Query 007143
Match_columns 616
No_of_seqs 379 out of 2854
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:15:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 1E-44 3.6E-49 397.3 23.2 381 28-437 20-447 (451)
2 2ggo_A 401AA long hypothetical 100.0 8.1E-41 2.8E-45 360.7 29.1 350 29-441 1-383 (401)
3 3brk_X Glucose-1-phosphate ade 100.0 1.1E-40 3.8E-45 362.1 30.1 348 28-412 12-390 (420)
4 3st8_A Bifunctional protein GL 100.0 2.3E-39 7.7E-44 359.6 32.8 373 27-439 11-459 (501)
5 4fce_A Bifunctional protein GL 100.0 4.2E-38 1.4E-42 345.1 32.5 322 27-395 7-336 (459)
6 1hm9_A GLMU, UDP-N-acetylgluco 100.0 7.7E-38 2.6E-42 344.1 34.6 318 28-392 11-338 (468)
7 2v0h_A Bifunctional protein GL 100.0 4.9E-36 1.7E-40 328.4 33.9 319 27-395 4-333 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 1.1E-28 3.7E-33 253.3 19.0 237 28-303 2-270 (281)
9 4ecm_A Glucose-1-phosphate thy 99.9 1.4E-26 5E-31 236.2 21.7 235 26-303 22-259 (269)
10 1tzf_A Glucose-1-phosphate cyt 99.9 4.3E-26 1.5E-30 230.7 23.4 228 28-303 2-250 (259)
11 2ux8_A Glucose-1-phosphate uri 99.9 9.1E-26 3.1E-30 233.5 19.5 243 26-303 12-279 (297)
12 2e3d_A UTP--glucose-1-phosphat 99.9 2.2E-25 7.5E-30 231.1 21.8 234 28-303 8-281 (302)
13 2pa4_A UTP-glucose-1-phosphate 99.9 5.9E-25 2E-29 230.3 19.4 240 26-303 10-282 (323)
14 3pnn_A Conserved domain protei 99.9 4.4E-24 1.5E-28 221.6 22.3 256 27-305 4-293 (303)
15 1lvw_A Glucose-1-phosphate thy 99.9 4E-24 1.4E-28 221.0 21.7 228 28-301 3-240 (295)
16 1fxo_A Glucose-1-phosphate thy 99.9 3.6E-24 1.2E-28 221.1 18.7 229 28-302 2-240 (293)
17 1mc3_A Glucose-1-phosphate thy 99.9 2.8E-24 9.6E-29 222.2 15.8 228 29-302 4-241 (296)
18 2qh5_A PMI, ALGA, mannose-6-ph 99.9 1.2E-22 4.2E-27 211.2 17.6 239 27-300 3-281 (308)
19 4evw_A Nucleoside-diphosphate- 99.9 2.9E-23 1E-27 210.1 11.0 222 31-299 2-243 (255)
20 3oam_A 3-deoxy-manno-octuloson 99.9 2.7E-20 9.1E-25 188.0 22.1 243 28-303 2-249 (252)
21 1jyk_A LICC protein, CTP:phosp 99.9 1.7E-21 5.9E-26 197.0 13.0 221 27-301 24-250 (254)
22 2x65_A Mannose-1-phosphate gua 99.9 5.5E-21 1.9E-25 201.0 16.9 236 29-300 2-272 (336)
23 2cu2_A Putative mannose-1-phos 99.8 1.5E-20 5.1E-25 197.8 14.7 237 28-298 2-266 (337)
24 3tqd_A 3-deoxy-manno-octuloson 99.8 1.2E-17 4.2E-22 168.6 22.2 241 27-299 8-254 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.8 1.2E-17 4.2E-22 169.4 21.8 241 26-299 16-261 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.7 9.5E-17 3.2E-21 159.4 21.7 226 28-300 2-230 (234)
27 2xme_A CTP-inositol-1-phosphat 99.7 3.5E-17 1.2E-21 162.7 15.1 211 28-299 18-230 (232)
28 2icy_A Probable UTP-glucose-1- 99.7 4.7E-16 1.6E-20 168.9 23.1 243 27-302 78-373 (469)
29 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 4.5E-17 1.5E-21 173.7 13.7 74 133-246 13-89 (374)
30 1vic_A 3-deoxy-manno-octuloson 99.7 2.3E-15 7.8E-20 152.4 23.2 239 28-303 2-253 (262)
31 4fcu_A 3-deoxy-manno-octuloson 99.7 1.1E-15 3.7E-20 154.1 20.6 243 29-304 2-251 (253)
32 1h7e_A 3-deoxy-manno-octuloson 99.7 1.4E-15 4.8E-20 152.0 21.3 227 28-301 2-237 (245)
33 3r8y_A 2,3,4,5-tetrahydropyrid 99.7 1.8E-16 6.2E-21 158.6 13.3 168 260-439 24-212 (240)
34 3ixc_A Hexapeptide transferase 99.7 5.9E-16 2E-20 149.5 15.9 117 322-438 28-154 (191)
35 1xhd_A Putative acetyltransfer 99.7 1.1E-15 3.8E-20 145.1 16.2 112 326-437 11-131 (173)
36 3tv0_A Dynactin subunit 6; LEF 99.7 1.1E-15 3.6E-20 148.1 16.1 115 324-438 9-144 (194)
37 3r3r_A Ferripyochelin binding 99.7 1E-15 3.5E-20 147.0 15.7 116 323-438 11-142 (187)
38 3c8v_A Putative acetyltransfer 99.7 1.6E-16 5.5E-21 173.5 10.2 111 328-438 274-390 (496)
39 1v3w_A Ferripyochelin binding 99.6 2E-15 6.7E-20 143.4 15.8 112 326-437 9-129 (173)
40 3vbi_A ANTD, galactoside O-ace 99.6 1.2E-15 4.1E-20 148.9 13.7 105 326-430 31-168 (205)
41 3r1w_A Carbonic anhydrase; bet 99.6 2.4E-15 8.1E-20 144.6 15.2 113 326-438 18-146 (189)
42 2pig_A Putative transferase; S 99.6 1.6E-15 5.4E-20 158.2 11.0 142 284-430 25-195 (334)
43 3mqg_A Lipopolysaccharides bio 99.6 1.2E-14 4.1E-19 140.2 15.8 116 324-439 12-149 (192)
44 2ggo_A 401AA long hypothetical 99.6 2.3E-14 7.7E-19 153.9 15.4 116 322-437 257-391 (401)
45 3kwd_A Carbon dioxide concentr 99.6 4.3E-14 1.5E-18 138.7 15.5 102 327-429 39-161 (213)
46 3r0s_A Acyl-[acyl-carrier-prot 99.6 6.8E-14 2.3E-18 142.1 17.4 116 324-439 31-169 (266)
47 4eqy_A Acyl-[acyl-carrier-prot 99.6 5E-14 1.7E-18 144.4 16.2 77 363-439 101-186 (283)
48 3mqg_A Lipopolysaccharides bio 99.5 8.3E-14 2.8E-18 134.3 16.0 111 327-437 9-137 (192)
49 3r0s_A Acyl-[acyl-carrier-prot 99.5 1.2E-13 4.2E-18 140.2 17.9 117 322-438 11-150 (266)
50 4e6u_A Acyl-[acyl-carrier-prot 99.5 1E-13 3.4E-18 140.7 17.1 117 323-439 33-171 (265)
51 4eqy_A Acyl-[acyl-carrier-prot 99.5 9.1E-14 3.1E-18 142.5 17.0 118 322-439 29-168 (283)
52 1j2z_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.8E-18 140.8 17.2 99 324-422 10-130 (270)
53 2dpw_A Hypothetical protein TT 99.5 1E-14 3.5E-19 145.0 8.9 203 28-295 2-231 (232)
54 1qre_A Carbonic anhydrase; bet 99.5 8.3E-14 2.8E-18 139.9 15.3 102 327-429 59-190 (247)
55 3hsq_A Acyl-[acyl-carrier-prot 99.5 1.9E-13 6.6E-18 138.2 17.9 51 327-377 12-63 (259)
56 2xwl_A 2-C-methyl-D-erythritol 99.5 4.6E-13 1.6E-17 131.5 20.1 208 28-301 2-218 (223)
57 3hsq_A Acyl-[acyl-carrier-prot 99.5 1.7E-13 5.7E-18 138.6 16.8 119 321-439 24-164 (259)
58 2i5k_A UTP--glucose-1-phosphat 99.5 4.7E-13 1.6E-17 146.2 21.5 193 26-250 90-322 (488)
59 4e6u_A Acyl-[acyl-carrier-prot 99.5 2.1E-13 7.1E-18 138.4 17.5 118 322-439 14-153 (265)
60 1ezi_A CMP-N-acetylneuraminic 99.5 1.5E-13 5E-18 136.0 15.9 209 27-300 3-222 (228)
61 2vsh_A TARI, 2-C-methyl-D-eryt 99.5 1.8E-13 6.2E-18 135.6 15.9 214 29-300 3-232 (236)
62 3kwd_A Carbon dioxide concentr 99.5 2.3E-13 7.9E-18 133.5 15.9 108 322-436 52-179 (213)
63 2qia_A UDP-N-acetylglucosamine 99.5 3.3E-13 1.1E-17 136.6 17.6 104 325-428 15-140 (262)
64 3fs8_A QDTC; acetyltransferase 99.5 3.7E-13 1.3E-17 136.9 17.1 116 323-438 16-148 (273)
65 2qia_A UDP-N-acetylglucosamine 99.5 4.7E-13 1.6E-17 135.5 16.9 119 321-439 29-169 (262)
66 1j2z_A Acyl-[acyl-carrier-prot 99.5 3.9E-13 1.3E-17 136.8 16.4 119 321-439 25-165 (270)
67 3gos_A 2,3,4,5-tetrahydropyrid 99.5 2.3E-13 7.8E-18 138.8 14.3 108 330-438 101-219 (276)
68 3eg4_A 2,3,4,5-tetrahydropyrid 99.5 1.2E-13 4.1E-18 142.5 12.2 109 330-439 126-245 (304)
69 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 1.1E-12 3.7E-17 138.0 18.9 69 326-394 108-178 (341)
70 3fs8_A QDTC; acetyltransferase 99.5 7.3E-13 2.5E-17 134.8 17.0 102 329-430 4-122 (273)
71 3jqy_B NEUO, polysialic acid O 99.5 1.8E-13 6E-18 137.9 12.1 104 326-429 62-196 (252)
72 3rsb_A Adenosylcobinamide-phos 99.5 1.3E-13 4.4E-18 133.0 10.3 117 29-155 1-119 (196)
73 3r5d_A Tetrahydrodipicolinate 99.5 6E-14 2.1E-18 143.2 8.2 105 330-437 181-295 (347)
74 3bfp_A Acetyltransferase; LEFT 99.5 8E-13 2.8E-17 127.7 15.8 94 336-429 78-176 (194)
75 4ea9_A Perosamine N-acetyltran 99.5 7.5E-13 2.6E-17 130.4 15.6 93 337-429 103-198 (220)
76 4e79_A UDP-3-O-acylglucosamine 99.5 8.9E-13 3.1E-17 139.4 16.9 66 329-394 116-183 (357)
77 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1.2E-12 4.3E-17 139.0 17.9 98 328-425 150-273 (372)
78 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 2E-13 6.9E-18 141.3 11.5 108 329-437 141-259 (316)
79 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1.4E-12 4.7E-17 138.6 18.0 113 326-438 130-268 (372)
80 3eg4_A 2,3,4,5-tetrahydropyrid 99.4 2.3E-13 7.8E-18 140.4 11.6 112 325-437 139-268 (304)
81 1qwj_A Cytidine monophospho-N- 99.4 1.2E-12 3.9E-17 129.8 16.3 206 28-301 3-220 (229)
82 2wlg_A Polysialic acid O-acety 99.4 4.6E-13 1.6E-17 131.5 13.2 105 326-430 35-171 (215)
83 3t57_A UDP-N-acetylglucosamine 99.4 1.4E-12 4.8E-17 135.1 17.4 51 327-377 19-70 (305)
84 1qre_A Carbonic anhydrase; bet 99.4 1.1E-12 3.8E-17 131.6 16.0 105 325-436 75-208 (247)
85 4e79_A UDP-3-O-acylglucosamine 99.4 1.4E-12 4.7E-17 137.9 17.2 101 326-426 131-257 (357)
86 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 1.3E-12 4.4E-17 137.4 16.9 104 325-428 125-254 (341)
87 3f1c_A Putative 2-C-methyl-D-e 99.4 2.8E-12 9.7E-17 128.5 18.1 121 28-156 3-133 (246)
88 3fsy_A Tetrahydrodipicolinate 99.4 2.4E-13 8.2E-18 137.8 10.0 104 330-436 158-271 (332)
89 2yc3_A 2-C-methyl-D-erythritol 99.4 4.4E-12 1.5E-16 125.1 18.5 117 28-156 4-126 (228)
90 1vgw_A 4-diphosphocytidyl-2C-m 99.4 4.1E-12 1.4E-16 125.5 18.2 118 27-155 5-131 (231)
91 4fce_A Bifunctional protein GL 99.4 1.9E-12 6.7E-17 141.1 16.7 71 323-394 282-353 (459)
92 3nz2_A Hexapeptide-repeat cont 99.4 2.3E-13 7.7E-18 131.8 7.7 109 329-437 58-177 (195)
93 3gos_A 2,3,4,5-tetrahydropyrid 99.4 1.4E-12 4.7E-17 133.0 13.8 103 327-435 116-235 (276)
94 1xhd_A Putative acetyltransfer 99.4 2.6E-12 8.8E-17 121.8 14.8 101 324-429 27-135 (173)
95 3t57_A UDP-N-acetylglucosamine 99.4 3.6E-12 1.2E-16 131.9 17.1 74 321-394 31-123 (305)
96 1v3w_A Ferripyochelin binding 99.4 2E-12 6.8E-17 122.6 13.9 100 324-423 25-133 (173)
97 3ixc_A Hexapeptide transferase 99.4 2.9E-12 1E-16 123.5 15.1 98 323-425 47-153 (191)
98 1jv1_A Glcnac1P uridyltransfer 99.4 4.2E-12 1.4E-16 139.2 16.7 199 27-251 101-344 (505)
99 3r3r_A Ferripyochelin binding 99.4 3E-12 1E-16 122.7 13.6 72 323-394 29-115 (187)
100 3vbi_A ANTD, galactoside O-ace 99.4 2.7E-12 9.3E-17 124.9 13.4 131 302-439 27-181 (205)
101 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 7.6E-12 2.6E-16 133.2 17.2 44 334-377 161-205 (374)
102 3tk8_A 2,3,4,5-tetrahydropyrid 99.4 3.4E-12 1.2E-16 132.1 13.8 108 327-435 151-276 (316)
103 1hm9_A GLMU, UDP-N-acetylgluco 99.4 2.6E-12 8.8E-17 140.7 13.6 69 325-395 290-359 (468)
104 2v0h_A Bifunctional protein GL 99.4 2.5E-12 8.6E-17 140.1 13.4 71 324-395 280-351 (456)
105 2wee_A MOBA-related protein; u 99.4 2.8E-12 9.5E-17 123.3 11.8 111 27-152 4-120 (197)
106 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 7.5E-12 2.6E-16 125.0 15.2 90 323-412 99-199 (240)
107 3tv0_A Dynactin subunit 6; LEF 99.4 9.7E-12 3.3E-16 120.1 15.3 106 323-439 26-151 (194)
108 3r1w_A Carbonic anhydrase; bet 99.4 5.5E-12 1.9E-16 121.0 13.4 99 323-426 33-146 (189)
109 2waw_A MOBA relate protein; un 99.3 3.8E-12 1.3E-16 122.5 11.4 112 27-152 4-120 (199)
110 3hjj_A Maltose O-acetyltransfe 99.3 5.6E-12 1.9E-16 121.4 12.2 108 330-437 60-179 (190)
111 4ea9_A Perosamine N-acetyltran 99.3 1.9E-11 6.5E-16 120.3 14.9 104 329-439 107-212 (220)
112 1vpa_A 2-C-methyl-D-erythritol 99.3 9.2E-11 3.2E-15 116.0 19.1 119 26-156 11-135 (234)
113 3bfp_A Acetyltransferase; LEFT 99.3 3.1E-11 1E-15 116.6 15.1 107 326-439 80-190 (194)
114 3c8v_A Putative acetyltransfer 99.3 1.9E-11 6.6E-16 133.4 12.1 105 324-430 288-394 (496)
115 2px7_A 2-C-methyl-D-erythritol 99.2 6.9E-11 2.4E-15 117.6 14.9 114 21-156 18-134 (236)
116 3q1x_A Serine acetyltransferas 99.2 3.4E-11 1.1E-15 124.1 11.3 94 332-431 162-258 (313)
117 3srt_A Maltose O-acetyltransfe 99.2 3.8E-11 1.3E-15 115.4 10.8 101 330-430 59-166 (188)
118 3nz2_A Hexapeptide-repeat cont 99.2 6.8E-11 2.3E-15 114.3 11.9 76 362-437 76-167 (195)
119 2rij_A Putative 2,3,4,5-tetrah 99.2 5.5E-11 1.9E-15 124.9 11.8 141 282-438 169-330 (387)
120 3ftt_A Putative acetyltransfer 99.2 6.4E-11 2.2E-15 114.9 11.3 109 331-439 58-177 (199)
121 2pig_A Putative transferase; S 99.2 4.5E-11 1.5E-15 124.6 10.7 90 327-416 46-137 (334)
122 3fsy_A Tetrahydrodipicolinate 99.2 9.1E-11 3.1E-15 119.0 12.0 84 333-417 173-270 (332)
123 3r5d_A Tetrahydrodipicolinate 99.2 5.9E-11 2E-15 121.3 10.7 65 329-394 198-271 (347)
124 1krr_A Galactoside O-acetyltra 99.2 1.1E-10 3.8E-15 113.3 11.9 110 330-439 58-178 (203)
125 4hur_A Virginiamycin A acetylt 99.2 3.4E-11 1.2E-15 118.6 8.4 109 328-438 30-165 (220)
126 3hjj_A Maltose O-acetyltransfe 99.2 2.1E-10 7.4E-15 110.3 13.6 76 362-437 78-169 (190)
127 3jqy_B NEUO, polysialic acid O 99.1 1.3E-10 4.4E-15 116.9 11.2 107 326-439 84-210 (252)
128 3jui_A Translation initiation 99.1 2.2E-12 7.4E-17 123.0 -1.7 49 561-609 9-57 (182)
129 1ocx_A Maltose O-acetyltransfe 99.1 1.1E-10 3.7E-15 111.6 9.9 105 333-437 58-173 (182)
130 2p2o_A Maltose transacetylase; 99.1 1E-10 3.4E-15 112.1 9.6 107 331-437 58-175 (185)
131 2oeg_A UTP-glucose-1-phosphate 99.1 6.2E-11 2.1E-15 129.3 9.2 136 28-173 75-250 (505)
132 3ftt_A Putative acetyltransfer 99.1 1.2E-10 3.9E-15 113.0 10.0 76 362-437 74-165 (199)
133 3d5n_A Q97W15_sulso; NESG, SSR 99.1 6.5E-11 2.2E-15 114.4 8.0 106 28-153 2-112 (197)
134 1i52_A 4-diphosphocytidyl-2-C- 99.1 6.3E-11 2.1E-15 117.6 7.9 116 27-155 6-126 (236)
135 1krr_A Galactoside O-acetyltra 99.1 3.3E-10 1.1E-14 110.0 12.6 76 362-437 75-166 (203)
136 3st8_A Bifunctional protein GL 99.1 3.6E-10 1.2E-14 124.9 13.6 113 323-435 279-432 (501)
137 3q1x_A Serine acetyltransferas 99.1 1.2E-10 4E-15 120.0 8.5 86 326-411 162-256 (313)
138 1e5k_A Molybdopterin-guanine d 99.1 2.3E-10 7.9E-15 111.0 10.1 106 28-152 6-116 (201)
139 3oc9_A UDP-N-acetylglucosamine 99.1 1.3E-09 4.4E-14 115.5 16.4 198 26-249 33-275 (405)
140 1yp2_A Glucose-1-phosphate ade 99.1 1.5E-10 5E-15 126.2 9.4 100 328-434 331-450 (451)
141 3brk_X Glucose-1-phosphate ade 99.1 2.3E-10 7.7E-15 123.6 10.2 88 342-431 299-391 (420)
142 2p2o_A Maltose transacetylase; 99.1 6.7E-10 2.3E-14 106.3 11.2 76 362-437 74-165 (185)
143 1ssq_A SAT, serine acetyltrans 99.0 6.9E-10 2.4E-14 111.9 11.5 94 334-439 138-236 (267)
144 1ocx_A Maltose O-acetyltransfe 99.0 7E-10 2.4E-14 105.9 10.8 76 362-437 72-163 (182)
145 3f1x_A Serine acetyltransferas 99.0 9.6E-10 3.3E-14 113.0 12.5 45 395-439 250-298 (310)
146 3srt_A Maltose O-acetyltransfe 99.0 1.6E-09 5.5E-14 104.0 13.0 76 362-437 76-167 (188)
147 1t3d_A SAT, serine acetyltrans 99.0 9.9E-10 3.4E-14 111.7 11.1 28 130-157 39-68 (289)
148 2e8b_A Probable molybdopterin- 99.0 3.1E-10 1.1E-14 109.9 7.0 102 28-150 14-120 (201)
149 3mc4_A WW/RSP5/WWP domain:bact 99.0 1E-09 3.4E-14 111.5 10.9 35 396-430 216-250 (287)
150 3f1x_A Serine acetyltransferas 99.0 9.4E-10 3.2E-14 113.1 10.6 39 399-437 248-286 (310)
151 3mc4_A WW/RSP5/WWP domain:bact 99.0 1.4E-09 4.6E-14 110.5 11.5 42 333-379 164-207 (287)
152 2yqc_A UDP-N-acetylglucosamine 99.0 3.6E-09 1.2E-13 115.6 15.3 196 27-249 102-351 (486)
153 3q80_A 2-C-methyl-D-erythritol 99.0 4.6E-09 1.6E-13 104.1 14.1 112 28-155 7-127 (231)
154 3eev_A Chloramphenicol acetylt 99.0 9.9E-10 3.4E-14 107.5 8.6 77 362-438 58-157 (212)
155 2rij_A Putative 2,3,4,5-tetrah 99.0 1.5E-09 5E-14 114.1 9.8 98 338-439 216-325 (387)
156 3ngw_A Molybdopterin-guanine d 98.9 4.3E-09 1.5E-13 102.6 11.9 107 29-155 1-110 (208)
157 2wlg_A Polysialic acid O-acety 98.9 3.4E-09 1.2E-13 103.8 10.8 33 346-378 80-116 (215)
158 4e8l_A Virginiamycin A acetylt 98.9 1.5E-09 5E-14 106.7 8.0 79 351-429 53-151 (219)
159 1w55_A ISPD/ISPF bifunctional 98.9 2.2E-09 7.7E-14 113.6 9.7 110 28-155 3-116 (371)
160 4hur_A Virginiamycin A acetylt 98.9 3.3E-09 1.1E-13 104.3 10.0 40 399-438 116-155 (220)
161 1paq_A Translation initiation 98.9 1E-10 3.5E-15 112.2 -0.9 47 563-609 19-65 (189)
162 1mr7_A Streptogramin A acetylt 98.9 1.1E-09 3.8E-14 106.8 4.9 97 332-429 28-146 (209)
163 1xat_A Xenobiotic acetyltransf 98.8 6.3E-09 2.2E-13 101.6 8.0 69 361-429 55-143 (212)
164 1t3d_A SAT, serine acetyltrans 98.8 1.7E-08 5.7E-13 102.7 10.5 83 334-429 158-242 (289)
165 1ssq_A SAT, serine acetyltrans 98.7 2.7E-08 9.3E-13 100.2 10.2 28 130-157 19-48 (267)
166 4e8l_A Virginiamycin A acetylt 98.7 2.8E-08 9.7E-13 97.5 7.1 38 400-437 116-153 (219)
167 3eev_A Chloramphenicol acetylt 98.7 4.7E-08 1.6E-12 95.5 8.7 40 398-437 107-146 (212)
168 1xat_A Xenobiotic acetyltransf 98.5 3.5E-07 1.2E-11 89.2 9.9 39 399-437 107-145 (212)
169 1mr7_A Streptogramin A acetylt 98.5 8.5E-08 2.9E-12 93.4 4.9 37 401-437 112-148 (209)
170 3r3i_A UTP--glucose-1-phosphat 97.6 0.0018 6.2E-08 70.4 18.6 71 25-98 124-201 (528)
171 2i5e_A Hypothetical protein MM 96.7 0.0035 1.2E-07 60.4 7.8 105 27-151 2-111 (211)
172 3gue_A UTP-glucose-1-phosphate 96.0 0.048 1.6E-06 58.8 12.4 67 28-97 76-149 (484)
173 3ogz_A UDP-sugar pyrophosphory 95.3 0.098 3.3E-06 57.9 11.8 64 28-94 114-183 (630)
174 1ug3_A EIF4GI, eukaryotic prot 74.7 0.27 9.3E-06 50.8 -2.7 43 567-609 208-250 (339)
175 3cgx_A Putative nucleotide-dip 73.5 8.3 0.00028 37.5 7.9 86 59-154 37-129 (242)
176 1qg8_A Protein (spore coat pol 58.0 66 0.0023 30.2 10.9 98 53-156 6-116 (255)
177 1xhb_A Polypeptide N-acetylgal 35.0 1.5E+02 0.0051 31.0 10.1 96 53-156 34-142 (472)
178 3bcv_A Putative glycosyltransf 31.2 2.6E+02 0.009 25.4 10.3 93 53-155 10-111 (240)
179 2d7i_A Polypeptide N-acetylgal 29.0 2.3E+02 0.008 30.6 10.6 95 53-156 117-224 (570)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=1e-44 Score=397.30 Aligned_cols=381 Identities=18% Similarity=0.242 Sum_probs=270.8
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCe-ehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCC-----C
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNV-PMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQ-----P 101 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~-PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~-----~ 101 (616)
.|+|||||+|+|+||+|||..+||+|+||+|+ |||+|+|+.|..+|+++|+|+++++.+++.+|+.+ .|... .
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~-~~~~~~~~~~~ 98 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSR-AYASNMGGYKN 98 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHH-HCC--------
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhh-hhhcccccccc
Confidence 58999999999999999999999999999998 99999999999999999999999988899999875 23100 0
Q ss_pred CcEEEEEe--CC-----CccCHHHHHHHHHhccccc----CCEEEEeCceecchhHHHHHHHHHHhhccCCCceEEEEEe
Q 007143 102 NFTVKTIE--SH-----NIISAGDALRLIYEQNVIH----GDFVLISGDTVSNMLLTQALQEHKERKKKDNNAVMTMIIK 170 (616)
Q Consensus 102 ~~~i~~i~--~~-----~~~~~gdalr~~~~~~~i~----~dfLlv~gD~i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~ 170 (616)
.-.+.++. +. ...|++++++... ..+. ++||+++||++++.+|.++++.|+++ ++.+|+++.
T Consensus 99 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~--~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~tl~~~ 171 (451)
T 1yp2_A 99 EGFVEVLAAQQSPENPDWFQGTADAVRQYL--WLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRET-----DADITVAAL 171 (451)
T ss_dssp CCEEEEEESCSSTTSCCCCCSHHHHHHHTH--HHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHT-----TCSEEEEEE
T ss_pred cCcEEEecccccccccccccCcHHHHHHHH--HHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHc-----CCcEEEEEE
Confidence 01133332 11 1479999998643 3333 44999999999999999999999875 467888877
Q ss_pred cCCCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCC-CcceEeehHhhhcCCceEE-EeccccceeEeeCHhHH-hh
Q 007143 171 KSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHS-KGTICLDKMLLAENPSISL-HNDKQDCYIDICSPEVL-SL 247 (616)
Q Consensus 171 ~~~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~-~~~~~l~~~l~~~~~~~~i-r~dl~d~gIyIcsp~vl-~l 247 (616)
+.... ...+++ ++.+|. +++|+.|.|||... ...+.++..+|..++.... .+++.++|||+|++++| .+
T Consensus 172 ~~~~~---~~~~~g----~v~~d~-~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~ 243 (451)
T 1yp2_A 172 PMDEK---RATAFG----LMKIDE-EGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNL 243 (451)
T ss_dssp EECHH---HHTTSE----EEEECT-TSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHH
T ss_pred EcChh---hcccCC----EEEECC-CCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHH
Confidence 65311 234666 778874 78999999998521 1224455666654332111 24688999999999998 46
Q ss_pred hhcCCCh-hhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhccccccccCCCcccCCCcceeeec
Q 007143 248 FTDNFDY-QHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRATKLERR 326 (616)
Q Consensus 248 f~dnfd~-q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~~~~~~ 326 (616)
+.+.+.. .....++++.++. .|.+++++.++ +||.+++++++|..++++++.++. |...+.... .....
T Consensus 244 l~~~~~~~~~~~~~~l~~~i~---~g~~v~~~~~~-~~w~digt~~~l~~a~~~l~~~~~----~~~~~~~~~--~~i~~ 313 (451)
T 1yp2_A 244 LRDKFPGANDFGSEVIPGATS---LGMRVQAYLYD-GYWEDIGTIEAFYNANLGITKKPV----PDFSFYDRS--APIYT 313 (451)
T ss_dssp HHTTCTTCCCTTTTHHHHHHH---TTCCEEEEECC-SCCEECSSHHHHHHHHHGGGCSSS----CSSCSCCSS--SCCCC
T ss_pred HHhhcccccchHhhHHHHHHh---cCCceEEEEeC-CEEEECCCHHHHHHHHHHHhcccc----cchhccCCC--Ceecc
Confidence 6654321 1112244443332 35799999986 899999999999999999998873 111111110 01112
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCC-------------------CE
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDN-------------------VI 387 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~-------------------v~ 387 (616)
.+.+++++.| .++.| .++.||++|.|+. +.|.+++||++|.||++|+|.++++..+ +.
T Consensus 314 ~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 390 (451)
T 1yp2_A 314 QPRYLPPSKM-LDADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIG 390 (451)
T ss_dssp CCCCCCCEEE-EEEEE-EEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSE
T ss_pred CCccCCCeEE-cceEE-eCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEE
Confidence 3345555555 45667 5688999999986 8888999999999999999999888888 99
Q ss_pred ECCCcEEeceEECCCcEECCCCEECCCC------EECCCcEECCCC-EECCCCEEcc
Q 007143 388 IEDGCELRHVIVCDGVIMKAGAVLKPGV------VLSFKVVIGERF-VVPAHSKVSL 437 (616)
Q Consensus 388 Ig~~~~I~~siIg~~v~Ig~~~~I~~g~------vIg~~v~Ig~~~-~v~~~~~v~~ 437 (616)
||++|.|.+++||++|+||++++|..++ +||++|.||+++ +|+++++|+.
T Consensus 391 Ig~~~~i~~~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~a 447 (451)
T 1yp2_A 391 IGKNCHIKRAIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPS 447 (451)
T ss_dssp ECTTCEEESEEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEECT
T ss_pred ECCCCEEeccEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCCEEEECCCcEECC
Confidence 9999999999999999999999999753 456666665554 3555555554
No 2
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=8.1e-41 Score=360.67 Aligned_cols=350 Identities=17% Similarity=0.247 Sum_probs=267.5
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKTI 108 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~i 108 (616)
|+|||||+|.|+||+|+|...||+|+|++|+|||+|+|+.|..+|+++|+|++++. +++|+.+... .+.++
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~------~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK------EISIV 71 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT------TCEEE
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC------cEEEE
Confidence 68999999999999999999999999999999999999999999999999999876 7777765321 24556
Q ss_pred eCCC-ccCHHHHHHHHHhcccccCCEEEEeCceecc--hhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCC
Q 007143 109 ESHN-IISAGDALRLIYEQNVIHGDFVLISGDTVSN--MLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGT 185 (616)
Q Consensus 109 ~~~~-~~~~gdalr~~~~~~~i~~dfLlv~gD~i~~--~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~ 185 (616)
.++. ..|++.+++.+ .. .++||++.||+++. .+|+.+++ + +.+|+++.+.. +..+++
T Consensus 72 ~~~~~~~g~~~~l~~~--~~--~~~~lv~~~D~~~~~~~~~~~l~~----~------~~~~i~~~~~~-----~~~~~~- 131 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSA--KF--NDEALIIYGDLFFSNEKEICNIIT----L------KENAIIGVKVS-----NPKDYG- 131 (401)
T ss_dssp ECCTTCCBSTTTGGGC--CC--SSEEEEEETTEEESCSHHHHHHTT----C------SSEEEEEEECS-----CCSSSC-
T ss_pred eCCCCCCChHHHHHHh--cc--CCCEEEEeCccccccHHHHHHHHH----h------cCCEEEEEEcC-----CCccee-
Confidence 5655 67888888743 22 45599999999766 67887775 1 34566666543 233455
Q ss_pred CceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCC-----ChhhHHHH
Q 007143 186 DELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNF-----DYQHLRRH 260 (616)
Q Consensus 186 ~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnf-----d~q~lr~d 260 (616)
++.++. +++++.+.++|..+ ++++.++|||+++|++++.+.... ++ .+ .+
T Consensus 132 ---~v~~~~-~g~v~~~~ek~~~~-------------------~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~-~~-~~ 186 (401)
T 2ggo_A 132 ---VLVLDN-QNNLSKIIEKPEIP-------------------PSNLINAGIYKLNSDIFTYLDKISISERGEL-EL-TD 186 (401)
T ss_dssp ---EEEECT-TSSEEEEECSCSSC-------------------SCSEEEEEEEEEETHHHHHHHHSCCCSSSCB-CH-HH
T ss_pred ---EEEECC-CCeEEEEEECCCCC-------------------CCcEEEEEEEEEcHHHHHHhhhcCcCCCCce-EH-HH
Confidence 666664 68999999887421 246788999999999998875421 11 11 24
Q ss_pred hhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhccccccccCCCcccCCCcceeeecceEEcCCcEECCCC
Q 007143 261 FVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRATKLERRGMYRALEIEQSRSA 340 (616)
Q Consensus 261 fv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~~~~~~~i~~~~~v~i~~~~ 340 (616)
+++.+ . .+.+++++..+ ++|.+|+++++|..+++.++.+|.+|..+ .... +.....+++++++++.|++++
T Consensus 187 ~~~~~-~---~g~~v~~~~~~-~~~~dI~t~edl~~a~~~l~~~~~~~~~~-~~i~---~~~~i~~~~~ig~~~~I~~~~ 257 (401)
T 2ggo_A 187 AINLM-A---KDHRVKVIEYE-GYWMDIGKPWNIIDVNKWALDNLVFSQNL-GNVE---DNVKIKGKVIIEEDAEIKSGT 257 (401)
T ss_dssp HHHHH-H---HHSCEEEEECC-SCEEECCSHHHHHHHHHHHHHHTCCCEEC-SEEC---SSCEEESCEEECTTCEECTTC
T ss_pred HHHHH-H---CCCcEEEEEec-ceEEcCCCHHHHHHHHHHHHHhccccccc-ceeC---CCCEEcCCeEEcCCCEECCCC
Confidence 44433 2 35678888886 69999999999999999999998766321 1111 223455678888888888888
Q ss_pred EECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECCCCEEC-------
Q 007143 341 QVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKAGAVLK------- 412 (616)
Q Consensus 341 ~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~------- 412 (616)
.|.+++.||++|.|+++++|+ +++||++|.||++|.|.+++|++++.|+.++.|.+++||++|+||++++|.
T Consensus 258 ~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~ 337 (401)
T 2ggo_A 258 YIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEK 337 (401)
T ss_dssp EEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCS
T ss_pred EEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCC
Confidence 888888999999999999886 788999999999999988999999999888888888888888888888886
Q ss_pred -----------------CCCEECCCcEECCCCEECCCCEEccccCC
Q 007143 413 -----------------PGVVLSFKVVIGERFVVPAHSKVSLLQQP 441 (616)
Q Consensus 413 -----------------~g~vIg~~v~Ig~~~~v~~~~~v~~~~~~ 441 (616)
.+++||++|.||++++|.+|++|+....+
T Consensus 338 ~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi 383 (401)
T 2ggo_A 338 EVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARI 383 (401)
T ss_dssp CCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEE
Confidence 36777777777777777777776654433
No 3
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-40 Score=362.13 Aligned_cols=348 Identities=16% Similarity=0.173 Sum_probs=228.2
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCe-ehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCC---CCc
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNV-PMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQ---PNF 103 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~-PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~---~~~ 103 (616)
.|+|||||+|.|+||+|||...||+|+|++|+ |||+|+|+.|..+|+++|+|+++++.+++++|+.+. |... ...
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~-~~~~~~~~~~ 90 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRG-WDFFRPERNE 90 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH-SCCCCGGGTC
T ss_pred ceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhh-hccccccccC
Confidence 48999999999999999999999999999999 999999999999999999999998889999999763 4211 011
Q ss_pred EEEEEeCC----Cc---cCHHHHHHHHHhccccc----CCEEEEeCceecchhHHHHHHHHHHhhccCCCceEEEEEecC
Q 007143 104 TVKTIESH----NI---ISAGDALRLIYEQNVIH----GDFVLISGDTVSNMLLTQALQEHKERKKKDNNAVMTMIIKKS 172 (616)
Q Consensus 104 ~i~~i~~~----~~---~~~gdalr~~~~~~~i~----~dfLlv~gD~i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~ 172 (616)
.+.++... .. .|++++++.. ...+. ++||+++||++++.+|.++++.|+++ ++.+|+++.+.
T Consensus 91 ~v~i~~~~~~~~~~~~~~Gt~~al~~a--~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~tl~~~~~ 163 (420)
T 3brk_X 91 SFDILPASQRVSETQWYEGTADAVYQN--IDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDS-----GADVTIGCLEV 163 (420)
T ss_dssp EEEEECCC-------CCCCHHHHHHTT--HHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHT-----TCSEEEEEEEE
T ss_pred CEEEeCccccccCCccccCCHHHHHHH--HHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHc-----CCeEEEEEeec
Confidence 24444321 12 7999999853 23333 45999999999999999999999875 36778887765
Q ss_pred CCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcC
Q 007143 173 KPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDN 251 (616)
Q Consensus 173 ~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dn 251 (616)
... +..+++ ++.+|. +++|+.|.+||....... . .+ .+.+.++|||+|++++| .++...
T Consensus 164 ~~~---~~~~~g----~v~~d~-~g~v~~~~ekp~~~~~~~-------~-~~----~~~~~~~Giy~~~~~~l~~~l~~~ 223 (420)
T 3brk_X 164 PRM---EATGFG----VMHVNE-KDEIIDFIEKPADPPGIP-------G-NE----GFALASMGIYVFHTKFLMEAVRRD 223 (420)
T ss_dssp ETT---GGGGSE----EEEECT-TSBEEEEEESCSSCCCBT-------T-BT----TEEEEEEEEEEEEHHHHHHHHTSS
T ss_pred Ccc---ccCccc----EEEECC-CCcEEEeEeCCCcccccc-------c-cc----cceEEeeeeEEEeHHHHHHHHHHh
Confidence 322 345676 777774 689999999885322110 0 01 24678899999999987 466542
Q ss_pred CChhhHHHHhhhhhhhccccCceEEEEEcc----------ccchhhccChhhHHHHhhhhhccccccccCCCcccCCCcc
Q 007143 252 FDYQHLRRHFVKGLLLDDIMGYKIFTHEIH----------SSYAARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRAT 321 (616)
Q Consensus 252 fd~q~lr~dfv~~~l~~~i~g~~I~~~~~~----------~~y~~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~ 321 (616)
+.......+|..++++..+...+++++.++ ++||.+|+++++|..++++++.+|.+... ....
T Consensus 224 ~~~~~~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~-----~~~~-- 296 (420)
T 3brk_X 224 AADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDI-----YDKS-- 296 (420)
T ss_dssp CCC----------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCT-----TCCS--
T ss_pred cccCCccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhc-----CCCC--
Confidence 221110123333444333322389999992 47999999999999999999998753211 1110
Q ss_pred eeeecceEEcCCcEECC-----CCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEec
Q 007143 322 KLERRGMYRALEIEQSR-----SAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRH 396 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~-----~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~ 396 (616)
.......++++.+.+++ ++.+ .++.||++|.| +++.|.+|+||++|.||++|.|.+|+||+++.||.+|.|.+
T Consensus 297 ~~i~~~~~i~~~~~i~~~~~~~~~~i-~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~ 374 (420)
T 3brk_X 297 WPIWTYAEITPPAKFVHDDEDRRGSA-VSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSN 374 (420)
T ss_dssp SCCCCCCCCCCCCEEECBCSSCBCEE-ESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEE
T ss_pred CceeeccccCCCcEEecccccCCcEe-cCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEec
Confidence 00111222333333333 3444 45555666666 55555556666666666666666666666666666666655
Q ss_pred eEECCCcEECCCCEEC
Q 007143 397 VIVCDGVIMKAGAVLK 412 (616)
Q Consensus 397 siIg~~v~Ig~~~~I~ 412 (616)
++||++|.||++++|.
T Consensus 375 ~~ig~~~~i~~~~~i~ 390 (420)
T 3brk_X 375 VVIDHGVVIPEGLIVG 390 (420)
T ss_dssp EEECTTCEECTTCEES
T ss_pred eEECCCCEECCCCEEe
Confidence 5555555555555554
No 4
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=2.3e-39 Score=359.63 Aligned_cols=373 Identities=14% Similarity=0.136 Sum_probs=259.3
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhc--CCCCCCCcE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENS--EWFSQPNFT 104 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~--~~~~~~~~~ 104 (616)
..+.+||||||+||||+|+| ||+|+||+|+|||+|+|+.|.++|+++|+|+++++.++|++|+.+. .| +.+
T Consensus 11 ~~~~vvILAaG~GtRm~~~~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~----~~~ 83 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDT---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTL----GRT 83 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSS---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHH----TSC
T ss_pred CCceEEEECCcCcccCCCCC---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhc----CCc
Confidence 34789999999999999976 9999999999999999999999999999999999999999999752 23 467
Q ss_pred EEEEeCCCccCHHHHHHHHHhcccccC----CEEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCC
Q 007143 105 VKTIESHNIISAGDALRLIYEQNVIHG----DFVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPIT 178 (616)
Q Consensus 105 i~~i~~~~~~~~gdalr~~~~~~~i~~----dfLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~ 178 (616)
+.++.+++.+|||+|++. ++..+.+ ++|+++||. +....+..++++|+.. ++.+|+++.+..
T Consensus 84 i~~~~q~~~lGTa~Av~~--a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~-----~~~~ti~~~~~~----- 151 (501)
T 3st8_A 84 IDVALQDRPLGTGHAVLC--GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAV-----SAAVTVLTTTLD----- 151 (501)
T ss_dssp CEEEECSSCCCHHHHHHH--HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-----TCSEEEEEEECS-----
T ss_pred EEEEEcCCCCCcHHHHHH--HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhc-----cccceEeeeccC-----
Confidence 889999999999999996 4455643 489999997 4456899999999986 478888888765
Q ss_pred cccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhH-
Q 007143 179 HQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHL- 257 (616)
Q Consensus 179 ~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~l- 257 (616)
.+.+|| .+..| +.+++..+.|+|+.+. +-. ..+++++|+|++.+++|..+.+.......
