSC--CEEEEEEECCSTT--------TSCCTTBHHH---H-HHHHHHHHHHT
T ss_pred EEEEEEEecC--CCCeEEEEEeCCCCCcCCC--CceEEEEEcCCcC--------cCCCCCchhH---H-HHHHHHHHHCC
Confidence 4667778865 56678889999875 3323 4599999944211 1111111 2 1 2345677 789
Q ss_pred eEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC------CccCCceEEEe
Q 007140 556 FAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG------VGLPILYLNTT 608 (616)
Q Consensus 556 y~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~------~vD~~ri~~~~ 608 (616)
|+|+. ||| |+.... + ...++|+.++++||.++. .+|++||++-+
T Consensus 117 ~~vv~~d~r-g~~~~~--~------~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G 167 (338)
T 2o7r_A 117 VVIASVDYR-LAPEHR--L------PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMG 167 (338)
T ss_dssp CEEEEEECC-CTTTTC--T------THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEE
T ss_pred cEEEEecCC-CCCCCC--C------chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEE
Confidence 99999 999 854321 1 246899999999999873 37889998865
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.86 E-value=0.0013 Score=66.47 Aligned_cols=77 Identities=13% Similarity=-0.053 Sum_probs=43.8
Q ss_pred CCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCC-Ccc--ccccccceEEecCCcEEEE
Q 007140 27 YPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC--LNAVFGSFVWVNNSTLLIF 103 (616)
Q Consensus 27 ~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~-~~~--~~~~~~~~~wspdg~~l~~ 103 (616)
++.+... .+.+||||++++.................|.++|+.+++...-...+ ... .......+.+||||++|+.
T Consensus 62 i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyV 140 (368)
T 1mda_H 62 SLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLF 140 (368)
T ss_dssp EEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEE
T ss_pred EeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEE
Confidence 3433334 89999999986665421000000012478999999998754322111 000 0011357899999998877
Q ss_pred E
Q 007140 104 T 104 (616)
Q Consensus 104 ~ 104 (616)
.
T Consensus 141 a 141 (368)
T 1mda_H 141 F 141 (368)
T ss_dssp E
T ss_pred E
Confidence 5
No 226
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=97.84 E-value=5.4e-05 Score=76.50 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=70.0
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCC------------CCCCCCcEEEecccCcccccccCCcccCCCCc--cCCCCC
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE--FSGMTP 545 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~------------~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 545 (616)
+..+.+.+.+ +..+..++|+|.+... ....+.|+||++|++.+ ..++... | .
T Consensus 70 v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~--------~~g~~~~~~~---~- 135 (351)
T 2zsh_A 70 VFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSF--------AHSSANSAIY---D- 135 (351)
T ss_dssp EEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTT--------TSCCTTBHHH---H-
T ss_pred ceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcC--------cCCCCcchhH---H-
Confidence 3566677765 5668889999987531 01124599999944211 1111111 1 1
Q ss_pred chHHHHh-hCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC----CccCC-ceEEEe
Q 007140 546 TSSLIFL-ARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VGLPI-LYLNTT 608 (616)
Q Consensus 546 ~~~q~la-~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~----~vD~~-ri~~~~ 608 (616)
...+.|+ ++||+|+. ||| |+..+. |. ..++|+.++++||.++. .+|++ ||++.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~r-g~~~~~--~~------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G 196 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYR-RAPENP--YP------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAG 196 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCC-CTTTSC--TT------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEE
T ss_pred HHHHHHHHHcCCEEEEecCC-CCCCCC--Cc------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEE
Confidence 3346788 78999999 999 864432 12 46899999999999865 48999 999876
No 227
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.84 E-value=0.01 Score=56.55 Aligned_cols=223 Identities=12% Similarity=0.011 Sum_probs=112.1
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...+.++|||+ |.++.. .....|++++..++....+..... .....+.++++|+ |++...
T Consensus 26 p~~i~~~~~g~-l~v~~~--------~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~------ 85 (270)
T 1rwi_B 26 PSGVAVDSAGN-VYVTSE--------GMYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGT-VYVTDF------ 85 (270)
T ss_dssp EEEEEECTTCC-EEEEEC--------SSSCEEEEECC-----EECCCCSC----CSCCCEEECTTCC-EEEEET------
T ss_pred ccceEECCCCC-EEEEcc--------CCCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCC-EEEEcC------
Confidence 45778999997 444243 234688999877665444321111 1145778888888 444310
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCCC--CceeeeeECCCCcEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYV 189 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~--~~~~~~~~SpDg~~i 189 (616)
...|++++.++ ....+... .....++++|+|+ |
T Consensus 86 -------------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 121 (270)
T 1rwi_B 86 -------------------------------------------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-V 121 (270)
T ss_dssp -------------------------------------------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-E
T ss_pred -------------------------------------------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-E
Confidence 13566677754 33333222 2345789999987 5
Q ss_pred EEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
++.... ...|++++..+......... . ......+.++++|+ |++...
T Consensus 122 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~----~--------~~~p~~i~~~~~g~--l~v~~~------- 168 (270)
T 1rwi_B 122 YVADRG------------NNRVVKLAAGSKTQTVLPFT----G--------LNDPDGVAVDNSGN--VYVTDT------- 168 (270)
T ss_dssp EEEEGG------------GTEEEEECTTCCSCEECCCC----S--------CCSCCCEEECTTCC--EEEEEG-------
T ss_pred EEEECC------------CCEEEEEECCCceeEeeccc----c--------CCCceeEEEeCCCC--EEEEEC-------
Confidence 555332 13577776544332221110 0 01123577888886 544421
Q ss_pred cccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeeccccc
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 348 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~ 348 (616)
....++.++. .++......... .....+.+++||..++.+. . ...|++++.++. ....+......
T Consensus 169 ----~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~-~---~~~v~~~~~~~~--~~~~~~~~~~~- 234 (270)
T 1rwi_B 169 ----DNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH-N---TNQVVKLLAGST--TSTVLPFTGLN- 234 (270)
T ss_dssp ----GGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTCCEEEEET-T---TSCEEEECTTCS--CCEECCCCSCS-
T ss_pred ----CCCEEEEEec---CCCceEeecccCCCCceEEEECCCCCEEEEEC-C---CCcEEEEcCCCC--cceeeccCCCC-
Confidence 1234566665 433332221111 2345678889986555543 1 126889988763 22222111100
Q ss_pred ccCCCCCCCeeeCCCCCEEEEEee
Q 007140 349 VYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 349 ~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.+ ..++++++|+ +++...
T Consensus 235 ---~p--~~i~~~~~g~-l~v~~~ 252 (270)
T 1rwi_B 235 ---TP--LAVAVDSDRT-VYVADR 252 (270)
T ss_dssp ---CE--EEEEECTTCC-EEEEEG
T ss_pred ---Cc--eeEEECCCCC-EEEEEC
Confidence 00 1267788886 666543
No 228
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=97.83 E-value=5.1e-05 Score=77.03 Aligned_cols=106 Identities=15% Similarity=0.029 Sum_probs=71.1
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCC--ccCCCCCchHHHHhhCCeE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN--EFSGMTPTSSLIFLARRFA 557 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~q~la~~Gy~ 557 (616)
+..+.+++...||..|.+.+|.|.+.. + +.|+||++|++.+ ..++.. .| . .....|+++||+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~v~~p~~~~--~--~~p~vv~iHGgg~--------~~g~~~~~~~---~-~~~~~la~~g~~ 143 (361)
T 1jkm_A 80 VETSTETILGVDGNEITLHVFRPAGVE--G--VLPGLVYTHGGGM--------TILTTDNRVH---R-RWCTDLAAAGSV 143 (361)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTCC--S--CEEEEEEECCSTT--------TSSCSSSHHH---H-HHHHHHHHTTCE
T ss_pred ceeeeeeeecCCCCeEEEEEEeCCCCC--C--CCeEEEEEcCCcc--------ccCCCcccch---h-HHHHHHHhCCCE
Confidence 356677888889989999999998643 1 3599999944211 111111 11 1 336778889999
Q ss_pred EEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 558 VLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 558 Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
|+. ||| |..|+..+.. +.....|+.++++|+.+.- -+| ||+|.+
T Consensus 144 vv~~d~r-~~gg~~~~~~----~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G 191 (361)
T 1jkm_A 144 VVMVDFR-NAWTAEGHHP----FPSGVEDCLAAVLWVDEHRESLGLS--GVVVQG 191 (361)
T ss_dssp EEEEECC-CSEETTEECC----TTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEE
T ss_pred EEEEecC-CCCCCCCCCC----CCccHHHHHHHHHHHHhhHHhcCCC--eEEEEE
Confidence 999 999 8765432211 2346799999999998762 244 777765
No 229
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=97.83 E-value=3.1e-05 Score=72.04 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=70.3
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~V 558 (616)
+..+.++++. ||.++.++++.|.+ +. |+||+.++.. +....| .+ ...+.|+++||.|
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-----~~--p~vv~~hG~~-----------~~~~~~---~~~~~~~~l~~~G~~v 67 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-----AT--GIVLFAHGSG-----------SSRYSP---RNRYVAEVLQQAGLAT 67 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-----CC--EEEEEECCTT-----------CCTTCH---HHHHHHHHHHHHTCEE
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-----Cc--eEEEEecCCC-----------CCCCcc---chHHHHHHHHHCCCEE
Confidence 3567788886 99999999999975 12 7888873210 001111 11 3467899999999
Q ss_pred EE-CCCCCccccCCCccC-C----hh-HHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPN-D----RF-VEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~-~----~~-g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+. |+| |. |..-.. . .+ -....+|+.++++++..++.+|++++++-+
T Consensus 68 ~~~d~~-g~---g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 120 (223)
T 2o2g_A 68 LLIDLL-TQ---EEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFG 120 (223)
T ss_dssp EEECSS-CH---HHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEE
T ss_pred EEEcCC-Cc---CCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 99 999 73 321111 0 01 134468999999999999889999998765
No 230
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.82 E-value=0.002 Score=63.70 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=37.7
Q ss_pred cccceEEcc--CCCeEEEEEeeccccccCCCceeEEEEECCCCce----------EecccCCCccccccccceEEecC--
Q 007140 32 KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA----------KPLFESPDICLNAVFGSFVWVNN-- 97 (616)
Q Consensus 32 ~~~~~~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~----------~~lt~~~~~~~~~~~~~~~wspd-- 97 (616)
.+..+.|+| ||+.|+.... ...|.++++.+++. ..+.... ..+..+.|+|+
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~ 123 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASY----------DKTVKLWEEDPDQEECSGRRWNKLCTLNDSK-----GSLYSVKFAPAHL 123 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEET----------TSCEEEEEECTTSCTTSSCSEEEEEEECCCS-----SCEEEEEECCGGG
T ss_pred cEEEEEEcCCCCCCEEEEEcC----------CCeEEEEecCCCcccccccCcceeeeecccC-----CceeEEEEcCCCC
Confidence 578999999 6888776553 24667778776531 2221111 12568899999
Q ss_pred CcEEEEE
Q 007140 98 STLLIFT 104 (616)
Q Consensus 98 g~~l~~~ 104 (616)
++.|+..
T Consensus 124 ~~~l~~~ 130 (351)
T 3f3f_A 124 GLKLACL 130 (351)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 8877765
No 231
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=97.82 E-value=1.4e-05 Score=84.52 Aligned_cols=102 Identities=15% Similarity=0.073 Sum_probs=64.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCC-eEEEE-CCCCCcc
Q 007140 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLA-GPSIPII 567 (616)
Q Consensus 490 ~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~G-y~Vl~-n~R~GS~ 567 (616)
.|.+. ..++.|.+.. + ++|+|||+|+|.+. .++...+ . ...+.||++| |+|+. |||.|+.
T Consensus 80 edcL~--l~v~~P~~~~--~--~~PviV~iHGGg~~--------~g~~~~~---~-~~~~~la~~g~~vvv~~nYRlg~~ 141 (489)
T 1qe3_A 80 EDCLY--VNVFAPDTPS--Q--NLPVMVWIHGGAFY--------LGAGSEP---L-YDGSKLAAQGEVIVVTLNYRLGPF 141 (489)
T ss_dssp SCCCE--EEEEEECSSC--C--SEEEEEEECCSTTT--------SCCTTSG---G-GCCHHHHHHHTCEEEEECCCCHHH
T ss_pred CCCCE--EEEEeCCCCC--C--CCCEEEEECCCccc--------cCCCCCc---c-cCHHHHHhcCCEEEEecCccCccc
Confidence 34444 4688897622 2 25999999554321 1211111 1 2346788887 99999 9998887
Q ss_pred ccCCC--ccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 568 GEGDK--LPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 568 GyG~~--f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
||+.. +....-+...+.|+.++++|+.+.- -+|++||.|.+-
T Consensus 142 Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~ 188 (489)
T 1qe3_A 142 GFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 188 (489)
T ss_dssp HSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred ccCccccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEe
Confidence 88653 2211112335788899999987652 379999999763
No 232
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=97.82 E-value=4.1e-05 Score=75.93 Aligned_cols=101 Identities=18% Similarity=0.081 Sum_probs=69.2
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl 559 (616)
..+.+++++.|| +|.+++|.|.+- + +.|+||+.|++. ...++...| . .....|++ .||.|+
T Consensus 50 ~~~~~~i~~~~g-~~~~~~~~P~~~---~--~~p~vv~~HGgg--------~~~g~~~~~---~-~~~~~la~~~g~~v~ 111 (313)
T 2wir_A 50 RVEDITIPGRGG-PIRARVYRPRDG---E--RLPAVVYYHGGG--------FVLGSVETH---D-HVCRRLANLSGAVVV 111 (313)
T ss_dssp EEEEEEEEETTE-EEEEEEEECSCC---S--SEEEEEEECCST--------TTSCCTGGG---H-HHHHHHHHHHCCEEE
T ss_pred eEEEEEeeCCCC-cEEEEEEecCCC---C--CccEEEEECCCc--------ccCCChHHH---H-HHHHHHHHHcCCEEE
Confidence 677889998888 999999999762 2 248999994321 011111222 1 34566777 499999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
. ||| |.... .| ....+|+.++++||.+.. -+|++||+|-+
T Consensus 112 ~~d~r-g~g~~--~~------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G 155 (313)
T 2wir_A 112 SVDYR-LAPEH--KF------PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAG 155 (313)
T ss_dssp EEECC-CTTTS--CT------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred EeecC-CCCCC--CC------CchHHHHHHHHHHHHhHHHHhCCCcccEEEEE
Confidence 9 999 75332 12 246789999999998762 27888998876
No 233
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.82 E-value=0.034 Score=57.78 Aligned_cols=135 Identities=11% Similarity=0.026 Sum_probs=72.0
Q ss_pred eeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEE
Q 007140 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (616)
Q Consensus 180 ~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~ 258 (616)
..++++++.|+....+ ..|.+||+..++ ...+... ......+.|+|+++. |+
T Consensus 274 ~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~-l~ 326 (464)
T 3v7d_B 274 RTVSGHGNIVVSGSYD-------------NTLIVWDVAQMKCLYILSGH-------------TDRIYSTIYDHERKR-CI 326 (464)
T ss_dssp EEEEEETTEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEEETTTTE-EE
T ss_pred EEEcCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEecCC-------------CCCEEEEEEcCCCCE-EE
Confidence 4568889988877643 368899987554 3333221 111345789999873 32
Q ss_pred EEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCC
Q 007140 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 337 (616)
Q Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 337 (616)
... ....+.+|+. ..++.. .+.........+.|+ +..++.... ++ .|.++|+.+. .
T Consensus 327 -sg~-----------~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~--dg--~v~vwd~~~~--~ 383 (464)
T 3v7d_B 327 -SAS-----------MDTTIRIWDL---ENGELMYTLQGHTALVGLLRLS--DKFLVSAAA--DG--SIRGWDANDY--S 383 (464)
T ss_dssp -EEE-----------TTSCEEEEET---TTTEEEEEECCCSSCEEEEEEC--SSEEEEEET--TS--EEEEEETTTC--C
T ss_pred -EEe-----------CCCcEEEEEC---CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeC--CC--cEEEEECCCC--c
Confidence 211 2235666776 434333 233334455667776 344544331 23 5777788763 2
Q ss_pred ceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 338 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 338 ~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
........ . ......++++|+.++...
T Consensus 384 ~~~~~~~~--~-----~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 384 RKFSYHHT--N-----LSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEEECT--T-----CCCEEEEEECSSEEEEEE
T ss_pred eeeeecCC--C-----CccEEEEEeCCCEEEEec
Confidence 22111111 0 112267888998766543
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.81 E-value=0.003 Score=60.61 Aligned_cols=199 Identities=12% Similarity=0.054 Sum_probs=112.0
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.|+|+++.|.++- .....|++++++++..+.+....- .....+.++++++.|+++-.
T Consensus 37 ~~~gi~~d~~~~~ly~~d---------~~~~~I~~~~~~g~~~~~~~~~~~----~~p~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTD---------ISEPSIGRASLHGGEPTTIIRQDL----GSPEGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEE---------TTTTEEEEEESSSCCCEEEECTTC----CCEEEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEE---------CCCCEEEEEecCCCCcEEEEECCC----CCccEEEEEecCCeEEEEEC-----
Confidence 356889999999877753 245789999998776544432110 11457788888887777510
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~ 188 (616)
...+|++++++|+ .+.+... ..-..++++|++.+
T Consensus 99 -------------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~ 135 (267)
T 1npe_A 99 -------------------------------------------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGN 135 (267)
T ss_dssp -------------------------------------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTE
T ss_pred -------------------------------------------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCE
Confidence 1246777777663 3333221 23457899999888
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|+++..... ...|++++.++...+.+..... .....+.+++++. .||+...
T Consensus 136 lyv~~~~~~----------~~~I~~~~~dg~~~~~~~~~~~------------~~P~gia~d~~~~-~lyv~d~------ 186 (267)
T 1npe_A 136 LYWTDWNRD----------NPKIETSHMDGTNRRILAQDNL------------GLPNGLTFDAFSS-QLCWVDA------ 186 (267)
T ss_dssp EEEEECCSS----------SCEEEEEETTSCCCEEEECTTC------------SCEEEEEEETTTT-EEEEEET------
T ss_pred EEEEECCCC----------CcEEEEEecCCCCcEEEEECCC------------CCCcEEEEcCCCC-EEEEEEC------
Confidence 888854311 2368888888765554432111 0123578899876 3766521
Q ss_pred ccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
..+.++.++. +++..+.+....... ...+.|+..++...+. ..+|++++.++
T Consensus 187 -----~~~~I~~~~~---~g~~~~~~~~~~~~P--~gi~~d~~~lyva~~~---~~~v~~~d~~~ 238 (267)
T 1npe_A 187 -----GTHRAECLNP---AQPGRRKVLEGLQYP--FAVTSYGKNLYYTDWK---TNSVIAMDLAI 238 (267)
T ss_dssp -----TTTEEEEEET---TEEEEEEEEECCCSE--EEEEEETTEEEEEETT---TTEEEEEETTT
T ss_pred -----CCCEEEEEec---CCCceEEEecCCCCc--eEEEEeCCEEEEEECC---CCeEEEEeCCC
Confidence 2245666665 432222222211111 1223344444333322 22788888876
No 235
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=97.81 E-value=2.6e-05 Score=75.96 Aligned_cols=107 Identities=11% Similarity=0.010 Sum_probs=70.0
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCC---CCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCe
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGY---DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~---~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy 556 (616)
...+.|.|+..+|..+...+| |+.. .+++ +.|+||+++++.+ ..+....| . ...+.|+++||
T Consensus 17 ~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~--~~p~vv~lHGgg~--------~~~~~~~~---~-~~~~~l~~~G~ 81 (283)
T 3bjr_A 17 FQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQT--NLPAIIIVPGGSY--------THIPVAQA---E-SLAMAFAGHGY 81 (283)
T ss_dssp CCSSEEEEEECTTSSCEEEEE-EC--------C--CEEEEEEECCSTT--------TCCCHHHH---H-HHHHHHHTTTC
T ss_pred CCCcceEEeecCCCceeEEEe-cCCccccccCC--CCcEEEEECCCcc--------ccCCcccc---H-HHHHHHHhCCc
Confidence 377779999999998888999 7762 1323 3489998833110 00000111 1 34678999999
Q ss_pred EEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 557 AVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 557 ~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
.|+. |+| |+...+..+. ....|+.+++++|.+.. -+|++||++.+
T Consensus 82 ~v~~~d~~-g~~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G 130 (283)
T 3bjr_A 82 QAFYLEYT-LLTDQQPLGL------APVLDLGRAVNLLRQHAAEWHIDPQQITPAG 130 (283)
T ss_dssp EEEEEECC-CTTTCSSCBT------HHHHHHHHHHHHHHHSHHHHTEEEEEEEEEE
T ss_pred EEEEEecc-CCCccccCch------hHHHHHHHHHHHHHHHHHHhCCCcccEEEEE
Confidence 9999 999 8544321222 45789999999998763 47888988765
No 236
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=97.78 E-value=2e-05 Score=76.56 Aligned_cols=113 Identities=12% Similarity=0.159 Sum_probs=65.6
Q ss_pred ceeEEEEE-CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKYQ-RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~-~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.+++. ..+|.++...||+|+++++ + +.|+||+.|++. +....|.... ...++++++||+|+
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~-~--~~p~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv 79 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAET-G--KCPALYWLSGLT-----------CTEQNFISKS-GYHQSASEHGLVVI 79 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGT-S--CEEEEEEECCTT-----------CCSHHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCCC-C--CCCEEEEEcCCC-----------CCccchhhcc-hHHHHhhcCCeEEE
Confidence 33444444 5578999999999998765 2 348999884321 0001221001 22578999999999
Q ss_pred E-CC--CCCccccCCC-----------ccC---ChhHH--HHHHHHHHHHHHHHH-cCCccCCceEEEee
Q 007140 560 A-GP--SIPIIGEGDK-----------LPN---DRFVE--QLVSSAEAAVEEVVR-RGVGLPILYLNTTA 609 (616)
Q Consensus 560 ~-n~--R~GS~GyG~~-----------f~~---~~~g~--~~~~D~~~~v~~l~~-~~~vD~~ri~~~~~ 609 (616)
. |+ | |..+.|.. |.. ..|.. ...+++++.+..+++ +--+|++||+|.+-
T Consensus 80 ~~d~~~r-G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~ 148 (282)
T 3fcx_A 80 APDTSPR-GCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGH 148 (282)
T ss_dssp EECSCSS-CCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEE
T ss_pred EeccccC-ccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEE
Confidence 9 98 8 87765433 222 23322 234445544444443 43389999998763
No 237
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=97.76 E-value=7.7e-05 Score=73.79 Aligned_cols=101 Identities=20% Similarity=0.150 Sum_probs=69.6
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC-CeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~-Gy~Vl 559 (616)
..+.+++++.|| +|.+++|+|.+-. +.|+||++|++ +.+.++...| . .....|+.+ ||.|+
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~~~-----~~p~vv~~HGg--------g~~~g~~~~~---~-~~~~~la~~~g~~v~ 108 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKKAA-----GLPAVLYYHGG--------GFVFGSIETH---D-HICRRLSRLSDSVVV 108 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSCS-----SEEEEEEECCS--------TTTSCCTGGG---H-HHHHHHHHHHTCEEE
T ss_pred eEEEEEecCCCC-cEEEEEEecCCCC-----CCcEEEEECCC--------cccCCChhhh---H-HHHHHHHHhcCCEEE
Confidence 778889998888 9999999997632 24899998432 1011111222 1 345677776 99999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
. ||| |.... .|. ...+|+.++++||.+.. -+|++||+|-+
T Consensus 109 ~~d~r-g~g~~--~~~------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G 152 (311)
T 2c7b_A 109 SVDYR-LAPEY--KFP------TAVEDAYAALKWVADRADELGVDPDRIAVAG 152 (311)
T ss_dssp EECCC-CTTTS--CTT------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred EecCC-CCCCC--CCC------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEe
Confidence 9 999 86433 122 35789999999998762 37889998876
No 238
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.74 E-value=0.0061 Score=59.64 Aligned_cols=65 Identities=8% Similarity=-0.021 Sum_probs=35.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC-Cc
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN-ST 99 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd-g~ 99 (616)
....++|+|||+ |++....... .......|+++++.+|+.+.+..............+.+++| |+
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~~~--~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEVEV--NGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ 84 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTCEE--TTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE
T ss_pred CccCceECCCCC-EEEEEecccc--CCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc
Confidence 357899999996 5555100000 00123579999988888766543100000111446778888 65
No 239
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=97.74 E-value=0.00031 Score=67.69 Aligned_cols=110 Identities=16% Similarity=0.175 Sum_probs=66.2
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCC-C-C-chHHHHhhC--
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM-T-P-TSSLIFLAR-- 554 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~q~la~~-- 554 (616)
..+.+++.+. +|.++..++|+|+++++.+++ |+||+.|++. +....|... . . ...+.|+++
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~--P~vv~lHG~g-----------~~~~~~~~~~~~~~~~~~~l~~~g~ 97 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPGYSKDKKY--SVLYLLHGIG-----------GSENDWFEGGGRANVIADNLIAEGK 97 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCCTTSCB--CEEEEECCTT-----------CCTTTTTTTTTCHHHHHHHHHHTTS
T ss_pred eEEEEEEeccccCCceEEEEEeCCCCCCCCCc--cEEEEECCCC-----------CCcchhhhccccHHHHHHHHHHcCC
Confidence 6667777654 678999999999998776555 8888884321 001223211 0 0 124567776
Q ss_pred --CeEEEE-CCCCCccccCCCccCChhHHHHHHH-HHHHHHHHHHcCC--ccCCceEEEee
Q 007140 555 --RFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSS-AEAAVEEVVRRGV--GLPILYLNTTA 609 (616)
Q Consensus 555 --Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D-~~~~v~~l~~~~~--vD~~ri~~~~~ 609 (616)
||+|+. |+| +.. .+ . ...|... .+| +.+.++++.++-- +|++||+|.+-
T Consensus 98 ~~~~~vv~~d~~-~~~-~~--~-~~~~~~~-~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~ 152 (268)
T 1jjf_A 98 IKPLIIVTPNTN-AAG-PG--I-ADGYENF-TKDLLNSLIPYIESNYSVYTDREHRAIAGL 152 (268)
T ss_dssp SCCCEEEEECCC-CCC-TT--C-SCHHHHH-HHHHHHTHHHHHHHHSCBCCSGGGEEEEEE
T ss_pred CCCEEEEEeCCC-CCC-cc--c-cccHHHH-HHHHHHHHHHHHHhhcCCCCCCCceEEEEE
Confidence 599999 999 742 11 1 1233222 233 4455666665532 49999999873
No 240
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.72 E-value=0.0032 Score=64.33 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=28.9
Q ss_pred eEEEEeC-CC-Ceee-cCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 158 QLVLGSL-DG-TAKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 158 ~l~~~d~-~g-~~~~-l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
.+.++|+ ++ .... +.....+..++|+|++..++++.... ..+.+||+..+
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d------------~~v~~wd~~t~ 219 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN------------GNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT------------SEEEEEETTCC
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC------------CEEEEEECCCC
Confidence 3445555 33 2222 22333456899999987655554332 36888888654
No 241
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=97.71 E-value=8.1e-05 Score=74.16 Aligned_cols=104 Identities=16% Similarity=0.111 Sum_probs=70.6
Q ss_pred CceeEEEEECCCCc-EEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeE
Q 007140 480 LQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (616)
Q Consensus 480 ~~~e~i~~~~~DG~-~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~ 557 (616)
+..+.+++.+.||. +|.+++|.|.+-. .+.|+||++|++. .+.++...| . .....|+. .||.
T Consensus 49 ~~~~~~~i~~~~g~~~l~~~~~~P~~~~----~~~p~vv~~HGgg--------~~~g~~~~~---~-~~~~~la~~~G~~ 112 (323)
T 1lzl_A 49 VSLRELSAPGLDGDPEVKIRFVTPDNTA----GPVPVLLWIHGGG--------FAIGTAESS---D-PFCVEVARELGFA 112 (323)
T ss_dssp EEEEEEEECCSTTCCCEEEEEEEESSCC----SCEEEEEEECCST--------TTSCCGGGG---H-HHHHHHHHHHCCE
T ss_pred ceEEEEEecCCCCCceeEEEEEecCCCC----CCCcEEEEECCCc--------cccCChhhh---H-HHHHHHHHhcCcE
Confidence 47788899999997 8999999997632 2348999984321 111111122 1 33456776 5999
Q ss_pred EEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc---CCccCCceEEEe
Q 007140 558 VLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVGLPILYLNTT 608 (616)
Q Consensus 558 Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~---~~vD~~ri~~~~ 608 (616)
|+. ||| |.... .|. ...+|+.++++||.+. --+|++||+|-+
T Consensus 113 Vv~~d~r-g~~~~--~~~------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G 158 (323)
T 1lzl_A 113 VANVEYR-LAPET--TFP------GPVNDCYAALLYIHAHAEELGIDPSRIAVGG 158 (323)
T ss_dssp EEEECCC-CTTTS--CTT------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred EEEecCC-CCCCC--CCC------chHHHHHHHHHHHHhhHHHcCCChhheEEEe
Confidence 999 999 75332 122 3578999999999874 237889998866
No 242
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=97.70 E-value=1.6e-05 Score=74.84 Aligned_cols=103 Identities=18% Similarity=0.100 Sum_probs=68.0
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-C
Q 007140 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-G 561 (616)
Q Consensus 483 e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n 561 (616)
+.+++++.||.+++++++.|.+ + +.|+||+.++. .+....| . ...+.|+++||.|+. |
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~----~--~~p~vv~~hG~-----------~~~~~~~---~-~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK----A--PAPVIVIAQDI-----------FGVNAFM---R-ETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS----C--SEEEEEEECCT-----------TBSCHHH---H-HHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC----C--CCCEEEEEcCC-----------CCCCHHH---H-HHHHHHHhCCcEEEecc
Confidence 4467888899999999999974 1 23888888321 0111112 1 446789999999999 9
Q ss_pred CCCCccccCCCccCC----------hhH----HHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 562 PSIPIIGEGDKLPND----------RFV----EQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 562 ~R~GS~GyG~~f~~~----------~~g----~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+| |....+..+... .++ ....+|+.+++++|.++..++ +||++.+
T Consensus 63 ~~-g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G 121 (236)
T 1zi8_A 63 LY-ARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVG 121 (236)
T ss_dssp GG-GGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEE
T ss_pred cc-ccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEE
Confidence 99 754333221111 011 235789999999999887666 6887765
No 243
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=97.70 E-value=3.1e-05 Score=82.49 Aligned_cols=104 Identities=11% Similarity=0.090 Sum_probs=67.2
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHH--hhCCeEEEE-CCCCC
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF--LARRFAVLA-GPSIP 565 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~l--a~~Gy~Vl~-n~R~G 565 (616)
+.|.+.+ .+|.|.+..+++ ++|+|||+|+|.+ ..++...| . . ..+. +.+|++|+. |||.|
T Consensus 82 ~edcl~l--~v~~P~~~~~~~--~~Pviv~iHGGg~--------~~g~~~~~---~-~-~~~~~~~~~g~vvv~~nYRlg 144 (522)
T 1ukc_A 82 SEDCLFI--NVFKPSTATSQS--KLPVWLFIQGGGY--------AENSNANY---N-G-TQVIQASDDVIVFVTFNYRVG 144 (522)
T ss_dssp ESCCCEE--EEEEETTCCTTC--CEEEEEEECCSTT--------TSCCSCSC---C-C-HHHHHHTTSCCEEEEECCCCH
T ss_pred CCcCCEE--EEEECCCCCCCC--CCCEEEEECCCcc--------ccCCcccc---C-c-HHHHHhcCCcEEEEEeccccc
Confidence 4466555 588898765443 3599999965432 22222222 1 1 2222 256999999 99988
Q ss_pred ccccCCCccC--ChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 566 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 566 S~GyG~~f~~--~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
..||+..-.. ..-+...+.|+.+|++|+.+.- -.||+||.|-+-
T Consensus 145 ~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~ 193 (522)
T 1ukc_A 145 ALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGV 193 (522)
T ss_dssp HHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred ccccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEE
Confidence 8888764221 1012456899999999998762 279999999763
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.68 E-value=0.021 Score=58.36 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=39.3
Q ss_pred ccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeeccccccc---------CCCCC-CCeeeCCCCCEEEEE
Q 007140 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY---------SDPGS-PMMTRTSTGTNVIAK 370 (616)
Q Consensus 301 ~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~---------~~~g~-~~~~~s~dgk~l~~~ 370 (616)
...+.+|+||+.|+...+. ...|.++|+... .+++++-.-.....+ ...+. ..+..|+||++||++
T Consensus 323 pa~I~lS~DGrfLYVSnrg---~d~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWG---IGEVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCEEECTTSCEEEEEETT---TTEEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEE
T ss_pred eeEEEECCCCCEEEEEeCC---CCEEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEE
Confidence 4568899999987665543 236888887532 344544211111000 00112 258999999999987
Q ss_pred e
Q 007140 371 I 371 (616)
Q Consensus 371 ~ 371 (616)
.
T Consensus 399 N 399 (462)
T 2ece_A 399 N 399 (462)
T ss_dssp C
T ss_pred c
Confidence 5
No 245
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0021 Score=66.57 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=38.7
Q ss_pred cccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCC---CceE--ecc-cCCCccccccccceEEecCCcEEEEE
Q 007140 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAK--PLF-ESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~---g~~~--~lt-~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
.+..++||| ||+.|+..+. ...|.++++.+ +... .++ .+.. .+..+.|+|+++.|+..
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~----------dg~v~vwd~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSD----------QGVIKIWNLKEIIVGEVYSSSLTYDCSS-----TVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CEEEEEEECSSSCEEEEEET----------TSEEEEEEHHHHHTTCCCSCSEEEECSS-----CEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCCEEEEecC----------CceEEEeECcccccCcccceeeeccCCC-----CEEEEEEeCCCCEEEEE
Confidence 588999999 9998876652 25677778765 4311 111 1111 26689999999987775
No 246
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=97.67 E-value=2.3e-05 Score=84.24 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=67.8
Q ss_pred EECCCCcEEEEEEEcCCCCC-CCCCCCCcEEEecccCcccccccCCcccCCCCc--cCCCCCchHHHHhhC-CeEEEE-C
Q 007140 487 YQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE--FSGMTPTSSLIFLAR-RFAVLA-G 561 (616)
Q Consensus 487 ~~~~DG~~l~g~l~~P~~~~-~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~la~~-Gy~Vl~-n 561 (616)
+.+.|.+.|. +|.|.+.. +++ ++|+|||+|+|.+. .|+... +........+.||.+ |++|+. |
T Consensus 75 ~~sedcl~ln--v~~P~~~~~~~~--~~PV~v~iHGGg~~--------~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~n 142 (579)
T 2bce_A 75 YGNEDCLYLN--IWVPQGRKEVSH--DLPVMIWIYGGAFL--------MGASQGANFLSNYLYDGEEIATRGNVIVVTFN 142 (579)
T ss_dssp ESCSCCCEEE--EEEEECSSSCCC--SEEEEEECCCCSEE--------EC-------CTTGGGCCHHHHHHHTCEEEEEC
T ss_pred CCCCCCCEEE--EEECCCCCCCCC--CCeEEEEECCCccc--------CCCCCccccccccccChHHHhcCCCEEEEEeC
Confidence 3456777775 77887653 233 45999999665332 222111 100000113456655 699999 9
Q ss_pred CCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHc--C-CccCCceEEEee
Q 007140 562 PSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRR--G-VGLPILYLNTTA 609 (616)
Q Consensus 562 ~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~--~-~vD~~ri~~~~~ 609 (616)
||.|..||...... +++| +.|+.+|++|+.+. . -+||+||.|.+-
T Consensus 143 YRLg~~Gfl~~~~~~~pgn~g---l~D~~~Al~wv~~ni~~fGgDp~~Vti~G~ 193 (579)
T 2bce_A 143 YRVGPLGFLSTGDSNLPGNYG---LWDQHMAIAWVKRNIEAFGGDPDQITLFGE 193 (579)
T ss_dssp CCCHHHHHCCCSSTTCCCCHH---HHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred CccccccCCcCCCCCCCCccc---hHHHHHHHHHHHHHHHHhCCCcccEEEecc
Confidence 99888888664322 4554 78999999999875 2 279999999873
No 247
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=97.67 E-value=2.6e-05 Score=83.61 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCCcEEEEEEEcCC----CCCCCCC--CCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-C
Q 007140 489 RKDGVPLTATLYLPP----GYDQSKD--GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-G 561 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~----~~~~~kk--~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n 561 (616)
+.|.+.+ -+|.|. ...++++ .++|+|||+|+|.+. .++.... . ...+.|+++|++|+. |
T Consensus 87 ~edcL~l--nv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~--------~g~~~~~---~-~~~~~l~~~g~vvv~~n 152 (551)
T 2fj0_A 87 SEACIHA--NIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFA--------FGSGDSD---L-HGPEYLVSKDVIVITFN 152 (551)
T ss_dssp CSCCCEE--EEEEEGGGCCCC--------CEEEEEEECCSTTT--------SCCSCTT---T-CBCTTGGGGSCEEEEEC
T ss_pred CCCCeEE--EEEecCccccccccccCcCCCCCEEEEEcCCccc--------cCCCccc---c-cCHHHHHhCCeEEEEeC
Confidence 3455555 577782 1122222 026999999654321 2221111 1 234678899999999 9
Q ss_pred CCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC--C-ccCCceEEEe
Q 007140 562 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG--V-GLPILYLNTT 608 (616)
Q Consensus 562 ~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~--~-vD~~ri~~~~ 608 (616)
||.|..||........-+...+.|+.+|++|+.+.- + +|++||.|.+
T Consensus 153 YRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G 202 (551)
T 2fj0_A 153 YRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMG 202 (551)
T ss_dssp CCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEE
T ss_pred CcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEE
Confidence 997777886654322223456899999999998762 2 7999999876
No 248
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.67 E-value=0.05 Score=56.43 Aligned_cols=52 Identities=6% Similarity=0.021 Sum_probs=32.8
Q ss_pred EEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEE
Q 007140 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIF 103 (616)
Q Consensus 37 ~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~ 103 (616)
.+++++++|+..+. ...|.++++.+++........... +..+.|+|++ .|+.
T Consensus 127 ~~~~~~~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~h~~~----V~~l~~~~~~-~l~s 178 (464)
T 3v7d_B 127 CLQFEDNYVITGAD----------DKMIRVYDSINKKFLLQLSGHDGG----VWALKYAHGG-ILVS 178 (464)
T ss_dssp EEEEETTEEEEEET----------TSCEEEEETTTTEEEEEECCCSSC----EEEEEECSTT-EEEE
T ss_pred EEEECCCEEEEEcC----------CCcEEEEECCCCcEEEEEeCCCcC----EEEEEEcCCC-EEEE
Confidence 56778887665442 357788899888754433222222 6688999988 4433
No 249
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=97.63 E-value=6e-05 Score=80.48 Aligned_cols=103 Identities=15% Similarity=0.166 Sum_probs=66.5
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEEE-CCCCCc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA-GPSIPI 566 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl~-n~R~GS 566 (616)
+.|.+.|. +|.|.... + ++|+|||+|+|.+. .++.... . .....||+ +|++|+. |||.|.
T Consensus 89 ~edcl~ln--v~~P~~~~--~--~~Pv~v~iHGGg~~--------~g~~~~~---~-~~~~~la~~~~~vvv~~nYRlg~ 150 (529)
T 1p0i_A 89 SEDCLYLN--VWIPAPKP--K--NATVLIWIYGGGFQ--------TGTSSLH---V-YDGKFLARVERVIVVSMNYRVGA 150 (529)
T ss_dssp CSCCCEEE--EEEESSCC--S--SEEEEEEECCSTTT--------SCCTTCG---G-GCTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCeEE--EeeCCCCC--C--CCeEEEEECCCccc--------cCCCCcc---c-cChHHHhccCCeEEEEecccccc
Confidence 45777665 67886543 2 35999999654321 2221111 0 22356776 7999999 999888
Q ss_pred cccCCCc-cCChhHHHHHHHHHHHHHHHHHc--C-CccCCceEEEee
Q 007140 567 IGEGDKL-PNDRFVEQLVSSAEAAVEEVVRR--G-VGLPILYLNTTA 609 (616)
Q Consensus 567 ~GyG~~f-~~~~~g~~~~~D~~~~v~~l~~~--~-~vD~~ri~~~~~ 609 (616)
.||+... ....-+...+.|+.+|++|+.+. . -.||+||.|.+-
T Consensus 151 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~ 197 (529)
T 1p0i_A 151 LGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGE 197 (529)
T ss_dssp HHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred cccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeec
Confidence 8887541 11111233589999999999875 1 279999998763
No 250
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=97.63 E-value=7.1e-05 Score=79.97 Aligned_cols=103 Identities=13% Similarity=0.101 Sum_probs=67.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh-hCCeEEEE-CCCCCc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLA-GPSIPI 566 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la-~~Gy~Vl~-n~R~GS 566 (616)
+.|.+.|. ++.|.+.. + ++|+|||+|+|.+. .|+.... . ...+.|| .+|++|+. |||.|.
T Consensus 91 sedcl~ln--v~~P~~~~--~--~~Pv~v~iHGG~~~--------~g~~~~~---~-~~~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDCLYLN--IWVPSPRP--K--STTVMVWIYGGGFY--------SGSSTLD---V-YNGKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCCCEEE--EEECSSCC--S--SEEEEEEECCSTTT--------CCCTTCG---G-GCTHHHHHHHTCEEEECCCCCHH
T ss_pred CCcCCeEE--EeccCCCC--C--CCeEEEEECCCccc--------CCCCCCC---c-cChHHHHhcCCEEEEEeccCccc
Confidence 55777775 67787542 2 45999999654322 2221111 0 1235666 88999999 999888
Q ss_pred cccCCC-ccCChhHHHHHHHHHHHHHHHHHcC--C-ccCCceEEEee
Q 007140 567 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRRG--V-GLPILYLNTTA 609 (616)
Q Consensus 567 ~GyG~~-f~~~~~g~~~~~D~~~~v~~l~~~~--~-vD~~ri~~~~~ 609 (616)
.||... .....-|...+.|+.+|++|+.+.- + .||+||.|.+-
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~ 199 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGE 199 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEec
Confidence 888654 1111112335899999999998762 2 79999998763
No 251
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.62 E-value=0.012 Score=60.38 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=35.2
Q ss_pred eEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEE
Q 007140 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 36 ~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
+.|+|+|+.|+.... .+...||+++..++.. +.+....... ......+.++|++..|++.
T Consensus 176 ia~~~~g~~l~~~d~--------~~~~~I~~~d~~~~~~~~~~g~~~~~~-~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGW--------EGTHTVYVYMKASGWAPTRIGQLGSTF-SGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp CEECTTSSEEEEEBS--------STTCEEEEEEGGGTTCEEEEEECCTTS-CSCCCBCEECTTSSEEEEE
T ss_pred eeEecCCCcEEEEec--------CCCceEEEEEcCCCceeEEeeeccchh-cCCcEEEEEeCCCCeEEEE
Confidence 899999997665532 2334899999887653 3331110000 0114578889966666663
No 252
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=97.62 E-value=0.00017 Score=68.99 Aligned_cols=113 Identities=11% Similarity=0.060 Sum_probs=65.8
Q ss_pred ceeEEEEEC-CCCcEEEEEEEcCCCCC----CCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCC
Q 007140 481 QKEMIKYQR-KDGVPLTATLYLPPGYD----QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555 (616)
Q Consensus 481 ~~e~i~~~~-~DG~~l~g~l~~P~~~~----~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~G 555 (616)
..+.+++.+ .+|.++.++||+|++++ +.+ +.|+||+.++.. ++...|.... ....+++..|
T Consensus 6 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~--~~p~vv~~HG~~-----------~~~~~~~~~~-~~~~~~~~~~ 71 (263)
T 2uz0_A 6 AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECE--DIPVLYLLHGMS-----------GNHNSWLKRT-NVERLLRGTN 71 (263)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECC---------C--CBCEEEEECCTT-----------CCTTHHHHHS-CHHHHTTTCC
T ss_pred eEeEEEEechhhCCceeEEEEeCCCccccCCcCC--CCCEEEEECCCC-----------CCHHHHHhcc-CHHHHHhcCC
Confidence 345566664 46789999999999983 223 348888884310 1112221100 1234455689
Q ss_pred eEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 556 FAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 556 y~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
|+|+. |+| ++ ++...-....+-....+|+...++++..+..+|++||+|.+-
T Consensus 72 ~~v~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~ 124 (263)
T 2uz0_A 72 LIVVMPNTS-NG-WYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGL 124 (263)
T ss_dssp CEEEECCCT-TS-TTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEE
T ss_pred eEEEEECCC-CC-ccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEE
Confidence 99999 999 76 332211123333455677777777765545679999998763
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.61 E-value=0.03 Score=56.90 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=90.2
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.|++.+++|.++- .....|++++++++..+.+....... ...+++.+.+..|+++-.
