Query 007148
Match_columns 616
No_of_seqs 324 out of 968
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 18:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007148.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007148hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 99.9 1.1E-27 3.6E-32 240.8 7.2 227 21-316 24-256 (256)
2 3i3n_A Kelch-like protein 11; 99.9 3.9E-27 1.3E-31 239.8 9.8 226 21-318 25-265 (279)
3 2vkp_A BTB/POZ domain-containi 99.8 4.7E-21 1.6E-25 168.0 7.9 103 22-133 2-109 (109)
4 3htm_A Speckle-type POZ protei 99.8 3.5E-21 1.2E-25 181.1 7.6 122 21-159 27-149 (172)
5 4eoz_A Speckle-type POZ protei 99.8 1.1E-21 3.6E-26 179.6 2.1 122 21-159 18-140 (145)
6 2if5_A Zinc finger and BTB dom 99.8 8.1E-21 2.8E-25 169.7 7.0 102 21-130 18-120 (120)
7 3b84_A Zinc finger and BTB dom 99.8 4.3E-21 1.5E-25 172.1 5.0 101 21-132 17-117 (119)
8 2vpk_A Myoneurin; transcriptio 99.8 9.8E-21 3.4E-25 168.4 6.8 100 21-131 15-116 (116)
9 1buo_A POZ domain, protein (pr 99.8 1.3E-20 4.4E-25 169.2 7.1 101 21-133 21-121 (121)
10 1r29_A B-cell lymphoma 6 prote 99.8 1.7E-20 6E-25 169.3 7.8 102 21-131 22-125 (127)
11 2yy9_A Zinc finger and BTB dom 99.8 6.3E-21 2.2E-25 174.9 4.3 103 21-134 18-120 (135)
12 2z8h_A Transcription regulator 99.8 2.1E-20 7.2E-25 171.7 6.3 106 21-135 29-135 (138)
13 3ga1_A Nucleus accumbens-assoc 99.8 1.2E-20 4E-25 171.3 4.5 101 21-132 26-127 (129)
14 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.6E-20 5.5E-25 168.3 5.0 98 21-130 20-117 (119)
15 3ohu_A Transcription regulator 99.8 1.2E-20 4.1E-25 169.9 3.4 100 21-129 25-125 (125)
16 2ppi_A Gigaxonin; BTB domain, 99.8 2.7E-20 9.4E-25 172.8 5.7 102 21-130 40-144 (144)
17 3m5b_A Zinc finger and BTB dom 99.8 4.8E-20 1.6E-24 166.4 5.7 94 22-131 24-117 (119)
18 2ihc_A Transcription regulator 99.8 3.6E-20 1.2E-24 167.2 3.6 101 21-130 22-123 (124)
19 3hqi_A Speckle-type POZ protei 99.8 4.6E-19 1.6E-23 182.6 7.6 131 22-169 168-302 (312)
20 3fkc_A Transcriptional regulat 99.7 2.3E-18 7.7E-23 154.2 5.3 89 21-115 24-113 (116)
21 2ast_A S-phase kinase-associat 99.3 1.1E-12 3.6E-17 124.2 5.7 95 31-134 3-127 (159)
22 4ajy_C Transcription elongatio 99.1 5.4E-11 1.8E-15 103.7 6.5 79 31-112 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 3.3E-10 1.1E-14 105.3 6.0 92 31-134 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.8 4.5E-10 1.5E-14 106.5 0.1 92 31-133 6-125 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 8.2E-07 2.8E-11 77.8 5.5 79 31-112 6-99 (99)
26 2fnj_C Transcription elongatio 98.2 8.8E-07 3E-11 77.1 4.5 79 31-112 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.2 1.6E-06 5.6E-11 82.9 5.7 95 30-133 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.5 4.9E-05 1.7E-09 68.0 3.8 79 31-112 19-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.00047 1.6E-08 60.8 7.9 92 30-130 7-105 (107)
30 2eqx_A Kelch repeat and BTB do 95.8 0.0023 7.9E-08 55.9 1.3 76 143-255 9-84 (105)
31 3drx_A BTB/POZ domain-containi 95.4 0.03 1E-06 55.0 7.5 94 30-132 13-113 (202)
32 3kvt_A Potassium channel prote 94.5 0.013 4.5E-07 52.4 2.1 82 31-115 7-92 (115)
33 1t1d_A Protein (potassium chan 92.1 0.12 4.2E-06 45.1 4.2 82 31-115 3-89 (100)