T Consensus 152 dp~~yG----~i~~~-~~g~v~~ivEk~~~~~-------~~~--------~i~~in~Giy~f~~~~l~~~l~~l~~~n~~ 211 (501)
T 3st8_A 152 DPFGYG----RILRT-QDHEVMAIVEQTDATP-------SQR--------EIREVNAGVYAFDIAALRSALSRLSSNNAQ 211 (501)
T ss_dssp CCTTSC----EEEEC-TTCCEEEEECGGGCCH-------HHH--------HCCEEEEEEEEEEHHHHHHHHTTCCCCSTT
T ss_pred Cchhcc----ccccc-cceeEEeeccccCCCh-------hhc--------cceeeeceeeeecchhHHHhhhhhcccccc
Confidence 456888 77777 4889999999986331 111 24678899999999998755332111000
Q ss_pred HHHhhhhhhhcc-ccCceEEEEEccccchhh--ccChhhHHHHhhhh----hccc----cccccCCC-------cccCC-
Q 007143 258 RRHFVKGLLLDD-IMGYKIFTHEIHSSYAAR--IDNYRSYDIVSKDI----IQRW----TYPYVPDV-------KFCGN- 318 (616)
Q Consensus 258 r~dfv~~~l~~~-i~g~~I~~~~~~~~y~~~--V~s~~sY~~a~~di----l~r~----~~p~~p~~-------~~~~~- 318 (616)
...++..++... ..+..+..+... .+|.. +++...+..+.... ...| ..-..|.. .+..+
T Consensus 212 ~e~yltd~i~~~~~~g~~v~~~~~~-~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv 290 (501)
T 3st8_A 212 QELYLTDVIAILRSDGQTVHASHVD-DSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDT 290 (501)
T ss_dssp CSCCTTHHHHHHHHTTCCEEEEECS-SGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTC
T ss_pred cccchhhHHHHHHhcCceEEEEecc-chhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcc
Confidence 112233332221 256677777765 33333 33333332221111 1111 11011111 00000
Q ss_pred --Ccceeee---------------------------------cceEEcCCcEECCCCEECCCcEECCCCEECCCCEEece
Q 007143 319 --RATKLER---------------------------------RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDS 363 (616)
Q Consensus 319 --~~~~~~~---------------------------------~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s 363 (616)
....... ....++.++.+++.++|.+++.|++++.||.++.|.++
T Consensus 291 ~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s 370 (501)
T 3st8_A 291 VIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNS 370 (501)
T ss_dssp EECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESC
T ss_pred eecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEccc
Confidence 0000000 12234556666777777778888888888888888899
Q ss_pred EECCCCEECCCCEEeceEECCCCEECCCcEEec--------eEECCCcEECCCCEECCCCEECCCcEECCCCE----ECC
Q 007143 364 VIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRH--------VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFV----VPA 431 (616)
Q Consensus 364 ~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~--------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~----v~~ 431 (616)
+||++|.|++.+.|.+++|+.+|.||.+|.+-+ ++||++|+||.++.|.+++.||++|+||+|++ ||+
T Consensus 371 ~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~dvp~ 450 (501)
T 3st8_A 371 TIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPP 450 (501)
T ss_dssp EECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCT
T ss_pred eecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECcccCC
Confidence 999999999999999999999999999998843 78888888888888888888888888888877 456
Q ss_pred CCE-Ecccc
Q 007143 432 HSK-VSLLQ 439 (616)
Q Consensus 432 ~~~-v~~~~ 439 (616)
++. |++.+
T Consensus 451 ~~l~~~~~~ 459 (501)
T 3st8_A 451 GALAVSAGP 459 (501)
T ss_dssp TCEECCCCC
T ss_pred CCeEEeccC
Confidence 653 44444
No 5
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=4.2e-38 Score=345.12 Aligned_cols=322 Identities=15% Similarity=0.186 Sum_probs=216.7
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
++|.|||||+|.|+||+| .+||+|+|++|+|||+|+|+.|..+|+++|+|++++..+++++++.+ ..+.
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~--------~~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD--------PSLN 75 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------C
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc--------CCcE
Confidence 569999999999999997 78999999999999999999999999999999999888899988865 2355
Q ss_pred EEeCCCccCHHHHHHHHHhccccc--CCEEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 107 TIESHNIISAGDALRLIYEQNVIH--GDFVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~--~dfLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
++.++...|++++++.. ...+. +.||++.||+ +...+|..+++.|++ ..++++..+.. +..+
T Consensus 76 ~v~~~~~~g~~~~i~~~--~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~-------~~~~~~~~~~~-----~~~~ 141 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQA--APHFADDEDILMLYGDVPLISVDTLQRLLAAKPE-------GGIGLLTVKLD-----NPSG 141 (459)
T ss_dssp EEECSSCCCHHHHHHHH--GGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT-------TSEEEEEEECS-----CCTT
T ss_pred EEeCCCCCCcHHHHHHH--HHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh-------CCEEEEEEecC-----CCCc
Confidence 66667778999998864 34454 3499999999 778899999998764 22334444332 3446
Q ss_pred cCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHh-hhhcCCChhhHHHHh
Q 007143 183 LGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLS-LFTDNFDYQHLRRHF 261 (616)
Q Consensus 183 ~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~-lf~dnfd~q~lr~df 261 (616)
++ ++..| ++++..+.++|...... -...+.++|+|+++++++. ++..-.....-...+
T Consensus 142 ~g----~v~~~--~g~v~~~~ek~~~~~~~---------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 200 (459)
T 4fce_A 142 YG----RIVRE--NGDVVGIVEHKDASDAQ---------------REINEINTGILVANGRDLKRWLSLLDNNNAQGEFY 200 (459)
T ss_dssp SC----EEEEE--TTEEEEEECGGGCCTTG---------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCC
T ss_pred cc----EEEeC--CCcEEEEEECCCCChHH---------------hhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEE
Confidence 66 66666 68999999886522110 0135778999999999774 433211000001112
Q ss_pred hhhhhhcc-ccCceEEEEEccccch--hhccChhhHHHHhhhhhccccccccCCCcccCCCcceeeecceEEcCCcEECC
Q 007143 262 VKGLLLDD-IMGYKIFTHEIHSSYA--ARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRATKLERRGMYRALEIEQSR 338 (616)
Q Consensus 262 v~~~l~~~-i~g~~I~~~~~~~~y~--~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~~~~~~~i~~~~~v~i~~ 338 (616)
+.+++... ..|.+++++..+ +|| .+|+++++|..+...+..++...+.............+..+++.+++++.|++
T Consensus 201 ~~d~~~~~~~~g~~v~~~~~~-~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~ 279 (459)
T 4fce_A 201 ITDIIALAHADGKKIATVHPT-RLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDT 279 (459)
T ss_dssp TTHHHHHHHHTTCCEEEECCS-SGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECT
T ss_pred HHHHHHHHHHCCCeEEEEEcC-CHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECC
Confidence 33333332 246789999886 555 56999999999876555443221111110011112334455666777777777
Q ss_pred CCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEe
Q 007143 339 SAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELR 395 (616)
Q Consensus 339 ~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~ 395 (616)
+|.|++++.||++|.|+++++|.+++||++|.|+++|.|.+++|++++.||++|+|.
T Consensus 280 ~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~ 336 (459)
T 4fce_A 280 NVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLR 336 (459)
T ss_dssp TEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEEC
T ss_pred CeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEEC
Confidence 777777777777777777777777777777777777776666666666666555553
No 6
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=7.7e-38 Score=344.11 Aligned_cols=318 Identities=16% Similarity=0.202 Sum_probs=201.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
.-+|||||+|.|+||++ .+||+|+|++|+|||+|+|+.|..+|+++|+|++++..+++++++.+ .+.+
T Consensus 11 ~~~~vIlAaG~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~---------~i~~ 78 (468)
T 1hm9_A 11 SNFAIILAAGKGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG---------QTEF 78 (468)
T ss_dssp CEEEEEECCCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS---------SSEE
T ss_pred CCcEEEEcCCCCccCCC---CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC---------CcEE
Confidence 35899999999999986 78999999999999999999999999999999999888888877643 1345
Q ss_pred EeCCCccCHHHHHHHHHhccccc---CCEEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 108 IESHNIISAGDALRLIYEQNVIH---GDFVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~~~i~---~dfLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
+.++...|++++++... ..+. +.||+++||+ +...+|+.+++.|++. ++.+|+++.+.. ...+
T Consensus 79 v~~~~~~G~~~sl~~a~--~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~-----~~~~~i~~~~~~-----~~~~ 146 (468)
T 1hm9_A 79 VTQSEQLGTGHAVMMTE--PILEGLSGHTLVIAGDTPLITGESLKNLIDFHINH-----KNVATILTAETD-----NPFG 146 (468)
T ss_dssp EECSSCCCHHHHHHTTH--HHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-----TCSEEEEEEECS-----CCTT
T ss_pred EeCCccCChHHHHHHHH--HHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhc-----CCcEEEEEeccC-----CCCc
Confidence 55666789999988543 3343 3499999999 7788999999999875 356677766654 3345
Q ss_pred cCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcCCChhhHHHHh
Q 007143 183 LGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDNFDYQHLRRHF 261 (616)
Q Consensus 183 ~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dnfd~q~lr~df 261 (616)
++ ++.+|. ++++..|.++|..... . ....+.++|+|+++++.+ +++............+
T Consensus 147 ~g----~v~~d~-~g~v~~~~ek~~~~~~-------~--------~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~ 206 (468)
T 1hm9_A 147 YG----RIVRND-NAEVLRIVEQKDATDF-------E--------KQIKEINTGTYVFDNERLFEALKNINTNNAQGEYY 206 (468)
T ss_dssp SC----EEEECT-TCCEEEEECTTTCCTT-------G--------GGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCC
T ss_pred ee----EEEECC-CCCEEEEEECCCCChH-------H--------hcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEE
Confidence 66 677774 6899999998642110 0 024577899999999954 5554311100000112
Q ss_pred hhhhhhccc-cCceEEEEEccccchhh--ccChhhHHHHhhhhhcccccccc-CCCcccCCCcceeeecceEEcCCcEEC
Q 007143 262 VKGLLLDDI-MGYKIFTHEIHSSYAAR--IDNYRSYDIVSKDIIQRWTYPYV-PDVKFCGNRATKLERRGMYRALEIEQS 337 (616)
Q Consensus 262 v~~~l~~~i-~g~~I~~~~~~~~y~~~--V~s~~sY~~a~~dil~r~~~p~~-p~~~~~~~~~~~~~~~~i~~~~~v~i~ 337 (616)
+.++++..+ .|.+++++.++ +||.+ ++++++|..+...+..++..+.. +...+.. ....+..+.+.+++++.|+
T Consensus 207 ~~d~~~~l~~~g~~v~~~~~~-g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~i~~~~~i~ 284 (468)
T 1hm9_A 207 ITDVIGIFRETGEKVGAYTLK-DFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVN-PEATYIDIDVEIAPEVQIE 284 (468)
T ss_dssp TTHHHHHHHHHTCCEEEEECS-SGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESC-GGGCEECTTCEECTTCEEC
T ss_pred HHHHHHHHHHCCCEEEEEEcC-ChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEC-CCeeEECCCcEECCCCEEC
Confidence 233333222 46789999987 78987 55999999988776554422111 0000000 0111223344455555555
Q ss_pred CCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCc
Q 007143 338 RSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGC 392 (616)
Q Consensus 338 ~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~ 392 (616)
+++.|++++.||++|.|++++.|+++.||++|.|+ +|.|.+++|++++.|+.+|
T Consensus 285 ~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~ 338 (468)
T 1hm9_A 285 ANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYA 338 (468)
T ss_dssp SSCEEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSC
T ss_pred CCcEECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCce
Confidence 55555555555555555555555444444444444 4444333333333333333
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4.9e-36 Score=328.44 Aligned_cols=319 Identities=13% Similarity=0.173 Sum_probs=221.6
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
+.+.|||||+|.|+||++ ..||+|+|++|+|||+|+|+.|..+|+++|+|+++++.+++++++.+. .+.
T Consensus 4 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~--------~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE--------QVN 72 (456)
T ss_dssp CCEEEEEECCCCCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC--------CCE
T ss_pred CcceEEEECCCCCcccCC---CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC--------CcE
Confidence 458999999999999986 689999999999999999999999999999999998888888888652 244
Q ss_pred EEeCCCccCHHHHHHHHHhccccc--CCEEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 107 TIESHNIISAGDALRLIYEQNVIH--GDFVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~--~dfLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
++.++...|++++++.. ...+. +.||++.||+ +...+|..+++.|++ +.++++..+.. +..+
T Consensus 73 ~v~~~~~~g~~~~~~~~--~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~-------~~~~~~~~~~~-----~~~~ 138 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQA--APFFKDNENIVVLYGDAPLITKETLEKLIEAKPE-------NGIALLTVNLD-----NPTG 138 (456)
T ss_dssp EEECSCCCCHHHHHHHH--GGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT-------TSEEEEEEECS-----SCTT
T ss_pred EEeCCCCCCcHHHHHHH--HHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc-------CCEEEEEeecC-----CCCc
Confidence 56566678999998864 34453 3499999999 677899999988764 23455554433 2335
Q ss_pred cCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcCCChh----hH
Q 007143 183 LGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDNFDYQ----HL 257 (616)
Q Consensus 183 ~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dnfd~q----~l 257 (616)
++ .+..| ++++..+.++|... +... ...+.++|+|+++++.+ +.+....... .-
T Consensus 139 ~g----~v~~~--~g~v~~~~ek~~~~-------~~~~--------~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 197 (456)
T 2v0h_A 139 YG----RIIRE--NGNVVAIVEQKDAN-------AEQL--------NIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYY 197 (456)
T ss_dssp SC----EEEEE--TTEEEEEECTTTCC-------HHHH--------TCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCC
T ss_pred cc----eEEEc--CCcEEEEEECCCCC-------hhHh--------cCcEEEEEEEEEEHHHHHHHHHHhccccccccEE
Confidence 55 56666 68899998876411 1100 13567899999999855 4543211100 00
Q ss_pred HHHhhhhhhhccccCceEEEEEccc-cchhhccChhhHHHHhhhhhccccccc-cCCCcccCCCcceeeecceEEcCCcE
Q 007143 258 RRHFVKGLLLDDIMGYKIFTHEIHS-SYAARIDNYRSYDIVSKDIIQRWTYPY-VPDVKFCGNRATKLERRGMYRALEIE 335 (616)
Q Consensus 258 r~dfv~~~l~~~i~g~~I~~~~~~~-~y~~~V~s~~sY~~a~~dil~r~~~p~-~p~~~~~~~~~~~~~~~~i~~~~~v~ 335 (616)
..|+++.++. .+.+++++..++ ..|.+|+++++|..+.+.+..+....+ .+...+. ........+++.+++++.
T Consensus 198 ~~d~~~~~~~---~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~ig~~~~ 273 (456)
T 2v0h_A 198 LTDLIALANQ---DNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIY-DPARFDLRGTLEHGKDVE 273 (456)
T ss_dssp GGGHHHHHHH---TTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEES-CGGGEEEEEEEEECSSCE
T ss_pred HHHHHHHHHH---cCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE-CCCccEEcCceEECCCCE
Confidence 1233333322 467899998862 245689999999998876554322111 0111000 111334556777888888
Q ss_pred ECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEe
Q 007143 336 QSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELR 395 (616)
Q Consensus 336 i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~ 395 (616)
|++++.|++++.||++|.|++++.|.+++||++|.|+++|.|.+++|++++.|+++|.|.
T Consensus 274 I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~ 333 (456)
T 2v0h_A 274 IDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLR 333 (456)
T ss_dssp ECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEEC
T ss_pred EcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEEC
Confidence 888888888888888888888888888888888888888887777777776666666654
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.96 E-value=1.1e-28 Score=253.30 Aligned_cols=237 Identities=16% Similarity=0.229 Sum_probs=184.1
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCC-------
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQ------- 100 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~------- 100 (616)
.|+|||||+|.|+||+|+|..+||+|+||+|+|||+|+|+.|..+|+++|+|++++..++|++|+.+..+...
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~ 81 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNK 81 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CCH
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcccc
Confidence 5899999999999999999999999999999999999999999999999999999999999999976422110
Q ss_pred -----------CCcEEEEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCceecchh-----HHHHHHHHHHhhccCCCc
Q 007143 101 -----------PNFTVKTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTVSNML-----LTQALQEHKERKKKDNNA 163 (616)
Q Consensus 101 -----------~~~~i~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i~~~~-----l~~~l~~h~~~~~~d~~a 163 (616)
.+..+.++.+....|++++++.. ...+. ++|||++||++++.+ |..+++.|++.. +
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a--~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~-----~ 154 (281)
T 3juk_A 82 ENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTG--EALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQ-----C 154 (281)
T ss_dssp HHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHT--HHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHC-----S
T ss_pred hhhhhhhhccccCccEEEEecCCCCCcHHHHHHH--HHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcC-----C
Confidence 13577788877889999999854 44454 459999999999888 999999998753 3
Q ss_pred eEEEEEecCCCCCCCcccccCCCceEEEEeC-CCC--eEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEee
Q 007143 164 VMTMIIKKSKPSPITHQSRLGTDELFMAIDP-NTK--QLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDIC 240 (616)
Q Consensus 164 ~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~-~~~--rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIc 240 (616)
.|+++...... ...+|| ++.+|. .++ +|..+.|||..... .+.+.++|||++
T Consensus 155 -~~v~~~~~~~~---~~~~~g----~v~~~~~~~g~~~v~~~~Ekp~~~~~-----------------~~~~~~~GiYi~ 209 (281)
T 3juk_A 155 -SIVAIEEVALE---EVSKYG----VIRGEWLEEGVYEIKDMVEKPNQEDA-----------------PSNLAVIGRYIL 209 (281)
T ss_dssp -CEEEEEECCTT---TGGGSE----EEEEEEEETTEEEEEEEEESCCTTTC-----------------SCSEEEEEEEEE
T ss_pred -CEEEEEEechh---hcccCC----EEEeccCCCCceEEeEEEECcCCCCC-----------------CcceeEEEEEEE
Confidence 45566554332 456777 777763 135 99999999863211 145678999999
Q ss_pred CHhHHhhhhcCC-----ChhhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 241 SPEVLSLFTDNF-----DYQHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 241 sp~vl~lf~dnf-----d~q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
++++|..+.... .|+ + .|+++.++ ...+++++.++ +||.+|+++++|..+++.++.
T Consensus 210 ~~~~l~~l~~~~~~~~~e~~-l-~d~i~~l~----~~~~v~~~~~~-g~~~dIgt~~d~~~a~~~l~~ 270 (281)
T 3juk_A 210 TPDIFEILSETKPGKNNEIQ-I-TDALRTQA----KRKRIIAYQFK-GKRYDCGSVEGYIEASNAYYK 270 (281)
T ss_dssp CTTHHHHHHTCCCCGGGSCC-H-HHHHHHHH----HHSCCEEEECC-SEEEETTSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCCcee-H-HHHHHHHH----hcCCEEEEEeC-CeEEcCCCHHHHHHHHHHHHh
Confidence 999999887531 111 1 34444443 33489999997 899999999999999998875
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.95 E-value=1.4e-26 Score=236.16 Aligned_cols=235 Identities=15% Similarity=0.207 Sum_probs=180.3
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCc-HHHHHHHHHhc-CCCCCCCc
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAH-SKQVIDYLENS-EWFSQPNF 103 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~-~~~i~~~l~~~-~~~~~~~~ 103 (616)
++.|+|||||+|.|+||+|+|..+||+|+||+|+|||+|+|+.|..+|+++|+|++++. .+.+.+++... .| ++
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~~~~----~~ 97 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQEF----GV 97 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGG----TC
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhcccc----Cc
Confidence 45689999999999999999999999999999999999999999999999999999864 57888888753 23 46
Q ss_pred EEEEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCceecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 104 TVKTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTVSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 104 ~i~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
++.++.+....|++++++.. ...+. ++||+++||++++.+|.++++.|+++ ++.+|+++.+.. +..+
T Consensus 98 ~i~~~~~~~~~G~~~al~~a--~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~-----~~~~ 165 (269)
T 4ecm_A 98 SFTYRVQDKAGGIAQALGLC--EDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQ-----KEGAKVLLQSVD-----DPER 165 (269)
T ss_dssp EEEEEECSSCCCHHHHHHTT--HHHHTTSEEEEEETTEEESSCSHHHHHHHHTS-----SSSEEEEEEECS-----CGGG
T ss_pred eEEEeeCCccCcHHHHHHHH--HHhcCCCcEEEEeCCccCccCHHHHHHHHHhc-----CCCeEEEEEECC-----CCCC
Confidence 78777777788999999854 33444 45999999999899999999999864 356777777654 3456
Q ss_pred cCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHHHHhh
Q 007143 183 LGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFV 262 (616)
Q Consensus 183 ~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr~dfv 262 (616)
++ ++.+| .++|+.+.++|..+ .+.++++|||+++++++..+........ ..-.+
T Consensus 166 ~g----~v~~d--~g~v~~~~ekp~~~-------------------~~~~~~~Giy~~~~~~l~~l~~~~~~~~-ge~~l 219 (269)
T 4ecm_A 166 FG----VANIQ--NRKIIEIEEKPKEP-------------------KSSYAVTGIYLYDSKVFSYIKELKPSAR-GELEI 219 (269)
T ss_dssp SE----EEEEE--TTEEEEEEESCSSC-------------------SCSEEEEEEEEECTTHHHHHTSCCBCTT-SCBCH
T ss_pred ce----EEEEc--CCEEEEEEECCCCC-------------------CCcEEEEEEEEECHHHHHhhhhcCCCCC-CeeeH
Confidence 66 77777 48999999987422 1356789999999999987764211000 00112
Q ss_pred hhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 263 KGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 263 ~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
..+++..+...+++++..+ ++|.+|+++++|..+++.+.+
T Consensus 220 ~d~l~~l~~~g~v~~~~~~-~~~~dIgt~~dl~~a~~~l~~ 259 (269)
T 4ecm_A 220 TDINNWYLKRGVLTYNEMS-GWWTDAGTHVSLQRANALARD 259 (269)
T ss_dssp HHHHHHHHHTTCEEEEECC-SCEEECSSHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCEEEEEeC-CEEEeCCCHHHHHHHHHHHHh
Confidence 3333333333478888876 799999999999999988764
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.94 E-value=4.3e-26 Score=230.67 Aligned_cols=228 Identities=15% Similarity=0.262 Sum_probs=167.7
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhc-----CCCC---
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENS-----EWFS--- 99 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~-----~~~~--- 99 (616)
.|+|||||+|.|+||+|+|..+||+|+||+|+|||+|+|+.|.++|+++|+|++++..+++++|+.+. .+..
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMA 81 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEGG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhccccccccccccc
Confidence 48999999999999999999999999999999999999999999999999999998889999998753 1110
Q ss_pred ----------CCCcEEEEEeCCCccCHHHHHHHHHhcccc--cCCEEEEeCceecchhHHHHHHHHHHhhccCCCceEEE
Q 007143 100 ----------QPNFTVKTIESHNIISAGDALRLIYEQNVI--HGDFVLISGDTVSNMLLTQALQEHKERKKKDNNAVMTM 167 (616)
Q Consensus 100 ----------~~~~~i~~i~~~~~~~~gdalr~~~~~~~i--~~dfLlv~gD~i~~~~l~~~l~~h~~~~~~d~~a~mT~ 167 (616)
..+..+.+..+....|++++++. ++..+ .++|++++||++++.++.++++.|++. ++.+|+
T Consensus 82 ~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~--a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~-----~~~~t~ 154 (259)
T 1tzf_A 82 ENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKR--VAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAH-----GKKATL 154 (259)
T ss_dssp GTEEEETTCCCCCCEEEEEECCSSCCHHHHHHH--TGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHH-----CCSEEE
T ss_pred ccceeeeeccccccceeeeecccccCcHHHHHH--HHHhcCCCCcEEEEECCEecccCHHHHHHHHHHh-----CCeEEE
Confidence 00112333444557899999985 44555 345999999999999999999999865 355676
Q ss_pred EEecCCCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhh
Q 007143 168 IIKKSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSL 247 (616)
Q Consensus 168 v~~~~~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~l 247 (616)
...+. ..+++ ++.+| +++|..|.+||... ..+.++|||+++++++..
T Consensus 155 ~~~~~-------~~~~g----~v~~~--~g~v~~~~ekp~~~--------------------~~~~~~Giy~~~~~~l~~ 201 (259)
T 1tzf_A 155 TATFP-------PGRFG----ALDIQ--AGQVRSFQEKPKGD--------------------GAMINGGFFVLNPSVIDL 201 (259)
T ss_dssp EEECC-------CCCSE----EEEEE--TTEEEEEEESCSCC--------------------SCCEECCCEEECGGGGGG
T ss_pred EEecC-------CCCcc----EEEEc--CCEEEEEEecCCCC--------------------CceEEEEEEEeCHHHHHh
Confidence 54431 23565 67777 68999999987521 357789999999999987
Q ss_pred hhc-CCChhhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 248 FTD-NFDYQHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 248 f~d-nfd~q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
+.. ++++. .+++..++. ..+++++.++ ++|.+|+++++|..+++.+..
T Consensus 202 l~~~~~~~~---~~~i~~~~~----~~~v~~~~~~-~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 202 IDNDATTWE---QEPLMTLAQ----QGELMAFEHP-GFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp CCSTTCCTT---THHHHHHHH----TTCEEEEEEC-SCEEECCSHHHHHHHHHHHHT
T ss_pred hcccccccH---HHHHHHHHH----cCCEEEEEeC-cEEEeCCCHHHHHHHHHHHhc
Confidence 754 23332 345555432 3479999987 799999999999999988765
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.94 E-value=9.1e-26 Score=233.52 Aligned_cols=243 Identities=12% Similarity=0.146 Sum_probs=165.1
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCC-------
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWF------- 98 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~------- 98 (616)
...|+|||||+|.|+||+|+|...||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++++|+... |.
T Consensus 12 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~-~~l~~~l~~ 90 (297)
T 2ux8_A 12 KPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIA-YELEATMAA 90 (297)
T ss_dssp CCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCC-HHHHHHHHT
T ss_pred cCccEEEEECCCCccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhh-hhhhhhhhh
Confidence 3458999999999999999999999999999999999999999999999999999998889999998642 20
Q ss_pred -----------CCCCcEEEEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCceecc---hhHHHHHHHHHHhhccCCCc
Q 007143 99 -----------SQPNFTVKTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTVSN---MLLTQALQEHKERKKKDNNA 163 (616)
Q Consensus 99 -----------~~~~~~i~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i~~---~~l~~~l~~h~~~~~~d~~a 163 (616)
...++++.++.++...|++++++.. ...+. ++|+|++||++++ .+|..+++.|++.. +
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a--~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~-----~ 163 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCA--RDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVG-----G 163 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTT--HHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHC-----S
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHH--HHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcC-----C
Confidence 0013567777777788999999853 34454 4599999999877 68999999998752 3
Q ss_pred eEEEEEecCCCCCCCcccccCCCceEEEEeC-CCC--eEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEee
Q 007143 164 VMTMIIKKSKPSPITHQSRLGTDELFMAIDP-NTK--QLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDIC 240 (616)
Q Consensus 164 ~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~-~~~--rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIc 240 (616)
.|+.+.+.... ...++| ++.++. +.+ +|..|.++|.+.. ..+.+.++|+|++
T Consensus 164 -~~i~~~~~~~~---~~~~yg----~v~~~~~~~~~~~v~~~~ekp~~~~-----------------~~~~~~~~Giyi~ 218 (297)
T 2ux8_A 164 -NLICAEEVPDD---QTHRYG----IITPGTQDGVLTEVKGLVEKPAPGT-----------------APSNLSVIGRYIL 218 (297)
T ss_dssp -EEEEEC------------------CCCCCCBCSSEEEC-------------------------------CCCEEEEEEE
T ss_pred -CEEEEEecCcc---cCCCCC----eEEecccCCCceeEEEEEECCCCCC-----------------CCccEEEEEEEEE
Confidence 45655554221 234565 443332 234 8888988874210 1246788999999
Q ss_pred CHhHHhhhhcCCChhhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 241 SPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 241 sp~vl~lf~dnfd~q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
+++++..+.....-.. ..-.+..++...+...+++++.++ ++|.+|++|++|..++++++.
T Consensus 219 ~~~~l~~l~~~~~~~~-~~~~l~d~i~~l~~~~~v~~~~~~-~~w~dIgt~~dl~~a~~~~~~ 279 (297)
T 2ux8_A 219 QPEVMRILENQGKGAG-GEIQLTDAMQRMIGDQPFHGVTFQ-GTRYDCGDKAGFIQANLAVAL 279 (297)
T ss_dssp CTHHHHHHHHTC---------CCTTGGGGTTTSCEEEEECS-SEEEETTSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCCC-CeeEHHHHHHHHHhcCCEEEEEec-ceEEeCCCHHHHHHHHHHHHh
Confidence 9999988764321000 011123444444444589999997 799999999999999987764
No 12
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.93 E-value=2.2e-25 Score=231.13 Aligned_cols=234 Identities=15% Similarity=0.195 Sum_probs=177.4
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCC--------
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFS-------- 99 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~-------- 99 (616)
.|+|||||+|.|+||+|+|..+||+|+||+|+|||+|+|+.|..+|+++|+|+++++.++|++|+.. .|..
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~-~~~l~~~l~~~~ 86 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDT-SFELEAMLEKRV 86 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSC-CHHHHHHHC---
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhc-chhhhhhhhhcc
Confidence 5899999999999999999999999999999999999999999999999999999888999999864 2200
Q ss_pred ------------CCCcEEEEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCceecch--------hHHHHHHHHHHhhc
Q 007143 100 ------------QPNFTVKTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTVSNM--------LLTQALQEHKERKK 158 (616)
Q Consensus 100 ------------~~~~~i~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i~~~--------~l~~~l~~h~~~~~ 158 (616)
..++++.++.+....|++++++.. ...+. ++|+|++||++++. +|..+++.|++..
T Consensus 87 ~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a--~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~- 163 (302)
T 2e3d_A 87 KRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCA--HPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETG- 163 (302)
T ss_dssp -CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHT--HHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHC-
T ss_pred chhhhhhhhhccccCcceEEeeCCccCCHHHHHHHH--HHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcC-
Confidence 014577777777789999999864 34454 45999999998763 7999999997652
Q ss_pred cCCCceEEEEEecCCCCCCCcccccCCCceEEEEeC---CCC---eEEEeeecCCCCCcceEeehHhhhcCCceEEEecc
Q 007143 159 KDNNAVMTMIIKKSKPSPITHQSRLGTDELFMAIDP---NTK---QLLYYEDKADHSKGTICLDKMLLAENPSISLHNDK 232 (616)
Q Consensus 159 ~d~~a~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~---~~~---rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl 232 (616)
+ +|+++.+.. ...++| ++.++. ..+ +|..+.++|.+... .+.+
T Consensus 164 ----~-~~i~~~~~~-----~~~~yg----~v~~~~~~~~~g~~~~v~~~~ekp~~~~~-----------------~~~~ 212 (302)
T 2e3d_A 164 ----H-SQIMVEPVA-----DVTAYG----VVDCKGVELAPGESVPMVGVVEKPKADVA-----------------PSNL 212 (302)
T ss_dssp ----C-EEEEEEECS-----CGGGSE----EEECTTCCCCTTCEEEECEEEESCCTTTC-----------------SCSE
T ss_pred ----C-cEEEEEEcc-----CCCCcc----EEEecccccCCCCceeEEEEEECCCCCcc-----------------ccce
Confidence 4 567666643 345666 565421 245 89999998753110 1346
Q ss_pred ccceeEeeCHhHHhhhhcCCC-----hhhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 233 QDCYIDICSPEVLSLFTDNFD-----YQHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 233 ~d~gIyIcsp~vl~lf~dnfd-----~q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
..+|+|+++++++..+..... |. + .+.+..++. .+ +++++.++ ++|.+|++|++|..++++++.
T Consensus 213 ~~~Giyi~~~~~l~~l~~~~~~~~~~~~-l-~d~i~~l~~---~~-~v~~~~~~-~~~~DIgt~~d~~~a~~~~~~ 281 (302)
T 2e3d_A 213 AIVGRYVLSADIWPLLAKTPPGAGDEIQ-L-TDAIDMLIE---KE-TVEAYHMK-GKSHDCGNKLGYMQAFVEYGI 281 (302)
T ss_dssp EEEEEEEECTTHHHHHTCCCC----CCC-H-HHHHHHHHH---HS-CEEEEECC-SCEEECSSHHHHHHHHHHHHH
T ss_pred EEEEEEEECHHHHHHHHhhCCCCCCcee-h-HHHHHHHHH---hC-CEEEEEeC-CeEEcCCCHHHHHHHHHHHHh
Confidence 779999999999988765221 11 1 234443332 24 89999997 799999999999999976653
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.93 E-value=5.9e-25 Score=230.25 Aligned_cols=240 Identities=15% Similarity=0.172 Sum_probs=178.1
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcC-CCC-----
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSE-WFS----- 99 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~-~~~----- 99 (616)
++.|+|||||+|.|+||+|+|...||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++.+|+.... |..
T Consensus 10 ~~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 10 NAVKTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp --CCEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred hcceEEEEECCCCccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 34589999999999999999999999999999999999999999999999999999988889998875421 100
Q ss_pred ------------CCCcEEEEEeCCCccCHHHHHHHHHhccccc-CC--EEEEeCceecc--hhHHHHHHHHHHhhccCCC
Q 007143 100 ------------QPNFTVKTIESHNIISAGDALRLIYEQNVIH-GD--FVLISGDTVSN--MLLTQALQEHKERKKKDNN 162 (616)
Q Consensus 100 ------------~~~~~i~~i~~~~~~~~gdalr~~~~~~~i~-~d--fLlv~gD~i~~--~~l~~~l~~h~~~~~~d~~ 162 (616)
..++++.++.++...|++++++. +...+. ++ |||++||++++ .+|..+++.|++. +
T Consensus 90 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~--a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~-----~ 162 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGL--AESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF-----G 162 (323)
T ss_dssp TCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHT--TGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTT-----C
T ss_pred chhhhhhhhhccccCcceEEEeCCccCCcHHHHHH--HHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhc-----C
Confidence 01356777777777899999985 344453 45 99999999777 6899999999764 2
Q ss_pred ceEEEEEecCCCCCCCcccccCCCceEEEEeC---CC--CeEEEeeecCCCCCcceEeehHhhhcCCceEEEecccccee
Q 007143 163 AVMTMIIKKSKPSPITHQSRLGTDELFMAIDP---NT--KQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYI 237 (616)
Q Consensus 163 a~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~---~~--~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gI 237 (616)
+ .|+++.+..+. ...+|| ++.++. .. ++|..|.++|.+... .+.+..+|+
T Consensus 163 ~-~~i~~~~~~~~---~~~~yg----~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-----------------~~~~~~~Gi 217 (323)
T 2pa4_A 163 G-SVLCAVEVSEA---DVSKYG----IFEIEADTKDSDVKKVKGMVEKPAIEDA-----------------PSRLAATGR 217 (323)
T ss_dssp S-EEEEEEECCGG---GGGGSE----EEEEEECCSSTTEEEEEEEEESCCTTTC-----------------SCSEEEEEE
T ss_pred C-cEEEEEEeccc---ccCCcc----EEEeCCcccCCCceeEEEEEECCCCccc-----------------cccEEEEEE
Confidence 3 46666554322 344666 666661 23 499999998852110 134677999
Q ss_pred EeeCHhHHhhhhcCCC-----hhhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 238 DICSPEVLSLFTDNFD-----YQHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 238 yIcsp~vl~lf~dnfd-----~q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
|+++++++..+..... |+ + .+.+..++. .|.+++++.++ ++|.+|+++++|..++++++.
T Consensus 218 Y~~~~~~~~~l~~~~~~~~ge~~-l-~d~i~~l~~---~g~~v~~~~~~-g~w~DIgt~~dl~~a~~~~~~ 282 (323)
T 2pa4_A 218 YLLDRKIFDALRRITPGAGGELQ-L-TDAIDLLID---EGHPVHIVIHQ-GKRHDLGNPGGYIPACVDFGL 282 (323)
T ss_dssp EEEETHHHHHHHHCCCCGGGCCC-H-HHHHHHHHH---TTCCEEEEECC-SEEEECSSHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHhhCCCCCCeEe-H-HHHHHHHHH---cCCCEEEEEeC-CeEEeCCCHHHHHHHHHHHhh
Confidence 9999999988764221 11 1 244444332 35789999997 799999999999999987664
No 14
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.92 E-value=4.4e-24 Score=221.62 Aligned_cols=256 Identities=12% Similarity=0.087 Sum_probs=180.8
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCccccee--CCeehHHHHHHHHHHCCCcEEEEEcCCc-HHHHHHHHHhc-CCCCCCC
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPL--VNVPMINYTLAWLEAAGVAEVFVFCCAH-SKQVIDYLENS-EWFSQPN 102 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi--~g~PlI~y~Le~L~~~Gv~eI~vv~~~~-~~~i~~~l~~~-~~~~~~~ 102 (616)
+.++|||||+|.|+||+| ||+|+|| +|+|||+|+|+.+..+|+++|+|++++. .+++++|+.+. .| +
T Consensus 4 m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~----~ 74 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEG----R 74 (303)
T ss_dssp CCCEEEEECTTCBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTT----T
T ss_pred CceEEEEECCCCcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhcc----C
Confidence 358999999999999999 8999999 5999999999999999999999999988 58999999763 23 3
Q ss_pred cEEEEEeCC---------------CccCHHHHHHHHHhcccccCCEEEEeCceecchh-HHHHHHHHHHhhccCCCceEE
Q 007143 103 FTVKTIESH---------------NIISAGDALRLIYEQNVIHGDFVLISGDTVSNML-LTQALQEHKERKKKDNNAVMT 166 (616)
Q Consensus 103 ~~i~~i~~~---------------~~~~~gdalr~~~~~~~i~~dfLlv~gD~i~~~~-l~~~l~~h~~~~~~d~~a~mT 166 (616)
.++.++.++ ..+|+|+|++. ++..+.++|||++||++++.+ |+.++++|++.. .+++.+|
T Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~--a~~~i~~~~lV~~gD~l~~~~~~~~l~~~~~~~~--~~~~~~~ 150 (303)
T 3pnn_A 75 IPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLM--GRDAIREPFAVINADDFYGRNGFEVLARKLMTLE--GKQGEYC 150 (303)
T ss_dssp SCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHT--TTTTCCSCEEEEESSCBCCHHHHHHHHHHHHTTT--TCSSEEE
T ss_pred CcEEEEecccccccccccccccccccCCcHHHHHH--HHHhcCCCEEEEECCeecCHHHHHHHHHHHHHhc--cccCceE
Confidence 567777665 57899999994 566777779999999999886 999999998631 1346778
Q ss_pred EEEecCCCCCCCcc-cccCCCc-eEEEEeCCCCeEEEeeecCCCCC--cceEeehHhhhcCCceE-EEeccccceeEeeC
Q 007143 167 MIIKKSKPSPITHQ-SRLGTDE-LFMAIDPNTKQLLYYEDKADHSK--GTICLDKMLLAENPSIS-LHNDKQDCYIDICS 241 (616)
Q Consensus 167 ~v~~~~~~~~~~~~-~r~~~~~-~vv~id~~~~rvl~~~e~p~~~~--~~~~l~~~l~~~~~~~~-ir~dl~d~gIyIcs 241 (616)
+++.+.. ++ .+++... .++.+|. +++|..+.|||.... ....+... .-.... -.+.++.+|+|+++
T Consensus 151 v~~~~~~-----~~~~~~g~~~~G~v~~d~-~g~v~~i~Ekp~~~~~~~~~~~~~~---~g~~~~~~~~~~i~~GiY~f~ 221 (303)
T 3pnn_A 151 MVGYRVG-----NTLSESGGVSRGVCQVDE-KHLLTGVVERTGIERTDGTISFRDE---TGKICTLAEDAPVSMNMWGFT 221 (303)
T ss_dssp EEEEEGG-----GSCBTTBCEEEEEEEECT-TSBEEEEEEEEEEEEETTEEEEECT---TSCEEEECTTCEEEEEEEEEC
T ss_pred EEEEECC-----CccCccCceeeeeEeeCC-CCcEEEEEECCCCcccccccccccc---ccccccCCCCCEEEEEEEEEC
Confidence 7776653 22 3442111 2667774 689999999985210 00000000 000000 02568899999999
Q ss_pred HhHHhhhhcCCC-------hhhHHHHhhhhhhhccc-cCc-eEEEEEccccchhhccChhhHHHHhhhhhccc
Q 007143 242 PEVLSLFTDNFD-------YQHLRRHFVKGLLLDDI-MGY-KIFTHEIHSSYAARIDNYRSYDIVSKDIIQRW 305 (616)
Q Consensus 242 p~vl~lf~dnfd-------~q~lr~dfv~~~l~~~i-~g~-~I~~~~~~~~y~~~V~s~~sY~~a~~dil~r~ 305 (616)
|+++..+...|. ...-...++.++++..+ .|. +++++..+ ++|.+|+++++|..+.+.+-..|
T Consensus 222 ~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~-g~w~dIgt~~dl~~a~~~l~~~~ 293 (303)
T 3pnn_A 222 PDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTT-ARWFGVTYSDDRPGVVAKLRELT 293 (303)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECS-CCCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeC-CceECCCCHHHHHHHHHHHHHHH
Confidence 999998754110 00000112333443333 354 89999997 89999999999999988776655
No 15
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.92 E-value=4e-24 Score=221.00 Aligned_cols=228 Identities=17% Similarity=0.194 Sum_probs=171.6
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcC-CcHHHHHHHHHhc-CCCCCCCcEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCC-AHSKQVIDYLENS-EWFSQPNFTV 105 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~-~~~~~i~~~l~~~-~~~~~~~~~i 105 (616)
.|+|||||+|.|+||+|+|...||+|+||+|+|||+|+|+.|..+|+++|+|+++ ++.+++++++.+. .| ++++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g~~~----g~~i 78 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQF----GVRF 78 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGG----TSEE
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhcccc----CceE
Confidence 3899999999999999999999999999999999999999999999999999886 6688899999763 24 4677
Q ss_pred EEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCcee-cchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccccc
Q 007143 106 KTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTV-SNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRL 183 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i-~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~ 183 (616)
.++.++...|++++++.. ...+. ++|+++.||.+ .+.+|..+++.|.++. ..+|++..+.. ++.++
T Consensus 79 ~~~~~~~~~G~~~al~~a--~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~-----~~~~v~~~~v~-----dp~~~ 146 (295)
T 1lvw_A 79 SYRVQEEPRGIADAFIVG--KDFIGDSKVALVLGDNVFYGHRFSEILRRAASLE-----DGAVIFGYYVR-----DPRPF 146 (295)
T ss_dssp EEEECSSCCCGGGHHHHT--HHHHTTSCEEEEETTCCEECTTHHHHHHHHHTCC-----SSEEEEEEECS-----CCTTS
T ss_pred EEeeCCCCCChHHHHHHH--HHHhCCCcEEEEECCccccCcCHHHHHHHHHHcC-----CCcEEEEEECC-----CcccC
Confidence 777777788999998853 34454 45888889984 4679999999997642 23444444443 33466
Q ss_pred CCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCC-----ChhhHH
Q 007143 184 GTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNF-----DYQHLR 258 (616)
Q Consensus 184 ~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnf-----d~q~lr 258 (616)
+ ++.+|. +++++.+.+||..+ ++++..+|+|+++++++..+..-. .+. +
T Consensus 147 g----~v~~d~-~g~v~~~~ekp~~~-------------------~s~~~~~Giy~f~~~~l~~~~~~~~~~~ge~~-~- 200 (295)
T 1lvw_A 147 G----VVEFDS-EGRVISIEEKPSRP-------------------KSNYVVPGLYFYDNQVVEIARRIEPSDRGELE-I- 200 (295)
T ss_dssp E----EEEECT-TSBEEEEEESCSSC-------------------SCSEECCSEEEECTTHHHHHHHCCCCTTSCCC-H-
T ss_pred C----EEEECC-CCcEEEEEECCCCC-------------------CCCEEEEEeEEEcHHHHHHHHhcCCcccCcee-H-
Confidence 6 777774 78999999987522 134677999999999988774311 110 1
Q ss_pred HHhhhhhhhccccCceEEEEEccccc-hhhccChhhHHHHhhhh
Q 007143 259 RHFVKGLLLDDIMGYKIFTHEIHSSY-AARIDNYRSYDIVSKDI 301 (616)
Q Consensus 259 ~dfv~~~l~~~i~g~~I~~~~~~~~y-~~~V~s~~sY~~a~~di 301 (616)
.|.++.++ ...++.++.+..+| |.+|+++++|..++..+
T Consensus 201 td~~~~~l----~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~ 240 (295)
T 1lvw_A 201 TSVNEEYL----RMGKLRVELMGRGMAWLDTGTHDGLLEASSFI 240 (295)
T ss_dssp HHHHHHHH----HTTCEEEEEECTTCEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHH----HcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHH
Confidence 23333332 33467777776575 99999999999987754
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.92 E-value=3.6e-24 Score=221.14 Aligned_cols=229 Identities=17% Similarity=0.233 Sum_probs=171.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcC-CcHHHHHHHHHhcC-CCCCCCcEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCC-AHSKQVIDYLENSE-WFSQPNFTV 105 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~-~~~~~i~~~l~~~~-~~~~~~~~i 105 (616)
.|+|||||+|.|+||+|+|...||+|+||+|+|||+|+|+.|..+|+++|+|++. ++.+++++++.+.. | ++++
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~----g~~i 77 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNW----GLDL 77 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGG----TCEE
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhccccc----CceE
Confidence 4899999999999999999999999999999999999999999999999998884 56788999997632 4 4677
Q ss_pred EEEeCCCccCHHHHHHHHHhccccc-CCEEEEeCcee-cchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccccc
Q 007143 106 KTIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTV-SNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRL 183 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i-~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~ 183 (616)
.++.++...|++++++.. ...+. ++|+++.||.+ .+.+|..+++.|.++. ..+|++..+.. ++.++
T Consensus 78 ~~~~~~~~~G~~~al~~a--~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~-----~~~~v~~~~v~-----dp~~~ 145 (293)
T 1fxo_A 78 QYAVQPSPDGLAQAFLIG--ESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQ-----TGASVFAYHVL-----DPERY 145 (293)
T ss_dssp EEEECSSCCCGGGHHHHT--HHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCC-----SSEEEEEEECS-----CGGGS
T ss_pred EEeeCCCCCCHHHHHHHH--HHHhCCCCEEEEECChhccCccHHHHHHHHHhcC-----CCcEEEEEECC-----CcccC
Confidence 777777788999998853 34454 45999999984 4679999999997542 23444444433 34467
Q ss_pred CCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCC-----ChhhHH
Q 007143 184 GTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNF-----DYQHLR 258 (616)
Q Consensus 184 ~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnf-----d~q~lr 258 (616)
| ++.+|. +++++.+.++|..+ ++.+..+|+|+++++++..+..-. .+. +
T Consensus 146 g----~v~~d~-~g~v~~~~ekp~~~-------------------~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~-~- 199 (293)
T 1fxo_A 146 G----VVEFDQ-GGKAISLEEKPLEP-------------------KSNYAVTGLYFYDQQVVDIARDLKPSPRGELE-I- 199 (293)
T ss_dssp E----EEEECT-TSCEEEEEESCSSC-------------------SSSEEEEEEEEECTTHHHHHHHCCCCTTSSCC-H-
T ss_pred c----EEEECC-CCcEEEEEECCCCC-------------------CCCeEEEEEEEEcHHHHHHHHhcCcccCCcee-H-
Confidence 7 777874 78999999987422 134677899999999998774311 111 1
Q ss_pred HHhhhhhhhccccCceEEEEEccccc-hhhccChhhHHHHhhhhh
Q 007143 259 RHFVKGLLLDDIMGYKIFTHEIHSSY-AARIDNYRSYDIVSKDII 302 (616)
Q Consensus 259 ~dfv~~~l~~~i~g~~I~~~~~~~~y-~~~V~s~~sY~~a~~dil 302 (616)
.|.++.++ ..+++.++.+..+| |.+|+++++|..++..+-
T Consensus 200 td~~~~~l----~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 200 TDVNRAYL----ERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp HHHHHHHH----HTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHH----hcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 23333333 33467777776575 999999999999876553
No 17
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.91 E-value=2.8e-24 Score=222.21 Aligned_cols=228 Identities=17% Similarity=0.217 Sum_probs=171.5
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcC-CcHHHHHHHHHhc-CCCCCCCcEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCC-AHSKQVIDYLENS-EWFSQPNFTVK 106 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~-~~~~~i~~~l~~~-~~~~~~~~~i~ 106 (616)
|+|||||+|.|+||+|+|...||+|+||+|+|||+|+|+.|..+|+++|+|+++ ++.+++++++.+. .| ++++.