T Consensus 117 ~~~gl~~d~~~~~ly~~D---------~~~~~I~r~~~~g~~~~~~~~~~~~~----p~glavd~~~g~lY~~d~----- 178 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSD---------VTLDRILRANLNGSNVEEVVSTGLES----PGGLAVDWVHDKLYWTDS----- 178 (386)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCCEEEEECSSCSC----CCCEEEETTTTEEEEEET-----
T ss_pred ccEEEEEecCCCeEEEEe---------CCCCcEEEEecCCCCcEEEEeCCCCC----ccEEEEEeCCCeEEEEcC-----
Confidence 466789999888877753 23578999999887655553221111 346777777777777511
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~ 188 (616)
...+|++++++|. .+.+... ..-..+++.|++.+
T Consensus 179 -------------------------------------------~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 179 -------------------------------------------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp -------------------------------------------TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred -------------------------------------------CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 1235677777663 3333222 23357899999999
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEE
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
|+++.... ...|++++.+|...+.+....+. ....+.++|++. .|||+
T Consensus 216 ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~~------------~PnGlavd~~~~-~lY~a 263 (386)
T 3v65_B 216 IYWTDWGN-----------TPRIEASSMDGSGRRIIADTHLF------------WPNGLTIDYAGR-RMYWV 263 (386)
T ss_dssp EEEEECSS-----------SCEEEEEETTSCSCEEEECSSCS------------CEEEEEEEGGGT-EEEEE
T ss_pred EEEeccCC-----------CCEEEEEeCCCCCcEEEEECCCC------------CeeeEEEeCCCC-EEEEE
Confidence 99886432 24799999998766655431110 012578888775 48877
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.60 E-value=0.053 Score=54.22 Aligned_cols=179 Identities=11% Similarity=0.075 Sum_probs=105.9
Q ss_pred eeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccccc
Q 007140 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (616)
Q Consensus 62 ~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (616)
..|+.+++++.+...+...... ...+.|.+.++.|+++-.
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~-----~~~l~~d~~~~~ly~~D~----------------------------------- 92 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSDV----------------------------------- 92 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSC-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred cceEEEeCCCCeeEEeecCCCc-----eEEEEEeccccEEEEEec-----------------------------------
Confidence 5688888887766555322211 357889988888877510
Q ss_pred ccCCCcccceeEeccceEEEEeCCC-CeeecCCC--CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC
Q 007140 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (616)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~--~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 218 (616)
....|++++++| ..+.+... .....+++.+.+..|+++... ...|++++++|
T Consensus 93 -------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~dG 147 (349)
T 3v64_C 93 -------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLDG 147 (349)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTS
T ss_pred -------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC------------CCeEEEEcCCC
Confidence 124678888865 44443222 223478888888888888543 23788999988
Q ss_pred ceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc
Q 007140 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (616)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~ 298 (616)
+..+.+....+ .....+...|++. .|||.... ....++.++. ++...+.+....
T Consensus 148 ~~~~~l~~~~l------------~~P~~iavdp~~g-~ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~~ 201 (349)
T 3v64_C 148 AHRKVLLWQSL------------EKPRAIALHPMEG-TIYWTDWG----------NTPRIEASSM---DGSGRRIIADTH 201 (349)
T ss_dssp CSCEEEECTTC------------SCEEEEEEETTTT-EEEEEECS----------SSCEEEEEET---TSCSCEESCCSS
T ss_pred CceEEEEeCCC------------CCcceEEEecCcC-eEEEeccC----------CCCEEEEEeC---CCCCcEEEEECC
Confidence 76555432111 0123567777654 47776321 1245666665 543444443322
Q ss_pred -ccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 299 -LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 299 -~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
.....++|+|++..|++.+.. ..+|+.+++++.
T Consensus 202 ~~~PnGla~d~~~~~lY~aD~~---~~~I~~~~~dG~ 235 (349)
T 3v64_C 202 LFWPNGLTIDYAGRRMYWVDAK---HHVIERANLDGS 235 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETT---TTEEEEEETTSC
T ss_pred CCCcceEEEeCCCCEEEEEECC---CCEEEEEeCCCC
Confidence 234568899877666554422 238999999873
No 255
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.60 E-value=0.0033 Score=62.78 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=44.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEE--ecCCcEEEEEe
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW--VNNSTLLIFTI 105 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~w--spdg~~l~~~~ 105 (616)
.+..+.|+|||++|+.... ...|.++++.+++...+..... . +..+.| +|+++.|+...
T Consensus 88 ~v~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~-~----v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASC----------DKTAKMWDLSSNQAIQIAQHDA-P----VKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECSS-C----EEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcC----------CCcEEEEEcCCCCceeeccccC-c----eEEEEEEeCCCCCEEEEcc
Confidence 5889999999999886542 3578888999988776654433 2 668899 88888777653
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.59 E-value=0.084 Score=53.58 Aligned_cols=169 Identities=11% Similarity=0.067 Sum_probs=97.4
Q ss_pred ccceEEEEeCCC-CeeecCC-CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC
Q 007140 155 TTAQLVLGSLDG-TAKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (616)
Q Consensus 155 ~~~~l~~~d~~g-~~~~l~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (616)
....|.++++++ +...+.. ......++|++.+..|+++... ...|++++++++..+.+....+.
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~~-- 159 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGLE-- 159 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSCS--
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCCC--
Confidence 346789999965 5554433 2345689999988899888543 23799999988765554321110
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCc
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSL 311 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~ 311 (616)
....+...+.+. .|||... ..+.+.+++. +++..+.+.... .....+++.|++.
T Consensus 160 ----------~p~glavd~~~g-~lY~~d~-----------~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 160 ----------SPGGLAVDWVHD-KLYWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp ----------CCCCEEEETTTT-EEEEEET-----------TTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ----------CccEEEEEeCCC-eEEEEcC-----------CCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCC
Confidence 122455555444 4777631 1235555565 543434443322 3345567887765
Q ss_pred eEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.|++..+.. ..+|+++++++. ..+.+....+.. |. .++++++++.||+...
T Consensus 215 ~ly~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~----Pn--Glavd~~~~~lY~aD~ 265 (386)
T 3v65_B 215 TIYWTDWGN--TPRIEASSMDGS--GRRIIADTHLFW----PN--GLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEEEECSS--SCEEEEEETTSC--SCEEEECSSCSC----EE--EEEEEGGGTEEEEEET
T ss_pred eEEEeccCC--CCEEEEEeCCCC--CcEEEEECCCCC----ee--eEEEeCCCCEEEEEEC
Confidence 555544332 248999999873 334443322211 11 1788888888888763
No 257
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=97.59 E-value=0.00026 Score=69.64 Aligned_cols=99 Identities=7% Similarity=-0.015 Sum_probs=64.4
Q ss_pred eeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-
Q 007140 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA- 560 (616)
Q Consensus 482 ~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~- 560 (616)
.+.|.|. +..+...+|+|.+-. + +.|+||++|++.+ ..+....| . ...+.|+++||+|+.
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~~--~--~~p~vv~~HGgg~--------~~~~~~~~---~-~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKTT--N--QAPLFVFVHGGYW--------QEMDMSMS---C-SIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTCC--T--TCCEEEEECCSTT--------TSCCGGGS---C-TTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCCC--C--CCCEEEEECCCcC--------cCCChhHH---H-HHHHHHHhCCCEEEEe
Confidence 3445554 444566788897432 2 3489999943211 11111122 1 456889999999999
Q ss_pred CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc-CCccCCceEEEe
Q 007140 561 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVGLPILYLNTT 608 (616)
Q Consensus 561 n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~-~~vD~~ri~~~~ 608 (616)
||| |+.+.. .....+|+.++++||.+. ..++++||+|.+
T Consensus 119 d~r-~~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G 158 (303)
T 4e15_A 119 DYN-LCPQVT--------LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAG 158 (303)
T ss_dssp CCC-CTTTSC--------HHHHHHHHHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred cCC-CCCCCC--------hhHHHHHHHHHHHHHHHHhhhcCCCeEEEEe
Confidence 999 864431 235689999999999875 446789998876
No 258
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=97.58 E-value=0.00013 Score=75.55 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=66.3
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCC-CccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-NEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.++++. +|.+|.++++.|.+ . + |.|+||+.++. ++. ..+ .....+.|+++||+|+
T Consensus 167 ~~~~v~i~~-~g~~l~~~~~~P~~-~--~--~~P~vv~~hG~------------~~~~~~~---~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 167 IIKQLEIPF-EKGKITAHLHLTNT-D--K--PHPVVIVSAGL------------DSLQTDM---WRLFRDHLAKHDIAML 225 (415)
T ss_dssp EEEEEEEEC-SSSEEEEEEEESCS-S--S--CEEEEEEECCT------------TSCGGGG---HHHHHHTTGGGTCEEE
T ss_pred CeEEEEEEE-CCEEEEEEEEecCC-C--C--CCCEEEEECCC------------CccHHHH---HHHHHHHHHhCCCEEE
Confidence 677788876 89999999999986 2 2 34888888331 110 111 1133577889999999
Q ss_pred E-CCCCCccccCCCccC-ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~-~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
. |+| |. |....... .++ .....++++++.+.+.+|++||+|.+
T Consensus 226 ~~D~~-G~-G~s~~~~~~~~~----~~~~~~v~~~l~~~~~vd~~~i~l~G 270 (415)
T 3mve_A 226 TVDMP-SV-GYSSKYPLTEDY----SRLHQAVLNELFSIPYVDHHRVGLIG 270 (415)
T ss_dssp EECCT-TS-GGGTTSCCCSCT----THHHHHHHHHGGGCTTEEEEEEEEEE
T ss_pred EECCC-CC-CCCCCCCCCCCH----HHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 9 999 74 22221111 222 12235677788888889999999876
No 259
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0026 Score=71.19 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=39.0
Q ss_pred cccceEEccC--CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC--CcEEEEE
Q 007140 32 KINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~ 104 (616)
.+..+.|||+ |+.|+.... ...|.++++.+++...+...... ...+..+.|+|+ ++.|+..
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~----------Dg~I~vwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSY----------DGKVLIWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEET----------TSCEEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEE
T ss_pred ceEEEEecCCCCCCEEEEEeC----------CCeEEEEECCCCcccccccccCC--CCCeEEEEECCCCCCCEEEEE
Confidence 5788999998 888776653 24677778877753222211110 112668999999 8877764
No 260
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0082 Score=59.55 Aligned_cols=114 Identities=17% Similarity=0.210 Sum_probs=60.9
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-Cc-eEEEecCCCCCCCCCccccCccCCCCcceeecCC
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg 253 (616)
.+..++|||||++|+..+.+ ..+.+||+. ++ ..+.+..+... ......+.|+|++
T Consensus 109 ~V~~v~~sp~g~~las~s~D-------------~~v~iwd~~~~~~~~~~~~~~~~h----------~~~v~~v~~~p~~ 165 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRD-------------KSVWIWETDESGEEYECISVLQEH----------SQDVKHVIWHPSE 165 (330)
T ss_dssp CEEEEEECTTSCEEEEEETT-------------SCEEEEECCTTCCCCEEEEEECCC----------SSCEEEEEECSSS
T ss_pred cEEEEEECCCCCEEEEEeCC-------------CEEEEEeccCCCCCeEEEEEeccC----------CCceEEEEECCCC
Confidence 46789999999998877643 258889884 32 21222111100 0112358899998
Q ss_pred CceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc---eEeccccccccceeecCC--CceEEEeeeccCccEEEEE
Q 007140 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWL 328 (616)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~l~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~l~~ 328 (616)
.. |+-. . ....+.+|+. ..+.. ..+......+..+.|+|+ +..|+... .++..+||.
T Consensus 166 ~~-l~s~-s-----------~D~~i~iW~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~ 227 (330)
T 2hes_X 166 AL-LASS-S-----------YDDTVRIWKD---YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWK 227 (330)
T ss_dssp SE-EEEE-E-----------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEE
T ss_pred CE-EEEE-c-----------CCCeEEEEEC---CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEE
Confidence 73 3221 1 1223444553 22211 123333445667889998 44555543 235557776
Q ss_pred Ee
Q 007140 329 VC 330 (616)
Q Consensus 329 ~d 330 (616)
+.
T Consensus 228 ~~ 229 (330)
T 2hes_X 228 YM 229 (330)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 261
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0033 Score=62.74 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=75.6
Q ss_pred cccceEEcc--CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007140 32 KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (616)
Q Consensus 32 ~~~~~~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (616)
.+....|+| +|+.|+.... ...|.++|+.+++...+...... ..+..+.|+|||+.|+....
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~----------dg~i~~wd~~~~~~~~~~~~~~~---~~i~~~~~~pdg~~lasg~~--- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADN----------RGTIGFQSYEDDSQYIVHSAKSD---VEYSSGVLHKDSLLLALYSP--- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEET----------TCCEEEEESSSSCEEEEECCCSS---CCCCEEEECTTSCEEEEECT---
T ss_pred CEEEEEcCCCCCCCEEEEEeC----------CCcEEEEECCCCcEEEEEecCCC---CceEEEEECCCCCEEEEEcC---
Confidence 478899999 9998776542 35678889998887554322211 12568899999998766310
Q ss_pred CCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-e-eecCC--CCceeeeeECC
Q 007140 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-A-KDFGT--PAVYTAVEPSP 184 (616)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~-~~l~~--~~~~~~~~~Sp 184 (616)
...|.++|+ +++ . ..+.. ...+..++|||
T Consensus 191 ----------------------------------------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 191 ----------------------------------------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ----------------------------------------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ----------------------------------------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC
Confidence 135667777 553 3 34443 34677999999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
||++|+..... .|.+||+...
T Consensus 225 ~g~~l~s~~~~--------------~v~iwd~~~~ 245 (343)
T 3lrv_A 225 NGYWMVVECDQ--------------TVVCFDLRKD 245 (343)
T ss_dssp TSSEEEEEESS--------------BEEEEETTSS
T ss_pred CCCEEEEEeCC--------------eEEEEEcCCC
Confidence 99999888621 5889998754
No 262
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.56 E-value=0.0045 Score=61.03 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=35.6
Q ss_pred cccceEEcc--CCCeEEEEEeeccccccCCCceeEEEEECCCCceEe---cccCCCccccccccceEEecC--CcEEEEE
Q 007140 32 KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVNN--STLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~---lt~~~~~~~~~~~~~~~wspd--g~~l~~~ 104 (616)
.+....|+| +|+.|+-.+. + ..|.++++.+++... +..+.. .+..+.|+|+ +..|+..
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~--------D--~~v~iWd~~~~~~~~~~~~~~h~~-----~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSY--------D--RKVIIWREENGTWEKSHEHAGHDS-----SVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEET--------T--SCEEEECCSSSCCCEEEEECCCSS-----CCCEEEECCTTTCSCEEEE
T ss_pred cEEEEEeCCCCCCCEEEEEEC--------C--CEEEEEECCCCcceEEEEccCCCC-----ceEEEEECCCCCCcEEEEE
Confidence 477889986 4887765542 2 456777888764222 211221 2668999998 6655553
No 263
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.015 Score=56.41 Aligned_cols=110 Identities=8% Similarity=0.029 Sum_probs=65.3
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCCccccCccCCCCcceeecCC
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg 253 (616)
..+..++|+|+++ ++....+ ..+.+||+..+ ....+... ......+.|+|++
T Consensus 185 ~~i~~~~~~~~~~-~~~~~~d-------------g~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~ 237 (313)
T 3odt_A 185 DVVRHLAVVDDGH-FISCSND-------------GLIKLVDMHTGDVLRTYEGH-------------ESFVYCIKLLPNG 237 (313)
T ss_dssp SCEEEEEEEETTE-EEEEETT-------------SEEEEEETTTCCEEEEEECC-------------SSCEEEEEECTTS
T ss_pred ccEEEEEEcCCCe-EEEccCC-------------CeEEEEECCchhhhhhhhcC-------------CceEEEEEEecCC
Confidence 3567899999998 5554432 36889998754 44444321 0112358899998
Q ss_pred CceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-eccccccccceeecCCCceEEEeeeccCccEEEEEEeCC
Q 007140 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (616)
. |+.. .....+.+|+. ..++... +.........+.|+||+..++... ++ .|.++++.
T Consensus 238 ~--l~~~------------~~dg~v~iwd~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---dg--~i~iw~~~ 295 (313)
T 3odt_A 238 D--IVSC------------GEDRTVRIWSK---ENGSLKQVITLPAISIWSVDCMSNGDIIVGSS---DN--LVRIFSQE 295 (313)
T ss_dssp C--EEEE------------ETTSEEEEECT---TTCCEEEEEECSSSCEEEEEECTTSCEEEEET---TS--CEEEEESC
T ss_pred C--EEEE------------ecCCEEEEEEC---CCCceeEEEeccCceEEEEEEccCCCEEEEeC---CC--cEEEEeCC
Confidence 4 4322 12346777786 5444433 333444667899999998544322 23 46666666
Q ss_pred C
Q 007140 333 S 333 (616)
Q Consensus 333 ~ 333 (616)
+
T Consensus 296 ~ 296 (313)
T 3odt_A 296 K 296 (313)
T ss_dssp G
T ss_pred C
Confidence 5
No 264
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=97.49 E-value=5.6e-05 Score=80.64 Aligned_cols=109 Identities=16% Similarity=0.243 Sum_probs=64.7
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCcc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPII 567 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~ 567 (616)
+.|.+.+ .+|.|.+..+++ ++|+|||+|+|.+ ..|+...|.........+....|++|+. |||.|..
T Consensus 94 sedcl~l--~v~~P~~~~~~~--~~Pv~v~iHGGg~--------~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~ 161 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGTKAGA--NLPVMLWIFGGGF--------EIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASW 161 (534)
T ss_dssp CSCCCEE--EEEECTTCCTTC--CEEEEEEECCSTT--------TSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHH
T ss_pred CCCCeEE--EEEECCCCCCCC--CceEEEEEeCCCc--------ccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCC
Confidence 4466666 588998765444 3599999965432 2222222210000001122236899999 9996665
Q ss_pred ccCCCc--cCChhHHHHHHHHHHHHHHHHHc--CC-ccCCceEEEee
Q 007140 568 GEGDKL--PNDRFVEQLVSSAEAAVEEVVRR--GV-GLPILYLNTTA 609 (616)
Q Consensus 568 GyG~~f--~~~~~g~~~~~D~~~~v~~l~~~--~~-vD~~ri~~~~~ 609 (616)
||...- ....-+...+.|+.+|++|+.+. .+ .||+||.|-+.
T Consensus 162 gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~ 208 (534)
T 1llf_A 162 GFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGE 208 (534)
T ss_dssp HHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred CCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEE
Confidence 664311 00112345689999999999875 22 79999998763
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.49 E-value=0.076 Score=53.05 Aligned_cols=144 Identities=15% Similarity=0.119 Sum_probs=90.2
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.|+|.+++|.++- .....|++++++++..+.+....... ...+++.+.+..|+++-.
T Consensus 74 ~~~~l~~d~~~~~ly~~D---------~~~~~I~r~~~~g~~~~~~~~~~~~~----p~glavd~~~g~ly~~d~----- 135 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSD---------VTLDRILRANLNGSNVEEVVSTGLES----PGGLAVDWVHDKLYWTDS----- 135 (349)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCEEEECSSCSC----CCEEEEETTTTEEEEEET-----
T ss_pred ceEEEEEeccccEEEEEe---------ccCCceEEEecCCCCceEEEeCCCCC----ccEEEEecCCCeEEEEcC-----
Confidence 356778999888877753 23568999999887655543221111 346777777777777510
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~ 188 (616)
....|.+++++|. .+.+... ..-..+++.|++..
T Consensus 136 -------------------------------------------~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 136 -------------------------------------------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp -------------------------------------------TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred -------------------------------------------CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 1246778888763 3333322 23457899999889
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEE
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
|+++.... ...|++++.+|...+.+....+ .....+.++|++. .|||+
T Consensus 173 ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~------------~~PnGla~d~~~~-~lY~a 220 (349)
T 3v64_C 173 IYWTDWGN-----------TPRIEASSMDGSGRRIIADTHL------------FWPNGLTIDYAGR-RMYWV 220 (349)
T ss_dssp EEEEECSS-----------SCEEEEEETTSCSCEESCCSSC------------SCEEEEEEETTTT-EEEEE
T ss_pred EEEeccCC-----------CCEEEEEeCCCCCcEEEEECCC------------CCcceEEEeCCCC-EEEEE
Confidence 99886432 1479999999876666533111 0023578888776 48777
No 266
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0039 Score=66.39 Aligned_cols=140 Identities=11% Similarity=-0.001 Sum_probs=72.5
Q ss_pred CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-E-EEecCCCCCCCCCccccCccCCCCcc--eee
Q 007140 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-V-RELCDLPPAEDIPVCYNSVREGMRSI--SWR 250 (616)
Q Consensus 175 ~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~--~ws 250 (616)
..+..++|+|++ .|+..+.+ ..|.+||+..+. . ..+... ......+ .|+
T Consensus 267 ~~v~sv~~s~~~-~lasgs~D-------------gtV~lWD~~~~~~~~~~~~~H-------------~~~V~sv~~~~s 319 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFKN-------------GFVAEFDLTDPEVPSFYDQVH-------------DSYILSVSTAYS 319 (524)
T ss_dssp TCEEEEEESSSS-EEEEEETT-------------SEEEEEETTBCSSCSEEEECS-------------SSCEEEEEEECC
T ss_pred CCEEEEEecCCC-eEEEEeCC-------------CEEEEEECCCCCCceEEeecc-------------cccEEEEEEEcC
Confidence 356789999875 56655432 368899987432 1 112110 0112344 567
Q ss_pred cCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-eEeccc-c-ccccceeecCCCceEEEeeeccCccEEEE
Q 007140 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKL-D-LRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (616)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~ 327 (616)
|+|...|+-. .....+.+|+. ..++. ..+... . .....+.|+||+..|+.... ++ .+.
T Consensus 320 ~~g~~~laS~------------S~D~tvklWD~---~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~--d~--tv~ 380 (524)
T 2j04_B 320 DFEDTVVSTV------------AVDGYFYIFNP---KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG--AS--SLR 380 (524)
T ss_dssp TTSCCEEEEE------------ETTSEEEEECG---GGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS--SS--EEE
T ss_pred CCCCeEEEEe------------ccCCeEEEEEC---CCCCcccccccccccCcccceEeCCCcCeEEEeCC--CC--cEE
Confidence 8773222221 12235566665 32221 112111 1 23457899999987766442 12 466
Q ss_pred EEeCCCCCCCceEEeec--ccccccCCCCCCCeeeCCCCCEEEEE
Q 007140 328 LVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAK 370 (616)
Q Consensus 328 ~~d~~~~~~~~~~l~~~--~~~~~~~~~g~~~~~~s~dgk~l~~~ 370 (616)
+.|+..+. ....+... .+.. ++|+|+|+.|+..
T Consensus 381 lwd~~~~~-~~~~l~gH~~~V~s---------va~Sp~g~~l~Sg 415 (524)
T 2j04_B 381 AVPSRAAF-AVHPLVSRETTITA---------IGVSRLHPMVLAG 415 (524)
T ss_dssp EEETTCTT-CCEEEEECSSCEEE---------EECCSSCCBCEEE
T ss_pred EEECcccc-cceeeecCCCceEE---------EEeCCCCCeEEEE
Confidence 66776631 22333322 1222 8899999976544
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.47 E-value=0.084 Score=51.90 Aligned_cols=144 Identities=12% Similarity=0.081 Sum_probs=85.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCC----CceEecccCCCccccccccceEEecCCcEEEEEecC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----GEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~----g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~ 107 (616)
....+.|++++++|.++- .....|+++++++ .....+....- .....+++.+.++.|+++-.
T Consensus 31 ~p~g~~~d~~~~~ly~~D---------~~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p~glavd~~~~~ly~~d~- 96 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISRDI----QAPDGLAVDWIHSNIYWTDS- 96 (316)
T ss_dssp SEEEEEEETTTTEEEEEE---------TTTTEEEEEEC--------CEEEECSSC----SCCCEEEEETTTTEEEEEET-
T ss_pred ceEEEEEEeCCCEEEEEE---------CCCCcEEEEECCCCCCCcccEEEEeCCC----CCcCEEEEeecCCeEEEEEC-
Confidence 467889999999877763 2357899999886 23233321110 01346677766676766410
Q ss_pred CCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECC
Q 007140 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSP 184 (616)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~Sp 184 (616)
...+|.+++++|+ .+.+... ..-..+++.|
T Consensus 97 -----------------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 97 -----------------------------------------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp -----------------------------------------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------------------------------------------CCCEEEEEeCCCCceEEEEECCCCCcceEEeCC
Confidence 1246777788663 3333321 2345789999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEE
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
++.+|+++.... ...|++++.+|...+.+....+ .....+.+++++. .|||+
T Consensus 130 ~~g~ly~~d~~~-----------~~~I~~~~~dG~~~~~~~~~~~------------~~P~gla~d~~~~-~lY~~ 181 (316)
T 1ijq_A 130 VHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI------------QWPNGITLDLLSG-RLYWV 181 (316)
T ss_dssp TTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSC------------SCEEEEEEETTTT-EEEEE
T ss_pred CCCEEEEEccCC-----------CCeEEEEcCCCCCeEEEEECCC------------CCceEEEEeccCC-EEEEE
Confidence 888888885431 1378999998876665533111 0123578898876 48776
No 268
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=97.46 E-value=0.00012 Score=71.15 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=45.4
Q ss_pred ceeEEEEEC-CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~-~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.+++.+ .+|.++...||+|+++++++++ |+||+.|+.. +....|.... ...++++++||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--P~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESNKV--PVLYWLSGLT-----------CTDENFMQKA-GAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTBCE--EEEEEECCTT-----------CCSHHHHHHS-CCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCCCc--CEEEEeCCCC-----------CChhhhhcch-hHHHHHhhCCeEEE
Confidence 455566654 5789999999999999876655 8888884320 0001221101 23578889999999
Q ss_pred E-CCC
Q 007140 560 A-GPS 563 (616)
Q Consensus 560 ~-n~R 563 (616)
. |.+
T Consensus 80 ~~d~~ 84 (280)
T 3ls2_A 80 APDTS 84 (280)
T ss_dssp ECCSS
T ss_pred EeCCc
Confidence 9 843
No 269
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.0099 Score=61.33 Aligned_cols=51 Identities=2% Similarity=0.123 Sum_probs=35.4
Q ss_pred ceEEEEeC-CCC-eeecCC---CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce
Q 007140 157 AQLVLGSL-DGT-AKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (616)
Q Consensus 157 ~~l~~~d~-~g~-~~~l~~---~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (616)
..|.++|+ +++ ...+.. ...+..++|+|+++.|+....+ ..|.+||+..++
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~ 247 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------------GIIDIWDIRFNV 247 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------------SCEEEEETTTTE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEEcCCcc
Confidence 46777888 554 333433 2356789999999998877643 268899987554
No 270
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.45 E-value=0.0096 Score=63.01 Aligned_cols=121 Identities=12% Similarity=0.063 Sum_probs=71.6
Q ss_pred ccceEEcc-----CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEE-e-cCCcEEEEEe
Q 007140 33 INFVSWSP-----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-V-NNSTLLIFTI 105 (616)
Q Consensus 33 ~~~~~~SP-----DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pdg~~l~~~~ 105 (616)
...|..|. ||+++ |+.. ..+..|.++|+++.+..+++..+.+. ....+.+ + ||+++|+...
T Consensus 87 ~hh~~~s~t~g~~DG~~l-fVnd--------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFL-FMND--------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp BCCEEEEEETTEEEEEEE-EEEE--------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCccccCCCCCCcCCCEE-EEEc--------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 45689998 99974 5443 34678999999999877766444321 1346666 5 9999986642
Q ss_pred cCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCCCCceeeeeEC
Q 007140 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPS 183 (616)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~~~~~~~~~~S 183 (616)
....+. ..+|+. ..+ .++ ....+-++|. +.+ ..++.-++....++.|
T Consensus 155 ~~~~p~---------------~~dg~~-----l~~-----~~~------~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 EDETPL---------------VNDGTN-----MED-----VAN------YVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CSCEES---------------SCSSSS-----TTC-----GGG------EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred cccccc---------------CCCCcc-----ccc-----ccc------cCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 211000 011211 000 011 1356778888 444 3444322234568899
Q ss_pred CCCcEEEEEeccC
Q 007140 184 PDQKYVLITSMHR 196 (616)
Q Consensus 184 pDg~~i~~~~~~~ 196 (616)
|||+++++++.+.
T Consensus 204 pdGk~~~vt~~~s 216 (595)
T 1fwx_A 204 YEGKWAFSTSYNS 216 (595)
T ss_dssp SSSSEEEEEESCT
T ss_pred CCCCEEEEEecCc
Confidence 9999999887553
No 271
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.42 E-value=0.028 Score=54.80 Aligned_cols=230 Identities=10% Similarity=0.102 Sum_probs=115.6
Q ss_pred CCCceeeecCC----CCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEec-ccCCCccccccccce
Q 007140 18 LGPEKEVHGYP----DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-FESPDICLNAVFGSF 92 (616)
Q Consensus 18 ~g~~~~lt~~~----~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~l-t~~~~~~~~~~~~~~ 92 (616)
+++.+.+. .+ .......+.++||+.+|.+... ...|++++.+ |+.+.+ ..............+
T Consensus 55 ~g~~~~~~-~~~~~~~~~~~~~i~~~~~~g~l~v~~~----------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i 122 (314)
T 1pjx_A 55 TGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVADM----------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC 122 (314)
T ss_dssp TCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEET----------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEE
T ss_pred CCcEEEEE-ecccCCCCCCCceEEEecCCCcEEEEEC----------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCE
Confidence 46666554 21 1113567889999334444331 2379999998 877666 432111101124578
Q ss_pred EEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCeeecC
Q 007140 93 VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFG 172 (616)
Q Consensus 93 ~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~~~l~ 172 (616)
.++++|+. ++......... ..+.. . .. .....|++++.+++...+.
T Consensus 123 ~~d~~g~l-~v~~~~~~~~~-----------------------~~~~~---~-~~------~~~~~l~~~~~~g~~~~~~ 168 (314)
T 1pjx_A 123 AFDYEGNL-WITAPAGEVAP-----------------------ADYTR---S-MQ------EKFGSIYCFTTDGQMIQVD 168 (314)
T ss_dssp EECTTSCE-EEEECBCBCTT-----------------------SCCCB---T-TS------SSCEEEEEECTTSCEEEEE
T ss_pred EECCCCCE-EEEecCccccc-----------------------ccccc---c-cc------CCCCeEEEECCCCCEEEec
Confidence 89999974 34321100000 00000 0 00 0235788888776655432
Q ss_pred CC-CceeeeeEC----CCCcEEEEEeccCCCcccccCcccCccEEEEeCC-CceE---EEecCCCCCCCCCccccCccCC
Q 007140 173 TP-AVYTAVEPS----PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLV---RELCDLPPAEDIPVCYNSVREG 243 (616)
Q Consensus 173 ~~-~~~~~~~~S----pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~---~~l~~~~~~~~~~~~~~~~~~~ 243 (616)
.. .....++|+ |||+.|++.... ...|++++.+ .++. +.+..++... ...
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~---------~~~ 227 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGTH---------EGG 227 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCCS---------SCE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCccccceEEEECCCCC---------CCC
Confidence 21 223578899 999988877532 2368888865 3332 1222211100 001
Q ss_pred CCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCc-eEeccccccccceeecCCCceEEEeeeccCc
Q 007140 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (616)
Q Consensus 244 ~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (616)
...+.++++|. |+.... ..+.++.++. .+++. ..+.........+.+++||..|+.....
T Consensus 228 p~~i~~d~~G~--l~v~~~-----------~~~~i~~~d~---~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~--- 288 (314)
T 1pjx_A 228 ADGMDFDEDNN--LLVANW-----------GSSHIEVFGP---DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE--- 288 (314)
T ss_dssp EEEEEEBTTCC--EEEEEE-----------TTTEEEEECT---TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---
T ss_pred CCceEECCCCC--EEEEEc-----------CCCEEEEEcC---CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---
Confidence 12467788875 433311 1234566665 42333 2232222345667889998854433221
Q ss_pred cEEEEEEeCCC
Q 007140 323 QTRTWLVCPGS 333 (616)
Q Consensus 323 ~~~l~~~d~~~ 333 (616)
...|++++++.
T Consensus 289 ~~~l~~~~~~~ 299 (314)
T 1pjx_A 289 NNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEEECSS
T ss_pred CCeEEEEeCCC
Confidence 12688888765
No 272
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.40 E-value=0.044 Score=56.00 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=35.4
Q ss_pred ceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcccccccc-ceEEecCCcEEEE
Q 007140 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFG-SFVWVNNSTLLIF 103 (616)
Q Consensus 35 ~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~-~~~wspdg~~l~~ 103 (616)
....+||| +|++..+..++ ++...|.++|.++++...--..... ...+. .+.|+|+++.++.
T Consensus 142 ~~~~~pdG---i~Vs~~g~~~g--~~~g~v~vlD~~T~~v~~~~~~~~~--~~~~~Yd~~~~p~~~~mvs 204 (462)
T 2ece_A 142 TVHCGPDA---IYISALGNEEG--EGPGGILMLDHYSFEPLGKWEIDRG--DQYLAYDFWWNLPNEVLVS 204 (462)
T ss_dssp EEEECSSC---EEEEEEEETTS--CSCCEEEEECTTTCCEEEECCSBCT--TCCCCCCEEEETTTTEEEE
T ss_pred ceeECCCe---EEEEcCCCcCC--CCCCeEEEEECCCCeEEEEEccCCC--CccccceEEECCCCCEEEE
Confidence 34789999 33333321112 4567899999998875432221111 01122 5788999995544
No 273
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=97.38 E-value=0.00017 Score=77.90 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=56.5
Q ss_pred EEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh-CCeEEEE-CCCCCccccCCC----
Q 007140 499 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA-GPSIPIIGEGDK---- 572 (616)
Q Consensus 499 l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~-~Gy~Vl~-n~R~GS~GyG~~---- 572 (616)
+|+|.+.. + ++|||||+|+|.+. .++.... . ...+.|++ .|++|+. |||.|.-||...
T Consensus 131 ~y~p~~~~--~--~~PV~v~iHGGg~~--------~g~~~~~---~-~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~ 194 (585)
T 1dx4_A 131 NGNPQNTT--N--GLPILIWIYGGGFM--------TGSATLD---I-YNADIMAAVGNVIVASFQYRVGAFGFLHLAPEM 194 (585)
T ss_dssp ------CC--S--SEEEEEEECCSTTT--------CCCTTCG---G-GCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGS
T ss_pred cccccccC--C--CCCEEEEECCCccc--------CCCCCCC---C-CCchhhhccCCEEEEEecccccchhhccccccc
Confidence 45564322 2 45999999654322 2221111 1 12355665 7999999 999998888653
Q ss_pred ---ccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 573 ---LPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 573 ---f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
.....-|...+.|+.+|++|+.+.- -.||+||.|.+
T Consensus 195 ~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~vti~G 236 (585)
T 1dx4_A 195 PSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFG 236 (585)
T ss_dssp CGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEE
T ss_pred ccccCCCCCCcccHHHHHHHHHHHHHHHHHhCCCcceeEEee
Confidence 1111112335899999999998862 26999999876
No 274
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=97.38 E-value=0.00012 Score=78.30 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=63.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh------CCeEEEE-C
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLA-G 561 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~------~Gy~Vl~-n 561 (616)
+.|.+.+ .+|.|.+..+++ ++|+|||+|+|.+. .++...|. ...|+. .|++|+. |
T Consensus 102 sedcl~l--~v~~P~~~~~~~--~~Pviv~iHGGg~~--------~g~~~~~~------~~~l~~~~l~~~~~~vvv~~n 163 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPDA--KLPVMVWIYGGAFV--------YGSSAAYP------GNSYVKESINMGQPVVFVSIN 163 (544)
T ss_dssp CSCCCEE--EEEEETTCCTTC--CEEEEEEECCCTTC--------CSGGGGCC------SHHHHHHHHHTTCCCEEEEEC
T ss_pred CCCCeEE--EEEeCCCCCCCC--CCcEEEEECCCccc--------cCCccccC------chHHHHHHhhcCCCEEEEeCC
Confidence 4566666 478898765444 35999999654322 22211221 122333 4899999 9
Q ss_pred CCCCccccCCCcc--CChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEee
Q 007140 562 PSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTTA 609 (616)
Q Consensus 562 ~R~GS~GyG~~f~--~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~~ 609 (616)
||.|..||...-. ...-+...+.|+.+|++|+.+.- -+||+||.|-+-
T Consensus 164 YRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~ 216 (544)
T 1thg_A 164 YRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGE 216 (544)
T ss_dssp CCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred CCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEE
Confidence 9955445432100 01123456999999999998761 379999999763
No 275
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.38 E-value=0.089 Score=49.80 Aligned_cols=193 Identities=11% Similarity=-0.034 Sum_probs=102.1
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.++|||+ |. +.. . ...|++++.+++....+..... .....+.++++|+ |++...
T Consensus 68 ~p~~i~~~~~g~-l~-v~~--------~-~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~----- 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VY-VTD--------F-NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGA-VYVADR----- 126 (270)
T ss_dssp SCCCEEECTTCC-EE-EEE--------T-TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCC-EEEEEG-----
T ss_pred CcceeEECCCCC-EE-EEc--------C-CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCCC-EEEEEC-----
Confidence 466789999998 44 332 2 4689999988766554421110 1134677888887 444210
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCC-CeeecCCC--CceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~--~~~~~~~~SpDg~~ 188 (616)
....|++++... ........ .....++++|+|+
T Consensus 127 -------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~- 162 (270)
T 1rwi_B 127 -------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN- 162 (270)
T ss_dssp -------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-
T ss_pred -------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-
Confidence 113455555422 22222111 1345789999997
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|+++... ...|++++..++.......... .....+.+.++|. |+....
T Consensus 163 l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g~--l~v~~~------ 210 (270)
T 1rwi_B 163 VYVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAGT--VYVTEH------ 210 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTCC--EEEEET------
T ss_pred EEEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCCC--EEEEEC------
Confidence 6665432 2368899988765443221100 1123467788874 544321
Q ss_pred ccccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
..+.++.++. .+.....+.... .....+.+++||..++.+. . ..+|.++++..
T Consensus 211 -----~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~---~~~v~~~~~~~ 264 (270)
T 1rwi_B 211 -----NTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR-G---NDRVVKLTSLE 264 (270)
T ss_dssp -----TTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCCEEEEEG-G---GTEEEEECCCG
T ss_pred -----CCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCCEEEEEC-C---CCEEEEEcCCC
Confidence 1234555565 433333222111 2345678889987544443 2 22688887764
No 276
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=97.38 E-value=0.00079 Score=67.13 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=66.5
Q ss_pred CceeEE-EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEE
Q 007140 480 LQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 480 ~~~e~i-~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~V 558 (616)
+..+.+ .+...||.+|.++++.|.+- +.|+||++++.. ++...| . ...+.|+++||.|
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~~------~~p~vv~~HG~~-----------~~~~~~---~-~~~~~l~~~g~~v 90 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTGT------PKALIFVSHGAG-----------EHSGRY---E-ELARMLMGLDLLV 90 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSSC------CSEEEEEECCTT-----------CCGGGG---H-HHHHHHHTTTEEE
T ss_pred cccccCceEEccCCeEEEEEEeCCCCC------CCcEEEEECCCC-----------cccchH---H-HHHHHHHhCCCeE
Confidence 333344 78889999999999998641 237888873210 000122 1 4467899999999
Q ss_pred EE-CCCCCccccCCCccC----ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~----~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+. |+| | +|..-.. .. -....+|+.+.+++|..+ .+.++|.+-+
T Consensus 91 i~~D~~-G---~G~S~~~~~~~~~-~~~~~~d~~~~l~~l~~~--~~~~~v~l~G 138 (342)
T 3hju_A 91 FAHDHV-G---HGQSEGERMVVSD-FHVFVRDVLQHVDSMQKD--YPGLPVFLLG 138 (342)
T ss_dssp EEECCT-T---STTSCSSTTCCSC-THHHHHHHHHHHHHHHHH--STTCCEEEEE
T ss_pred EEEcCC-C---CcCCCCcCCCcCc-HHHHHHHHHHHHHHHHHh--CCCCcEEEEE
Confidence 99 999 7 4443221 12 234579999999999876 4566776654
No 277
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=97.37 E-value=0.00094 Score=63.72 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=65.5
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-C
Q 007140 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-G 561 (616)
Q Consensus 483 e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n 561 (616)
...++.+.||.+|++.++.|.+- + +.|+||++|++.. ..++...| .....++|+++ |.|+. |
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~~---~--~~~~vv~~HG~~~--------~~~~~~~~---~~~~~~~l~~~-~~v~~~d 66 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKNQ---P--TKGVIVYIHGGGL--------MFGKANDL---SPQYIDILTEH-YDLIQLS 66 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSSS---S--CSEEEEEECCSTT--------TSCCTTCS---CHHHHHHHTTT-EEEEEEC
T ss_pred eEEEEecCCcEEEEEEEEccCCC---C--CCCEEEEEECCcc--------cCCchhhh---HHHHHHHHHhC-ceEEeec
Confidence 45678889999999999999742 1 2388888843210 01111112 11345667776 99999 9
Q ss_pred CCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 562 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 562 ~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+| |+... . .....+|+.++++++.++ ++.++|.+-+
T Consensus 67 ~~-~~~~~-------~-~~~~~~d~~~~~~~l~~~--~~~~~i~l~G 102 (275)
T 3h04_A 67 YR-LLPEV-------S-LDCIIEDVYASFDAIQSQ--YSNCPIFTFG 102 (275)
T ss_dssp CC-CTTTS-------C-HHHHHHHHHHHHHHHHHT--TTTSCEEEEE
T ss_pred cc-cCCcc-------c-cchhHHHHHHHHHHHHhh--CCCCCEEEEE
Confidence 99 75321 1 235689999999999987 6778887765
No 278
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.36 E-value=0.051 Score=52.22 Aligned_cols=134 Identities=9% Similarity=0.111 Sum_probs=72.1
Q ss_pred ceEEEEeCCCC-eeecCCC--CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCC
Q 007140 157 AQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (616)
..|++++.+|+ .+.+... .....++++|+|+ |+++... ...|++++.+++....+.... .
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~---~- 162 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECK------------VMRVIIFDQNGNVLHKFGCSK---H- 162 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETT------------TTEEEEECTTSCEEEEEECTT---T-
T ss_pred CEEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECC------------CCEEEEEcCCCCEEEEeCCCC---c-
Confidence 35666776664 3333322 2346789999997 5555332 236889998776655543210 0
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc--ccccceeecCCCc
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSL 311 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~--~~~~~~~wspDg~ 311 (616)
......+.++++|. |+.... ..+.+++++. ++.....+.... .....+.+++||.
T Consensus 163 -------~~~p~~i~~~~~g~--l~v~~~-----------~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 163 -------LEFPNGVVVNDKQE--IFISDN-----------RAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGE 219 (286)
T ss_dssp -------CSSEEEEEECSSSE--EEEEEG-----------GGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred -------cCCcEEEEECCCCC--EEEEEC-----------CCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCC
Confidence 01123577888875 544311 1234566665 432222332211 2345678899997
Q ss_pred eEEEeeeccCccEEEEEEeCCC
Q 007140 312 ALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.++.... . ...|.+++.++
T Consensus 220 l~v~~~~-~--~~~i~~~~~~g 238 (286)
T 1q7f_A 220 ILIADNH-N--NFNLTIFTQDG 238 (286)
T ss_dssp EEEEECS-S--SCEEEEECTTS
T ss_pred EEEEeCC-C--CEEEEEECCCC
Confidence 6665531 1 12688888764
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.36 E-value=0.16 Score=51.75 Aligned_cols=185 Identities=11% Similarity=-0.037 Sum_probs=105.6
Q ss_pred eeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccccc
Q 007140 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (616)
Q Consensus 62 ~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (616)
..|..+++++++...+..... ....+.|.+.++.|+++-.
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~-----~~~~l~~d~~~~~lywsD~----------------------------------- 131 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL----------------------------------- 131 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCS-----CEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred ceeEEEccCCcceeEeccccC-----cceEEeeeeccCceEEEec-----------------------------------
Confidence 689999998876555532211 1457889988888887511
Q ss_pred ccCCCcccceeEeccceEEEEeCCC-----CeeecCC-C-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEE
Q 007140 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (616)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~d~~g-----~~~~l~~-~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (616)
....|++++++| ....+.. . .....+++.+.++.|+++... ...|+++
T Consensus 132 -------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~~ 186 (400)
T 3p5b_L 132 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 186 (400)
T ss_dssp -------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred -------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEEE
Confidence 123566666643 1222222 1 233577888878888888543 2378899
Q ss_pred eCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEe
Q 007140 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (616)
Q Consensus 215 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l 294 (616)
+++++..+.+....+. ..+.+...|.+. .|||.... ....++.++. ++...+.+
T Consensus 187 ~~~g~~~~~l~~~~~~------------~P~~iavdp~~g-~ly~td~~----------~~~~I~~~~~---dG~~~~~~ 240 (400)
T 3p5b_L 187 DTKGVKRKTLFRENGS------------KPRAIVVDPVHG-FMYWTDWG----------TPAKIKKGGL---NGVDIYSL 240 (400)
T ss_dssp CTTTCSEEEEEECSSC------------CEEEEEEETTTT-EEEEEECS----------SSCCEEEEET---TSCSCEEE
T ss_pred eCCCCceEEEEeCCCC------------CcceEEEecccC-eEEEEeCC----------CCCEEEEEeC---CCCccEEE
Confidence 9998866555431110 123466666554 47776321 1134555565 54444444
Q ss_pred cccc-ccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEe
Q 007140 295 HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (616)
Q Consensus 295 ~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (616)
.... .....+++++++..|++.+.. ..+|+.+++++. ..+.+.
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~---~~~I~~~d~dG~--~~~~~~ 284 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDVNGG--NRKTIL 284 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTSC--CCEEEE
T ss_pred EECCCCceEEEEEEeCCCEEEEEECC---CCEEEEEeCCCC--ccEEEE
Confidence 3322 334568899887766554422 238999999873 344443
No 280
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.35 E-value=0.0076 Score=61.50 Aligned_cols=58 Identities=9% Similarity=-0.101 Sum_probs=37.3
Q ss_pred cccceEEcc--------CCCeEEEEEeeccccccCCCceeEEEEECCCCce-EecccCCCccccccccceEEecCCcEEE
Q 007140 32 KINFVSWSP--------DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLI 102 (616)
Q Consensus 32 ~~~~~~~SP--------DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~ 102 (616)
.+..+.||| ||+.||-.+. + ..|.+||+.++.. ..+..... . +....|+|++..++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~--------D--~tv~~Wd~~~~~~~~~~~~~~~-~----v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGD--------D--CTLIIWRLTDEGPILAGYPLSS-P----GISVQFRPSNPNQL 202 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEET--------T--SEEEEEEEETTEEEEEEEECSS-C----EEEEEEETTEEEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEEC--------C--CeEEEEECCCCceeeeecCCCC-C----cEEEEECCCCCceE
Confidence 478899998 8988887653 2 4566668766543 33332222 1 45789999987544
Q ss_pred EE
Q 007140 103 FT 104 (616)
Q Consensus 103 ~~ 104 (616)
.+
T Consensus 203 ~~ 204 (393)
T 4gq1_A 203 IV 204 (393)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 281
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=97.32 E-value=0.00011 Score=79.23 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=63.8
Q ss_pred CCCCcEEEEEEEcCCCCCCC-CCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC-CeEEEE-CCCCC
Q 007140 489 RKDGVPLTATLYLPPGYDQS-KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLA-GPSIP 565 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~-kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~-Gy~Vl~-n~R~G 565 (616)
+-|.+.+ .+|.|.+.... ...++|+|||+|+|.+ ..|+...| . ...||++ |++|+. |||.|
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~~~Pv~v~iHGGg~--------~~g~~~~~---~---~~~la~~~~~vvv~~~YRl~ 171 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGGPKPVMVYIHGGSY--------MEGTGNLY---D---GSVLASYGNVIVITVNYRLG 171 (574)
T ss_dssp CSCCCEE--EEEEEC--------CCEEEEEECCCSSS--------SSCCGGGS---C---CHHHHHHHTCEEEEECCCCH
T ss_pred CCcCCEE--EEEECCCCCcCCCCCCCcEEEEECCCcc--------cCCCCCcc---C---chhhhccCCEEEEEeCCcCc
Confidence 3455555 58889765311 0124699999965432 22222222 1 2457776 599999 99987
Q ss_pred ccccCCCccCChhHHHHHHHHHHHHHHHHHc--CC-ccCCceEEEe
Q 007140 566 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--GV-GLPILYLNTT 608 (616)
Q Consensus 566 S~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~--~~-vD~~ri~~~~ 608 (616)
.-||...-....-+...+.|+.+|++|+.+. .+ .||+||.|.+
T Consensus 172 ~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G 217 (574)
T 3bix_A 172 VLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFG 217 (574)
T ss_dssp HHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEE
T ss_pred ccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEe
Confidence 7777543221111234589999999999876 22 7999999876
No 282
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.015 Score=66.33 Aligned_cols=127 Identities=7% Similarity=0.040 Sum_probs=68.3
Q ss_pred eEEEEeCCC-Cee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCCCC
Q 007140 158 QLVLGSLDG-TAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIP 234 (616)
Q Consensus 158 ~l~~~d~~g-~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~ 234 (616)
.|.+++..+ +.. .+.....+..++||| |++|+....+ ..|.+||+.++ ....+.. +
T Consensus 40 ~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D-------------~~v~lWd~~~~~~~~~~~~-~------ 98 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAK-------------DTVYVLSLYSQKVLTTVFV-P------ 98 (902)
T ss_dssp EEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETT-------------CEEEEEETTTCSEEEEEEC-S------
T ss_pred EEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECc-------------CeEEEEECCCCcEEEEEcC-C------
Confidence 345555532 222 233333567899999 8877666432 36889998754 3333321 0
Q ss_pred ccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE------------ecccccccc
Q 007140 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI------------LHKLDLRFR 302 (616)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------------l~~~~~~~~ 302 (616)
.....+.|+|+++. | ++.. ....+.+|+. .+++... +......+.
T Consensus 99 -------~~V~~v~~sp~g~~-l-~sgs-----------~dg~V~lwd~---~~~~~~~~~i~~~~~~~~~~~~h~~~V~ 155 (902)
T 2oaj_A 99 -------GKITSIDTDASLDW-M-LIGL-----------QNGSMIVYDI---DRDQLSSFKLDNLQKSSFFPAARLSPIV 155 (902)
T ss_dssp -------SCEEEEECCTTCSE-E-EEEE-----------TTSCEEEEET---TTTEEEEEEECCHHHHHTCSSSCCCCCC
T ss_pred -------CCEEEEEECCCCCE-E-EEEc-----------CCCcEEEEEC---CCCccccceeccccccccccccCCCCeE
Confidence 01235889999973 3 2211 1234566676 4333211 111224567
Q ss_pred ceeecCCCc-eEEEeeeccCccEEEEEEeCCC
Q 007140 303 SVSWCDDSL-ALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 303 ~~~wspDg~-~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
.+.|+|++. .++... . ++ .+ +.|+.+
T Consensus 156 sl~~sp~~~~~l~~g~-~-dg--~v-lWd~~~ 182 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISY-E-YV--TL-TYSLVE 182 (902)
T ss_dssp EEEEETTEEEEEEEEC-S-SC--EE-EEETTT
T ss_pred EEEEccCCCCEEEEEe-C-CC--cE-EEECCC
Confidence 789999753 444432 2 23 46 778876
No 283
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.30 E-value=0.037 Score=52.75 Aligned_cols=197 Identities=9% Similarity=-0.001 Sum_probs=106.6
Q ss_pred ccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007140 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (616)
...+.|+||| + +|.++.. .+...|.++|+++|+..+-...+.. ......+.+|++|+.+..
T Consensus 23 ~~Gl~~~~dg-~-Lyvstg~------~~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~g~~lyv~t~------ 83 (266)
T 2iwa_A 23 TQGLVYAEND-T-LFESTGL------YGRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLLNEKLYQVVW------ 83 (266)
T ss_dssp EEEEEECSTT-E-EEEEECS------TTTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEET------
T ss_pred cccEEEeCCC-e-EEEECCC------CCCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEeCCEEEEEEe------
Confidence 4688999996 4 5655421 3468999999999986544322221 111223344666666411
Q ss_pred CCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCCCCceeeeeECCCCcEEE
Q 007140 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVL 190 (616)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~~~~~~~~~~SpDg~~i~ 190 (616)
....++++|. +.+ ...+..+ .-....+++||++++
T Consensus 84 ------------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~ 120 (266)
T 2iwa_A 84 ------------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILY 120 (266)
T ss_dssp ------------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEE
T ss_pred ------------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEE
Confidence 1357888888 553 3445332 112355788999988
Q ss_pred EEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcc
Q 007140 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (616)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (616)
++ +. ...|+++|.++.+ .+.+.--. . ..|. .....+.|. ||. | |+..
T Consensus 121 vs-~g------------s~~l~viD~~t~~v~~~I~Vg~-~-~~p~------~~~nele~~-dg~--l-yvn~------- 168 (266)
T 2iwa_A 121 GS-DG------------TSILYEIDPHTFKLIKKHNVKY-N-GHRV------IRLNELEYI-NGE--V-WANI------- 168 (266)
T ss_dssp EE-CS------------SSEEEEECTTTCCEEEEEECEE-T-TEEC------CCEEEEEEE-TTE--E-EEEE-------
T ss_pred EE-CC------------CCeEEEEECCCCcEEEEEEECC-C-Cccc------ccceeEEEE-CCE--E-EEec-------
Confidence 76 32 2379999987643 34332100 0 0000 001124455 542 4 3422
Q ss_pred cccCCCceeEeccCCCCCCCCceEecccc--------------ccccceeecCCCce-EEEeeeccCccEEEEEEeCCC
Q 007140 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLD--------------LRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~--------------~~~~~~~wspDg~~-l~~~~~~~~~~~~l~~~d~~~ 333 (616)
...+.+.++|. ++++........ .....++|+||+.. |+... ...+|+.+++..
T Consensus 169 ---~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk----~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 ---WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK----LWPKLFEIKLHL 237 (266)
T ss_dssp ---TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET----TCSEEEEEEEEE
T ss_pred ---CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC----CCCeEEEEEEec
Confidence 12346666676 556654422211 12356889999875 44443 233788888865
No 284
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.30 E-value=0.0099 Score=62.91 Aligned_cols=179 Identities=12% Similarity=0.048 Sum_probs=92.0
Q ss_pred eEEeecCCCCCCCCceeeecCCCCCcccceEE-c-cCCCeEEEEEeecc----ccc-----cCCCceeEEEEECCCCce-
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSW-S-PDGKRIAFSVRVDE----EDN-----VSSCKLRVWIADAETGEA- 74 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~-S-PDG~~iaf~~~~~~----~~~-----~~~~~~~l~v~~~~~g~~- 74 (616)
|...+++. .+...+..+|.+......++ + |||++| |+..+.. .++ .....+.+-++|.++.+.
T Consensus 114 VavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v-~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 114 VARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYV-FCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp EEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEE-EEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred EEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEE-EEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 44455543 66566556776656667777 6 999997 5553210 000 113456789999998763
Q ss_pred EecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEe
Q 007140 75 KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (616)
Q Consensus 75 ~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~ 154 (616)
.+|- ... .......||||++++.+............+. ..........+ ........+ +.. +.+
T Consensus 189 ~qI~-Vgg-----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~--~~~~d~v~V~~---~~~~~~~v~---~Gk-~~~- 252 (595)
T 1fwx_A 189 WQVL-VSG-----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMT--AAEMDHIVVFN---IAEIEKAIA---AGD-YQE- 252 (595)
T ss_dssp EEEE-ESS-----CCCCEEECSSSSEEEEEESCTTCCSSHHHHT--CCSEEEEEEEE---HHHHHHHHH---HTC-SEE-
T ss_pred EEEE-eCC-----CccceEECCCCCEEEEEecCcccCcchhhcc--ccccceEEEee---ccceeEecc---CCC-eeE-
Confidence 2331 111 1457789999999888654322110000000 00000000000 000000000 111 111
Q ss_pred ccceEEEEeC-C--CC--eeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 155 TTAQLVLGSL-D--GT--AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 155 ~~~~l~~~d~-~--g~--~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
...+.++|. + ++ +..+..+..-..+.+||||++++++... ...+.++|++..
T Consensus 253 -i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~ 309 (595)
T 1fwx_A 253 -LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRF 309 (595)
T ss_dssp -ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGH
T ss_pred -ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECccc
Confidence 145888998 4 42 2344433334578999999999988533 347888888743
No 285
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=97.29 E-value=0.00014 Score=70.68 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=33.0
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecc
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAY 520 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~ 520 (616)
..+.+++++. +|.++..+||+|++++++++| |+|++.+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--Pvl~~lh 55 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGY--PVIYVLD 55 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCE--EEEEEES
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCc--cEEEEec
Confidence 7888999987 789999999999999887766 8888883
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.29 E-value=0.16 Score=51.84 Aligned_cols=169 Identities=8% Similarity=0.018 Sum_probs=91.4
Q ss_pred ccceEEEEeCCC-CeeecCC-CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc----eEEEecCCC
Q 007140 155 TTAQLVLGSLDG-TAKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLP 228 (616)
Q Consensus 155 ~~~~l~~~d~~g-~~~~l~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~ 228 (616)
....|.++++++ +...+.. ......++|++....|+++.... ..|+++++++. ....+....
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~------------~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC------CCCEEEECSS
T ss_pred ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCC------------CeEEEEEcccCCCCCcceEEEeCC
Confidence 457899999965 4444432 23456899999888999885432 36888888762 222222100
Q ss_pred CCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc-ccccceeec
Q 007140 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWC 307 (616)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~ws 307 (616)
+ .....+...+.+. .|||+.. ..+.+.+.+. +++..+.+.... .....++..
T Consensus 158 ~------------~~p~glavD~~~~-~lY~~d~-----------~~~~I~~~~~---~g~~~~~l~~~~~~~P~~iavd 210 (400)
T 3p5b_L 158 I------------QAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVD 210 (400)
T ss_dssp C------------SCEEEEEEETTTT-EEEEEET-----------TTTEEEEECT---TTCSEEEEEECSSCCEEEEEEE
T ss_pred C------------CCcccEEEEecCC-ceEEEEC-----------CCCeEEEEeC---CCCceEEEEeCCCCCcceEEEe
Confidence 0 0012333333332 4777621 1235555565 544444444322 234456777
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
|.+..|++.++.. ..+|+++++++. ..+.+....+.. |. .++++++++.||+...
T Consensus 211 p~~g~ly~td~~~--~~~I~~~~~dG~--~~~~~~~~~l~~----P~--glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 211 PVHGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQW----PN--GITLDLLSGRLYWVDS 265 (400)
T ss_dssp TTTTEEEEEECSS--SCCEEEEETTSC--SCEEEECSSCSC----EE--EEEEETTTTEEEEEET
T ss_pred cccCeEEEEeCCC--CCEEEEEeCCCC--ccEEEEECCCCc----eE--EEEEEeCCCEEEEEEC
Confidence 7655555544432 237999999873 344443322211 11 1788888888888753
No 287
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=97.22 E-value=0.00064 Score=65.96 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=43.4
Q ss_pred eEEEE-ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-
Q 007140 483 EMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA- 560 (616)
Q Consensus 483 e~i~~-~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~- 560 (616)
+.+++ ...+|.++...+|+|++++ +++ .|+||+.+++. +....|.... ...++++++||+|+.
T Consensus 23 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~--~p~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv~~ 87 (283)
T 4b6g_A 23 QVWAHHAQTLQCEMKFAVYLPNNPE-NRP--LGVIYWLSGLT-----------CTEQNFITKS-GFQRYAAEHQVIVVAP 87 (283)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCTT-CCC--EEEEEEECCTT-----------CCSHHHHHHS-CTHHHHHHHTCEEEEE
T ss_pred EEEEEechhhCCceEEEEEeCCCCC-CCC--CCEEEEEcCCC-----------CCccchhhcc-cHHHHHhhCCeEEEEe
Confidence 33444 4457899999999999986 333 48898884321 0001221001 235788899999999
Q ss_pred C--CCCCcc
Q 007140 561 G--PSIPII 567 (616)
Q Consensus 561 n--~R~GS~ 567 (616)
| +| |..
T Consensus 88 d~~~r-g~~ 95 (283)
T 4b6g_A 88 DTSPR-GEQ 95 (283)
T ss_dssp CSSCC-STT
T ss_pred ccccc-ccc
Confidence 8 56 654
No 288
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=97.21 E-value=0.0011 Score=63.34 Aligned_cols=99 Identities=8% Similarity=0.036 Sum_probs=63.4
Q ss_pred ceeEEEEECC--CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEE
Q 007140 481 QKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 481 ~~e~i~~~~~--DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~V 558 (616)
..+.+++... +|.. .+.|++|.....+ +.|+||+.++.. +....| . ...+.|+++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~-~~~l~~p~~~~~~---~~p~vv~~HG~~-----------~~~~~~---~-~~~~~l~~~G~~v 84 (262)
T 1jfr_A 24 ATSQTSVSSLVASGFG-GGTIYYPTSTADG---TFGAVVISPGFT-----------AYQSSI---A-WLGPRLASQGFVV 84 (262)
T ss_dssp CEEEEEECTTTCSSSC-CEEEEEESCCTTC---CEEEEEEECCTT-----------CCGGGT---T-THHHHHHTTTCEE
T ss_pred CccceEecceeccCCC-ceeEEecCCCCCC---CCCEEEEeCCcC-----------CCchhH---H-HHHHHHHhCCCEE
Confidence 4555666655 4443 5788999774322 338888883310 111122 2 4567899999999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHH----cCCccCCceEEEe
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR----RGVGLPILYLNTT 608 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~----~~~vD~~ri~~~~ 608 (616)
+. |+| |.... ......|+.+++++|.+ ...+|.+||++-+
T Consensus 85 ~~~d~~-g~g~~---------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G 129 (262)
T 1jfr_A 85 FTIDTN-TTLDQ---------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMG 129 (262)
T ss_dssp EEECCS-STTCC---------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEE
T ss_pred EEeCCC-CCCCC---------CchhHHHHHHHHHHHHhccccccccCcccEEEEE
Confidence 99 999 74221 22456789999999988 4556777877654
No 289
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=97.20 E-value=0.00082 Score=66.40 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=65.8
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh-hCCeEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la-~~Gy~Vl 559 (616)
..+.+++++.|| .+.+++| |. . .+.|+||++|++ +.+.++...| . .....|+ ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~---~---~~~p~vv~~HGg--------g~~~g~~~~~---~-~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ---K---PDSPVLVYYHGG--------GFVICSIESH---D-ALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES---S---SSEEEEEEECCS--------TTTSCCTGGG---H-HHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC---C---CCceEEEEECCc--------ccccCChhHh---H-HHHHHHHHHhCCEEE
Confidence 577888988888 8999999 42 1 234899999432 1111211222 1 3455677 6899999
Q ss_pred E-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC---CccCCceEEEe
Q 007140 560 A-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VGLPILYLNTT 608 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~---~vD~~ri~~~~ 608 (616)
. ||| |.... .|+ ...+|+.++++||.+.. -+|++||+|-+
T Consensus 115 ~~dyr-g~g~~--~~p------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G 158 (311)
T 1jji_A 115 SVDYR-LAPEH--KFP------AAVYDCYDATKWVAENAEELRIDPSKIFVGG 158 (311)
T ss_dssp EEECC-CTTTS--CTT------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred EecCC-CCCCC--CCC------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEE
Confidence 9 999 75322 122 35789999999998752 37888988865
No 290
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.20 E-value=0.0025 Score=66.20 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=72.6
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC-----ce------EecccCCCccccccccceEEecC-Cc
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-----EA------KPLFESPDICLNAVFGSFVWVNN-ST 99 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g-----~~------~~lt~~~~~~~~~~~~~~~wspd-g~ 99 (616)
.+....|||||++||...... .....|.+|++.++ +. ..+.... ...+..+.|+|+ ++
T Consensus 94 ~v~~l~~spdg~~lav~~~sg------s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h----~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS------EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA----GGMVIDMKWNPTVPS 163 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET------TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG----GGSEEEEEECSSCTT
T ss_pred cccEEEEcCCCCEEEEEEecc------CCCceEEEEEccccccCCcCCcceeeeeeccCCC----CCceEEEEECCCCCC
Confidence 478899999999998743211 23467888888654 11 1111100 112568999998 56
Q ss_pred EEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCCee--ecCCCCc
Q 007140 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK--DFGTPAV 176 (616)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~~~--~l~~~~~ 176 (616)
.|+.... ...|.++|+ ++... .......
T Consensus 164 ~las~s~-------------------------------------------------Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 164 MVAVCLA-------------------------------------------------DGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp EEEEEET-------------------------------------------------TSCEEEEEESSSEEEEEEECGGGC
T ss_pred EEEEEEC-------------------------------------------------CCeEEEEEcCCCcceeeccCCCCc
Confidence 6555311 123555565 33211 1122235
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEe
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (616)
+..++|||||++|+....+ ..|.+||..+...+.+
T Consensus 195 v~~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp EEEEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccc
Confidence 6789999999999988643 2688999885554444
No 291
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.18 E-value=0.19 Score=48.89 Aligned_cols=68 Identities=15% Similarity=0.246 Sum_probs=42.8
Q ss_pred CCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCC
Q 007140 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (616)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (616)
...+.+.+++.+.....++|+|+|+ | |++.. ....|++++.+++....+ .... ....+.+++||
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~-l-yv~d~--------~~~~I~~~d~~g~~~~~~-~~~~-----~p~gia~~~dG 83 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGT-I-FVTNH--------EVGEIVSITPDGNQQIHA-TVEG-----KVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSC-E-EEEET--------TTTEEEEECTTCCEEEEE-ECSS-----EEEEEEECTTS
T ss_pred CCceEeEeCCCCCCcceEEECCCCC-E-EEEeC--------CCCeEEEECCCCceEEEE-eCCC-----CceeEEEcCCC
Confidence 3455666666554567889999998 4 44432 346899999876533332 2222 14578899999
Q ss_pred cEEEE
Q 007140 99 TLLIF 103 (616)
Q Consensus 99 ~~l~~ 103 (616)
+ |++
T Consensus 84 ~-l~v 87 (306)
T 2p4o_A 84 D-LVA 87 (306)
T ss_dssp C-EEE
T ss_pred c-EEE
Confidence 8 444
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.16 E-value=0.024 Score=58.76 Aligned_cols=116 Identities=9% Similarity=0.104 Sum_probs=62.0
Q ss_pred ceeeeeECCC-CcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCC
Q 007140 176 VYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (616)
Q Consensus 176 ~~~~~~~SpD-g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (616)
.+..++|+|+ ++.|+....+ ..|.+||+..+.... ..... ......+.|+|||+
T Consensus 151 ~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~-~~~~~-----------~~~v~~v~wspdg~ 205 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVC-ATLPS-----------TVAVTSVCWSPKGK 205 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEE-EEECG-----------GGCEEEEEECTTSS
T ss_pred ceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCccee-eccCC-----------CCceeEEEEcCCCC
Confidence 5678999998 5666655432 368899987653221 11000 11134689999998
Q ss_pred ceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eeccc-------cccccceeecCCCceEEEeeecc---Ccc
Q 007140 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL-------DLRFRSVSWCDDSLALVNETWYK---TSQ 323 (616)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~-------~~~~~~~~wspDg~~l~~~~~~~---~~~ 323 (616)
. |+-. . ....+.+|+. . ++.. .+... ......+.|++++..++.-...+ ...
T Consensus 206 ~-lasg-s-----------~dg~v~iwd~---~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 206 Q-LAVG-K-----------QNGTVVQYLP---T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp C-EEEE-E-----------TTSCEEEECT---T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred E-EEEE-c-----------CCCcEEEEcc---C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 4 4322 1 2235666676 3 2322 22211 11456788999887654322222 122
Q ss_pred EEEEEEeCCC
Q 007140 324 TRTWLVCPGS 333 (616)
Q Consensus 324 ~~l~~~d~~~ 333 (616)
..+..+++..
T Consensus 269 ~~v~i~~l~~ 278 (434)
T 2oit_A 269 PDVVMALLPK 278 (434)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEEecc
Confidence 3466666654
No 293
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.16 E-value=0.084 Score=52.08 Aligned_cols=120 Identities=10% Similarity=0.086 Sum_probs=61.9
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC-CceEEEecCCCCCCCCCccccCccCCCCcceeecCCCc
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
...++++|++..|+++... ...|.+++.+ ++..+.+..... ......+.++| |
T Consensus 198 p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~~~~~-----------~~~~~~~~~~p-g-- 251 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIKHASF-----------GRNVFAISYIP-G-- 251 (329)
T ss_dssp EEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEECCTTT-----------TTCEEEEEEET-T--
T ss_pred CcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEecccc-----------CCCcceeeecC-C--
Confidence 3578999997778777543 2378899988 555555432100 01123466777 2
Q ss_pred eEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc----ccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
+++. .++... +.......+++++. ..|+...... .......++++|||..++.+.. ..+|+++++
T Consensus 252 -~~~~--~~g~~~-v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~----~~~I~~~~~ 320 (329)
T 3fvz_A 252 -FLFA--VNGKPY-FGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH----TNTVWKFTL 320 (329)
T ss_dssp -EEEE--EECCCC-TTCSCCCCEEEEET---TTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESS----SCCEEEEEE
T ss_pred -EEEE--eCCCEE-eccCCCcEEEEEEc---CCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECC----CCEEEEEeC
Confidence 2232 122111 11112234555564 4444443321 1122456788999954555431 226777777
Q ss_pred CC
Q 007140 332 GS 333 (616)
Q Consensus 332 ~~ 333 (616)
++
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 294
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=97.15 E-value=0.0011 Score=62.93 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=60.0
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEEEE-C
Q 007140 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLA-G 561 (616)
Q Consensus 484 ~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~Vl~-n 561 (616)
.++++ .||.+|+++++.|.+.. + +.|+||+.++ .........| ...+.|+++||.|+. |
T Consensus 3 ~~~~~-~~g~~l~~~~~~p~~~~--~--~~p~vvl~HG--------------~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 3 AMYID-CDGIKLNAYLDMPKNNP--E--KCPLCIIIHG--------------FTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEE-ETTEEEEEEEECCTTCC--S--SEEEEEEECC--------------TTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEe-cCCcEEEEEEEccCCCC--C--CCCEEEEEcC--------------CCcccccccHHHHHHHHHHCCCEEEEec
Confidence 35565 49999999999997632 1 2277777732 1111000011 346788999999999 9
Q ss_pred CCCCccccCCCccC-ChhH-HHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 562 PSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 562 ~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
+| | +|..-.. ..+. ....+|+.+.+++|.+++.++ ++.+-
T Consensus 64 ~~-G---~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~--~~~lv 105 (251)
T 2wtm_A 64 MY-G---HGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVT--DIYMA 105 (251)
T ss_dssp CT-T---STTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEE--EEEEE
T ss_pred CC-C---CCCCCCccccCCHHHHHHHHHHHHHHHHcCcccc--eEEEE
Confidence 99 6 3432211 2222 245789999999987665444 55443
No 295
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.016 Score=61.54 Aligned_cols=133 Identities=6% Similarity=-0.033 Sum_probs=70.7
Q ss_pred ceEEEEeC-CC-Cee-ecC-CCCceeee--eECCCC-cEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCC
Q 007140 157 AQLVLGSL-DG-TAK-DFG-TPAVYTAV--EPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLP 228 (616)
Q Consensus 157 ~~l~~~d~-~g-~~~-~l~-~~~~~~~~--~~SpDg-~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~ 228 (616)
..|.++|+ ++ .+. .+. ....+..+ .|+|+| +.|+-.+.+ ..+.+||+..++ ...+....
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------------~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------------GYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------------SEEEEECGGGHHHHCEEEEEC
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------------CeEEEEECCCCCccccccccc
Confidence 35666677 34 222 222 23345666 679998 555555432 368899986432 22221100
Q ss_pred CCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCC-ceEeccccccccceeec
Q 007140 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWC 307 (616)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~~~~~~~~~~~ws 307 (616)
. ......+.|+||++. + +.. ...+.+.+|+. ..+. ...+......+..++||
T Consensus 354 ~-----------~~~v~~v~fsp~~~~-l--~s~----------~~d~tv~lwd~---~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 354 R-----------GSNLVPVVYCPQIYS-Y--IYS----------DGASSLRAVPS---RAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp S-----------CCSCCCEEEETTTTE-E--EEE----------CSSSEEEEEET---TCTTCCEEEEECSSCEEEEECC
T ss_pred c-----------cCcccceEeCCCcCe-E--EEe----------CCCCcEEEEEC---cccccceeeecCCCceEEEEeC
Confidence 0 001235889999873 2 211 11234566665 3333 34455555667889999
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCC
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
|||..|+.... ++ .+.+.++..
T Consensus 407 p~g~~l~Sgs~--Dg--tv~lwd~~~ 428 (524)
T 2j04_B 407 RLHPMVLAGSA--DG--SLIITNAAR 428 (524)
T ss_dssp SSCCBCEEEET--TT--EEECCBSCS
T ss_pred CCCCeEEEEEC--CC--EEEEEechH
Confidence 99987766542 23 344555543
No 296
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=97.09 E-value=0.0028 Score=61.17 Aligned_cols=94 Identities=11% Similarity=0.178 Sum_probs=60.3
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCC
Q 007140 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSI 564 (616)
Q Consensus 486 ~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~ 564 (616)
.++-.+|.++ .+|.|.+ . +.|+|||+|+|. -+.++...| .......+++.||.|+. |||
T Consensus 8 ~~~~~~~~~~--~~y~p~~-~-----~~p~iv~~HGGg--------~~~g~~~~~---~~~~~~~l~~~g~~Vi~vdYr- 67 (274)
T 2qru_A 8 NQTLANGATV--TIYPTTT-E-----PTNYVVYLHGGG--------MIYGTKSDL---PEELKELFTSNGYTVLALDYL- 67 (274)
T ss_dssp EEECTTSCEE--EEECCSS-S-----SCEEEEEECCST--------TTSCCGGGC---CHHHHHHHHTTTEEEEEECCC-
T ss_pred cccccCCeeE--EEEcCCC-C-----CCcEEEEEeCcc--------ccCCChhhc---hHHHHHHHHHCCCEEEEeCCC-
Confidence 4455577766 5788865 1 238999994321 112221222 11234568889999999 999
Q ss_pred CccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 565 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 565 GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+.... .| ...++|+.++++||.++.. +++||.|-+
T Consensus 68 laPe~--~~------p~~~~D~~~al~~l~~~~~-~~~~i~l~G 102 (274)
T 2qru_A 68 LAPNT--KI------DHILRTLTETFQLLNEEII-QNQSFGLCG 102 (274)
T ss_dssp CTTTS--CH------HHHHHHHHHHHHHHHHHTT-TTCCEEEEE
T ss_pred CCCCC--CC------cHHHHHHHHHHHHHHhccc-cCCcEEEEE
Confidence 75321 22 2569999999999998742 278888765
No 297
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=97.09 E-value=0.00023 Score=72.74 Aligned_cols=62 Identities=10% Similarity=-0.030 Sum_probs=41.9
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccC--------------CCccC-Chh-HH-----------HHHHHHHHHHHHHHH--
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEG--------------DKLPN-DRF-VE-----------QLVSSAEAAVEEVVR-- 595 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG--------------~~f~~-~~~-g~-----------~~~~D~~~~v~~l~~-- 595 (616)
...+.||++||+|+. |+| |..+-. ..|.. ... |. ...+|+..++++|.+
T Consensus 116 ~~a~~La~~Gy~V~~~d~~-g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 194 (383)
T 3d59_A 116 AIGIDLASHGFIVAAVEHR-DRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDID 194 (383)
T ss_dssp HHHHHHHHTTCEEEEECCC-SSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCceEEEEeccC-CCCccceeecCCccccccCCceeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999 999 753311 11100 000 21 125799999999976
Q ss_pred ------------------cCCccCCceEEEe
Q 007140 596 ------------------RGVGLPILYLNTT 608 (616)
Q Consensus 596 ------------------~~~vD~~ri~~~~ 608 (616)
++.+|++||++.+
T Consensus 195 ~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G 225 (383)
T 3d59_A 195 HGKPVKNALDLKFDMEQLKDSIDREKIAVIG 225 (383)
T ss_dssp TTCCCCCSSCCSCCGGGGTTCEEEEEEEEEE
T ss_pred cCCccccccccccchhhhhccccccceeEEE
Confidence 5678999998876
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.08 E-value=0.031 Score=61.66 Aligned_cols=121 Identities=12% Similarity=-0.048 Sum_probs=68.1
Q ss_pred eeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceE
Q 007140 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTL 257 (616)
Q Consensus 178 ~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l 257 (616)
..+++.+.+..|+++... ...|++++++++..+.+....+. ....+.+.|++. .|
T Consensus 456 ~glavD~~~g~LY~tD~~------------~~~I~v~d~dg~~~~~l~~~~~~------------~P~giavDp~~g-~l 510 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSV------------LGTVSVADTKGVKRKTLFREQGS------------KPRAIVVDPVHG-FM 510 (699)
T ss_dssp CCEECCCSSSBCEECCTT------------TSCEEEEBSSSCCEEEECCCSSC------------CCCCEECCSSSS-CC
T ss_pred ceEEEEeeCCcEEEEecc------------CCeEEEEecCCCceEEEEeCCCC------------CcceEEEccCCC-cE
Confidence 467787777777776322 24688999988766655431111 123566777654 36
Q ss_pred EEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc-cccccceeecCCCceEEEeeeccCccEEEEEEeCCCCCC
Q 007140 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV 336 (616)
Q Consensus 258 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 336 (616)
||... .....|+.++. ++...+.+... ......++|+|++..|++... ...+|+++++++.
T Consensus 511 y~td~----------~~~~~I~~~~~---dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~-- 572 (699)
T 1n7d_A 511 YWTDW----------GTPAKIKKGGL---NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG-- 572 (699)
T ss_dssp EECCC----------SSSCCEEBCCS---SSCCCCEESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSS--
T ss_pred EEccc----------CCCCeEEEEeC---CCCCeeEEEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCC--
Confidence 66421 11234555555 44333334322 223456899998766555432 2237999999873
Q ss_pred CceEE
Q 007140 337 APRVL 341 (616)
Q Consensus 337 ~~~~l 341 (616)
..+.+
T Consensus 573 ~~~~~ 577 (699)
T 1n7d_A 573 NRKTI 577 (699)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 33444
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.08 E-value=0.23 Score=55.22 Aligned_cols=123 Identities=12% Similarity=-0.046 Sum_probs=71.4
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCce
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (616)
...+++.+.++.|+++... ...|++++++|+..+.|....+. ..+++...|.+. .
T Consensus 473 P~GLAvD~~~~~LY~tD~~------------~~~I~v~~ldG~~~~~l~~~~l~------------~P~gIaVDp~~g-~ 527 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSV------------LGTVSVADTKGVKRKTLFRENGS------------KPRAIVVDPVHG-F 527 (791)
T ss_dssp CCEEEEETTTTEEEEEETT------------TTEEEEEETTSSSEEEEEECTTC------------CEEEEEEETTTT-E
T ss_pred cceeeeeecCCcEEEEecC------------CCeEEEEeCCCCeEEEEEeCCCC------------CcceEEEecCCC-C
Confidence 3478888889899888543 24799999998876665431111 123566666654 4
Q ss_pred EEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCceEEEeeeccCccEEEEEEeCCCCC
Q 007140 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (616)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (616)
|||.... ....|..++. +|...+.+.... .....+++.+++..|++.+.. ..+|+++++++.
T Consensus 528 LYwtD~g----------~~~~I~~~~~---dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~---~~~I~~~d~dG~- 590 (791)
T 3m0c_C 528 MYWTDWG----------TPAKIKKGGL---NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDVNGG- 590 (791)
T ss_dssp EEEEECS----------SSCEEEEEET---TSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTSC-
T ss_pred EEEecCC----------CCCeEEEEec---CCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC---CCcEEEEecCCC-
Confidence 7776321 1134555565 544444444332 234456777666555554322 237999999874
Q ss_pred CCceEEe
Q 007140 336 VAPRVLF 342 (616)
Q Consensus 336 ~~~~~l~ 342 (616)
..+.+.
T Consensus 591 -~~~~v~ 596 (791)
T 3m0c_C 591 -NRKTIL 596 (791)
T ss_dssp -SCEEEE
T ss_pred -ceEEEe
Confidence 344443
No 300
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.06 E-value=0.22 Score=48.94 Aligned_cols=159 Identities=12% Similarity=0.117 Sum_probs=74.0
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC-CCccccCccCCCCcceeecCCCc
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED-IPVCYNSVREGMRSISWRADKPS 255 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~wspdg~~ 255 (616)
...++++|++..|+++.... ...|.+++.++.....+........ .+. .......+.++|++.
T Consensus 145 P~~ia~~~~~g~lyv~d~~~-----------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~----~~~~p~gia~d~~~g- 208 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYC-----------NSRIVQFSPSGKFVTQWGEESSGSSPRPG----QFSVPHSLALVPHLD- 208 (329)
T ss_dssp EEEEEECTTTCCEEEEECSS-----------CCEEEEECTTSCEEEEECEECCSSSCCTT----EESCEEEEEEETTTT-
T ss_pred CcEEEEeCCCCeEEEEeCCC-----------CCeEEEEcCCCCEEEEeccCCCCCCCCCc----ccCCCcEEEEECCCC-
Confidence 35789999555566664211 2368889977776655532110000 000 001123577888843
Q ss_pred eEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ecc--ccccccceeecCCCceEEEeee-c--cCccEEEEEE
Q 007140 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK--LDLRFRSVSWCDDSLALVNETW-Y--KTSQTRTWLV 329 (616)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~~--~~~~~~~~~wspDg~~l~~~~~-~--~~~~~~l~~~ 329 (616)
.||... ...+.+.+++. .+|+... +.. .......+.|+| +..+..+.. + +.....++++
T Consensus 209 ~l~v~d-----------~~~~~I~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 209 QLCVAD-----------RENGRIQCFKT---DTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp EEEEEE-----------TTTTEEEEEET---TTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEE
T ss_pred EEEEEE-----------CCCCEEEEEEC---CCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEE
Confidence 254441 12234555565 4344332 221 122334567888 444333221 0 1123368888
Q ss_pred eCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 330 CPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 330 d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
++.++ +....+.... ..+..|. .+++++|| .||+...
T Consensus 274 ~~~~g--~~~~~~~~~~-~~~~~p~--~ia~~~dG-~lyvad~ 310 (329)
T 3fvz_A 274 NFSSG--EIIDVFKPVR-KHFDMPH--DIVASEDG-TVYIGDA 310 (329)
T ss_dssp ETTTC--CEEEEECCSS-SCCSSEE--EEEECTTS-EEEEEES
T ss_pred EcCCC--eEEEEEcCCC-CccCCee--EEEECCCC-CEEEEEC
Confidence 87763 2222221100 0011111 27788998 6676653
No 301
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=97.06 E-value=0.0019 Score=58.85 Aligned_cols=92 Identities=5% Similarity=-0.043 Sum_probs=56.7
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCc--hHHHHhhCCeEEEE-CCCCC
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~q~la~~Gy~Vl~-n~R~G 565 (616)
..||.+|++++|.|.+ + . |+||+.++.. +....| . . ..+.|+++||.|+. |+| |
T Consensus 10 ~~~g~~l~~~~~~~~~----~-~--~~vv~~hG~~-----------~~~~~~---~-~~~~~~~l~~~G~~v~~~d~~-g 66 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS----N-R--RSIALFHGYS-----------FTSMDW---D-KADLFNNYSKIGYNVYAPDYP-G 66 (207)
T ss_dssp EETTEEEEEEEECCTT----C-C--EEEEEECCTT-----------CCGGGG---G-GGTHHHHHHTTTEEEEEECCT-T
T ss_pred eeCCcEEEEEEEeccC----C-C--CeEEEECCCC-----------CCcccc---c-hHHHHHHHHhCCCeEEEEcCC-c
Confidence 3489999999999987 1 2 6777773210 111223 1 3 56889999999999 999 6
Q ss_pred ccccCCCccC-ChhHHH-HHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 566 IIGEGDKLPN-DRFVEQ-LVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 566 S~GyG~~f~~-~~~g~~-~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+|..+.. ...... ..+++.+.+..++++ ++.+++++-+
T Consensus 67 ---~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G 106 (207)
T 3bdi_A 67 ---FGRSASSEKYGIDRGDLKHAAEFIRDYLKA--NGVARSVIMG 106 (207)
T ss_dssp ---STTSCCCTTTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEE
T ss_pred ---ccccCcccCCCCCcchHHHHHHHHHHHHHH--cCCCceEEEE
Confidence 4544211 000111 466777777777765 2446776644
No 302
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.06 E-value=0.23 Score=47.61 Aligned_cols=78 Identities=12% Similarity=-0.017 Sum_probs=45.1
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCc-eEecccCCCc
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-AKPLFESPDI 83 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~-~~~lt~~~~~ 83 (616)
..|++.+.++ |+...-...........+.++|||+.|+ +. ...|+.+|. +|+ ...+. ....
T Consensus 15 ~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~----------~~~V~~~d~-~G~~~W~~~-~~~~ 76 (276)
T 3no2_A 15 NKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILF--SY----------SKGAKMITR-DGRELWNIA-APAG 76 (276)
T ss_dssp SEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEE--EC----------BSEEEEECT-TSCEEEEEE-CCTT
T ss_pred CEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEE--eC----------CCCEEEECC-CCCEEEEEc-CCCC
Confidence 3466666543 7665333222212467889999998665 22 246888898 555 33432 2110
Q ss_pred cccccccceEEecCCcEEEE
Q 007140 84 CLNAVFGSFVWVNNSTLLIF 103 (616)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~ 103 (616)
.......+++||+.|+.
T Consensus 77 ---~~~~~~~~~~dG~~lv~ 93 (276)
T 3no2_A 77 ---CEMQTARILPDGNALVA 93 (276)
T ss_dssp ---CEEEEEEECTTSCEEEE
T ss_pred ---ccccccEECCCCCEEEE
Confidence 11446778899987655
No 303
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.06 E-value=0.27 Score=48.16 Aligned_cols=168 Identities=8% Similarity=0.014 Sum_probs=90.0
Q ss_pred cceEEEEeCCC-Ceeec-CCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC----ceEEEecCCCC
Q 007140 156 TAQLVLGSLDG-TAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPP 229 (616)
Q Consensus 156 ~~~l~~~d~~g-~~~~l-~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~ 229 (616)
...|.++|+++ +...+ ........++|+++++.|+++... ...|+++++++ .....+....+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSSC
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCCC
Confidence 45788899954 44443 323345689999998899988643 23788998876 33222221000
Q ss_pred CCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccc-cccccceeecC
Q 007140 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCD 308 (616)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~~~wsp 308 (616)
.....+...+.+. .|||... ..+.+.+++. ++...+.+... ......++..|
T Consensus 77 ------------~~p~glavd~~~~-~ly~~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 77 ------------QAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp ------------SCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred ------------CCcCEEEEeecCC-eEEEEEC-----------CCCEEEEEeC---CCCceEEEEECCCCCcceEEeCC
Confidence 0122455554443 4777621 1234555565 44333444332 23345667787
Q ss_pred CCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
++..+++..+.. ..+|+++++++. ..+.+....+. .|. .++++++++.||+...
T Consensus 130 ~~g~ly~~d~~~--~~~I~~~~~dG~--~~~~~~~~~~~----~P~--gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 130 VHGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQ----WPN--GITLDLLSGRLYWVDS 183 (316)
T ss_dssp TTTEEEEEECSS--SCEEEEEETTSC--CEEEEECSSCS----CEE--EEEEETTTTEEEEEET
T ss_pred CCCEEEEEccCC--CCeEEEEcCCCC--CeEEEEECCCC----Cce--EEEEeccCCEEEEEEC
Confidence 655444433321 248999999873 33334322221 111 2788888888888763
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.03 E-value=0.29 Score=48.04 Aligned_cols=143 Identities=10% Similarity=0.033 Sum_probs=78.7
Q ss_pred ceEEEEeCCCC--ee-ecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC
Q 007140 157 AQLVLGSLDGT--AK-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (616)
Q Consensus 157 ~~l~~~d~~g~--~~-~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (616)
..|++++++|. .. .+... .....+++.+.+..|+++... ...|.+++++|...+.+....+
T Consensus 57 ~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~dG~~~~~l~~~~~--- 121 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVSNLDGSLRKVLFWQEL--- 121 (318)
T ss_dssp TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC---
T ss_pred CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEEEECCCCcEEEEEeCCC---
Confidence 45777777542 11 12111 123467888888888887543 2368899998876555532111
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc-ccccceeecCCCc
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSL 311 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~~~~~wspDg~ 311 (616)
.....+...|.+. .|||.... ....++.++. ++...+.+.... .....++|++++.
T Consensus 122 ---------~~P~giavdp~~g-~ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 122 ---------DQPRAIALDPSSG-FMYWTDWG----------EVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEEQ 178 (318)
T ss_dssp ---------SSEEEEEEEGGGT-EEEEEECS----------SSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ---------CCccEEEEeCCCC-EEEEEecC----------CCCEEEEEEc---CCCCeEEEEECCCCCccEEEEeccCC
Confidence 0123456666543 36665211 1235666565 543444443222 2345688998877
Q ss_pred eEEEeeeccCccEEEEEEeCCCCCCCceEEe
Q 007140 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (616)
.|++.+. ...+|+.+++++. ..+.+.