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~----g~~i~ 79 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEF----GIQLE 79 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGG----TCEEE
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhccccc----CceEE
Confidence 799999999999999999999999999999999999999999999999999886 6688999999763 24 46777
Q ss_pred EEeCCCccCHHHHHHHHHhccccc-CCEEEEeCcee-cchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccC
Q 007143 107 TIESHNIISAGDALRLIYEQNVIH-GDFVLISGDTV-SNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLG 184 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~-~dfLlv~gD~i-~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~ 184 (616)
++.++...|++++++.. ...+. ++|+++.||++ .+.+|..+++.|.++. ..+|++..+.. ++.++|
T Consensus 80 ~~~~~~~~G~~~al~~a--~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~-----~~~~v~~~~v~-----dp~~yg 147 (296)
T 1mc3_A 80 YAEQPSPDGLAQAFIIG--ETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAART-----EGATVFGYQVM-----DPERFG 147 (296)
T ss_dssp EEECSSCCCSTHHHHHT--HHHHTTSCEEEEETTEEEECSSCHHHHHHHTTCC-----SSEEEEEEECS-----CCSSSB
T ss_pred EeccCCCCCHHHHHHHH--HHHhCCCCEEEEECCccccccCHHHHHHHHHHcC-----CCCEEEEEECC-----CcccCC
Confidence 77777788999998853 34454 45888889984 4678999999986532 23444444433 334677
Q ss_pred CCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCC-----ChhhHHH
Q 007143 185 TDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNF-----DYQHLRR 259 (616)
Q Consensus 185 ~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnf-----d~q~lr~ 259 (616)
++.+|. +++++.+.+||..+ ++.+..+|+|+++++++..+..-. .++ + .
T Consensus 148 ----~v~~d~-~g~v~~~~ekp~~~-------------------~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~-~-t 201 (296)
T 1mc3_A 148 ----VVEFDD-NFRAISLEEKPKQP-------------------KSNWAVTGLYFYDSKVVEYAKQVKPSERGELE-I-T 201 (296)
T ss_dssp ----BCEEET-TEEEEECCBSCSSC-------------------SCSEEEEEEEECCTHHHHHHHSCCCCSSSSCC-H-H
T ss_pred ----EEEECC-CCcEEEEEECCCCC-------------------CCCEEEEEEEEEcHHHHHHHHhcCccccCCcc-H-H
Confidence 677774 78999999987522 134667999999999998774311 111 1 2
Q ss_pred HhhhhhhhccccCceEEEEEccccc-hhhccChhhHHHHhhhhh
Q 007143 260 HFVKGLLLDDIMGYKIFTHEIHSSY-AARIDNYRSYDIVSKDII 302 (616)
Q Consensus 260 dfv~~~l~~~i~g~~I~~~~~~~~y-~~~V~s~~sY~~a~~dil 302 (616)
|+++.++ ...++.++.+..+| |.+++++++|..++..+.
T Consensus 202 d~~~~~l----~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 202 SINQMYL----EAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp HHHHHHH----HTTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 3333332 33467777776676 999999999999987653
No 18
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.89 E-value=1.2e-22 Score=211.16 Aligned_cols=239 Identities=13% Similarity=0.187 Sum_probs=147.4
Q ss_pred CCeEEEEEeCCCCCCCCCCCC-CCCccccee-CCeehHHHHHHHHHHCCCcEEEEEcCCc-HHHHHHHHHhcCCCCCCCc
Q 007143 27 QPLQAILLADSFTTKFRPITL-ERPKVLLPL-VNVPMINYTLAWLEAAGVAEVFVFCCAH-SKQVIDYLENSEWFSQPNF 103 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~-~~PK~Llpi-~g~PlI~y~Le~L~~~Gv~eI~vv~~~~-~~~i~~~l~~~~~~~~~~~ 103 (616)
+.|+|||||+|.|+||+|+|. ..||+|+|| +|+|||+|+++.|..+ +++|+|++++. .+++++++... | ++
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~-~----~~ 76 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE-I----KN 76 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-C----SS
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-h----CC
Confidence 348999999999999999996 799999999 5999999999999999 99999999876 46888888652 3 34
Q ss_pred -EEEEEeCCCccCHHHHHHHHHhccccc-CC-EEEEeCceec-chh-HHHHHHH---HHHhhccCCCceEEEEEecCCCC
Q 007143 104 -TVKTIESHNIISAGDALRLIYEQNVIH-GD-FVLISGDTVS-NML-LTQALQE---HKERKKKDNNAVMTMIIKKSKPS 175 (616)
Q Consensus 104 -~i~~i~~~~~~~~gdalr~~~~~~~i~-~d-fLlv~gD~i~-~~~-l~~~l~~---h~~~~~~d~~a~mT~v~~~~~~~ 175 (616)
.+.++.++...|++.+++... ..+. ++ ||+++||+++ +.+ |..+++. |.+. ++.+|+.+++..+
T Consensus 77 ~~~~~i~~~~~~gt~~al~~a~--~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~t~~~~~~~~- 148 (308)
T 2qh5_A 77 KSVGFLLESLSKNTANAIALSA--LMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQK-----GFLVTFGVSIDKP- 148 (308)
T ss_dssp CEEEEEEESSCCCHHHHHHHHH--HTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHT-----TCEEEEEEECSSC-
T ss_pred CccEEEeCCCCCChHHHHHHHH--HHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhc-----CCEEEEEEecCCC-
Confidence 566777777889999998643 3454 45 9999999977 676 9999988 4442 4688988877543
Q ss_pred CCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcCC--
Q 007143 176 PITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDNF-- 252 (616)
Q Consensus 176 ~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dnf-- 252 (616)
..+|| ++.+| ..++|+.|.|||..... ...+.. .+.+.++|||+++++++ ..|....
T Consensus 149 ----~~~~g----~i~~d-~~~~V~~~~Ekp~~~~~-----~~~~~~------g~~~~n~Giy~~~~~~ll~~l~~~~p~ 208 (308)
T 2qh5_A 149 ----NTEFG----YIESP-NGLDVKRFIEKPSLDKA-----IEFQKS------GGFYFNSGMFVFQAGVFLDELKKHAPT 208 (308)
T ss_dssp ----CTTSE----EEECS-SSSBCSEEEESCCHHHH-----HHHHHH------CCEEEEEEEEEEEHHHHHHHHHHHCHH
T ss_pred ----CCCce----EEEEC-CCCEEEEEEECCChHHH-----HHHhhc------CCeEEEeEEEEEEHHHHHHHHHHhChH
Confidence 24566 66665 36899999998752100 001110 12467899999999875 4443110
Q ss_pred --------------------ChhhHHHHhhhhh----hhc-cc-cCceEEEEEccccchhhccChhhHHHHhhh
Q 007143 253 --------------------DYQHLRRHFVKGL----LLD-DI-MGYKIFTHEIHSSYAARIDNYRSYDIVSKD 300 (616)
Q Consensus 253 --------------------d~q~lr~dfv~~~----l~~-~i-~g~~I~~~~~~~~y~~~V~s~~sY~~a~~d 300 (616)
++..+..+++..+ +.. .+ .+.+++++.++ ++|.+|++|++|..++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~-~~w~digt~~~l~~~~~~ 281 (308)
T 2qh5_A 209 ILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELN-AKWSDLGNFNALFEEAAN 281 (308)
T ss_dssp HHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECC-SCCBC-------------
T ss_pred HHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECC-CceeCCCCHHHHHHHhhc
Confidence 0000011222211 111 12 45789999987 899999999999987654
No 19
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.89 E-value=2.9e-23 Score=210.08 Aligned_cols=222 Identities=9% Similarity=0.084 Sum_probs=155.1
Q ss_pred EEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHH-CCCcEEEEEcCCcHHHHHHHHHhc--CCCCCCCcEEEE
Q 007143 31 AILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEA-AGVAEVFVFCCAHSKQVIDYLENS--EWFSQPNFTVKT 107 (616)
Q Consensus 31 aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~-~Gv~eI~vv~~~~~~~i~~~l~~~--~~~~~~~~~i~~ 107 (616)
+||||||.||||+|+|..+||+|+||+|+|||+|+|+.|.. +|+++|+|++++..+ +++++.+. .|.. +.. ..+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~-~~~-~~~ 78 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGI-KQF-YIA 78 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTC-SSE-EEE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCC-CCc-eEE
Confidence 79999999999999999999999999999999999999999 799999999997654 44444331 1210 112 234
Q ss_pred EeCCCccCHHHHHHHHHhcccc-------cCCEEEEeCceec-chhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCc
Q 007143 108 IESHNIISAGDALRLIYEQNVI-------HGDFVLISGDTVS-NMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITH 179 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~~~i-------~~dfLlv~gD~i~-~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~ 179 (616)
+.++..+|+++|++... ..+ .++|||++||+++ +.++..+ .. .+..|+++.+.. +
T Consensus 79 ~~~~~~~Gt~~av~~a~--~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~-----~~~~~i~~~~~~-----~ 141 (255)
T 4evw_A 79 ELHTETRGQAETVTLGL--EELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQ-----HSDGYLEVFQGG-----G 141 (255)
T ss_dssp EESSCCSSHHHHHHHHH--HHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GG-----SSSEEEEEEECC-----S
T ss_pred EeCCCCCCHHHHHHHHH--HHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hh-----cCCcEEEEEecC-----C
Confidence 55677899999999653 344 3459999999987 5566543 11 244577776653 3
Q ss_pred ccccCCCceEEEEeCCCC--eEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhH-H-----hhhhcC
Q 007143 180 QSRLGTDELFMAIDPNTK--QLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEV-L-----SLFTDN 251 (616)
Q Consensus 180 ~~r~~~~~~vv~id~~~~--rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~v-l-----~lf~dn 251 (616)
+ +|| ++.+|. .+ +|..+.||+.. ++++.+|+|++++.. + +++..+
T Consensus 142 p-~yG----~v~~d~-~g~~~V~~i~EK~~~---------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~ 194 (255)
T 4evw_A 142 D-NWS----FAKPEH-AGSTKVIQTAEKNPI---------------------SDLCSTGLYHFNRKEDYLEAYREYVARP 194 (255)
T ss_dssp S-CSC----EEEESS-TTCCBEEEEESSSCS---------------------SSEEEEEEEEESCHHHHHHHHHHHHTSC
T ss_pred C-cee----EEEECC-CCCeEEEEEEeccCc---------------------cCcEEEeEEEECcHHHHHHHHHHHHhcc
Confidence 3 788 788875 46 99999998431 367889999999862 2 222221
Q ss_pred CChhhHHHHhhhhhhhccc-cCceEEEEEccccchhhccChhhHHHHhh
Q 007143 252 FDYQHLRRHFVKGLLLDDI-MGYKIFTHEIHSSYAARIDNYRSYDIVSK 299 (616)
Q Consensus 252 fd~q~lr~dfv~~~l~~~i-~g~~I~~~~~~~~y~~~V~s~~sY~~a~~ 299 (616)
-....-...++.++++..+ .|.+++++.++.++|.+++++++|..+.+
T Consensus 195 ~~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 195 SQEWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp GGGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred cccccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 1000001123444444433 56789999986589999999999998743
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.86 E-value=2.7e-20 Score=187.97 Aligned_cols=243 Identities=14% Similarity=0.147 Sum_probs=166.4
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
++.|||||+|.|+|| | ||+|+||+|+|||+|+++.+..+|+++|+|+++ .++|++++.. | ++++.+
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~--~----g~~v~~ 67 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA--F----GGVVCM 67 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--T----TCEEEE
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH--c----CCEEEE
Confidence 578999999999999 5 899999999999999999999999999999885 4788888875 2 456655
Q ss_pred EeCCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccC
Q 007143 108 IESHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLG 184 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~ 184 (616)
..++...|++.+...+........+ ||++.||+ +...+|..+++.|++. ++.+|+++.+.. ++.++.
T Consensus 68 ~~~~~~~Gt~~~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~-----~~~~~~~~~~v~-----~~~~~~ 137 (252)
T 3oam_A 68 TSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC-----SAPMATLAVEIE-----DEAEVF 137 (252)
T ss_dssp CCTTCCSHHHHHHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHS-----SCSEEEEEEEEC-----CHHHHT
T ss_pred cCCCCCCcHHHHHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhc-----CCCEEEEeeecC-----CHHHhh
Confidence 5556677888865543322111334 99999998 6678999999999864 356777766654 223331
Q ss_pred C-CceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhc-CCceEEEeccccceeEeeCHhHHhhhhcCCChhhHHHHhh
Q 007143 185 T-DELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAE-NPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFV 262 (616)
Q Consensus 185 ~-~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~-~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr~dfv 262 (616)
+ +...+.+| .+++++.|.++|-+... .-+.. .... -...+++.|||++++++|..|........-+.+.+
T Consensus 138 ~p~~g~vv~d-~~g~v~~fsr~~i~~~~------~~~~~~~~~~-~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~l 209 (252)
T 3oam_A 138 NPNAVKVITD-KSGYALYFSRATIPWDR------DNFAKADKAI-VQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECL 209 (252)
T ss_dssp CTTSCEEEEC-TTSBEEEEESSCSSCCH------HHHHSSSCCC-CSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTC
T ss_pred CCCceEEEEC-CCCeEEEEeCCCCCCCC------Cccccccccc-cccceEEEEEEEcCHHHHHHHHcCCCCcccccchh
Confidence 1 11256676 47899999998743211 10000 0000 01357789999999999998865321110011222
Q ss_pred hhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 263 KGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 263 ~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
..+ .....|.+|+++..++.+|.+|+++++|..+.+.+-+
T Consensus 210 e~l-r~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~ 249 (252)
T 3oam_A 210 EQL-RVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAE 249 (252)
T ss_dssp TTH-HHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred HHH-HHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHh
Confidence 111 1112588999987765789999999999998776543
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.85 E-value=1.7e-21 Score=196.97 Aligned_cols=221 Identities=14% Similarity=0.220 Sum_probs=153.0
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
+.|.|||||+|.|+||+|+|...||+|+|++|+|||+|+|+.|..+|+++|+|++++..++++++... | + +.
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~--~----~--~~ 95 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK--Y----G--VR 95 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH--H----C--CE
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh--C----C--cE
Confidence 35899999999999999999999999999999999999999999999999999999877777655432 3 2 34
Q ss_pred EEeCCC--ccCHHHHHHHHHhcccccCCEEEEeCceecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccC
Q 007143 107 TIESHN--IISAGDALRLIYEQNVIHGDFVLISGDTVSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLG 184 (616)
Q Consensus 107 ~i~~~~--~~~~gdalr~~~~~~~i~~dfLlv~gD~i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~ 184 (616)
++..+. ..|++++++. +...+. ++++++||+++..++ ++.+.+ +++.+|+.... +. .+++
T Consensus 96 iv~~~~~~~~g~~~al~~--a~~~~~-~~lv~~~D~~~~~~~---~~~~~~-----~~~~~t~~~~~--~~-----~~~~ 157 (254)
T 1jyk_A 96 LVFNDKYADYNNFYSLYL--VKEELA-NSYVIDADNYLFKNM---FRNDLT-----RSTYFSVYRED--CT-----NEWF 157 (254)
T ss_dssp EEECTTTTTSCTHHHHHT--TGGGCT-TEEEEETTEEESSCC---CCSCCC-----SEEEEECEESS--CS-----SCCE
T ss_pred EEECCCccCCCcHHHHHH--HHHHCC-CEEEEeCCcccCHHH---HHHHHh-----CCceEEEEccc--CC-----CCeE
Confidence 454433 4678888774 344453 699999999765443 222221 23556654322 11 1333
Q ss_pred CCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCCh--h--hHHHH
Q 007143 185 TDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDY--Q--HLRRH 260 (616)
Q Consensus 185 ~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~--q--~lr~d 260 (616)
+.+|. +++|+.+.++|. ..+..+|||+++++.+..|.+-... . .....
T Consensus 158 -----v~~d~-~g~v~~~~e~~~----------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~ 209 (254)
T 1jyk_A 158 -----LVYGD-DYKVQDIIVDSK----------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDL 209 (254)
T ss_dssp -----EEECT-TCBEEEEECCCS----------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTC
T ss_pred -----EEECC-CCeEEEEEECCC----------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCcccc
Confidence 34664 689999988642 2367889999999866544321100 0 00112
Q ss_pred hhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhh
Q 007143 261 FVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDI 301 (616)
Q Consensus 261 fv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~di 301 (616)
++..++...+.+.+++++.+++++|.+|+++++|..+.+.+
T Consensus 210 ~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l 250 (254)
T 1jyk_A 210 YWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEIL 250 (254)
T ss_dssp CTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHh
Confidence 33444444456788999988768999999999999987654
No 22
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.85 E-value=5.5e-21 Score=200.96 Aligned_cols=236 Identities=13% Similarity=0.168 Sum_probs=163.5
Q ss_pred eEEEEEeCCCCCCCCCCC-CCCCcccceeCC-eehHHHHHHHHHHC-CCcEEEEEcCCc-HHHHHHHHHhcCCCCCCCcE
Q 007143 29 LQAILLADSFTTKFRPIT-LERPKVLLPLVN-VPMINYTLAWLEAA-GVAEVFVFCCAH-SKQVIDYLENSEWFSQPNFT 104 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT-~~~PK~Llpi~g-~PlI~y~Le~L~~~-Gv~eI~vv~~~~-~~~i~~~l~~~~~~~~~~~~ 104 (616)
|++||||+|.|+||+||| ...||+|+|++| +|||+|+++.|..+ |+++|+|++++. .+.+++++.... ...
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~-----~~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP-----DEN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC-----GGG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc-----cce
Confidence 799999999999999999 779999999999 99999999999997 899999999875 677888886531 112
Q ss_pred EEEEeCCCccCHHHHHHHHHhccccc-CC-EEEEeCceecch--hHHHHHH----HHHHhhccCCCceEEEEEecCCCCC
Q 007143 105 VKTIESHNIISAGDALRLIYEQNVIH-GD-FVLISGDTVSNM--LLTQALQ----EHKERKKKDNNAVMTMIIKKSKPSP 176 (616)
Q Consensus 105 i~~i~~~~~~~~gdalr~~~~~~~i~-~d-fLlv~gD~i~~~--~l~~~l~----~h~~~~~~d~~a~mT~v~~~~~~~~ 176 (616)
++.++..+|++.++..... .+. ++ ||+++||++... +|..+++ .|++. ++.+|+.+++..|
T Consensus 77 --ii~e~~~~gta~ai~~a~~--~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~-----~~~vt~~i~p~~~-- 145 (336)
T 2x65_A 77 --IIAEPMKKNTAPACFIGTK--LADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKY-----DGLFTFGIVPTRP-- 145 (336)
T ss_dssp --EEEESSCCCHHHHHHHHHT--TSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHH-----CSEEEEEECCCSC--
T ss_pred --EEeCCCCCCcHHHHHHHHH--hhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhc-----CCeEEEEeecccC--
Confidence 3555677899999986543 343 34 899999996532 5554444 45542 3688988877654
Q ss_pred CCcccccCCCceEEEEeCC----CCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcC
Q 007143 177 ITHQSRLGTDELFMAIDPN----TKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDN 251 (616)
Q Consensus 177 ~~~~~r~~~~~~vv~id~~----~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dn 251 (616)
.++|| ++..+.. .++|..|.|||..... ...+.. ...+.++|||+++++++ ..|...
T Consensus 146 ---~~~yG----~I~~~~~~~~~~~~V~~f~EKp~~~~a-----~~~~~~------g~y~~n~Giy~~~~~~ll~~l~~~ 207 (336)
T 2x65_A 146 ---ETGYG----YIEIGEELEEGVHKVAQFREKPDLETA-----KKFVES------GRFLWNSGMFLWKAREFIEEVKVC 207 (336)
T ss_dssp ---CSSSE----EEEEEEEEETTEEEEEEEEESCCHHHH-----HHHHHH------TCEEEEEEEEEEEHHHHHHHHHHH
T ss_pred ---CCCce----EEEECCccCCCccEEEEEEECCChHHH-----HHHHhc------CCeEEEeeeEEEEHHHHHHHHHHH
Confidence 24676 6766631 2789999999862100 001110 01366799999999887 444321
Q ss_pred CC--hhhH------HHHhhhhhhhc----------cccCceEEEEEccccchhhccChhhHHHHhhh
Q 007143 252 FD--YQHL------RRHFVKGLLLD----------DIMGYKIFTHEIHSSYAARIDNYRSYDIVSKD 300 (616)
Q Consensus 252 fd--~q~l------r~dfv~~~l~~----------~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~d 300 (616)
.. ++.. ..+|+..++.. ...+.+++++.++ ++|.+|++|.+|.++ +|
T Consensus 208 ~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~-~~W~DiGt~~~l~~~-~d 272 (336)
T 2x65_A 208 EPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKAD-FEWSDLGNWSSVREI-EG 272 (336)
T ss_dssp CHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECS-SCCBCCCSHHHHHHH-HC
T ss_pred CHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEec-CCCcCCCCHHHHHhh-hc
Confidence 10 0000 00344433332 1235789999987 899999999999998 55
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.84 E-value=1.5e-20 Score=197.77 Aligned_cols=237 Identities=14% Similarity=0.183 Sum_probs=160.5
Q ss_pred CeEEEEEeCCCCCCCCCCC-CCCCcccceeCC-eehHHHHHHHHHHC-CCcEEEEEcCCc-HHHHHHHHHhcCCCCCCCc
Q 007143 28 PLQAILLADSFTTKFRPIT-LERPKVLLPLVN-VPMINYTLAWLEAA-GVAEVFVFCCAH-SKQVIDYLENSEWFSQPNF 103 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT-~~~PK~Llpi~g-~PlI~y~Le~L~~~-Gv~eI~vv~~~~-~~~i~~~l~~~~~~~~~~~ 103 (616)
.|.+||||+|.|+||+|+| ...||+|+|++| +|||+|+++.|..+ |+++|+|++++. ...+.+++.. .
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~--------~ 73 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG--------I 73 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS--------S
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc--------C
Confidence 4899999999999999999 689999999999 99999999999998 899999999875 5666666543 2
Q ss_pred EEEEEeCCCccCHHHHHHHHHhcccc-cCC-EEEEeCceecc--hhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCc
Q 007143 104 TVKTIESHNIISAGDALRLIYEQNVI-HGD-FVLISGDTVSN--MLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITH 179 (616)
Q Consensus 104 ~i~~i~~~~~~~~gdalr~~~~~~~i-~~d-fLlv~gD~i~~--~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~ 179 (616)
.+ +.++..+|++.++......... .++ ||+++||++.. ..|..+++...+..+ .++.+|+.+++..+
T Consensus 74 ~~--i~e~~~~gta~ai~~a~~l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~--~~~~vt~~i~p~~~----- 144 (337)
T 2cu2_A 74 RL--LLEPLGRDTAGAVLLGVAEALKEGAERLLVLPADHYVGDDEAYREALATMLEAAE--EGFVVALGLRPTRP----- 144 (337)
T ss_dssp EE--EEESSCCHHHHHHHHHHHHHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCC--TTCEEEEEECCSSC-----
T ss_pred ce--EecCCCCCcHHHHHHHHHHhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHH--cCCeEEEeeccCCC-----
Confidence 33 4456678999988865430001 133 99999999653 356666665433221 14788998887653
Q ss_pred ccccCCCceEEEEeCC---CCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHH-hhhhcCCC--
Q 007143 180 QSRLGTDELFMAIDPN---TKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVL-SLFTDNFD-- 253 (616)
Q Consensus 180 ~~r~~~~~~vv~id~~---~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl-~lf~dnfd-- 253 (616)
.++|| ++..+.+ .++|..|.|||..... ...+.. ..+.++|||+++++++ ..|.....
T Consensus 145 ~t~yG----~I~~~~~~~~~~~V~~f~EKp~~~~a-----~~~~~~-------g~~~n~Giy~f~~~~ll~~l~~~~p~~ 208 (337)
T 2cu2_A 145 ETEYG----YIRLGPREGAWYRGEGFVEKPSYAEA-----LEYIRK-------GYVWNGGVFAFAPATMAELFRRHLPSH 208 (337)
T ss_dssp CSSSC----EEEEEEEETTEEEEEEEECCCCHHHH-----HHHHHT-------TCEEEEEEEEECHHHHHHHHHHHCHHH
T ss_pred CCCce----EEEECCcccccCeEEEEEeCCChHHH-----HHHhhc-------CCEEEEEEEEEeHHHHHHHHHHHCHHH
Confidence 24677 7776632 2789999999852100 011110 0367899999999987 55543210
Q ss_pred hhhHH--------HHhhhhhhh------ccccCceEEEEEccccchhhccChhhHHHHh
Q 007143 254 YQHLR--------RHFVKGLLL------DDIMGYKIFTHEIHSSYAARIDNYRSYDIVS 298 (616)
Q Consensus 254 ~q~lr--------~dfv~~~l~------~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~ 298 (616)
++..+ .+.+..+-. -...+.+++++.++ ++|.+|++|.+|+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~-~~W~DvGt~~~l~~~~ 266 (337)
T 2cu2_A 209 HEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGR-FPWDDVGNWRALERVF 266 (337)
T ss_dssp HHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEEC-SCEECCCSTTHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeC-CcEEcCCCHHHHHHHh
Confidence 11111 111221100 01245689999887 8999999999999874
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.78 E-value=1.2e-17 Score=168.63 Aligned_cols=241 Identities=13% Similarity=0.098 Sum_probs=152.4
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
+++.|||||+|.|+||. ||+|+||+|+|||+|+++.+..+|+++|+|++. .+.+++++.. + ++++.
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~--~----g~~v~ 73 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED--F----GAVVC 73 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--T----TCEEE
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--c----CCeEE
Confidence 45899999999999994 899999999999999999999999999999886 3788888865 2 35555
Q ss_pred EEeCCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccccc
Q 007143 107 TIESHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRL 183 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~ 183 (616)
+..++...|++.+...+.....-..+ |+++.||. +....+..+++.|++. +++.+++++.+... ..++
T Consensus 74 ~~~~~~~~Gt~~i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~----~~~~~a~l~~~v~~-----~~~~ 144 (256)
T 3tqd_A 74 MTSSDHQSGTERIAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEH----DNVKVASLCTPITE-----VDEL 144 (256)
T ss_dssp ECCTTCCSHHHHHHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHC----C--CEEEEEEECCC-----HHHH
T ss_pred EeCCCCCCcHHHHHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhC----CCCCEEEEeeEcCC-----HHHh
Confidence 44445556777633322211111234 99999999 5577899999999763 23444444444321 1122
Q ss_pred CC-CceEEEEeCCCCeEEEeeecCCCCCcc-eEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHH-HH
Q 007143 184 GT-DELFMAIDPNTKQLLYYEDKADHSKGT-ICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLR-RH 260 (616)
Q Consensus 184 ~~-~~~vv~id~~~~rvl~~~e~p~~~~~~-~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr-~d 260 (616)
.+ +..-+++| .++++++|.++|.+.... +.-...+... .+.+...|||.+++++|..|..--.- .+. .+
T Consensus 145 ~~p~~vkvv~d-~~g~~l~fsr~pip~~r~~~~~~~~~~~~------~~~~~~~GiY~y~~~~l~~~~~l~~s-~lE~~e 216 (256)
T 3tqd_A 145 FNPHSTKVVLN-RRNYALYFSHAPIPWGRDTFSDKENLQLN------GSHYRHVGIYAYRVGFLEEYLSWDAC-PAEKME 216 (256)
T ss_dssp TCTTSCEEEEC-TTSBEEEEESSCSSCCTTTTTCGGGCCCS------SCCEEEEEEEEEEHHHHHHHHHSCCC-HHHHHH
T ss_pred hCCCccEEEEC-CCCEEeEEecCCCCCCCcccccccccccC------CcceEEEEEEEcCHHHHHHHHhCCCC-cccchh
Confidence 21 11235677 489999999987632110 0000000000 13577899999999999988753111 111 11
Q ss_pred hhhhhhhccccCceEEEEEccccchhhccChhhHHHHhh
Q 007143 261 FVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSK 299 (616)
Q Consensus 261 fv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~ 299 (616)
.+..+ .-...|.+|+++.++..+|.+|+++++|..+.+
T Consensus 217 ~leql-r~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 217 ALEQL-RILWHGGRIHMVVAKSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp TCTTH-HHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred hhHHH-HHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 11111 112368899999987445899999999998754
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.78 E-value=1.2e-17 Score=169.42 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=158.4
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEE
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i 105 (616)
.+.+.|||||+|.|+|| | +|+|+||+|+|||+|+++.+..+|+++|+|++. .+.+++++.. + ++++
T Consensus 16 ~M~~~aIIlA~G~stRl-p-----~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~--~----g~~v 81 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRL-P-----GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEA--A----GGEV 81 (264)
T ss_dssp --CCEEEEECCSCCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--T----TCEE
T ss_pred CCceEEEEEcCCCCCCC-C-----CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--c----CCEE
Confidence 34589999999999999 3 599999999999999999999999999999885 4778888765 2 3455
Q ss_pred EEEeCCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 106 KTIESHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
.+..++...|++.....+........+ ||++.||. +....+..+++.|++. ++.++++..+.. ...+
T Consensus 82 ~~~~~~~~~Gt~~i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~-----~~~~~~~~~~v~-----d~~~ 151 (264)
T 3k8d_A 82 CMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQR-----QVGMATLAVPIH-----NAEE 151 (264)
T ss_dssp EECCTTCCSHHHHHHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTS-----SCSEEEEEEECC-----SHHH
T ss_pred EEecCCCCCCHHHHHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc-----CCCEEEEEEEcC-----CHHH
Confidence 444455566777633332221112334 99999998 6678999999999753 466676666654 2223
Q ss_pred cCCCc-eEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHH-HH
Q 007143 183 LGTDE-LFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLR-RH 260 (616)
Q Consensus 183 ~~~~~-~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr-~d 260 (616)
+++.. .-+++| .++++++|.++|.+..+ +-+.....-.-...+...|||.++++++..|..--. ..+. .+
T Consensus 152 ~~~p~~vkVv~d-~~g~~l~fsr~~ip~~r------~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~-~~lE~~e 223 (264)
T 3k8d_A 152 AFNPNAVKVVLD-AEGYALYFSRATIPWDR------DRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQP-SPLEHIE 223 (264)
T ss_dssp HTCTTSCEEEEC-TTSBEEEEESSCCSCCH------HHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCC-CHHHHHH
T ss_pred ccCCCceEEEEC-CCCeEEEEecCCCCCCC------ccccccccccCCcceEEEEEEEECHHHHHHHHhCCC-ChhhhHH
Confidence 33222 234567 48999999998753211 111000000001356789999999999998864211 1111 11
Q ss_pred hhhhhhhccccCceEEEEEccccchhhccChhhHHHHhh
Q 007143 261 FVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSK 299 (616)
Q Consensus 261 fv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~ 299 (616)
.+.. |.-...|.+|+++...+.+|..|+++++|..+.+
T Consensus 224 ~leq-lr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~ 261 (264)
T 3k8d_A 224 MLEQ-LRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRA 261 (264)
T ss_dssp TCTT-HHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHH
T ss_pred HHHH-HHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 1111 1111358899999776578999999999998764
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.74 E-value=9.5e-17 Score=159.36 Aligned_cols=226 Identities=17% Similarity=0.117 Sum_probs=150.7
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
++.|||||+|.|+||+ ||+|+|++|+|||+|+++.|..+ +++|+|++++ +++.+++.+ + ..+.+
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~--~-----~~~~~ 65 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS--ERVKEVVED--L-----CEVFL 65 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT--T-----SEEEE
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh--c-----eEEEE
Confidence 4789999999999997 89999999999999999999999 9999999876 678888754 1 23433
Q ss_pred EeCCCccCHHHHHHHHHhcccccCC-EEEEeCce-ecc-hhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccC
Q 007143 108 IESHNIISAGDALRLIYEQNVIHGD-FVLISGDT-VSN-MLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLG 184 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~-i~~-~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~ 184 (616)
.......|++.++..+ ..+..+ |+++.||+ +.+ .++..+++.|++.. ..+|++..... ....++
T Consensus 66 ~~~~~~~g~~~~~~~~---~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~-----~~~~~~~~~~~-----~~~~~~ 132 (234)
T 2y6p_A 66 TPSDLPSGSDRVLYVV---RDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGE-----RVVTLARKDKE-----AYERPE 132 (234)
T ss_dssp CCTTCCSHHHHHHHHH---TTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTC-----SEEEEEEECSG-----GGGCTT
T ss_pred CCcccccchHHHHHHH---HhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCC-----CeEEEecCCHH-----HhcCCC
Confidence 2233456777776532 233444 99999999 766 78999999997642 46676665211 001111
Q ss_pred CCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHHHHhhhh
Q 007143 185 TDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKG 264 (616)
Q Consensus 185 ~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr~dfv~~ 264 (616)
..-+.++ .++++..+.++|.+..... ... ..+...|+|+++++++..+........-..+++..
T Consensus 133 --~~~~~~~-~~g~v~~~~e~~~~~~~~~----------~~~---~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~ 196 (234)
T 2y6p_A 133 --DVKVVLD-REGYALYFSRSPIPYFRKN----------DTF---YPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQ 196 (234)
T ss_dssp --SCEEEEC-TTSBEEEEESSCCSCCSSC----------CSS---CCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTH
T ss_pred --ceEEEEc-CCCCEeeeecCCCCccccc----------ccc---eeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHH
Confidence 1123345 4689999988764210100 000 23457899999999887654321110001233322
Q ss_pred hhhccccCceEEEEEccccchhhccChhhHHHHhhh
Q 007143 265 LLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKD 300 (616)
Q Consensus 265 ~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~d 300 (616)
+.....|.+++++..+ ++|.+|+++++|..++..
T Consensus 197 -~~~~~~g~~v~~~~~~-~~~~dI~t~~dl~~a~~~ 230 (234)
T 2y6p_A 197 -LRLLENGIKIKVLITE-NYYHGVDTEEDLKIVEEK 230 (234)
T ss_dssp -HHHHHTTCCCEEEECC-SCCCCCCSHHHHHHHHHH
T ss_pred -HHHHHCCCeEEEEEeC-CcccCCCCHHHHHHHHHH
Confidence 1111247899999998 899999999999988654
No 27
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.73 E-value=3.5e-17 Score=162.70 Aligned_cols=211 Identities=14% Similarity=0.177 Sum_probs=128.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
.|.|||||+|.|+||+|+ ||+|+|++|+|||+|+++.|..+ +++|+|++ +..+++.+++.. .| +..+.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~-~~----~~~~~~ 86 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLK-DK----GFNYKI 86 (232)
T ss_dssp CEEEEEEECC------CC----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHT-TS----CCCEEE
T ss_pred cceEEEECCcCcCcCCCC----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHH-hc----CCcEEE
Confidence 489999999999999986 99999999999999999999999 99999998 667778777643 33 245677
Q ss_pred EeCCCc-cCHHHHHHHHHhcccccCCEEEEeCceecchhH-HHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCC
Q 007143 108 IESHNI-ISAGDALRLIYEQNVIHGDFVLISGDTVSNMLL-TQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGT 185 (616)
Q Consensus 108 i~~~~~-~~~gdalr~~~~~~~i~~dfLlv~gD~i~~~~l-~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~ 185 (616)
+.++.. .|++++++. +...+.++|++++||+..+.++ +.+++ .. . +++....... ....+
T Consensus 87 v~~~~~~~g~~~~i~~--a~~~~~~~~lv~~~D~p~~~~~~~~l~~----~~-----~--~~~~~~~~~~---~~~~~-- 148 (232)
T 2xme_A 87 VRHDRPEKGNGYSLLV--AKNHVEDRFILTMGDHVYSQQFIEKAVR----GE-----G--VIADREPRFV---DIGEA-- 148 (232)
T ss_dssp EECSCGGGCHHHHHHT--TGGGCCSSEEEEETTEEECHHHHHHHTT----CC-----E--EEEESSCSSS---CTTTS--
T ss_pred EECCCCCCCcHHHHHH--HHHHCCCCEEEEcCCcccCHHHHHHHHh----CC-----C--cEEEcccccc---CCCcc--
Confidence 765544 788888885 3444566799999999766553 44432 11 1 2222221100 01112
Q ss_pred CceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHHHHhhhhh
Q 007143 186 DELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGL 265 (616)
Q Consensus 186 ~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr~dfv~~~ 265 (616)
..+..+ ++++..+.+++. +++++.+|+|+++|++++.+.+...-. ...+..+
T Consensus 149 --~~v~~~--~g~v~~~~~~~~---------------------~~~~~~~g~~~~~~~~~~~l~~~~~~g---~~~l~~l 200 (232)
T 2xme_A 149 --TKIRVE--DGRVAKIGKDLR---------------------EFDCVDTGFFVLDDSIFEHAEKLRDRE---EIPLSEI 200 (232)
T ss_dssp --CEEEEE--TTEEEEEETTCS---------------------SCSEEEEEEEEECTTHHHHHGGGTTSS---CCCHHHH
T ss_pred --eEEEEc--CCEEEEeecCCC---------------------CcceEEEEEEEECHHHHHHHHHHHhcC---hhHHHHH
Confidence 245555 578888887653 124557899999999998776532000 0112223
Q ss_pred hhccccCceEEEEEccccchhhccChhhHHHHhh
Q 007143 266 LLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSK 299 (616)
Q Consensus 266 l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~ 299 (616)
+.. .++..+.+++++|.+|+++++|..+++
T Consensus 201 l~~----~~v~~~~~~~~~~~dI~tpeDl~~a~~ 230 (232)
T 2xme_A 201 VKL----ARLPVTYVDGELWMDVDTKEDVRRANR 230 (232)
T ss_dssp HHH----HTCBEEECCSCCEEEEECC--------
T ss_pred HHc----CCEEEEEECCCCEEeCCCHHHHHHHHh
Confidence 322 135555665578999999999987654
No 28
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.71 E-value=4.7e-16 Score=168.88 Aligned_cols=243 Identities=9% Similarity=0.078 Sum_probs=161.9
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeC-CeehHHHHHHHHHHC----CCc-EEEEEcCCc-HHHHHHHHHhcCCCC
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLV-NVPMINYTLAWLEAA----GVA-EVFVFCCAH-SKQVIDYLENSEWFS 99 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~-g~PlI~y~Le~L~~~----Gv~-eI~vv~~~~-~~~i~~~l~~~~~~~ 99 (616)
.++.+||||||.||||+ ...||+|+|++ |+|+|+|+++.|.+. |+. .++|+++++ .+++++|+++..+.
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~f- 153 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNS- 153 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTS-
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccC-
Confidence 36899999999999995 58899999999 999999999999987 533 456666654 88999999875443
Q ss_pred CCCcEEEEEeCC------------------------CccCHHHHHHHHHhc----cccc---CCEEEEeCceecchhHHH
Q 007143 100 QPNFTVKTIESH------------------------NIISAGDALRLIYEQ----NVIH---GDFVLISGDTVSNMLLTQ 148 (616)
Q Consensus 100 ~~~~~i~~i~~~------------------------~~~~~gdalr~~~~~----~~i~---~dfLlv~gD~i~~~~l~~ 148 (616)
+++|.++.+. .+.|+|++++.+... .++. ..|+|.++|.++......
T Consensus 154 --G~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ 231 (469)
T 2icy_A 154 --NVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLT 231 (469)
T ss_dssp --SSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHH
T ss_pred --CceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHH
Confidence 4677765432 457999999875322 2232 349999999988764457
Q ss_pred HHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEE
Q 007143 149 ALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISL 228 (616)
Q Consensus 149 ~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~i 228 (616)
++..|.++ ++.+||.+.+.... ..++| ++.......+++.|.++|... ..-|+.. .
T Consensus 232 ll~~~~~~-----~a~~t~~v~~k~~~----~~~~G----vl~~~dg~~~vvE~~e~p~~~-------~~e~k~~----~ 287 (469)
T 2icy_A 232 ILKHLIQN-----KNEYCMEVTPKTLA----DVKGG----TLISYEGKVQLLEIAQVPDEH-------VNEFKSI----E 287 (469)
T ss_dssp HHHHHHHH-----TCSEEEEEEECCTT----CCSSC----EEEEETTEEEEECGGGSCGGG-------HHHHHSS----S
T ss_pred HHHHHHHc-----CCCeeEEEEEeccC----CCcee----EEEEECCEEEEEEEeccChhh-------hhhhccc----c
Confidence 88999876 47788877665411 13566 555432234577777776421 0112211 1
Q ss_pred EeccccceeEeeCHhHHhhhhcCC--ChhhH-------------HHHhhhhhhhccccCceEEEEEccccchhhccChhh
Q 007143 229 HNDKQDCYIDICSPEVLSLFTDNF--DYQHL-------------RRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRS 293 (616)
Q Consensus 229 r~dl~d~gIyIcsp~vl~lf~dnf--d~q~l-------------r~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~s 293 (616)
.+.+.++++|+++++++..+.++. +.... -+.|+-+++. .-....++.++..+|..|.+..+
T Consensus 288 ~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~---~~~~~~~~~V~R~~F~PvKn~~d 364 (469)
T 2icy_A 288 KFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIR---FFDNAIGVNVPRSRFLPVKASSD 364 (469)
T ss_dssp SCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGG---GSTTCEEEECCGGGCCBCCSHHH
T ss_pred ccceeeEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHH---hcCCeEEEEechhHcCcCCCHHH
Confidence 245668999999999998776542 11000 0011112221 11245666676678999999999
Q ss_pred HHHHhhhhh
Q 007143 294 YDIVSKDII 302 (616)
Q Consensus 294 Y~~a~~dil 302 (616)
+..+..++.