T Consensus 179 ~lY~aD~---~~~~I~~~d~dG~--~~~~~~ 204 (318)
T 3sov_A 179 KLYWADA---KLNFIHKSNLDGT--NRQAVV 204 (318)
T ss_dssp EEEEEET---TTTEEEEEETTSC--SCEEEE
T ss_pred EEEEEEC---CCCEEEEEcCCCC--ceEEEe
Confidence 6655442 2338999999873 344443
No 305
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=97.02 E-value=0.0011 Score=65.22 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=60.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccc
Q 007140 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIG 568 (616)
Q Consensus 490 ~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~G 568 (616)
.+|.. .+.+++|.+.. +.|+||+.++.. +....| . ...+.|+++||.|+. |+| |.
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~-----------~~~~~~---~-~~~~~la~~G~~vv~~d~~-g~-- 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYT-----------GTQSSI---A-WLGERIASHGFVVIAIDTN-TT-- 134 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTT-----------CCHHHH---H-HHHHHHHTTTEEEEEECCS-ST--
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCc-----------CCHHHH---H-HHHHHHHhCCCEEEEecCC-CC--
Confidence 56654 46788897654 238888883310 000122 1 446789999999999 999 73
Q ss_pred cCCCccCChhHHHHHHHHHHHHHHHHHc------CCccCCceEEEe
Q 007140 569 EGDKLPNDRFVEQLVSSAEAAVEEVVRR------GVGLPILYLNTT 608 (616)
Q Consensus 569 yG~~f~~~~~g~~~~~D~~~~v~~l~~~------~~vD~~ri~~~~ 608 (616)
|.. .....+|+.+++++|.++ ..+|++||++.+
T Consensus 135 -g~s------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G 173 (306)
T 3vis_A 135 -LDQ------PDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMG 173 (306)
T ss_dssp -TCC------HHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEE
T ss_pred -CCC------cchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEE
Confidence 332 224568999999999987 788999998865
No 306
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.01 E-value=0.23 Score=55.23 Aligned_cols=201 Identities=10% Similarity=0.044 Sum_probs=107.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC----ceEecccCCCccccccccceEEecCCcEEEEEecC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g----~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~ 107 (616)
....+.|++.+.+|.++- .....|+++++.+. ....+....-. ....++..+.++.|+++-.
T Consensus 425 ~~~gl~~d~~~~~lY~sD---------~~~~~I~~~~l~g~~~~~~~~~vi~~~l~----~P~GLAvD~~~~~LY~tD~- 490 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISRDIQ----APDGLAVDWIHSNIYWTDS- 490 (791)
T ss_dssp SEEEEEEETTTTEEEEEE---------TTTTEEEEEEC--------CEEEECSSCS----CCCEEEEETTTTEEEEEET-
T ss_pred ceEEEeecccCCeeEEee---------ccceeEEEEeccCCCCCcceeEEEecCCC----CcceeeeeecCCcEEEEec-
Confidence 355677888777766653 23467888888752 22233211110 1345666666777766410
Q ss_pred CCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECC
Q 007140 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSP 184 (616)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~Sp 184 (616)
...+|.+++++|. .+.|... ..-..+++.|
T Consensus 491 -----------------------------------------------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp 523 (791)
T 3m0c_C 491 -----------------------------------------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 523 (791)
T ss_dssp -----------------------------------------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------------------------------------------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEec
Confidence 1357888888774 3344322 2345889999
Q ss_pred CCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeec
Q 007140 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (616)
Q Consensus 185 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (616)
.+.+|+++.... ...|++++++|...+.+....+. ....+...+.+. .|||+..
T Consensus 524 ~~g~LYwtD~g~-----------~~~I~~~~~dG~~~~~lv~~~l~------------~P~GLavD~~~~-~LYwaD~-- 577 (791)
T 3m0c_C 524 VHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENIQ------------WPNGITLDLLSG-RLYWVDS-- 577 (791)
T ss_dssp TTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSCS------------CEEEEEEETTTT-EEEEEET--
T ss_pred CCCCEEEecCCC-----------CCeEEEEecCCCceEEEEeCCCC------------CceEEEEecCCC-eEEEEeC--
Confidence 988999886432 23699999998877665431110 012466666654 4887721
Q ss_pred CCCcccccCCCceeEeccCCCCCCCCceEeccccccc-cceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF-RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
..+.|..++. +|...+.+....... ..+..+.++..|+..++. ...|++++..++
T Consensus 578 ---------~~~~I~~~d~---dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~---~~~I~~~dk~tG 633 (791)
T 3m0c_C 578 ---------KLHSISSIDV---NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRLTG 633 (791)
T ss_dssp ---------TTTEEEEEET---TSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT---TTEEEEEETTTC
T ss_pred ---------CCCcEEEEec---CCCceEEEecCCCccCCCCEEEEeCCEEEEEECC---CCEEEEEeCCCC
Confidence 1234555565 554444444322211 122233233344444332 237888886553
No 307
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=97.00 E-value=0.00084 Score=66.72 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=39.8
Q ss_pred HHHHhh-CCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 548 SLIFLA-RRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 548 ~q~la~-~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
...|+. .||+|+. ||| ++.... |. ..++|+.++++||.++ -+|++||+|-+
T Consensus 103 ~~~la~~~g~~v~~~dyr-~~~~~~--~~------~~~~d~~~a~~~l~~~-~~~~~~i~l~G 155 (322)
T 3k6k_A 103 TTQLAKQSSATLWSLDYR-LAPENP--FP------AAVDDCVAAYRALLKT-AGSADRIIIAG 155 (322)
T ss_dssp HHHHHHHHTCEEEEECCC-CTTTSC--TT------HHHHHHHHHHHHHHHH-HSSGGGEEEEE
T ss_pred HHHHHHhcCCEEEEeeCC-CCCCCC--Cc------hHHHHHHHHHHHHHHc-CCCCccEEEEe
Confidence 455665 4999999 999 865431 22 4689999999999988 46999999876
No 308
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=96.99 E-value=0.0011 Score=64.09 Aligned_cols=69 Identities=17% Similarity=0.249 Sum_probs=45.3
Q ss_pred ceeEEEEEC-CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~-~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.+++.+ .+|.++...+|+|+++++++++ |+||+.|+.. +....|.... ...++++++||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--p~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGAKV--PVLYWLSGLT-----------CSDENFMQKA-GAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTCCE--EEEEEECCTT-----------CCSSHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCCCc--cEEEEecCCC-----------CChhHHhhcc-cHHHHHhhCCeEEE
Confidence 445556644 5889999999999998765555 8888884321 0011221101 23578889999999
Q ss_pred E-CCC
Q 007140 560 A-GPS 563 (616)
Q Consensus 560 ~-n~R 563 (616)
. |.|
T Consensus 82 ~pd~~ 86 (280)
T 3i6y_A 82 APDTS 86 (280)
T ss_dssp EECSS
T ss_pred EeCCc
Confidence 9 875
No 309
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=96.98 E-value=0.00053 Score=70.50 Aligned_cols=108 Identities=8% Similarity=-0.083 Sum_probs=63.4
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeE--
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA-- 557 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~-- 557 (616)
..+.++|.+. .|.++..+||+|++++ .++| |+|++.+++ .+..........+.|+++|++
T Consensus 167 ~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~--PvlvllHG~--------------~~~~~~~~~~~~~~l~~~g~~~p 229 (403)
T 3c8d_A 167 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEER--PLAVLLDGE--------------FWAQSMPVWPVLTSLTHRQQLPP 229 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCC--CEEEESSHH--------------HHHHTSCCHHHHHHHHHTTSSCS
T ss_pred ceEEEEEEccccCCcEEEEEEeCCCCC-CCCC--CEEEEeCCH--------------HHhhcCcHHHHHHHHHHcCCCCC
Confidence 6677788764 6789999999999885 3445 889988331 111000011345789999986
Q ss_pred --EEE-CCCCCccccCCCccC-ChhHHHHHHHHHHHHHHHHHc-C-CccCCceEEEee
Q 007140 558 --VLA-GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRR-G-VGLPILYLNTTA 609 (616)
Q Consensus 558 --Vl~-n~R~GS~GyG~~f~~-~~~g~~~~~D~~~~v~~l~~~-~-~vD~~ri~~~~~ 609 (616)
|+. |++ |+.++..++.. ..+-....++ .+.++.++ + .+|++|++|.+.
T Consensus 230 ~iVV~~d~~-~~~~r~~~~~~~~~~~~~l~~e---l~~~i~~~~~~~~d~~~~~l~G~ 283 (403)
T 3c8d_A 230 AVYVLIDAI-DTTHRAHELPCNADFWLAVQQE---LLPLVKVIAPFSDRADRTVVAGQ 283 (403)
T ss_dssp CEEEEECCC-SHHHHHHHSSSCHHHHHHHHHT---HHHHHHHHSCCCCCGGGCEEEEE
T ss_pred eEEEEECCC-CCccccccCCChHHHHHHHHHH---HHHHHHHHCCCCCCCCceEEEEE
Confidence 888 999 86555544432 2222112233 44555554 4 379999999874
No 310
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=96.97 E-value=0.0029 Score=60.39 Aligned_cols=102 Identities=14% Similarity=0.014 Sum_probs=63.8
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~ 560 (616)
..+.+.++ .||.+|+++++.|.+- + .|+||++++.. ++.+.. ......+.|+++||.|+.
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~~----~--~p~vv~~HG~~-----------~~~~~~--~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFGE----I--YDMAIIFHGFT-----------ANRNTS--LLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSSS----S--EEEEEEECCTT-----------CCTTCH--HHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCCC----C--CCEEEEEcCCC-----------CCcccc--HHHHHHHHHHhCCcEEEE
Confidence 55666665 5999999999998642 1 27888883310 000010 001446789999999999
Q ss_pred -CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 561 -GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 561 -n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|+| | +|..-.. ..+. ....+|+.+.++++.++.-++ +|.+-+
T Consensus 81 ~d~~-G---~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~--~i~l~G 125 (270)
T 3pfb_A 81 FDFN-G---HGDSDGKFENMTVLNEIEDANAILNYVKTDPHVR--NIYLVG 125 (270)
T ss_dssp ECCT-T---STTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEE--EEEEEE
T ss_pred Eccc-c---ccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCC--eEEEEE
Confidence 999 6 4443222 2222 346789999999998764333 666543
No 311
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=96.95 E-value=0.0011 Score=63.96 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=43.5
Q ss_pred ceeEEEE-ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~-~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.+++ ...+|.++...+|+|++++ +++ .|+||+.++.. +....|.... ...++++.+||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~--~p~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv 78 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI-HEP--CPVVWYLSGLT-----------CTHANVMEKG-EYRRMASELGLVVV 78 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TSC--EEEEEEECCTT-----------CCSHHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC-CCC--CCEEEEEcCCC-----------CCccchhhcc-cHHHHHhhCCeEEE
Confidence 4445555 4567899999999999875 333 48898884321 0011221100 13456777799999
Q ss_pred E-CCCCC
Q 007140 560 A-GPSIP 565 (616)
Q Consensus 560 ~-n~R~G 565 (616)
. |+| |
T Consensus 79 ~~d~~-g 84 (278)
T 3e4d_A 79 CPDTS-P 84 (278)
T ss_dssp ECCSS-C
T ss_pred ecCCc-c
Confidence 9 987 5
No 312
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.95 E-value=0.29 Score=46.85 Aligned_cols=181 Identities=12% Similarity=-0.016 Sum_probs=96.3
Q ss_pred CceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccc
Q 007140 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (616)
Q Consensus 60 ~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~ 139 (616)
....|+++|.++|+...-+..... .......++|||+.|+ ..
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilv-s~---------------------------------- 54 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILF-SY---------------------------------- 54 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEE-EC----------------------------------
T ss_pred CCCEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEE-eC----------------------------------
Confidence 457888889888875433322210 1145677889998655 31
Q ss_pred ccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeC
Q 007140 140 NLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (616)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (616)
...++.+|.+|+ ..++..+ .......++|||+.|+...... ..++.++.
T Consensus 55 ----------------~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~------------~~v~~vd~ 106 (276)
T 3no2_A 55 ----------------SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP------------STILEVNM 106 (276)
T ss_dssp ----------------BSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTT------------EEEEEECT
T ss_pred ----------------CCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCC------------CEEEEEeC
Confidence 012444555443 2333322 2345788999999877654311 25777888
Q ss_pred CCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc
Q 007140 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (616)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 296 (616)
+|+..+.+.-.. ..+. .....+.....+||. +++.. .....++.++. + |+..--..
T Consensus 107 ~Gk~l~~~~~~~---~~~~----~~~~~~~v~~~~~G~--~lv~~-----------~~~~~v~~~d~---~-G~~~w~~~ 162 (276)
T 3no2_A 107 KGEVLSKTEFET---GIER----PHAQFRQINKNKKGN--YLVPL-----------FATSEVREIAP---N-GQLLNSVK 162 (276)
T ss_dssp TSCEEEEEEECC---SCSS----GGGSCSCCEECTTSC--EEEEE-----------TTTTEEEEECT---T-SCEEEEEE
T ss_pred CCCEEEEEeccC---CCCc----ccccccCceECCCCC--EEEEe-----------cCCCEEEEECC---C-CCEEEEEE
Confidence 777665543110 0000 000122355677876 33321 12345667776 5 44332222
Q ss_pred ccccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 297 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
...........++|..++.... ..+|+.+|.+++
T Consensus 163 ~~~~~~~~~~~~~g~~~v~~~~----~~~v~~~d~~tG 196 (276)
T 3no2_A 163 LSGTPFSSAFLDNGDCLVACGD----AHCFVQLNLESN 196 (276)
T ss_dssp CSSCCCEEEECTTSCEEEECBT----TSEEEEECTTTC
T ss_pred CCCCccceeEcCCCCEEEEeCC----CCeEEEEeCcCC
Confidence 2222334556788887666542 127999999863
No 313
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=96.95 E-value=0.004 Score=61.21 Aligned_cols=103 Identities=14% Similarity=0.020 Sum_probs=59.0
Q ss_pred eeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-
Q 007140 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA- 560 (616)
Q Consensus 482 ~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~- 560 (616)
.+...++..||.+|+++.+.|.+-.+.+ . |+||+.++- +. + ...| . ...+.|+++||.|+.
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~~~-~--~~VvllHG~--------g~-~--~~~~---~-~~~~~L~~~G~~Vi~~ 68 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVPFK-N--NTILIASGF--------AR-R--MDHF---A-GLAEYLSTNGFHVFRY 68 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCC-S--CEEEEECTT--------CG-G--GGGG---H-HHHHHHHTTTCCEEEE
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCCCC-C--CEEEEecCC--------cc-C--chHH---H-HHHHHHHHCCCEEEEe
Confidence 3445677889999999999886532211 2 566666220 00 0 0122 1 446789999999999
Q ss_pred CCCCCccccCCCccCChhH-HHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 561 GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 561 n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
|+| |-.|....- ...+. ....+|+.+.+++|.+.+ .+++.+-
T Consensus 69 D~r-Gh~G~S~~~-~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lv 111 (305)
T 1tht_A 69 DSL-HHVGLSSGS-IDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLI 111 (305)
T ss_dssp CCC-BCC---------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEE
T ss_pred eCC-CCCCCCCCc-ccceehHHHHHHHHHHHHHHHhCC---CCceEEE
Confidence 999 632332211 12222 234688888888887544 2455543
No 314
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=96.93 E-value=0.0058 Score=58.21 Aligned_cols=95 Identities=12% Similarity=0.120 Sum_probs=61.0
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CC
Q 007140 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GP 562 (616)
Q Consensus 484 ~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~ 562 (616)
...++-.+|..+...+|.|.+ . +.|+||++|++.+ ..++...| . ...+.|+++||.|+. |+
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~-~-----~~p~vv~~HGgg~--------~~~~~~~~---~-~~~~~l~~~G~~v~~~d~ 101 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG-T-----PVGLFVFVHGGYW--------MAFDKSSW---S-HLAVGALSKGWAVAMPSY 101 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS-S-----CSEEEEEECCSTT--------TSCCGGGC---G-GGGHHHHHTTEEEEEECC
T ss_pred ccccccCCCCCceEEEEccCC-C-----CCCEEEEEcCccc--------ccCChHHH---H-HHHHHHHhCCCEEEEeCC
Confidence 344444567777778999977 1 2288888843210 00111222 1 446789999999999 99
Q ss_pred CCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 563 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 563 R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
| |+..+. -....+|+.+++++|..+.. +||.+-+
T Consensus 102 ~-~~~~~~--------~~~~~~d~~~~~~~l~~~~~---~~i~l~G 135 (262)
T 2pbl_A 102 E-LCPEVR--------ISEITQQISQAVTAAAKEID---GPIVLAG 135 (262)
T ss_dssp C-CTTTSC--------HHHHHHHHHHHHHHHHHHSC---SCEEEEE
T ss_pred C-CCCCCC--------hHHHHHHHHHHHHHHHHhcc---CCEEEEE
Confidence 9 864321 23468999999999988643 6776654
No 315
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.92 E-value=0.23 Score=49.32 Aligned_cols=142 Identities=11% Similarity=0.025 Sum_probs=74.3
Q ss_pred CCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc--cccccceEEec
Q 007140 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVN 96 (616)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~--~~~~~~~~wsp 96 (616)
|+.+.+..+. .....+.++|||+. .+...+-. .+...||.++ +|+.+.+........ ......+.+++
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~~-~v~~~~~~-----~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~ 76 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGRL-FLSLHQFY-----QPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDG 76 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSCE-EEEECGGG-----CCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECS
T ss_pred ceeEEEEEcC--CCcceEEECCCCCE-EEEeCCCC-----CCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcC
Confidence 6667776554 24778899999974 32222210 1225788888 565554321110000 01134678888
Q ss_pred CCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCCC
Q 007140 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP 174 (616)
Q Consensus 97 dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~~ 174 (616)
+|+ |+++ .. +.. . ....+|+++|+ +|+ .+.+..+
T Consensus 77 ~g~-L~v~-D~----------------------g~~----~----------------~~~~~i~~~d~~tg~~~~~~~~~ 112 (343)
T 2qe8_A 77 NGI-VWML-DN----------------------GNQ----S----------------KSVPKLVAWDTLNNQLSRVIYLP 112 (343)
T ss_dssp SSE-EEEE-EC----------------------HHH----H----------------TSCCEEEEEETTTTEEEEEEECC
T ss_pred CCc-EEEE-cC----------------------CCC----c----------------CCCCeEEEEECCCCeEEEEEECC
Confidence 876 4443 10 100 0 01356888888 565 3333211
Q ss_pred -------CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEE
Q 007140 175 -------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (616)
Q Consensus 175 -------~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 223 (616)
.....++++|++..++++..... ....|+++|+.+++...
T Consensus 113 ~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---------~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 113 PPITLSNSFVNDLAVDLIHNFVYISDPAPD---------DKAALIRVDLQTGLAAR 159 (343)
T ss_dssp TTTSCTTCCCCEEEEETTTTEEEEEECCSG---------GGCEEEEEETTTCCEEE
T ss_pred hhhcccccccceEEEecCCCEEEEEcCccC---------CCCeEEEEECCCCCEEE
Confidence 13357899988777777643100 02478899987554433
No 316
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.92 E-value=0.02 Score=63.18 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=49.0
Q ss_pred ceEEEEeCCC-CeeecCCCC--ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCC
Q 007140 157 AQLVLGSLDG-TAKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~~g-~~~~l~~~~--~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (616)
.+|++++++| ..+.|.... .-..++++|++.+|+++.... ...|+++++++...+.+....+
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~-----------~~~I~~~~~dG~~~~~l~~~~l---- 539 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI---- 539 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS-----------SCCEEBCCSSSCCCCEESCSSC----
T ss_pred CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC-----------CCeEEEEeCCCCCeeEEEeCCC----
Confidence 4678888866 344443322 235789999988888775321 1368888888765554432111
Q ss_pred CccccCccCCCCcceeecCCCceEEEE
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
.....+.|+|++. .|||+
T Consensus 540 --------~~PnGlavd~~~~-~LY~a 557 (699)
T 1n7d_A 540 --------QWPNGITLDLLSG-RLYWV 557 (699)
T ss_dssp --------SSCCCEEECTTTC-CEEEE
T ss_pred --------CCccEEEEeccCC-EEEEE
Confidence 0123588998876 48776
No 317
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=96.92 E-value=0.00073 Score=67.27 Aligned_cols=85 Identities=2% Similarity=-0.188 Sum_probs=55.4
Q ss_pred EEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh-hCCeEEEE-CCCCCccccCCC
Q 007140 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 495 l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la-~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
+..+++.|.+ . +.|+||++|++.+ ..++...| . .....|+ +.||.|+. ||| |+....
T Consensus 84 ~~~~~~~p~~-~-----~~p~vv~lHGgg~--------~~~~~~~~---~-~~~~~la~~~g~~vi~~D~r-~~~~~~-- 142 (326)
T 3d7r_A 84 MQVFRFNFRH-Q-----IDKKILYIHGGFN--------ALQPSPFH---W-RLLDKITLSTLYEVVLPIYP-KTPEFH-- 142 (326)
T ss_dssp EEEEEEESTT-C-----CSSEEEEECCSTT--------TSCCCHHH---H-HHHHHHHHHHCSEEEEECCC-CTTTSC--
T ss_pred EEEEEEeeCC-C-----CCeEEEEECCCcc--------cCCCCHHH---H-HHHHHHHHHhCCEEEEEeCC-CCCCCC--
Confidence 6667888876 2 2288888843210 00111111 1 2344566 56999999 999 864421
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 573 LPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 573 f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
....++|+.+++++|+++ +|++||.|-+
T Consensus 143 ------~~~~~~d~~~~~~~l~~~--~~~~~i~l~G 170 (326)
T 3d7r_A 143 ------IDDTFQAIQRVYDQLVSE--VGHQNVVVMG 170 (326)
T ss_dssp ------HHHHHHHHHHHHHHHHHH--HCGGGEEEEE
T ss_pred ------chHHHHHHHHHHHHHHhc--cCCCcEEEEE
Confidence 134689999999999987 8899998876
No 318
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=96.89 E-value=0.0071 Score=60.76 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=64.4
Q ss_pred CceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCC--CchHHHHhhCCeE
Q 007140 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARRFA 557 (616)
Q Consensus 480 ~~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~q~la~~Gy~ 557 (616)
.+.+.+++++.||..|..+.+.|....+....+.|+||++++.. ++...|.... ....+.|+++||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~-----------~~~~~~~~~~~~~~~a~~l~~~G~~ 93 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLL-----------ASATNWISNLPNNSLAFILADAGYD 93 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTT-----------CCGGGGSSSCTTTCHHHHHHHTTCE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCC-----------CchhhhhcCCCcccHHHHHHHCCCC
Confidence 36778899999999999998877543200001126677763210 1112332111 1334589999999
Q ss_pred EEE-CCCCCccccCCCc----cC-C---hhHH-HHHH-HHHHHHHHHHHcCCccCCceEEE
Q 007140 558 VLA-GPSIPIIGEGDKL----PN-D---RFVE-QLVS-SAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 558 Vl~-n~R~GS~GyG~~f----~~-~---~~g~-~~~~-D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
|+. |+| |. |+.... +. . .+.- ...+ |+.+++++++++ .+.+++.+-
T Consensus 94 vi~~D~~-G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lv 150 (377)
T 1k8q_A 94 VWLGNSR-GN-TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYV 150 (377)
T ss_dssp EEECCCT-TS-TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEE
T ss_pred EEEecCC-CC-CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEE
Confidence 999 999 73 333221 11 1 2221 2234 999999998765 223566543
No 319
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=96.87 E-value=0.0062 Score=58.73 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=62.5
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCC
Q 007140 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSI 564 (616)
Q Consensus 486 ~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~ 564 (616)
.+...||.+|+++++.|.+- +.|+||++++.. ++...| . ...+.|+++||.|+. |+|
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~------~~~~vv~~hG~~-----------~~~~~~---~-~~~~~l~~~g~~v~~~d~~- 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGT------PKALIFVSHGAG-----------EHSGRY---E-ELARMLMGLDLLVFAHDHV- 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSSC------CSEEEEEECCTT-----------CCGGGG---H-HHHHHHHHTTEEEEEECCT-
T ss_pred eEecCCCeEEEEEEeccCCC------CCeEEEEECCCC-----------chhhHH---H-HHHHHHHhCCCcEEEeCCC-
Confidence 78889999999999988741 228888883210 001122 1 456789999999999 999
Q ss_pred CccccCCCccC----ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 565 PIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 565 GS~GyG~~f~~----~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
| +|..-.. ..+ ....+|+.+.++++..+ .+.+++.+-+
T Consensus 79 G---~G~s~~~~~~~~~~-~~~~~d~~~~l~~l~~~--~~~~~~~l~G 120 (303)
T 3pe6_A 79 G---HGQSEGERMVVSDF-HVFVRDVLQHVDSMQKD--YPGLPVFLLG 120 (303)
T ss_dssp T---STTSCSSTTCCSST-HHHHHHHHHHHHHHHHH--STTCCEEEEE
T ss_pred C---CCCCCCCCCCCCCH-HHHHHHHHHHHHHHhhc--cCCceEEEEE
Confidence 6 4443221 121 34578999999998876 2345665543
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.87 E-value=0.67 Score=50.18 Aligned_cols=181 Identities=10% Similarity=0.009 Sum_probs=105.1
Q ss_pred eeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhcccccc
Q 007140 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (616)
Q Consensus 62 ~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (616)
.+|..+++++.+...+...... .....+.|.+++..|+++-.
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~---~~~~~l~~d~~~~~lywtD~----------------------------------- 56 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGV---KEASALDFDVTDNRIYWTDI----------------------------------- 56 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSC---SCEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred CcEEEEECCCCCcceEEEcCCC---CceEEEEEECCCCEEEEEEC-----------------------------------
Confidence 6899999987654332211110 01346789988888877510
Q ss_pred ccCCCcccceeEeccceEEEEeCCC-CeeecCCCC--ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC
Q 007140 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (616)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~d~~g-~~~~l~~~~--~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 218 (616)
....|++++++| ..+.+...+ ....+++.+.++.|+++... ...|++.+++|
T Consensus 57 -------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~------------~~~I~v~~~dG 111 (628)
T 4a0p_A 57 -------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG------------TNRIEVSKLDG 111 (628)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTS
T ss_pred -------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC------------CCEEEEEecCC
Confidence 124677778765 344332221 23477888888889887542 24789999988
Q ss_pred ceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecccc
Q 007140 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (616)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~ 298 (616)
+..+.+....+ ...+.+...|... .|||.... ....++..+. +|...+.+....
T Consensus 112 ~~~~~l~~~~l------------~~P~~iavdp~~G-~lY~tD~g----------~~~~I~r~~~---dG~~~~~l~~~~ 165 (628)
T 4a0p_A 112 QHRQVLVWKDL------------DSPRALALDPAEG-FMYWTEWG----------GKPKIDRAAM---DGSERTTLVPNV 165 (628)
T ss_dssp TTCEEEECSSC------------CCEEEEEEETTTT-EEEEEECS----------SSCEEEEEET---TSCSCEEEECSC
T ss_pred CcEEEEEeCCC------------CCcccEEEccCCC-eEEEeCCC----------CCCEEEEEeC---CCCceEEEECCC
Confidence 76555542111 1123566776543 37776321 1235555565 555555554433
Q ss_pred ccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 299 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 299 ~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
.....+++++++..|+..+. ....|+.+++++.
T Consensus 166 ~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGL 198 (628)
T ss_dssp SSEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred CCcceEEEccccCEEEEEEC---CCCEEEEEcCCCC
Confidence 34456778887666555432 2237999999874
No 321
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=96.82 E-value=0.0055 Score=59.38 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=65.3
Q ss_pred CceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEE
Q 007140 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (616)
Q Consensus 480 ~~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~V 558 (616)
...+.+++.+. +|.++..+ |+|.+ | |+||+.++.. + .+....|.... ...++++++||+|
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~-------~-p~vvllHG~~------~---~~~~~~w~~~~-~~~~~~~~~~~~v 69 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG-------P-HAVYLLDAFN------A---GPDVSNWVTAG-NAMNTLAGKGISV 69 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS-------S-SEEEEECCSS------C---CSSSCHHHHTS-CHHHHHTTSSSEE
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC-------C-CEEEEECCCC------C---CCChhhhhhcc-cHHHHHhcCCeEE
Confidence 36778888775 78899998 88876 1 6777773210 0 00011221100 2357889999999
Q ss_pred EE-CCCCCccccCCCccC---ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 559 LA-GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~---~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
+. |++ ++++|.. +.. +.|.....+|++..++.. .+ +|++|++|.+.
T Consensus 70 v~pd~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~i~~~--~~-~~~~~~~l~G~ 119 (280)
T 1r88_A 70 VAPAGG-AYSMYTN-WEQDGSKQWDTFLSAELPDWLAAN--RG-LAPGGHAAVGA 119 (280)
T ss_dssp EEECCC-TTSTTSB-CSSCTTCBHHHHHHTHHHHHHHHH--SC-CCSSCEEEEEE
T ss_pred EEECCC-CCCccCC-CCCCCCCcHHHHHHHHHHHHHHHH--CC-CCCCceEEEEE
Confidence 99 999 8877742 222 455444456666555431 24 68899998873
No 322
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.81 E-value=0.15 Score=50.72 Aligned_cols=68 Identities=7% Similarity=0.022 Sum_probs=36.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCc--cccccccceEEecCCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspdg~~l~~~ 104 (616)
....+.++|+|+ |.+ ...... ......|+++|+++|+..+....+.. ........+.+++++..++++
T Consensus 68 ~p~gv~~d~~g~-L~v-~D~g~~---~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 68 TVLGIKSDGNGI-VWM-LDNGNQ---SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CEEEEEECSSSE-EEE-EECHHH---HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred EeeEEEEcCCCc-EEE-EcCCCC---cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 355778999986 444 332100 01146899999998874332222111 001123577888876666554
No 323
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.77 E-value=0.13 Score=50.78 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=34.1
Q ss_pred cceEEEEeC-CCC-eeecCCCC----ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce
Q 007140 156 TAQLVLGSL-DGT-AKDFGTPA----VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (616)
Q Consensus 156 ~~~l~~~d~-~g~-~~~l~~~~----~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (616)
...|.++|+ +|+ .+.|.... .+..++|||||+.++....... ...+.-+.....+.++|..+++
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~-~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA-KESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTE
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC-cceeeccCCCcEEEEEECCCCE
Confidence 467888899 675 45554221 2335689999998876543211 0000111123467778877654
No 324
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.75 E-value=0.24 Score=47.35 Aligned_cols=119 Identities=13% Similarity=0.191 Sum_probs=63.3
Q ss_pred ceEEEEeCCCC-eeecCC---CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCC
Q 007140 157 AQLVLGSLDGT-AKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (616)
Q Consensus 157 ~~l~~~d~~g~-~~~l~~---~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (616)
..|++++.+|+ ...+.. ......++++|||+ |+++... ...|++++.+++....+.... .
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g---~ 205 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIGGEG---I 205 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEESCTT---T
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC------------CCEEEEEcCCCCEEEEEccCC---c
Confidence 35666776654 233321 12346899999987 5555332 236889998877665543210 0
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCc-eeEeccCCCCCCCCceEecccc--ccccceeecCC
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDD 309 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~l~~~~--~~~~~~~wspD 309 (616)
......+.+++||. |+.... ..+ .+.+++. ++.....+.... .....+.++||
T Consensus 206 --------~~~p~~i~~d~~G~--l~v~~~-----------~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 206 --------TNYPIGVGINSNGE--ILIADN-----------HNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp --------SCSEEEEEECTTCC--EEEEEC-----------SSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred --------cCCCcEEEECCCCC--EEEEeC-----------CCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCC
Confidence 00123577888885 544311 112 5666665 432233332211 12346788999
Q ss_pred CceEEE
Q 007140 310 SLALVN 315 (616)
Q Consensus 310 g~~l~~ 315 (616)
|..++.
T Consensus 262 g~l~vs 267 (286)
T 1q7f_A 262 GSVVLA 267 (286)
T ss_dssp TEEEEE
T ss_pred CcEEEE
Confidence 875555
No 325
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.70 E-value=0.52 Score=46.17 Aligned_cols=168 Identities=10% Similarity=0.005 Sum_probs=90.4
Q ss_pred ccceEEEEeCCCC---eeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE--EEecCCC
Q 007140 155 TTAQLVLGSLDGT---AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLP 228 (616)
Q Consensus 155 ~~~~l~~~d~~g~---~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~ 228 (616)
....|.++++++. ...+. .......++|.+....|+++.... ..|++++.+++.. ..+.. .
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~------------~~I~r~~~~g~~~~~~~~~~-~ 77 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQNVVVS-G 77 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTT------------TEEEEEETTSSSCCCEEEEE-C
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCC------------CcEEEEEccCCCceEEEEcC-C
Confidence 3467889999653 22222 112334789999888898885432 3688888876632 22211 0
Q ss_pred CCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc-ccccccceeec
Q 007140 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWC 307 (616)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~~~~~~~ws 307 (616)
+ .....+...+.+. .|||... ..+.+.+++. ++...+.+.. .......++..
T Consensus 78 l------------~~p~glavd~~~g-~ly~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavd 130 (318)
T 3sov_A 78 L------------LSPDGLACDWLGE-KLYWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALD 130 (318)
T ss_dssp C------------SCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred C------------CCccEEEEEcCCC-eEEEEEC-----------CCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEe
Confidence 0 0112345544343 4777621 1234555565 5433344432 22234456677
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
|.+..+++..+.. ..+|+++++++. ..+.+....+.. |. .++++++++.||+...
T Consensus 131 p~~g~ly~td~~~--~~~I~r~~~dG~--~~~~~~~~~l~~----Pn--glavd~~~~~lY~aD~ 185 (318)
T 3sov_A 131 PSSGFMYWTDWGE--VPKIERAGMDGS--SRFIIINSEIYW----PN--GLTLDYEEQKLYWADA 185 (318)
T ss_dssp GGGTEEEEEECSS--SCEEEEEETTSC--SCEEEECSSCSC----EE--EEEEETTTTEEEEEET
T ss_pred CCCCEEEEEecCC--CCEEEEEEcCCC--CeEEEEECCCCC----cc--EEEEeccCCEEEEEEC
Confidence 7655455444321 348999999873 334443322211 11 2788988888888863
No 326
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=96.58 E-value=0.0025 Score=61.37 Aligned_cols=51 Identities=6% Similarity=-0.136 Sum_probs=38.7
Q ss_pred hHHHH----hhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIF----LARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~l----a~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.| +++||.|+. |+| ++... .|. ...+|+.+++++++++ +|.+||.+-+
T Consensus 65 ~~~~L~~~a~~~g~~vi~~d~r-~~~~~--~~~------~~~~d~~~~~~~l~~~--~~~~~i~l~G 120 (273)
T 1vkh_A 65 LANTIKSMDTESTVCQYSIEYR-LSPEI--TNP------RNLYDAVSNITRLVKE--KGLTNINMVG 120 (273)
T ss_dssp HHHHHHHHCTTCCEEEEEECCC-CTTTS--CTT------HHHHHHHHHHHHHHHH--HTCCCEEEEE
T ss_pred HHHHHhhhhccCCcEEEEeecc-cCCCC--CCC------cHHHHHHHHHHHHHHh--CCcCcEEEEE
Confidence 34556 689999999 999 86432 122 4678999999999987 6888888765
No 327
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.51 E-value=0.028 Score=56.30 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=32.7
Q ss_pred EEEEeC-CCC-eeecC---CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc
Q 007140 159 LVLGSL-DGT-AKDFG---TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 159 l~~~d~-~g~-~~~l~---~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
+.++|+ +++ ...+. ....+..++|||||++|+..+.+ ..+.+||+...
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-------------~~v~iw~~~~~ 272 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-------------WTLHVFEIFND 272 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-------------CEEEEEESSCC
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-------------CEEEEEEccCC
Confidence 556677 453 33443 34456789999999999887653 25888888643
No 328
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.48 E-value=0.59 Score=44.31 Aligned_cols=204 Identities=8% Similarity=-0.033 Sum_probs=99.2
Q ss_pred eeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCce
Q 007140 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (616)
Q Consensus 177 ~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (616)
...+.|+||| +|++++.... .+.|.++|+.++++..-..++. . ........+++ .
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~----------~s~v~~iD~~tg~v~~~i~l~~--~-----------~fgeGi~~~g~-~ 77 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYG----------RSSVRQVALQTGKVENIHKMDD--S-----------YFGEGLTLLNE-K 77 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTT----------TCEEEEEETTTCCEEEEEECCT--T-----------CCEEEEEEETT-E
T ss_pred cccEEEeCCC-eEEEECCCCC----------CCEEEEEECCCCCEEEEEecCC--C-----------cceEEEEEeCC-E
Confidence 4588999995 6666542111 3479999998665433221110 0 01112233444 3
Q ss_pred EEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-EeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCCC
Q 007140 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (616)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (616)
||.... ..+.++++|. ++.+.. .+.- . .......++||+.++... . ...|+.+|+++.+
T Consensus 78 lyv~t~-----------~~~~v~viD~---~t~~v~~~i~~-g-~~~g~glt~Dg~~l~vs~-g---s~~l~viD~~t~~ 137 (266)
T 2iwa_A 78 LYQVVW-----------LKNIGFIYDR---RTLSNIKNFTH-Q-MKDGWGLATDGKILYGSD-G---TSILYEIDPHTFK 137 (266)
T ss_dssp EEEEET-----------TCSEEEEEET---TTTEEEEEEEC-C-SSSCCEEEECSSSEEEEC-S---SSEEEEECTTTCC
T ss_pred EEEEEe-----------cCCEEEEEEC---CCCcEEEEEEC-C-CCCeEEEEECCCEEEEEC-C---CCeEEEEECCCCc
Confidence 655421 2345666676 433322 2221 1 122345678887655433 2 2389999998842
Q ss_pred CCceEE-eecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecCCCceeeeeecC
Q 007140 336 VAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (616)
Q Consensus 336 ~~~~~l-~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (616)
..+.+ ....-.. ...+ ..+.|. +| .+|+... ....+ .++|+++++....+...
T Consensus 138 -v~~~I~Vg~~~~p-~~~~--nele~~-dg-~lyvn~~----~~~~V----------------~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 138 -LIKKHNVKYNGHR-VIRL--NELEYI-NG-EVWANIW----QTDCI----------------ARISAKDGTLLGWILLP 191 (266)
T ss_dssp -EEEEEECEETTEE-CCCE--EEEEEE-TT-EEEEEET----TSSEE----------------EEEETTTCCEEEEEECH
T ss_pred -EEEEEEECCCCcc-cccc--eeEEEE-CC-EEEEecC----CCCeE----------------EEEECCCCcEEEEEECC
Confidence 12222 1111000 0000 014555 55 5554432 12223 36899998876655432
Q ss_pred Cc---------ccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCCC
Q 007140 415 RE---------KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (616)
Q Consensus 415 ~~---------~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~~ 461 (616)
+. .....+.. ..+++++++++++.. .-+.++.+++..
T Consensus 192 g~~~~~~~~~~~~~~v~nG-------Ia~~~~~~~lfVTgk---~~~~v~~i~l~~ 237 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLNG-------IAWDQENKRIFVTGK---LWPKLFEIKLHL 237 (266)
T ss_dssp HHHHHHHHTTCTTCCCEEE-------EEEETTTTEEEEEET---TCSEEEEEEEEE
T ss_pred CcccccccccccccCceEE-------EEEcCCCCEEEEECC---CCCeEEEEEEec
Confidence 10 00012222 347788888766553 346688887653
No 329
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.40 E-value=0.58 Score=47.97 Aligned_cols=134 Identities=7% Similarity=0.049 Sum_probs=67.2
Q ss_pred ceEEEEeC-CCCe-eecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCC
Q 007140 157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAED 232 (616)
Q Consensus 157 ~~l~~~d~-~g~~-~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~ 232 (616)
..|.++|+ +++. ..+... ..+. .++++++.|+....+ ..|.+||+..+ ....+.... ...
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~~~~~~~~~~-~~~ 362 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTS--GMELKDNILVSGNAD-------------STVKIWDIKTGQCLQTLQGPN-KHQ 362 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEE--EEEEETTEEEEEETT-------------SCEEEEETTTCCEEEEECSTT-SCS
T ss_pred CeEEEEECCCCCEEEEEcCCcccEE--EEEEeCCEEEEEeCC-------------CeEEEEECCCCcEEEEEccCC-CCC
Confidence 46777787 5543 333322 2333 344467777766532 36889998654 444443210 000
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eec-----cccccccceee
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH-----KLDLRFRSVSW 306 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~-----~~~~~~~~~~w 306 (616)
.....+.|+ ++. | ... .....+.+|+. ..++.. .+. ........+.|
T Consensus 363 ---------~~v~~~~~~--~~~-l-~s~-----------~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 363 ---------SAVTCLQFN--KNF-V-ITS-----------SDDGTVKLWDL---KTGEFIRNLVTLESGGSGGVVWRIRA 415 (445)
T ss_dssp ---------SCEEEEEEC--SSE-E-EEE-----------ETTSEEEEEET---TTCCEEEEEEECTTGGGTCEEEEEEE
T ss_pred ---------CCEEEEEEC--CCE-E-EEE-----------eCCCeEEEEEC---CCCceeeeeeccccCCCCceEEEEEe
Confidence 001234443 331 2 221 12345666776 444433 231 22344667899
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
+||+..++...........|+++|.+.
T Consensus 416 s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 416 SNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred cCCEEEEEEcccCCCCccEEEEEECCC
Confidence 999887666542211234677777764
No 330
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=96.39 E-value=0.0017 Score=63.06 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=30.8
Q ss_pred ceeEEEEECCC-CcEEEEEEEcCCCCCCCCCCCCcEEEec
Q 007140 481 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWA 519 (616)
Q Consensus 481 ~~e~i~~~~~D-G~~l~g~l~~P~~~~~~kk~p~P~vv~~ 519 (616)
..+.+++.+.+ |.++..+||+|+++++.++| |+|++.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~y--Pvly~l 49 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGY--PILYML 49 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCE--EEEEES
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCC--CEEEEe
Confidence 77888998877 68999999999999987777 776555
No 331
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.36 E-value=1.5 Score=47.37 Aligned_cols=198 Identities=13% Similarity=0.076 Sum_probs=111.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.|++++.+|.++- .....|++++++++....+....-.. ..+++..+.++.|+++-.
T Consensus 38 ~~~~l~~d~~~~~lywtD---------~~~~~I~r~~~~g~~~~~v~~~g~~~----P~GlAvD~~~~~LY~tD~----- 99 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTD---------ISLKTISRAFMNGSALEHVVEFGLDY----PEGMAVDWLGKNLYWADT----- 99 (628)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCEEEECSSCSC----CCEEEEETTTTEEEEEET-----
T ss_pred ceEEEEEECCCCEEEEEE---------CCCCeEEEEECCCCCcEEEEeCCCCC----cceEEEEeCCCEEEEEEC-----
Confidence 355778999988877753 23578999999876555543222111 345666666777777410
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCC-eeecCCC--CceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~-~~~l~~~--~~~~~~~~SpDg~~ 188 (616)
...+|.+++++|. .+.|... ..-..+++.|....
T Consensus 100 -------------------------------------------~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~ 136 (628)
T 4a0p_A 100 -------------------------------------------GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGF 136 (628)
T ss_dssp -------------------------------------------TTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTE
T ss_pred -------------------------------------------CCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCe
Confidence 1357888888774 3334322 23358899998788
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|+++.... ...|++.+++|...+.+.. .+ .....+...++++ .|||+..