T Consensus 365 ll~~~s~l~ 373 (469)
T 2icy_A 365 LLLVQSDLY 373 (469)
T ss_dssp HHHHHSTTE
T ss_pred HHHHHHHHH
Confidence 998888744
No 29
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.71 E-value=4.5e-17 Score=173.71 Aligned_cols=74 Identities=15% Similarity=0.062 Sum_probs=42.9
Q ss_pred EEEEeCceecch--hHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCCCceEEEEeCCC-CeEEEeeecCCCC
Q 007143 133 FVLISGDTVSNM--LLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGTDELFMAIDPNT-KQLLYYEDKADHS 209 (616)
Q Consensus 133 fLlv~gD~i~~~--~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~~~-~rvl~~~e~p~~~ 209 (616)
=|+--||+++++ +|.+++++|. .|+.. .+ ....++ +..++... ++| .|.++|...
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~----------~tl~g---~~----~~~~~G----v~~ld~a~~g~I-~F~ekPk~~ 70 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK----------VEFQG---NG----ATLLSG----VEEIEEAKTAHI-TFLDNEKYA 70 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT----------CEEES---CT----TCEECE----ECCTTTCCTTEE-EECCSSSTH
T ss_pred CcccCccccccCcCcHHHHHHhhC----------CEEEC---CC----cceEEE----EeccccCCCCeE-EEEeCchhh
Confidence 456678999997 9999999885 14443 11 233455 55666433 566 999987521
Q ss_pred CcceEeehHhhhcCCceEEEeccccceeEeeCHhHHh
Q 007143 210 KGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLS 246 (616)
Q Consensus 210 ~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~ 246 (616)
+. ..+..+++||++++++.
T Consensus 71 -------~~-----------~~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 71 -------KH-----------LKSSEAGAIIISRTQFQ 89 (374)
T ss_dssp -------HH-----------HHTCCCSEEEEEHHHHH
T ss_pred -------hh-----------hhcCCcEEEEeChhHhh
Confidence 11 14567899999998774
No 30
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.69 E-value=2.3e-15 Score=152.42 Aligned_cols=239 Identities=13% Similarity=0.107 Sum_probs=147.2
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
++.|||||+|.|+|| | +|+|+|++|+|||+|+++.|..+|+++|+|++++ +.+.+++... ++.+
T Consensus 2 ~~~aiIlA~G~g~R~-~-----~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~~------~~~~-- 65 (262)
T 1vic_A 2 SFTVIIPARFASSRL-P-----GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKSF------GAEV-- 65 (262)
T ss_dssp CCEEEEECCCCCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHT------TCEE--
T ss_pred CcEEEEEcCCCCCCC-C-----CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHhc------CCEE--
Confidence 478999999999999 4 5999999999999999999999999999999875 5677777641 3343
Q ss_pred EeC--CCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccc
Q 007143 108 IES--HNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSR 182 (616)
Q Consensus 108 i~~--~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r 182 (616)
+.. ....|++.+...+........+ ||++.||+ +...++..+++.|++.. +.+++++.+..... ....
T Consensus 66 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~-----~~~~~~~~~~~~~~--~~~~ 138 (262)
T 1vic_A 66 CMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN-----VNMASLAVKIHDAE--ELFN 138 (262)
T ss_dssp EECCCSSCCHHHHHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHT-----CSEEEEEEECCCHH--HHTC
T ss_pred EECCccccCChHHHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcC-----CCEEEEEEecCCHH--HhcC
Confidence 432 2345666332222221212334 89999998 56779999999988752 34444444432100 0001
Q ss_pred cCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhh--------hcCCceEEEeccccceeEeeCHhHHhhhhcCCCh
Q 007143 183 LGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLL--------AENPSISLHNDKQDCYIDICSPEVLSLFTDNFDY 254 (616)
Q Consensus 183 ~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~--------~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~ 254 (616)
++ -..+..+ ..++++.|.+++-+.. ..-. ...|. ..+.+.|+|+++++++..+......
T Consensus 139 ~~--~~~~~~~-~~g~v~~f~~~~~~~~------r~~~~~~~~~~~~~~p~----~~~~~~giy~~~~~~l~~~~~~~~~ 205 (262)
T 1vic_A 139 PN--AVKVLTD-KDGYVLYFSRSVIPYD------RDQFMNLQDVQKVQLSD----AYLRHIGIYAYRAGFIKQYVQWAPT 205 (262)
T ss_dssp TT--SCEEEEC-TTSBEEEEESSCSSCC------HHHHTTCSCGGGCCCCT----TCEEEEEEEEEEHHHHHHHHHSCCC
T ss_pred CC--ceEEEEC-CCCCEeeeecCCCCcC------Ccccccccccccccccc----ceEEEEEEEEeeHHHHHHHHhCCCC
Confidence 11 0123335 4678888877642110 1100 01111 1356789999999988765321100
Q ss_pred hhHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhhhc
Q 007143 255 QHLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDIIQ 303 (616)
Q Consensus 255 q~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~dil~ 303 (616)
..-...++..+ .-...|.+++++..++.+|.+|+++++|..+...+-.
T Consensus 206 ~~~~~e~~~~~-~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~ 253 (262)
T 1vic_A 206 QLENLEKLEQL-RVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAA 253 (262)
T ss_dssp HHHHHHTCTTH-HHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred chhhhhhHHHH-HHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHh
Confidence 00001112111 1011478999999865799999999999988776543
No 31
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.69 E-value=1.1e-15 Score=154.14 Aligned_cols=243 Identities=12% Similarity=0.068 Sum_probs=153.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHH-HHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTL-AWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~L-e~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
+.|||||+|.|+||. +|+|+||+|+|||+|++ +.+..+++++|+|++++ +.+.+++.. + ++++..
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~~--~----g~~v~~ 67 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD--ERIAEICRA--E----GVDVVL 67 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHT--T----TCCEEE
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHHH--c----CCeEEE
Confidence 469999999999997 59999999999999999 99999999999999964 778887754 1 344443
Q ss_pred EeCCCccCHHHHHHHHHhc-ccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccccc
Q 007143 108 IESHNIISAGDALRLIYEQ-NVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRL 183 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~-~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~ 183 (616)
..+....|++ ++...... .....+ ||++.||. +....+..+++.|++.. ...++|++.+-..+. ....+
T Consensus 68 ~~~~~~~Gt~-~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~---~~~~at~~~~~~~~~---~~~~p 140 (253)
T 4fcu_A 68 TSADHPSGTD-RLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP---NCSMSTLCEPIHALD---EFQRD 140 (253)
T ss_dssp CCTTCCCHHH-HHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCT---TCSEEEEEEECCCHH---HHHCT
T ss_pred eCCCCCChHH-HHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCC---CCCEEEEeEEcCCHH---HccCC
Confidence 3333444553 33332211 111234 99999999 56679999999998742 124566665421110 00011
Q ss_pred CCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhH-HHHhh
Q 007143 184 GTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHL-RRHFV 262 (616)
Q Consensus 184 ~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~l-r~dfv 262 (616)
+ ..-++.| .++++++|.++|-+..+. -+.......-...+.+.|||.+++++|..|.....- .+ ..+.+
T Consensus 141 ~--~~kvv~d-~~g~~l~fsr~~ip~~r~------~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~-~le~~e~l 210 (253)
T 4fcu_A 141 S--IVKVVMS-KQNEALYFSRATIPYDRD------GAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMG-KLEKLESL 210 (253)
T ss_dssp T--SCEEEEC-TTSBEEEEESSCCSCCTT------TSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCC-HHHHHHTC
T ss_pred C--ccEEEEC-CCCeEEEecCCCCCCCCC------cccccccccccceeEEEEEEEeCHHHHHHHHhCCCC-cccchhHH
Confidence 1 1124566 489999999977532111 000000000012355889999999999988742111 11 11212
Q ss_pred hhhhhccccCceEEEEEccccc-hhhccChhhHHHHhhhhhcc
Q 007143 263 KGLLLDDIMGYKIFTHEIHSSY-AARIDNYRSYDIVSKDIIQR 304 (616)
Q Consensus 263 ~~~l~~~i~g~~I~~~~~~~~y-~~~V~s~~sY~~a~~dil~r 304 (616)
..+ .-...|.+|+++..+ .+ |.+|+++++|..+.+.+-+|
T Consensus 211 e~l-r~l~~G~~I~~~~~~-~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 211 EQL-RVLENGHRIAIAVAE-ANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp TTH-HHHHTTCCEEEEECS-SCCCCCCCSHHHHHHHHTSCGGG
T ss_pred HHH-HHHHCCCceEEEEeC-CCCCCCCCCHHHHHHHHHHHHhh
Confidence 111 111268899999986 78 99999999999997765444
No 32
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.69 E-value=1.4e-15 Score=152.04 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=146.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCC-cEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGV-AEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv-~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
++.|||||+|.|+|| | ||+|+|++|+|||+|+++.+..+|+ ++|+|++++ +++.+++... ++.+
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~------~~~~- 66 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF------GGKA- 66 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT------TCEE-
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc------CCeE-
Confidence 478999999999999 6 9999999999999999999999996 999999976 7788887652 2333
Q ss_pred EEe--CCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccc
Q 007143 107 TIE--SHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQS 181 (616)
Q Consensus 107 ~i~--~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~ 181 (616)
+. ++...|++.++..+.. +..+ |+++.||+ +....+..+++.|++. +++.+++.+.+..+. ...
T Consensus 67 -~~~~~~~~~g~~~~~~~~~~---~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~----~~~~~~~~~~~~~~~---~~~ 135 (245)
T 1h7e_A 67 -IMTRNDHESGTDRLVEVMHK---VEADIYINLQGDEPMIRPRDVETLLQGMRDD----PALPVATLCHAISAA---EAA 135 (245)
T ss_dssp -EECCSCCSSHHHHHHHHHHH---SCCSEEEECCTTCTTCCHHHHHHHHHHHHHC----TTCCEEEEEEEECHH---HHT
T ss_pred -EeCCCccCCcHHHHHHHHHh---CCCCEEEEEcCCcCcCCHHHHHHHHHHHHhC----CCCCEEEEeecCCHH---Hhc
Confidence 43 2345677777664432 2444 89999998 5567899999998764 124444444333211 000
Q ss_pred ccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChhhHHHHh
Q 007143 182 RLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHF 261 (616)
Q Consensus 182 r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q~lr~df 261 (616)
.++ ..-+..+ ..++++.|.+++.+.... . ..+ ..+...|+|+++++++..+.. ..-. .-.
T Consensus 136 ~~~--~~~~~~~-~~g~~~~~~~~~~~~~r~-----~---~~~-----~~~~~~g~y~~~~~~l~~~~~-~~~~---~~~ 195 (245)
T 1h7e_A 136 EPS--TVKVVVN-TRQDALYFSRSPIPYPRN-----A---EKA-----RYLKHVGIYAYRRDVLQNYSQ-LPES---MPE 195 (245)
T ss_dssp CTT--SCEEEEC-TTCBEEEEESSCSSCCTT-----G---GGC-----CEEEEEEEEEEEHHHHHHGGG-SCCC---HHH
T ss_pred CCC--CcEEEEC-CCCcEEEeecCCCCCCcc-----c---ccC-----ceeEEEEEEEcCHHHHHHHHh-CCCC---ccc
Confidence 111 1112224 467888888764321110 0 000 134578999999998754331 1100 001
Q ss_pred hhhhhhcc---ccCceEEEEEccccchhhccChhhHHHHhhhh
Q 007143 262 VKGLLLDD---IMGYKIFTHEIHSSYAARIDNYRSYDIVSKDI 301 (616)
Q Consensus 262 v~~~l~~~---i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~di 301 (616)
+.+.+... ..|.+++++..+ ++|.+|+++++|..+...+
T Consensus 196 ~td~~~~~~~~~~g~~v~~~~~~-~~~~dIdtp~Dl~~a~~~l 237 (245)
T 1h7e_A 196 QAESLEQLRLMNAGINIRTFEVA-ATGPGVDTPACLEKVRALM 237 (245)
T ss_dssp HHHTCTTHHHHHTTCCEEEEECC-CCCCCSSSHHHHHHHHHHH
T ss_pred cchhhHHHHHHHCCCeEEEEEeC-CCCCCCCCHHHHHHHHHHH
Confidence 12222221 147899999987 8999999999999886654
No 33
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.68 E-value=1.8e-16 Score=158.65 Aligned_cols=168 Identities=21% Similarity=0.216 Sum_probs=122.5
Q ss_pred Hhhhhhhhc-c-ccCceEEEEEccccc----hhhccChhhHHHHhhhhhccccccccCCCcccCCCcceeeecceEEcCC
Q 007143 260 HFVKGLLLD-D-IMGYKIFTHEIHSSY----AARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRATKLERRGMYRALE 333 (616)
Q Consensus 260 dfv~~~l~~-~-i~g~~I~~~~~~~~y----~~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~~~~~~~i~~~~~ 333 (616)
.|+++.+.. + ....+++++... +| |.++++ |..+++.++..+.. ..+..+ .. .....+.+.+
T Consensus 24 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~w~di~~---~l~~n~~~l~~~~~-~~~~~~-~~------~~~~~~~~~~ 91 (240)
T 3r8y_A 24 VYIKGDLKEVTFPETVQAFVNKKS-GVLFGEWSEIKT---ILDENSKYIVDYVV-ENDRRN-SA------IPMLDLKGIK 91 (240)
T ss_dssp EEEEECGGGCCCCTTSEEEECSSE-EEEEEEHHHHHH---HHHHTTTTEEEEEE-EECCBS-BC------SCBCCCTTCS
T ss_pred EEEeccccccccCCcceEEEcCCC-eEEEccHHHHHH---HHHhccceechhhh-hhhhhh-hc------cchhhccCCC
Confidence 444544433 1 234567776654 45 888876 77788877743211 111110 00 0112234567
Q ss_pred cEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEEe-ceEECCCCEECCCcEEec---------eEECCC
Q 007143 334 IEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRH---------VIVCDG 402 (616)
Q Consensus 334 v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~---------siIg~~ 402 (616)
+.|++++.|++++.||++|.|++++.| .+++||++|.|+.+|.|. +++||++|.|+.++.+.+ ++|+++
T Consensus 92 ~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~ 171 (240)
T 3r8y_A 92 ARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDD 171 (240)
T ss_dssp SEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTT
T ss_pred CEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCC
Confidence 888888999999999999999999999 589999999999999996 899999999999999977 899999
Q ss_pred cEECCCCEECCCCEECCCcEECCCCEE----CCCCEEcccc
Q 007143 403 VIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSLLQ 439 (616)
Q Consensus 403 v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~~~ 439 (616)
|+||.+++|.++++||++|+|+++++| |+++++...|
T Consensus 172 ~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~~vp~~~v~~G~P 212 (240)
T 3r8y_A 172 VVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTP 212 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEEETT
T ss_pred CEECCCCEECCCcEECCCCEECCCCEECCCcCCCcEEEccC
Confidence 999999999888999999888888875 4566655443
No 34
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.67 E-value=5.9e-16 Score=149.47 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=106.4
Q ss_pred eeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe----ceEECCCCEECCCCEEe------ceEECCCCEECCC
Q 007143 322 KLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLIE------GSYIWDNVIIEDG 391 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I~------~s~I~~~v~Ig~~ 391 (616)
.+.....++++++.|++++.|.+++.||++|.|++++.|. +++||++|.|+++|.|. +++|+++|.|+.+
T Consensus 28 ~~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~ 107 (191)
T 3ixc_A 28 PYAGVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHS 107 (191)
T ss_dssp CBTTBCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTT
T ss_pred cccCCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCC
Confidence 3445677899999999999999999999999999999995 45899999999999997 8999999999999
Q ss_pred cEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 392 CELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 392 ~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
+.|.+++||++|+||.+++|.++++||++|+|+++++|.++..|...
T Consensus 108 ~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~~~ 154 (191)
T 3ixc_A 108 CILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSG 154 (191)
T ss_dssp CEECSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CEEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCcCcCCC
Confidence 99999999999999999999999999999999999998887777543
No 35
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.66 E-value=1.1e-15 Score=145.12 Aligned_cols=112 Identities=14% Similarity=0.175 Sum_probs=102.7
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEEec----eEECCCCEECCCCEEe-----ceEECCCCEECCCcEEec
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISD----SVIGEGCTIGSNVLIE-----GSYIWDNVIIEDGCELRH 396 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~----s~IG~~~~Ig~~~~I~-----~s~I~~~v~Ig~~~~I~~ 396 (616)
....+++++.|++++.|.+++.||++|.|+++++|.. ++||++|.|+++|.|. +++|++++.|+.++.|.+
T Consensus 11 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~ 90 (173)
T 1xhd_A 11 KKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHS 90 (173)
T ss_dssp BCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEES
T ss_pred CCCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeC
Confidence 4566899999999999999999999999999999964 8999999999999998 899999999999999999
Q ss_pred eEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 397 VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 397 siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
++||++|+||.++.|.++++||++++|+++++|.++..+..
T Consensus 91 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~ 131 (173)
T 1xhd_A 91 CHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPP 131 (173)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCCcEeCC
Confidence 99999999999999999999999999999998877766654
No 36
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.66 E-value=1.1e-15 Score=148.05 Aligned_cols=115 Identities=22% Similarity=0.240 Sum_probs=101.7
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe----ceEECCCCEECCCCEEe-----------------ceEE
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLIE-----------------GSYI 382 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I~-----------------~s~I 382 (616)
..+++.+++++.|++++.|++++.||++|.|+++++|. +++||++|.|+++|+|. .++|
T Consensus 9 ~~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~I 88 (194)
T 3tv0_A 9 TQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMII 88 (194)
T ss_dssp ---CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEE
T ss_pred cCCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEE
Confidence 34688999999999999999999999999999999994 57999999999999995 3689
Q ss_pred CCCCEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 383 WDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 383 ~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
++++.|+.++.+.++.||++++|+.+++|++|++||++|+||++++|.++++|...
T Consensus 89 g~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~ 144 (194)
T 3tv0_A 89 GTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPEN 144 (194)
T ss_dssp CSSCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTT
T ss_pred CCcceEecceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCCcEECCC
Confidence 99999999999999999999999999999999999999999999887777666543
No 37
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.66 E-value=1e-15 Score=147.03 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=105.7
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe----ceEECCCCEECCCCEE------------eceEECCCC
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLI------------EGSYIWDNV 386 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I------------~~s~I~~~v 386 (616)
+......+++++.|++.+.|.+++.||++|.|+++++|. +++||++|.|+++|.| .+++|+++|
T Consensus 11 ~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~ 90 (187)
T 3r3r_A 11 YKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDV 90 (187)
T ss_dssp BTTBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSC
T ss_pred hcccCcccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCC
Confidence 444566789999999999999999999999999999996 3599999999999999 689999999
Q ss_pred EECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 387 IIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 387 ~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
.|+.+|.|.+++||++|+||.+++|.++++||++|+||++++|.++..|...
T Consensus 91 ~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~ 142 (187)
T 3r3r_A 91 TVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESG 142 (187)
T ss_dssp EECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTT
T ss_pred EECCCCEEeCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcCcCCC
Confidence 9999999999999999999999999999999999999999998888777653
No 38
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.65 E-value=1.6e-16 Score=173.52 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=99.7
Q ss_pred eEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECC
Q 007143 328 MYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKA 407 (616)
Q Consensus 328 i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~ 407 (616)
..+++++.|++.+.|.+++.||++|.|++++.|++++||++|.|+++|+|.+++||++|.|+.++.|.+++||++|+||+
T Consensus 274 ~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~ 353 (496)
T 3c8v_A 274 AGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGF 353 (496)
T ss_dssp --CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECT
T ss_pred cccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECC
Confidence 44677888888999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEECCC----CEECCCcEECCCCEEC--CCCEEccc
Q 007143 408 GAVLKPG----VVLSFKVVIGERFVVP--AHSKVSLL 438 (616)
Q Consensus 408 ~~~I~~g----~vIg~~v~Ig~~~~v~--~~~~v~~~ 438 (616)
+|+|.++ ++||++|+||++++|. ++..|+..
T Consensus 354 ~a~I~~~~~~~v~IG~~a~IGagsvV~~~~~~~I~~~ 390 (496)
T 3c8v_A 354 NSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAG 390 (496)
T ss_dssp TCEEECCSSSCEEECTTCEECTTCEEECSSCEEECSS
T ss_pred CCEEeCCCCcceEECCCCEECCCCEEecCCCcEeCCC
Confidence 9999988 8999999999988877 66666543
No 39
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.65 E-value=2e-15 Score=143.41 Aligned_cols=112 Identities=20% Similarity=0.171 Sum_probs=102.6
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEEec----eEECCCCEECCCCEEe-----ceEECCCCEECCCcEEec
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISD----SVIGEGCTIGSNVLIE-----GSYIWDNVIIEDGCELRH 396 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~----s~IG~~~~Ig~~~~I~-----~s~I~~~v~Ig~~~~I~~ 396 (616)
....+++++.|++++.|.+++.||++|.|++++.|.. ++||++|.|+++|.|. +++|++++.|+.+|.|.+
T Consensus 9 ~~~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~ 88 (173)
T 1v3w_A 9 KKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHG 88 (173)
T ss_dssp BCCEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEES
T ss_pred CCCEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECC
Confidence 3456889999999999999999999999999999964 8999999999999997 599999999999999999
Q ss_pred eEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 397 VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 397 siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
++||++|+||.++.|.++++||++++||++++|.++..|+.
T Consensus 89 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~ 129 (173)
T 1v3w_A 89 AKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPD 129 (173)
T ss_dssp CEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECT
T ss_pred CEECCCCEECCCCEEeCCCEECCCCEECCCCEECCCcEeCC
Confidence 99999999999999999999999999999998887777754
No 40
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.64 E-value=1.2e-15 Score=148.85 Aligned_cols=105 Identities=22% Similarity=0.249 Sum_probs=89.0
Q ss_pred cceEEcCCcEECCCCEECC--CcEECCCCEECCCCEEe-ceEECCCCEECCCCEE----eceEECCCCEECCCcEE----
Q 007143 326 RGMYRALEIEQSRSAQVGS--FTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI----EGSYIWDNVIIEDGCEL---- 394 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~--~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I----~~s~I~~~v~Ig~~~~I---- 394 (616)
+...+++++.|++++.|.. ++.||++|.|+++|+|. +++||++|.|+++|.| ++++|+++|.|+.+|.|
T Consensus 31 ~~~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~ 110 (205)
T 3vbi_A 31 GFLSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAI 110 (205)
T ss_dssp CCSEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEE
T ss_pred CCeEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCC
Confidence 4566889999999999987 89999999999999996 8999999999999999 34999999999999999
Q ss_pred ----------------------eceEECCCcEECCCCEECCCCEECCCcEECCCCEEC
Q 007143 395 ----------------------RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVP 430 (616)
Q Consensus 395 ----------------------~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~ 430 (616)
.+++||++|+||.+++|.+|++||++|+||++++|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~ 168 (205)
T 3vbi_A 111 DDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVK 168 (205)
T ss_dssp CCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred CCcccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEEC
Confidence 457777777777777777777777777777777653
No 41
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.64 E-value=2.4e-15 Score=144.64 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=102.4
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe----ceEECCCCEECCCCEEece------------EECCCCEEC
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLIEGS------------YIWDNVIIE 389 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I~~s------------~I~~~v~Ig 389 (616)
....+++++.|++.+.|++++.||++|.|++++.|. +++||++|.|+++|.|..+ +|+++|.|+
T Consensus 18 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig 97 (189)
T 3r1w_A 18 ISPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIG 97 (189)
T ss_dssp BCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEEC
T ss_pred cCCEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEEC
Confidence 345689999999999999999999999999999995 3599999999999999764 999999999
Q ss_pred CCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 390 DGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 390 ~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
.+|.|.+++||++|+||.+++|.++++||++|+||++++|.++..|...
T Consensus 98 ~~~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~ 146 (189)
T 3r1w_A 98 HQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLESG 146 (189)
T ss_dssp TTCEEESCEECSSEEECTTCEECTTCEECSSCEECTTCEECTTCEECTT
T ss_pred CCCEEeCcEECCCcEECCCCEEcCCCEECCCCEEccCCEECCCCEeCCC
Confidence 9999999999999999999999999999999999999998887777543
No 42
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.60 E-value=1.6e-15 Score=158.25 Aligned_cols=142 Identities=14% Similarity=0.176 Sum_probs=101.7
Q ss_pred chhhccChhhHHHHhhhhhccccccccCCCcccCCCcceeeec-ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEec
Q 007143 284 YAARIDNYRSYDIVSKDIIQRWTYPYVPDVKFCGNRATKLERR-GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISD 362 (616)
Q Consensus 284 y~~~V~s~~sY~~a~~dil~r~~~p~~p~~~~~~~~~~~~~~~-~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~ 362 (616)
..+||.+|++|..++++.+.+|.+ |+.++... .-.+..+ .+.+++++.|.++++|++++.||++|+|+++|+|.+
T Consensus 25 ~l~ri~al~~f~~v~~g~lgg~i~---~e~nl~~~-~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~ 100 (334)
T 2pig_A 25 LLRQVIAVTDFNDVKAGTSGGWVD---ADNVLSQQ-GDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDR 100 (334)
T ss_dssp EEEEEEESSCBTTBCTTCEEEEES---STTSBCSS-SSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEES
T ss_pred EEEEEEEeeccccccCCccCCeEe---ccCCcccC-CceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEe
Confidence 457999999999999999999996 44444332 1234445 677788888888888888999999999999999999
Q ss_pred eEECCCCEECCCCEEeceEECCCCEECCC----------------------------cEEeceEECCCcEECCCCEECCC
Q 007143 363 SVIGEGCTIGSNVLIEGSYIWDNVIIEDG----------------------------CELRHVIVCDGVIMKAGAVLKPG 414 (616)
Q Consensus 363 s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~----------------------------~~I~~siIg~~v~Ig~~~~I~~g 414 (616)
|+||++|.|+++++|.++.|+.++.|+.+ ++|.+++|+.+|.|+.+|+|+ +
T Consensus 101 ~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~ 179 (334)
T 2pig_A 101 ADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-H 179 (334)
T ss_dssp CEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEE-S
T ss_pred EEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-C
Confidence 99999999999998887665555554444 444445555555555555555 5
Q ss_pred CEECCCcEECCCCEEC
Q 007143 415 VVLSFKVVIGERFVVP 430 (616)
Q Consensus 415 ~vIg~~v~Ig~~~~v~ 430 (616)
++|++++.|+++++|.
T Consensus 180 svI~~~a~I~~~a~V~ 195 (334)
T 2pig_A 180 AFIEHRAEVFDFALIE 195 (334)
T ss_dssp EEECTTCEECTTCEEE
T ss_pred cEEcCCCEECCCcEEC
Confidence 5555555555555543
No 43
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.60 E-value=1.2e-14 Score=140.20 Aligned_cols=116 Identities=21% Similarity=0.260 Sum_probs=89.8
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE-eceEECCCCEECCCcEE-------
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI-EGSYIWDNVIIEDGCEL------- 394 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I-~~s~I~~~v~Ig~~~~I------- 394 (616)
..+++++++++.|.+.+.|++++.||++|.|++++.|. +++||++|.|+.+|.| .+++|++++.|+.++.+
T Consensus 12 I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~ 91 (192)
T 3mqg_A 12 VDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPR 91 (192)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCB
T ss_pred ECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCc
Confidence 34566677777777777777778888888888888886 4888888888888888 47788888888888777
Q ss_pred ---------eceEECCCcEECCCCEECCCCEECCCcEECCCCEE----CCCCEEcccc
Q 007143 395 ---------RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSLLQ 439 (616)
Q Consensus 395 ---------~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~~~ 439 (616)
.+++||++|+||.+++|.+|++||++++|+++++| |+++++...|
T Consensus 92 ~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~v~~G~P 149 (192)
T 3mqg_A 92 AAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNKDVPDFALVVGVP 149 (192)
T ss_dssp TTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTT
T ss_pred cccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECcccCCCCEEEccC
Confidence 34788888999888888888888888888888874 4566665543
No 44
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.56 E-value=2.3e-14 Score=153.89 Aligned_cols=116 Identities=21% Similarity=0.200 Sum_probs=96.4
Q ss_pred eeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEec-----
Q 007143 322 KLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRH----- 396 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~----- 396 (616)
....+++++++++.|++++.|++++.||++|.|++++.|++++||++|.|++++.|.+++|+++|.||.++.|.+
T Consensus 257 ~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~ 336 (401)
T 2ggo_A 257 TYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDE 336 (401)
T ss_dssp CEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTC
T ss_pred CEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCC
Confidence 345678999999999999999999999999999999999999999999999999999999999999999999962
Q ss_pred ----eEECC----------CcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 397 ----VIVCD----------GVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 397 ----siIg~----------~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
+.+++ +++||++|+|+.+++|.++++||++++|+++++|+.
T Consensus 337 ~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~ 391 (401)
T 2ggo_A 337 KEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNR 391 (401)
T ss_dssp SCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCCCeEcc
Confidence 23332 566666666666666667777777777777777764
No 45
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.56 E-value=4.3e-14 Score=138.66 Aligned_cols=102 Identities=18% Similarity=0.121 Sum_probs=71.7
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-----ceEECCCCEECCCCEEec---------------eEECCCC
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIEG---------------SYIWDNV 386 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~~---------------s~I~~~v 386 (616)
...+++++.|++++.|++++.||++|.|++++.|. +++||++|.|+++|.|.. ++|+++|
T Consensus 39 ~~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v 118 (213)
T 3kwd_A 39 EPEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNV 118 (213)
T ss_dssp CCEECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTC
T ss_pred CCcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCc
Confidence 34566777777777777777777777777777773 367777777777777763 6777777
Q ss_pred EECCCcEEec-eEECCCcEECCCCEECCCCEECCCcEECCCCEE
Q 007143 387 IIEDGCELRH-VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 387 ~Ig~~~~I~~-siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v 429 (616)
.|+.+|.|.+ ++||++|+||++++|. +++||++|+||++++|
T Consensus 119 ~Ig~~~~I~~~v~Ig~~v~IG~~a~I~-~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 119 SITHMALIHGPAYIGDGCFIGFRSTVF-NARVGAGCVVMMHVLI 161 (213)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEE
T ss_pred EECCCcEEcCCCEECCCCEECCCCEEe-CcEECCCCEEcCCCEE
Confidence 7777777765 7777777777777765 3556666666665555
No 46
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.55 E-value=6.8e-14 Score=142.09 Aligned_cols=116 Identities=23% Similarity=0.221 Sum_probs=70.2
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEE--------------eceEECCCCEECCCCEEec--------eE
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI--------------SDSVIGEGCTIGSNVLIEG--------SY 381 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I--------------~~s~IG~~~~Ig~~~~I~~--------s~ 381 (616)
..+++.+++++.|++++.|.+++.||++|.|++++.| .+++||++|.|+++|+|.. ++
T Consensus 31 I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~ 110 (266)
T 3r0s_A 31 VSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTR 110 (266)
T ss_dssp ECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEE
T ss_pred ECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEE
Confidence 3345555555555555555556666666666666666 3556666666666666642 56
Q ss_pred ECCCCEECCCcEE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 382 IWDNVIIEDGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 382 I~~~v~Ig~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
||+++.|+.++.| .++.||++++|+.++.|..+++||++|.||.+++|.++++|+...
T Consensus 111 IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~a 169 (266)
T 3r0s_A 111 IGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGC 169 (266)
T ss_dssp ECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred ECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEECCCC
Confidence 6666666666666 456666666666666666666666666666666655555555443
No 47
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.55 E-value=5e-14 Score=144.40 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=38.6
Q ss_pred eEECCCCEECCCCEEec--------eEECCCCEECCCcEE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCC
Q 007143 363 SVIGEGCTIGSNVLIEG--------SYIWDNVIIEDGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHS 433 (616)
Q Consensus 363 s~IG~~~~Ig~~~~I~~--------s~I~~~v~Ig~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~ 433 (616)
++||++|.|+++|+|.. ++|++++.|+.++.| .+++||++++|+.++.|..+++||++|.||.+++|.+++
T Consensus 101 v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v 180 (283)
T 4eqy_A 101 LVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYV 180 (283)
T ss_dssp EEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCe
Confidence 44444444444444432 445555555555544 345555555555555555555555555555555555555
Q ss_pred EEcccc
Q 007143 434 KVSLLQ 439 (616)
Q Consensus 434 ~v~~~~ 439 (616)
+|+...
T Consensus 181 ~Ig~~~ 186 (283)
T 4eqy_A 181 RIGAHS 186 (283)
T ss_dssp EECTTC
T ss_pred EECCCc
Confidence 444433
No 48
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.54 E-value=8.3e-14 Score=134.27 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=62.8
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEec-eEEC---
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRH-VIVC--- 400 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~-siIg--- 400 (616)
..++++++.|++++.|+++++|+.++.||+++.|+ +++|+.+|.||++|.|. ++.|+++++|+++|.|.. +++.
T Consensus 9 ~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~ 88 (192)
T 3mqg_A 9 TAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVY 88 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCS
T ss_pred CcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEeccc
Confidence 34444444444444444444444444444444442 44444444444444442 344444444444444432 1221
Q ss_pred ------------CCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 401 ------------DGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 401 ------------~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
..++||++++|+.+++|..+++||++++|+++++|..
T Consensus 89 ~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~ 137 (192)
T 3mqg_A 89 NPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNK 137 (192)
T ss_dssp SCBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECc
Confidence 2357778888888888888888888888888888874
No 49
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.54 E-value=1.2e-13 Score=140.20 Aligned_cols=117 Identities=16% Similarity=0.218 Sum_probs=95.3
Q ss_pred eeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE--------------eceEECCCC
Q 007143 322 KLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI--------------EGSYIWDNV 386 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I--------------~~s~I~~~v 386 (616)
.+..+++.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|++++.| .++.|++++
T Consensus 11 a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~ 90 (266)
T 3r0s_A 11 AVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNA 90 (266)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTC
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCC
Confidence 3455677788888888999998999999999999999996 8999999999999999 589999999
Q ss_pred EECCCcEEec--------eEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 387 IIEDGCELRH--------VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 387 ~Ig~~~~I~~--------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
.|+++|+|.. +.||+++.|+.++.|..+|+||++|.|+.++.+..++.|+..
T Consensus 91 ~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~ 150 (266)
T 3r0s_A 91 TIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDF 150 (266)
T ss_dssp EECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTT
T ss_pred EECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCC
Confidence 9999999964 888888888888777777777776666665555544444443
No 50
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.54 E-value=1e-13 Score=140.75 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=68.8
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEE-------------eceEECCCCEECCCCEEe--------ceE
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-------------SDSVIGEGCTIGSNVLIE--------GSY 381 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-------------~~s~IG~~~~Ig~~~~I~--------~s~ 381 (616)
...+++.+++++.|++.+.|.+++.||++|.|++++.| .+++||++|.|+++|+|. +++
T Consensus 33 ~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~ 112 (265)
T 4e6u_A 33 IIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTK 112 (265)
T ss_dssp EECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEE
T ss_pred EECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceE
Confidence 33445555555555555555555666666666666666 245666666666666664 356
Q ss_pred ECCCCEECCCcEE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 382 IWDNVIIEDGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 382 I~~~v~Ig~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
|++++.|+.++.| .+++||++++|+.++.|..+++||++|.||.+++|.++++|+...
T Consensus 113 IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~ 171 (265)
T 4e6u_A 113 IGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYS 171 (265)
T ss_dssp ECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTC
T ss_pred EccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCC
Confidence 6666666666666 456666666666666666556666666666666655555555443
No 51
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.54 E-value=9.1e-14 Score=142.46 Aligned_cols=118 Identities=23% Similarity=0.215 Sum_probs=96.9
Q ss_pred eeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE-------------eceEECCCCE
Q 007143 322 KLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI-------------EGSYIWDNVI 387 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I-------------~~s~I~~~v~ 387 (616)
....+++.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|+++|.| .+++|++++.
T Consensus 29 a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~ 108 (283)
T 4eqy_A 29 AIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNT 108 (283)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcc
Confidence 4455677888888888899998999999999999999996 7999999999999999 3789999999
Q ss_pred ECCCcEEec--------eEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 388 IEDGCELRH--------VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 388 Ig~~~~I~~--------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
|+++|+|.. ++||+++.|+.++.|..+|+||++|.|+.++.+..+++|+...
T Consensus 109 Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~ 168 (283)
T 4eqy_A 109 IREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWA 168 (283)
T ss_dssp ECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTC
T ss_pred cCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCe
Confidence 999999975 8888888888888877777777777666666655555555443
No 52
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.54 E-value=1.1e-13 Score=140.81 Aligned_cols=99 Identities=13% Similarity=0.184 Sum_probs=63.2
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE-------------eceEECCCCEEC
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI-------------EGSYIWDNVIIE 389 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I-------------~~s~I~~~v~Ig 389 (616)
..+.+.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|+++|+| .+++|++++.|+
T Consensus 10 I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~ 89 (270)
T 1j2z_A 10 ISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIR 89 (270)
T ss_dssp ECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEEC
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEEC
Confidence 34556677777777777777777777777777777775 7777777777777777 356666666666
Q ss_pred CCcEEe--------ceEECCCcEECCCCEECCCCEECCCcE
Q 007143 390 DGCELR--------HVIVCDGVIMKAGAVLKPGVVLSFKVV 422 (616)
Q Consensus 390 ~~~~I~--------~siIg~~v~Ig~~~~I~~g~vIg~~v~ 422 (616)
++|+|. .+.||+++.|+.+++|..+|+||++|+
T Consensus 90 ~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~ 130 (270)
T 1j2z_A 90 EFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCI 130 (270)
T ss_dssp TTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCE
T ss_pred CCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcE
Confidence 666664 245555555444444444344433333
No 53
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.53 E-value=1e-14 Score=145.05 Aligned_cols=203 Identities=13% Similarity=0.105 Sum_probs=127.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
.|.|||||+|. +||.+.+...||+|+|++|+|||+|+++.|..+|+ +|+|++.. +++++++ + +.+
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~---------~--~~~ 66 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP---------A--LTL 66 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC---------S--EEE
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc---------C--eEe
Confidence 47999999999 88777665689999999999999999999999998 88887543 3333222 2 333
Q ss_pred EeCCCccCHHHHHHHHHhcccccCCEEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCC
Q 007143 108 IESHNIISAGDALRLIYEQNVIHGDFVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGT 185 (616)
Q Consensus 108 i~~~~~~~~gdalr~~~~~~~i~~dfLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~ 185 (616)
....|++++++... ..+.+.||+++||+ +....+..+++ | .. ++.+++...+... ...+++.
T Consensus 67 ---~~~~g~~~~i~~a~--~~~~~~~lv~~~D~P~~~~~~i~~l~~-~-~~-----~~~~~~~~~~~~~----~~~~~~~ 130 (232)
T 2dpw_A 67 ---PDRGGLLENLEQAL--EHVEGRVLVATGDIPHLTEEAVRFVLD-K-AP-----EAALVYPIVPKEA----VEARFPR 130 (232)
T ss_dssp ---CCCSSHHHHHHHHH--HTCCSEEEEEETTCTTCCHHHHHHHHH-H-CC-----SCSEEEEEEEHHH----HHHHCTT
T ss_pred ---cCCCCHHHHHHHHH--HHcCCCEEEEeCCcccCCHHHHHHHHh-c-CC-----CCCEEEEEeeccc----hhhhCCC
Confidence 45678999888643 33444599999999 67778999998 6 22 2445554433110 0012221
Q ss_pred CceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChh-h-------H
Q 007143 186 DELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQ-H-------L 257 (616)
Q Consensus 186 ~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q-~-------l 257 (616)
+ ..++..+.++|. ..+|+|++++.++..+.+...-. . +
T Consensus 131 ----~-----~~~v~~~~ek~~-------------------------~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~ 176 (232)
T 2dpw_A 131 ----T-----KRTYARLREGTF-------------------------TGGNLLLLDKSLFRKALPLARRVVALRKRPLAL 176 (232)
T ss_dssp ----C-----CCCCEEETTEEE-------------------------EECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHH
T ss_pred ----c-----ceeEEEEecCce-------------------------eeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHH
Confidence 0 124555655431 34678888888776543211000 0 0
Q ss_pred --------------HHHhhhhhhhcc--ccCceEEEEEcc-ccchhhccChhhHH
Q 007143 258 --------------RRHFVKGLLLDD--IMGYKIFTHEIH-SSYAARIDNYRSYD 295 (616)
Q Consensus 258 --------------r~dfv~~~l~~~--i~g~~I~~~~~~-~~y~~~V~s~~sY~ 295 (616)
.+-.+..+++.. ..|.++.++..+ ++.|.+|+++++|.
T Consensus 177 ~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 177 ARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 001112222221 146788888875 35899999999873
No 54
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.53 E-value=8.3e-14 Score=139.90 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=85.2
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-----ceEECCCCEECCCCEEe-----------------------
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIE----------------------- 378 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~----------------------- 378 (616)
...+++++.|++++.|.+++.||++|.|++++.|. +++||++|.|+++|+|.
T Consensus 59 ~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~ 138 (247)
T 1qre_A 59 APVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKE 138 (247)
T ss_dssp CCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEE
T ss_pred CcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCcc
Confidence 44577888888888888888899999999998885 23899999999999986
Q ss_pred -ceEECCCCEECCCcEEec-eEECCCcEECCCCEECCCCEECCCcEECCCCEE
Q 007143 379 -GSYIWDNVIIEDGCELRH-VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 379 -~s~I~~~v~Ig~~~~I~~-siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v 429 (616)
+++||++|.|+.+|.|.+ ++||++|+||.+++|.. ++||++|+||++++|
T Consensus 139 ~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 139 YAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAA 190 (247)
T ss_dssp ESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEE
T ss_pred CceEECCCCEECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEE
Confidence 278999999999999987 88999999999988876 778888888877777
No 55
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.53 E-value=1.9e-13 Score=138.17 Aligned_cols=51 Identities=22% Similarity=0.133 Sum_probs=24.0
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI 377 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I 377 (616)
.+.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|++++.|
T Consensus 12 ~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 63 (259)
T 3hsq_A 12 KAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVI 63 (259)
T ss_dssp TCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEE
Confidence 33344444444444444444444444444444443 3444555554444444
No 56
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.53 E-value=4.6e-13 Score=131.54 Aligned_cols=208 Identities=12% Similarity=0.118 Sum_probs=130.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcH-HHHHHHHHhcCCCCCCCcEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHS-KQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~-~~i~~~l~~~~~~~~~~~~i 105 (616)
++.|||||+|.|+||+ ...||+|+|++|+|||+|+++.|..++ +++|+|++++.. +.+.+++.. ..+
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~--------~~v 70 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG--------EDS 70 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCB--------TTE
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhcc--------CCe
Confidence 4789999999999998 357999999999999999999999998 999999998765 446665531 234
Q ss_pred EEEeCCCccCHHHHHHHHHhcccc-cCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCccc
Q 007143 106 KTIESHNIISAGDALRLIYEQNVI-HGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQS 181 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i-~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~ 181 (616)
.++.. ..+.+++++... ..+ ..+ ++++.||+ +....+..+++.|. +. ..+++.+.+.. +.