T Consensus 137 lY~tD~g~-----------~~~I~r~~~dG~~~~~l~~-----~~--------~~P~GlalD~~~~-~LY~aD~------ 185 (628)
T 4a0p_A 137 MYWTEWGG-----------KPKIDRAAMDGSERTTLVP-----NV--------GRANGLTIDYAKR-RLYWTDL------ 185 (628)
T ss_dssp EEEEECSS-----------SCEEEEEETTSCSCEEEEC-----SC--------SSEEEEEEETTTT-EEEEEET------
T ss_pred EEEeCCCC-----------CCEEEEEeCCCCceEEEEC-----CC--------CCcceEEEccccC-EEEEEEC------
Confidence 88885431 2379999999887666543 00 0012467777765 4888732
Q ss_pred ccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
..+.+..++. +++..+.+.........++... ..++..++. ...|+++|..++
T Consensus 186 -----~~~~I~~~d~---dG~~~~v~~~~l~~P~glav~~--~~ly~tD~~---~~~I~~~dk~tg 238 (628)
T 4a0p_A 186 -----DTNLIESSNM---LGLNREVIADDLPHPFGLTQYQ--DYIYWTDWS---RRSIERANKTSG 238 (628)
T ss_dssp -----TTTEEEEEET---TSCSCEEEEECCSCEEEEEEET--TEEEEEETT---TTEEEEEETTTC
T ss_pred -----CCCEEEEEcC---CCCceEEeeccCCCceEEEEEC--CEEEEecCC---CCEEEEEECCCC
Confidence 2235555565 5434433322211122233322 234443332 236888886553
No 332
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=96.19 E-value=0.0037 Score=59.63 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=49.6
Q ss_pred EEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCccccCCCccC
Q 007140 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEGDKLPN 575 (616)
Q Consensus 497 g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~ 575 (616)
+.||+|.+...+. .+.|+||+.|+.. ++...| . ...+.|+++||.|+. |+| || +
T Consensus 34 ~~~~~p~~~~~~g-~~~p~vv~~HG~~-----------~~~~~~---~-~~~~~l~~~G~~v~~~d~~-~s-~------- 88 (258)
T 2fx5_A 34 CRIYRPRDLGQGG-VRHPVILWGNGTG-----------AGPSTY---A-GLLSHWASHGFVVAAAETS-NA-G------- 88 (258)
T ss_dssp EEEEEESSTTGGG-CCEEEEEEECCTT-----------CCGGGG---H-HHHHHHHHHTCEEEEECCS-CC-T-------
T ss_pred EEEEeCCCCcccC-CCceEEEEECCCC-----------CCchhH---H-HHHHHHHhCCeEEEEecCC-CC-c-------
Confidence 8899998743210 1348888883310 001122 1 456789999999999 999 85 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHc---------CCccCCceEEEe
Q 007140 576 DRFVEQLVSSAEAAVEEVVRR---------GVGLPILYLNTT 608 (616)
Q Consensus 576 ~~~g~~~~~D~~~~v~~l~~~---------~~vD~~ri~~~~ 608 (616)
...|+..+++++.+. ..+|.+||++.+
T Consensus 89 ------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G 124 (258)
T 2fx5_A 89 ------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSG 124 (258)
T ss_dssp ------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHHhcccccccccccccCccceEEEE
Confidence 123455556665542 357888887765
No 333
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=96.10 E-value=0.036 Score=54.17 Aligned_cols=108 Identities=10% Similarity=-0.032 Sum_probs=59.0
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEE
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl 559 (616)
..+.+++.+. .|.++..+ +.|. + +++ |+||+.++.. ++ +....|.... ...++++++||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~-~---~~~--p~vvllHG~~------~~---~~~~~w~~~~-~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG-G---ANS--PALYLLDGLR------AQ---DDFSGWDINT-PAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC-S---TTB--CEEEEECCTT------CC---SSSCHHHHHC-CHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECCC-C---CCC--CEEEEeCCCC------CC---CCcchhhcCC-CHHHHHhcCCeEEE
Confidence 5667777765 46788766 4444 3 334 7888873210 00 0011221000 12467889999999
Q ss_pred E-CCCCCccccCCCcc---------CChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 560 A-GPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~---------~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
. |.+ ++++|..... ...|.....+|++..++... + +|++|++|.+.
T Consensus 71 ~p~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~--~-~~~~~~~l~G~ 126 (304)
T 1sfr_A 71 MPVGG-QSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANR--H-VKPTGSAVVGL 126 (304)
T ss_dssp EECCC-TTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHH--C-BCSSSEEEEEE
T ss_pred EECCC-CCccccccCCccccccccccccHHHHHHHHHHHHHHHHC--C-CCCCceEEEEE
Confidence 9 999 8877742111 12332222345554444321 3 68889988763
No 334
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=95.93 E-value=0.024 Score=53.60 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=55.6
Q ss_pred ceeEEEE-ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCC-chHHHHhhCCeEE
Q 007140 481 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAV 558 (616)
Q Consensus 481 ~~e~i~~-~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~la~~Gy~V 558 (616)
..+.+++ ++.||.+|..+.+.|.+- +.|+||++++.. ++...| .+ ...++++++||.|
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~~------~~~~vv~~HG~~-----------~~~~~~---~~~~~~~~l~~~g~~v 69 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQD------ERPTCIWLGGYR-----------SDMTGT---KALEMDDLAASLGVGA 69 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSST------TSCEEEEECCTT-----------CCTTSH---HHHHHHHHHHHHTCEE
T ss_pred CcceEEEeeccCcceEEEEeccCCCC------CCCeEEEECCCc-----------cccccc---hHHHHHHHHHhCCCcE
Confidence 5566666 677999999888776531 127788883210 001121 11 2456788999999
Q ss_pred EE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 559 LA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 559 l~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
+. |+| |...-........+ ....+|+.+.++++. .+++.+-
T Consensus 70 ~~~d~~-G~G~s~~~~~~~~~-~~~~~d~~~~~~~l~------~~~~~l~ 111 (270)
T 3llc_A 70 IRFDYS-GHGASGGAFRDGTI-SRWLEEALAVLDHFK------PEKAILV 111 (270)
T ss_dssp EEECCT-TSTTCCSCGGGCCH-HHHHHHHHHHHHHHC------CSEEEEE
T ss_pred EEeccc-cCCCCCCccccccH-HHHHHHHHHHHHHhc------cCCeEEE
Confidence 99 999 74222211111111 223566666666653 4555554
No 335
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.92 E-value=0.66 Score=43.64 Aligned_cols=109 Identities=7% Similarity=0.059 Sum_probs=64.0
Q ss_pred cceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 007140 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (616)
Q Consensus 34 ~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (616)
..+.|+ || . +|.+... .+...|.++|+++|+..+-...+... + ...-++++++|+.+..
T Consensus 46 qGL~~~-~~-~-LyestG~------~g~S~v~~vD~~Tgkv~~~~~l~~~~----F-geGit~~g~~ly~ltw------- 104 (262)
T 3nol_A 46 EGFFYR-NG-Y-FYESTGL------NGRSSIRKVDIESGKTLQQIELGKRY----F-GEGISDWKDKIVGLTW------- 104 (262)
T ss_dssp EEEEEE-TT-E-EEEEEEE------TTEEEEEEECTTTCCEEEEEECCTTC----C-EEEEEEETTEEEEEES-------
T ss_pred ceEEEE-CC-E-EEEECCC------CCCceEEEEECCCCcEEEEEecCCcc----c-eeEEEEeCCEEEEEEe-------
Confidence 677888 55 4 4555421 45679999999999864433222211 1 1223345666655410
Q ss_pred CCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeC-CCC-eeecCCCCceeeeeECCCCcEEEE
Q 007140 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLI 191 (616)
Q Consensus 114 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~-~g~-~~~l~~~~~~~~~~~SpDg~~i~~ 191 (616)
....++++|. +.+ ...+..+. ....+++||++|++
T Consensus 105 -----------------------------------------~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~ 141 (262)
T 3nol_A 105 -----------------------------------------KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIM 141 (262)
T ss_dssp -----------------------------------------SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEE
T ss_pred -----------------------------------------eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEE
Confidence 1357889998 554 44454332 23466689988776
Q ss_pred EeccCCCcccccCcccCccEEEEeCCCc
Q 007140 192 TSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (616)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 219 (616)
+. . ...|+++|.++.
T Consensus 142 Sd-G------------s~~i~~iDp~T~ 156 (262)
T 3nol_A 142 SD-G------------TPVLRFLDPESL 156 (262)
T ss_dssp CC-S------------SSEEEEECTTTC
T ss_pred EC-C------------CCeEEEEcCCCC
Confidence 63 2 236889998754
No 336
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.84 E-value=1.3 Score=42.03 Aligned_cols=191 Identities=14% Similarity=0.116 Sum_probs=98.8
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.++|||+ |.+ .. .....|++++.. ++...+...... .....+.++++|+. ++...
T Consensus 16 ~~~~i~~d~~g~-l~v-~~--------~~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l-~v~~~----- 75 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWI-TQ--------HKANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEV-WFTEN----- 75 (299)
T ss_dssp CEEEEEECTTSC-EEE-EE--------TTTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCE-EEEET-----
T ss_pred CccceEECCCCC-EEE-Ee--------cCCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCE-EEeCC-----
Confidence 467889999998 333 32 234689999988 765554321110 11446677787773 33210
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCeeecC---CCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFG---TPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~~~l~---~~~~~~~~~~SpDg~~ 188 (616)
....|++++.+++.+.+. .......+.++|||+
T Consensus 76 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~- 111 (299)
T 2z2n_A 76 -------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD- 111 (299)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC-
T ss_pred -------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC-
Confidence 013456666655443332 122445788999885
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|++.... ...|++++.++.. ..+.. +. . ......+.+.++|. |++..
T Consensus 112 l~v~~~~------------~~~i~~~d~~g~~-~~~~~-~~--~--------~~~~~~i~~~~~g~--l~v~~------- 158 (299)
T 2z2n_A 112 IWFTEMN------------GNRIGRITDDGKI-REYEL-PN--K--------GSYPSFITLGSDNA--LWFTE------- 158 (299)
T ss_dssp EEEEETT------------TTEEEEECTTCCE-EEEEC-SS--T--------TCCEEEEEECTTSC--EEEEE-------
T ss_pred EEEEecC------------CceEEEECCCCCE-EEecC-CC--C--------CCCCceEEEcCCCC--EEEEe-------
Confidence 5555332 1368888884433 33221 00 0 01122466777775 54431
Q ss_pred ccccCCCceeEeccCCCCCCCCceEec--cccccccceeecCCCceEEEeeeccCccEEEEEEeC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (616)
.....++.++. + ++...+. ........+.+.++|..++... . ...|++++.
T Consensus 159 ----~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~---~~~i~~~~~ 211 (299)
T 2z2n_A 159 ----NQNNAIGRITE---S-GDITEFKIPTPASGPVGITKGNDDALWFVEI-I---GNKIGRITT 211 (299)
T ss_dssp ----TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSSEEEEET-T---TTEEEEECT
T ss_pred ----CCCCEEEEEcC---C-CcEEEeeCCCCCCcceeEEECCCCCEEEEcc-C---CceEEEECC
Confidence 11234555553 3 3444321 1122334567888887555432 1 127899998
No 337
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=95.78 E-value=0.0071 Score=62.07 Aligned_cols=99 Identities=12% Similarity=-0.012 Sum_probs=59.4
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~ 560 (616)
..+.+.++. +|.+|+++++.| + + + +.|+||+.++. .+....| .......++++||.|+.
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~~-~-~--~--~~p~vv~~HG~-----------~~~~~~~---~~~~~~~~~~~g~~vi~ 192 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAIIS-E-D--K--AQDTLIVVGGG-----------DTSREDL---FYMLGYSGWEHDYNVLM 192 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEECC-S-S--S--CCCEEEEECCS-----------SCCHHHH---HHHTHHHHHHTTCEEEE
T ss_pred CcEEEEEeE-CCeEEEEEEEcC-C-C--C--CCCEEEEECCC-----------CCCHHHH---HHHHHHHHHhCCcEEEE
Confidence 567777776 789999998843 2 1 1 23788888321 0000111 10123367799999999
Q ss_pred -CCCCCccccCCCccC-ChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 561 -GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 561 -n~R~GS~GyG~~f~~-~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|+| |. |..-.. ..+.....+|+.+++++|..++ +||++-+
T Consensus 193 ~D~~-G~---G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G 234 (405)
T 3fnb_A 193 VDLP-GQ---GKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAG 234 (405)
T ss_dssp ECCT-TS---TTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEE
T ss_pred EcCC-CC---cCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEE
Confidence 999 74 332111 1112234788999999988765 6776654
No 338
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.62 E-value=1.5 Score=41.19 Aligned_cols=64 Identities=9% Similarity=0.197 Sum_probs=41.1
Q ss_pred eeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcE
Q 007140 22 KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTL 100 (616)
Q Consensus 22 ~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~ 100 (616)
++|.++.. ..+..+|+|++++|+.+.+ ....|+.+|+.+...+++.-... .....+++.++++.
T Consensus 20 ~~l~g~~~--~lSGla~~~~~~~L~aV~d---------~~~~I~~ld~~g~v~~~i~l~g~----~D~EGIa~~~~g~~ 83 (255)
T 3qqz_A 20 KEIAGITN--NISSLTWSAQSNTLFSTIN---------KPAAIVEMTTNGDLIRTIPLDFV----KDLETIEYIGDNQF 83 (255)
T ss_dssp EECTTCCS--CEEEEEEETTTTEEEEEEE---------TTEEEEEEETTCCEEEEEECSSC----SSEEEEEECSTTEE
T ss_pred eECCCccc--CcceeEEeCCCCEEEEEEC---------CCCeEEEEeCCCCEEEEEecCCC----CChHHeEEeCCCEE
Confidence 45544333 4889999999998777764 35889999998333444421111 11457788888863
No 339
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=95.61 E-value=0.055 Score=55.91 Aligned_cols=116 Identities=8% Similarity=-0.006 Sum_probs=62.9
Q ss_pred ceeEEEEECC--CCcE--EEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCcc--CC--C-CC--chHH
Q 007140 481 QKEMIKYQRK--DGVP--LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF--SG--M-TP--TSSL 549 (616)
Q Consensus 481 ~~e~i~~~~~--DG~~--l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~--~~--~-~~--~~~q 549 (616)
....|.|++. +|.. .-|.|+.|.+..+ +.|+|.|.++..-- ...+.+........ .. . .+ ...+
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~~----~~pvvs~~hgt~g~-~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~ 148 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPAS----PPKIFSYQVYEDAT-ALDCAPSYSYLTGLDQPNKVTAVLDTPIII 148 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCCS----SCEEEEEECCCCCC-SGGGCHHHHHBSCSCCTTGGGGSTHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCCC----CCcEEEEeCCcccC-CCCcCCccccccCCCccccchhhhhHHHHH
Confidence 5555666555 4544 8999999988543 35999998543200 00000000000000 00 0 01 2245
Q ss_pred HH-hhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc-CCccCCceEEEe
Q 007140 550 IF-LARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVGLPILYLNTT 608 (616)
Q Consensus 550 ~l-a~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~-~~vD~~ri~~~~ 608 (616)
.| +++||+|+. ||+ | .|..|..+... -.+++++++++.+. ++-...|+++.+
T Consensus 149 ~~~l~~G~~Vv~~Dy~-G---~G~~y~~~~~~---~~~vlD~vrAa~~~~~~~~~~~v~l~G 203 (462)
T 3guu_A 149 GWALQQGYYVVSSDHE-G---FKAAFIAGYEE---GMAILDGIRALKNYQNLPSDSKVALEG 203 (462)
T ss_dssp HHHHHTTCEEEEECTT-T---TTTCTTCHHHH---HHHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHhCCCEEEEecCC-C---CCCcccCCcch---hHHHHHHHHHHHHhccCCCCCCEEEEe
Confidence 56 999999999 999 6 56677764433 23455555555444 433347777754
No 340
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.36 E-value=3.8 Score=44.13 Aligned_cols=169 Identities=9% Similarity=0.005 Sum_probs=88.6
Q ss_pred ccceEEEEeCCCC---eeecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE-EEecCCCC
Q 007140 155 TTAQLVLGSLDGT---AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPP 229 (616)
Q Consensus 155 ~~~~l~~~d~~g~---~~~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~ 229 (616)
....|.++++++. ...+. .......+++++.+..|+++.... ..|+++++++... ..+....+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~------------~~I~r~~~~g~~~~~~v~~~~~ 83 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQNVVVSGL 83 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC-----CEEEECSSC
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCC------------CeEEEEEccCCCceEEEEeCCC
Confidence 4578889999653 22222 223445789999989999886432 3688888887632 22222110
Q ss_pred CCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc-ccccccceeecC
Q 007140 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCD 308 (616)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~~~~~~~wsp 308 (616)
. ...+++..+.+. .|||... ..+.+.+.+. +++..+.|.. .......++..|
T Consensus 84 ~------------~P~GlAvD~~~~-~ly~~d~-----------~~~~I~v~~~---dG~~~~~l~~~~l~~P~~Iavdp 136 (619)
T 3s94_A 84 L------------SPDGLACDWLGE-KLYWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALDP 136 (619)
T ss_dssp S------------CEEEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSCCCCEEEET
T ss_pred C------------CcCeEEEEecCC-EEEEEeC-----------CCCEEEEEEC---CCCCEEEEEeCCCCCCceEEEec
Confidence 0 012344444443 4777621 1234555565 5444444442 223345677877
Q ss_pred CCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007140 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (616)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~ 372 (616)
.+..+++.++.. ..+|+++++++. ..+.+....... |. -++.+++++.||+...
T Consensus 137 ~~g~ly~tD~g~--~~~I~r~~~dG~--~~~~l~~~~~~~----P~--Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 137 SSGFMYWTDWGE--VPKIERAGMDGS--SRFIIINSEIYW----PN--GLTLDYEEQKLYWADA 190 (619)
T ss_dssp TTTEEEEEECSS--SCEEEEEETTSC--SCEEEECSSCSS----EE--EEEEETTTTEEEEEET
T ss_pred CCCeEEEeccCC--CCEEEEEECCCC--ceEEEEeCCCCC----Cc--EEEEEccCCEEEEEeC
Confidence 654555554432 248999999873 344443322211 11 1677787888888753
No 341
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=95.29 E-value=0.051 Score=52.56 Aligned_cols=100 Identities=7% Similarity=-0.005 Sum_probs=55.5
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~ 560 (616)
..+.++++. ||..+....+.+..-++ ..|+||+.++.. ++...| . ...+.|+++||.|+.
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~p~vv~~hG~~-----------~~~~~~---~-~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPKKA----NGRTILLMHGKN-----------FCAGTW---E-RTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCSSC----CSCEEEEECCTT-----------CCGGGG---H-HHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCCCCC----CCCeEEEEcCCC-----------CcchHH---H-HHHHHHHHCCCeEEE
Confidence 677788865 77666665554433222 127777773210 001122 1 446789999999999
Q ss_pred -CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 561 -GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 561 -n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
|+| | +|..-.... .....+|+.+.+..+++. ++.+++.+-
T Consensus 79 ~d~~-G---~G~s~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 119 (315)
T 4f0j_A 79 VDQV-G---FCKSSKPAH-YQYSFQQLAANTHALLER--LGVARASVI 119 (315)
T ss_dssp ECCT-T---STTSCCCSS-CCCCHHHHHHHHHHHHHH--TTCSCEEEE
T ss_pred eecC-C---CCCCCCCCc-cccCHHHHHHHHHHHHHH--hCCCceEEE
Confidence 999 6 444322210 012356666666666655 233466543
No 342
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=95.27 E-value=0.02 Score=52.96 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=55.0
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCC
Q 007140 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPS 563 (616)
Q Consensus 485 i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R 563 (616)
+.+...+|..+ +++.|.+ + . |+||+.++.. +....|. ...+.|+++||.|+. |+|
T Consensus 5 ~~~~~~~g~~~--~~~~~~~--~---~--~~vv~~hG~~-----------~~~~~~~----~~~~~l~~~G~~v~~~d~~ 60 (238)
T 1ufo_A 5 TERLTLAGLSV--LARIPEA--P---K--ALLLALHGLQ-----------GSKEHIL----ALLPGYAERGFLLLAFDAP 60 (238)
T ss_dssp EEEEEETTEEE--EEEEESS--C---C--EEEEEECCTT-----------CCHHHHH----HTSTTTGGGTEEEEECCCT
T ss_pred ecccccCCEEE--EEEecCC--C---c--cEEEEECCCc-----------ccchHHH----HHHHHHHhCCCEEEEecCC
Confidence 34444566554 5777876 1 2 7788773210 0011221 234678899999999 999
Q ss_pred CCccccCCCccC---Ch----------hHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 564 IPIIGEGDKLPN---DR----------FVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 564 ~GS~GyG~~f~~---~~----------~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
|. |..-.. .. .-....+|+.++++++.+++. +++++-+
T Consensus 61 -g~---g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G 111 (238)
T 1ufo_A 61 -RH---GEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAG 111 (238)
T ss_dssp -TS---TTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEE
T ss_pred -CC---ccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEE
Confidence 73 333221 11 123467899999999987754 6776644
No 343
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.06 E-value=0.92 Score=44.72 Aligned_cols=40 Identities=13% Similarity=0.075 Sum_probs=26.9
Q ss_pred cceEEEEeC-CCCe-eecCCC-C-ceeeeeECCCCcEEEEEecc
Q 007140 156 TAQLVLGSL-DGTA-KDFGTP-A-VYTAVEPSPDQKYVLITSMH 195 (616)
Q Consensus 156 ~~~l~~~d~-~g~~-~~l~~~-~-~~~~~~~SpDg~~i~~~~~~ 195 (616)
...|.++|+ +|+. ..|... . .+..++|||||++|+-.+.+
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC
Confidence 457888999 6764 445422 2 33458999999998877543
No 344
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=94.80 E-value=0.13 Score=54.43 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=49.0
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~ 560 (616)
..+...++..||.+|+.... + + . |+||++++.. ++...| . ...+.|+++||.|+.
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~---g----~-~--p~vv~~HG~~-----------~~~~~~---~-~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVEL---G----S-G--PAVCLCHGFP-----------ESWYSW---R-YQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEE---C----S-S--SEEEEECCTT-----------CCGGGG---T-THHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEc---C----C-C--CEEEEEeCCC-----------CchhHH---H-HHHHHHHhCCCEEEE
Confidence 55666777779999986554 1 1 2 6677773210 111233 2 456789999999999
Q ss_pred -CCCCCccccCCCccC---ChhH-HHHHHHHHHHHHHH
Q 007140 561 -GPSIPIIGEGDKLPN---DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 561 -n~R~GS~GyG~~f~~---~~~g-~~~~~D~~~~v~~l 593 (616)
|+| | +|..-.. ..+. ....+|+.+.++++
T Consensus 291 ~D~~-G---~G~S~~~~~~~~~~~~~~~~d~~~~~~~l 324 (555)
T 3i28_A 291 MDMK-G---YGESSAPPEIEEYCMEVLCKEMVTFLDKL 324 (555)
T ss_dssp ECCT-T---STTSCCCSCGGGGSHHHHHHHHHHHHHHH
T ss_pred ecCC-C---CCCCCCCCCcccccHHHHHHHHHHHHHHc
Confidence 999 6 4554332 2332 22335555555554
No 345
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.76 E-value=0.55 Score=48.28 Aligned_cols=145 Identities=12% Similarity=0.152 Sum_probs=82.4
Q ss_pred ccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 33 ~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
...++++| ++.. +|++.. . ..|+++++++++.+.+..... ....+.|+++|+.|+++-...
T Consensus 139 P~~lavdp~~~g~-Lyv~d~--------~-~~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~~~--- 200 (430)
T 3tc9_A 139 AVWLSFDPKNHNH-LYLVGE--------Q-HPTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITNDQN--- 200 (430)
T ss_dssp CCEEEEETTEEEE-EEEEEB--------T-EEEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEECCS---
T ss_pred CCEEEECCCCCCe-EEEEeC--------C-CcEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeCCC---
Confidence 45678898 4555 444432 2 789999999887666643211 145789999999777752110
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCe---eecCCCCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~---~~l~~~~~~~~~~~SpDg~~ 188 (616)
++ ....++.++.+|.. ..+........++++|++.+
T Consensus 201 ------------------~~-----------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 201 ------------------NN-----------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp ------------------CT-----------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred ------------------Cc-----------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 00 01123333333311 12221222357889996667
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEE
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (616)
|+++... ...|++++.+++....+...+.. .....+.++|+|+ .||++
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~-~lyv~ 287 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGN-YAYIV 287 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSS-EEEEE
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCC-EEEEE
Confidence 8877543 24799999988766444322110 1123588999997 36554
No 346
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.75 E-value=2.9 Score=39.52 Aligned_cols=130 Identities=12% Similarity=0.057 Sum_probs=65.6
Q ss_pred ceEEEEeCCCCeeecCC---CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCC
Q 007140 157 AQLVLGSLDGTAKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~~g~~~~l~~---~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (616)
..|+++|.+++...+.. ......++++|+|+ |++.... ...|++++. .++...+.. +. .
T Consensus 120 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------~~~i~~~~~-~g~~~~~~~-~~--~- 181 (299)
T 2z2n_A 120 NRIGRITDDGKIREYELPNKGSYPSFITLGSDNA-LWFTENQ------------NNAIGRITE-SGDITEFKI-PT--P- 181 (299)
T ss_dssp TEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-EEEEETT------------TTEEEEECT-TCCEEEEEC-SS--T-
T ss_pred ceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCC------------CCEEEEEcC-CCcEEEeeC-CC--C-
Confidence 35666777555443321 12446788999984 5555432 236888888 444433211 00 0
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEecc--ccccccceeecCCCc
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSL 311 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~--~~~~~~~~~wspDg~ 311 (616)
......+...++|. |++. . ...+.++.++. + ++...+.. .......+.++++|.
T Consensus 182 -------~~~~~~i~~~~~g~--l~v~-~----------~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 182 -------ASGPVGITKGNDDA--LWFV-E----------IIGNKIGRITT---S-GEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp -------TCCEEEEEECTTSS--EEEE-E----------TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC
T ss_pred -------CCcceeEEECCCCC--EEEE-c----------cCCceEEEECC---C-CcEEEEECCCCCCCceeEEECCCCC
Confidence 00122456677765 5433 1 11234555553 3 34333211 122345677888887
Q ss_pred eEEEeeeccCccEEEEEEeCC
Q 007140 312 ALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~ 332 (616)
.++... . ...|++++.+
T Consensus 238 l~v~~~-~---~~~i~~~d~~ 254 (299)
T 2z2n_A 238 LWFTEW-G---ANKIGRLTSN 254 (299)
T ss_dssp EEEEET-T---TTEEEEEETT
T ss_pred EEEecc-C---CceEEEECCC
Confidence 555432 1 1268889884
No 347
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=94.62 E-value=0.04 Score=53.07 Aligned_cols=54 Identities=13% Similarity=0.030 Sum_probs=36.4
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
...+.|+++||.|+. |+| | +|..-.. ..+. ....+|+.+++++|.+. .+++.+-
T Consensus 69 ~la~~La~~Gy~Via~Dl~-G---hG~S~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~v~lv 125 (281)
T 4fbl_A 69 FLAEGFARAGYTVATPRLT-G---HGTTPAEMAASTASDWTADIVAAMRWLEER----CDVLFMT 125 (281)
T ss_dssp HHHHHHHHTTCEEEECCCT-T---SSSCHHHHHTCCHHHHHHHHHHHHHHHHHH----CSEEEEE
T ss_pred HHHHHHHHCCCEEEEECCC-C---CCCCCccccCCCHHHHHHHHHHHHHHHHhC----CCeEEEE
Confidence 457899999999999 999 6 5654221 1111 23468899999998764 2566543
No 348
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=94.53 E-value=0.023 Score=52.22 Aligned_cols=60 Identities=8% Similarity=-0.041 Sum_probs=39.0
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC---Chh-H-HHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN---DRF-V-EQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---~~~-g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.|+..||+|+. |.+ |...|+..+.. .+. + ....+.+...++.+.+++ +|++||++.+
T Consensus 41 l~~~l~~~~~~v~~P~~~-g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-i~~~ri~l~G 106 (210)
T 4h0c_A 41 LQKVLKLDEMAIYAPQAT-NNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQG-IPAEQIYFAG 106 (210)
T ss_dssp GGGTSSCTTEEEEEECCG-GGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTT-CCGGGEEEEE
T ss_pred HHHHhCCCCeEEEeecCC-CCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhC-CChhhEEEEE
Confidence 35678889999999 999 88878776664 111 1 112233333444444444 7999999876
No 349
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=94.36 E-value=0.087 Score=48.47 Aligned_cols=61 Identities=5% Similarity=-0.166 Sum_probs=35.9
Q ss_pred chHHHHhh--CCeEEEE-CCCCCcc----------------ccCCCccCChhH-HHHHHHHHHHHHHHHHcCCccCCceE
Q 007140 546 TSSLIFLA--RRFAVLA-GPSIPII----------------GEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYL 605 (616)
Q Consensus 546 ~~~q~la~--~Gy~Vl~-n~R~GS~----------------GyG~~f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~ 605 (616)
...+.|++ +||.|+. |++ |.. |+|..-...... ....+|+...++++.+ .-+|++||+
T Consensus 42 ~~~~~l~~~~~g~~v~~~d~p-~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 119 (226)
T 3cn9_A 42 PVAEALQMVLPSTRFILPQAP-SQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRA-KGIAAERII 119 (226)
T ss_dssp HHHHHHHHHCTTEEEEECCCC-EEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEE
T ss_pred HHHHHHhhcCCCcEEEeecCC-CCccccCCCCccccccccccccccccccchhHHHHHHHHHHHHHHHHH-cCCCcccEE
Confidence 34567887 9999999 988 632 333221111111 2234555555565555 247889988
Q ss_pred EEe
Q 007140 606 NTT 608 (616)
Q Consensus 606 ~~~ 608 (616)
+-+
T Consensus 120 l~G 122 (226)
T 3cn9_A 120 LAG 122 (226)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 350
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.29 E-value=2.1 Score=40.17 Aligned_cols=165 Identities=10% Similarity=0.084 Sum_probs=82.3
Q ss_pred cceEEEEeC-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCc-eEEEecCCCCCCC
Q 007140 156 TAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAED 232 (616)
Q Consensus 156 ~~~l~~~d~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~ 232 (616)
.+.|.++|+ +|++. .+.-+..+.....+++|++|+..... ...++++|.++. ....+.. +
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------------~~~v~v~D~~t~~~~~ti~~-~---- 126 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------------NGLGFVWNIRNLRQVRSFNY-D---- 126 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTCCEEEEEEC-S----
T ss_pred CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------------CCEEEEEECccCcEEEEEEC-C----
Confidence 468889999 78643 34333323333345578888888653 247999998754 4444432 1
Q ss_pred CCccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCce-Eeccc--c---ccccceee
Q 007140 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL--D---LRFRSVSW 306 (616)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~--~---~~~~~~~w 306 (616)
......++|++. | |+ . +..+.++++|. .+.+.. .+.-. . .....+.|
T Consensus 127 -----------~eG~glt~dg~~-L-~~--S---------dGs~~i~~iDp---~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 127 -----------GEGWGLTHNDQY-L-IM--S---------DGTPVLRFLDP---ESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp -----------SCCCCEEECSSC-E-EE--C---------CSSSEEEEECT---TTCSEEEEEECEETTEECCCEEEEEE
T ss_pred -----------CCceEEecCCCE-E-EE--E---------CCCCeEEEEcC---CCCeEEEEEEeccCCccccccceeEE
Confidence 112344566652 3 32 1 11345666675 333332 22211 1 11123567
Q ss_pred cCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecc-ccccc---CCCC--CCCeeeCCCCCEEEEEe
Q 007140 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVY---SDPG--SPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~---~~~g--~~~~~~s~dgk~l~~~~ 371 (616)
. ||+ ++...|.. ..|.+||++++ +.....+.. ..... ...+ -.-++++|+++++|+..
T Consensus 180 ~-~G~-lyan~w~~---~~I~vIDp~tG--~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 V-DGE-IFANVWQT---NKIVRIDPETG--KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp E-TTE-EEEEETTS---SEEEEECTTTC--BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred E-CCE-EEEEEccC---CeEEEEECCCC--cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 6 675 33333332 27999999884 322222211 10000 0000 01278888888777654
No 351
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.97 E-value=4.8 Score=38.95 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=24.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEec
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL 77 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~l 77 (616)
....+.|+|+|+. +|+.. ....|+.++.++++.+.+
T Consensus 20 ~p~~i~~d~~g~~-l~v~~---------~~~~i~~~~~~~~~~~~~ 55 (322)
T 2fp8_A 20 APNSFTFDSTNKG-FYTSV---------QDGRVIKYEGPNSGFVDF 55 (322)
T ss_dssp CCCCEECCTTCSS-EEEEC---------TTSEEEEECCTTTCEEEE
T ss_pred CceEEEEcCCCCE-EEEEc---------CCCeEEEECCCCCceEEE
Confidence 3567899999874 45442 246799999887765544
No 352
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=93.95 E-value=0.067 Score=49.68 Aligned_cols=55 Identities=13% Similarity=-0.014 Sum_probs=37.0
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccC--C-h-hHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN--D-R-FVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~--~-~-~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
...+.|+++||.|+. |+| | +|..-.. . . --....+|+.++++++.++ .+++.+-+
T Consensus 40 ~~~~~l~~~G~~v~~~d~~-g---~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~~l~G 99 (251)
T 3dkr_A 40 FMARALQRSGYGVYVPLFS-G---HGTVEPLDILTKGNPDIWWAESSAAVAHMTAK----YAKVFVFG 99 (251)
T ss_dssp HHHHHHHHTTCEEEECCCT-T---CSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT----CSEEEEEE
T ss_pred HHHHHHHHCCCEEEecCCC-C---CCCCChhhhcCcccHHHHHHHHHHHHHHHHHh----cCCeEEEE
Confidence 456789999999999 999 6 4543221 1 0 1123468899999999876 56666543
No 353
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=93.92 E-value=0.089 Score=48.30 Aligned_cols=60 Identities=8% Similarity=-0.152 Sum_probs=39.3
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC----C----hhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN----D----RFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~----~----~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.|+. ||.|+. |.+ ++.+.|..|.. + .--....+|+.+.++++.++.-+|++||++.+
T Consensus 49 ~~~~l~~-~~~vv~~d~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G 117 (223)
T 3b5e_A 49 LARRIAP-TATLVAARGR-IPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLG 117 (223)
T ss_dssp HHHHHCT-TSEEEEECCS-EEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHhcCC-CceEEEeCCC-CCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEE
Confidence 3455665 999999 987 64332333321 1 11234567888888888877447999998876
No 354
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=93.59 E-value=0.21 Score=47.05 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=45.7
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCcc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPII 567 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~ 567 (616)
..||.+|....+-|.+ . |+||+.++.. ++...| . ...+.|+++||.|+. |+| |
T Consensus 10 ~~~g~~l~~~~~g~~~------~--~~vv~~hG~~-----------~~~~~~---~-~~~~~l~~~G~~v~~~d~~-G-- 63 (286)
T 3qit_A 10 EFGGNQICLCSWGSPE------H--PVVLCIHGIL-----------EQGLAW---Q-EVALPLAAQGYRVVAPDLF-G-- 63 (286)
T ss_dssp EETTEEEEEEEESCTT------S--CEEEEECCTT-----------CCGGGG---H-HHHHHHHHTTCEEEEECCT-T--
T ss_pred ecCCceEEEeecCCCC------C--CEEEEECCCC-----------cccchH---H-HHHHHhhhcCeEEEEECCC-C--
Confidence 3489999988885422 2 5677773210 111122 1 446789999999999 999 6
Q ss_pred ccCCCccCChhHHHHHHHHHHHHHHHHHc
Q 007140 568 GEGDKLPNDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 568 GyG~~f~~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
+|..-..........+++.+.+..++++
T Consensus 64 -~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
T 3qit_A 64 -HGRSSHLEMVTSYSSLTFLAQIDRVIQE 91 (286)
T ss_dssp -STTSCCCSSGGGCSHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 4443322111112344555555555544
No 355
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.44 E-value=3.3 Score=38.99 Aligned_cols=128 Identities=9% Similarity=-0.008 Sum_probs=66.3
Q ss_pred ceEEEEeC-CCC-eeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEecCCCCCCCC
Q 007140 157 AQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~-~g~-~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~ 233 (616)
.+|.++|+ +|+ ...+ -++.+..-..+++|++|+..... ...++++|.++.+ ...+.. +
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~------------~~~v~V~D~~Tl~~~~ti~~-~----- 135 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT------------EGLLFTWSGMPPQRERTTRY-S----- 135 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS------------SCEEEEEETTTTEEEEEEEC-S-----
T ss_pred CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc------------CCEEEEEECCcCcEEEEEeC-C-----
Confidence 35888888 775 3334 22222223345578888877653 2479999987654 444432 1
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceE-ec--cccc---cccceeec
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH--KLDL---RFRSVSWC 307 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~--~~~~---~~~~~~ws 307 (616)
......++|++ .|+.. + ..+.++++|. .+.+... +. .... ....+.|.
T Consensus 136 ----------~eGwGLt~Dg~-~L~vS---d---------Gs~~l~~iDp---~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 136 ----------GEGWGLCYWNG-KLVRS---D---------GGTMLTFHEP---DGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp ----------SCCCCEEEETT-EEEEE---C---------SSSEEEEECT---TTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred ----------CceeEEecCCC-EEEEE---C---------CCCEEEEEcC---CCCeEEEEEEeCCCCcccccccccEEe
Confidence 11233456665 24322 1 1345666675 3333322 22 1111 12335566
Q ss_pred CCCceEEEeeeccCccEEEEEEeCCCC
Q 007140 308 DDSLALVNETWYKTSQTRTWLVCPGSK 334 (616)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (616)
||+ ++...|.. ..|.+||++++
T Consensus 190 -dG~-lyanvw~s---~~I~vIDp~TG 211 (268)
T 3nok_A 190 -NGV-IYANIWHS---SDVLEIDPATG 211 (268)
T ss_dssp -TTE-EEEEETTC---SEEEEECTTTC
T ss_pred -CCE-EEEEECCC---CeEEEEeCCCC
Confidence 675 33433332 27999999884
No 356
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.44 E-value=7.4 Score=39.44 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=29.0
Q ss_pred ceEEEEeC-CCCee-ecC-CCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce
Q 007140 157 AQLVLGSL-DGTAK-DFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (616)
Q Consensus 157 ~~l~~~d~-~g~~~-~l~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (616)
..|.++|+ +++.. .+. ....+..+.| +|+.|+....+ ..+.+||+..++
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~iwd~~~~~ 270 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-------------FMVKVWDPETET 270 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-------------SCEEEEEGGGTE
T ss_pred CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-------------CEEEEEECCCCc
Confidence 45667777 45432 332 2234455666 78888777543 368899987553
No 357
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=93.35 E-value=0.18 Score=45.74 Aligned_cols=60 Identities=3% Similarity=-0.114 Sum_probs=39.5
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC---------C----hhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN---------D----RFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~---------~----~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.|+ .||.|+. |.+ ++.+.|..|.. + ..-....+++.+.++.+.++.-+|++||+|.+
T Consensus 35 ~~~~l~-~~~~v~~~~~~-~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G 108 (209)
T 3og9_A 35 IAEMIA-PSHPILSIRGR-INEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIG 108 (209)
T ss_dssp HHHHHS-TTCCEEEECCS-BCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEE
T ss_pred HHHhcC-CCceEEEecCC-cCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEE
Confidence 345566 8999999 966 44443443322 1 11234667788888888777567999998876
No 358
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=93.19 E-value=0.14 Score=50.83 Aligned_cols=58 Identities=12% Similarity=-0.010 Sum_probs=37.9
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccCC------hhH-HHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPND------RFV-EQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~------~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.|+++||.|+. |+| |. |........ .+. ....+|+.+.+++|.++ .+.+++.+-+
T Consensus 85 ~~~~l~~~g~~v~~~d~~-G~-G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G 150 (354)
T 2rau_A 85 IVLYLARNGFNVYTIDYR-TH-YVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAG 150 (354)
T ss_dssp HHHHHHHTTEEEEEEECG-GG-GCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEE
T ss_pred HHHHHHhCCCEEEEecCC-CC-CCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEE
Confidence 46789999999999 999 73 332221111 222 34568999999998876 3446766543
No 359
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=93.14 E-value=0.4 Score=47.69 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=34.9
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCC
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~G 565 (616)
..||.+++.+..-|.+- +. |.||++++.. ++...| . .....|+++||.|+. |+| |
T Consensus 9 ~~~g~~l~y~~~G~~~~----~~--~~vv~~hG~~-----------~~~~~~---~-~~~~~l~~~g~~vi~~d~~-g 64 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPDQ----QG--PLVVLLHGFP-----------ESWYSW---R-HQIPALAGAGYRVVAIDQR-G 64 (356)
T ss_dssp EETTEEEEEEEECCTTC----CS--CEEEEECCTT-----------CCGGGG---T-TTHHHHHHTTCEEEEECCT-T
T ss_pred ccCCeEEEEEEecCCCC----CC--CEEEEECCCC-----------CcHHHH---H-HHHHHHHHcCCEEEEEcCC-C
Confidence 35899999888766531 12 5666663210 111233 2 346778999999999 999 6
No 360
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.10 E-value=2.1 Score=42.49 Aligned_cols=159 Identities=16% Similarity=0.071 Sum_probs=84.0
Q ss_pred eEEeecCCCCCCCCceeeecCC---C-C-CcccceEEcc--CCCeEEEEEeeccccccCCCceeEEEEECCCCceEeccc
Q 007140 7 IGIHRLLPDDSLGPEKEVHGYP---D-G-AKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (616)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~---~-~-~~~~~~~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~ 79 (616)
||+.+++. .+++.++|.-.. . . .......+.+ ||+.-.|+.+.... ....+||.++.+++..+.+..
T Consensus 85 I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~----~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 85 ILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS----SSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp EEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT----CCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC----CCeEEEEEEECCCCEEEEEec
Confidence 78777752 345666665211 1 0 0223344444 68766777765211 335678888887776666544
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceE
Q 007140 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (616)
Q Consensus 80 ~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (616)
.....++ ..+.....++|+. ++. ..... ++.. ......... .....|
T Consensus 159 ~~g~~~~-~pND~~v~~~G~f-yvt-~~~~f----------------td~~----~~~~e~~~~----------~~~g~v 205 (355)
T 3sre_A 159 IRHKLLP-SVNDIVAVGPEHF-YAT-NDHYF----------------IDPY----LKSWEMHLG----------LAWSFV 205 (355)
T ss_dssp ECCTTCS-SEEEEEEEETTEE-EEE-ESCSC----------------SSHH----HHHHHHHTT----------CCCEEE
T ss_pred cccCCCC-CCceEEEeCCCCE-Eec-CCcEe----------------CCcc----cccchhhcc----------CCccEE
Confidence 4332221 2456778888873 332 11000 0000 000000000 124678
Q ss_pred EEEeCCCCeeecCCC-CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCC
Q 007140 160 VLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (616)
Q Consensus 160 ~~~d~~g~~~~l~~~-~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (616)
|.++. ++.+.+... ..-..++|||||+.|+++... ...|++++++
T Consensus 206 yr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt~------------~~~I~~~~~~ 251 (355)
T 3sre_A 206 TYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELL------------AHKIHVYEKH 251 (355)
T ss_dssp EEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEEC
T ss_pred EEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeCC------------CCeEEEEEEC
Confidence 88887 344444322 234689999999999998653 2478888875
No 361
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.01 E-value=6.2 Score=40.31 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=37.5
Q ss_pred ccceEEccC--CCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 33 INFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 33 ~~~~~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
...+.|+|+ +..| |++.. . ..|+++++++|+...+..... ....+.|+++|+ |+++
T Consensus 141 P~gvavd~~s~~g~L-yv~D~--------~-~~I~~id~~~g~v~~~~~~~~-----~P~giavd~dG~-lyVa 198 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDL-YWVGQ--------R-DAFRHVDFVNQYVDIKTTNIG-----QCADVNFTLNGD-MVVV 198 (433)
T ss_dssp CCEEEECTTTTTCEE-EEECB--------T-SCEEEEETTTTEEEEECCCCS-----CEEEEEECTTCC-EEEE
T ss_pred CceEEEccccCCCEE-EEEeC--------C-CCEEEEECCCCEEEEeecCCC-----CccEEEECCCCC-EEEE
Confidence 456789995 4444 44432 2 789999998888766643211 145789999999 6654
No 362
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=92.89 E-value=0.031 Score=50.77 Aligned_cols=57 Identities=11% Similarity=-0.015 Sum_probs=37.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCc-hHHHHhhCCeEEEE-CCCCCc
Q 007140 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT-SSLIFLARRFAVLA-GPSIPI 566 (616)
Q Consensus 490 ~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~q~la~~Gy~Vl~-n~R~GS 566 (616)
.||.+++.+++.|.+-. . .|+||+.++.. ++...| ... ....|+++||.|+. |+| |.