T Consensus 71 ~~~~~--~~~~~~~i~~al--~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~-----~~~~i~~~~~~-----d~- 134 (223)
T 2xwl_A 71 VIVSG--GVDRTESVALAL--EAAGDAEFVLVHDAARALTPPALIARVVAALK-EG-----HSAVVPGLAPA-----DT- 134 (223)
T ss_dssp EEEEC--CSSHHHHHHHHH--TTCTTCSEEEECCTTCTTCCHHHHHHHHHHHH-HT-----CSEEEEEECCS-----SC-
T ss_pred EEEcC--CCCHHHHHHHHH--HhcCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hc-----CCeEEEEEecc-----cc-
Confidence 45543 234566666433 334 445 78889998 45568999999883 11 22344333321 11
Q ss_pred ccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhh-hhcC--CChhhHH
Q 007143 182 RLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSL-FTDN--FDYQHLR 258 (616)
Q Consensus 182 r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~l-f~dn--fd~q~lr 258 (616)
+..+| .++++..+.+++. .+ . -...+++.+..+.. +..+ +.+...+
T Consensus 135 -------~~~~~-~~g~~~~~~e~~~----l~----------------~---~~~p~~f~~~~l~~~~~~~~~~~~~~~~ 183 (223)
T 2xwl_A 135 -------IKAVD-ANGAVLGTPERAG----LR----------------A---VQTPQGFHADVLRRAYARATAGGVTDDA 183 (223)
T ss_dssp -------EEEEC-TTSBEEECCCGGG----EE----------------E---ECSCEEEEHHHHHHHHTTCCSCCCCCHH
T ss_pred -------eEEEc-CCCcEEeecChHH----he----------------e---eeCCcccCHHHHHHHHHHhhCCCCccHH
Confidence 11234 3577777766532 00 0 01234555554432 2222 1111111
Q ss_pred HHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhh
Q 007143 259 RHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDI 301 (616)
Q Consensus 259 ~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~di 301 (616)
. ++.. .+.++..+..+ ++|.+|+++++|..+...+
T Consensus 184 -~----~~~~--~~~~v~~~~~~-~~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 184 -S----LVEQ--LGTPVQIVDGD-PLAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp -H----HHHT--TTCCCEEEECC-GGGCCCCSHHHHHHHHHHH
T ss_pred -H----HHHH--cCCCEEEEECC-cccccccCHHHHHHHHHHH
Confidence 1 1111 35678887775 7899999999998886543
No 57
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.52 E-value=1.7e-13 Score=138.62 Aligned_cols=119 Identities=16% Similarity=0.099 Sum_probs=93.0
Q ss_pred ceeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEE--------------eceEECCCCEECCCCEEe-------c
Q 007143 321 TKLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI--------------SDSVIGEGCTIGSNVLIE-------G 379 (616)
Q Consensus 321 ~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I--------------~~s~IG~~~~Ig~~~~I~-------~ 379 (616)
+....+++.+++++.|++++.|.+++.||++|.|++++.| .+++||++|.|+++|+|. .
T Consensus 24 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~ 103 (259)
T 3hsq_A 24 YSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSP 103 (259)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBC
T ss_pred CCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCc
Confidence 4455667888888888888999888999999999999999 378999999999999998 7
Q ss_pred eEECCCCEECCCcEEe-ceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 380 SYIWDNVIIEDGCELR-HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 380 s~I~~~v~Ig~~~~I~-~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
++|++++.|+.+++|. ++.||++++|+.++.+..+++||++|.||.+++|.++++|+...
T Consensus 104 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~ 164 (259)
T 3hsq_A 104 TVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYS 164 (259)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTC
T ss_pred EEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCC
Confidence 8888888888888884 57777777777776666666666666666666655555555443
No 58
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.7e-13 Score=146.15 Aligned_cols=193 Identities=10% Similarity=0.098 Sum_probs=133.3
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeC-CeehHHHHHHHHHHC----CCc-EEEEEcC-CcHHHHHHHHHhcCCC
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLV-NVPMINYTLAWLEAA----GVA-EVFVFCC-AHSKQVIDYLENSEWF 98 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~-g~PlI~y~Le~L~~~----Gv~-eI~vv~~-~~~~~i~~~l~~~~~~ 98 (616)
..++.+||||||.||||+. ..||+|+||+ |+|||+|+++.+... |+. .++|+++ +..+++++|+++..+.
T Consensus 90 ~~k~avViLAGG~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~f 166 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSAN 166 (488)
T ss_dssp GGGEEEEEECCCBSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCSS
T ss_pred cCCceEEEEcCCCcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhcccc
Confidence 4567889999999999984 7899999999 999999999999887 533 3677777 6689999999874332
Q ss_pred CCCCcEEEEEeCC------------------------CccCHHHHHHHHHhc---ccc----cCCEEEEeCceecc-hhH
Q 007143 99 SQPNFTVKTIESH------------------------NIISAGDALRLIYEQ---NVI----HGDFVLISGDTVSN-MLL 146 (616)
Q Consensus 99 ~~~~~~i~~i~~~------------------------~~~~~gdalr~~~~~---~~i----~~dfLlv~gD~i~~-~~l 146 (616)
+++|.++.+. .+.|+|++++.+.+. ..+ .+.++|++||.+.. .++
T Consensus 167 ---g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~ 243 (488)
T 2i5k_A 167 ---RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDL 243 (488)
T ss_dssp ---SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCH
T ss_pred ---CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccH
Confidence 4577777555 567999999866431 222 23499999999776 477
Q ss_pred HHHHHHHHHhhccCCCceEEEEEecCCCCCCCccc-ccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCc
Q 007143 147 TQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQS-RLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPS 225 (616)
Q Consensus 147 ~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~-r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~ 225 (616)
. ++..|..+ ++.+||.+.+.. .+. ++| ++..+...-+++.|.+.|... ...|....
T Consensus 244 ~-~L~~~~~~-----~a~~t~~v~~~~-----~p~~~yG----~Iv~~dG~~~iVE~~e~~~e~-------~~~~~~~~- 300 (488)
T 2i5k_A 244 K-ILNHMIET-----GAEYIMELTDKT-----RADVKGG----TLISYDGQVRLLEVAQVPKEH-------IDEFKNIR- 300 (488)
T ss_dssp H-HHHHHHHS-----CCSEEEEEEECC-----GGGSSSC----EEEEETTEEEEECGGGSCTTS-------HHHHTCTT-
T ss_pred H-HHHHHHhc-----CCcEEEEEEEec-----CCCCcee----EEEEECCcEEEEEeccCCHHH-------Hhhccccc-
Confidence 5 66888764 477777766543 222 466 454442224566666665421 11122211
Q ss_pred eEEEeccccceeEeeCHhHHhhhhc
Q 007143 226 ISLHNDKQDCYIDICSPEVLSLFTD 250 (616)
Q Consensus 226 ~~ir~dl~d~gIyIcsp~vl~lf~d 250 (616)
....+++++|+++.+.+..+.+
T Consensus 301 ---~~~~~Ntgi~~f~~~~L~~~l~ 322 (488)
T 2i5k_A 301 ---KFTNFNTNNLWINLKAVKRLIE 322 (488)
T ss_dssp ---TCCEEEEEEEEEEHHHHHHHHH
T ss_pred ---ccCEEEEEEEEEeHHHHHHHHh
Confidence 2345689999999998876544
No 59
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.52 E-value=2.1e-13 Score=138.41 Aligned_cols=118 Identities=15% Similarity=0.170 Sum_probs=96.3
Q ss_pred eeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE-------------eceEECCCCE
Q 007143 322 KLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI-------------EGSYIWDNVI 387 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I-------------~~s~I~~~v~ 387 (616)
....+++.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|++++.| .+++|++++.
T Consensus 14 a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~ 93 (265)
T 4e6u_A 14 AIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNL 93 (265)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCE
T ss_pred CEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeE
Confidence 4455677888899999999999999999999999999996 7999999999999999 4789999999
Q ss_pred ECCCcEEe--------ceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 388 IEDGCELR--------HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 388 Ig~~~~I~--------~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
|+++|+|. .++||+++.|+.++.|..+|+||++|.|+.++.+..+++|+...
T Consensus 94 Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~ 153 (265)
T 4e6u_A 94 IREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHV 153 (265)
T ss_dssp ECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSC
T ss_pred ECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCe
Confidence 99999997 48888888888887777777777766666665555555554433
No 60
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.52 E-value=1.5e-13 Score=135.97 Aligned_cols=209 Identities=11% Similarity=0.026 Sum_probs=130.3
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSKQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i 105 (616)
+++.|||||+|.|+||+ ||+|+|++|+|||+|+++.+..++ +++|+|++++ +.+.+++... ++.+
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~~------~~~~ 68 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKNF------GVEV 68 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHHT------TCEE
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHHc------CCEE
Confidence 34679999999999998 899999999999999999999998 7999999864 5677776541 2344
Q ss_pred EEEeCC-----CccCHHHHHHHHHhccccc--CC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCC
Q 007143 106 KTIESH-----NIISAGDALRLIYEQNVIH--GD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPS 175 (616)
Q Consensus 106 ~~i~~~-----~~~~~gdalr~~~~~~~i~--~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~ 175 (616)
+..+ ...|.+++++.... .+. .+ ||++.||+ +....+..+++.|++. ++.+++.+.+....
T Consensus 69 --~~~~~~~~~~~~g~~~sv~~~l~--~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~ 139 (228)
T 1ezi_A 69 --VLRPAELASDTASSISGVIHALE--TIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEK-----IKGSVVSACPMEHH 139 (228)
T ss_dssp --EECCC------CHHHHHHHHHHH--HHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTT-----TCCCEEEEEECSSC
T ss_pred --EeCchHHcCCCCChHHHHHHHHH--HhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-----CCCEEEEEEecCCC
Confidence 3222 23456677765432 232 24 99999998 5567899999877643 23334444433210
Q ss_pred CCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChh
Q 007143 176 PITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQ 255 (616)
Q Consensus 176 ~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q 255 (616)
+ ++ ...++ ..+++..+.+... ..+... ..+.. .....|+|++.+..+....
T Consensus 140 ----p--~~----~~~~~-~~g~~~~~~~~~~-----~~~~~~---~~~~~----~~~~~giy~~~~~~l~~~~------ 190 (228)
T 1ezi_A 140 ----P--LK----TLLQI-NNGEYAPMRHLSD-----LEQPRQ---QLPQA----FRPNGAIYINDTASLIANN------ 190 (228)
T ss_dssp ----T--TS----CEEEC-C--CEEESSCHHH-----HTCCGG---GSCCE----EEEEEEEEEEEHHHHHHHT------
T ss_pred ----c--ce----eeEEc-CCCcEeecccccc-----ccCCcc---cCchh----heeeeEEEEEeHHHHhhCC------
Confidence 1 11 12234 3567777755210 000000 00110 1223689998876553210
Q ss_pred hHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhh
Q 007143 256 HLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKD 300 (616)
Q Consensus 256 ~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~d 300 (616)
...+.++..+..++.+|.+|+++++|..+...
T Consensus 191 -------------~~~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~ 222 (228)
T 1ezi_A 191 -------------CFFIAPTKLYIMSHQDSIDIDTELDLQQAENI 222 (228)
T ss_dssp -------------SSCCSSCEEEECCTGGGCCCCSHHHHHHHHHH
T ss_pred -------------cccCCceEEEEeCcccccCCCCHHHHHHHHHH
Confidence 11367778888765699999999999887553
No 61
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.51 E-value=1.8e-13 Score=135.58 Aligned_cols=214 Identities=13% Similarity=0.138 Sum_probs=121.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHC-CCcEEEEEcCCcH-HHHHHHHHhcCCCCCCCcEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAA-GVAEVFVFCCAHS-KQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~-Gv~eI~vv~~~~~-~~i~~~l~~~~~~~~~~~~i~ 106 (616)
|.|||||+|.|+||++ ..+||+|+|++|+|||+|+++.|..+ ++++|+|++++.. +.+++++.. |...-...+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK--YLPLYKERII 78 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH--HCGGGGGGEE
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh--ccccccCceE
Confidence 7899999999999998 67899999999999999999999998 5999999999876 778777754 2100001223
Q ss_pred EEeCCCccCHHHHHHHHHhcccc-------cCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCC
Q 007143 107 TIESHNIISAGDALRLIYEQNVI-------HGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSP 176 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i-------~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~ 176 (616)
+.. ...|..++++.... .+ ..+ +|++.||+ +...++..+++.|++.. +. ++++ +..
T Consensus 79 ~~~--~~~~~~~~i~~~l~--~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~-----~~-~~~~-~~~--- 144 (236)
T 2vsh_A 79 ITK--GGADRNTSIKNIIE--AIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD-----AV-DTVV-EAV--- 144 (236)
T ss_dssp EEE--CCSSHHHHHHHHHH--HHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS-----EE-EEEE-ECC---
T ss_pred EEC--CCCchHHHHHHHHH--HHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC-----cE-EEEE-ecc---
Confidence 332 12355555554321 12 225 77888999 56679999999998642 32 2222 221
Q ss_pred CCcccccCCCceEEEEeCCCC-eEEEeeecCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHh-hhhcCCCh
Q 007143 177 ITHQSRLGTDELFMAIDPNTK-QLLYYEDKADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLS-LFTDNFDY 254 (616)
Q Consensus 177 ~~~~~r~~~~~~vv~id~~~~-rvl~~~e~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~-lf~dnfd~ 254 (616)
.. +..+ ..+ ++..+.+++. + .. -...++++++.+. ++....+.
T Consensus 145 --~~---------~~~~-~~g~~~~~~~~~~~------------------~--~~---~~~p~~f~~~~l~~~~~~~~~~ 189 (236)
T 2vsh_A 145 --DT---------IVES-TNGQFITDIPNRAH------------------L--YQ---GQTPQTFRCKDFMDLYGSLSDE 189 (236)
T ss_dssp --SC---------EEEC-SSSSBCCBCCCGGG------------------E--EE---EEEEEEEEHHHHHHHHHTCCHH
T ss_pred --cc---------EEEe-CCCCeeeeecChHH------------------h--ee---ecCCcEecHHHHHHHHHHHHhc
Confidence 11 1112 245 5555544321 0 00 0125667777554 44433211
Q ss_pred hhHHHHhhh--hhhhccccCceEEEEEccccchhhccChhhHHHHhhh
Q 007143 255 QHLRRHFVK--GLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKD 300 (616)
Q Consensus 255 q~lr~dfv~--~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~d 300 (616)
. ..++.. .++. ..+.+++.+..+ ++|.+|+++++|..+...
T Consensus 190 -g-~~~~~~~~~~l~--~~~~~v~~~~~~-~~~~dIdtpeDl~~a~~~ 232 (236)
T 2vsh_A 190 -E-KEILTDACKIFV--IKGKDVALAKGE-YSNLKITTVTDLKIAKSM 232 (236)
T ss_dssp -H-HHHCCSHHHHHH--HTTCCEEEEECC-TTCCCCCSHHHHHHHHHH
T ss_pred -C-CCcCCCHHHHHH--HcCCCEEEEECC-ccccCcCCHHHHHHHHHH
Confidence 0 001111 1222 246688888864 799999999999887654
No 62
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.51 E-value=2.3e-13 Score=133.48 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=88.7
Q ss_pred eeeecceEEcCCcEECCCCEECC----CcEECCCCEECCCCEEec---------------eEECCCCEECCCCEEec-eE
Q 007143 322 KLERRGMYRALEIEQSRSAQVGS----FTVIGYGTKIGSNSKISD---------------SVIGEGCTIGSNVLIEG-SY 381 (616)
Q Consensus 322 ~~~~~~i~~~~~v~i~~~~~I~~----~~~Ig~~~~Ig~~~~I~~---------------s~IG~~~~Ig~~~~I~~-s~ 381 (616)
....+++++++++.|++++.|.. ++.||++|.|++++.|.. ++||++|.|+.+|.|.+ ++
T Consensus 52 a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~ 131 (213)
T 3kwd_A 52 SNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAY 131 (213)
T ss_dssp SEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEE
T ss_pred CEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCE
Confidence 44567889999999999999854 589999999999999963 89999999999999986 99
Q ss_pred ECCCCEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEc
Q 007143 382 IWDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVS 436 (616)
Q Consensus 382 I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~ 436 (616)
|+++|.||.++.|.+++||++|+||++++|. + ++|+++..|++++++.
T Consensus 132 Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~-~------~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 132 IGDGCFIGFRSTVFNARVGAGCVVMMHVLIQ-D------VEIPPGKYVPSGMVIT 179 (213)
T ss_dssp ECTTCEECTTCEEEEEEECTTCEECSSCEEE-S------CEECTTBEECTTCEEC
T ss_pred ECCCCEECCCCEEeCcEECCCCEEcCCCEEC-C------cEeCCCCEECCCcEEc
Confidence 9999999999999888888888888777773 4 5555555555555555
No 63
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.50 E-value=3.3e-13 Score=136.59 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=63.4
Q ss_pred ecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-------------ceEECCCCEECC
Q 007143 325 RRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-------------GSYIWDNVIIED 390 (616)
Q Consensus 325 ~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-------------~s~I~~~v~Ig~ 390 (616)
.+++.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|+++|+|. +++|++++.|++
T Consensus 15 ~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~ 94 (262)
T 2qia_A 15 EEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRE 94 (262)
T ss_dssp CTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECT
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCC
Confidence 3455566666666666666666666666666666664 66677777777777774 466666666666
Q ss_pred CcEEec--------eEECCCcEECCCCEECCCCEECCCcEECCCCE
Q 007143 391 GCELRH--------VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFV 428 (616)
Q Consensus 391 ~~~I~~--------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~ 428 (616)
+|.|.. ++||++++|+.++.|..+|+||+++.|++++.
T Consensus 95 ~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~ 140 (262)
T 2qia_A 95 SVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNAT 140 (262)
T ss_dssp TCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCE
T ss_pred CCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCccc
Confidence 666642 56666666555555544444444444444333
No 64
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.50 E-value=3.7e-13 Score=136.91 Aligned_cols=116 Identities=17% Similarity=0.167 Sum_probs=94.8
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEec---------------eEECCCCEECCCCEE-eceEECCCC
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISD---------------SVIGEGCTIGSNVLI-EGSYIWDNV 386 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~---------------s~IG~~~~Ig~~~~I-~~s~I~~~v 386 (616)
...+++.+++++.|+++|.|++++.||++|.|++++.|+. ++||++|.|+++++| .+++|++++
T Consensus 16 ~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~ 95 (273)
T 3fs8_A 16 IIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIGDNF 95 (273)
T ss_dssp EECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCEECTTC
T ss_pred EECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCEECCCC
Confidence 3445777888888888888888888888888888888863 889999999999999 488999999
Q ss_pred EECCCcEEe-ceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 387 IIEDGCELR-HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 387 ~Ig~~~~I~-~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
.|+.++.|. ++.|++++.|+.++.|..+++||++|.|++++.|+.++.+...
T Consensus 96 ~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~ 148 (273)
T 3fs8_A 96 QTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDF 148 (273)
T ss_dssp EECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECTT
T ss_pred EECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCceeCCc
Confidence 999999995 8888888888888888777777777777777777777666643
No 65
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.49 E-value=4.7e-13 Score=135.51 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=95.3
Q ss_pred ceeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-------------ceEECCCCEECCCCEEec--------
Q 007143 321 TKLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-------------DSVIGEGCTIGSNVLIEG-------- 379 (616)
Q Consensus 321 ~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-------------~s~IG~~~~Ig~~~~I~~-------- 379 (616)
+....+++++++++.|++++.|++++.||++|.|+++++|. +++||++|.|+++|+|..
T Consensus 29 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~ 108 (262)
T 2qia_A 29 FCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGL 108 (262)
T ss_dssp TCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSE
T ss_pred CCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCc
Confidence 34455678888888888888888889999999999999995 688999999999999963
Q ss_pred eEECCCCEECCCcEE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 380 SYIWDNVIIEDGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 380 s~I~~~v~Ig~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
++|++++.|+.++.| .++.||++++|+.++.+..+++||++|.||.+++|.++++|+...
T Consensus 109 ~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~ 169 (262)
T 2qia_A 109 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHV 169 (262)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCC
Confidence 899999999999988 578888888777777777667777777666666666666655444
No 66
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.49 E-value=3.9e-13 Score=136.78 Aligned_cols=119 Identities=16% Similarity=0.174 Sum_probs=91.1
Q ss_pred ceeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEE-------------eceEECCCCEECCCCEEe--------c
Q 007143 321 TKLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-------------SDSVIGEGCTIGSNVLIE--------G 379 (616)
Q Consensus 321 ~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-------------~~s~IG~~~~Ig~~~~I~--------~ 379 (616)
+....+++.+++++.|++++.|.+++.||++|.|++++.| .+++||++|.|+++|+|. .
T Consensus 25 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~~~ 104 (270)
T 1j2z_A 25 FCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKK 104 (270)
T ss_dssp TCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTTSE
T ss_pred CCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCCcc
Confidence 3445567778888888888888888999999999999998 468899999999999996 4
Q ss_pred eEECCCCEECCCcEE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 380 SYIWDNVIIEDGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 380 s~I~~~v~Ig~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
+.|++++.|+.+++| .+++||++++|+.++.|..+++||++|.||.+++|.++++|+...
T Consensus 105 ~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a 165 (270)
T 1j2z_A 105 TLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGC 165 (270)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTC
T ss_pred EEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCce
Confidence 788888888888888 467777777777777666666666666666666655555555443
No 67
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.48 E-value=2.3e-13 Score=138.79 Aligned_cols=108 Identities=16% Similarity=0.183 Sum_probs=86.0
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEec-eEECCCCEECCCcEEe---------ceE
Q 007143 330 RALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG-SYIWDNVIIEDGCELR---------HVI 398 (616)
Q Consensus 330 ~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~-s~I~~~v~Ig~~~~I~---------~si 398 (616)
...++.+++++.|++++.||++|.|+++ .|. ++.||++|.|+.+++|.+ +.||++|.|+.++.|. +++
T Consensus 101 ~~~g~~I~p~a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~ 179 (276)
T 3gos_A 101 QREGFRVVPPATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTI 179 (276)
T ss_dssp HHHCCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCE
T ss_pred ccCCcEECCCcEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeE
Confidence 3445666777777777777777777776 554 778888888888888865 8888888888888884 488
Q ss_pred ECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 399 VCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
||++|+||.+|+|.+|++||++|+||+|++|.++++|...
T Consensus 180 IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~~~ 219 (276)
T 3gos_A 180 IEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDR 219 (276)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEET
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEccc
Confidence 8999999999988888888888888888888888877653
No 68
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.48 E-value=1.2e-13 Score=142.49 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=82.2
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEEec-eEECCCCEECCCcEEec---------eE
Q 007143 330 RALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLIEG-SYIWDNVIIEDGCELRH---------VI 398 (616)
Q Consensus 330 ~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I~~-s~I~~~v~Ig~~~~I~~---------si 398 (616)
+..++.|++++.|++++.||++|.|+++ .| .++.||++|.|+.+++|.+ +.|+++|.|+.++.|.+ ++
T Consensus 126 ~~~g~~I~p~a~I~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~ 204 (304)
T 3eg4_A 126 EKAGFRAVPNCIVRHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTI 204 (304)
T ss_dssp HHHCCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCE
T ss_pred ccCCcEEcCCEEECCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeE
Confidence 4456666777777777777777777765 44 3667777777777777753 77888888888887766 88
Q ss_pred ECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 399 VCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
||++|+||.+|+|.+|++||++|+||++++|.++++|....
T Consensus 205 IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~g~~Igd~~ 245 (304)
T 3eg4_A 205 IEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRA 245 (304)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETT
T ss_pred EcCCCEECCCCEEcCCcEECCCcEECCCCEEcCCeEECccc
Confidence 88888888888888888888888888888888888776543
No 69
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.47 E-value=1.1e-12 Score=137.96 Aligned_cols=69 Identities=23% Similarity=0.265 Sum_probs=34.3
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEE-eceEECCCCEECCCcEE
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLI-EGSYIWDNVIIEDGCEL 394 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I-~~s~I~~~v~Ig~~~~I 394 (616)
+++.+++++.|+++++|++++.||++|.|++++.| .++.||++|.|+++++| .++.|+++|.|+.++.|
T Consensus 108 ~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 108 ATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEE
T ss_pred CCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEE
Confidence 34444444444444444444555555555555555 24555555555555555 34555555555555554
No 70
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.47 E-value=7.3e-13 Score=134.75 Aligned_cols=102 Identities=16% Similarity=0.156 Sum_probs=77.8
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEec---------------eEECCCCEECCCc
Q 007143 329 YRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG---------------SYIWDNVIIEDGC 392 (616)
Q Consensus 329 ~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~---------------s~I~~~v~Ig~~~ 392 (616)
.+++++.|++++.|++++.||+++.|+++|+|+ +++||++|.|+++|+|.+ ++|++++.|++++
T Consensus 4 ~i~~~~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~ 83 (273)
T 3fs8_A 4 NISKSAIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTEN 83 (273)
T ss_dssp EECTTCEECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTC
T ss_pred ccCCCeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCC
Confidence 366777888888888888888888888888884 788899999999988864 7899999999888
Q ss_pred EE-eceEECCCcEECCCCEECCCCEECCCcEECCCCEEC
Q 007143 393 EL-RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVP 430 (616)
Q Consensus 393 ~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~ 430 (616)
.| .+++||+++.|+.++.|..+++||+++.|+.++.|.
T Consensus 84 ~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~ 122 (273)
T 3fs8_A 84 VIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQ 122 (273)
T ss_dssp EEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEEC
T ss_pred EEeCCCEECCCCEECCceEECCCCEECCCCEECccceeC
Confidence 88 467777777777777766666666666555544433
No 71
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.47 E-value=1.8e-13 Score=137.93 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=80.7
Q ss_pred cceEEcCCcEECCCCEE----CCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEe----ceEECCCCEECCCcEE
Q 007143 326 RGMYRALEIEQSRSAQV----GSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIE----GSYIWDNVIIEDGCEL 394 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I----~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~----~s~I~~~v~Ig~~~~I 394 (616)
+.+.+++++.+...+.+ ...+.||++|.|++++.|. +++||++|.|+++|.|. +++||++|.||.+|.|
T Consensus 62 ~~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I 141 (252)
T 3jqy_B 62 NKLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVIL 141 (252)
T ss_dssp CEEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEE
T ss_pred CEEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEE
Confidence 45667777666665555 4566788888888888883 68899999999999998 8999999999999999
Q ss_pred ece--------------------EECCCcEECCCCEECCCCEECCCcEECCCCEE
Q 007143 395 RHV--------------------IVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 395 ~~s--------------------iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v 429 (616)
.++ +||++|+||++|+|.+|++||++|+||++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 196 (252)
T 3jqy_B 142 RASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIV 196 (252)
T ss_dssp ECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTCEECTTCEE
T ss_pred ecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 764 67777777777777777777777777766665
No 72
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=1.3e-13 Score=132.99 Aligned_cols=117 Identities=15% Similarity=0.239 Sum_probs=84.9
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKTI 108 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~i 108 (616)
|+|||||+|.|+||+| .||+|+|++|+|||+|+++.+..+|+++|+|++++..+.+++++... +.. ...+.++
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~-~~~--~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSA-YKD--YKNIVVI 73 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHH-TTT--TTEEEE-
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhh-ccC--CCCEEEE
Confidence 6899999999999997 79999999999999999999999999999999998888899988762 111 1134444
Q ss_pred eCCCccCHHHHHHHHHhcccccCCEEEEeCce--ecchhHHHHHHHHHH
Q 007143 109 ESHNIISAGDALRLIYEQNVIHGDFVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 109 ~~~~~~~~gdalr~~~~~~~i~~dfLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
. ....|++++++.. ...+.+.|+++.||+ +....+..+++.|++
T Consensus 74 ~-~~~~g~~~si~~a--l~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 74 D-TSGKGYIEDLNEC--IGYFSEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp --------CCCCCTT--TTTCSSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred E-CCCCCcHHHHHHH--HHhCCCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 3 2345555566542 223345599999999 677899999999986
No 73
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.46 E-value=6e-14 Score=143.24 Aligned_cols=105 Identities=19% Similarity=0.261 Sum_probs=89.3
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCcEEec---------eEE
Q 007143 330 RALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRH---------VIV 399 (616)
Q Consensus 330 ~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~---------siI 399 (616)
++.++.|++.++|.+++.||+++.|++++.|. ++.||++|+|..++.+. +.||++|.|+.+|.|.+ ++|
T Consensus 181 I~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~V~I 259 (347)
T 3r5d_A 181 VPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIVISV 259 (347)
T ss_dssp CCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC------CCCCEE
T ss_pred ccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCccceEE
Confidence 45677777777777778888888888877775 77788888887777664 88999999999999865 799
Q ss_pred CCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 400 CDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 400 g~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
|++|+||.+++| |+.||++|+||+|++|.++++|+.
T Consensus 260 Gdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkdt~I~~ 295 (347)
T 3r5d_A 260 GEGCLIGANAGI--GIPLGDRNIVEAGLYITAGTKVAL 295 (347)
T ss_dssp CTTCEECTTCEE--CSCBCTTCEECTTCEECTTCEEEE
T ss_pred CCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEEe
Confidence 999999999999 899999999999999999999976
No 74
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.46 E-value=8e-13 Score=127.74 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=60.5
Q ss_pred ECCCCEECCCcEEC--CCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEec-eEECCCcEECCCCE
Q 007143 336 QSRSAQVGSFTVIG--YGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRH-VIVCDGVIMKAGAV 410 (616)
Q Consensus 336 i~~~~~I~~~~~Ig--~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~-siIg~~v~Ig~~~~ 410 (616)
+++++.|++++.|| ++|.|+++++|. +++||++|.|+.+|.|. ++.|++++.|+.++.|.+ ++||++|+||.+++
T Consensus 78 i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~ 157 (194)
T 3bfp_A 78 IHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSC 157 (194)
T ss_dssp ECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred cCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCE
Confidence 33444444444555 555555555553 56778888888777775 677788888888777754 66666666666666
Q ss_pred ECCCCEECCCcEECCCCEE
Q 007143 411 LKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 411 I~~g~vIg~~v~Ig~~~~v 429 (616)
|.++++||++++||++++|
T Consensus 158 i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 158 VLPNLSLADDSILGGGATL 176 (194)
T ss_dssp ECTTCEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEE
Confidence 6666666666666666654
No 75
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.46 E-value=7.5e-13 Score=130.43 Aligned_cols=93 Identities=24% Similarity=0.328 Sum_probs=59.8
Q ss_pred CCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEec-eEECCCcEECCCCEECC
Q 007143 337 SRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRH-VIVCDGVIMKAGAVLKP 413 (616)
Q Consensus 337 ~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~-siIg~~v~Ig~~~~I~~ 413 (616)
++.+.+.+.+.||++|.|+++++|. ++.||++|.|+.+|+|. +++|+++|.|+.++.|.+ ++||++|+||.+++|.+
T Consensus 103 ~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~ 182 (220)
T 4ea9_A 103 HPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIP 182 (220)
T ss_dssp CTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECT
T ss_pred CCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcC
Confidence 3334444444445555555555553 45677777777777775 577778888887777754 66677777777777776
Q ss_pred CCEECCCcEECCCCEE
Q 007143 414 GVVLSFKVVIGERFVV 429 (616)
Q Consensus 414 g~vIg~~v~Ig~~~~v 429 (616)
+++||++++||++++|
T Consensus 183 ~~~Ig~~~~igagsvv 198 (220)
T 4ea9_A 183 GVTIGADTIVGAGGVV 198 (220)
T ss_dssp TCEECTTCEECTTCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 6666666666666654
No 76
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.45 E-value=8.9e-13 Score=139.40 Aligned_cols=66 Identities=26% Similarity=0.317 Sum_probs=28.5
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE-eceEECCCCEECCCcEE
Q 007143 329 YRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI-EGSYIWDNVIIEDGCEL 394 (616)
Q Consensus 329 ~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I-~~s~I~~~v~Ig~~~~I 394 (616)
.+++++.|+++++|++++.||++|.|++++.|+ +++||++|.|+++|+| .++.|+++|.|+.+++|
T Consensus 116 ~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 116 VISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 333333444444444444444444444444443 4444444444444444 24444444444444444
No 77
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.45 E-value=1.2e-12 Score=138.96 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=50.6
Q ss_pred eEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe--------------------ceEECCCC
Q 007143 328 MYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE--------------------GSYIWDNV 386 (616)
Q Consensus 328 i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~--------------------~s~I~~~v 386 (616)
+++++++.|+++|.|++++.||++|.|+++++|. +++||++|.|+++++|. +++|+++|
T Consensus 150 v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v 229 (372)
T 3pmo_A 150 ARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDV 229 (372)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSC
T ss_pred CEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCC
Confidence 3333333333444444444444444444444443 45566666666666663 46677777
Q ss_pred EECCCcEE-----eceEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 387 IIEDGCEL-----RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 387 ~Ig~~~~I-----~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
.||.+++| .+++||+++.|+.++.|..+++||++|.|+.
T Consensus 230 ~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG~~~~I~~ 273 (372)
T 3pmo_A 230 EIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAA 273 (372)
T ss_dssp EECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EECCCcEEccCcccceEECCCCEECCCCEECCCCEECCCCEECC
Confidence 77777776 3455555555555544444444444433333
No 78
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.45 E-value=2e-13 Score=141.29 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=81.0
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEEe-ceEECCCCEECCCcEEec---------e
Q 007143 329 YRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRH---------V 397 (616)
Q Consensus 329 ~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~---------s 397 (616)
+++.++.+.+++.|++++.||++|.|+++ .| .++.||++|.|+.+++|. ++.||++|.|+.++.|.+ +
T Consensus 141 ~~~~~~~I~p~a~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v 219 (316)
T 3tk8_A 141 FAAGGFRVVPPAIARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPV 219 (316)
T ss_dssp HHHHCCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCC
T ss_pred eecCCcEEeCCeEEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCc
Confidence 34556677777777777777777777766 34 366777777777777774 577777777777777765 7
Q ss_pred EECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 398 IVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 398 iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
+||++|+||.+|+|.+|++||++|+||+|++|.++++|..
T Consensus 220 ~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~~t~I~d 259 (316)
T 3tk8_A 220 IIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQSTKIYD 259 (316)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEE
T ss_pred EECCCCEECCCCEEcCCCEECCCCEEcCCCEEcCCeeecc
Confidence 8888888888888888888888888888888888777764
No 79
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.45 E-value=1.4e-12 Score=138.64 Aligned_cols=113 Identities=21% Similarity=0.252 Sum_probs=74.3
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEe--------
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELR-------- 395 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~-------- 395 (616)
+.+.+++++.|++++.|++++.||++|.|+++++|+ ++.||++|.|+++++|. ++.|+++|.|+.+++|.
T Consensus 130 ~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~ 209 (372)
T 3pmo_A 130 ADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFAN 209 (372)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCEEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccccc
Confidence 344555555555555665566666666666666664 66666666666666664 57788888888888774
Q ss_pred ------------ceEECCCcEECCCCEEC----CCCEECCCcEECCCCEECCCCEEccc
Q 007143 396 ------------HVIVCDGVIMKAGAVLK----PGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 396 ------------~siIg~~v~Ig~~~~I~----~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
+++||++|.||++++|. .+++||++++|+.++.|..+++|+..
T Consensus 210 ~~g~~~~i~~~g~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG~~ 268 (372)
T 3pmo_A 210 EKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDH 268 (372)
T ss_dssp ETTEEEECCCCCCEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTT
T ss_pred cCCcceeccccCCeEECCCCEECCCcEEccCcccceEECCCCEECCCCEECCCCEECCC
Confidence 68889999998888875 34566666666665555555555443
No 80
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.45 E-value=2.3e-13 Score=140.38 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=75.9
Q ss_pred ecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEec---------eEECCCCEECCCcEE
Q 007143 325 RRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG---------SYIWDNVIIEDGCEL 394 (616)
Q Consensus 325 ~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~---------s~I~~~v~Ig~~~~I 394 (616)
++++++++++.|.++ .|+.++.||++|.|+.+++|+ ++.||++|.|+.++.|.+ ++|+++|.||.+|.|
T Consensus 139 ~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I 217 (304)
T 3eg4_A 139 RHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEV 217 (304)
T ss_dssp BTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEE
T ss_pred CCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEE
Confidence 344555555555554 555566667777776666665 477777777777777765 788888888888866
Q ss_pred -eceEECCCcEECCCCEECCCCEECCCc-------EECCCCEECCCCEEcc
Q 007143 395 -RHVIVCDGVIMKAGAVLKPGVVLSFKV-------VIGERFVVPAHSKVSL 437 (616)
Q Consensus 395 -~~siIg~~v~Ig~~~~I~~g~vIg~~v-------~Ig~~~~v~~~~~v~~ 437 (616)
.+++||++|+||++++|.+++.|++++ .|+++++|.+|+++..
T Consensus 218 ~~gv~IG~~avIgagsvV~~g~~Igd~~~g~~~~~~Ip~~svV~~Gs~v~k 268 (304)
T 3eg4_A 218 VEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVVVAGTMPGK 268 (304)
T ss_dssp CTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEECC
T ss_pred cCCcEECCCcEECCCCEEcCCeEECccceeeeccCEeCCCCEEecCcEecC
Confidence 467777777777777777777777665 3666666666666654
No 81
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.45 E-value=1.2e-12 Score=129.81 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=125.5
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
++.|||||+|.|+||. +|+|+|++|+|||+|+++.+..+| +++|+|++. .+.+.+++... ++.+
T Consensus 3 ~~~aiIlA~G~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~~------g~~~- 67 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQF------GAQV- 67 (229)
T ss_dssp CEEEEEECCSCCSSSS------CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHHT------TCEE-
T ss_pred cEEEEEEcCCCCCCCC------CcccceECCEEHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHHc------CCEE-
Confidence 5789999999999995 599999999999999999999998 699998884 46788777542 3444
Q ss_pred EEeCC-----CccCHHHHHHHHHhcccc-cCC-EEEEeCce--ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCC
Q 007143 107 TIESH-----NIISAGDALRLIYEQNVI-HGD-FVLISGDT--VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPI 177 (616)
Q Consensus 107 ~i~~~-----~~~~~gdalr~~~~~~~i-~~d-fLlv~gD~--i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~ 177 (616)
+..+ ...+..++++... ..+ ..+ |+++.||+ +...++..+++.|++.. ..+.+|+. ....|
T Consensus 68 -~~~~~~~~~~~~~~~~~v~~al--~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~---~~~~~~~~-~~~~p--- 137 (229)
T 1qwj_A 68 -HRRSSETSKDSSTSLDAIVEFL--NYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEG---YDSVFSVV-RRHQF--- 137 (229)
T ss_dssp -EECCGGGSSTTCCHHHHHHHHH--TTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSC---CSEEEEEE-EECCC---
T ss_pred -EeChhhhcCCCCcHHHHHHHHH--HhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCC---CCEEEEEe-eccCh---
Confidence 3322 2233346666433 233 334 99999998 55678999999987642 12344443 22112
Q ss_pred CcccccCCCceEEEEeCCCCeEEEeee--cCCCCCcceEeehHhhhcCCceEEEeccccceeEeeCHhHHhhhhcCCChh
Q 007143 178 THQSRLGTDELFMAIDPNTKQLLYYED--KADHSKGTICLDKMLLAENPSISLHNDKQDCYIDICSPEVLSLFTDNFDYQ 255 (616)
Q Consensus 178 ~~~~r~~~~~~vv~id~~~~rvl~~~e--~p~~~~~~~~l~~~l~~~~~~~~ir~dl~d~gIyIcsp~vl~lf~dnfd~q 255 (616)
..++ + .| + +..+.+ .+....+. .. ...+. ..+.+.|||+++++++ +
T Consensus 138 ---~~~~----v--~~---~-~~~~~~~~~~~~~~~~---~~---~~~~~----~~~~n~giY~~~~~~l--~------- 185 (229)
T 1qwj_A 138 ---RWSE----I--QK---G-VREVTEPLNLNPAKRP---RR---QDWDG----ELYENGSFYFAKRHLI--E------- 185 (229)
T ss_dssp ---EECC----C--CS---S-TTCCCCBSSSBTTBCC---CT---TTSCC----EEEEEEEEEEEEHHHH--H-------
T ss_pred ---hHhh----c--cc---c-cccccccccccccccc---CC---CCCCc----eEEEeeEEEEEEHHHh--c-------
Confidence 1211 1 11 1 101111 11000000 00 00001 1245789999999876 0
Q ss_pred hHHHHhhhhhhhccccCceEEEEEccccchhhccChhhHHHHhhhh
Q 007143 256 HLRRHFVKGLLLDDIMGYKIFTHEIHSSYAARIDNYRSYDIVSKDI 301 (616)
Q Consensus 256 ~lr~dfv~~~l~~~i~g~~I~~~~~~~~y~~~V~s~~sY~~a~~di 301 (616)
+ ....|..+..+..++.+|.+|+++++|..+...+
T Consensus 186 -------~----~~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~ 220 (229)
T 1qwj_A 186 -------M----GYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRV 220 (229)
T ss_dssp -------T----TCSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHH
T ss_pred -------c----ccccCCeEEEEECCcccccCCCCHHHHHHHHHHH
Confidence 0 1113455543266557999999999999886654
No 82
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.45 E-value=4.6e-13 Score=131.54 Aligned_cols=105 Identities=18% Similarity=0.211 Sum_probs=82.2
Q ss_pred cceEEcCCcEECCC-CEECCC---cEECCCCEECCCCEEec----eEECCCCEECCCCEE----eceEECCCCEECCCcE
Q 007143 326 RGMYRALEIEQSRS-AQVGSF---TVIGYGTKIGSNSKISD----SVIGEGCTIGSNVLI----EGSYIWDNVIIEDGCE 393 (616)
Q Consensus 326 ~~i~~~~~v~i~~~-~~I~~~---~~Ig~~~~Ig~~~~I~~----s~IG~~~~Ig~~~~I----~~s~I~~~v~Ig~~~~ 393 (616)
+.+++++++.|.+. +.|.++ +.||++|.|++++.|.. ++||++|.|++++.+ .+++|+++|.|+.+|+
T Consensus 35 ~~v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~ 114 (215)
T 2wlg_A 35 NSVYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYE 114 (215)
T ss_dssp CEEEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEE
T ss_pred CEEEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEE
Confidence 46888999888877 566653 99999999999999963 899999999996665 5789999999999999
Q ss_pred Eece--------------------EECCCcEECCCCEECCCCEECCCcEECCCCEEC
Q 007143 394 LRHV--------------------IVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVP 430 (616)
Q Consensus 394 I~~s--------------------iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~ 430 (616)
|.++ +||++|+||.+++|.+|++||++|+|+++++|.
T Consensus 115 I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~ 171 (215)
T 2wlg_A 115 IRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLY 171 (215)
T ss_dssp EESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred EECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEEc
Confidence 9753 666666666666666666666666666666543
No 83
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.45 E-value=1.4e-12 Score=135.06 Aligned_cols=51 Identities=18% Similarity=0.358 Sum_probs=22.5
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEE
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLI 377 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I 377 (616)
++.+++++.|++.|.|++++.||++|.|+++++|. +++||++|.|+++++|
T Consensus 19 ~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 19 NAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVV 70 (305)
T ss_dssp TSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEe
Confidence 33344444444444444444444444444444442 4444444444444444
No 84
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.45 E-value=1.1e-12 Score=131.62 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=83.2
Q ss_pred ecceEEcCCcEECCCCEECCCc----EECCCCEECCCCEEe------------------------ceEECCCCEECCCCE
Q 007143 325 RRGMYRALEIEQSRSAQVGSFT----VIGYGTKIGSNSKIS------------------------DSVIGEGCTIGSNVL 376 (616)
Q Consensus 325 ~~~i~~~~~v~i~~~~~I~~~~----~Ig~~~~Ig~~~~I~------------------------~s~IG~~~~Ig~~~~ 376 (616)
.+++.+++++.|+++|.|.+.+ .||++|.|+++++|. +++||++|.||++|.
T Consensus 75 ~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~ 154 (247)
T 1qre_A 75 IGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQ 154 (247)
T ss_dssp EESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCE
T ss_pred eCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCE
Confidence 4678888888888888887644 899999999999995 389999999999999
Q ss_pred Eec-eEECCCCEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEc
Q 007143 377 IEG-SYIWDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVS 436 (616)
Q Consensus 377 I~~-s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~ 436 (616)
|.+ ++|+++|.||.+|.|.++.||++|+||++++| + ++.|+++++|++++++.