T Consensus 14 ~~g~~l~~~~~~p~~~~---~--~~~vv~~hG~~-----------~~~~~~---~~~~~~~~l~~~G~~v~~~d~~-g~ 72 (210)
T 1imj_A 14 VQGQALFFREALPGSGQ---A--RFSVLLLHGIR-----------FSSETW---QNLGTLHRLAQAGYRAVAIDLP-GL 72 (210)
T ss_dssp ETTEEECEEEEECSSSC---C--SCEEEECCCTT-----------CCHHHH---HHHTHHHHHHHTTCEEEEECCT-TS
T ss_pred eCCeEEEEEEeCCCCCC---C--CceEEEECCCC-----------Ccccee---ecchhHHHHHHCCCeEEEecCC-CC
Confidence 38999999999996522 1 27788873210 001122 101 36789999999999 999 74
No 363
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.78 E-value=5.5 Score=36.91 Aligned_cols=57 Identities=9% Similarity=0.028 Sum_probs=35.1
Q ss_pred cceEEEEeC-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce-EEEe
Q 007140 156 TAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VREL 224 (616)
Q Consensus 156 ~~~l~~~d~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l 224 (616)
.+.|.++|+ +|++. .+.-+..+......+++++|+..... ...++++|.++.+ ...+
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------------~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------------NHEGFVYDLATLTPRARF 101 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------------CCEEEEEECCcCcEEEEE
Confidence 468999999 78644 33323222233344567888887653 3479999987654 3443
No 364
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=92.61 E-value=0.64 Score=48.18 Aligned_cols=81 Identities=11% Similarity=0.119 Sum_probs=46.6
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CC
Q 007140 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GP 562 (616)
Q Consensus 484 ~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~ 562 (616)
.+.+.+.||..|+.... + . . |+||++++.. ++...| . ...+.|+++||.|+. |+
T Consensus 5 ~~~~~~~dG~~l~y~~~---G----~-g--p~VV~lHG~~-----------~~~~~~---~-~l~~~La~~Gy~Vi~~D~ 59 (456)
T 3vdx_A 5 TVGQENSTSIDLYYEDH---G----T-G--VPVVLIHGFP-----------LSGHSW---E-RQSAALLDAGYRVITYDR 59 (456)
T ss_dssp EEEEETTEEEEEEEEEE---S----S-S--EEEEEECCTT-----------CCGGGG---T-THHHHHHHHTEEEEEECC
T ss_pred eecccccCCeEEEEEEe---C----C-C--CEEEEECCCC-----------CcHHHH---H-HHHHHHHHCCcEEEEECC
Confidence 35567889998874432 2 1 2 6777773210 111223 2 456789999999999 99
Q ss_pred CCCccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 563 SIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 563 R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
| | +|..-.. ..+. ....+|+.+.++++
T Consensus 60 r-G---~G~S~~~~~~~s~~~~a~dl~~~l~~l 88 (456)
T 3vdx_A 60 R-G---FGQSSQPTTGYDYDTFAADLNTVLETL 88 (456)
T ss_dssp T-T---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred C-C---CCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 9 7 4443221 2221 23456666666665
No 365
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.54 E-value=6.9 Score=36.64 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=28.9
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEe
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (616)
..+.++|+|+++.|+++.+.. ..|+.+|.+++..+.+
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~------------~~I~~ld~~g~v~~~i 64 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP------------AAIVEMTTNGDLIRTI 64 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT------------EEEEEEETTCCEEEEE
T ss_pred CcceeEEeCCCCEEEEEECCC------------CeEEEEeCCCCEEEEE
Confidence 467899999999998887653 3799999997665554
No 366
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.37 E-value=10 Score=38.27 Aligned_cols=54 Identities=17% Similarity=0.170 Sum_probs=33.5
Q ss_pred ceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 35 ~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
-..+++||++|+.... ...|.++|+.+++........... +..+.| |++.|+..
T Consensus 136 v~~~~~d~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~--~~~~l~sg 189 (435)
T 1p22_A 136 VYCLQYDDQKIVSGLR----------DNTIKIWDKNTLECKRILTGHTGS----VLCLQY--DERVIITG 189 (435)
T ss_dssp EEEEECCSSEEEEEES----------SSCEEEEESSSCCEEEEECCCSSC----EEEEEC--CSSEEEEE
T ss_pred EEEEEECCCEEEEEeC----------CCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE--CCCEEEEE
Confidence 3467889998877653 357788899888765443322212 445555 67766553
No 367
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=92.28 E-value=0.65 Score=41.89 Aligned_cols=61 Identities=5% Similarity=-0.209 Sum_probs=36.3
Q ss_pred chHHHHhh--CCeEEEE-CCCCCc----------------cccCCCccCChhH-HHHHHHHHHHHHHHHHcCCccCCceE
Q 007140 546 TSSLIFLA--RRFAVLA-GPSIPI----------------IGEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYL 605 (616)
Q Consensus 546 ~~~q~la~--~Gy~Vl~-n~R~GS----------------~GyG~~f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~ 605 (616)
...+.|++ +||.|+. |.+ |. .|+|..-...... ....+|+.+.++++.+. -+|++||+
T Consensus 32 ~~~~~l~~~~~g~~v~~~d~p-~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~ 109 (218)
T 1auo_A 32 PVAEALQESLLTTRFVLPQAP-TRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRT-GIDASRIF 109 (218)
T ss_dssp HHHHHHHTTCTTEEEEECCCC-EEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHHHHHHHHHHT-TCCGGGEE
T ss_pred HHHHHHhhcCCceEEEeCCCC-CccccCCCCCcccceecCcCCCcccccchHHHHHHHHHHHHHHHHHHHc-CCCcccEE
Confidence 44677888 9999999 976 41 1233211111111 23356666666666653 47889998
Q ss_pred EEe
Q 007140 606 NTT 608 (616)
Q Consensus 606 ~~~ 608 (616)
+.+
T Consensus 110 l~G 112 (218)
T 1auo_A 110 LAG 112 (218)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 368
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=92.00 E-value=0.22 Score=46.90 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=37.3
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccC-Chh-HHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRF-VEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~-g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
...+.|+++||.|+. |+| | +|..-.. ..+ -....+|+.++++++.++ .+++.+-+
T Consensus 58 ~~~~~l~~~G~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~i~l~G 115 (270)
T 3rm3_A 58 PLAEAYAKAGYTVCLPRLK-G---HGTHYEDMERTTFHDWVASVEEGYGWLKQR----CQTIFVTG 115 (270)
T ss_dssp HHHHHHHHTTCEEEECCCT-T---CSSCHHHHHTCCHHHHHHHHHHHHHHHHTT----CSEEEEEE
T ss_pred HHHHHHHHCCCEEEEeCCC-C---CCCCccccccCCHHHHHHHHHHHHHHHHhh----CCcEEEEE
Confidence 456789999999999 999 6 4443211 111 123478999999999876 56666543
No 369
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.00 E-value=8.1 Score=36.26 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=66.0
Q ss_pred ceEEEEeCCCCeeec--CC-CCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCC
Q 007140 157 AQLVLGSLDGTAKDF--GT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (616)
Q Consensus 157 ~~l~~~d~~g~~~~l--~~-~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (616)
..|++++.+|+...+ .. ......+.++|+|+ |++.... ...|++++.++... .+.. +. .
T Consensus 125 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~------------~~~i~~~~~~g~~~-~~~~-~~--~- 186 (300)
T 2qc5_A 125 DRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ------------NNSIGRITNTGKLE-EYPL-PT--N- 186 (300)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-EEEEETT------------TTEEEEECTTCCEE-EEEC-SS--T-
T ss_pred CeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-EEEEecC------------CCeEEEECCCCcEE-EeeC-CC--C-
Confidence 356666666654432 21 12345788999998 6665432 23688888854433 2221 00 0
Q ss_pred CccccCccCCCCcceeecCCCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEec--cccccccceeecCCCc
Q 007140 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSL 311 (616)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~--~~~~~~~~~~wspDg~ 311 (616)
......+...++|. |++.. ...+.++.++. + ++..... ........+.++++|.
T Consensus 187 -------~~~~~~i~~d~~g~--l~v~~-----------~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 187 -------AAAPVGITSGNDGA--LWFVE-----------IMGNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp -------TCCEEEEEECTTSS--EEEEE-----------TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC
T ss_pred -------CCCcceEEECCCCC--EEEEc-----------cCCCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCC
Confidence 00122456677764 54431 11234555554 3 3433321 1122344577888887
Q ss_pred eEEEeeeccCccEEEEEEeCC
Q 007140 312 ALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~ 332 (616)
.++... . ...|++++.+
T Consensus 243 l~v~~~-~---~~~i~~~~~~ 259 (300)
T 2qc5_A 243 IWFTEW-G---ANQIGRITND 259 (300)
T ss_dssp EEEEET-T---TTEEEEECTT
T ss_pred EEEecc-C---CCeEEEECCC
Confidence 555442 1 2278899884
No 370
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=91.75 E-value=0.97 Score=42.42 Aligned_cols=43 Identities=9% Similarity=0.080 Sum_probs=25.3
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
..+.|+++||.|+. |.| | +|..-.. ..+. ....+|+.+.++++
T Consensus 38 ~~~~l~~~g~~vi~~D~~-G---~G~S~~~~~~~~~~~~a~d~~~~l~~l 83 (271)
T 3ia2_A 38 QMEYLSSRGYRTIAFDRR-G---FGRSDQPWTGNDYDTFADDIAQLIEHL 83 (271)
T ss_dssp HHHHHHTTTCEEEEECCT-T---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceEEEecCC-C---CccCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 35678899999999 999 6 4543221 1111 22345555555544
No 371
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=91.65 E-value=0.68 Score=43.76 Aligned_cols=80 Identities=23% Similarity=0.317 Sum_probs=43.7
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCC
Q 007140 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 487 ~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~G 565 (616)
++..||.+|+....-|. +. |.||++++.. ++...| . ...+.|+++||.|+. |.| |
T Consensus 4 ~~~~~g~~l~y~~~g~~------~~--~~vvllHG~~-----------~~~~~w---~-~~~~~L~~~g~~vi~~D~~-G 59 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPR------DA--PVIHFHHGWP-----------LSADDW---D-AQLLFFLAHGYRVVAHDRR-G 59 (276)
T ss_dssp EECTTSCEEEEEEESCT------TS--CEEEEECCTT-----------CCGGGG---H-HHHHHHHHTTCEEEEECCT-T
T ss_pred EECCCCcEEEEEecCCC------CC--CeEEEECCCC-----------cchhHH---H-HHHHHHHhCCCEEEEecCC-C
Confidence 56779999987665442 12 4466662110 000122 1 335679999999999 999 6
Q ss_pred ccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 566 IIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 566 S~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
+|..-.. ..+. ....+|+.+.++++
T Consensus 60 ---~G~S~~~~~~~~~~~~~~d~~~~l~~l 86 (276)
T 1zoi_A 60 ---HGRSSQVWDGHDMDHYADDVAAVVAHL 86 (276)
T ss_dssp ---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 4544221 1221 12345565555554
No 372
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=91.59 E-value=0.7 Score=43.57 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=43.2
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCC
Q 007140 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 487 ~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~G 565 (616)
+++.||.+|+....-|. +. |.||+++ |.+.....+. ...+.|+++||.|+. |.| |
T Consensus 3 ~~~~~g~~l~y~~~g~~------~~--~~vvllH--------------G~~~~~~~w~-~~~~~l~~~g~~vi~~D~~-G 58 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPR------DG--LPVVFHH--------------GWPLSADDWD-NQMLFFLSHGYRVIAHDRR-G 58 (275)
T ss_dssp EECTTSCEEEEEEESCT------TS--CEEEEEC--------------CTTCCGGGGH-HHHHHHHHTTCEEEEECCT-T
T ss_pred EEccCCCEEEEEEcCCC------CC--ceEEEEC--------------CCCCchhhHH-HHHHHHHHCCceEEEEcCC-c
Confidence 56779999886665432 12 4566662 2111111101 335679999999999 999 6
Q ss_pred ccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 566 IIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 566 S~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
+|..-.. ..+. ....+|+.+.++++
T Consensus 59 ---~G~S~~~~~~~~~~~~~~dl~~~l~~l 85 (275)
T 1a88_A 59 ---HGRSDQPSTGHDMDTYAADVAALTEAL 85 (275)
T ss_dssp ---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 4543221 1121 12345555555554
No 373
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.57 E-value=9 Score=35.93 Aligned_cols=192 Identities=15% Similarity=0.099 Sum_probs=97.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (616)
....+.+++||+ |.+ .. .....|.+++.+ ++...+..... ......+.++++|+. ++...
T Consensus 21 ~p~~i~~d~~g~-l~v-~~--------~~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~l-~v~~~----- 80 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWF-TQ--------HKANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGDI-WFTEN----- 80 (300)
T ss_dssp CEEEEEECTTSC-EEE-EE--------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSCE-EEEET-----
T ss_pred CcceeeECCCCC-EEE-Ec--------CCCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCCE-EEEec-----
Confidence 456778999997 333 32 234678899987 66554421111 011345667777763 33210
Q ss_pred CCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEeccceEEEEeCCCCeeecCC---CCceeeeeECCCCcE
Q 007140 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT---PAVYTAVEPSPDQKY 188 (616)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~d~~g~~~~l~~---~~~~~~~~~SpDg~~ 188 (616)
....|+++|.+|+...+.. ......++++|+|+
T Consensus 81 -------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~- 116 (300)
T 2qc5_A 81 -------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGD- 116 (300)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTC-
T ss_pred -------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCC-
Confidence 0134666666554433221 12345788889886
Q ss_pred EEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCc
Q 007140 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (616)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (616)
|++.... ...|++++.++. ...+.. +.. ......+...++|+ |++..
T Consensus 117 l~v~~~~------------~~~i~~~~~~g~-~~~~~~-~~~----------~~~~~~i~~d~~g~--l~v~~------- 163 (300)
T 2qc5_A 117 IWFTQLN------------GDRIGKLTADGT-IYEYDL-PNK----------GSYPAFITLGSDNA--LWFTE------- 163 (300)
T ss_dssp EEEEETT------------TTEEEEECTTSC-EEEEEC-SST----------TCCEEEEEECTTSS--EEEEE-------
T ss_pred EEEEccC------------CCeEEEECCCCC-EEEccC-CCC----------CCCceeEEECCCCC--EEEEe-------
Confidence 4555332 136888888743 332211 100 00122456677775 54431
Q ss_pred ccccCCCceeEeccCCCCCCCCceEecc--ccccccceeecCCCceEEEeeeccCccEEEEEEeCC
Q 007140 269 NVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (616)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (616)
.....++.++. + ++...+.. .......+.+.++|..++.... ...|++++..
T Consensus 164 ----~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~~ 217 (300)
T 2qc5_A 164 ----NQNNSIGRITN---T-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIM----GNKIGRITTT 217 (300)
T ss_dssp ----TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETT----TTEEEEECTT
T ss_pred ----cCCCeEEEECC---C-CcEEEeeCCCCCCCcceEEECCCCCEEEEccC----CCEEEEEcCC
Confidence 11234555553 3 34333221 1123445677888875554421 1268899884
No 374
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.52 E-value=4.2 Score=38.25 Aligned_cols=67 Identities=9% Similarity=-0.078 Sum_probs=38.5
Q ss_pred CCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceE-ecccCCCccccccccceEEec
Q 007140 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVN 96 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~-~lt~~~~~~~~~~~~~~~wsp 96 (616)
+|+..+-. ++.. ...--.+++|++|..+. .....++++|+++.+.. .+.... .....++
T Consensus 84 Tgkv~~~~-l~~~--~FgeGit~~g~~Ly~lt---------w~~~~v~V~D~~Tl~~~~ti~~~~--------eGwGLt~ 143 (268)
T 3nok_A 84 SAQPVWME-RLGN--IFAEGLASDGERLYQLT---------WTEGLLFTWSGMPPQRERTTRYSG--------EGWGLCY 143 (268)
T ss_dssp CSSCSEEE-ECTT--CCEEEEEECSSCEEEEE---------SSSCEEEEEETTTTEEEEEEECSS--------CCCCEEE
T ss_pred CCcEEeEE-CCCC--cceeEEEEeCCEEEEEE---------ccCCEEEEEECCcCcEEEEEeCCC--------ceeEEec
Confidence 35544433 4442 33334677888876553 34689999999988644 332211 1233446
Q ss_pred CCcEEEEE
Q 007140 97 NSTLLIFT 104 (616)
Q Consensus 97 dg~~l~~~ 104 (616)
|+++|+.+
T Consensus 144 Dg~~L~vS 151 (268)
T 3nok_A 144 WNGKLVRS 151 (268)
T ss_dssp ETTEEEEE
T ss_pred CCCEEEEE
Confidence 78877664
No 375
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.18 E-value=1.9 Score=44.87 Aligned_cols=62 Identities=10% Similarity=0.165 Sum_probs=40.0
Q ss_pred ccceEEcc-CCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEE-------ecCCcEEEEE
Q 007140 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-------VNNSTLLIFT 104 (616)
Q Consensus 33 ~~~~~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~w-------spdg~~l~~~ 104 (616)
...++++| ++..| |++.. ....|+++|++++....+.......++ ....+.| +++|+.|++.
T Consensus 141 p~~la~dp~~~~~L-yv~~~--------~~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHL-YICYD--------GHKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEE-EEEEE--------TEEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEE-EEEEC--------CCCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEE
Confidence 34668899 46654 44432 246899999999887766543321111 1346789 9999987775
No 376
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=91.03 E-value=0.37 Score=44.07 Aligned_cols=60 Identities=10% Similarity=0.017 Sum_probs=36.3
Q ss_pred hHHHHhhCCeEEEE-CCCCCc----------------cccCCCccCChh-HHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 547 SSLIFLARRFAVLA-GPSIPI----------------IGEGDKLPNDRF-VEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS----------------~GyG~~f~~~~~-g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
..+.|+++||.|+. |.+ +. .|+......... -....+|+.+.++++.+ .-+|++|+++-+
T Consensus 42 ~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G 119 (232)
T 1fj2_A 42 AFAGIRSSHIKYICPHAP-VRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGG 119 (232)
T ss_dssp HHHTTCCTTEEEEECCCC-EEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEE
T ss_pred HHHHHhcCCcEEEecCCC-ccccccccccccccccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEE
Confidence 34667788999999 877 51 111111111111 23345777777777776 457989998765
No 377
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.89 E-value=12 Score=35.90 Aligned_cols=40 Identities=13% Similarity=0.258 Sum_probs=25.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEeccc
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~ 79 (616)
....+.++|||+ | |++... .....|+.++..+|+.+.+..
T Consensus 73 ~p~gia~~~dG~-l-~vad~~------~~~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 73 KVSGLAFTSNGD-L-VATGWN------ADSIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp EEEEEEECTTSC-E-EEEEEC------TTSCEEEEEECTTSCEEEEEE
T ss_pred CceeEEEcCCCc-E-EEEecc------CCcceEEEEcCCCCeEEEEEe
Confidence 356778999998 4 444321 123468888888888766543
No 378
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.86 E-value=20 Score=38.50 Aligned_cols=61 Identities=7% Similarity=-0.020 Sum_probs=40.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
....+++.|.+.+|.|+-- .....|++.+.++...+.+....-. ....+..+++++.|+++
T Consensus 128 ~P~~Iavdp~~g~ly~tD~--------g~~~~I~r~~~dG~~~~~l~~~~~~----~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 128 QPRAIALDPSSGFMYWTDW--------GEVPKIERAGMDGSSRFIIINSEIY----WPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp CCCCEEEETTTTEEEEEEC--------SSSCEEEEEETTSCSCEEEECSSCS----SEEEEEEETTTTEEEEE
T ss_pred CCceEEEecCCCeEEEecc--------CCCCEEEEEECCCCceEEEEeCCCC----CCcEEEEEccCCEEEEE
Confidence 4567899998888777632 1246899999987665555322111 13578888888888775
No 379
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=90.85 E-value=0.72 Score=43.43 Aligned_cols=18 Identities=17% Similarity=0.313 Sum_probs=15.8
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
..+.|+++||.|+. |.| |
T Consensus 38 ~~~~L~~~g~~vi~~D~~-G 56 (273)
T 1a8s_A 38 QMIFLAAQGYRVIAHDRR-G 56 (273)
T ss_dssp HHHHHHHTTCEEEEECCT-T
T ss_pred HHhhHhhCCcEEEEECCC-C
Confidence 35689999999999 999 6
No 380
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.52 E-value=6.4 Score=40.13 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=31.0
Q ss_pred ceEEEEeCCC-Ceeec---CCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC
Q 007140 157 AQLVLGSLDG-TAKDF---GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (616)
Q Consensus 157 ~~l~~~d~~g-~~~~l---~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 218 (616)
.+|+++++++ ....+ .....-..++|+|+|++|++.... ...|++++.++
T Consensus 248 ~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~------------~~~I~~~~~d~ 301 (430)
T 3tc9_A 248 GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN------------QHYILRSDYDW 301 (430)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------TTEEEEEEEET
T ss_pred CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC------------CCEEEEEeCCc
Confidence 4677888854 33232 121223579999999998888543 23677776553
No 381
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.48 E-value=10 Score=35.12 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=40.0
Q ss_pred CCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecC
Q 007140 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN 97 (616)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd 97 (616)
+|+..+-..++.. ...--.+++|++|.-+. -....+|++|.++.+...-...+. .....++|
T Consensus 52 tgkv~~~~~l~~~--~fgeGi~~~~~~ly~lt---------w~~~~v~v~D~~tl~~~~ti~~~~-------~Gwglt~d 113 (243)
T 3mbr_X 52 TGRILQRAEVPPP--YFGAGIVAWRDRLIQLT---------WRNHEGFVYDLATLTPRARFRYPG-------EGWALTSD 113 (243)
T ss_dssp TCCEEEEEECCTT--CCEEEEEEETTEEEEEE---------SSSSEEEEEETTTTEEEEEEECSS-------CCCEEEEC
T ss_pred CCCEEEEEeCCCC--cceeEEEEeCCEEEEEE---------eeCCEEEEEECCcCcEEEEEeCCC-------CceEEeeC
Confidence 3666554445543 33345666788866653 346899999999876443222211 22344567
Q ss_pred CcEEEEE
Q 007140 98 STLLIFT 104 (616)
Q Consensus 98 g~~l~~~ 104 (616)
+++|+.+
T Consensus 114 g~~L~vS 120 (243)
T 3mbr_X 114 DSHLYMS 120 (243)
T ss_dssp SSCEEEE
T ss_pred CCEEEEE
Confidence 8776653
No 382
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=90.37 E-value=0.36 Score=48.62 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=39.6
Q ss_pred EEEECCCCcEEEEEEEcCCC---CCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHh----hCCe-
Q 007140 485 IKYQRKDGVPLTATLYLPPG---YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF- 556 (616)
Q Consensus 485 i~~~~~DG~~l~g~l~~P~~---~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la----~~Gy- 556 (616)
.++...||.+|+...+.|.+ .++. .|.|+||++++.. ++...| . ...+.|+ ..||
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~--~~~~~vvllHG~~-----------~~~~~~---~-~~~~~L~~~~~~~G~~ 85 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRT--ATRLNLVFLHGSG-----------MSKVVW---E-YYLPRLVAADAEGNYA 85 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTT--CEEEEEEEECCTT-----------CCGGGG---G-GGGGGSCCCBTTTTEE
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCC--CCCCeEEEEcCCC-----------CcHHHH---H-HHHHHHHHhhhhcCcc
Confidence 34567899999999999876 2221 2337787773210 001123 1 3356677 4599
Q ss_pred --EEEE-CCCCC
Q 007140 557 --AVLA-GPSIP 565 (616)
Q Consensus 557 --~Vl~-n~R~G 565 (616)
.|+. |+| |
T Consensus 86 ~~~vi~~D~~-G 96 (398)
T 2y6u_A 86 IDKVLLIDQV-N 96 (398)
T ss_dssp EEEEEEECCT-T
T ss_pred eeEEEEEcCC-C
Confidence 9999 999 7
No 383
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=89.86 E-value=0.28 Score=42.79 Aligned_cols=56 Identities=2% Similarity=-0.150 Sum_probs=30.9
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
...+.|+++||.|+. |+| |. |..-..... ....+++.+.++++.+.. +.+++.+-+
T Consensus 24 ~~~~~l~~~g~~v~~~d~~-g~---g~s~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~l~G 80 (176)
T 2qjw_A 24 ALAEVAERLGWTHERPDFT-DL---DARRDLGQL-GDVRGRLQRLLEIARAAT--EKGPVVLAG 80 (176)
T ss_dssp HHHHHHHHTTCEEECCCCH-HH---HTCGGGCTT-CCHHHHHHHHHHHHHHHH--TTSCEEEEE
T ss_pred HHHHHHHHCCCEEEEeCCC-CC---CCCCCCCCC-CCHHHHHHHHHHHHHhcC--CCCCEEEEE
Confidence 345789999999999 999 73 332111000 012334444455555443 446776654
No 384
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=89.25 E-value=0.8 Score=42.88 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=27.2
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhHHHHHHHHHHHHHHHHHc
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g~~~~~D~~~~v~~l~~~ 596 (616)
..+.|+++||.|+. |+| | +|..-.. ........+|+.+.+..+++.
T Consensus 43 ~~~~l~~~g~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (279)
T 4g9e_A 43 QLEGEIGKKWRVIAPDLP-G---HGKSTDAIDPDRSYSMEGYADAMTEVMQQ 90 (279)
T ss_dssp HHHSHHHHHEEEEEECCT-T---STTSCCCSCHHHHSSHHHHHHHHHHHHHH
T ss_pred HHhHHHhcCCeEEeecCC-C---CCCCCCCCCcccCCCHHHHHHHHHHHHHH
Confidence 34556888999999 999 6 4543322 122233455555555555543
No 385
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=88.97 E-value=0.62 Score=42.44 Aligned_cols=60 Identities=10% Similarity=-0.024 Sum_probs=37.6
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCC--cc---CChh----HHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDK--LP---NDRF----VEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~--f~---~~~~----g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
...+.|+. ||.|+. ++. . .|+|.. +. .+.+ -..+.+|+.+.++++.++.-+|++||++-+
T Consensus 56 ~~~~~l~~-g~~v~~~~~d-~-~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G 125 (226)
T 2h1i_A 56 PLAEIVDS-EASVLSVRGN-V-LENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIG 125 (226)
T ss_dssp HHHHHHHT-TSCEEEECCS-E-EETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHhcc-CceEEEecCc-c-cCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEE
Confidence 34566777 999999 644 1 234422 11 1211 134566778888888887778999998865
No 386
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=88.04 E-value=1.6 Score=40.96 Aligned_cols=18 Identities=6% Similarity=-0.016 Sum_probs=15.6
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
..+.|+++||.|+. |.| |
T Consensus 38 ~~~~l~~~g~~vi~~D~~-G 56 (274)
T 1a8q_A 38 QLKAVVDAGYRGIAHDRR-G 56 (274)
T ss_dssp HHHHHHHTTCEEEEECCT-T
T ss_pred HHHHHHhCCCeEEEEcCC-C
Confidence 35678999999999 999 6
No 387
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.71 E-value=20 Score=34.36 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=35.8
Q ss_pred cceeecC-CCceEEEeeec-------------cCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEE
Q 007140 302 RSVSWCD-DSLALVNETWY-------------KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 367 (616)
Q Consensus 302 ~~~~wsp-Dg~~l~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l 367 (616)
..+.+.+ ||..++.+... ......|++++.+++ +.+.+... . ..|. -+++++||+.|
T Consensus 129 ~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~~~-~----~~p~--gia~~~dg~~l 199 (322)
T 2fp8_A 129 YAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK--ETTLLLKE-L----HVPG--GAEVSADSSFV 199 (322)
T ss_dssp EEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT--EEEEEEEE-E----SCCC--EEEECTTSSEE
T ss_pred ceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC--EEEEeccC-C----ccCc--ceEECCCCCEE
Confidence 4577888 88765554321 011257999998763 33333211 1 1111 17899999988
Q ss_pred EEEee
Q 007140 368 IAKIK 372 (616)
Q Consensus 368 ~~~~~ 372 (616)
|+...
T Consensus 200 yv~d~ 204 (322)
T 2fp8_A 200 LVAEF 204 (322)
T ss_dssp EEEEG
T ss_pred EEEeC
Confidence 88754
No 388
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=87.36 E-value=3.2 Score=39.33 Aligned_cols=57 Identities=11% Similarity=-0.032 Sum_probs=33.6
Q ss_pred HHHhhCCeEEEE-CCCCCccccCCCcc---------CChhHHHHHHHHHHHHHHHHHcCCccCCceEEEee
Q 007140 549 LIFLARRFAVLA-GPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVGLPILYLNTTA 609 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~GS~GyG~~f~---------~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~~ 609 (616)
++++++||+|+. |.+ |+++|..... ...|.....+|++..++.- .+ +|++|++|.+.
T Consensus 55 ~~l~~~~~~vv~pd~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~--~~-~~~~~~~l~G~ 121 (280)
T 1dqz_A 55 EEYYQSGLSVIMPVGG-QSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQAN--KG-VSPTGNAAVGL 121 (280)
T ss_dssp HHHTTSSSEEEEECCC-TTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHH--HC-CCSSSCEEEEE
T ss_pred HHHhcCCeEEEEECCC-CCccccCCCCCCccccccccccHHHHHHHHHHHHHHHH--cC-CCCCceEEEEE
Confidence 578889999999 999 8776643111 1122222234554444431 24 57789888763
No 389
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=87.30 E-value=5.9 Score=43.31 Aligned_cols=154 Identities=9% Similarity=-0.011 Sum_probs=84.8
Q ss_pred ceeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCC--------ceEe
Q 007140 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--------EAKP 76 (616)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g--------~~~~ 76 (616)
+.+|+.++.+ .+++.++|. ++.. ..+.++++|+.++++...-...+..-.+..|.+++++++ +.+.
T Consensus 269 ~~~~~~~~~~--~~~~~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 269 YDNYILDTKY--KNLKLQKIN-MPSD---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp EEEEEEECSS--SSCEEEECC-SCTT---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred eeEEEEcCCC--CCCcceEee-cCCc---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceE
Confidence 5678777532 345555664 4543 345678877655554321000000014577999998764 2233
Q ss_pred -cccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCcccCCCCeeeecCccccchhccccccccCCCcccceeEec
Q 007140 77 -LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (616)
Q Consensus 77 -lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (616)
++...+. .+..+.|+.+ .|++... .+ .
T Consensus 343 ~~~~~~~~----~l~~~~~~~~--~l~~~~~---------------------~~-------------------------~ 370 (711)
T 4hvt_A 343 LFTPTANE----VFNFISTTKD--RVFLATY---------------------DN-------------------------V 370 (711)
T ss_dssp EECCCTTE----EEEEEEECSS--CEEEEEE---------------------ET-------------------------T
T ss_pred EECCCCCC----eEEEEEEECC--EEEEEEE---------------------EC-------------------------C
Confidence 4322221 2557788865 3444311 00 2
Q ss_pred cceEEEEeC-CCC--eee-cCCC--CceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecC
Q 007140 156 TAQLVLGSL-DGT--AKD-FGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (616)
Q Consensus 156 ~~~l~~~d~-~g~--~~~-l~~~--~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 226 (616)
..+|+++++ +|+ .++ +..+ ..+.....++++..+++....-. .+..++++|+. ++.+.+..
T Consensus 371 ~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~---------~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSI---------VPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSS---------SCCEEEEECTT-SCEEEEEC
T ss_pred EEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCC---------CCCEEEEEeCC-CcEEEEec
Confidence 357888888 563 455 4332 24455677889888877754321 25689999988 66666655
No 390
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=87.21 E-value=2.2 Score=39.34 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=32.3
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCC
Q 007140 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSI 564 (616)
Q Consensus 486 ~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~ 564 (616)
++...||.+|+....- + . |.||++++.. ++...| . ...+.|+ +||.|+. |+|
T Consensus 6 ~~~~~~g~~l~~~~~g-------~-~--~~vv~lHG~~-----------~~~~~~---~-~~~~~l~-~~~~vi~~d~~- 58 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG-------S-G--PPVVLVGGAL-----------STRAGG---A-PLAERLA-PHFTVICYDRR- 58 (262)
T ss_dssp EEECTTSCEEEEEEEE-------C-S--SEEEEECCTT-----------CCGGGG---H-HHHHHHT-TTSEEEEECCT-
T ss_pred eEEcCCCcEEEEEEcC-------C-C--CcEEEECCCC-----------cChHHH---H-HHHHHHh-cCcEEEEEecC-
Confidence 5677899999866542 1 2 5577673210 001122 1 3456676 9999999 999
Q ss_pred C
Q 007140 565 P 565 (616)
Q Consensus 565 G 565 (616)
|
T Consensus 59 G 59 (262)
T 3r0v_A 59 G 59 (262)
T ss_dssp T
T ss_pred C
Confidence 6
No 391
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=86.33 E-value=2.5 Score=39.20 Aligned_cols=53 Identities=9% Similarity=-0.046 Sum_probs=28.9
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEE
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLN 606 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~ 606 (616)
..+.|++ ||.|+. |.| | +|..-.........++|+.+.+..+++. ++.+++.+
T Consensus 42 ~~~~L~~-~~~vi~~d~~-G---~G~s~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l 95 (278)
T 3oos_A 42 FANPFTD-HYSVYLVNLK-G---CGNSDSAKNDSEYSMTETIKDLEAIREA--LYINKWGF 95 (278)
T ss_dssp TTGGGGG-TSEEEEECCT-T---STTSCCCSSGGGGSHHHHHHHHHHHHHH--TTCSCEEE
T ss_pred HHHHhhc-CceEEEEcCC-C---CCCCCCCCCcccCcHHHHHHHHHHHHHH--hCCCeEEE
Confidence 3466776 999999 999 6 4544332111122345555555555544 13345544
No 392
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=85.80 E-value=2.1 Score=40.86 Aligned_cols=16 Identities=6% Similarity=-0.022 Sum_probs=14.7
Q ss_pred HHHhhCCeEEEE-CCCCC
Q 007140 549 LIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~G 565 (616)
..|+++||.|+. |.| |
T Consensus 45 ~~L~~~G~~vi~~D~r-G 61 (298)
T 1q0r_A 45 RRLADGGLHVIRYDHR-D 61 (298)
T ss_dssp HHHHTTTCEEEEECCT-T
T ss_pred HHHHhCCCEEEeeCCC-C
Confidence 678999999999 999 6
No 393
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=85.76 E-value=2.9 Score=39.47 Aligned_cols=22 Identities=9% Similarity=0.158 Sum_probs=17.6
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
....|+++||.|+. |.| | +|..
T Consensus 46 ~~~~l~~~g~~vi~~D~~-G---~G~S 68 (281)
T 3fob_A 46 QVPALVEAGYRVITYDRR-G---FGKS 68 (281)
T ss_dssp THHHHHHTTEEEEEECCT-T---STTS
T ss_pred HHHHHHhCCCEEEEeCCC-C---CCCC
Confidence 35678999999999 999 6 5543
No 394
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=85.65 E-value=1.6 Score=41.42 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=45.1
Q ss_pred eeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-
Q 007140 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA- 560 (616)
Q Consensus 482 ~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~- 560 (616)
.+...+...||.+|+...+-+.+ + . |.||+.++. -++...| . .....|++ ||.|+.
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~--~---~--~~vvllHG~-----------~~~~~~~---~-~~~~~L~~-~~~vi~~ 61 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI--S---R--PPVLCLPGL-----------TRNARDF---E-DLATRLAG-DWRVLCP 61 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT--T---S--CCEEEECCT-----------TCCGGGG---H-HHHHHHBB-TBCEEEE
T ss_pred cccCeeecCCCceEEEEEcCCCC--C---C--CcEEEECCC-----------CcchhhH---H-HHHHHhhc-CCEEEee
Confidence 34567788899999988775432 1 1 345555210 0000122 1 33455665 999999
Q ss_pred CCCCCccccCCCccC---ChhH-HHHHHHHHHHHHHH
Q 007140 561 GPSIPIIGEGDKLPN---DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 561 n~R~GS~GyG~~f~~---~~~g-~~~~~D~~~~v~~l 593 (616)
|.| | +|..-.. ..+. ....+|+.+.++++
T Consensus 62 Dl~-G---~G~S~~~~~~~~~~~~~~a~dl~~~l~~l 94 (285)
T 3bwx_A 62 EMR-G---RGDSDYAKDPMTYQPMQYLQDLEALLAQE 94 (285)
T ss_dssp CCT-T---BTTSCCCSSGGGCSHHHHHHHHHHHHHHH
T ss_pred cCC-C---CCCCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999 6 4543221 1221 12345555555544
No 395
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=85.04 E-value=0.43 Score=46.80 Aligned_cols=80 Identities=10% Similarity=-0.053 Sum_probs=48.1
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCc-cCCCCCchHHHHhhCCeEEEE-CCCCCccc
Q 007140 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLA-GPSIPIIG 568 (616)
Q Consensus 491 DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~G 568 (616)
++..+.+.|+.|.++..+.+ +.||++|+- -++... |. ....+.|+++||.|+. |+| |
T Consensus 12 ~~~~l~~~i~~p~~~~~~~~---~~VvllHG~-----------~~~~~~~~~---~~l~~~L~~~G~~v~~~d~~-g--- 70 (317)
T 1tca_A 12 PKSVLDAGLTCQGASPSSVS---KPILLVPGT-----------GTTGPQSFD---SNWIPLSTQLGYTPCWISPP-P--- 70 (317)
T ss_dssp CHHHHHHTEEETTBCTTSCS---SEEEEECCT-----------TCCHHHHHT---TTHHHHHHTTTCEEEEECCT-T---
T ss_pred CHHHHhheeeCCCCCCCCCC---CeEEEECCC-----------CCCcchhhH---HHHHHHHHhCCCEEEEECCC-C---
Confidence 45567777899988865443 335555221 000112 31 1345788999999999 999 6
Q ss_pred cCCCccCChhHHHHHHHHHHHHHHHHHc
Q 007140 569 EGDKLPNDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 569 yG~~f~~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
+|..-. ....+++.+.+++++++
T Consensus 71 ~g~~~~-----~~~~~~l~~~i~~~~~~ 93 (317)
T 1tca_A 71 FMLNDT-----QVNTEYMVNAITALYAG 93 (317)
T ss_dssp TTCSCH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCCcH-----HHHHHHHHHHHHHHHHH
Confidence 343211 13457788888888765
No 396
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=84.49 E-value=32 Score=33.68 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=35.9
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCcccc--ccccceEEecC---CcEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLN--AVFGSFVWVNN---STLLIF 103 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~--~~~~~~~wspd---g~~l~~ 103 (616)
....++|.|||+ | |+..+ ....|++++.++|+...+...+..... .....++++|| +..|++
T Consensus 33 ~P~~ia~~pdG~-l-lVter--------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 33 SPWGLAPLPGGD-L-LVSSR--------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp SEEEEEECTTSC-E-EEEET--------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred CceEEEEcCCCc-E-EEEEe--------cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 356789999997 3 44432 247899998777776554322211100 11346888886 445554
No 397
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=84.08 E-value=3.6 Score=41.40 Aligned_cols=80 Identities=13% Similarity=0.065 Sum_probs=45.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC---------CeEEE
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVL 559 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~---------Gy~Vl 559 (616)
..||.+|+.+...|.+-+ . |.||+. ||.+.+...+. .....|++. ||.|+
T Consensus 74 ~i~g~~i~~~~~~~~~~~----~--~plll~--------------HG~~~s~~~~~-~~~~~L~~~~~~~~~~~~~~~vi 132 (388)
T 4i19_A 74 EIDGATIHFLHVRSPEPD----A--TPMVIT--------------HGWPGTPVEFL-DIIGPLTDPRAHGGDPADAFHLV 132 (388)
T ss_dssp EETTEEEEEEEECCSSTT----C--EEEEEE--------------CCTTCCGGGGH-HHHHHHHCGGGGTSCGGGCEEEE
T ss_pred EECCeEEEEEEccCCCCC----C--CeEEEE--------------CCCCCCHHHHH-HHHHHHhCcccccCCCCCCeEEE
Confidence 348999998877765421 1 556666 23222221111 334567776 99999
Q ss_pred E-CCCCCccccCCCccC--ChhHHHHHHHHHHHHHHHHHc
Q 007140 560 A-GPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 560 ~-n~R~GS~GyG~~f~~--~~~g~~~~~D~~~~v~~l~~~ 596 (616)
. |.| | ||..-.. ..| ..+++++.+..++++
T Consensus 133 ~~dl~-G---~G~S~~~~~~~~---~~~~~a~~~~~l~~~ 165 (388)
T 4i19_A 133 IPSLP-G---FGLSGPLKSAGW---ELGRIAMAWSKLMAS 165 (388)
T ss_dssp EECCT-T---SGGGCCCSSCCC---CHHHHHHHHHHHHHH
T ss_pred EEcCC-C---CCCCCCCCCCCC---CHHHHHHHHHHHHHH
Confidence 9 999 6 4433221 233 355666666666654
No 398
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=83.99 E-value=20 Score=37.04 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=20.5
Q ss_pred eeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCC
Q 007140 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (616)
Q Consensus 178 ~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 218 (616)
..++|+|+|+.|+++... .+.|++++.++
T Consensus 313 ~~ia~~p~G~~lYvaD~~------------~h~I~kid~dg 341 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVIN------------NHYFMRSDYDE 341 (496)
T ss_dssp EEEEECTTSSEEEEEETT------------TTEEEEEEEET
T ss_pred eEEEEcCCCCEEEEEeCC------------CCEEEEEecCC
Confidence 479999999988877543 23677766543
No 399
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=83.24 E-value=1.1 Score=43.11 Aligned_cols=61 Identities=11% Similarity=-0.026 Sum_probs=37.3
Q ss_pred HHHHhhC--CeEEEE-CCC--CCccccCCCccC--------Chh----HHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 548 SLIFLAR--RFAVLA-GPS--IPIIGEGDKLPN--------DRF----VEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 548 ~q~la~~--Gy~Vl~-n~R--~GS~GyG~~f~~--------~~~----g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
.+.|+.+ ++.|+. +-. ....|+|..|-. ... -.....++.+.+++++++.-||++||++.+
T Consensus 86 ~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~G 163 (285)
T 4fhz_A 86 AEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVG 163 (285)
T ss_dssp HHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEE
Confidence 4666665 888888 521 022355655532 011 012346777778888777568999999976
No 400
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=83.21 E-value=3.5 Score=39.78 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=61.9
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCC-----CCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhC
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQ-----SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~-----~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~ 554 (616)
....+++.+. =|.+..-.||+|++|+. +|+| |||.+.++. .+....|.... ...++++..
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~--PVLYlLhG~-----------~~~~~~w~~~~-~~~~~~~~~ 78 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRI--PTVFYLSGL-----------TCTPDNASEKA-FWQFQADKY 78 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CB--CEEEEECCT-----------TCCHHHHHHHS-CHHHHHHHH
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCc--CEEEEECCC-----------CCChHHHHHhc-hHhHHHHHc
Confidence 4445566553 46788999999999863 4555 888887321 11112331111 224567788
Q ss_pred CeEEEE-CC--CCCc-----------cccCCCcc----C------ChhHHHHHHHHHHHHHHHH----HcCCccCCceEE
Q 007140 555 RFAVLA-GP--SIPI-----------IGEGDKLP----N------DRFVEQLVSSAEAAVEEVV----RRGVGLPILYLN 606 (616)
Q Consensus 555 Gy~Vl~-n~--R~GS-----------~GyG~~f~----~------~~~g~~~~~D~~~~v~~l~----~~~~vD~~ri~~ 606 (616)
|.+|+. +- | +. .|.|..|. . .+|-.--.+++...|+.-. ++...|++|.+|
T Consensus 79 ~~~~v~p~~~p~-~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i 157 (299)
T 4fol_A 79 GFAIVFPDTSPR-GDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAI 157 (299)
T ss_dssp TCEEEEECSSCC-STTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEE
T ss_pred CchhhccCCCcc-eeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEE
Confidence 999987 52 2 11 11222221 1 2344445677777776543 123567788998
Q ss_pred Eee
Q 007140 607 TTA 609 (616)
Q Consensus 607 ~~~ 609 (616)
++-
T Consensus 158 ~G~ 160 (299)
T 4fol_A 158 TGI 160 (299)
T ss_dssp EEB
T ss_pred Eec
Confidence 863
No 401
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=82.72 E-value=3.2 Score=42.43 Aligned_cols=21 Identities=14% Similarity=0.153 Sum_probs=16.1
Q ss_pred HHhhCCeEEEE-CCCCCccccCCC
Q 007140 550 IFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 550 ~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
.|+++||.|+. |.| |+ |||..
T Consensus 137 ~L~~~~~~Vi~~D~~-G~-~~G~S 158 (444)
T 2vat_A 137 AFDTSRYFIICLNYL-GS-PFGSA 158 (444)
T ss_dssp SBCTTTCEEEEECCT-TC-SSSSS
T ss_pred hhhccCCEEEEecCC-CC-CCCCC
Confidence 46689999999 999 84 45543
No 402
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=82.70 E-value=2.6 Score=39.71 Aligned_cols=49 Identities=6% Similarity=-0.128 Sum_probs=26.5
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCccC-ChhHHHHHHHHHHHHHHHHHcCCccCCceEE
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVGLPILYLN 606 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~ 606 (616)
...| ++||.|+. |.| | +|..-.. ..+ ..+++++.+..+++. ++.+++.+
T Consensus 52 ~~~l-~~~~~v~~~d~~-G---~G~s~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~l 102 (299)
T 3g9x_A 52 IPHV-APSHRCIAPDLI-G---MGKSDKPDLDY---FFDDHVRYLDAFIEA--LGLEEVVL 102 (299)
T ss_dssp HHHH-TTTSCEEEECCT-T---STTSCCCCCCC---CHHHHHHHHHHHHHH--TTCCSEEE
T ss_pred HHHH-ccCCEEEeeCCC-C---CCCCCCCCCcc---cHHHHHHHHHHHHHH--hCCCcEEE
Confidence 4556 46999999 999 6 4443222 222 344445555555443 23345544
No 403
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=81.91 E-value=7.8 Score=36.41 Aligned_cols=19 Identities=11% Similarity=-0.001 Sum_probs=15.7
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
.....|+++||.|+. |.| |
T Consensus 47 ~~~~~l~~~g~~v~~~d~~-G 66 (309)
T 3u1t_A 47 NIIPYVVAAGYRAVAPDLI-G 66 (309)
T ss_dssp TTHHHHHHTTCEEEEECCT-T
T ss_pred HHHHHHHhCCCEEEEEccC-C
Confidence 345667889999999 999 6
No 404
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=81.88 E-value=3.8 Score=37.37 Aligned_cols=24 Identities=13% Similarity=-0.092 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHcCCccCCceEEEe
Q 007140 584 SSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 584 ~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
+++...++.+.+ .-+|++||++.+
T Consensus 101 ~~l~~~~~~~~~-~~~~~~~~~l~G 124 (239)
T 3u0v_A 101 QVLTDLIDEEVK-SGIKKNRILIGG 124 (239)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEE
T ss_pred HHHHHHHHHHHH-hCCCcccEEEEE
Confidence 444444444443 347999999876
No 405
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.65 E-value=55 Score=35.36 Aligned_cols=52 Identities=6% Similarity=0.010 Sum_probs=31.7
Q ss_pred ceEEEEeC-CCCee-ecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE
Q 007140 157 AQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (616)
Q Consensus 157 ~~l~~~d~-~g~~~-~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 221 (616)
..|..+|+ +|++. ++..........++.+|..|++.+. ...++.+|+.+++.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~-------------dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTA-------------DGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECT-------------TSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECC-------------CCcEEEEECCCCce
Confidence 67999999 78533 3322221223456677777766532 23688999875543
No 406
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=81.60 E-value=4.5 Score=38.33 Aligned_cols=57 Identities=21% Similarity=0.223 Sum_probs=32.7
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccC-CCCCchHHHHhhCCeEEEE-C
Q 007140 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFS-GMTPTSSLIFLARRFAVLA-G 561 (616)
Q Consensus 484 ~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~la~~Gy~Vl~-n 561 (616)
...+...+|.+++....-|. . . |.||+++ |.+.... .+. ...+.| ++||.|+. |
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~-----~-~--~~vvllH--------------G~~~~~~~~w~-~~~~~L-~~~~~vi~~D 59 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPV-----E-G--PALFVLH--------------GGPGGNAYVLR-EGLQDY-LEGFRVVYFD 59 (286)
T ss_dssp EEEEEECSSCEEEEEEESCT-----T-S--CEEEEEC--------------CTTTCCSHHHH-HHHGGG-CTTSEEEEEC
T ss_pred ceeEEeECCEEEEEEeecCC-----C-C--CEEEEEC--------------CCCCcchhHHH-HHHHHh-cCCCEEEEEC
Confidence 34556678999987776542 1 2 4566662 2211110 001 234556 56999999 9
Q ss_pred CCCC
Q 007140 562 PSIP 565 (616)
Q Consensus 562 ~R~G 565 (616)
.| |
T Consensus 60 l~-G 62 (286)
T 2yys_A 60 QR-G 62 (286)
T ss_dssp CT-T
T ss_pred CC-C
Confidence 99 6
No 407
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=81.24 E-value=5.8 Score=37.05 Aligned_cols=58 Identities=21% Similarity=0.247 Sum_probs=33.8
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCC-CccCCCCCchHHHHhhCCeEEEE-CCC
Q 007140 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-NEFSGMTPTSSLIFLARRFAVLA-GPS 563 (616)
Q Consensus 486 ~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~la~~Gy~Vl~-n~R 563 (616)
.+.+.||.+|+....-|. + . |+||..++- ++. ..| . .....|+ ++|.|+. |.|
T Consensus 8 ~~~~~~g~~l~y~~~G~~----~--~--p~lvl~hG~------------~~~~~~w---~-~~~~~L~-~~~~vi~~D~r 62 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAA----E--K--PLLALSNSI------------GTTLHMW---D-AQLPALT-RHFRVLRYDAR 62 (266)
T ss_dssp EEECTTSCEEEEEEESCT----T--S--CEEEEECCT------------TCCGGGG---G-GGHHHHH-TTCEEEEECCT
T ss_pred EEeccCCcEEEEEecCCC----C--C--CEEEEeCCC------------ccCHHHH---H-HHHHHhh-cCcEEEEEcCC
Confidence 457789999987766431 1 1 556665210 110 123 1 3345565 4899999 999
Q ss_pred CCccccCCC
Q 007140 564 IPIIGEGDK 572 (616)
Q Consensus 564 ~GS~GyG~~ 572 (616)
| +|..
T Consensus 63 -G---~G~S 67 (266)
T 3om8_A 63 -G---HGAS 67 (266)
T ss_dssp -T---STTS
T ss_pred -C---CCCC
Confidence 6 5554
No 408
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=81.15 E-value=3.2 Score=40.76 Aligned_cols=17 Identities=6% Similarity=-0.052 Sum_probs=14.4
Q ss_pred HHHhhCCeEEEE-CCCCCc
Q 007140 549 LIFLARRFAVLA-GPSIPI 566 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~GS 566 (616)
+.|+++||.|+. |.| |-
T Consensus 79 ~~l~~~~~~vi~~D~~-G~ 96 (377)
T 3i1i_A 79 KAIDTNQYFVICTDNL-CN 96 (377)
T ss_dssp SSEETTTCEEEEECCT-TC
T ss_pred CccccccEEEEEeccc-cc
Confidence 467789999999 999 73
No 409
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=80.88 E-value=2.9 Score=40.07 Aligned_cols=18 Identities=17% Similarity=0.185 Sum_probs=13.8
Q ss_pred hHHHHhhCCeEEEE-CCCCCc
Q 007140 547 SSLIFLARRFAVLA-GPSIPI 566 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS 566 (616)
..+.|++ ||.|+. |+| |.
T Consensus 87 ~~~~L~~-~~~v~~~D~~-G~ 105 (314)
T 3kxp_A 87 LMIRLSD-RFTTIAVDQR-GH 105 (314)
T ss_dssp HHHTTTT-TSEEEEECCT-TS
T ss_pred HHHHHHc-CCeEEEEeCC-Cc
Confidence 3556666 799999 999 73
No 410
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=80.79 E-value=3.1 Score=40.32 Aligned_cols=43 Identities=21% Similarity=0.300 Sum_probs=26.2
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC-----ChhH-HHHHHHHHHHHHHH
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN-----DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-----~~~g-~~~~~D~~~~v~~l 593 (616)
....|+++||.|+. |.| | +|..-.. ..+. ....+|+.+.++.|
T Consensus 50 ~~~~L~~~g~~via~Dl~-G---~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 99 (328)
T 2cjp_A 50 QMVYLAERGYRAVAPDLR-G---YGDTTGAPLNDPSKFSILHLVGDVVALLEAI 99 (328)
T ss_dssp HHHHHHTTTCEEEEECCT-T---STTCBCCCTTCGGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcEEEEECCC-C---CCCCCCcCcCCcccccHHHHHHHHHHHHHHh
Confidence 35678889999999 999 6 5544221 2232 23345666655555
No 411
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.74 E-value=2.7 Score=44.65 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=45.1
Q ss_pred cceEEccCCCeEEEEEeeccc---cccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007140 34 NFVSWSPDGKRIAFSVRVDEE---DNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 34 ~~~~~SPDG~~iaf~~~~~~~---~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (616)
-++.|+|+|. |...-..+.. .-...+++++|+.+..+|+.+++...+.+ .++..+.|+||++.|++.
T Consensus 479 DNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---ccCcCeeECCCCCEEEEE
Confidence 4678999998 3333321100 00012568999999999999888755432 356789999999998774
No 412
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=80.68 E-value=14 Score=36.93 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=31.2
Q ss_pred ceEEEEeC-CCCeeecCCCCceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceE
Q 007140 157 AQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (616)
Q Consensus 157 ~~l~~~d~-~g~~~~l~~~~~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 221 (616)
..|+++|+ ++...++. ..++.++|||+| +++...+ ..+..++.++++.
T Consensus 146 G~L~v~dl~~~~~~~~~--~~Vs~v~WSpkG--~~vg~~d-------------g~i~~~~~~~~~~ 194 (388)
T 1xip_A 146 NDLSALDLRTKSTKQLA--QNVTSFDVTNSQ--LAVLLKD-------------RSFQSFAWRNGEM 194 (388)
T ss_dssp SEEEEEETTTCCEEEEE--ESEEEEEECSSE--EEEEETT-------------SCEEEEEEETTEE
T ss_pred CCEEEEEccCCcccccc--CCceEEEEcCCc--eEEEEcC-------------CcEEEEcCCCccc
Confidence 57888888 55555543 246789999999 3444322 2566777777663
No 413
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.51 E-value=52 Score=33.28 Aligned_cols=160 Identities=11% Similarity=0.025 Sum_probs=78.3
Q ss_pred CcceeecC-CCceEEEEEeecCCCcccccCCCceeEeccCCCCCCCCceEeccccccccceeecCCCceEEEeeeccCcc
Q 007140 245 RSISWRAD-KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (616)
Q Consensus 245 ~~~~wspd-g~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (616)
..+.|.|+ ....||+... . ..++.++. .++....+.........++|++||..++.+.......
T Consensus 142 ~gvavd~~s~~g~Lyv~D~----------~--~~I~~id~---~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~ 206 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQ----------R--DAFRHVDF---VNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTN 206 (433)
T ss_dssp CEEEECTTTTTCEEEEECB----------T--SCEEEEET---TTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTS
T ss_pred ceEEEccccCCCEEEEEeC----------C--CCEEEEEC---CCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCccc
Confidence 35788885 2234766521 0 34555565 4555555544333456788999988444443111122
Q ss_pred EEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEEecCCCCCCCcceeEeeecC
Q 007140 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 403 (616)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~ 403 (616)
..++.++..+.......+.. +..|. -+++++++..||+... ....++ +++++
T Consensus 207 ~gv~~~~~~~~~~~~~~~~~------~~~P~--giavd~~~G~lyv~d~----~~~~V~----------------~~d~~ 258 (433)
T 4hw6_A 207 TGIYLFTRASGFTERLSLCN------ARGAK--TCAVHPQNGKIYYTRY----HHAMIS----------------SYDPA 258 (433)
T ss_dssp EEEEEECGGGTTCCEEEEEE------CSSBC--CCEECTTTCCEEECBT----TCSEEE----------------EECTT
T ss_pred ceEEEEECCCCeeccccccc------cCCCC--EEEEeCCCCeEEEEEC----CCCEEE----------------EEECC
Confidence 35666665542111112211 11111 1677774445666542 122343 57777
Q ss_pred CCce-eeeeecCCcccceeeEEeecCCCcccccccCCEEEEEeecCCCCceEEEEeCC
Q 007140 404 TGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (616)
Q Consensus 404 ~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~v~~~ss~~~p~~l~~~~~~ 460 (616)
++.. +.+...... .... ...++++++++++..+. -..|++++.+
T Consensus 259 ~g~~~~~~~~~~~~---~~~~-------~ia~dpdG~~LYvad~~---~~~I~~~~~d 303 (433)
T 4hw6_A 259 TGTLTEEEVMMDTK---GSNF-------HIVWHPTGDWAYIIYNG---KHCIYRVDYN 303 (433)
T ss_dssp TCCEEEEEEECSCC---SSCE-------EEEECTTSSEEEEEETT---TTEEEEEEBC
T ss_pred CCeEEEEEeccCCC---CCcc-------cEEEeCCCCEEEEEeCC---CCEEEEEeCC
Confidence 6765 334322110 0000 13467888866555432 3467887755
No 414
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=80.30 E-value=48 Score=33.81 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=13.9
Q ss_pred ceeeeeECCC---CcEEEEEec
Q 007140 176 VYTAVEPSPD---QKYVLITSM 194 (616)
Q Consensus 176 ~~~~~~~SpD---g~~i~~~~~ 194 (616)
....++|+|| +.+|++...
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEE
T ss_pred ceeEEEECCCcCcCCEEEEEEe
Confidence 3458999997 777777754
No 415
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=80.00 E-value=6.5 Score=37.41 Aligned_cols=21 Identities=5% Similarity=-0.059 Sum_probs=15.7
Q ss_pred hHHHHhhCCeEEEE-CCCCCcccc
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGE 569 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~Gy 569 (616)
....|++ ||.|+. |+| |..|.
T Consensus 86 ~~~~L~~-g~~vi~~D~~-G~gG~ 107 (306)
T 2r11_A 86 NIADWSS-KYRTYAVDII-GDKNK 107 (306)
T ss_dssp THHHHHH-HSEEEEECCT-TSSSS
T ss_pred HHHHHhc-CCEEEEecCC-CCCCC
Confidence 3566776 999999 999 75343
No 416
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=79.98 E-value=7.4 Score=36.53 Aligned_cols=18 Identities=17% Similarity=0.196 Sum_probs=14.4
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|++ ||.|+. |.| |
T Consensus 51 ~~~~~l~~-~~~v~~~D~~-G 69 (306)
T 3r40_A 51 RVAPKLAE-RFKVIVADLP-G 69 (306)
T ss_dssp GTHHHHHT-TSEEEEECCT-T
T ss_pred HHHHHhcc-CCeEEEeCCC-C
Confidence 34566777 999999 999 6
No 417
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=79.83 E-value=4.7 Score=37.87 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=25.2
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCccCChhH-HHHHHHHHHHHHHH
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l 593 (616)
...|+++||.|+. |+| |. |..-....+. ....+|+.+.++++
T Consensus 64 ~~~l~~~g~~vi~~D~~-G~---G~s~~~~~~~~~~~~~~~~~~l~~l 107 (293)
T 3hss_A 64 VPAFLAAGYRCITFDNR-GI---GATENAEGFTTQTMVADTAALIETL 107 (293)
T ss_dssp HHHHHHTTEEEEEECCT-TS---GGGTTCCSCCHHHHHHHHHHHHHHH
T ss_pred hhhHhhcCCeEEEEccC-CC---CCCCCcccCCHHHHHHHHHHHHHhc
Confidence 5678999999999 999 74 4332222221 22345555555544
No 418
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=79.82 E-value=3.1 Score=38.48 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=18.8
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCc
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKL 573 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f 573 (616)
...+.|+++||.|+. |.| | +|..-
T Consensus 30 ~~~~~l~~~g~~v~~~D~~-G---~G~S~ 54 (267)
T 3sty_A 30 KIVALMRSSGHNVTALDLG-A---SGINP 54 (267)
T ss_dssp HHHHHHHHTTCEEEEECCT-T---STTCS
T ss_pred HHHHHHHhcCCeEEEeccc-c---CCCCC
Confidence 446789999999999 999 6 55543
No 419
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=79.73 E-value=1.7 Score=40.28 Aligned_cols=56 Identities=7% Similarity=-0.025 Sum_probs=33.6
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCC-CccC----C----hhHHHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGD-KLPN----D----RFVEQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~-~f~~----~----~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
.+.|+. +|.|+. |.. . .|+|. .|.. + ..-....+|+.+.+++++++. |.+||+|.+
T Consensus 82 ~~~l~~-~~~v~~~~~d-~-~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~i~l~G 147 (251)
T 2r8b_A 82 GARLLP-QATILSPVGD-V-SEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHY--QAGPVIGLG 147 (251)
T ss_dssp HHHHST-TSEEEEECCS-E-EETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHH--TCCSEEEEE
T ss_pred HHhcCC-CceEEEecCC-c-CCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc--CCCcEEEEE
Confidence 455665 599999 633 1 12221 1110 1 112345788888898888764 888998876
No 420
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=79.72 E-value=3.8 Score=37.77 Aligned_cols=19 Identities=21% Similarity=0.238 Sum_probs=16.2
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|+.+||.|+. |.| |
T Consensus 42 ~~~~~l~~~g~~vi~~D~~-G 61 (254)
T 2ocg_A 42 PQLKNLNKKLFTVVAWDPR-G 61 (254)
T ss_dssp HHHHHSCTTTEEEEEECCT-T
T ss_pred HHHHHHhhCCCeEEEECCC-C
Confidence 346778899999999 999 6
No 421
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=79.64 E-value=2.1 Score=42.03 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=29.3
Q ss_pred ceeEEEEECC-CCcEEEEEEEcCCCCCC-CCCCCCcEEEec
Q 007140 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQ-SKDGPLPCLFWA 519 (616)
Q Consensus 481 ~~e~i~~~~~-DG~~l~g~l~~P~~~~~-~kk~p~P~vv~~ 519 (616)
..+.+++.+. -|.+...+||+|++|++ .++| |||++.
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~y--PVlyll 49 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQSLEAY--PVVYLL 49 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCE--EEEEES
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCc--cEEEEe
Confidence 5566777765 47899999999999987 5667 888877
No 422
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=79.49 E-value=53 Score=32.79 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=20.2
Q ss_pred ceeeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCce
Q 007140 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (616)
Q Consensus 176 ~~~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (616)
.+..++| +++.|+....+ ..+.+||+.+++
T Consensus 258 ~v~~~~~--~~~~l~s~~~d-------------g~i~vwd~~~~~ 287 (435)
T 1p22_A 258 AVNVVDF--DDKYIVSASGD-------------RTIKVWNTSTCE 287 (435)
T ss_dssp CEEEEEE--ETTEEEEEETT-------------SEEEEEETTTCC
T ss_pred cEEEEEe--CCCEEEEEeCC-------------CeEEEEECCcCc
Confidence 4455666 78888877543 368899987553
No 423
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=79.13 E-value=3.2 Score=40.54 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=16.5
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
+.+.|+++||.|+. |+| |
T Consensus 88 ~~~~l~~~G~~V~~~D~~-G 106 (328)
T 1qlw_A 88 WDEYFLRKGYSTYVIDQS-G 106 (328)
T ss_dssp HHHHHHHTTCCEEEEECT-T
T ss_pred HHHHHHHCCCeEEEECCC-C
Confidence 67889999999999 999 6
No 424
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=79.06 E-value=1.6 Score=43.22 Aligned_cols=15 Identities=7% Similarity=0.089 Sum_probs=13.4
Q ss_pred HHhhCCeEEEE-CCCCC
Q 007140 550 IFLARRFAVLA-GPSIP 565 (616)
Q Consensus 550 ~la~~Gy~Vl~-n~R~G 565 (616)
.|+++||.|+. |.| |
T Consensus 93 ~L~~~g~~vi~~D~~-G 108 (377)
T 2b61_A 93 ALDTDRYFFISSNVL-G 108 (377)
T ss_dssp SEETTTCEEEEECCT-T
T ss_pred ccccCCceEEEecCC-C
Confidence 37789999999 999 8
No 425
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=78.91 E-value=5.1 Score=37.78 Aligned_cols=41 Identities=20% Similarity=0.114 Sum_probs=23.7
Q ss_pred HHHhhCCeEEEE-CCCCCccccCCCccC--ChhH-HHHHHHHHHHHHHH
Q 007140 549 LIFLARRFAVLA-GPSIPIIGEGDKLPN--DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~GS~GyG~~f~~--~~~g-~~~~~D~~~~v~~l 593 (616)
..++++||.|+. |.| | +|..-.. ..+. ....+|+.+.++.+
T Consensus 49 ~~l~~~g~~vi~~D~~-G---~G~S~~~~~~~~~~~~~~~dl~~~~~~l 93 (293)
T 1mtz_A 49 RDMTKEGITVLFYDQF-G---CGRSEEPDQSKFTIDYGVEEAEALRSKL 93 (293)
T ss_dssp GGGGGGTEEEEEECCT-T---STTSCCCCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcEEEEecCC-C---CccCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 346788999999 999 6 4543221 1122 12345555555555
No 426
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=77.16 E-value=4.9 Score=42.18 Aligned_cols=69 Identities=16% Similarity=0.180 Sum_probs=46.1
Q ss_pred ccceEEccCCCeEEEEEeecc---ccccCCCceeEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEe
Q 007140 33 INFVSWSPDGKRIAFSVRVDE---EDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (616)
Q Consensus 33 ~~~~~~SPDG~~iaf~~~~~~---~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (616)
..++.|+++|. |.|...... ......+.+++|+++..+|+.+++...+.. .+...+.||||++.|++..
T Consensus 478 PDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~---aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC---ccccCCEECCCCCEEEEEE
Confidence 44678999996 677543210 000012456899999999998887643321 2357899999999888753
No 427
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=77.10 E-value=11 Score=35.78 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=13.9
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
..+|..+||.|+. |.| |
T Consensus 56 ~~~~~~~~~~vi~~D~~-G 73 (317)
T 1wm1_A 56 RQLFDPERYKVLLFDQR-G 73 (317)
T ss_dssp GGGSCTTTEEEEEECCT-T
T ss_pred hhhccccCCeEEEECCC-C
Confidence 3456678999999 999 6
No 428
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=76.20 E-value=6.2 Score=39.91 Aligned_cols=78 Identities=12% Similarity=0.163 Sum_probs=43.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhh------CCeEEEE-CCC
Q 007140 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLA-GPS 563 (616)
Q Consensus 491 DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~------~Gy~Vl~-n~R 563 (616)
||.+|+.....+.+-+ . |.||+. ||.+.+...+. .....|++ .||.|+. |.|
T Consensus 93 ~g~~i~~~~~~~~~~~----~--~pllll--------------HG~~~s~~~~~-~~~~~L~~~~~~~~~gf~vv~~Dlp 151 (408)
T 3g02_A 93 EGLTIHFAALFSERED----A--VPIALL--------------HGWPGSFVEFY-PILQLFREEYTPETLPFHLVVPSLP 151 (408)
T ss_dssp TTEEEEEEEECCSCTT----C--EEEEEE--------------CCSSCCGGGGH-HHHHHHHHHCCTTTCCEEEEEECCT
T ss_pred CCEEEEEEEecCCCCC----C--CeEEEE--------------CCCCCcHHHHH-HHHHHHhcccccccCceEEEEECCC
Confidence 8999998888764321 2 445556 23222221111 33556777 6999999 999
Q ss_pred CCccccCCCcc---CChhHHHHHHHHHHHHHHHHHc
Q 007140 564 IPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 564 ~GS~GyG~~f~---~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
| ||..-. ...| ..+++++.+..|+++
T Consensus 152 -G---~G~S~~~~~~~~~---~~~~~a~~~~~l~~~ 180 (408)
T 3g02_A 152 -G---YTFSSGPPLDKDF---GLMDNARVVDQLMKD 180 (408)
T ss_dssp -T---STTSCCSCSSSCC---CHHHHHHHHHHHHHH
T ss_pred -C---CCCCCCCCCCCCC---CHHHHHHHHHHHHHH
Confidence 6 444322 1223 245555555555544
No 429
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=75.96 E-value=40 Score=33.14 Aligned_cols=151 Identities=9% Similarity=0.029 Sum_probs=73.5
Q ss_pred cceEEEEeCC---CCeeecC--C--CC----ceeeeeECC--CCc-EEEEEeccCCCcccccCcccCccEEEEeCCCceE
Q 007140 156 TAQLVLGSLD---GTAKDFG--T--PA----VYTAVEPSP--DQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (616)
Q Consensus 156 ~~~l~~~d~~---g~~~~l~--~--~~----~~~~~~~Sp--Dg~-~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 221 (616)
..+|+++|++ ++++.|. . .+ .-..+++.+ ||+ +|++. +..... ..-+++.++..++..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv-nh~~~~-------s~ielf~~d~~~~~~ 153 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV-NHPGSS-------STVEVFKFQEEEKSL 153 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE-ECSTTC-------CEEEEEEEETTTTEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE-ECCCCC-------CeEEEEEEECCCCEE
Confidence 5789999984 2455542 2 11 123555544 566 45444 432110 123566677777776
Q ss_pred EEecCCCCCCCCCccccCccCCCCcceeecCCCceEEEEEeecCCCccc------ccCCCceeEeccCCCCCCCCceEec
Q 007140 222 RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV------EVSPRDIIYTQPAEPAEGEKPEILH 295 (616)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~l~ 295 (616)
..+...... +. ...-+....++|. +|.....--.+... .......+|.++. ++.+.+.
T Consensus 154 ~~~~~~~g~---~~------~~pND~~v~~~G~--fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~ 217 (355)
T 3sre_A 154 LHLKTIRHK---LL------PSVNDIVAVGPEH--FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVA 217 (355)
T ss_dssp EEEEEECCT---TC------SSEEEEEEEETTE--EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEE
T ss_pred EEEeccccC---CC------CCCceEEEeCCCC--EEecCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEee
Confidence 666553211 10 0011355666765 32221100001000 0112345666553 3555444
Q ss_pred cccccccceeecCCCceEEEeeeccCccEEEEEEeCCC
Q 007140 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (616)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (616)
..-.....++||||++.++..+. ...+||+++++.
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt---~~~~I~~~~~~~ 252 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAEL---LAHKIHVYEKHA 252 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEG---GGTEEEEEEECT
T ss_pred cCCcccCcceECCCCCEEEEEeC---CCCeEEEEEECC
Confidence 33334456899999987655432 223788888764
No 430
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=75.95 E-value=2.8 Score=38.75 Aligned_cols=48 Identities=8% Similarity=-0.044 Sum_probs=29.5
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhHH-HHHHHHHHHHHHHHHcCC
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFVE-QLVSSAEAAVEEVVRRGV 598 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g~-~~~~D~~~~v~~l~~~~~ 598 (616)
..+.|+++||.|+. |.| | +|..-.. ..+.- ...+|+.+.+++|.+.++
T Consensus 35 ~~~~L~~~g~~vi~~D~~-G---hG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 85 (247)
T 1tqh_A 35 LGRFLESKGYTCHAPIYK-G---HGVPPEELVHTGPDDWWQDVMNGYEFLKNKGY 85 (247)
T ss_dssp HHHHHHHTTCEEEECCCT-T---SSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCEEEecccC-C---CCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 45678899999999 999 6 5532111 11221 234667777777766553
No 431
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=75.70 E-value=5.6 Score=36.37 Aligned_cols=19 Identities=11% Similarity=-0.008 Sum_probs=16.7
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|+++||.|+. |.| |
T Consensus 22 ~~~~~l~~~g~~vi~~D~~-G 41 (258)
T 3dqz_A 22 KLKPLLESAGHRVTAVELA-A 41 (258)
T ss_dssp THHHHHHHTTCEEEEECCT-T
T ss_pred HHHHHHHhCCCEEEEecCC-C
Confidence 456789999999999 999 6
No 432
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=75.55 E-value=5.1 Score=37.07 Aligned_cols=17 Identities=12% Similarity=0.004 Sum_probs=14.1
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
..+.|++ ||.|+. |+| |
T Consensus 47 ~~~~l~~-g~~v~~~d~~-G 64 (282)
T 3qvm_A 47 MLPELEK-QFTVIVFDYV-G 64 (282)
T ss_dssp THHHHHT-TSEEEECCCT-T
T ss_pred HHHHHhc-CceEEEEecC-C
Confidence 4567776 999999 999 6
No 433
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=75.32 E-value=7.3 Score=37.12 Aligned_cols=22 Identities=23% Similarity=0.025 Sum_probs=17.8
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
....|+++||-|+. |.| | +|+.
T Consensus 65 ~~~~L~~~g~rvia~Dl~-G---~G~S 87 (297)
T 2xt0_A 65 MLPVFTAAGGRVVAPDLF-G---FGRS 87 (297)
T ss_dssp THHHHHHTTCEEEEECCT-T---STTS
T ss_pred HHHHHHhCCcEEEEeCCC-C---CCCC
Confidence 45779999999999 999 5 5654
No 434
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=75.32 E-value=7 Score=37.57 Aligned_cols=22 Identities=18% Similarity=0.049 Sum_probs=17.9
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
....|+++||-|+. |.| | +|..
T Consensus 66 ~~~~L~~~g~rvia~Dl~-G---~G~S 88 (310)
T 1b6g_A 66 MIPVFAESGARVIAPDFF-G---FGKS 88 (310)
T ss_dssp THHHHHHTTCEEEEECCT-T---STTS
T ss_pred HHHHHHhCCCeEEEeCCC-C---CCCC
Confidence 45679999999999 999 5 5654
No 435
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=75.29 E-value=64 Score=31.51 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=35.4
Q ss_pred ceeeeeECCC---CcEEEEEecc-CCCcccccCcccCccEEEEeCCCc-----eEEE-ecCCCCCCCCCccccCccCCCC
Q 007140 176 VYTAVEPSPD---QKYVLITSMH-RPYSYKVPCARFSQKVQVWTTDGK-----LVRE-LCDLPPAEDIPVCYNSVREGMR 245 (616)
Q Consensus 176 ~~~~~~~SpD---g~~i~~~~~~-~~~~~~~~~~~~~~~l~~~d~~~~-----~~~~-l~~~~~~~~~~~~~~~~~~~~~ 245 (616)
....++++|| +.+|++.... .... .....|++++.+++ ..+. ++.++.. ......
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~------~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~---------~~h~~~ 138 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGG------HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGA---------YIHNGG 138 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGG------CEEEEEEEEEECSSSCCEEEEEEEEEEEECC---------SSCCCC
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCC------CcceEEEEEEECCCCcCcCccEEEEEcCCCC---------CCcCCc
Confidence 3468999998 6777766432 1000 00136778877654 1222 2322210 011123
Q ss_pred cceeecCCCceEEEE
Q 007140 246 SISWRADKPSTLYWV 260 (616)
Q Consensus 246 ~~~wspdg~~~l~~~ 260 (616)
.+.+.|||. ||+.
T Consensus 139 ~l~~~pDG~--Lyvt 151 (354)
T 3a9g_A 139 RIRFGPDGM--LYIT 151 (354)
T ss_dssp CEEECTTSC--EEEE
T ss_pred eEEECCCCc--EEEE
Confidence 588999996 6554
No 436
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=75.05 E-value=4.9 Score=37.53 Aligned_cols=23 Identities=17% Similarity=0.078 Sum_probs=18.0
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
.....|+++||.|+. |.| | +|..
T Consensus 28 ~~~~~L~~~g~~via~Dl~-G---~G~S 51 (264)
T 2wfl_A 28 KLKPLLESAGHKVTAVDLS-A---AGIN 51 (264)
T ss_dssp THHHHHHHTTCEEEEECCT-T---STTC
T ss_pred HHHHHHHhCCCEEEEeecC-C---CCCC
Confidence 345678899999999 999 6 4543
No 437
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=74.91 E-value=5.1 Score=35.15 Aligned_cols=19 Identities=16% Similarity=-0.032 Sum_probs=15.9
Q ss_pred hHHHHhhC-CeEEEE-CCCCCc
Q 007140 547 SSLIFLAR-RFAVLA-GPSIPI 566 (616)
Q Consensus 547 ~~q~la~~-Gy~Vl~-n~R~GS 566 (616)
..+.|+++ ||.|+. |+| |.
T Consensus 27 ~~~~l~~~~g~~vi~~d~~-g~ 47 (194)
T 2qs9_A 27 VKKELEKIPGFQCLAKNMP-DP 47 (194)
T ss_dssp HHHHHTTSTTCCEEECCCS-ST
T ss_pred HHHHHhhccCceEEEeeCC-CC
Confidence 45678888 999999 999 84
No 438
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=74.82 E-value=16 Score=34.14 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=14.8
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|+++ |.|+. |.| |
T Consensus 48 ~~~~~L~~~-~~vi~~D~~-G 66 (301)
T 3kda_A 48 QLMPELAKR-FTVIAPDLP-G 66 (301)
T ss_dssp TTHHHHTTT-SEEEEECCT-T
T ss_pred HHHHHHHhc-CeEEEEcCC-C
Confidence 346778888 99999 999 6
No 439
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=74.19 E-value=9.3 Score=36.33 Aligned_cols=21 Identities=5% Similarity=0.158 Sum_probs=15.7
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
..+|..+||.|+. |.| | +|+.
T Consensus 53 ~~~~~~~~~~vi~~D~~-G---~G~S 74 (313)
T 1azw_A 53 RRFHDPAKYRIVLFDQR-G---SGRS 74 (313)
T ss_dssp GGGSCTTTEEEEEECCT-T---STTS
T ss_pred HHhcCcCcceEEEECCC-C---CcCC
Confidence 3456678999999 999 6 4554
No 440
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=73.92 E-value=2 Score=40.61 Aligned_cols=18 Identities=11% Similarity=-0.149 Sum_probs=14.2
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
.....|+. ||.|+. |+| |
T Consensus 69 ~l~~~L~~-~~~v~~~D~~-G 87 (280)
T 3qmv_A 69 GWQERLGD-EVAVVPVQLP-G 87 (280)
T ss_dssp THHHHHCT-TEEEEECCCT-T
T ss_pred HHHHhcCC-CceEEEEeCC-C
Confidence 34566766 999999 999 6
No 441
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=73.57 E-value=3.6 Score=39.15 Aligned_cols=45 Identities=11% Similarity=-0.047 Sum_probs=30.8
Q ss_pred chHHHHhhC--CeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcC
Q 007140 546 TSSLIFLAR--RFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG 597 (616)
Q Consensus 546 ~~~q~la~~--Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~ 597 (616)
...+.|+++ ||.|+. |+| |. |..... . ....+|+.+.+..+++..
T Consensus 54 ~~~~~L~~~~~g~~vi~~D~~-G~---G~s~~~--~-~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 54 HLLEYINETHPGTVVTVLDLF-DG---RESLRP--L-WEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp HHHHHHHHHSTTCCEEECCSS-CS---GGGGSC--H-HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCcEEEEeccC-CC---ccchhh--H-HHHHHHHHHHHHHHhhcC
Confidence 446789998 999999 999 74 443222 1 146777777777777654
No 442
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=72.40 E-value=4.6 Score=37.89 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=26.4
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
...+.|+++||.|+. |.| | +|+.-.. ..+. ....+|+.+.+++|
T Consensus 41 ~~~~~L~~~g~~vi~~D~~-G---~G~S~~~~~~~~~~~~a~dl~~~l~~l 87 (277)
T 1brt_A 41 RQSAALLDAGYRVITYDRR-G---FGQSSQPTTGYDYDTFAADLNTVLETL 87 (277)
T ss_dssp HHHHHHHHTTCEEEEECCT-T---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEEeCCC-C---CCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 345789999999999 999 6 4543221 2222 12345555555554
No 443
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=72.04 E-value=13 Score=34.37 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=32.1
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCCCCccCCCCCchHHHHhhCCeEEEE-CCCCCcc
Q 007140 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPII 567 (616)
Q Consensus 489 ~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~la~~Gy~Vl~-n~R~GS~ 567 (616)
..||.+|+...+-|.+ ... |.||+.++- + ++...| . .....|++ +|.|+. |.| |
T Consensus 8 ~~~g~~l~y~~~g~~~----~~~--~~vvllHG~--------~---~~~~~~---~-~~~~~L~~-~~~vi~~D~~-G-- 62 (266)
T 2xua_A 8 AVNGTELHYRIDGERH----GNA--PWIVLSNSL--------G---TDLSMW---A-PQVAALSK-HFRVLRYDTR-G-- 62 (266)
T ss_dssp ECSSSEEEEEEESCSS----SCC--CEEEEECCT--------T---CCGGGG---G-GGHHHHHT-TSEEEEECCT-T--
T ss_pred EECCEEEEEEEcCCcc----CCC--CeEEEecCc--------c---CCHHHH---H-HHHHHHhc-CeEEEEecCC-C--
Confidence 3589999887764421 002 566666220 0 000123 1 33556664 599999 999 6
Q ss_pred ccCCC
Q 007140 568 GEGDK 572 (616)
Q Consensus 568 GyG~~ 572 (616)
+|..
T Consensus 63 -~G~S 66 (266)
T 2xua_A 63 -HGHS 66 (266)
T ss_dssp -STTS
T ss_pred -CCCC
Confidence 5554
No 444
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=72.03 E-value=5.6 Score=37.19 Aligned_cols=44 Identities=11% Similarity=0.205 Sum_probs=26.4
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
...+.|+++||.|+. |.| | +|..-.. ..+. ....+|+.+.++++
T Consensus 41 ~~~~~L~~~g~~vi~~D~~-G---~G~S~~~~~~~~~~~~~~dl~~~l~~l 87 (279)
T 1hkh_A 41 RQTRELLAQGYRVITYDRR-G---FGGSSKVNTGYDYDTFAADLHTVLETL 87 (279)
T ss_dssp HHHHHHHHTTEEEEEECCT-T---STTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhCCcEEEEeCCC-C---CCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 345679999999999 999 6 4443221 2221 12345666655554
No 445
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=71.24 E-value=80 Score=30.82 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=11.7
Q ss_pred ceeeeeECCC---CcEEEEE
Q 007140 176 VYTAVEPSPD---QKYVLIT 192 (616)
Q Consensus 176 ~~~~~~~SpD---g~~i~~~ 192 (616)
....++++|| +.+|++.
T Consensus 81 GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 81 GLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEECTTHHHHCEEEEE
T ss_pred CceeeEeccccccCCEEEEE
Confidence 3458999997 4566654
No 446
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=71.19 E-value=4.2 Score=37.40 Aligned_cols=17 Identities=18% Similarity=0.141 Sum_probs=14.0
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
..+.|++ ||.|+. |.| |
T Consensus 39 ~~~~l~~-g~~v~~~D~~-G 56 (269)
T 4dnp_A 39 ILPFFLR-DYRVVLYDLV-C 56 (269)
T ss_dssp TGGGGTT-TCEEEEECCT-T
T ss_pred HHHHHhC-CcEEEEEcCC-C
Confidence 3466777 999999 999 7
No 447
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=70.61 E-value=54 Score=32.03 Aligned_cols=150 Identities=11% Similarity=0.061 Sum_probs=0.0
Q ss_pred eeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCCCCCccccCccCCCCcceeecC---CCc
Q 007140 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD---KPS 255 (616)
Q Consensus 179 ~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd---g~~ 255 (616)
.++|.|||++|+++.... .|++++.+++..+.+.. .+........+...+.++|| +..
T Consensus 22 ~i~~~pdG~~l~V~e~~G-------------~i~~~~~~g~~~~~~~~------~~~v~~~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 22 ALAFLPDNHGMLITLRGG-------------ELRHWQAGKGLSAPLSG------VPDVWAHGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp EEEECSTTCCEEEEETTT-------------EEEEEETTTEECCCCBS------CCCCCCSTTCSEEEEEECTTHHHHCE
T ss_pred EEEEcCCCCEEEEEeCCc-------------eEEEEeCCCceeeEecC------CcccccCCCCCceeEEECCCCCCCCE
Q ss_pred eEEEEEeecCCCcccccCC-------CceeEeccCCCCCCC-----CceEecccccc-------ccceeecCCCceEEEe
Q 007140 256 TLYWVEAQDRGDANVEVSP-------RDIIYTQPAEPAEGE-----KPEILHKLDLR-------FRSVSWCDDSLALVNE 316 (616)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~-------~~~~~~~~~~~~~~g-----~~~~l~~~~~~-------~~~~~wspDg~~l~~~ 316 (616)
||.. ... ...++.++. +++ ..+.+...... ...+.|+|||..++..
T Consensus 83 -lYv~-----------~~~~~~~g~~~~~v~r~~~---~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 83 -IWLS-----------YSEVGDDGKAGTAVGYGRL---SDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp -EEEE-----------EEEECSSSCEEEEEEEEEE---CTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred -EEEE-----------EeCCCCCCCceeEEEEEEE---CCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Q ss_pred eec---------cCccEEEEEEeCCCC-------------CCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 317 TWY---------KTSQTRTWLVCPGSK-------------DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 317 ~~~---------~~~~~~l~~~d~~~~-------------~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
... ......|++++.++. ..+.-..--++... ++|.++...|++..
T Consensus 148 Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g---------l~~d~~~g~l~~~d 215 (353)
T 2g8s_A 148 GENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQG---------MAMNPWSNALWLNE 215 (353)
T ss_dssp CCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEE---------EEEETTTTEEEEEE
T ss_pred CCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccc---------eEEECCCCCEEEEe
No 448
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=69.60 E-value=6.6 Score=38.38 Aligned_cols=15 Identities=7% Similarity=0.180 Sum_probs=13.1
Q ss_pred HHhhCCeEEEE-CCCCC
Q 007140 550 IFLARRFAVLA-GPSIP 565 (616)
Q Consensus 550 ~la~~Gy~Vl~-n~R~G 565 (616)
.|+++||.|+. |.| |
T Consensus 84 ~l~~~g~~vi~~D~~-G 99 (366)
T 2pl5_A 84 SFDTNQYFIICSNVI-G 99 (366)
T ss_dssp SEETTTCEEEEECCT-T
T ss_pred cccccccEEEEecCC-C
Confidence 36789999999 999 7
No 449
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=69.17 E-value=17 Score=35.28 Aligned_cols=19 Identities=16% Similarity=-0.083 Sum_probs=16.7
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|+++||.|+. |+| |
T Consensus 32 ~l~~~L~~~G~~V~~~d~~-g 51 (320)
T 1ys1_X 32 GIQEDLQQRGATVYVANLS-G 51 (320)
T ss_dssp THHHHHHHTTCCEEECCCC-S
T ss_pred HHHHHHHhCCCEEEEEcCC-C
Confidence 456889999999999 999 6
No 450
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=68.48 E-value=89 Score=30.25 Aligned_cols=63 Identities=10% Similarity=-0.065 Sum_probs=39.4
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCC----ccccccccceEE---ecCCcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD----ICLNAVFGSFVW---VNNSTLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~----~~~~~~~~~~~w---spdg~~l~~~ 104 (616)
....++|.+...++.+..- ....|.++++.++....++ .+. +.-......+.| .|+++.++.+
T Consensus 14 yPE~~~wd~~~g~~~vs~l---------~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~ 83 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNL---------YKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM 83 (334)
T ss_dssp CCSCEEEETTTTEEEEEET---------TTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE
T ss_pred CCcCccCcCCCCEEEEEec---------cCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEE
Confidence 3568999998887666542 3578999999876544442 222 110112358899 5887766543
No 451
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=68.22 E-value=12 Score=33.61 Aligned_cols=15 Identities=7% Similarity=0.157 Sum_probs=12.2
Q ss_pred HHHhhCCeEEEE-CCCCC
Q 007140 549 LIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~G 565 (616)
..|+ +||.|+. |+| |
T Consensus 36 ~~l~-~g~~v~~~d~~-g 51 (245)
T 3e0x_A 36 EKYL-EDYNCILLDLK-G 51 (245)
T ss_dssp GGGC-TTSEEEEECCT-T
T ss_pred HHHH-hCCEEEEecCC-C
Confidence 3344 8999999 999 7
No 452
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=68.14 E-value=30 Score=33.87 Aligned_cols=59 Identities=10% Similarity=0.061 Sum_probs=34.7
Q ss_pred cccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCceEecccCCCccc--cccccceEEecC---CcEEEEE
Q 007140 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVNN---STLLIFT 104 (616)
Q Consensus 32 ~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~--~~~~~~~~wspd---g~~l~~~ 104 (616)
....++|+|||+ +|++.. ...|++++ .|+...+...+ ... ......+.|+|| +..|++.