T Consensus 155 I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV-~------~~~I~~~~~v~~g~vv~ 208 (247)
T 1qre_A 155 VHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA-I------GVTIPDGRYIPAGMVVT 208 (247)
T ss_dssp EEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE-E------SCEECTTBEECTTCEEC
T ss_pred EcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE-C------CeEeCCCCEECCCCEEe
Confidence 987 99999999999999966666666666666655 4 45555555556666664
No 85
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.44 E-value=1.4e-12 Score=137.95 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=64.7
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEEe--------------------ceEECC
Q 007143 326 RGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLIE--------------------GSYIWD 384 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I~--------------------~s~I~~ 384 (616)
.++.++.++.|+++|.|+.++.||++|.|+++++| .+++||++|.|+++++|. +++|++
T Consensus 131 ~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd 210 (357)
T 4e79_A 131 ENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGN 210 (357)
T ss_dssp TTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEEECT
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEEEcC
Confidence 34445555555555555556666666666666666 477788888888888874 578888
Q ss_pred CCEECCCcEE-----eceEECCCcEECCCCEECCCCEECCCcEECCC
Q 007143 385 NVIIEDGCEL-----RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGER 426 (616)
Q Consensus 385 ~v~Ig~~~~I-----~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~ 426 (616)
+|.||.+|+| .+++||+++.|+.++.|+.+|.||++|.|+.+
T Consensus 211 ~v~IG~~~~I~~g~~~~t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~ 257 (357)
T 4e79_A 211 DVRIGSNCSIDRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAK 257 (357)
T ss_dssp TCEECTTCEECCCSSSCEEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CcEEccccEEeccccCCccccCCcccCCCcccCCCeEECCCCEECCC
Confidence 8888888888 34566665555555555554554444433333
No 86
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.44 E-value=1.3e-12 Score=137.39 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=68.0
Q ss_pred ecceEEcCCcEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEEe--------------------ceEEC
Q 007143 325 RRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLIE--------------------GSYIW 383 (616)
Q Consensus 325 ~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I~--------------------~s~I~ 383 (616)
..++.+++++.|++++.|+.++.||++|.|+++++| .+++||++|.|+++++|. +++|+
T Consensus 125 ~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IG 204 (341)
T 3eh0_A 125 ESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIG 204 (341)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEEC
T ss_pred CCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEEC
Confidence 334455555555555555566666666666666666 478888888888888883 47899
Q ss_pred CCCEECCCcEEe-----ceEECCCcEECCCCEECCCCEECCCcEECCCCE
Q 007143 384 DNVIIEDGCELR-----HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFV 428 (616)
Q Consensus 384 ~~v~Ig~~~~I~-----~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~ 428 (616)
++|.||.+|.|. +++||+++.|+.++.|+.++.||++|.|+.++.
T Consensus 205 d~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~ 254 (341)
T 3eh0_A 205 DRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVI 254 (341)
T ss_dssp SSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CCcEECCccEeeccccCceEeccceEECCCCEEeCCcEECCCCEECCCCE
Confidence 999999998883 566666666665555555555555444444433
No 87
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.44 E-value=2.8e-12 Score=128.49 Aligned_cols=121 Identities=15% Similarity=0.139 Sum_probs=80.3
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHH-HHHHHHHhcCCCCCCCcEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSK-QVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~-~i~~~l~~~~~~~~~~~~i 105 (616)
.+.|||||+|.|+||++ ..+||+|+|++|+|||+|+|+.+..++ +++|+|++++... .+++.+....+. ..+
T Consensus 3 ~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~----~~~ 76 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISD----DRI 76 (246)
T ss_dssp CEEEEEECC-----C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCC----TTE
T ss_pred ccEEEEECCccccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCC----CCE
Confidence 46899999999999987 568999999999999999999999997 9999999986543 355555442221 124
Q ss_pred EEEeCCCccCHHHHHHH----HHhccc-ccCC-EEEEeCce--ecchhHHHHHHHHHHh
Q 007143 106 KTIESHNIISAGDALRL----IYEQNV-IHGD-FVLISGDT--VSNMLLTQALQEHKER 156 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~----~~~~~~-i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~ 156 (616)
.++... .+..++++. +..... -..+ +|++.||. +....+..+++.|++.
T Consensus 77 ~~~~~~--~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~ 133 (246)
T 3f1c_A 77 VVIEGG--EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALET 133 (246)
T ss_dssp EEEECC--SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred EEECCC--CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 455432 233444443 221100 1134 89999998 7778999999999874
No 88
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.43 E-value=2.4e-13 Score=137.81 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=89.3
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCcEEec---------eEE
Q 007143 330 RALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRH---------VIV 399 (616)
Q Consensus 330 ~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~---------siI 399 (616)
++.++.|++.++|.+++.||+++.|+++++|. ++.|+.+|+|..++.+ ++.||++|.|+.++.|.. ++|
T Consensus 158 I~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~i-Gv~IGd~v~IgpGa~IgG~~~~~~~~~V~I 236 (332)
T 3fsy_A 158 VPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISA-GVVVGDGSDVGGGASIMGTLSGGGTHVISI 236 (332)
T ss_dssp CCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECT-TCEECTTCEECTTCEECSBCC---CCBCEE
T ss_pred cCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceec-ceEECCCCEECCCCEEcCCCCCCCccceEE
Confidence 56778888888888888888888888888875 7778888888665444 488999999999999965 899
Q ss_pred CCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEc
Q 007143 400 CDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVS 436 (616)
Q Consensus 400 g~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~ 436 (616)
|++|+||.+++| ++.||++|+||+|++|.++++|.
T Consensus 237 GDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~I~ 271 (332)
T 3fsy_A 237 GKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTRVT 271 (332)
T ss_dssp CTTCEECTTCEE--CSCBCSSCEECTTCEECTTCEEE
T ss_pred CCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEE
Confidence 999999999999 89999999999999999999995
No 89
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.43 E-value=4.4e-12 Score=125.13 Aligned_cols=117 Identities=16% Similarity=0.240 Sum_probs=84.6
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHC-CCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAA-GVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~-Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
.+.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|..+ |+++|+|++++..+.+.+++.. .| +.++.
T Consensus 4 ~~~aiIlAaG~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~-~~----~~~v~ 75 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE-SI----DVDLS 75 (228)
T ss_dssp CEEEEEECCCCC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT-TS----SSEEE
T ss_pred ceEEEEECCccccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH-hC----CCcEE
Confidence 47899999999999972 5799999999999999999999998 8999999999877777665543 22 24566
Q ss_pred EEeCCCccCHHHHHHHHHhcccccC--C-EEEEeCce--ecchhHHHHHHHHHHh
Q 007143 107 TIESHNIISAGDALRLIYEQNVIHG--D-FVLISGDT--VSNMLLTQALQEHKER 156 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~~--d-fLlv~gD~--i~~~~l~~~l~~h~~~ 156 (616)
++.. ..|..++++... ..+.. + ++++.||. +....+..+++.|++.
T Consensus 76 ~~~~--~~~~~~sv~~al--~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 76 FAIP--GKERQDSVYSGL--QEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp EECC--CSSHHHHHHHHH--TTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred EECC--CCCHHHHHHHHH--HhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 6642 246667777543 33442 4 77888987 5667899999998764
No 90
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.42 E-value=4.1e-12 Score=125.50 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=77.7
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSKQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i 105 (616)
++|.|||||+|.|+||++ ..||+|+|++|+|||+|+++.|..++ +++|+|++++..+.+++ +..... ..+
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~-----~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP-----QVR 75 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT-----TSE
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC-----Cce
Confidence 458999999999999997 67999999999999999999999985 99999999876556666 433111 124
Q ss_pred EEEeCCCccCHHHHHHHHHhc-cc----ccCC-EEEEeCce--ecchhHHHHHHHHHH
Q 007143 106 KTIESHNIISAGDALRLIYEQ-NV----IHGD-FVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~-~~----i~~d-fLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
.++ ....+++++++..... .. ...+ ++++.||. +....+..+++.|++
T Consensus 76 ~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~ 131 (231)
T 1vgw_A 76 VWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGN 131 (231)
T ss_dssp EEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTT
T ss_pred EEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhh
Confidence 444 2345777777654321 00 0234 89999997 455679999988864
No 91
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.42 E-value=1.9e-12 Score=141.12 Aligned_cols=71 Identities=14% Similarity=0.247 Sum_probs=51.1
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEe-ceEECCCCEECCCcEE
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCEL 394 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I 394 (616)
...+++.+++++.|++++.|. ++.||++|.|++++.|.+++||++|.||++|+|. +++|++++.||++|.|
T Consensus 282 ~i~~~~~ig~~~~I~~~~~i~-~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i 353 (459)
T 4fce_A 282 IIEGHVILGDRVRIGTGCVLK-NCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEI 353 (459)
T ss_dssp EEEEEEEECTTCEECTTCEEE-SCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEE
T ss_pred eeccceEECCCCEECCCCEEe-ccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEE
Confidence 344557777777777777775 5788888888888888777888888888777775 6666666666655544
No 92
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.41 E-value=2.3e-13 Score=131.78 Aligned_cols=109 Identities=20% Similarity=0.197 Sum_probs=78.3
Q ss_pred EEcCCcEECC--CCEECCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEec-eEECCCCEECCCcEE-eceEECC
Q 007143 329 YRALEIEQSR--SAQVGSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEG-SYIWDNVIIEDGCEL-RHVIVCD 401 (616)
Q Consensus 329 ~~~~~v~i~~--~~~I~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~-s~I~~~v~Ig~~~~I-~~siIg~ 401 (616)
.+++++.|.+ .|.++.++.||++|.|+++++|. .++||++|.||++|.|.. +...+......++.+ .+++||+
T Consensus 58 ~ig~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 137 (195)
T 3nz2_A 58 HLGHKSCVQPPFHCEFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIED 137 (195)
T ss_dssp EECTTCEECSSEEESCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECT
T ss_pred hcCCCcEEcCCeEEEeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECC
Confidence 3677777777 46677888888888888888884 458999999999999964 334444444444444 3567788
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEE----CCCCEEcc
Q 007143 402 GVIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSL 437 (616)
Q Consensus 402 ~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~ 437 (616)
+|+||.+++|.+|++||++++||+|++| |+++++..
T Consensus 138 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v~~G 177 (195)
T 3nz2_A 138 DVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGG 177 (195)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECSCBCSSEEEET
T ss_pred CCEEcCCCEECCCCEECCCCEECCCCEEccccCCCcEEEc
Confidence 8888888888777777777777777764 44555444
No 93
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.41 E-value=1.4e-12 Score=133.04 Aligned_cols=103 Identities=27% Similarity=0.332 Sum_probs=65.2
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe---------ceEECCCCEECCCcEEec
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE---------GSYIWDNVIIEDGCELRH 396 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~---------~s~I~~~v~Ig~~~~I~~ 396 (616)
++++++++.|+++ .|+.++.||++|.|+++++|+ +++||++|.|++++.|. +++|+++|.||.+|.|
T Consensus 116 ~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I-- 192 (276)
T 3gos_A 116 GAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEV-- 192 (276)
T ss_dssp TCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEE--
T ss_pred CCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEE--
Confidence 3444444444443 444466666666666666665 36666666666666663 2555555555555554
Q ss_pred eEECCCcEECCCCEECCCCEECCCcEECCCC-------EECCCCEE
Q 007143 397 VIVCDGVIMKAGAVLKPGVVLSFKVVIGERF-------VVPAHSKV 435 (616)
Q Consensus 397 siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~-------~v~~~~~v 435 (616)
..+++||++|+|+.|++|..+++|++.+ .||+++++
T Consensus 193 ---~~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svv 235 (276)
T 3gos_A 193 ---VEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVV 235 (276)
T ss_dssp ---CTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred ---CCCCEECCCCEECCCCEECCCcEEccccccceeccccCCCcEE
Confidence 6677777777777777777777777776 78888888
No 94
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.41 E-value=2.6e-12 Score=121.76 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=77.0
Q ss_pred eecceEEcCCcEECCCCEECCC---cEECCCCEECCCCEEe-----ceEECCCCEECCCCEEeceEECCCCEECCCcEEe
Q 007143 324 ERRGMYRALEIEQSRSAQVGSF---TVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELR 395 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~---~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~ 395 (616)
..+++++++++.|++++.|.+. +.||++|.|++++.|. +++||++|.|+.++.|.+++|+++|.||.++.|
T Consensus 27 i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i- 105 (173)
T 1xhd_A 27 ITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSII- 105 (173)
T ss_dssp EEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEE-
T ss_pred EECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEE-
Confidence 3467889999999999999765 8999999999999997 899999999999999999999999999988877
Q ss_pred ceEECCCcEECCCCEECCCCEECCCcEECCCCEE
Q 007143 396 HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 396 ~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v 429 (616)
..++.||++++|+.+++|.++..|++++++
T Consensus 106 ----~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv 135 (173)
T 1xhd_A 106 ----LDGAEIGEGAFIGAGSLVSQGKKIPPNTLA 135 (173)
T ss_dssp ----CTTCEECTTCEECTTCEECTTCEECTTEEE
T ss_pred ----cCCCEECCCCEECCCCEECCCcEeCCCCEE
Confidence 334444444444444444444444444443
No 95
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.41 E-value=3.6e-12 Score=131.92 Aligned_cols=74 Identities=16% Similarity=0.091 Sum_probs=54.4
Q ss_pred ceeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-----ceEECCCCEECCCCEEe--------------ceE
Q 007143 321 TKLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIE--------------GSY 381 (616)
Q Consensus 321 ~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~--------------~s~ 381 (616)
+....++++++.++.|++.+.|.+++.||++|.|+++++|. +++||++|.|+++|.|. ...
T Consensus 31 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~Ig~~~q~~~~~~~~~~~i~ 110 (305)
T 3t57_A 31 YCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLC 110 (305)
T ss_dssp TCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEEEECCCCTTCCTTCCEEEE
T ss_pred CCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEeCccccccceecCCCceEE
Confidence 44455677777777777777777788888888888888885 57888888888888883 146
Q ss_pred ECCCCEECCCcEE
Q 007143 382 IWDNVIIEDGCEL 394 (616)
Q Consensus 382 I~~~v~Ig~~~~I 394 (616)
|++++.|+++|+|
T Consensus 111 IG~~~~I~~~~~I 123 (305)
T 3t57_A 111 IGNNNEIREFCSI 123 (305)
T ss_dssp ECSSCEECTTCEE
T ss_pred ECCCcccCceEEE
Confidence 6666666666666
No 96
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.41 E-value=2e-12 Score=122.59 Aligned_cols=100 Identities=24% Similarity=0.245 Sum_probs=77.2
Q ss_pred eecceEEcCCcEECCCCEECCC---cEECCCCEECCCCEEe-----ceEECCCCEECCCCEEeceEECCCCEECCCcEEe
Q 007143 324 ERRGMYRALEIEQSRSAQVGSF---TVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELR 395 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~---~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~ 395 (616)
..+++++++++.|++++.|.++ +.||++|.|++++.|. +++||++|.|+++|.|.+++|++++.||.++.|.
T Consensus 25 i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~ 104 (173)
T 1v3w_A 25 VIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVIL 104 (173)
T ss_dssp EEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEEC
T ss_pred EeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEe
Confidence 3467889999999999999764 8999999999999996 5999999999999999999999999999988873
Q ss_pred -ceEECCCcEECCCCEECCCCEECCCcEE
Q 007143 396 -HVIVCDGVIMKAGAVLKPGVVLSFKVVI 423 (616)
Q Consensus 396 -~siIg~~v~Ig~~~~I~~g~vIg~~v~I 423 (616)
++.||++++||++++|.+++.|++++++
T Consensus 105 ~~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 105 DGAKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp TTCEECSSEEECTTCEECTTCEECTTEEE
T ss_pred CCCEECCCCEECCCCEECCCcEeCCCcEE
Confidence 3555555555544444444444443333
No 97
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.40 E-value=2.9e-12 Score=123.46 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=71.3
Q ss_pred eeecceEEcCCcEECCCCEECC---CcEECCCCEECCCCEEe------ceEECCCCEECCCCEEeceEECCCCEECCCcE
Q 007143 323 LERRGMYRALEIEQSRSAQVGS---FTVIGYGTKIGSNSKIS------DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCE 393 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~---~~~Ig~~~~Ig~~~~I~------~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~ 393 (616)
...+++++++++.|++++.|.. ++.||++|.|++++.|. +++||++|.||.+|.|.+++|+++|.||.+|.
T Consensus 47 ~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~ 126 (191)
T 3ixc_A 47 RIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSI 126 (191)
T ss_dssp EEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCE
T ss_pred EEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCE
Confidence 3456788888888888888864 45889999999999996 89999999999999999888888888887776
Q ss_pred EeceEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 394 LRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 394 I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
| .++++||++|+|++|++|.++..|++
T Consensus 127 I-----~~~~~Ig~~~~Ig~gsvV~~~~~i~~ 153 (191)
T 3ixc_A 127 V-----MDRAVMEEGSMLAAGSLLTRGKIVKS 153 (191)
T ss_dssp E-----CTTCEECTTCEECTTCEECTTCEECT
T ss_pred E-----eCCeEECCCCEECCCCEECCCcCcCC
Confidence 6 34444444444444433333333333
No 98
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.38 E-value=4.2e-12 Score=139.22 Aligned_cols=199 Identities=11% Similarity=0.110 Sum_probs=136.1
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCccccee---CCeehHHHHHHHHHH--------CC----CcEEEEEcCCcHHHHHHH
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPL---VNVPMINYTLAWLEA--------AG----VAEVFVFCCAHSKQVIDY 91 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi---~g~PlI~y~Le~L~~--------~G----v~eI~vv~~~~~~~i~~~ 91 (616)
.++.+||||||.||||+ ...||+|+|| .|+|+|+++++.|.+ .| +..+++...+..+.+++|
T Consensus 101 ~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~ 177 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEF 177 (505)
T ss_dssp TCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHH
T ss_pred CceEEEEEcCCccccCC---CCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHH
Confidence 56999999999999996 3789999999 799999999999887 36 555555555568899999
Q ss_pred HHhcCCCCCCCcEEEEEeC---------------------CCccCHHHHHHHHHhcccc----c---CCEEEEeCcee-c
Q 007143 92 LENSEWFSQPNFTVKTIES---------------------HNIISAGDALRLIYEQNVI----H---GDFVLISGDTV-S 142 (616)
Q Consensus 92 l~~~~~~~~~~~~i~~i~~---------------------~~~~~~gdalr~~~~~~~i----~---~dfLlv~gD~i-~ 142 (616)
+++..|....+-+|.++.+ ..+.|+|++++.+....++ . ..|+|+++|.+ .
T Consensus 178 f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~ 257 (505)
T 1jv1_A 178 FTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILV 257 (505)
T ss_dssp HHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTC
T ss_pred HHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcccc
Confidence 9875443111113555443 2467999999877543222 1 33999999995 8
Q ss_pred chhHHHHHHHHHHhhccCCCceEEEEEec-CCCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhhh
Q 007143 143 NMLLTQALQEHKERKKKDNNAVMTMIIKK-SKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLLA 221 (616)
Q Consensus 143 ~~~l~~~l~~h~~~~~~d~~a~mT~v~~~-~~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~~ 221 (616)
......++..|..+ ++.+|+.+.+ ..+ ..++| ++..+....+++.|.++|... .+.+.
T Consensus 258 ~~~d~~~lg~~~~~-----~~~~~~~v~~k~~~-----~e~~G----vl~~~dg~~~vvEy~E~p~~~-------~~~~~ 316 (505)
T 1jv1_A 258 KVADPRFIGFCIQK-----GADCGAKVVEKTNP-----TEPVG----VVCRVDGVYQVVEYSEISLAT-------AQKRS 316 (505)
T ss_dssp CTTCHHHHHHHHHT-----TCSEEEEEEECCST-----TCSCC----EEEEETTEEEEECGGGSCHHH-------HHCBC
T ss_pred ccchHHHHHHHHHc-----CCCEEEEEEEccCC-----ccCcc----eEEEECCeEEEEEEeeCCHHH-------hhhcc
Confidence 78778899999875 4778877765 332 34667 666653334567777766410 00010
Q ss_pred cCCceEEEeccccceeEeeCHhHHhhhhcC
Q 007143 222 ENPSISLHNDKQDCYIDICSPEVLSLFTDN 251 (616)
Q Consensus 222 ~~~~~~ir~dl~d~gIyIcsp~vl~lf~dn 251 (616)
+.=...+++.++++|+++++++..+.+.
T Consensus 317 --~~g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 317 --SDGRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp --TTSSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred --cccccccceeeEEEEEecHHHHHHHHHh
Confidence 0001235678899999999998877654
No 99
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.38 E-value=3e-12 Score=122.65 Aligned_cols=72 Identities=22% Similarity=0.281 Sum_probs=62.9
Q ss_pred eeecceEEcCCcEECCCCEECCCc---EECCCCEECCCCEE------------eceEECCCCEECCCCEEeceEECCCCE
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFT---VIGYGTKIGSNSKI------------SDSVIGEGCTIGSNVLIEGSYIWDNVI 387 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~---~Ig~~~~Ig~~~~I------------~~s~IG~~~~Ig~~~~I~~s~I~~~v~ 387 (616)
...+++.+++++.|++++.|.+++ .||++|.|++++.| .+++||++|.||.+|.|.+++|+++|.
T Consensus 29 ~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~ 108 (187)
T 3r3r_A 29 VVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVL 108 (187)
T ss_dssp EEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEE
T ss_pred EEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCE
Confidence 345678899999999999987654 99999999999999 689999999999999999988888888
Q ss_pred ECCCcEE
Q 007143 388 IEDGCEL 394 (616)
Q Consensus 388 Ig~~~~I 394 (616)
||.++.|
T Consensus 109 Ig~~~~I 115 (187)
T 3r3r_A 109 VGMGSIV 115 (187)
T ss_dssp ECTTCEE
T ss_pred ECCCCEE
Confidence 8887777
No 100
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.38 E-value=2.7e-12 Score=124.95 Aligned_cols=131 Identities=11% Similarity=0.083 Sum_probs=91.0
Q ss_pred hccccccccCCCcccCCCcceeeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe----ceEECCCCEECCCCEE
Q 007143 302 IQRWTYPYVPDVKFCGNRATKLERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLI 377 (616)
Q Consensus 302 l~r~~~p~~p~~~~~~~~~~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I 377 (616)
+.++.|....+........+.....++++++++.|+++|.|.+++.||++|.|++++.|. +++||++|.||++|+|
T Consensus 27 ~~~~~~~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 27 LKKIGFLSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp HHTTCCSEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred HhhcCCeEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 344444444433222222233333489999999999999999999999999999999993 4999999999999999
Q ss_pred ece--------------------EECCCCEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 378 EGS--------------------YIWDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 378 ~~s--------------------~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
.++ ....+++||++|.| |.+++|..+++|+++|+|+.+++|..+ |++++++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~I-----G~~~~I~~gv~Ig~~~~Ig~gsvV~~~--v~~~~v~~G 179 (205)
T 3vbi_A 107 YAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVII-----GAHSIIFPNVVIGEGVAVGAMSMVKES--LDDWYIYVG 179 (205)
T ss_dssp ESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEE-----CTTCEECSSCEECTTCEECTTCEECSC--BCTTEEEET
T ss_pred EeCCCCcccccccCcccccccceeccCCEEECCCCEE-----CCCCEEcCCCEECCCCEEcCCCEECCc--cCCCeEEEc
Confidence 421 11244555555555 666666666667777777777777665 677777766
Q ss_pred cc
Q 007143 438 LQ 439 (616)
Q Consensus 438 ~~ 439 (616)
.|
T Consensus 180 ~P 181 (205)
T 3vbi_A 180 VP 181 (205)
T ss_dssp TT
T ss_pred cC
Confidence 44
No 101
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.37 E-value=7.6e-12 Score=133.20 Aligned_cols=44 Identities=18% Similarity=0.323 Sum_probs=20.5
Q ss_pred cEECCCCEECCCcEECCCCEECCCCEE-eceEECCCCEECCCCEE
Q 007143 334 IEQSRSAQVGSFTVIGYGTKIGSNSKI-SDSVIGEGCTIGSNVLI 377 (616)
Q Consensus 334 v~i~~~~~I~~~~~Ig~~~~Ig~~~~I-~~s~IG~~~~Ig~~~~I 377 (616)
+.|++++.|+.++.||++|.|+++++| .+++||++|.|+++++|
T Consensus 161 ~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 205 (374)
T 2iu8_A 161 CHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVI 205 (374)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred CEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEE
Confidence 333333333334444444444444444 24555555555555555
No 102
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.37 E-value=3.4e-12 Score=132.06 Aligned_cols=108 Identities=26% Similarity=0.310 Sum_probs=61.5
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECC--------CCEECCCcEEe-
Q 007143 327 GMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWD--------NVIIEDGCELR- 395 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~--------~v~Ig~~~~I~- 395 (616)
+.+++.++.|+++|.|+++ +|+.++.||++|.|. +++||++|.||++|.|. ++.|+. +++||++|.|.
T Consensus 151 ~a~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~ 229 (316)
T 3tk8_A 151 PAIARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGA 229 (316)
T ss_dssp TCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECT
T ss_pred CeEEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECC
Confidence 3444444555555544433 444455555555554 35555555555555553 344444 45555555552
Q ss_pred ceEECCCcEECCCCEECCCCEECCCcEECCCC-------EECCCCEE
Q 007143 396 HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERF-------VVPAHSKV 435 (616)
Q Consensus 396 ~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~-------~v~~~~~v 435 (616)
+++|+.+++||++|+|++|++|+.+++|++.+ .||++++|
T Consensus 230 ~a~I~~gv~IG~g~vIgagsvV~~~t~I~d~~~~~v~~g~Vp~gsvV 276 (316)
T 3tk8_A 230 RSEVVEGVIVEENSVISMGVYLGQSTKIYDRETGEVTYGRIPAGSVV 276 (316)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred CCEEcCCCEECCCCEEcCCCEEcCCeeecccccccccccEeCCCCEE
Confidence 44556666666666666666666666666665 67777777
No 103
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.37 E-value=2.6e-12 Score=140.65 Aligned_cols=69 Identities=26% Similarity=0.283 Sum_probs=45.5
Q ss_pred ecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEe-ceEECCCCEECCCcEEe
Q 007143 325 RRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELR 395 (616)
Q Consensus 325 ~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~ 395 (616)
.+++.+++++.|++++.|+ ++.||++|.|+ ++.|.+++||++|.||++|.|. +++|++++.||++|.|.
T Consensus 290 ~~~~~ig~~~~I~~~~~i~-~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~ 359 (468)
T 1hm9_A 290 KGQTKIGAETVLTNGTYVV-DSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVK 359 (468)
T ss_dssp ESSCEECTTCEECTTCEEE-SCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEE
T ss_pred CCCCEECCCCEECCCCEEe-ccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEe
Confidence 3455566666666666653 56677777777 7777777777777777777776 66666666666555544
No 104
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.37 E-value=2.5e-12 Score=140.11 Aligned_cols=71 Identities=18% Similarity=0.248 Sum_probs=53.3
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEe-ceEECCCCEECCCcEEe
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELR 395 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~ 395 (616)
..+++.+|.++.|++++.|. ++.||++|.|++++.|.+++||++|.||++|.|. ++.|++++.||+++.|.
T Consensus 280 i~~~~~Ig~~~~I~~~~~i~-~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~ 351 (456)
T 2v0h_A 280 IEGNVKLGDRVKIGTGCVLK-NVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIK 351 (456)
T ss_dssp EEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred EcCCcEECCCCEECCCCEEE-eEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEe
Confidence 34566777777777777774 7778888888888888888888888888888876 67777776666665553
No 105
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.36 E-value=2.8e-12 Score=123.33 Aligned_cols=111 Identities=19% Similarity=0.276 Sum_probs=85.6
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
+.+.|||||+|.|+||+ .||+|+|++|+|||+|+++.|..+|+++|+|++++..+++.+++... ++.+
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~~------~~~~- 71 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMALD------GTDV- 71 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCCT------TSEE-
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhccC------CCEE-
Confidence 45889999999999996 49999999999999999999999999999999998878888777541 2333
Q ss_pred EEeCC-CccCHHHHHHHHHhcccc--c-CCEEEEeCce--ecchhHHHHHHH
Q 007143 107 TIESH-NIISAGDALRLIYEQNVI--H-GDFVLISGDT--VSNMLLTQALQE 152 (616)
Q Consensus 107 ~i~~~-~~~~~gdalr~~~~~~~i--~-~dfLlv~gD~--i~~~~l~~~l~~ 152 (616)
+..+ ...|++++++... ..+ . +.++++.||+ +....+..+++.
T Consensus 72 -~~~~~~~~g~~~~i~~al--~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 72 -VVVEDVERGCAASLRVAL--ARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp -EECC----CCHHHHHHHH--TTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred -EECCCcccCHHHHHHHHH--HHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 3332 3357888888543 334 2 2399999999 456688888876
No 106
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.36 E-value=7.5e-12 Score=124.98 Aligned_cols=90 Identities=24% Similarity=0.400 Sum_probs=61.3
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEec---------eEECCCCEECCCc
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG---------SYIWDNVIIEDGC 392 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~---------s~I~~~v~Ig~~~ 392 (616)
...+++++++++.|++++.|++++.||++|.|+.++.|+ +++||++|+||+++.|.+ ++|+++|.||.+|
T Consensus 99 ~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~ 178 (240)
T 3r8y_A 99 IIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANV 178 (240)
T ss_dssp EEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTC
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCC
Confidence 344566677777777777777777777777777777775 777888888888887765 7777777777777
Q ss_pred EE-eceEECCCcEECCCCEEC
Q 007143 393 EL-RHVIVCDGVIMKAGAVLK 412 (616)
Q Consensus 393 ~I-~~siIg~~v~Ig~~~~I~ 412 (616)
+| .++.||++++|+++++|.
T Consensus 179 ~I~~~~~Ig~~~~I~~gsvV~ 199 (240)
T 3r8y_A 179 VVLEGVTVGKGAVVAAGAVVT 199 (240)
T ss_dssp EECTTCEECTTCEECTTCEEC
T ss_pred EECCCcEECCCCEECCCCEEC
Confidence 76 444555444444444444
No 107
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.35 E-value=9.7e-12 Score=120.05 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=71.0
Q ss_pred eeecceEEcCCcEECCCCEEC---CCcEECCCCEECCCCEEe-----------------ceEECCCCEECCCCEEeceEE
Q 007143 323 LERRGMYRALEIEQSRSAQVG---SFTVIGYGTKIGSNSKIS-----------------DSVIGEGCTIGSNVLIEGSYI 382 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~---~~~~Ig~~~~Ig~~~~I~-----------------~s~IG~~~~Ig~~~~I~~s~I 382 (616)
...+++.+|+++.|++++.|. +++.||++|.|+++++|. .++||+++.|+.++.+.++.|
T Consensus 26 ~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~~I 105 (194)
T 3tv0_A 26 EIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAMKM 105 (194)
T ss_dssp EEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCSEE
T ss_pred EEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeeeee
Confidence 345677788888888888774 457889999999998884 357888888888888877766
Q ss_pred CCCCEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 383 WDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 383 ~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
++++.|+.+++| +.+++|+.+|+||.+++|..++.||++++|...|
T Consensus 106 g~~~~Ig~~~~I-----------~~gv~IG~~~~IgagsvV~~~~~Ip~~svv~G~p 151 (194)
T 3tv0_A 106 GDNNVIESKAYV-----------GRNVILTSGCIIGACCNLNTFEVIPENTVIYGAD 151 (194)
T ss_dssp CSSCEECTTCEE-----------CTTEEECSSCEECTTCEECCCEEECTTEEEESTT
T ss_pred cccceecceeeE-----------CCeEEECCCCEECCCCEECCCcEECCCCEEECCC
Confidence 666666555444 4444444455555555555555566666665533
No 108
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.35 E-value=5.5e-12 Score=121.00 Aligned_cols=99 Identities=20% Similarity=0.261 Sum_probs=71.7
Q ss_pred eeecceEEcCCcEECCCCEECC---CcEECCCCEECCCCEEece------------EECCCCEECCCCEEeceEECCCCE
Q 007143 323 LERRGMYRALEIEQSRSAQVGS---FTVIGYGTKIGSNSKISDS------------VIGEGCTIGSNVLIEGSYIWDNVI 387 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~---~~~Ig~~~~Ig~~~~I~~s------------~IG~~~~Ig~~~~I~~s~I~~~v~ 387 (616)
...+++.+++++.|++++.|.+ .+.||++|.|++++.|..+ +||++|.||.+|.|.+++|+++|.
T Consensus 33 ~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~ 112 (189)
T 3r1w_A 33 VIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVL 112 (189)
T ss_dssp EEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEE
T ss_pred EEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcE
Confidence 3456788899999999998874 4599999999999999654 999999999999999888888888
Q ss_pred ECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCC
Q 007143 388 IEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGER 426 (616)
Q Consensus 388 Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~ 426 (616)
||.++.| ..+++||++|+|+++++|.++..|+++
T Consensus 113 Ig~~~~i-----~~~v~Ig~~~~Ig~~s~V~~g~~i~~~ 146 (189)
T 3r1w_A 113 IGMKSMI-----MDGAIVEDEVIVAAGATVSPGKVLESG 146 (189)
T ss_dssp ECTTCEE-----CTTCEECSSCEECTTCEECTTCEECTT
T ss_pred ECCCCEE-----cCCCEECCCCEEccCCEECCCCEeCCC
Confidence 8777766 344444444444444333333333333
No 109
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.34 E-value=3.8e-12 Score=122.50 Aligned_cols=112 Identities=17% Similarity=0.329 Sum_probs=87.1
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
+++.|||||+|.|+||++ ||+|+|++|+|||+|+++.+..+|+++|+|++++..+++.+++... ++.+.
T Consensus 4 ~~~~~iIlA~G~~~R~g~-----~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~~------~~~~~ 72 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLGT-----PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELD------GLDIV 72 (199)
T ss_dssp CCEEEEEEESSCCTTTTS-----CGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCCT------TSEEE
T ss_pred CceEEEEECCCCCCCCCC-----CEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC------CCEEE
Confidence 458999999999999974 9999999999999999999999999999999998777888777541 34443
Q ss_pred EEeCCCccCHHHHHHHHHhcccc--cCC-EEEEeCce--ecchhHHHHHHH
Q 007143 107 TIESHNIISAGDALRLIYEQNVI--HGD-FVLISGDT--VSNMLLTQALQE 152 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i--~~d-fLlv~gD~--i~~~~l~~~l~~ 152 (616)
. ......|++++++... ..+ ..+ ++++.||+ +....+..+++.
T Consensus 73 ~-~~~~~~g~~~~i~~al--~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 73 L-VDDAGLGCSSSLKSAL--TWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp E-CCCCCTTCCCHHHHHH--HTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred E-CCCcccCHHHHHHHHH--HhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 2 2233457777777543 233 334 99999999 456788888876
No 110
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.33 E-value=5.6e-12 Score=121.41 Aligned_cols=108 Identities=24% Similarity=0.259 Sum_probs=75.4
Q ss_pred EcC-CcEECCCCEE--CCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEece-EECCCCEECCCcEEe-ceEECC
Q 007143 330 RAL-EIEQSRSAQV--GSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEGS-YIWDNVIIEDGCELR-HVIVCD 401 (616)
Q Consensus 330 ~~~-~v~i~~~~~I--~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~s-~I~~~v~Ig~~~~I~-~siIg~ 401 (616)
++. ++.|.+.+.+ +.++.||+++.|+++++|. .+.||++|.||++|.|.+. ..++......++.+. .++||+
T Consensus 60 ~~~~~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 139 (190)
T 3hjj_A 60 SADGKAQINPDFRCDYGYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGN 139 (190)
T ss_dssp ESSSCCEECSSCEESSSTTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECT
T ss_pred cCCCCcEECCCEEEEeCCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECC
Confidence 455 6777776666 6788888888888888885 6789999999999999643 333333334444432 456777
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEE----CCCCEEcc
Q 007143 402 GVIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSL 437 (616)
Q Consensus 402 ~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~ 437 (616)
+|+||.+|+|.+|++||++|+||+|++| |+++++..
T Consensus 140 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v~~G 179 (190)
T 3hjj_A 140 NVWVGGGAIINPGVSIGDNAVIASGAVVTKDVPNNVVVGG 179 (190)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEET
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECcccCCCCEEEc
Confidence 7777777777777777777777777765 44444443
No 111
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.31 E-value=1.9e-11 Score=120.32 Aligned_cols=104 Identities=14% Similarity=0.177 Sum_probs=53.5
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECCCcEEC
Q 007143 329 YRALEIEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRHVIVCDGVIMK 406 (616)
Q Consensus 329 ~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~siIg~~v~Ig 406 (616)
++..++.++++|.|+++++|++++.||++|.|. +++|+.+|.||++|.|. ++.|..+++||++|.| |.+++|.
T Consensus 107 ~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~I-----g~~~~i~ 181 (220)
T 4ea9_A 107 VVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFL-----GVGARVI 181 (220)
T ss_dssp EECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEE-----CTTCEEC
T ss_pred EECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEE-----CCCCEEc
Confidence 344444444444444444444444444444443 44444455555544443 3444455555555544 5555555
Q ss_pred CCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 407 AGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 407 ~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
.+++|+++|+||.+++|..+ +++++++...|
T Consensus 182 ~~~~Ig~~~~igagsvv~~~--v~~~~~~~G~P 212 (220)
T 4ea9_A 182 PGVTIGADTIVGAGGVVVRD--LPDSVLAIGVP 212 (220)
T ss_dssp TTCEECTTCEECTTCEECSC--BCTTCEEETTT
T ss_pred CCcEECCCCEECCCCEEccc--cCCCcEEEEeC
Confidence 55555555556666666554 56666665433
No 112
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.30 E-value=9.2e-11 Score=116.03 Aligned_cols=119 Identities=14% Similarity=0.159 Sum_probs=82.0
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHHH-HHHHHHhcCCCCCCCc
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSKQ-VIDYLENSEWFSQPNF 103 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~~-i~~~l~~~~~~~~~~~ 103 (616)
...|.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|..++ +++|+|++++.... +++++. + +.
T Consensus 11 ~~~~~aiILAaG~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~---~----~~ 80 (234)
T 1vpa_A 11 HHMNVAILLAAGKGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF---H----EK 80 (234)
T ss_dssp CCCEEEEEEECCCCGGGCC---SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC---C----TT
T ss_pred cccCeEEEEcCcchhhcCC---CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc---c----CC
Confidence 4568999999999999983 56999999999999999999999998 89999999876543 344332 1 12
Q ss_pred EEEEEeCCCccCHHHHHHHHHhc-ccccCC-EEEEeCce--ecchhHHHHHHHHHHh
Q 007143 104 TVKTIESHNIISAGDALRLIYEQ-NVIHGD-FVLISGDT--VSNMLLTQALQEHKER 156 (616)
Q Consensus 104 ~i~~i~~~~~~~~gdalr~~~~~-~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~ 156 (616)
.+...... .+..++++..... .-...+ ++++.||+ +....+..+++.|+..
T Consensus 81 ~~~~~~gg--~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 81 VLGIVEGG--DTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp EEEEEECC--SSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred ceEEeCCC--CcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 33333221 1244444432211 000235 66777998 5566899999988763
No 113
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.30 E-value=3.1e-11 Score=116.60 Aligned_cols=107 Identities=17% Similarity=0.151 Sum_probs=56.9
Q ss_pred cceEEcCCcEEC--CCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECC
Q 007143 326 RGMYRALEIEQS--RSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRHVIVCD 401 (616)
Q Consensus 326 ~~i~~~~~v~i~--~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~siIg~ 401 (616)
+..++++++.|+ +++.|+++++|+.+++||+++.|. +++|+.+|.||++|.|. ++.|..+++||++|.| +.
T Consensus 80 ~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~I-----g~ 154 (194)
T 3bfp_A 80 KSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL-----GI 154 (194)
T ss_dssp TTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE-----CT
T ss_pred CeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEE-----cC
Confidence 334444455555 555555555555555555555552 44555555555555554 3555555555555554 45
Q ss_pred CcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 402 GVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 402 ~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
++.|..+++|+++|+||.+++|..+ +++++++...|
T Consensus 155 ~~~i~~~~~Ig~~~~Igagsvv~~~--v~~~~~~~G~P 190 (194)
T 3bfp_A 155 NSCVLPNLSLADDSILGGGATLVKN--QDEKGVFVGVP 190 (194)
T ss_dssp TCEECTTCEECTTCEECTTCEECSC--BCSCCEECCCC
T ss_pred CCEECCCCEECCCCEECCCCEEccc--cCCCCEEEeec
Confidence 5555555555555555556666554 56666665543
No 114
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=1.9e-11 Score=133.43 Aligned_cols=105 Identities=15% Similarity=0.132 Sum_probs=80.4
Q ss_pred eecceEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCc
Q 007143 324 ERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGV 403 (616)
Q Consensus 324 ~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v 403 (616)
..+++.+++++.|+++|.| .++.||++|.|+++|+|.+++||++|.||.++.|.+++||++|.||.+|.|.+.. ...+
T Consensus 288 i~g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~-~~~v 365 (496)
T 3c8v_A 288 IKGDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSE-SSPL 365 (496)
T ss_dssp EESSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCS-SSCE
T ss_pred EeCCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCC-Ccce
Confidence 3467889999999999999 7899999999999999999999999999999999999999999999999996541 0113
Q ss_pred EECCCCEECCCCEEC--CCcEECCCCEEC
Q 007143 404 IMKAGAVLKPGVVLS--FKVVIGERFVVP 430 (616)
Q Consensus 404 ~Ig~~~~I~~g~vIg--~~v~Ig~~~~v~ 430 (616)
+||++|+|+.|++|. +++.|++++++.
T Consensus 366 ~IG~~a~IGagsvV~~~~~~~I~~~s~v~ 394 (496)
T 3c8v_A 366 KIGDGCVVMPHTIIDLEEPLEIPAGHLVW 394 (496)
T ss_dssp EECTTCEECTTCEEECSSCEEECSSEEEC
T ss_pred EECCCCEECCCCEEecCCCcEeCCCCEEE
Confidence 444444444444444 445555554444
No 115
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.25 E-value=6.9e-11 Score=117.57 Aligned_cols=114 Identities=17% Similarity=0.145 Sum_probs=71.7
Q ss_pred CCcccCCCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCC
Q 007143 21 PDDLARQPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQ 100 (616)
Q Consensus 21 ~~~~~~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~ 100 (616)
+++...+++.|||||+|.|+||++ . ||+|+|++|+|||+|+++. ..++++|+|++++ .+.+ +..
T Consensus 18 ~~~~~~M~~~aiILAgG~s~Rm~~---~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~---~~~~-~~~------ 81 (236)
T 2px7_A 18 DDDDKHMEVSVLIPAAGNGLRLGR---G-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP---GAEP-PKG------ 81 (236)
T ss_dssp ------CCCEEEEECCC----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT---TCCC-CTT------
T ss_pred cccccCCceEEEEEcCCCCccCCC---C-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH---HHHH-hhc------
Confidence 455566677899999999999985 4 9999999999999999999 7789999999985 1222 211
Q ss_pred CCcEEEEEeCCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHHh
Q 007143 101 PNFTVKTIESHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKER 156 (616)
Q Consensus 101 ~~~~i~~i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~~ 156 (616)
.+ +.++.. ..+...+++.... .+..+ +|++.||+ +....+..+++.+++.
T Consensus 82 ~~--v~~~~~--~~~~~~~i~~al~--~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 82 LG--AVFLEG--GATRQASVARLLE--AASLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp CS--CEEEEC--CSSHHHHHHHHHH--HCCSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred CC--cEEEeC--CCchHHHHHHHHH--HcCCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 12 344432 2345566654332 23345 88899997 4556789999988753
No 116
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.22 E-value=3.4e-11 Score=124.09 Aligned_cols=94 Identities=27% Similarity=0.393 Sum_probs=57.1
Q ss_pred CCcEECCCCEECCCcEE--CCCCEECCCCEEeceEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECCCcEECCC
Q 007143 332 LEIEQSRSAQVGSFTVI--GYGTKIGSNSKISDSVIGEGCTIGSNVLIE-GSYIWDNVIIEDGCELRHVIVCDGVIMKAG 408 (616)
Q Consensus 332 ~~v~i~~~~~I~~~~~I--g~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~ 408 (616)
.++.|++++.|+++++| |.++.||++ ++||++|.|+.+|+|+ ++.+++++.++.++. .+++||++|+||++
T Consensus 162 ~gv~I~p~a~IG~~v~I~~g~gvvIG~~-----~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~-~~~~IGd~v~IGag 235 (313)
T 3q1x_A 162 TSIDIHPGASIKGHFFIDHGVGVVIGET-----AIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTK-RHPTVGDYVTIGTG 235 (313)
T ss_dssp HCCEECTTCEECSSCEESSCTTCEECTT-----CEECSSCEECTTCEEECCCCCCTTCCCCCCSS-CSCEECSSCEECTT
T ss_pred CCeEECCCCEECCCEEECCCCceEECCC-----cEECCCCEECCCcEEeCCcEECCCceEcCCCc-cCCEECCCCEECCC
Confidence 34445555555545555 333333333 3555555666555553 345556666655542 35678888888888
Q ss_pred CEECCCCEECCCcEECCCCEECC
Q 007143 409 AVLKPGVVLSFKVVIGERFVVPA 431 (616)
Q Consensus 409 ~~I~~g~vIg~~v~Ig~~~~v~~ 431 (616)
|+|.++++||++|+||+|++|..