T Consensus 32 ~P~~ia~~pdG~--l~V~e~---------~g~I~~i~--~g~~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 32 VPWALAFLPDGG--MLIAER---------PGRIRLFR--EGRLSTYAELS-VYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp CEEEEEECTTSC--EEEEET---------TTEEEEEE--TTEEEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCe--EEEEeC---------CCeEEEEE--CCCccEeecce-EeecCCCCceeEEECCCCCCCCEEEEE
Confidence 356789999998 444432 26889888 45544433221 000 011347889998 6666664
No 453
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=68.03 E-value=8.4 Score=37.35 Aligned_cols=17 Identities=6% Similarity=-0.083 Sum_probs=13.4
Q ss_pred HHHHhh-CCeEEEE-CCCCC
Q 007140 548 SLIFLA-RRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~-~Gy~Vl~-n~R~G 565 (616)
...|+. .||.|+. |.| |
T Consensus 74 ~~~l~~~~~~~Via~D~r-G 92 (330)
T 3nwo_A 74 IAALADETGRTVIHYDQV-G 92 (330)
T ss_dssp GGGHHHHHTCCEEEECCT-T
T ss_pred HHHhccccCcEEEEECCC-C
Confidence 345665 7999999 999 6
No 454
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=65.38 E-value=18 Score=35.12 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=31.9
Q ss_pred HHHHhhCCeEEEE-CCCCCc-cccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEE
Q 007140 548 SLIFLARRFAVLA-GPSIPI-IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLN 606 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS-~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~ 606 (616)
.+.| ++||.|+. |.| .. .|+|..- .....+|+.+.+++|.++ .+.+++.+
T Consensus 61 ~~~L-~~g~~Vi~~Dl~-~D~~G~G~S~-----~~~~~~d~~~~~~~l~~~--l~~~~~~L 112 (335)
T 2q0x_A 61 AEEL-QGDWAFVQVEVP-SGKIGSGPQD-----HAHDAEDVDDLIGILLRD--HCMNEVAL 112 (335)
T ss_dssp HHHH-TTTCEEEEECCG-GGBTTSCSCC-----HHHHHHHHHHHHHHHHHH--SCCCCEEE
T ss_pred HHHH-HCCcEEEEEecc-CCCCCCCCcc-----ccCcHHHHHHHHHHHHHH--cCCCcEEE
Confidence 3445 78999999 875 32 3566531 123568888889988764 33355544
No 455
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=65.33 E-value=16 Score=34.09 Aligned_cols=16 Identities=6% Similarity=-0.288 Sum_probs=12.2
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
...|+++ |.|+. |+| |
T Consensus 49 ~~~L~~~-~~vi~~D~~-G 65 (302)
T 1mj5_A 49 MPHCAGL-GRLIACDLI-G 65 (302)
T ss_dssp GGGGTTS-SEEEEECCT-T
T ss_pred HHHhccC-CeEEEEcCC-C
Confidence 4556655 79999 999 6
No 456
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=64.84 E-value=7.7 Score=36.39 Aligned_cols=19 Identities=16% Similarity=0.034 Sum_probs=16.1
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
.....|+++||.|+. |.| |
T Consensus 22 ~~~~~L~~~g~rVia~Dl~-G 41 (273)
T 1xkl_A 22 KLKPLLEAAGHKVTALDLA-A 41 (273)
T ss_dssp THHHHHHHTTCEEEECCCT-T
T ss_pred HHHHHHHhCCCEEEEecCC-C
Confidence 346778899999999 999 6
No 457
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=63.48 E-value=10 Score=34.83 Aligned_cols=17 Identities=18% Similarity=0.026 Sum_probs=12.6
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
....|+. +|.|+. |+| |
T Consensus 39 ~~~~l~~-~~~v~~~d~~-G 56 (267)
T 3fla_A 39 LAKALAP-AVEVLAVQYP-G 56 (267)
T ss_dssp HHHHHTT-TEEEEEECCT-T
T ss_pred HHHHhcc-CcEEEEecCC-C
Confidence 3455654 599999 999 6
No 458
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=63.38 E-value=25 Score=31.95 Aligned_cols=18 Identities=17% Similarity=0.213 Sum_probs=13.2
Q ss_pred chHHHHhhCCeEEEE-CCCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~G 565 (616)
...+.|+ ++|.|+. |.| |
T Consensus 39 ~~~~~L~-~~~~v~~~D~~-G 57 (264)
T 3ibt_A 39 NLAPLLA-RDFHVICPDWR-G 57 (264)
T ss_dssp THHHHHT-TTSEEEEECCT-T
T ss_pred HHHHHHH-hcCcEEEEccc-c
Confidence 3345664 5699999 999 6
No 459
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=63.35 E-value=19 Score=33.46 Aligned_cols=16 Identities=6% Similarity=-0.284 Sum_probs=12.2
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
.+.|++ +|.|+. |.| |
T Consensus 48 ~~~l~~-~~~vi~~D~~-G 64 (297)
T 2qvb_A 48 MPHLEG-LGRLVACDLI-G 64 (297)
T ss_dssp GGGGTT-SSEEEEECCT-T
T ss_pred HHHHhh-cCeEEEEcCC-C
Confidence 455665 599999 999 6
No 460
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=62.90 E-value=8.5 Score=33.48 Aligned_cols=17 Identities=12% Similarity=-0.140 Sum_probs=14.6
Q ss_pred HHHhhCCeEEEE-CCCCCc
Q 007140 549 LIFLARRFAVLA-GPSIPI 566 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~GS 566 (616)
..|+++||.|+. |+| .|
T Consensus 27 ~~l~~~g~~v~~~d~~-~~ 44 (192)
T 1uxo_A 27 KRLLADGVQADILNMP-NP 44 (192)
T ss_dssp HHHHHTTCEEEEECCS-CT
T ss_pred HHHHhCCcEEEEecCC-CC
Confidence 468899999999 999 65
No 461
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=62.08 E-value=2.5 Score=38.93 Aligned_cols=60 Identities=3% Similarity=-0.204 Sum_probs=35.7
Q ss_pred hHHHHhhCCeEEEE-CCCCCcc------------------ccCCC--ccCChhHHHHHHHHHHHHHHHHHcCCccCCceE
Q 007140 547 SSLIFLARRFAVLA-GPSIPII------------------GEGDK--LPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYL 605 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~------------------GyG~~--f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~ 605 (616)
+.+.|..+||.|+. |.+ +.. |.|.. |.. .....++.|+.+++++|.+.-..+..||+
T Consensus 28 l~~~l~~~g~~v~~~d~p-~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 105 (243)
T 1ycd_A 28 IRKLLKKANVQCDYIDAP-VLLEKKDLPFEMDDEKWQATLDADVNRAWFY-HSEISHELDISEGLKSVVDHIKANGPYDG 105 (243)
T ss_dssp HHHHHHHTTCEEEEECCS-EECCGGGCSSCCCHHHHHHHHHTTCCEESSC-CCSSGGGCCCHHHHHHHHHHHHHHCCCSE
T ss_pred HHHHHhhcceEEEEcCCC-eeCCCcCcccccccccccccCCCCCCccccc-CCCCcchhhHHHHHHHHHHHHHhcCCeeE
Confidence 34567777999999 988 431 22221 111 00112467888888888765445667777
Q ss_pred EEe
Q 007140 606 NTT 608 (616)
Q Consensus 606 ~~~ 608 (616)
|-+
T Consensus 106 l~G 108 (243)
T 1ycd_A 106 IVG 108 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 462
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=61.72 E-value=15 Score=33.91 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=26.0
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
...+.|+++||.|+. |.| | +|..-... ...++++++.+..+++.
T Consensus 34 ~~~~~L~~~~~~vi~~Dl~-G---hG~S~~~~---~~~~~~~a~~l~~~l~~ 78 (264)
T 1r3d_A 34 PVLSHLARTQCAALTLDLP-G---HGTNPERH---CDNFAEAVEMIEQTVQA 78 (264)
T ss_dssp HHHHHHTTSSCEEEEECCT-T---CSSCC----------CHHHHHHHHHHHT
T ss_pred HHHHHhcccCceEEEecCC-C---CCCCCCCC---ccCHHHHHHHHHHHHHH
Confidence 335667768999999 999 6 55542211 12456666666666655
No 463
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=61.35 E-value=9.1 Score=35.43 Aligned_cols=23 Identities=17% Similarity=0.069 Sum_probs=18.2
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
.....|+++||.|+. |.| | +|..
T Consensus 21 ~~~~~L~~~g~~via~Dl~-G---~G~S 44 (257)
T 3c6x_A 21 KLKPLLEALGHKVTALDLA-A---SGVD 44 (257)
T ss_dssp THHHHHHHTTCEEEEECCT-T---STTC
T ss_pred HHHHHHHhCCCEEEEeCCC-C---CCCC
Confidence 346789999999999 999 6 4554
No 464
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=60.74 E-value=79 Score=30.83 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=33.9
Q ss_pred ccceeecCCCceEEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCC---CCEEEEEee
Q 007140 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST---GTNVIAKIK 372 (616)
Q Consensus 301 ~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~d---gk~l~~~~~ 372 (616)
...++|.|||..++.+.. .+|++++.++ + +.+....+.. ....+-.-++++|+ +..||+...
T Consensus 31 P~~ia~~pdG~l~V~e~~-----g~I~~~d~~G---~-~~~~~~~v~~-~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERP-----GRLVLISPSG---K-KLVASFDVAN-VGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEEEETTEEEEEETT-----TEEEEECSSC---E-EEEEECCCCC-STTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCC-----CEEEEEeCCC---c-eEeeccceee-cCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 456889999987666542 2788887543 3 3332211100 00011113778887 667777654
No 465
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=59.87 E-value=6.1 Score=40.33 Aligned_cols=58 Identities=3% Similarity=-0.145 Sum_probs=35.2
Q ss_pred HHHHhh-CCeEEEE-CCCCCccccCCCccCChhH-HHHHHHHHHHHHHHHHcCCccCCceEEEe
Q 007140 548 SLIFLA-RRFAVLA-GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNTT 608 (616)
Q Consensus 548 ~q~la~-~Gy~Vl~-n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~~ 608 (616)
.+.|++ +||.|+. |.| |. |... +....+. ....+|+.+.+++|.++--++.++|.+-+
T Consensus 92 ~~~l~~~~~~~Vi~~D~~-g~-g~s~-~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i~lvG 152 (432)
T 1gpl_A 92 CKNMFQVEKVNCICVDWK-GG-SKAQ-YSQASQNIRVVGAEVAYLVQVLSTSLNYAPENVHIIG 152 (432)
T ss_dssp HHHHHHHCCEEEEEEECH-HH-HTSC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHhcCCcEEEEEECc-cc-cCcc-chhhHhhHHHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 455665 7999999 999 63 2221 2211111 23447888899998865225667776544
No 466
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=59.67 E-value=4.2 Score=37.48 Aligned_cols=42 Identities=12% Similarity=0.138 Sum_probs=24.4
Q ss_pred HHHHhh-CCeEEEE-CCCCCccccCCCccCChhH-HHHHHHHHHHHHHH
Q 007140 548 SLIFLA-RRFAVLA-GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 548 ~q~la~-~Gy~Vl~-n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l 593 (616)
...|+. +||.|+. |+| | +|..-....+. ....+|+.+.++++
T Consensus 41 ~~~l~~~~g~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~~~~~l~~~ 85 (272)
T 3fsg_A 41 FEPLSNVGQYQRIYLDLP-G---MGNSDPISPSTSDNVLETLIEAIEEI 85 (272)
T ss_dssp HTTSTTSTTSEEEEECCT-T---STTCCCCSSCSHHHHHHHHHHHHHHH
T ss_pred HHHHhccCceEEEEecCC-C---CCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 344666 7999999 999 6 45443321121 23445565555553
No 467
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=58.47 E-value=14 Score=31.67 Aligned_cols=49 Identities=6% Similarity=-0.145 Sum_probs=29.9
Q ss_pred chHHHHhhCCe---EEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHcCCccCCceEE
Q 007140 546 TSSLIFLARRF---AVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVGLPILYLN 606 (616)
Q Consensus 546 ~~~q~la~~Gy---~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~~~vD~~ri~~ 606 (616)
...+.|+++|| .|+. |+| | +|... ....+++.+.++.++++ .+.+++.+
T Consensus 21 ~~~~~l~~~G~~~~~v~~~d~~-g---~g~s~------~~~~~~~~~~~~~~~~~--~~~~~~~l 73 (181)
T 1isp_A 21 GIKSYLVSQGWSRDKLYAVDFW-D---KTGTN------YNNGPVLSRFVQKVLDE--TGAKKVDI 73 (181)
T ss_dssp HHHHHHHHTTCCGGGEEECCCS-C---TTCCH------HHHHHHHHHHHHHHHHH--HCCSCEEE
T ss_pred HHHHHHHHcCCCCccEEEEecC-C---CCCch------hhhHHHHHHHHHHHHHH--cCCCeEEE
Confidence 45678999999 4888 999 6 33321 13456666666666654 23345544
No 468
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=57.74 E-value=18 Score=36.09 Aligned_cols=78 Identities=9% Similarity=0.023 Sum_probs=44.8
Q ss_pred eeEEeecCCCCCCCCceeeecCCCCCcccceEEccCCCeEEEEEeeccccccCCCceeEEEEECCCCce---EecccCCC
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFESPD 82 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~---~~lt~~~~ 82 (616)
.|++-+++. +...++. . .+...+|||+| ++.... + +.+.++++++++. +.|...+.
T Consensus 147 ~L~v~dl~~----~~~~~~~---~--~Vs~v~WSpkG--~~vg~~--------d--g~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 147 DLSALDLRT----KSTKQLA---Q--NVTSFDVTNSQ--LAVLLK--------D--RSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp EEEEEETTT----CCEEEEE---E--SEEEEEECSSE--EEEEET--------T--SCEEEEEEETTEEEEEEEECCCHH
T ss_pred CEEEEEccC----Ccccccc---C--CceEEEEcCCc--eEEEEc--------C--CcEEEEcCCCccccccceecCCcc
Confidence 467778865 5554443 1 48899999999 443331 3 4455557667663 23311110
Q ss_pred c----cccccccceEEecCCcEEEEE
Q 007140 83 I----CLNAVFGSFVWVNNSTLLIFT 104 (616)
Q Consensus 83 ~----~~~~~~~~~~wspdg~~l~~~ 104 (616)
. .-+..+..+.|.+++++++..
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEEE
Confidence 0 001225689999999976554
No 469
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=54.26 E-value=11 Score=38.67 Aligned_cols=55 Identities=4% Similarity=-0.100 Sum_probs=32.9
Q ss_pred HHHhh-CCeEEEE-CCCCCccccCCC-ccCChhH-HHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 549 LIFLA-RRFAVLA-GPSIPIIGEGDK-LPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 549 q~la~-~Gy~Vl~-n~R~GS~GyG~~-f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
..|++ .||.|+. |.| | +|.. +....+. ....+|+.+.+++|.++.-++.+++.+-
T Consensus 93 ~~l~~~~~~~Vi~~D~~-G---~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~i~Lv 151 (452)
T 1bu8_A 93 KKMFQVEKVNCICVDWR-R---GSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLI 151 (452)
T ss_dssp HHHHTTCCEEEEEEECH-H---HHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HHHHhhCCCEEEEEech-h---cccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccceEEE
Confidence 44555 4999999 999 6 3332 2211111 2345788888888876533466676553
No 470
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=54.18 E-value=39 Score=31.83 Aligned_cols=40 Identities=18% Similarity=-0.021 Sum_probs=26.4
Q ss_pred chHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc
Q 007140 546 TSSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 546 ~~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
...+.|+++||.|+. |+| | +|.. ....+++.+.++.+++.
T Consensus 30 ~~~~~L~~~G~~v~~~d~~-g---~g~s-------~~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 30 GIPSALRRDGAQVYVTEVS-Q---LDTS-------EVRGEQLLQQVEEIVAL 70 (285)
T ss_dssp THHHHHHHTTCCEEEECCC-S---SSCH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEeCC-C---CCCc-------hhhHHHHHHHHHHHHHH
Confidence 456789999999999 999 6 3432 12345555555555543
No 471
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=59.09 E-value=2.7 Score=39.68 Aligned_cols=17 Identities=6% Similarity=0.188 Sum_probs=13.9
Q ss_pred hHHHHhhCCeEEEE-CCCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~G 565 (616)
..+.|+ +||.|+. |+| |
T Consensus 44 ~~~~l~-~g~~v~~~D~~-G 61 (304)
T 3b12_A 44 VAPLLA-NEYTVVCADLR-G 61 (304)
Confidence 345676 8999999 999 6
No 472
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=53.74 E-value=20 Score=34.66 Aligned_cols=41 Identities=7% Similarity=-0.085 Sum_probs=28.7
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccCChhHHHHHHHHHHHHHHHHHc
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g~~~~~D~~~~v~~l~~~ 596 (616)
..+.|+++||.|+. |++ | +|.. . . ....+++.+.++++++.
T Consensus 86 l~~~L~~~Gy~V~a~Dlp-G---~G~~--~--~-~~~~~~la~~I~~l~~~ 127 (316)
T 3icv_A 86 WIPLSAQLGYTPCWISPP-P---FMLN--D--T-QVNTEYMVNAITTLYAG 127 (316)
T ss_dssp HHHHHHHTTCEEEEECCT-T---TTCS--C--H-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEecCC-C---CCCC--c--H-HHHHHHHHHHHHHHHHH
Confidence 45789999999999 999 6 3432 1 1 22456788888888765
No 473
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=52.50 E-value=1.7e+02 Score=28.29 Aligned_cols=69 Identities=19% Similarity=0.164 Sum_probs=36.4
Q ss_pred ceeeeeECCC---CcEEEEEeccCCCcccccCcccCccEEEEeCCCc---eEE-EecCCCCCCCCCccccCccCCCCcce
Q 007140 176 VYTAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK---LVR-ELCDLPPAEDIPVCYNSVREGMRSIS 248 (616)
Q Consensus 176 ~~~~~~~SpD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 248 (616)
....++++|| +.+|++....... .....|++++.+++ ..+ .+..++.... .......+.
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~-------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~-------~~h~~~~l~ 141 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEG-------GLRNQVVRLRHLGERGVLDRVVLDGIPARPH-------GLHSGGRIA 141 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTT-------SSEEEEEEEEECSSCEEEEEEEEEEECCCTT-------CCCCCCCEE
T ss_pred CceeEEECCCCCCCCEEEEEEecCCC-------CCccEEEEEEeCCCCcCceEEEEEeCCCCCC-------CCcCCceEE
Confidence 3468999999 7777776432110 00146788887654 222 2333331000 011124688
Q ss_pred eecCCCceEEEE
Q 007140 249 WRADKPSTLYWV 260 (616)
Q Consensus 249 wspdg~~~l~~~ 260 (616)
+.|||. ||+.
T Consensus 142 ~~pdG~--Lyv~ 151 (352)
T 2ism_A 142 FGPDGM--LYVT 151 (352)
T ss_dssp ECTTSC--EEEE
T ss_pred ECCCCC--EEEE
Confidence 999995 6554
No 474
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=51.77 E-value=44 Score=30.97 Aligned_cols=16 Identities=19% Similarity=0.000 Sum_probs=12.5
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
.+.|+++ |.|+. |.| |
T Consensus 52 ~~~L~~~-~~vi~~D~~-G 68 (285)
T 1c4x_A 52 IPDLAEN-FFVVAPDLI-G 68 (285)
T ss_dssp HHHHHTT-SEEEEECCT-T
T ss_pred HHHHhhC-cEEEEecCC-C
Confidence 4556655 99999 999 6
No 475
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=49.90 E-value=27 Score=33.39 Aligned_cols=17 Identities=12% Similarity=0.040 Sum_probs=13.4
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
..++...||.|+. |.| |
T Consensus 98 ~~~~~~lg~~Vi~~D~~-G 115 (330)
T 3p2m_A 98 DTVIVGLGEPALAVDLP-G 115 (330)
T ss_dssp HHHHHHSCCCEEEECCT-T
T ss_pred HHHHHHcCCeEEEEcCC-C
Confidence 4455566999999 999 7
No 476
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=49.49 E-value=2.5e+02 Score=29.35 Aligned_cols=57 Identities=18% Similarity=0.057 Sum_probs=32.3
Q ss_pred eeEEeecCCCCCCCCceeeecCCCC-----CcccceEEc---cCCC--eEEEEEeeccccccCCCceeEEEEECCCCceE
Q 007140 6 GIGIHRLLPDDSLGPEKEVHGYPDG-----AKINFVSWS---PDGK--RIAFSVRVDEEDNVSSCKLRVWIADAETGEAK 75 (616)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~-----~~~~~~~~S---PDG~--~iaf~~~~~~~~~~~~~~~~l~v~~~~~g~~~ 75 (616)
.|+-.+.+ +|+.+--.+.... .....|.+. +||+ ++.+... ....||++|.++|+..
T Consensus 273 ~v~Ald~~----tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~---------~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 273 TIWGRDLD----TGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID---------RNGILYTLNRENGNLI 339 (571)
T ss_dssp EEEEEETT----TCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC---------TTSEEEEEETTTCCEE
T ss_pred EEEEEecC----CCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC---------CCcEEEEEECCCCCEE
Confidence 36666664 4776544333211 013456554 4787 4444442 3468999999998754
No 477
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=49.12 E-value=13 Score=36.13 Aligned_cols=64 Identities=16% Similarity=0.054 Sum_probs=36.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCcccCC-CCccCCCCCchHHHHhhCCeEEEE-CCC
Q 007140 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGS-PNEFSGMTPTSSLIFLARRFAVLA-GPS 563 (616)
Q Consensus 490 ~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~la~~Gy~Vl~-n~R 563 (616)
..+....++||.|.+..+++. +.|++|..|+ ++|.... ...|.... .+.++--++||+|+. +-.
T Consensus 199 ~~~~~~~~~~yvP~~~~~~~~-~~~l~v~lHG--------c~~~~~~~g~~~~~~~-~~~~~Ad~~~~iv~yP~~~ 264 (318)
T 2d81_A 199 ANGMDTTGYLYVPQSCASGAT-VCSLHVALHG--------CLQSYSSIGSRFIQNT-GYNKWADTNNMIILYPQAI 264 (318)
T ss_dssp CTTBCSEEEEEECHHHHSSSS-CEEEEEEECC--------TTCSHHHHTTHHHHHS-CHHHHHTTTTEEEEECCBC
T ss_pred CCCCCcceEEEecCCCCCCCC-CCCEEEEecC--------CCCCcchhhhhhhccc-ChHHHHHhCCeEEEeCCCc
Confidence 356778889999999876532 1578888743 2222100 01221101 234555677999999 443
No 478
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=47.29 E-value=22 Score=31.16 Aligned_cols=18 Identities=6% Similarity=0.036 Sum_probs=13.8
Q ss_pred HHHHhhCC--eEEEE-CCCCCc
Q 007140 548 SLIFLARR--FAVLA-GPSIPI 566 (616)
Q Consensus 548 ~q~la~~G--y~Vl~-n~R~GS 566 (616)
.++++++| |.|+. |++ |+
T Consensus 24 ~~~~~~~~~~~~v~~pdl~-~~ 44 (202)
T 4fle_A 24 KSWLQQHHPHIEMQIPQLP-PY 44 (202)
T ss_dssp HHHHHHHCTTSEEECCCCC-SS
T ss_pred HHHHHHcCCCcEEEEeCCC-CC
Confidence 46677765 99999 999 64
No 479
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=46.93 E-value=23 Score=33.72 Aligned_cols=44 Identities=11% Similarity=0.220 Sum_probs=27.4
Q ss_pred hHHHHhh-CCeEEEE-CCCCCccccCCCccC--ChhH-HHHHHHHHHHHHHHH
Q 007140 547 SSLIFLA-RRFAVLA-GPSIPIIGEGDKLPN--DRFV-EQLVSSAEAAVEEVV 594 (616)
Q Consensus 547 ~~q~la~-~Gy~Vl~-n~R~GS~GyG~~f~~--~~~g-~~~~~D~~~~v~~l~ 594 (616)
....|++ .+|.|+. |.| | +|..-.. ..+. ....+|+.+.+++|.
T Consensus 57 ~~~~L~~~~~~~via~Dl~-G---hG~S~~~~~~~~~~~~~a~dl~~~l~~l~ 105 (316)
T 3c5v_A 57 FTAAIISRVQCRIVALDLR-S---HGETKVKNPEDLSAETMAKDVGNVVEAMY 105 (316)
T ss_dssp HHHHHHTTBCCEEEEECCT-T---STTCBCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEecCC-C---CCCCCCCCccccCHHHHHHHHHHHHHHHh
Confidence 3455665 3999999 999 6 5554221 2222 335677777777774
No 480
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=46.50 E-value=17 Score=37.31 Aligned_cols=55 Identities=5% Similarity=-0.119 Sum_probs=32.0
Q ss_pred HHHhhC-CeEEEE-CCCCCccccCCC-ccCChhH-HHHHHHHHHHHHHHHHcCCccCCceEEE
Q 007140 549 LIFLAR-RFAVLA-GPSIPIIGEGDK-LPNDRFV-EQLVSSAEAAVEEVVRRGVGLPILYLNT 607 (616)
Q Consensus 549 q~la~~-Gy~Vl~-n~R~GS~GyG~~-f~~~~~g-~~~~~D~~~~v~~l~~~~~vD~~ri~~~ 607 (616)
..|+++ ||.|+. |.| | +|.. +....+. ....+|+.+.+++|.++.-++.+++.+-
T Consensus 93 ~~l~~~~~~~Vi~~D~~-g---~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i~Lv 151 (452)
T 1w52_X 93 KKILQVETTNCISVDWS-S---GAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENVHII 151 (452)
T ss_dssp HHHHTTSCCEEEEEECH-H---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HHHHhhCCCEEEEEecc-c---ccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 456554 999999 999 6 3332 2211111 2234678888888875522455666543
No 481
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=45.80 E-value=59 Score=30.32 Aligned_cols=16 Identities=6% Similarity=-0.004 Sum_probs=12.7
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
...|+++ |-|+. |.| |
T Consensus 49 ~~~L~~~-~~via~Dl~-G 65 (294)
T 1ehy_A 49 IGPLAEH-YDVIVPDLR-G 65 (294)
T ss_dssp HHHHHTT-SEEEEECCT-T
T ss_pred HHHHhhc-CEEEecCCC-C
Confidence 4567665 99999 999 6
No 482
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=45.45 E-value=73 Score=29.69 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=14.7
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
...|+++ |.|+. |.| | +|..
T Consensus 59 ~~~L~~~-~~via~Dl~-G---~G~S 79 (291)
T 2wue_A 59 IAVLARH-FHVLAVDQP-G---YGHS 79 (291)
T ss_dssp HHHHTTT-SEEEEECCT-T---STTS
T ss_pred HHHHHhc-CEEEEECCC-C---CCCC
Confidence 4567665 99999 999 6 5544
No 483
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=45.39 E-value=47 Score=26.14 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=26.3
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCC
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDG 511 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~ 511 (616)
-+=.|++++.||..+.+.=..|+++.+++.|
T Consensus 74 GplSfRvtts~G~~~va~nViPa~W~~Gqty 104 (108)
T 2jnz_A 74 GPFNFRFMSKGGMRNVFDEVIPTAFSIGKTY 104 (108)
T ss_dssp SSEEEEEEETTTEEEEEEEEECSSCCTTCEE
T ss_pred CCEEEEEEEcCCcEEEECeEECCCCCCCCEE
Confidence 3556788889999999999999999998765
No 484
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=43.96 E-value=29 Score=32.22 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=24.1
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCc-cC-ChhHHHHHHHHHHHHHHHHHc
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKL-PN-DRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f-~~-~~~g~~~~~D~~~~v~~l~~~ 596 (616)
...|+ +||.|+. |.| | +|..- .. ..+ .++|+++.+..++++
T Consensus 63 ~~~L~-~~~~vi~~D~~-G---~G~S~~~~~~~~---~~~~~~~~l~~~l~~ 106 (292)
T 3l80_A 63 IDKLP-DSIGILTIDAP-N---SGYSPVSNQANV---GLRDWVNAILMIFEH 106 (292)
T ss_dssp HTTSC-TTSEEEEECCT-T---STTSCCCCCTTC---CHHHHHHHHHHHHHH
T ss_pred HHHHh-hcCeEEEEcCC-C---CCCCCCCCcccc---cHHHHHHHHHHHHHH
Confidence 34454 7999999 999 6 45443 11 222 355555555555544
No 485
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=43.50 E-value=2.3e+02 Score=27.29 Aligned_cols=163 Identities=13% Similarity=0.045 Sum_probs=81.3
Q ss_pred eeeeECCCCcEEEEEeccCCCcccccCcccCccEEEEeCCCceEEEecCCCCCC--CCCccccCccCCCCccee---ecC
Q 007140 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE--DIPVCYNSVREGMRSISW---RAD 252 (616)
Q Consensus 178 ~~~~~SpDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~w---spd 252 (616)
..+.|.+...++++..... ..|.+++..++....+ ..+... ..+. .....+.| -|+
T Consensus 16 E~~~wd~~~g~~~vs~l~~------------g~V~~~~~~~~~~~~~-~~~~~s~~g~~~------~~~sGl~~~~~D~~ 76 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYK------------GRIEVYNPKTQSHFNV-VIDGASSNGDGE------QQMSGLSLLTHDNS 76 (334)
T ss_dssp SCEEEETTTTEEEEEETTT------------TEEEEECTTTCCEEEE-CCTTTCCSSCCS------EEEEEEEESSSSSC
T ss_pred cCccCcCCCCEEEEEeccC------------CEEEEEcCCCCeEEEE-ecCCccccCCCc------ceeeEEEEeccCCC
Confidence 4789988777888886532 4788899886654444 322100 0000 00124778 466
Q ss_pred CCceEEEEEeecCCCcc---cccCCCceeEeccCCCCC---CCCceE---eccc-c----------ccccceeecCCCce
Q 007140 253 KPSTLYWVEAQDRGDAN---VEVSPRDIIYTQPAEPAE---GEKPEI---LHKL-D----------LRFRSVSWCDDSLA 312 (616)
Q Consensus 253 g~~~l~~~~~~d~~~~~---~~~~~~~~~~~~~~~~~~---~g~~~~---l~~~-~----------~~~~~~~wspDg~~ 312 (616)
++ |+.+ ...+.... ........++.+++ . +++... |... . .....+...++|..
T Consensus 77 gr--L~vv-~~~~~af~~~g~~~~g~~~v~~~Dl---~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 77 KR--LFAV-MKNAKSFNFADQSSHGASSFHSFNL---PLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp CE--EEEE-EEETTTTCTTSCCSSSCCEEEEEES---SCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred Cc--EEEE-EcccccccccccccCCCCEEEEEcC---CcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 54 4332 11111111 11122345666676 4 344432 2211 1 12345667788887
Q ss_pred EEEeeeccCccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007140 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (616)
Q Consensus 313 l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~ 371 (616)
.+..+.. ...||+++.++. ....+.-.... .....|..-+++.|||+.|++..
T Consensus 151 YVt~s~~---~~~I~rV~pdG~--~~~~~~~~~~~-~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 151 YVAFALG---MPAIARVSADGK--TVSTFAWESGN-GGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp EEEEEES---SCEEEEECTTSC--CEEEEEECCCC-SSSCCSCSEEEEETTTTEEEEES
T ss_pred EEeCCCC---CCeEEEEeCCCC--EEeeeeecCCC-cccccCcceEEEeCCCCEEEEEc
Confidence 6654421 137999999873 22222111100 00111222388999999887765
No 486
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=41.53 E-value=83 Score=29.35 Aligned_cols=20 Identities=30% Similarity=0.443 Sum_probs=14.6
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
.+.| ++||.|+. |.| | +|..
T Consensus 45 ~~~l-~~~~~vi~~Dl~-G---~G~s 65 (291)
T 3qyj_A 45 APLL-ANNFTVVATDLR-G---YGDS 65 (291)
T ss_dssp HHHH-TTTSEEEEECCT-T---STTS
T ss_pred HHHH-hCCCEEEEEcCC-C---CCCC
Confidence 4445 56999999 999 5 5654
No 487
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=40.61 E-value=28 Score=31.73 Aligned_cols=42 Identities=2% Similarity=0.023 Sum_probs=22.8
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCCccCChhH-HHHHHHHHHHHHHH
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l 593 (616)
....|+++ |.|+. |.| | +|..-....+. ....+|+.+.++.+
T Consensus 35 ~~~~L~~~-~~via~Dl~-G---~G~S~~~~~~~~~~~a~dl~~~l~~l 78 (255)
T 3bf7_A 35 LARDLVND-HNIIQVDVR-N---HGLSPREPVMNYPAMAQDLVDTLDAL 78 (255)
T ss_dssp HHHHHTTT-SCEEEECCT-T---STTSCCCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhh-CcEEEecCC-C---CCCCCCCCCcCHHHHHHHHHHHHHHc
Confidence 34566665 99999 999 6 45442221111 12345555555544
No 488
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=40.37 E-value=28 Score=32.52 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=22.1
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCccC-ChhH-HHHHHHHHHHHHHH
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKLPN-DRFV-EQLVSSAEAAVEEV 593 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~~~g-~~~~~D~~~~v~~l 593 (616)
...|+ ++|-|+. |.| | +|..-.. ..|. ....+|+.+.++.|
T Consensus 47 ~~~L~-~~~rvia~Dlr-G---hG~S~~~~~~~~~~~~a~dl~~ll~~l 90 (276)
T 2wj6_A 47 IQELD-ADFRVIVPNWR-G---HGLSPSEVPDFGYQEQVKDALEILDQL 90 (276)
T ss_dssp HHHHT-TTSCEEEECCT-T---CSSSCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHh-cCCEEEEeCCC-C---CCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 34455 6799999 999 6 5654221 2232 12334554444443
No 489
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.64 E-value=75 Score=33.62 Aligned_cols=67 Identities=4% Similarity=-0.002 Sum_probs=40.4
Q ss_pred cceeecCCCceEEEeeecc--------CccEEEEEEeCCCCCCCceEEeecccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007140 302 RSVSWCDDSLALVNETWYK--------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (616)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~--------~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~s~dgk~l~~~~~~ 373 (616)
.++.|+|+|..++.++... .+...+|.++..++ +.+.+........+. -++|+|||+.|++....
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g--~~~rf~~~P~gaE~T-----G~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGPIGCEVT-----GISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC--CEEEEEECCTTCEEE-----EEEECTTSSEEEEEEES
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC--eEEEEEeCCCCccCc-----CeeECCCCCEEEEEEEC
Confidence 4567888888766664211 13457888888773 444443221111111 18999999999988764
Q ss_pred cC
Q 007140 374 EN 375 (616)
Q Consensus 374 ~~ 375 (616)
.+
T Consensus 552 PG 553 (592)
T 3zwu_A 552 PG 553 (592)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 490
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=37.50 E-value=1.6e+02 Score=29.10 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=40.3
Q ss_pred eeEEeecCCCCCCC--CceeeecCCCC-----CcccceEEc---cC---CCeEEEEEeeccccccCCCceeEEEEECCCC
Q 007140 6 GIGIHRLLPDDSLG--PEKEVHGYPDG-----AKINFVSWS---PD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETG 72 (616)
Q Consensus 6 ~~~~~~~~~~~~~g--~~~~lt~~~~~-----~~~~~~~~S---PD---G~~iaf~~~~~~~~~~~~~~~~l~v~~~~~g 72 (616)
-|...+|+. + +..+.-.+|.. .....+++. |+ ++..||+.. .+...|.|+|+++|
T Consensus 124 kLv~~DL~t----~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD--------~~~~gLIVydl~~~ 191 (381)
T 3q6k_A 124 AIVAYDLKQ----PNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITN--------FLRGALFIYDHKKQ 191 (381)
T ss_dssp EEEEEESSS----TTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEE--------TTTTEEEEEETTTT
T ss_pred eEEEEECCC----CCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEc--------CCCCcEEEEECCCC
Confidence 466667754 4 33322225422 235567776 33 367899986 35679999999999
Q ss_pred ceEeccc
Q 007140 73 EAKPLFE 79 (616)
Q Consensus 73 ~~~~lt~ 79 (616)
+.+++..
T Consensus 192 ~swRv~~ 198 (381)
T 3q6k_A 192 DSWNVTH 198 (381)
T ss_dssp EEEEEEC
T ss_pred cEEEEcc
Confidence 9988874
No 491
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=37.34 E-value=50 Score=30.22 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=15.2
Q ss_pred hHHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 547 SSLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 547 ~~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
..+.|+++ |.|+. |.| | +|..
T Consensus 35 ~~~~L~~~-~~vi~~Dl~-G---~G~S 56 (269)
T 2xmz_A 35 HIEKFTDN-YHVITIDLP-G---HGED 56 (269)
T ss_dssp THHHHHTT-SEEEEECCT-T---STTC
T ss_pred HHHHHhhc-CeEEEecCC-C---CCCC
Confidence 35667665 99999 999 6 4544
No 492
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=36.41 E-value=44 Score=31.76 Aligned_cols=20 Identities=10% Similarity=-0.082 Sum_probs=14.5
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCC
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDK 572 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~ 572 (616)
...|+. .|-|+. |.| | +|..
T Consensus 49 ~~~L~~-~~~via~Dl~-G---~G~S 69 (316)
T 3afi_E 49 LPLVSP-VAHCIAPDLI-G---FGQS 69 (316)
T ss_dssp HHHHTT-TSEEEEECCT-T---STTS
T ss_pred HHHHhh-CCEEEEECCC-C---CCCC
Confidence 456665 499999 999 6 5554
No 493
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=36.34 E-value=46 Score=31.67 Aligned_cols=41 Identities=2% Similarity=-0.160 Sum_probs=23.2
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCccC--ChhHHHHHHHHHHHHHHHHHc
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~--~~~g~~~~~D~~~~v~~l~~~ 596 (616)
.+.|+++ |.|+. |.| | +|..-.. ..+ .++++.+.+..+++.
T Consensus 63 ~~~L~~~-~~via~Dl~-G---hG~S~~~~~~~~---~~~~~a~dl~~ll~~ 106 (318)
T 2psd_A 63 VPHIEPV-ARCIIPDLI-G---MGKSGKSGNGSY---RLLDHYKYLTAWFEL 106 (318)
T ss_dssp GGGTTTT-SEEEEECCT-T---STTCCCCTTSCC---SHHHHHHHHHHHHTT
T ss_pred HHHhhhc-CeEEEEeCC-C---CCCCCCCCCCcc---CHHHHHHHHHHHHHh
Confidence 4556655 68999 999 6 5553221 222 245555556666654
No 494
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=36.12 E-value=65 Score=29.60 Aligned_cols=16 Identities=6% Similarity=0.075 Sum_probs=12.5
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
.+.|++ +|.|+. |+| |
T Consensus 61 ~~~L~~-~~~vi~~D~~-G 77 (286)
T 2qmq_A 61 MQEIIQ-NFVRVHVDAP-G 77 (286)
T ss_dssp HHHHHT-TSCEEEEECT-T
T ss_pred hHHHhc-CCCEEEecCC-C
Confidence 455655 699999 999 7
No 495
>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5
Probab=35.08 E-value=1.7e+02 Score=27.34 Aligned_cols=118 Identities=7% Similarity=0.008 Sum_probs=59.2
Q ss_pred ceeEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEecccCcccccccCCccc------CCCCccCCCC--C-chHHHH
Q 007140 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR------GSPNEFSGMT--P-TSSLIF 551 (616)
Q Consensus 481 ~~e~i~~~~~DG~~l~g~l~~P~~~~~~kk~p~P~vv~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~-~~~q~l 551 (616)
..-.+.+....|..+.-|++....-++.++ |+++|.-+|+ +++.+- .||..+..-. . .+..-|
T Consensus 25 ~sGyv~v~~~~~~~lFywf~es~~~~p~~~---Pl~lWlnGGP-----GcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW 96 (270)
T 1gxs_A 25 YGGYVTIDDNNGRALYYWFQEADTADPAAA---PLVLWLNGGP-----GCSSIGLGAMQELGAFRVHTNGESLLLNEYAW 96 (270)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCSSCGGGS---CEEEEEECTT-----TBCTTTTHHHHTTSSEEECTTSSCEEECTTCG
T ss_pred EEEEEEcCCCCCcEEEEEEEEecCCCCCCC---CEEEEecCCC-----cccchhhhhHHhccCceecCCCCcceeCccch
Confidence 455677766667888888775523344332 8888762221 122221 1222221000 0 112224
Q ss_pred hhCCeEEEE-CCCCCccccCCCccCChh--H-HHHHHHHHHHHHHHHH-cCCccCCceEEEe
Q 007140 552 LARRFAVLA-GPSIPIIGEGDKLPNDRF--V-EQLVSSAEAAVEEVVR-RGVGLPILYLNTT 608 (616)
Q Consensus 552 a~~Gy~Vl~-n~R~GS~GyG~~f~~~~~--g-~~~~~D~~~~v~~l~~-~~~vD~~ri~~~~ 608 (616)
...-=+|+. .+. | +||...-....+ + ....+|+..+++...+ .+-.-...+.|++
T Consensus 97 ~~~anllfiDqPv-G-tGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~G 156 (270)
T 1gxs_A 97 NKAANILFAESPA-G-VGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAG 156 (270)
T ss_dssp GGTSEEEEECCST-T-STTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEE
T ss_pred hccccEEEEeccc-c-ccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEe
Confidence 445556666 699 7 576532211222 1 1345777777775444 3545555677765
No 496
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=33.57 E-value=55 Score=30.34 Aligned_cols=40 Identities=13% Similarity=0.042 Sum_probs=22.8
Q ss_pred HHHhhCCeEEEE-CCCCCccccCCCccC-C-hhHHHHHHHHHHHHHHHHHc
Q 007140 549 LIFLARRFAVLA-GPSIPIIGEGDKLPN-D-RFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 549 q~la~~Gy~Vl~-n~R~GS~GyG~~f~~-~-~~g~~~~~D~~~~v~~l~~~ 596 (616)
..|++ +|.|+. |.| | +|..-.. . .+ ..+++.+.+..+++.
T Consensus 61 ~~l~~-~~~vi~~D~~-G---~G~S~~~~~~~~---~~~~~~~~l~~~l~~ 103 (289)
T 1u2e_A 61 PLVEA-GYRVILLDCP-G---WGKSDSVVNSGS---RSDLNARILKSVVDQ 103 (289)
T ss_dssp HHHHT-TCEEEEECCT-T---STTSCCCCCSSC---HHHHHHHHHHHHHHH
T ss_pred HHHhc-CCeEEEEcCC-C---CCCCCCCCcccc---CHHHHHHHHHHHHHH
Confidence 45655 599999 999 6 4544222 1 22 345555555555543
No 497
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=32.88 E-value=1.1e+02 Score=30.95 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=29.7
Q ss_pred HhhCCeEEEE-CCCCCccccCCCccCC--------hh----HHHHHHHHHHHHHHHHHc
Q 007140 551 FLARRFAVLA-GPSIPIIGEGDKLPND--------RF----VEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 551 la~~Gy~Vl~-n~R~GS~GyG~~f~~~--------~~----g~~~~~D~~~~v~~l~~~ 596 (616)
....|+.|+. +.| | ||+..+.+ ++ -....+|+...+++|..+
T Consensus 65 A~~~~~~Vi~~DhR-g---~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~ 119 (446)
T 3n2z_B 65 AEELKAMLVFAEHR-Y---YGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRT 119 (446)
T ss_dssp HHHHTEEEEEECCT-T---STTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEEecC-C---CCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHh
Confidence 3345999999 999 4 77765421 11 245789999999998764
No 498
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=32.45 E-value=45 Score=31.27 Aligned_cols=16 Identities=19% Similarity=0.164 Sum_probs=12.6
Q ss_pred HHHHhhCCeEEEE-CCCCC
Q 007140 548 SLIFLARRFAVLA-GPSIP 565 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~G 565 (616)
.+.|+++ |.|+. |.| |
T Consensus 59 ~~~L~~~-~~vi~~Dl~-G 75 (296)
T 1j1i_A 59 IPILARH-YRVIAMDML-G 75 (296)
T ss_dssp HHHHTTT-SEEEEECCT-T
T ss_pred HHHHhhc-CEEEEECCC-C
Confidence 4566655 99999 999 6
No 499
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=31.03 E-value=39 Score=34.47 Aligned_cols=52 Identities=2% Similarity=-0.099 Sum_probs=28.4
Q ss_pred Hhh-CCeEEEE-CCCCCccccCCCccCChhH-HHHHHHHHHHHHHHHHc-CCccCCceEE
Q 007140 551 FLA-RRFAVLA-GPSIPIIGEGDKLPNDRFV-EQLVSSAEAAVEEVVRR-GVGLPILYLN 606 (616)
Q Consensus 551 la~-~Gy~Vl~-n~R~GS~GyG~~f~~~~~g-~~~~~D~~~~v~~l~~~-~~vD~~ri~~ 606 (616)
|++ .||.|+. |.| |. |.. .+....+. ....+|+.+.+++|.++ + ++.+++-+
T Consensus 95 ll~~~~~~VI~vD~~-g~-g~s-~y~~~~~~~~~~a~~l~~ll~~L~~~~g-~~~~~v~L 150 (450)
T 1rp1_A 95 MFKVEEVNCICVDWK-KG-SQT-SYTQAANNVRVVGAQVAQMLSMLSANYS-YSPSQVQL 150 (450)
T ss_dssp HTTTCCEEEEEEECH-HH-HSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCGGGEEE
T ss_pred HHhcCCeEEEEEeCc-cc-cCC-cchHHHHHHHHHHHHHHHHHHHHHHhcC-CChhhEEE
Confidence 444 5899999 999 72 221 12211111 12345677777777644 4 45566544
No 500
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=30.47 E-value=53 Score=30.14 Aligned_cols=41 Identities=7% Similarity=0.279 Sum_probs=23.0
Q ss_pred HHHHhhCCeEEEE-CCCCCccccCCCccC--ChhHHHHHHHHHHHHHHHHHc
Q 007140 548 SLIFLARRFAVLA-GPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRR 596 (616)
Q Consensus 548 ~q~la~~Gy~Vl~-n~R~GS~GyG~~f~~--~~~g~~~~~D~~~~v~~l~~~ 596 (616)
.+.| +++|.|+. |.| | +|..-.. ..+ .++++.+.+..+++.
T Consensus 35 ~~~L-~~~~~vi~~Dl~-G---~G~S~~~~~~~~---~~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 35 LAVL-EQEYQVVCYDQR-G---TGNNPDTLAEDY---SIAQMAAELHQALVA 78 (268)
T ss_dssp HHHH-HTTSEEEECCCT-T---BTTBCCCCCTTC---CHHHHHHHHHHHHHH
T ss_pred HHHH-hhcCeEEEECCC-C---CCCCCCCccccC---CHHHHHHHHHHHHHH
Confidence 3455 45799999 999 6 5554221 222 344555555555543
Done!