T Consensus 236 a~Ilggv~IG~~a~IGagsvV~~ 258 (313)
T 3q1x_A 236 AKVLGNIIVGSHVRIGANCWIDR 258 (313)
T ss_dssp CEEESSCEECSSEEECTTCEECS
T ss_pred CEECCCcEECCCCEECCCCEECC
Confidence 88887888888888887777644
No 117
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.22 E-value=3.8e-11 Score=115.40 Aligned_cols=101 Identities=23% Similarity=0.298 Sum_probs=61.5
Q ss_pred EcCCcEECCCCEE--CCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEece-EECCCCEECCCcEE-eceEECCC
Q 007143 330 RALEIEQSRSAQV--GSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEGS-YIWDNVIIEDGCEL-RHVIVCDG 402 (616)
Q Consensus 330 ~~~~v~i~~~~~I--~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~s-~I~~~v~Ig~~~~I-~~siIg~~ 402 (616)
+++++.|.+.+.+ +.++.||+++.|+.+++|. ..+||++|.||++|.|... ...+......++.+ ..++||++
T Consensus 59 ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~ 138 (188)
T 3srt_A 59 VGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDN 138 (188)
T ss_dssp CCSCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSS
T ss_pred cCCCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCC
Confidence 4455555555554 3567777777777777774 4479999999999888532 12221111122222 24555777
Q ss_pred cEECCCCEECCCCEECCCcEECCCCEEC
Q 007143 403 VIMKAGAVLKPGVVLSFKVVIGERFVVP 430 (616)
Q Consensus 403 v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~ 430 (616)
|+||.+|+|.+|++||++|+||++++|.
T Consensus 139 v~IG~~~~I~~gv~IG~~~vIgagsvV~ 166 (188)
T 3srt_A 139 VWIGGGVIITPGITIGDNVVIGAGSVVT 166 (188)
T ss_dssp CEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred cEEcCCCEECCCcEECCCCEECCCCEEC
Confidence 7777777777666666666666666643
No 118
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.20 E-value=6.8e-11 Score=114.28 Aligned_cols=76 Identities=28% Similarity=0.375 Sum_probs=64.9
Q ss_pred ceEECCCCEECCCCEEe---ceEECCCCEECCCcEEece-------------EECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIE---GSYIWDNVIIEDGCELRHV-------------IVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~---~s~I~~~v~Ig~~~~I~~s-------------iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|. ..+||++|.||++|.|... .++..++||++|+|+.+|+|.++|+||+
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGA 155 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCEECC
Confidence 45677777777777774 3489999999999999653 4778899999999999999999999999
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 156 ~~vIgagsvV~~ 167 (195)
T 3nz2_A 156 RSVVAANSVVNQ 167 (195)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEEcc
Confidence 999999999986
No 119
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.20 E-value=5.5e-11 Score=124.93 Aligned_cols=141 Identities=14% Similarity=0.158 Sum_probs=85.2
Q ss_pred ccchhhccC--hhhHHHHhhhhhcccc---ccc---cCCCcccCCCcceeeecceEEcCCcEECCCCEECCCcEECCCCE
Q 007143 282 SSYAARIDN--YRSYDIVSKDIIQRWT---YPY---VPDVKFCGNRATKLERRGMYRALEIEQSRSAQVGSFTVIGYGTK 353 (616)
Q Consensus 282 ~~y~~~V~s--~~sY~~a~~dil~r~~---~p~---~p~~~~~~~~~~~~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~ 353 (616)
..||.+.+. +..|.....++..+-. +++ .|... .|.. ...++.|++++.|++++.||++|.
T Consensus 169 ~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~-----~~v~------p~~gv~I~p~a~I~~~a~IG~gv~ 237 (387)
T 2rij_A 169 NVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFL-----AHII------PEDNTRILESSKVRMGASLAAGTT 237 (387)
T ss_dssp CEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGG-----GTCC------CCTTCEESCGGGBBTTCBCCTTCE
T ss_pred eeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchh-----cccc------CCCCEEEcCCCEECCCeEEcCCCE
Confidence 368888777 5677777666653210 110 11100 0111 112444555555555555555555
Q ss_pred ECCC-CEEe-ceE-ECCCCEECCCCEEe-ceEECCCCEECCCcEE----ec-----eEECCCcEECCCCEECCCCEECCC
Q 007143 354 IGSN-SKIS-DSV-IGEGCTIGSNVLIE-GSYIWDNVIIEDGCEL----RH-----VIVCDGVIMKAGAVLKPGVVLSFK 420 (616)
Q Consensus 354 Ig~~-~~I~-~s~-IG~~~~Ig~~~~I~-~s~I~~~v~Ig~~~~I----~~-----siIg~~v~Ig~~~~I~~g~vIg~~ 420 (616)
|+++ +.|. ++. ||+ |.|+. +|. +++||++|.|+.++.| .+ ++||++|+||.+++ +|++||++
T Consensus 238 Ig~g~a~Ig~nv~vIG~-~~I~~--~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~GV~IGdg 312 (387)
T 2rij_A 238 IMPGASYVNFNAGTTGA-CMVEG--RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--TGIPLGDN 312 (387)
T ss_dssp ECSSSCEECTTCEESSC-CEECS--EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--ECSCBCTT
T ss_pred EeCCeeEECCCcEEECC-EEEee--EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--CCcEECCC
Confidence 5553 4443 334 566 65543 443 5667777777777754 32 78899999999988 68899999
Q ss_pred cEECCCCEECCCCEEccc
Q 007143 421 VVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 421 v~Ig~~~~v~~~~~v~~~ 438 (616)
|+||+|++|.+++.+...
T Consensus 313 avIGAGsVVt~dv~i~~~ 330 (387)
T 2rij_A 313 CIVDAGIAVLEGTKFLLK 330 (387)
T ss_dssp CEECTTCEECTTCEEEEC
T ss_pred CEECCCCEECCCceeeec
Confidence 999999999988888653
No 120
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.19 E-value=6.4e-11 Score=114.86 Aligned_cols=109 Identities=20% Similarity=0.190 Sum_probs=68.6
Q ss_pred cCCcEECCCCEE--CCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEeceE-ECCCCEECCCcEE-eceEECCCc
Q 007143 331 ALEIEQSRSAQV--GSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEGSY-IWDNVIIEDGCEL-RHVIVCDGV 403 (616)
Q Consensus 331 ~~~v~i~~~~~I--~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~s~-I~~~v~Ig~~~~I-~~siIg~~v 403 (616)
+.++.|.+...+ +.++.||++|.|+++++|. .++||++|.||++|.|..+. ..+......+..+ ..++||++|
T Consensus 58 g~~~~i~~~~~~~~g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v 137 (199)
T 3ftt_A 58 TDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNT 137 (199)
T ss_dssp CSSEEECSSEEESSSTTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSE
T ss_pred CCCeEEeCCEEEEecCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCc
Confidence 444555555444 5667777777777777773 46899999999999985432 2222222222222 344567777
Q ss_pred EECCCCEECCCCEECCCcEECCCCEE----CCCCEEcccc
Q 007143 404 IMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSLLQ 439 (616)
Q Consensus 404 ~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~~~ 439 (616)
+||.+++|.+|++||++|+||+|++| |+++++...|
T Consensus 138 ~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v~~G~P 177 (199)
T 3ftt_A 138 WFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNP 177 (199)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTT
T ss_pred EEcCCCEECCCCEECCCCEECCCCEECcccCCCCEEEEEC
Confidence 77777777777777777777777764 5555555443
No 121
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.19 E-value=4.5e-11 Score=124.62 Aligned_cols=90 Identities=19% Similarity=0.161 Sum_probs=73.4
Q ss_pred ceEEcCCcEECCCCEECC-CcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcE
Q 007143 327 GMYRALEIEQSRSAQVGS-FTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVI 404 (616)
Q Consensus 327 ~i~~~~~v~i~~~~~I~~-~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~ 404 (616)
.++...+.....++.|++ ++.|++++.|++++.|. +++||++|.||++|+|.+|+|+++++|+++++|.+++|+++|.
T Consensus 46 ~i~~e~nl~~~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~ 125 (334)
T 2pig_A 46 WVDADNVLSQQGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECA 125 (334)
T ss_dssp EESSTTSBCSSSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEE
T ss_pred eEeccCCcccCCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeE
Confidence 344445666677788888 88889999999999995 7899999999999999999999999999999999888777777
Q ss_pred ECCCCEECCCCE
Q 007143 405 MKAGAVLKPGVV 416 (616)
Q Consensus 405 Ig~~~~I~~g~v 416 (616)
|+.++++.+++.
T Consensus 126 I~~~~~i~~~s~ 137 (334)
T 2pig_A 126 IYGDARVLNQSE 137 (334)
T ss_dssp ECTTCEEESSCE
T ss_pred EecCCEEeCCEE
Confidence 666665544443
No 122
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.18 E-value=9.1e-11 Score=119.02 Aligned_cols=84 Identities=18% Similarity=0.292 Sum_probs=50.0
Q ss_pred CcEECCCCEECCCcEECCCCEECCCCEEe-----ceEECCCCEECCCCEEec---------eEECCCCEECCCcEEeceE
Q 007143 333 EIEQSRSAQVGSFTVIGYGTKIGSNSKIS-----DSVIGEGCTIGSNVLIEG---------SYIWDNVIIEDGCELRHVI 398 (616)
Q Consensus 333 ~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-----~s~IG~~~~Ig~~~~I~~---------s~I~~~v~Ig~~~~I~~si 398 (616)
++.|++++.|+++++|..++.|+.+|.|. .++||++|.|++++.|.+ ++|+++|.||.|+.| ++.
T Consensus 173 gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-gVt 251 (332)
T 3fsy_A 173 GAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL-GIS 251 (332)
T ss_dssp TEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE-CSC
T ss_pred CCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE-eeE
Confidence 33333333333333333344444444431 378888888888888864 778888888888877 555
Q ss_pred ECCCcEECCCCEECCCCEE
Q 007143 399 VCDGVIMKAGAVLKPGVVL 417 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vI 417 (616)
||++|+||+|++|..+++|
T Consensus 252 IGd~~iIGAGSVVtkdt~I 270 (332)
T 3fsy_A 252 LGDDCVVEAGLYVTAGTRV 270 (332)
T ss_dssp BCSSCEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEE
Confidence 5555555555555554443
No 123
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.18 E-value=5.9e-11 Score=121.28 Aligned_cols=65 Identities=12% Similarity=0.113 Sum_probs=28.6
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCCCEECCCCEEec---------eEECCCCEECCCcEE
Q 007143 329 YRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEGCTIGSNVLIEG---------SYIWDNVIIEDGCEL 394 (616)
Q Consensus 329 ~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~---------s~I~~~v~Ig~~~~I 394 (616)
++++++.|++.+.|..++.||.+|.|..++.++ ++||++|.|+++|.|.+ ++||++|.||.|+.|
T Consensus 198 ~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI 271 (347)
T 3r5d_A 198 YIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI 271 (347)
T ss_dssp EECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE
Confidence 333333333333333333333333333333222 55555555555555543 344444444444444
No 124
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.17 E-value=1.1e-10 Score=113.33 Aligned_cols=110 Identities=20% Similarity=0.211 Sum_probs=75.3
Q ss_pred EcCCcEECCCC--EECCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEece-EECCCCEECCCcEE-eceEECCC
Q 007143 330 RALEIEQSRSA--QVGSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEGS-YIWDNVIIEDGCEL-RHVIVCDG 402 (616)
Q Consensus 330 ~~~~v~i~~~~--~I~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~s-~I~~~v~Ig~~~~I-~~siIg~~ 402 (616)
++.++.|.+.. .++.++.||+++.|+.+++|. .++||++|.||++|.|..+ ...+......+..+ ..++||++
T Consensus 58 ig~~~~I~~~~~~~~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~ 137 (203)
T 1krr_A 58 VGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNN 137 (203)
T ss_dssp CCSSCEECSCEEESCSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTT
T ss_pred cCCCcEEcCCeEEEeCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCC
Confidence 44555555553 346788888888888888885 4789999999999999643 22222222333333 45677888
Q ss_pred cEECCCCEECCCCEECCCcEECCCCEE----CCCCEEcccc
Q 007143 403 VIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSLLQ 439 (616)
Q Consensus 403 v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~~~ 439 (616)
|+||.+|+|.+|++||++|+||+|++| |+++++...|
T Consensus 138 v~IG~~a~I~~gv~IG~~~vIgagsvV~~dvp~~~vv~G~P 178 (203)
T 1krr_A 138 VWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVP 178 (203)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTT
T ss_pred eEECCCCEEeCCeEECCCCEECCCCEECCCcCCCcEEEccC
Confidence 888888888888888888888888774 5555555433
No 125
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.17 E-value=3.4e-11 Score=118.64 Aligned_cols=109 Identities=16% Similarity=0.070 Sum_probs=63.3
Q ss_pred eEEcCCcEECCCCEEC-CCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCc-------------
Q 007143 328 MYRALEIEQSRSAQVG-SFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGC------------- 392 (616)
Q Consensus 328 i~~~~~v~i~~~~~I~-~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~------------- 392 (616)
+.+++++.|++++.|+ .+..+.++|.|++++.|+ +++||++|.|+++|+|.. ++.++.+...+
T Consensus 30 ~v~~~~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i~~--~g~~~~~~~~~~~~~~~~~~~~~~ 107 (220)
T 4hur_A 30 TITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIM--NGANHRMDGSTYPFHLFRMGWEKY 107 (220)
T ss_dssp GCCSTTEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEEC--GGGCCCCSSCCCCGGGGCTTGGGG
T ss_pred eEECCCEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCCEEEE--CCCCcccCCcceeeeeeccccccc
Confidence 3344444444444442 122233467777777775 467888888888887620 12222222211
Q ss_pred --------EEeceEECCCcEECCCCEECCCCEECCCcEECCCCEE----CCCCEEccc
Q 007143 393 --------ELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSLL 438 (616)
Q Consensus 393 --------~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~~ 438 (616)
...+++||++|+||.+|+|.+|++||++|+||++++| ++++++...
T Consensus 108 ~~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~~~vv~G~ 165 (220)
T 4hur_A 108 MPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGN 165 (220)
T ss_dssp CCCGGGSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETT
T ss_pred ccccccccccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccCCCCcEEeCC
Confidence 1234667778888887777777777777777777775 455555543
No 126
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.17 E-value=2.1e-10 Score=110.25 Aligned_cols=76 Identities=17% Similarity=0.199 Sum_probs=66.5
Q ss_pred ceEECCCCEECCCCEEe---ceEECCCCEECCCcEEec-------------eEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIE---GSYIWDNVIIEDGCELRH-------------VIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~---~s~I~~~v~Ig~~~~I~~-------------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|. ...||++|.|+++|.|.. +.++..++||++|+|+.+|+|.+||+||+
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 157 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGD 157 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEECT
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEECC
Confidence 56778888888888885 568999999999999943 56678899999999999999999999999
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 158 ~~vIgagsvV~~ 169 (190)
T 3hjj_A 158 NAVIASGAVVTK 169 (190)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEECc
Confidence 999999999985
No 127
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.15 E-value=1.3e-10 Score=116.93 Aligned_cols=107 Identities=19% Similarity=0.270 Sum_probs=81.8
Q ss_pred cceEEcCCcEECCCCEEC--CCcEECCCCEECCCCEEe----ceEECCCCEECCCCEEece--------------EECCC
Q 007143 326 RGMYRALEIEQSRSAQVG--SFTVIGYGTKIGSNSKIS----DSVIGEGCTIGSNVLIEGS--------------YIWDN 385 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I~--~~~~Ig~~~~Ig~~~~I~----~s~IG~~~~Ig~~~~I~~s--------------~I~~~ 385 (616)
+.+++++++.|.+++.|. .++.||++|.|++++.|. +++||++|.||++|.|.++ .+..+
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 163 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD 163 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence 457788888888888884 478999999999999997 8999999999999999764 23333
Q ss_pred CEECCCcEEeceEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 386 VIIEDGCELRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 386 v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
++||++|.| |.++.|.++++|+++|+||.+++|..+ ||+++++...|
T Consensus 164 v~Igd~v~I-----G~~a~I~~gv~IG~~~~IgagsvV~~~--vp~~~~~~G~P 210 (252)
T 3jqy_B 164 IIISSYVWV-----GRNVSIMKGVSVGSGSVIGYGSIVTKD--VPSMCAAAGNP 210 (252)
T ss_dssp EEECSSCEE-----CSSEEECTTCEECTTCEECTTCEECSC--BCTTEEEEETT
T ss_pred eEEecCcEE-----CCCCEECCCCEECCCCEECCCCEECcc--cCCCCEEEccC
Confidence 455555554 666666777777777777777777765 78888886644
No 128
>3jui_A Translation initiation factor EIF-2B subunit EPSI; heat repeat, guanine nucleotide exchange factor, disease mutation, leukodystrophy; 2.00A {Homo sapiens} SCOP: a.118.1.0
Probab=99.15 E-value=2.2e-12 Score=123.01 Aligned_cols=49 Identities=35% Similarity=0.531 Sum_probs=46.7
Q ss_pred CchhhHHHHHHHHHHHHHHcCCCCCcEEEeecccccccCCChHHhhccc
Q 007143 561 DDSVYFEKEVEATFLRAVEENVKVDHVILEVNSLRGSLDFTCSLLMRLE 609 (616)
Q Consensus 561 ~d~~~F~~e~~~~l~r~~~~~~~~d~~~lEin~lr~a~n~~~~~v~~~~ 609 (616)
||.+.|++||++||+||+++|+++||++|||||||||||+|++||||+.
T Consensus 9 ~~~~~F~~Ev~~sl~ra~~e~~~~d~~~LEinslr~a~N~s~~eV~~av 57 (182)
T 3jui_A 9 DDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVMQVL 57 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999975
No 129
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.14 E-value=1.1e-10 Score=111.56 Aligned_cols=105 Identities=24% Similarity=0.278 Sum_probs=63.8
Q ss_pred CcEECCC--CEECCCcEECCCCEECCCCEEe---ceEECCCCEECCCCEEeceEEC-CCCEECCCcE-EeceEECCCcEE
Q 007143 333 EIEQSRS--AQVGSFTVIGYGTKIGSNSKIS---DSVIGEGCTIGSNVLIEGSYIW-DNVIIEDGCE-LRHVIVCDGVIM 405 (616)
Q Consensus 333 ~v~i~~~--~~I~~~~~Ig~~~~Ig~~~~I~---~s~IG~~~~Ig~~~~I~~s~I~-~~v~Ig~~~~-I~~siIg~~v~I 405 (616)
++.|.+. +.++.++.||+++.|+++++|. .++||++|.||++|.|...... +...-..+.. -.+++||++|+|
T Consensus 58 ~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~I 137 (182)
T 1ocx_A 58 EAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWI 137 (182)
T ss_dssp SEEECSCEEESSSTTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEE
T ss_pred CEEEeCCEEEEeCCCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEE
Confidence 4445554 3345677777777777777773 6789999999999998643110 0000001111 234556777777
Q ss_pred CCCCEECCCCEECCCcEECCCCEE----CCCCEEcc
Q 007143 406 KAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSL 437 (616)
Q Consensus 406 g~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~ 437 (616)
|.+++|.+|++||++|+||+|++| |+++++..
T Consensus 138 g~~a~I~~gv~IG~~~vIgagsvV~~dip~~~vv~G 173 (182)
T 1ocx_A 138 GGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGG 173 (182)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSCBCSSEEEET
T ss_pred CCCCEECCCcEECCCCEECCCCEECCcCCCCcEEEc
Confidence 777777777777777777777664 44555444
No 130
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.14 E-value=1e-10 Score=112.10 Aligned_cols=107 Identities=25% Similarity=0.298 Sum_probs=64.9
Q ss_pred cCCcEECCC--CEECCCcEECCCCEECCCCEE---eceEECCCCEECCCCEEeceEE-CCCCEECCCcE-EeceEECCCc
Q 007143 331 ALEIEQSRS--AQVGSFTVIGYGTKIGSNSKI---SDSVIGEGCTIGSNVLIEGSYI-WDNVIIEDGCE-LRHVIVCDGV 403 (616)
Q Consensus 331 ~~~v~i~~~--~~I~~~~~Ig~~~~Ig~~~~I---~~s~IG~~~~Ig~~~~I~~s~I-~~~v~Ig~~~~-I~~siIg~~v 403 (616)
+.++.|.+. +.++.++.||+++.|+++++| .+++||++|.||++|.|..... .+......+.. -..++||++|
T Consensus 58 g~~~~I~~p~~~~~g~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v 137 (185)
T 2p2o_A 58 GERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNV 137 (185)
T ss_dssp CSCEEECSCEEESCSTTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSC
T ss_pred CCCcEEeccEEEEecCCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCe
Confidence 334444443 334567777778888777777 4678999999999999964311 00000001111 2345567777
Q ss_pred EECCCCEECCCCEECCCcEECCCCEE----CCCCEEcc
Q 007143 404 IMKAGAVLKPGVVLSFKVVIGERFVV----PAHSKVSL 437 (616)
Q Consensus 404 ~Ig~~~~I~~g~vIg~~v~Ig~~~~v----~~~~~v~~ 437 (616)
+||.+|+|.+|++||++|+||+|++| |+++++..
T Consensus 138 ~IG~~~~I~~gv~IG~~~vIgagsvV~~~vp~~~vv~G 175 (185)
T 2p2o_A 138 WIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGG 175 (185)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCCCCcEEEc
Confidence 77777777777777777777777664 44445443
No 131
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.14 E-value=6.2e-11 Score=129.31 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=97.6
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeC-CeehHHHHHHHHHHCCCc-----EEEEEcCCc-HHHHHHHHH-hcCCC-
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLV-NVPMINYTLAWLEAAGVA-----EVFVFCCAH-SKQVIDYLE-NSEWF- 98 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~-g~PlI~y~Le~L~~~Gv~-----eI~vv~~~~-~~~i~~~l~-~~~~~- 98 (616)
++.+||||||.||||+ ...||+|+||+ |+|+|+++++.|...|.. .++|+++.. .+.+++|++ +..+.
T Consensus 75 k~avViLAGGlGTRLg---~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~fG 151 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMG---LCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWLY 151 (505)
T ss_dssp TEEEEEEECCCCGGGT---CCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHHHH
T ss_pred cceEEEEcCCcccccC---CCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhccC
Confidence 5789999999999999 57899999999 999999999999998644 566777654 788999998 53321
Q ss_pred CCCCcEEEEE--------e---------------CCCccCHHHHHHHHHhcc----cc---cCCEEEEeCceecc-hhHH
Q 007143 99 SQPNFTVKTI--------E---------------SHNIISAGDALRLIYEQN----VI---HGDFVLISGDTVSN-MLLT 147 (616)
Q Consensus 99 ~~~~~~i~~i--------~---------------~~~~~~~gdalr~~~~~~----~i---~~dfLlv~gD~i~~-~~l~ 147 (616)
..+ -+|.+. . ...+.|+|++++.+.... ++ ...|+|.++|.++. .|+
T Consensus 152 l~~-~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~- 229 (505)
T 2oeg_A 152 QVF-DSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK- 229 (505)
T ss_dssp TTC-CCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-
T ss_pred CCc-cceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-
Confidence 100 012211 1 112359999998663222 22 13399999999874 467
Q ss_pred HHHHHHHHhhccCCCceEEEEEecCC
Q 007143 148 QALQEHKERKKKDNNAVMTMIIKKSK 173 (616)
Q Consensus 148 ~~l~~h~~~~~~d~~a~mT~v~~~~~ 173 (616)
.++..|.++ ++.+||.+.+..
T Consensus 230 ~llg~~~~~-----~ad~~~~v~~k~ 250 (505)
T 2oeg_A 230 RVLAYMEKE-----KIDFLMEVCRRT 250 (505)
T ss_dssp HHHHHHHHH-----TCSEEEEEEECC
T ss_pred HHHHHHHhc-----CCcEEEEEEEec
Confidence 888999886 478888777654
No 132
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.14 E-value=1.2e-10 Score=113.03 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=65.1
Q ss_pred ceEECCCCEECCCCEEe---ceEECCCCEECCCcEEec-------------eEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIE---GSYIWDNVIIEDGCELRH-------------VIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~---~s~I~~~v~Ig~~~~I~~-------------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|. ..+||++|.||++|.|.. ..++..++||++|+|+.+|+|.+||+||+
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 153 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGE 153 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEECT
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEECC
Confidence 45677777777777774 358999999999999954 35788999999999999999999999999
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 154 ~~vIgagsvV~~ 165 (199)
T 3ftt_A 154 GSVIGAGSVVTK 165 (199)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEECc
Confidence 999999999986
No 133
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.13 E-value=6.5e-11 Score=114.41 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=80.3
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
.+.|||||+|.|+||++ ||+|+|++|+|||+|+++.|..+ +++|++++..+.+.+++.. ++ +
T Consensus 2 ~~~~iIlAgG~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~~-------~~---~ 63 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLMD-------QI---V 63 (197)
T ss_dssp CEEEEEECSCCTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTHHHHGGGCTT-------SC---E
T ss_pred ceEEEEECCcCcccCCC-----CeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCHHHHHHHhcC-------CE---E
Confidence 47899999999999985 99999999999999999999877 8888998876666655431 33 4
Q ss_pred EeCCC-ccCHHHHHHHHHhcccccC-C-EEEEeCce--ecchhHHHHHHHH
Q 007143 108 IESHN-IISAGDALRLIYEQNVIHG-D-FVLISGDT--VSNMLLTQALQEH 153 (616)
Q Consensus 108 i~~~~-~~~~gdalr~~~~~~~i~~-d-fLlv~gD~--i~~~~l~~~l~~h 153 (616)
+..+. ..|++++++... ..+.+ + |+++.||+ +....+..+++.+
T Consensus 64 v~~~~~~~G~~~si~~al--~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 64 IYNPFWNEGISTSLKLGL--RFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp EECTTGGGCHHHHHHHHH--HHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred EECCCCCCCHHHHHHHHH--HhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 44333 368888877543 23433 4 99999999 4455788888765
No 134
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.13 E-value=6.3e-11 Score=117.56 Aligned_cols=116 Identities=14% Similarity=0.122 Sum_probs=83.7
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEE
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHSKQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i 105 (616)
+.+.|||||+|.|+||+ ...||+|+|++|+|||+|+++.|..++ +++|+|++++..+.+.+ +.. +.. ..+
T Consensus 6 ~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~--~~~---~~v 76 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL--ANH---PQI 76 (236)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG--GGC---TTE
T ss_pred CceeEEEECCcCccccC---CCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh--cCC---CCE
Confidence 45899999999999998 256999999999999999999999987 89999999876554544 322 100 134
Q ss_pred EEEeCCCccCHHHHHHHHHhccccc-CC-EEEEeCce--ecchhHHHHHHHHHH
Q 007143 106 KTIESHNIISAGDALRLIYEQNVIH-GD-FVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i~-~d-fLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
.++... .|..++++... ..+. .+ ||++.||+ +....+..+++.|++
T Consensus 77 ~~~~~~--~g~~~~i~~al--~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~ 126 (236)
T 1i52_A 77 TVVDGG--DERADSVLAGL--KAAGDAQWVLVHDAARPCLHQDDLARLLALSET 126 (236)
T ss_dssp EEEECC--SSHHHHHHHHH--HTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGT
T ss_pred EEECCC--CCHHHHHHHHH--HhcCCCCEEEEEcCccccCCHHHHHHHHHHHHh
Confidence 445432 46667766533 2343 34 89999998 445578888887654
No 135
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.12 E-value=3.3e-10 Score=109.99 Aligned_cols=76 Identities=25% Similarity=0.238 Sum_probs=66.6
Q ss_pred ceEECCCCEECCCCEEec---eEECCCCEECCCcEEece-------------EECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIEG---SYIWDNVIIEDGCELRHV-------------IVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~~---s~I~~~v~Ig~~~~I~~s-------------iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|.+ .+||++|.|+.+|.|..+ .++..++||++|+|+.+|+|.+||+||+
T Consensus 75 ~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~ 154 (203)
T 1krr_A 75 NIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGD 154 (203)
T ss_dssp TEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEECC
Confidence 567888888888888863 789999999999998643 3677899999999999999999999999
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 155 ~~vIgagsvV~~ 166 (203)
T 1krr_A 155 NSVIGAGSIVTK 166 (203)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEECC
Confidence 999999999976
No 136
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.11 E-value=3.6e-10 Score=124.92 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=69.6
Q ss_pred eeecceEEcCCcEECCCCEECCCcEECCCCEECCCCE---------------------------------Ee-ceEECCC
Q 007143 323 LERRGMYRALEIEQSRSAQVGSFTVIGYGTKIGSNSK---------------------------------IS-DSVIGEG 368 (616)
Q Consensus 323 ~~~~~i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~---------------------------------I~-~s~IG~~ 368 (616)
+....+.+++++.|.+++.+.+++.|+.+|.|++++. ++ +++||++
T Consensus 279 ~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~ 358 (501)
T 3st8_A 279 WIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGAD 358 (501)
T ss_dssp EECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTT
T ss_pred cccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccc
Confidence 3445556666666666666655565555555554443 32 4566666
Q ss_pred CEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECCCCEECC-------CCEECCCcEECCCCEECCCCEE
Q 007143 369 CTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKAGAVLKP-------GVVLSFKVVIGERFVVPAHSKV 435 (616)
Q Consensus 369 ~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~-------g~vIg~~v~Ig~~~~v~~~~~v 435 (616)
|.||.+|.|.+++|++++.|+..+.|.+++||.+|.||+++++-. +++||++|.||.++.|.++.+|
T Consensus 359 v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~I 432 (501)
T 3st8_A 359 GKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTI 432 (501)
T ss_dssp CEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEE
T ss_pred cccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEE
Confidence 666666667778888888888888888888888888888765421 2455555555544443333333
No 137
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.10 E-value=1.2e-10 Score=120.03 Aligned_cols=86 Identities=20% Similarity=0.162 Sum_probs=59.4
Q ss_pred cceEEcCCcEECCCCEE--CCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEec-----eEECCCCEECCCcEEe-c
Q 007143 326 RGMYRALEIEQSRSAQV--GSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG-----SYIWDNVIIEDGCELR-H 396 (616)
Q Consensus 326 ~~i~~~~~v~i~~~~~I--~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~-----s~I~~~v~Ig~~~~I~-~ 396 (616)
.++.+++++.|++++.| +.+++||++|.||++|.|. +++||.++.|++++.+.. ++|+++|.||.+|+|. +
T Consensus 162 ~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilgg 241 (313)
T 3q1x_A 162 TSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGN 241 (313)
T ss_dssp HCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESS
T ss_pred CCeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCC
Confidence 46778888888888888 5678888888888888885 677888888877777743 4777777777777662 2
Q ss_pred eEECCCcEECCCCEE
Q 007143 397 VIVCDGVIMKAGAVL 411 (616)
Q Consensus 397 siIg~~v~Ig~~~~I 411 (616)
+.||++|+||++++|
T Consensus 242 v~IG~~a~IGagsvV 256 (313)
T 3q1x_A 242 IIVGSHVRIGANCWI 256 (313)
T ss_dssp CEECSSEEECTTCEE
T ss_pred cEECCCCEECCCCEE
Confidence 333333333333333
No 138
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.10 E-value=2.3e-10 Score=110.97 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=79.2
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
++.+||||+|.|+||+ ..||+|+|++|+|||+|+++.|.. ++++|+|++++..+.+. . + ++. +
T Consensus 6 ~~~~iILAgG~s~Rmg----~~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~--~----~~~--~ 68 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG----GVDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQEIYQ----A--S----GLK--V 68 (201)
T ss_dssp SEEEEEECCCCCSSSC----SSCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T--T----SCC--E
T ss_pred cceEEEEcCCCCCcCC----CCCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h--c----CCe--E
Confidence 4899999999999998 259999999999999999999985 58999999987654332 1 1 233 3
Q ss_pred EeCCCc--cCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHH
Q 007143 108 IESHNI--ISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQE 152 (616)
Q Consensus 108 i~~~~~--~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~ 152 (616)
+..... .|.+.+++.... .+..+ ||++.||+ +....+..+++.
T Consensus 69 v~~~~~~~~G~~~si~~~l~--~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 69 IEDSLADYPGPLAGMLSVMQ--QEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp ECCCTTCCCSHHHHHHHHHH--HCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred EecCCCCCCCHHHHHHHHHH--hCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 433322 577887775432 34445 99999999 556678888765
No 139
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.09 E-value=1.3e-09 Score=115.49 Aligned_cols=198 Identities=11% Similarity=0.126 Sum_probs=130.6
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCccccee---CCeehHHHHHHHHHH-------------CCCcEEEEEcCCcHHHHH
Q 007143 26 RQPLQAILLADSFTTKFRPITLERPKVLLPL---VNVPMINYTLAWLEA-------------AGVAEVFVFCCAHSKQVI 89 (616)
Q Consensus 26 ~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi---~g~PlI~y~Le~L~~-------------~Gv~eI~vv~~~~~~~i~ 89 (616)
+.++.+|+||+|.||||+. ..||+|+|| .|+|+++++++.+.+ .++.-++....+..+.++
T Consensus 33 ~gkvavvlLAGG~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 33 QGKTALITPAGGQGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TTCEEEEEECCSBCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred cCceEEEEecCCCcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 3468999999999999965 789999999 899999999999864 466654444445688999
Q ss_pred HHHHhcCCCCCCCcEEEEEe---------------------CCCccCHHHHHHHHHhccccc-----C-C-EEEEeCce-
Q 007143 90 DYLENSEWFSQPNFTVKTIE---------------------SHNIISAGDALRLIYEQNVIH-----G-D-FVLISGDT- 140 (616)
Q Consensus 90 ~~l~~~~~~~~~~~~i~~i~---------------------~~~~~~~gdalr~~~~~~~i~-----~-d-fLlv~gD~- 140 (616)
+|+++..|.....-+|.++. ...+.|.|++.+.+....++. + . +++.++|.
T Consensus 110 ~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~ 189 (405)
T 3oc9_A 110 NYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNI 189 (405)
T ss_dssp HHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBT
T ss_pred HHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCc
Confidence 99988554322111244332 223468999999776544432 2 3 66666699
Q ss_pred ecchhHHHHHHHHHHhhccCCCceEEEEEecCCCCCCCcccccCCCceEEEEeCCCCeEEEeeecCCCCCcceEeehHhh
Q 007143 141 VSNMLLTQALQEHKERKKKDNNAVMTMIIKKSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTICLDKMLL 220 (616)
Q Consensus 141 i~~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~~~~~~~~~~r~~~~~~vv~id~~~~rvl~~~e~p~~~~~~~~l~~~l~ 220 (616)
+.......++..|.++ ++.+++-+.+.... ..+.| ++.......+|+.|.+.|.. ...-.
T Consensus 190 L~~~~Dp~~lg~~~~~-----~~d~~~kvv~k~~~----dek~G----vl~~~dg~~~vvEysei~~e-~e~~~------ 249 (405)
T 3oc9_A 190 LCKDVDPNMIGYMDLL-----QSEICIKIVKKGFK----EEKVG----VLVKEQERIKVVEYTELTDE-LNKQL------ 249 (405)
T ss_dssp TCCSSCHHHHHHHHHT-----TCSEEEEEEECCST----TCSCC----EEEEETTEEEEECGGGCCTT-TTCBC------
T ss_pred ccccCCHHHHHHHHHc-----CCCEEEEEEECCCC----CCccc----eEEEECCeeEEEEEeeCCHH-HhhcC------
Confidence 8888888899999985 47777666554310 13555 55543335689999998763 11000
Q ss_pred hcCCceEEEeccccceeEeeCHhHHhhhh
Q 007143 221 AENPSISLHNDKQDCYIDICSPEVLSLFT 249 (616)
Q Consensus 221 ~~~~~~~ir~dl~d~gIyIcsp~vl~lf~ 249 (616)
+.-....+..+.++++|+.++|..+.
T Consensus 250 ---~~g~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 250 ---SNGEFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp ---TTSCBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ---CCCceeeccceeEeeecCHHHHHHhh
Confidence 00011233445678889998887654
No 140
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.09 E-value=1.5e-10 Score=126.18 Aligned_cols=100 Identities=20% Similarity=0.234 Sum_probs=72.0
Q ss_pred eEEcCCcEECCCCEECCCcEECCCCEECCCCEEeceEECCC-------------------CEECCCCEEeceEECCCCEE
Q 007143 328 MYRALEIEQSRSAQVGSFTVIGYGTKIGSNSKISDSVIGEG-------------------CTIGSNVLIEGSYIWDNVII 388 (616)
Q Consensus 328 i~~~~~v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~~s~IG~~-------------------~~Ig~~~~I~~s~I~~~v~I 388 (616)
+++++++.|+. +.|. ++.||++|.||++++|.++++..+ |.||.+|.|.+++|+++|.|
T Consensus 331 ~~Ig~~~~I~~-~~i~-~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~I 408 (451)
T 1yp2_A 331 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARI 408 (451)
T ss_dssp EEECTTCEEEE-EEEE-SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEE
T ss_pred eEECCCCEEcc-eEEe-ccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEE
Confidence 55555555554 5554 899999999999999987776656 99999999999999999999
Q ss_pred CCCcEEec-eEECCCcEECCCCEECCCCEECCCcEECCCCEECCCCE
Q 007143 389 EDGCELRH-VIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSK 434 (616)
Q Consensus 389 g~~~~I~~-siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~ 434 (616)
|++|+|.+ +.+..+.+||++++|+.|+ |+||++++|++|++
T Consensus 409 G~~~~i~~~~~~~~~~~ig~~~~ig~~~-----v~Ig~~a~i~agsv 450 (451)
T 1yp2_A 409 GDNVKIINKDNVQEAARETDGYFIKSGI-----VTVIKDALIPSGII 450 (451)
T ss_dssp CTTCEECCSSCCSCEEEGGGTEEEETTE-----EEECTTCEECTTCB
T ss_pred CCCCEEeCCcccccCceeCCCEEEcCCE-----EEECCCcEECCCcc
Confidence 99999965 3444444566666666553 44555555555544
No 141
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.08 E-value=2.3e-10 Score=123.62 Aligned_cols=88 Identities=24% Similarity=0.312 Sum_probs=72.8
Q ss_pred ECCCcEECCCCEECC-----CCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECCCCEECCCCE
Q 007143 342 VGSFTVIGYGTKIGS-----NSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKAGAVLKPGVV 416 (616)
Q Consensus 342 I~~~~~Ig~~~~Ig~-----~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~~g~v 416 (616)
|...+.+.+.+.|++ ++.+.++.||++|.| .++.|.+++|+++|+||.+|.|.+|+|+++|+||++|+|. +|+
T Consensus 299 i~~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~-~~~ 376 (420)
T 3brk_X 299 IWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLS-NVV 376 (420)
T ss_dssp CCCCCCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEE-EEE
T ss_pred eeeccccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEe-ceE
Confidence 333444455555554 788889999999999 8999999999999999999999999999999999999998 477
Q ss_pred ECCCcEECCCCEECC
Q 007143 417 LSFKVVIGERFVVPA 431 (616)
Q Consensus 417 Ig~~v~Ig~~~~v~~ 431 (616)
||++|+||+|++|..
T Consensus 377 ig~~~~i~~~~~i~~ 391 (420)
T 3brk_X 377 IDHGVVIPEGLIVGE 391 (420)
T ss_dssp ECTTCEECTTCEESS
T ss_pred ECCCCEECCCCEEeC
Confidence 888877777776664
No 142
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.05 E-value=6.7e-10 Score=106.35 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=57.2
Q ss_pred ceEECCCCEECCCCEE---eceEECCCCEECCCcEEec-------------eEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLI---EGSYIWDNVIIEDGCELRH-------------VIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I---~~s~I~~~v~Ig~~~~I~~-------------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+| .+.+||++|.|+.+|.|.. ..++..++||++|+|+++|+|..+|+||+
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG~ 153 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGD 153 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEECT
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEECC
Confidence 4566667777777766 3567888888888888853 33566788888888888888888888888
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 154 ~~vIgagsvV~~ 165 (185)
T 2p2o_A 154 NAVIASGAVVTK 165 (185)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEECC
Confidence 888888888865
No 143
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.05 E-value=6.9e-10 Score=111.86 Aligned_cols=94 Identities=22% Similarity=0.261 Sum_probs=51.6
Q ss_pred cEECCCCEECCCcEECCCCEECCCCEEe-ceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECCCCEEC
Q 007143 334 IEQSRSAQVGSFTVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKAGAVLK 412 (616)
Q Consensus 334 v~i~~~~~I~~~~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I~ 412 (616)
+.|++++.||++++|+.+ .+++|+ +++||++|.|+++++|.++... ....+++||++|+||.+++|.
T Consensus 138 ~~I~p~a~IG~g~~I~~~----~~vvIG~~~~IG~~v~I~~gvtig~~~~~--------~~~~~~~IGd~v~IGaga~Il 205 (267)
T 1ssq_A 138 VDIHPAAKIGHGIMFDHA----TGIVVGETSVIENDVSILQGVTLGGTGKE--------SGDRHPKVREGVMIGAGAKIL 205 (267)
T ss_dssp CEECTTCEECSSCEESSC----TTCEECTTCEECTTCEECTTCEEECCSSS--------CSSCSCEECTTCEECTTCEEE
T ss_pred eEeCCCCEECCCEEECCC----CceEECCeeEECCCCEEcCCcEECCCccc--------CCCCCeEECCCeEEcCCCEEe
Confidence 444444444444444431 123332 3456666666666666543110 011345667777777777777
Q ss_pred CCCEECCCcEECCCCE----ECCCCEEcccc
Q 007143 413 PGVVLSFKVVIGERFV----VPAHSKVSLLQ 439 (616)
Q Consensus 413 ~g~vIg~~v~Ig~~~~----v~~~~~v~~~~ 439 (616)
+|++||++|+||+|++ ||+++++...|
T Consensus 206 ~gv~IG~~a~IGagsvV~~dVp~~~~v~G~P 236 (267)
T 1ssq_A 206 GNIEVGKYAKIGANSVVLNPVPEYATAAGVP 236 (267)
T ss_dssp SSCEECTTCEECTTCEECSCBCTTCEEETTT
T ss_pred CCcEECCCCEECCCCEEccCCCCCCEEEecC
Confidence 7777777777777776 45666665543
No 144
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.04 E-value=7e-10 Score=105.93 Aligned_cols=76 Identities=17% Similarity=0.220 Sum_probs=63.5
Q ss_pred ceEECCCCEECCCCEEe---ceEECCCCEECCCcEEec-------------eEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIE---GSYIWDNVIIEDGCELRH-------------VIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~---~s~I~~~v~Ig~~~~I~~-------------siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|. ..+||++|.|+.+|.|.. ..++.+++||++|+|+.+|+|..+|+||+
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~ 151 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGD 151 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEECC
Confidence 45677777777777774 578999999999999853 34577899999999999999999999999
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|..
T Consensus 152 ~~vIgagsvV~~ 163 (182)
T 1ocx_A 152 NVVVASGAVVTK 163 (182)
T ss_dssp TCEECTTCEECS
T ss_pred CCEECCCCEECC
Confidence 999999999975
No 145
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.04 E-value=9.6e-10 Score=112.97 Aligned_cols=45 Identities=29% Similarity=0.386 Sum_probs=32.7
Q ss_pred eceEECCCcEECCCCEECCCCEECCCcEECCCCE----ECCCCEEcccc
Q 007143 395 RHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFV----VPAHSKVSLLQ 439 (616)
Q Consensus 395 ~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~----v~~~~~v~~~~ 439 (616)
.+++||++|+||++|+|.+|++||++|+||+|++ ||+++++...|
T Consensus 250 ~~~~IGd~V~IGaga~Il~gv~IGd~a~IGagsvV~~dVp~~svv~GnP 298 (310)
T 3f1x_A 250 RHPILEDDVIVYSNATILGRVTIGKGATVGGNIWVTENVPAGSRIVQRK 298 (310)
T ss_dssp CSCEECTTCEECTTCEEESSCEECTTCEECSSCEECSCBCTTCEECCCC
T ss_pred CCCEECCCcEEcCCCEECCCcEECCCCEECCCCEECCccCCCcEEECCC
Confidence 3456777788888888777777777777777776 46777776654
No 146
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.03 E-value=1.6e-09 Score=103.97 Aligned_cols=76 Identities=20% Similarity=0.260 Sum_probs=54.7
Q ss_pred ceEECCCCEECCCCEEec---eEECCCCEECCCcEEe-------------ceEECCCcEECCCCEECCCCEECCCcEECC
Q 007143 362 DSVIGEGCTIGSNVLIEG---SYIWDNVIIEDGCELR-------------HVIVCDGVIMKAGAVLKPGVVLSFKVVIGE 425 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~~---s~I~~~v~Ig~~~~I~-------------~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~ 425 (616)
++.||++|.|+.+|+|.+ ..||++|.|+.+|.|. +..++..++||++|+|+.+|+|.++|+||+
T Consensus 76 ~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGD 155 (188)
T ss_dssp TEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECS
T ss_pred CeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECC
Confidence 456666666666666642 3677777777777773 345567778888888888888888888888
Q ss_pred CCEECCCCEEcc
Q 007143 426 RFVVPAHSKVSL 437 (616)
Q Consensus 426 ~~~v~~~~~v~~ 437 (616)
+++|++|++|+.
T Consensus 156 ~~vIgagsvV~~ 167 (188)
T 3srt_A 156 NVVIGAGSVVTK 167 (188)
T ss_dssp SEEECTTCEECS
T ss_pred CCEECCCCEECc
Confidence 888888887775
No 147
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.01 E-value=9.9e-10 Score=111.71 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=25.1
Q ss_pred cCCEE--EEeCceecchhHHHHHHHHHHhh
Q 007143 130 HGDFV--LISGDTVSNMLLTQALQEHKERK 157 (616)
Q Consensus 130 ~~dfL--lv~gD~i~~~~l~~~l~~h~~~~ 157 (616)
.+++| ++++|++...+|.++|.+|..++
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 45699 99999999999999999999875
No 148
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.01 E-value=3.1e-10 Score=109.94 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=76.6
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKT 107 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~ 107 (616)
.+.|||||+|.|+||+ .||+|+|++|+|||+|+++.|..+ +++|+|++++... +++. + +.+
T Consensus 14 ~~~~iILA~G~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~--------~--~~~ 74 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG-----EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK---FSFL--------N--APV 74 (201)
T ss_dssp CCEEEEEEESSCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG--------T--CCE
T ss_pred CceEEEECCCCCccCC-----CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC--------C--ceE
Confidence 3689999999999998 499999999999999999999998 9999999987643 2221 1 234
Q ss_pred EeC-CCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHH-HH
Q 007143 108 IES-HNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQ-AL 150 (616)
Q Consensus 108 i~~-~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~-~l 150 (616)
+.. ....|++++++.... .+..+ |++++||+ +....+.. ++
T Consensus 75 v~~~~~~~g~~~~i~~al~--~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VLDEFEESASIIGLYTALK--HAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EECCCSSCCHHHHHHHHHH--HCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EecCCCCCCcHHHHHHHHH--HcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 443 345688888886432 34444 99999999 34445666 55
No 149
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.01 E-value=1e-09 Score=111.45 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=25.2
Q ss_pred ceEECCCcEECCCCEECCCCEECCCcEECCCCEEC
Q 007143 396 HVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVP 430 (616)
Q Consensus 396 ~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~ 430 (616)
+++||++|+||++++|.+|++||++|+||+|++|.
T Consensus 216 ~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~ 250 (287)
T 3mc4_A 216 HPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVL 250 (287)
T ss_dssp SCEECTTCEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred CCEECCCCEECCCCEECCCcEECCCCEECCCCEEc
Confidence 45667777777777777777777777777777643
No 150
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.01 E-value=9.4e-10 Score=113.07 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=31.6
Q ss_pred ECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 399 VCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
+..+++||++|+|++||+|..+++||++++|++|++|..
T Consensus 248 ~~~~~~IGd~V~IGaga~Il~gv~IGd~a~IGagsvV~~ 286 (310)
T 3f1x_A 248 IPRHPILEDDVIVYSNATILGRVTIGKGATVGGNIWVTE 286 (310)
T ss_dssp -CCSCEECTTCEECTTCEEESSCEECTTCEECSSCEECS
T ss_pred CCCCCEECCCcEEcCCCEECCCcEECCCCEECCCCEECC
Confidence 456778888888888888888888888888888888874
No 151
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.00 E-value=1.4e-09 Score=110.50 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=19.9
Q ss_pred CcEECCCCEECCCcEEC--CCCEECCCCEEeceEECCCCEECCCCEEec
Q 007143 333 EIEQSRSAQVGSFTVIG--YGTKIGSNSKISDSVIGEGCTIGSNVLIEG 379 (616)
Q Consensus 333 ~v~i~~~~~I~~~~~Ig--~~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~ 379 (616)
++.|++++.||++++|+ .++.||++ ++||++|.|+++|+|.+
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~-----~~IGd~v~I~~gvtIg~ 207 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGET-----AVVEDNVSILHGVTLGG 207 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTT-----CEECSSCEEETTCEEEC
T ss_pred CeEECCCCEECCCeEEccCCCeEECCC-----eEECCCCEEcCCCEEcC
Confidence 34444444444444444 33333333 35555555555555543
No 152
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=98.99 E-value=3.6e-09 Score=115.58 Aligned_cols=196 Identities=9% Similarity=0.128 Sum_probs=125.3
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCcccceeC---CeehHHHHHHHHHHC--------C------CcEEEEEcCCcHHHHH
Q 007143 27 QPLQAILLADSFTTKFRPITLERPKVLLPLV---NVPMINYTLAWLEAA--------G------VAEVFVFCCAHSKQVI 89 (616)
Q Consensus 27 ~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~---g~PlI~y~Le~L~~~--------G------v~eI~vv~~~~~~~i~ 89 (616)
.++.+||||+|.||||+ ...||+|+||+ |+|+|+++++.|.+. | +..+++...+..+.++
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~ 178 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATE 178 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHH
Confidence 46899999999999985 58899999999 999999999999987 6 6666556666688899
Q ss_pred HHHHhcCCCCCCCcEEEEEeC--------C--------------CccCHHHHHHHHHhccccc-----C-C-EEEEeCce
Q 007143 90 DYLENSEWFSQPNFTVKTIES--------H--------------NIISAGDALRLIYEQNVIH-----G-D-FVLISGDT 140 (616)
Q Consensus 90 ~~l~~~~~~~~~~~~i~~i~~--------~--------------~~~~~gdalr~~~~~~~i~-----~-d-fLlv~gD~ 140 (616)
+|+++..|.....-.|.++.+ + .+.|.|++++.+....++. + . +.+...|.
T Consensus 179 ~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN 258 (486)
T 2yqc_A 179 SFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDN 258 (486)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTB
T ss_pred HHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCC
Confidence 999875443211112332221 1 3569999988775444331 2 3 44555565
Q ss_pred ec--chhHHHHHHHHHHhhccCCCceEEEEEecC-CCCCCCcccccCCCceEEEEe--CCCCeEEEeeecCCCCCcceEe
Q 007143 141 VS--NMLLTQALQEHKERKKKDNNAVMTMIIKKS-KPSPITHQSRLGTDELFMAID--PNTKQLLYYEDKADHSKGTICL 215 (616)
Q Consensus 141 i~--~~~l~~~l~~h~~~~~~d~~a~mT~v~~~~-~~~~~~~~~r~~~~~~vv~id--~~~~rvl~~~e~p~~~~~~~~l 215 (616)
+. ..| -.++..|..+ ++.+++.+.+. .+. .+.| ++... ....+|+.|.++|....
T Consensus 259 ~l~~~~D-p~~lg~~~~~-----~~~~~~~vv~k~~~~-----e~~G----vl~~~~~dg~~~vvEy~E~~~~~~----- 318 (486)
T 2yqc_A 259 CLVKVAD-PIFIGFAIAK-----KFDLATKVVRKRDAN-----ESVG----LIVLDQDNQKPCVIEYSEISQELA----- 318 (486)
T ss_dssp TTCCTTC-HHHHHHHHHH-----TCSEEEEEEECCSTT-----CCCC----EEEEETTTTEEEEECGGGSCHHHH-----
T ss_pred ceeeccC-HHHHHHHHHc-----CCCEEEEEEEcCCCC-----Ccee----EEEEEecCCCEEEEEEecCCHHHh-----
Confidence 32 233 3467778775 47777766543 221 2445 55543 22335888888764100
Q ss_pred ehHhhhcCCc--eEEEeccccceeEeeCHhHHhh-hh
Q 007143 216 DKMLLAENPS--ISLHNDKQDCYIDICSPEVLSL-FT 249 (616)
Q Consensus 216 ~~~l~~~~~~--~~ir~dl~d~gIyIcsp~vl~l-f~ 249 (616)
+.+ .+. -.+.+...++++|+++.+++.. +.
T Consensus 319 --~~~--~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~ 351 (486)
T 2yqc_A 319 --NKK--DPQDSSKLFLRAANIVNHYYSVEFLNKMIP 351 (486)
T ss_dssp --HCE--ETTEEEEESSCEEEEEEEEEEHHHHHHHHH
T ss_pred --hcc--cccccccccccceeEEEEEEeHHHHHHHHH
Confidence 000 011 1234567788999999999876 44
No 153
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=98.98 E-value=4.6e-09 Score=104.10 Aligned_cols=112 Identities=16% Similarity=0.224 Sum_probs=82.6
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCC-CcEEEEEcCCcH-HHHHHHHHhcCCCCCCCcEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAG-VAEVFVFCCAHS-KQVIDYLENSEWFSQPNFTV 105 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~G-v~eI~vv~~~~~-~~i~~~l~~~~~~~~~~~~i 105 (616)
.+.|||||+|.|+||+. ..||+|+|++|+|||+|+++.+..++ +.+|+|++++.. +.+++++.. .+
T Consensus 7 ~~~aIIlAaG~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~---------~v 74 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH---------RA 74 (231)
T ss_dssp CEEEEEECCCCCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG---------GC
T ss_pred ceEEEEECCCCCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC---------Ce
Confidence 37899999999999984 67999999999999999999999984 999999998764 567766643 13
Q ss_pred EEEeCCCccCHHHHHHHHHhccccc----CC-EEEEeCce--ecchhHHHHHHHHHH
Q 007143 106 KTIESHNIISAGDALRLIYEQNVIH----GD-FVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 106 ~~i~~~~~~~~gdalr~~~~~~~i~----~d-fLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
.++.... +..++++... ..+. .+ +|++.||. +....+..+++.+++
T Consensus 75 ~~v~gg~--~r~~sv~~gl--~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 75 MIVAGGS--NRTDTVNLAL--TVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp EEEECCS--SHHHHHHHHH--GGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred EEEcCCC--chHHHHHHHH--HHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 3443222 2234444322 2232 34 78888998 666789999998765
No 154
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.96 E-value=9.9e-10 Score=107.48 Aligned_cols=77 Identities=27% Similarity=0.320 Sum_probs=46.7
Q ss_pred ceEECCCCEECCCCEEece----EECCCCEEC--------------CCcEE-eceEECCCcEECCCCEECCCCEECCCcE
Q 007143 362 DSVIGEGCTIGSNVLIEGS----YIWDNVIIE--------------DGCEL-RHVIVCDGVIMKAGAVLKPGVVLSFKVV 422 (616)
Q Consensus 362 ~s~IG~~~~Ig~~~~I~~s----~I~~~v~Ig--------------~~~~I-~~siIg~~v~Ig~~~~I~~g~vIg~~v~ 422 (616)
++.||++|.|+++|+|... ..++++... .++.+ .+++||++|+||.+|+|.+|+.||++|+
T Consensus 58 ~v~IG~~~~I~~~v~i~~~~~~~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~i 137 (212)
T 3eev_A 58 KLVIGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQDNDNFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAI 137 (212)
T ss_dssp CEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGSCCGGGTTCCCCCCCCCCEEECSSCEECTTCEECTTCEECTTCE
T ss_pred CcEECCCCEECCCCEEEeCCCCcccccceeeccceeecccccccccCCcccCCCeEECCCCEECCCCEEcCCCEECCCCE
Confidence 6678888888888877321 333322222 12212 3456677777777777777777777777
Q ss_pred ECCCCEE----CCCCEEccc
Q 007143 423 IGERFVV----PAHSKVSLL 438 (616)
Q Consensus 423 Ig~~~~v----~~~~~v~~~ 438 (616)
||++++| |+++++...
T Consensus 138 IgagsvV~~dVp~~~vv~G~ 157 (212)
T 3eev_A 138 IASRSVVTKDVAPYEVVGSN 157 (212)
T ss_dssp ECTTCEECSCBCTTEEEETT
T ss_pred ECCCCEEccccCCCcEEEec
Confidence 7777764 455555443
No 155
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.95 E-value=1.5e-09 Score=114.10 Aligned_cols=98 Identities=15% Similarity=0.259 Sum_probs=72.9
Q ss_pred CCCEECCCcEECCCCEECCCCEEec--eEECCCCE-ECCCCEEeceEECCCCEECCCcEEec-eE----ECCC----cEE
Q 007143 338 RSAQVGSFTVIGYGTKIGSNSKISD--SVIGEGCT-IGSNVLIEGSYIWDNVIIEDGCELRH-VI----VCDG----VIM 405 (616)
Q Consensus 338 ~~~~I~~~~~Ig~~~~Ig~~~~I~~--s~IG~~~~-Ig~~~~I~~s~I~~~v~Ig~~~~I~~-si----Ig~~----v~I 405 (616)
.+++|++++.|+.++.||+++.|.+ ++|+.+|. ||+ |.|.. .|+++++||++|.|.. +. +..+ ++|
T Consensus 216 ~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~nv~vIG~-~~I~~-~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvI 293 (387)
T 2rij_A 216 DNTRILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGA-CMVEG-RISSSAIVGEGSDVGGGASILGVLSGTSGNAISV 293 (387)
T ss_dssp TTCEESCGGGBBTTCBCCTTCEECSSSCEECTTCEESSC-CEECS-EECTTCEECTTCEECTTCEECCBCSSTTCCBCEE
T ss_pred CCEEEcCCCEECCCeEEcCCCEEeCCeeEECCCcEEECC-EEEee-EECCCCEECCCCEECCCceEcceecCCCccCeEE
Confidence 3677877788888888888887753 77888887 777 77764 7888888888888853 43 3333 778
Q ss_pred CCCCEECCCCEECCCcEECCCCEECCCCEEcccc
Q 007143 406 KAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLLQ 439 (616)
Q Consensus 406 g~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~~ 439 (616)
|++|+|+.+|+ .|++||++++|++|++|....
T Consensus 294 Gdnv~IGagAv--~GV~IGdgavIGAGsVVt~dv 325 (387)
T 2rij_A 294 GKACLLGANSV--TGIPLGDNCIVDAGIAVLEGT 325 (387)
T ss_dssp CTTCEECTTCE--ECSCBCTTCEECTTCEECTTC
T ss_pred eCCCEECCCCc--CCcEECCCCEECCCCEECCCc
Confidence 88888887777 778888888888888887644
No 156
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=98.94 E-value=4.3e-09 Score=102.59 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=75.4
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEEE
Q 007143 29 LQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVKTI 108 (616)
Q Consensus 29 l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~i 108 (616)
|.|||||+|.|+||+. ||+|+|++|+|||+|+++.|..+ +|+|++++ .+++..+... + ++ .++
T Consensus 1 m~aiILAgG~s~Rmg~-----~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~-~~~~~~~~~~--~----~~--~~v 63 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIGM-----EKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRD-EKQAEKLSSR--Y----EA--EFI 63 (208)
T ss_dssp CEEEEECCCCCTTTTS-----CGGGCEETTEEHHHHHHHHHTTS---EEEEECSS-HHHHHHHHTT--S----CS--CEE
T ss_pred CEEEEECCCchhhCCC-----CCcccEECCeeHHHHHHHHhcCC---CEEEEECC-HHHHHHHHHh--c----CC--eEE
Confidence 6899999999999984 99999999999999999999987 89888874 4555544322 1 22 234
Q ss_pred eCC-CccCHHHHHHHHHhcccccCCEEEEeCce--ecchhHHHHHHHHHH
Q 007143 109 ESH-NIISAGDALRLIYEQNVIHGDFVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 109 ~~~-~~~~~gdalr~~~~~~~i~~dfLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
... ...|...+++..... + .+.+++.||+ +....+..+++.+.+
T Consensus 64 ~d~~~~~G~~~si~~gl~~--~-~~~vv~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 64 WDLHKGVGSIAGIHAALRH--F-GSCVVAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp CCTTCCCSHHHHHHHHHHH--H-SSEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred ecCCCCCChHHHHHHHHHH--c-CCCEEEECCccCCCHHHHHHHHHHhhc
Confidence 322 223544666644322 3 5533999999 455678888887764
No 157
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.92 E-value=3.4e-09 Score=103.76 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=14.4
Q ss_pred cEECCCCEECCCCEE----eceEECCCCEECCCCEEe
Q 007143 346 TVIGYGTKIGSNSKI----SDSVIGEGCTIGSNVLIE 378 (616)
Q Consensus 346 ~~Ig~~~~Ig~~~~I----~~s~IG~~~~Ig~~~~I~ 378 (616)
+.||++|.|++.+.+ .+++||++|.||++|+|.
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~ 116 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIR 116 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEE
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEE
Confidence 444444444442222 234444444444444443
No 158
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.92 E-value=1.5e-09 Score=106.65 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=49.6
Q ss_pred CCEECCCCEEe-ceEECCCCEECCCCEEe-----ceEEC---CCCEECCC----------cE-EeceEECCCcEECCCCE
Q 007143 351 GTKIGSNSKIS-DSVIGEGCTIGSNVLIE-----GSYIW---DNVIIEDG----------CE-LRHVIVCDGVIMKAGAV 410 (616)
Q Consensus 351 ~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~-----~s~I~---~~v~Ig~~----------~~-I~~siIg~~v~Ig~~~~ 410 (616)
++.|.+++.|+ .++||++|.|+++|+|. +.+++ ..+.++.+ +. ..+++||++|+||.+++
T Consensus 53 ~~vi~~~~~i~~~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~Igd~v~IG~~a~ 132 (219)
T 4e8l_A 53 DQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVT 132 (219)
T ss_dssp GGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTTSCCCCCEEECSSCEECTTCE
T ss_pred ceEEeecceeCCCEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCcccccccccccccccCCcEECCCeEECCCCE
Confidence 45666666554 67899999999999884 22222 11122222 22 23567777777777777
Q ss_pred ECCCCEECCCcEECCCCEE
Q 007143 411 LKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 411 I~~g~vIg~~v~Ig~~~~v 429 (616)
|.+|+.||++++||++++|
T Consensus 133 I~~gv~IG~~~~IgagsvV 151 (219)
T 4e8l_A 133 IMPGVKIGDGAIIAAEAVV 151 (219)
T ss_dssp ECTTCEECTTCEECTTCEE
T ss_pred EcCCCEECCCCEECCCCEE
Confidence 7777777777777777664
No 159
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=98.92 E-value=2.2e-09 Score=113.56 Aligned_cols=110 Identities=19% Similarity=0.262 Sum_probs=82.1
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHH-CCCcEEEEEcCCcHHHHHHHHHhcCCCCCCCcEEE
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEA-AGVAEVFVFCCAHSKQVIDYLENSEWFSQPNFTVK 106 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~-~Gv~eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~ 106 (616)
++.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|.. .++++|+|+++ ..+.+++++.. +.
T Consensus 3 ki~aIILAaG~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~~----------v~ 68 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTKN----------YE 68 (371)
T ss_dssp CEEEEEECCSCCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCSS----------SE
T ss_pred ccEEEEECCCCCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhCC----------CE
Confidence 47899999999999983 579999999999999999999998 58999999998 65656554321 23
Q ss_pred EEeCCCccCHHHHHHHHHhcccccCC-EEEEeCce--ecchhHHHHHHHHHH
Q 007143 107 TIESHNIISAGDALRLIYEQNVIHGD-FVLISGDT--VSNMLLTQALQEHKE 155 (616)
Q Consensus 107 ~i~~~~~~~~gdalr~~~~~~~i~~d-fLlv~gD~--i~~~~l~~~l~~h~~ 155 (616)
++.. ..+...+++... ..+..+ +|++.||+ +....+..+++.|++
T Consensus 69 ~v~~--g~g~~~sv~~aL--~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~ 116 (371)
T 1w55_A 69 FIEG--GDTRAESLKKAL--ELIDSEFVMVSDVARVLVSKNLFDRLIENLDK 116 (371)
T ss_dssp EEEC--CSSHHHHHHHHH--TTCCSSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred EEeC--CCChHHHHHHHH--HhcCCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 3422 234556666433 334444 89999998 456688898887754
No 160
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.91 E-value=3.3e-09 Score=104.35 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=37.3
Q ss_pred ECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEccc
Q 007143 399 VCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSLL 438 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~~ 438 (616)
+..+++||++|+|+.+|+|.++|+||++++|+++++|+..
T Consensus 116 ~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~d 155 (220)
T 4hur_A 116 LKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN 155 (220)
T ss_dssp CCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred ccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEccc
Confidence 5678999999999999999999999999999999999863
No 161
>1paq_A Translation initiation factor EIF-2B epsilon subunit; heat repeat, AA motif; 2.30A {Saccharomyces cerevisiae} SCOP: a.118.1.14
Probab=98.91 E-value=1e-10 Score=112.21 Aligned_cols=47 Identities=38% Similarity=0.403 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcEEEeecccccccCCChHHhhccc
Q 007143 563 SVYFEKEVEATFLRAVEENVKVDHVILEVNSLRGSLDFTCSLLMRLE 609 (616)
Q Consensus 563 ~~~F~~e~~~~l~r~~~~~~~~d~~~lEin~lr~a~n~~~~~v~~~~ 609 (616)
...|++||+++|+||+++||++||++||||+||||||++.++|+|+.
T Consensus 19 ~~~F~~Ev~~sL~r~~~e~~~~d~iilEin~lr~a~n~s~~ev~~~v 65 (189)
T 1paq_A 19 DEDFEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIAT 65 (189)
T ss_dssp --CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999999975
No 162
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.87 E-value=1.1e-09 Score=106.85 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=56.6
Q ss_pred CCcEECCCCEECCC--cEECCCCEECCCCEEe-ceEECCCCEECCCCEEec---eE-----ECCCCEECCCc--------
Q 007143 332 LEIEQSRSAQVGSF--TVIGYGTKIGSNSKIS-DSVIGEGCTIGSNVLIEG---SY-----IWDNVIIEDGC-------- 392 (616)
Q Consensus 332 ~~v~i~~~~~I~~~--~~Ig~~~~Ig~~~~I~-~s~IG~~~~Ig~~~~I~~---s~-----I~~~v~Ig~~~-------- 392 (616)
+++.|++.+.|+++ +.+ .++.|..++.++ .++||++|.||++|+|.. .. ++.++.++.++
T Consensus 28 ~~i~IG~~~~I~~~~~~~i-~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~ 106 (209)
T 1mr7_A 28 ENVEVGEYSYYDSKNGETF-DKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLD 106 (209)
T ss_dssp TTEEECTTCEEECSSSCCG-GGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGG
T ss_pred CCeEECCCcEEcCCCceEE-eceEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccc
Confidence 45555555555543 334 456666666664 578999999999998731 11 11222333332
Q ss_pred --E-EeceEECCCcEECCCCEECCCCEECCCcEECCCCEE
Q 007143 393 --E-LRHVIVCDGVIMKAGAVLKPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 393 --~-I~~siIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v 429 (616)
. ..+++||++|+||.+++|.+|++||++++||++++|
T Consensus 107 ~~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V 146 (209)
T 1mr7_A 107 QLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVV 146 (209)
T ss_dssp GSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEE
Confidence 1 134566666666666666666666666666666653
No 163
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.81 E-value=6.3e-09 Score=101.60 Aligned_cols=69 Identities=26% Similarity=0.384 Sum_probs=44.5
Q ss_pred eceEECCCCEECCCCEEe--ce--EECCC---------------CEECCCcEEe-ceEECCCcEECCCCEECCCCEECCC
Q 007143 361 SDSVIGEGCTIGSNVLIE--GS--YIWDN---------------VIIEDGCELR-HVIVCDGVIMKAGAVLKPGVVLSFK 420 (616)
Q Consensus 361 ~~s~IG~~~~Ig~~~~I~--~s--~I~~~---------------v~Ig~~~~I~-~siIg~~v~Ig~~~~I~~g~vIg~~ 420 (616)
...+||++|.|+++|+|. +. ...++ +.++.++.+. .++||++|+||.+|+|.+|++||++
T Consensus 55 ~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~ 134 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHG 134 (212)
T ss_dssp CCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGGGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTT
T ss_pred cCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccccccccCceecCCeEECCCCEECCCCEEeCCCEECCC
Confidence 567888888888888873 11 22221 2334444443 4667777777777777777777777
Q ss_pred cEECCCCEE
Q 007143 421 VVIGERFVV 429 (616)
Q Consensus 421 v~Ig~~~~v 429 (616)
|+||++++|
T Consensus 135 ~~IgagsvV 143 (212)
T 1xat_A 135 AIIGSRALV 143 (212)
T ss_dssp CEECTTCEE
T ss_pred CEECCCCEE
Confidence 777777764
No 164
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.79 E-value=1.7e-08 Score=102.68 Aligned_cols=83 Identities=24% Similarity=0.318 Sum_probs=44.5
Q ss_pred cEECCCCEECCCcEECC--CCEECCCCEEeceEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCcEECCCCEE
Q 007143 334 IEQSRSAQVGSFTVIGY--GTKIGSNSKISDSVIGEGCTIGSNVLIEGSYIWDNVIIEDGCELRHVIVCDGVIMKAGAVL 411 (616)
Q Consensus 334 v~i~~~~~I~~~~~Ig~--~~~Ig~~~~I~~s~IG~~~~Ig~~~~I~~s~I~~~v~Ig~~~~I~~siIg~~v~Ig~~~~I 411 (616)
+.|++++.|+++++|+. ++.||+ +++||++|.|+.+|+|.++. ...+ ..+++||++|+||++++|
T Consensus 158 ~~I~p~a~IG~gv~I~~g~gvvIG~-----~~~IG~~v~I~~gvtLg~~~----~~~~----~~~~~IGd~v~IGaga~I 224 (289)
T 1t3d_A 158 VDIHPAAKIGRGIMLDHATGIVVGE-----TAVIENDVSILQSVTLGGTG----KSGG----DRHPKIREGVMIGAGAKI 224 (289)
T ss_dssp CEECTTCEECSSCEECSCTTCEECT-----TCEECSSCEECTTCEEECCS----SSCS----SCSCEECTTCEECTTCEE
T ss_pred eEEcCCCEEcCCEEECCCCceEECC-----CcEECCCCEEcCCcEECCCc----cccC----CCCeEECCCeEECCCCEE
Confidence 44444444444444442 233332 34556666666665554321 1111 234566777777777777
Q ss_pred CCCCEECCCcEECCCCEE
Q 007143 412 KPGVVLSFKVVIGERFVV 429 (616)
Q Consensus 412 ~~g~vIg~~v~Ig~~~~v 429 (616)
..+++||++|+||+|++|
T Consensus 225 lggv~IG~~a~IGagsvV 242 (289)
T 1t3d_A 225 LGNIEVGRGAKIGAGSVV 242 (289)
T ss_dssp ESSCEECTTCEECTTCEE
T ss_pred ecCcEECCCCEECCCCEE
Confidence 766777777777766654
No 165
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.74 E-value=2.7e-08 Score=100.18 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=24.6
Q ss_pred cCCEE--EEeCceecchhHHHHHHHHHHhh
Q 007143 130 HGDFV--LISGDTVSNMLLTQALQEHKERK 157 (616)
Q Consensus 130 ~~dfL--lv~gD~i~~~~l~~~l~~h~~~~ 157 (616)
.+++| ++++|++...+|.++|.+|..++
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 35588 89999999999999999999875
No 166
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.65 E-value=2.8e-08 Score=97.47 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 400 CDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 400 g~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
..+++||++|+|+.+++|..+++||++++|+++++|..
T Consensus 116 ~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 116 KGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp CCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 34688999999999999999999999999999999875
No 167
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.65 E-value=4.7e-08 Score=95.48 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=36.8
Q ss_pred EECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 398 IVCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 398 iIg~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
.++.+++||++|+|+.+|+|.++|+||++++|+++++|..
T Consensus 107 ~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~ 146 (212)
T 3eev_A 107 TRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTK 146 (212)
T ss_dssp CCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred ccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 3566899999999999999999999999999999999985
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.49 E-value=3.5e-07 Score=89.16 Aligned_cols=39 Identities=8% Similarity=0.100 Sum_probs=24.5
Q ss_pred ECCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 399 VCDGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 399 Ig~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
+...++||++|+|+.+|+|.++|+||++++|+++++|..
T Consensus 107 ~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 107 PAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred ecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 444566666666666666666666666666666666653
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.47 E-value=8.5e-08 Score=93.45 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=28.5
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Q 007143 401 DGVIMKAGAVLKPGVVLSFKVVIGERFVVPAHSKVSL 437 (616)
Q Consensus 401 ~~v~Ig~~~~I~~g~vIg~~v~Ig~~~~v~~~~~v~~ 437 (616)
.+++||++|+|+.+++|..+++||++++|+++++|..
T Consensus 112 ~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~ 148 (209)
T 1mr7_A 112 GDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVK 148 (209)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 4577888888888888888888888888888887764
No 170
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.63 E-value=0.0018 Score=70.35 Aligned_cols=71 Identities=13% Similarity=0.188 Sum_probs=57.1
Q ss_pred cCCCeEEEEEeCCCCCCCCCCCCCCCcccceeC-CeehHHHHHHHHHHC----CC-cEEEEEcCCc-HHHHHHHHHhcCC
Q 007143 25 ARQPLQAILLADSFTTKFRPITLERPKVLLPLV-NVPMINYTLAWLEAA----GV-AEVFVFCCAH-SKQVIDYLENSEW 97 (616)
Q Consensus 25 ~~~~l~aVILA~g~~~R~~PlT~~~PK~Llpi~-g~PlI~y~Le~L~~~----Gv-~eI~vv~~~~-~~~i~~~l~~~~~ 97 (616)
...++.+|+||+|.||||+- ..||.++|+. ++++++++++.+... |+ --.+|.++.. .+.+++|+++..|
T Consensus 124 ~l~kvavvlLaGGlGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 124 VLNKLVVVKLNGGLGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp TCTTEEEEEECCCBCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred hcCceEEEEeCCCCccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 35678899999999999974 7799999997 799999999998886 43 2466777754 6788899987655
Q ss_pred C
Q 007143 98 F 98 (616)
Q Consensus 98 ~ 98 (616)
.
T Consensus 201 f 201 (528)
T 3r3i_A 201 C 201 (528)
T ss_dssp S
T ss_pred c
Confidence 3
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.66 E-value=0.0035 Score=60.41 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=72.4
Q ss_pred CCeEEEEEe--CCCCCCCCCCCCCCCcccceeCCeehHHHHHHHHHHCCCcEE-EEEcCCcHHHHHHHHHhcCCCCCCCc
Q 007143 27 QPLQAILLA--DSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLEAAGVAEV-FVFCCAHSKQVIDYLENSEWFSQPNF 103 (616)
Q Consensus 27 ~~l~aVILA--~g~~~R~~PlT~~~PK~Llpi~g~PlI~y~Le~L~~~Gv~eI-~vv~~~~~~~i~~~l~~~~~~~~~~~ 103 (616)
+.|.+||++ +.--||+.| .+.+......++|||+|+++.+..+++..+ ++++++.. +. .|. +
T Consensus 2 ~~~~~vip~k~g~~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~------~~~---~- 66 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSP---VLSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG--LE------EMT---E- 66 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT--CS------SCC---S-
T ss_pred CceEEEEEeCCCCCccccCc---cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH--HH------hhc---C-
Confidence 347899999 445567664 222333336679999999999999999999 88887542 11 111 2
Q ss_pred EEEEEeCCCccCHHHHHHHHHhcccccCCEEEEeCce--ecchhHHHHHH
Q 007143 104 TVKTIESHNIISAGDALRLIYEQNVIHGDFVLISGDT--VSNMLLTQALQ 151 (616)
Q Consensus 104 ~i~~i~~~~~~~~gdalr~~~~~~~i~~dfLlv~gD~--i~~~~l~~~l~ 151 (616)
+.++.+. .|++.+|+...... .+.++++.||+ +....+..+++
T Consensus 67 -~~~v~~~--~gl~~sl~~a~~~~--~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 67 -ARVLLDE--KDLNEALNRYLKEA--EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -SEEEECC--SCHHHHHHHHHHHC--CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred -CEEEECC--CCHHHHHHHHHHhc--CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 3445544 78999999764332 44599999999 66667787765
No 172
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=95.96 E-value=0.048 Score=58.76 Aligned_cols=67 Identities=16% Similarity=0.204 Sum_probs=54.0
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCccccee-CCeehHHHHHHHHHHC----CC-cEEEEEcCCc-HHHHHHHHHhcCC
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPL-VNVPMINYTLAWLEAA----GV-AEVFVFCCAH-SKQVIDYLENSEW 97 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi-~g~PlI~y~Le~L~~~----Gv-~eI~vv~~~~-~~~i~~~l~~~~~ 97 (616)
++-+|+||+|.||||+- ..||.++|+ .++++++..++.+... |+ --.+|.++.. .+.+++++++..|
T Consensus 76 kvavvlLaGGlGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~ 149 (484)
T 3gue_A 76 QAVVLKLNGGLGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPT 149 (484)
T ss_dssp TEEEEEEECCCCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHH
T ss_pred hcEEEEEcCCcccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcc
Confidence 57889999999999974 679999999 6799999999998874 33 2567888754 6788899987543
No 173
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=95.26 E-value=0.098 Score=57.92 Aligned_cols=64 Identities=19% Similarity=0.368 Sum_probs=52.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCcccceeC---CeehHHHHHHHHHHC-CCc-EEEEEcCCc-HHHHHHHHHh
Q 007143 28 PLQAILLADSFTTKFRPITLERPKVLLPLV---NVPMINYTLAWLEAA-GVA-EVFVFCCAH-SKQVIDYLEN 94 (616)
Q Consensus 28 ~l~aVILA~g~~~R~~PlT~~~PK~Llpi~---g~PlI~y~Le~L~~~-Gv~-eI~vv~~~~-~~~i~~~l~~ 94 (616)
++.+|+||+|.||||+- ..||.++|+. +++++++.++.+.+. |+. -.+|.++.. .+.+++++++
T Consensus 114 kvavvllaGGlGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~ 183 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE 183 (630)
T ss_dssp GEEEEEECCCEEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH
T ss_pred hceEEEecCCcccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH
Confidence 57889999999999875 6799999997 899999999999864 432 467777754 6788889887
No 174
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=74.67 E-value=0.27 Score=50.82 Aligned_cols=43 Identities=12% Similarity=0.127 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeecccccccCCChHHhhccc
Q 007143 567 EKEVEATFLRAVEENVKVDHVILEVNSLRGSLDFTCSLLMRLE 609 (616)
Q Consensus 567 ~~e~~~~l~r~~~~~~~~d~~~lEin~lr~a~n~~~~~v~~~~ 609 (616)
..|+.++|.+.++++.++++++.+||+.+.+||++.++|+|+.
T Consensus 208 ~~ev~~~L~~~l~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~l 250 (339)
T 1ug3_A 208 SEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLVRAL 250 (339)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHhcCChhhCChHHHHHHH
Confidence 4699999999999999999999999999999999999999975
No 175
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=73.50 E-value=8.3 Score=37.49 Aligned_cols=86 Identities=12% Similarity=0.118 Sum_probs=57.6
Q ss_pred eehHHHHHHHHHHCCCcEEEEEcCCcHHHH---HHHHHhcCCCCCCCcEEEEEeCCCccCHHHHHHHHHhccccc--CCE
Q 007143 59 VPMINYTLAWLEAAGVAEVFVFCCAHSKQV---IDYLENSEWFSQPNFTVKTIESHNIISAGDALRLIYEQNVIH--GDF 133 (616)
Q Consensus 59 ~PlI~y~Le~L~~~Gv~eI~vv~~~~~~~i---~~~l~~~~~~~~~~~~i~~i~~~~~~~~gdalr~~~~~~~i~--~df 133 (616)
++|+.++++.+...+...++++.+.....+ ...+ . ..+.++. +...|+|..|+......+-. +.+
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-~--------~~~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~v 106 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-G--------PQHMFAA-QQGLDLGERMKHAMQKAFDDGYDRV 106 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-C--------TTSEEEE-CCSSSHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-c--------CCcEEec-CCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 699999999999998877777776544433 3333 1 1123333 34568999888654321112 349
Q ss_pred EEEeCce--ecchhHHHHHHHHH
Q 007143 134 VLISGDT--VSNMLLTQALQEHK 154 (616)
Q Consensus 134 Llv~gD~--i~~~~l~~~l~~h~ 154 (616)
+++.+|+ |...+|..+++.+.
T Consensus 107 liigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 107 VLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp EEECSSCTTCCHHHHHHHHHHTT
T ss_pred EEEcCCCCCCCHHHHHHHHHHhc
Confidence 9999999 88889999887544
No 176
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=58.00 E-value=66 Score=30.16 Aligned_cols=98 Identities=10% Similarity=0.188 Sum_probs=62.8
Q ss_pred cceeCC-eehHHHHHHHHHHCCCc--EEEEEcCCcHHHHHHHHHhcCCCCCCCcEEEEEeCC--------CccCHHHHHH
Q 007143 53 LLPLVN-VPMINYTLAWLEAAGVA--EVFVFCCAHSKQVIDYLENSEWFSQPNFTVKTIESH--------NIISAGDALR 121 (616)
Q Consensus 53 Llpi~g-~PlI~y~Le~L~~~Gv~--eI~vv~~~~~~~i~~~l~~~~~~~~~~~~i~~i~~~--------~~~~~gdalr 121 (616)
++|.-| ...|..+|+.+...... ||+|+-....+...+.+++. .. ...+.++..+ ...|.+.++.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~--~~--~~~i~~i~~~~~~~~~~~~n~G~~~a~N 81 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPF--LN--DNRVRFYQSDISGVKERTEKTRYAALIN 81 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGG--GG--STTEEEEECCCCSHHHHHSSCHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHH--hh--cCCEEEEecccccccccccccCHHHHHH
Confidence 445544 57888999999876543 67777665556666666542 11 1246777766 5667777776
Q ss_pred HHHhcccccCC-EEEEeCceecch-hHHHHHHHHHHh
Q 007143 122 LIYEQNVIHGD-FVLISGDTVSNM-LLTQALQEHKER 156 (616)
Q Consensus 122 ~~~~~~~i~~d-fLlv~gD~i~~~-~l~~~l~~h~~~ 156 (616)
.... ..+++ ++++-+|.+... -|..+++.+.+.
T Consensus 82 ~gi~--~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 82 QAIE--MAEGEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHH--HCCCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHH--HcCCCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 5433 34677 778888885554 577887777653
No 177
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=35.01 E-value=1.5e+02 Score=31.01 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=63.3
Q ss_pred cceeCCe--ehHHHHHHHHHHCCC----cEEEEEcCCcH-----HHHHHHHHhcCCCCCCCcEEEEEeCCCccCHHHHHH
Q 007143 53 LLPLVNV--PMINYTLAWLEAAGV----AEVFVFCCAHS-----KQVIDYLENSEWFSQPNFTVKTIESHNIISAGDALR 121 (616)
Q Consensus 53 Llpi~g~--PlI~y~Le~L~~~Gv----~eI~vv~~~~~-----~~i~~~l~~~~~~~~~~~~i~~i~~~~~~~~gdalr 121 (616)
++|.-|. ..|..+|+.+...-. .||+||-.... +.++++.... +..+.++..++..|.+.|+.
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~------~~~v~vi~~~~n~G~~~a~N 107 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL------KVPVHVIRMEQRSGLIRARL 107 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS------SSCEEEEECSSCCCHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC------CCcEEEEECCCCCChHHHHH
Confidence 5666674 589999999988643 37877764322 3355554431 12477887776778888877
Q ss_pred HHHhcccccCC-EEEEeCceecch-hHHHHHHHHHHh
Q 007143 122 LIYEQNVIHGD-FVLISGDTVSNM-LLTQALQEHKER 156 (616)
Q Consensus 122 ~~~~~~~i~~d-fLlv~gD~i~~~-~l~~~l~~h~~~ 156 (616)
.... ..+++ ++++-+|.+... -|..+++...+.
T Consensus 108 ~g~~--~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~ 142 (472)
T 1xhb_A 108 KGAA--VSRGQVITFLDAHCECTAGWLEPLLARIKHD 142 (472)
T ss_dssp HHHH--HCCSSEEEEEESSEEECTTCHHHHHHHHHHC
T ss_pred HHHH--hccCCeEEEECCCeEeCccHHHHHHHHHHhC
Confidence 5433 34577 788889986655 578888877654
No 178
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=31.19 E-value=2.6e+02 Score=25.42 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=57.0
Q ss_pred cceeCC-eehHHHHHHHHHHCCCc--EEEEEcCCc----HHHHHHHHHhcCCCCCCCcEEEEEeCCCccCHHHHHHHHHh
Q 007143 53 LLPLVN-VPMINYTLAWLEAAGVA--EVFVFCCAH----SKQVIDYLENSEWFSQPNFTVKTIESHNIISAGDALRLIYE 125 (616)
Q Consensus 53 Llpi~g-~PlI~y~Le~L~~~Gv~--eI~vv~~~~----~~~i~~~l~~~~~~~~~~~~i~~i~~~~~~~~gdalr~~~~ 125 (616)
++|.-| ...|..+|+.|...... ||+|+-... .+.++++..+. -.+.++.. +..|.+.+......
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~-------~~i~~i~~-~n~G~~~a~N~g~~ 81 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY-------PNIKVIHK-KNAGLGMACNSGLD 81 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC-------SSEEEEEC-CCCCHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC-------CCEEEEEC-CCCChHHHHHHHHH
Confidence 445444 56888999998876443 677665432 23344444331 13566653 46788888775433
Q ss_pred cccccCC-EEEEeCceecch-hHHHHHHHHHH
Q 007143 126 QNVIHGD-FVLISGDTVSNM-LLTQALQEHKE 155 (616)
Q Consensus 126 ~~~i~~d-fLlv~gD~i~~~-~l~~~l~~h~~ 155 (616)
..+++ ++++-.|.+... -|..+++...+
T Consensus 82 --~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 82 --VATGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp --HCCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred --HcCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 34677 777788885554 57777777665
No 179
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=28.99 E-value=2.3e+02 Score=30.61 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=61.9
Q ss_pred cceeCCe--ehHHHHHHHHHHCCC-c---EEEEEcCCc-----HHHHHHHHHhcCCCCCCCcEEEEEeCCCccCHHHHHH
Q 007143 53 LLPLVNV--PMINYTLAWLEAAGV-A---EVFVFCCAH-----SKQVIDYLENSEWFSQPNFTVKTIESHNIISAGDALR 121 (616)
Q Consensus 53 Llpi~g~--PlI~y~Le~L~~~Gv-~---eI~vv~~~~-----~~~i~~~l~~~~~~~~~~~~i~~i~~~~~~~~gdalr 121 (616)
++|.-|. ..|..+|+.+..... . ||+||-... .+.++++.... -.|.++..++..|.+.|+.
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~-------~~v~vi~~~~n~G~~~A~N 189 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF-------PSVRILRTKKREGLIRTRM 189 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS-------TTEEEEECSSCCCHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC-------CeEEEEECCCCCCHHHHHH
Confidence 4666675 488888988877533 2 787776432 23445554331 1477787777788888877
Q ss_pred HHHhcccccCC-EEEEeCceecch-hHHHHHHHHHHh
Q 007143 122 LIYEQNVIHGD-FVLISGDTVSNM-LLTQALQEHKER 156 (616)
Q Consensus 122 ~~~~~~~i~~d-fLlv~gD~i~~~-~l~~~l~~h~~~ 156 (616)
.... ..+++ ++++.+|.+... -|..+++...+.
T Consensus 190 ~G~~--~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~ 224 (570)
T 2d7i_A 190 LGAS--VATGDVITFLDSHCEANVNWLPPLLDRIARN 224 (570)
T ss_dssp HHHH--HCCSSEEEECCSSEEECTTCSHHHHHHHHHC
T ss_pred HHHH--hcCCCEEEEEcCCccccccHHHHHHHHHHhC
Confidence 5543 24677 677788886655 578888877653
Done!