34 1s1g_A Potassium voltage-gated 91.5 0.12 4.2E-06 46.7 3.6 80 30-115 14-99 (124)
35 2nz0_B Potassium voltage-gated 89.9 0.17 5.9E-06 46.8 3.1 81 29-115 35-121 (140)
36 1nn7_A Potassium channel KV4.2 89.8 0.1 3.5E-06 45.8 1.5 79 31-115 2-86 (105)
37 1pd7_B MAD1; PAH2, SIN3, eukar 62.4 1.6 5.6E-05 29.0 0.1 16 98-113 3-18 (26)
38 1vjh_A BET V I allergen family 48.0 12 0.00041 33.1 3.3 32 398-440 91-122 (122)
39 2r9r_B Paddle chimera voltage 45.1 12 0.0004 41.3 3.3 83 30-115 53-140 (514)
40 3b0b_C CENP-X, centromere prot 35.2 36 0.0012 28.5 4.0 43 339-398 6-48 (81)
41 2eqx_A Kelch repeat and BTB do 26.9 39 0.0013 28.7 3.0 36 93-134 6-41 (105)
42 3fs7_A Parvalbumin, thymic; ca 25.9 2.5E+02 0.0087 22.4 8.0 60 400-463 21-83 (109)
43 4dra_E Centromere protein X; D 22.8 54 0.0019 27.7 3.0 43 339-398 10-52 (84)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.94 E-value=1.1e-27 Score=240.84 Aligned_cols=227 Identities=11% Similarity=0.068 Sum_probs=164.2
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-c--cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA 97 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~ 97 (616)
.++.++.+|||+|.|||+.|++||.+|+++|+||++||+.. . +....+|.|++++ +++|+.+++|+||+++.++.
T Consensus 24 ~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~ 101 (256)
T 3hve_A 24 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNE 101 (256)
T ss_dssp TCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-
T ss_pred HHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccH
Confidence 47889999999999999999999999999999999999864 3 5566789999987 79999999999999999999
Q ss_pred ccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhhccchhhHHHHHhcccchHhhhhhhcchhhHHHHHHHhhccCCCC
Q 007148 98 YNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRSVDSIASKTSVDPAN 177 (616)
Q Consensus 98 ~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~sw~dsi~~L~~C~~L~~~Ae~~~Iv~rCidsLA~kA~~~~~~ 177 (616)
.||..++.||.+|||++ |+..|+.||.+.+. ..||..++.+|+.+++ +.|..++..
T Consensus 102 ~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~~~~---- 157 (256)
T 3hve_A 102 DTIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCL-----HHVHYLATE---- 157 (256)
T ss_dssp CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTC-----HHHHHHHHH----
T ss_pred hHHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCc-----HHHHHHHHH----
Confidence 99999999999999995 88999999999984 5899999999999983 444444422
Q ss_pred ccccccccCCCCCCcccccccccccccccCCCCchhhhcccCChHHHHHHHHHHHhcCC--CCchhHHHHHHHHHHhhcC
Q 007148 178 VTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDIDLYKRVMIAVKSKGR--MDGSVIGEALRIYAVRWLP 255 (616)
Q Consensus 178 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~id~~~rVI~amks~g~--~~~e~I~~aL~~Ya~r~L~ 255 (616)
|. .+ ++...+-.+++..|+.+....++ ++..+ .+++.|.++++.|+++..+
T Consensus 158 ----~i------------------~~--~f~~v~~~~~f~~L~~~~l~~lL---~~d~L~v~~E~~v~~av~~W~~~~~~ 210 (256)
T 3hve_A 158 ----YL------------------ET--HFRDVSSTEEFLELSPQKLKEVI---SLEKLNVGNERYVFEAVIRWIAHDTE 210 (256)
T ss_dssp ----HH------------------HH--HHHHHTTCHHHHSSCHHHHHHHH---HCC-------CTTHHHHTTTCCC--C
T ss_pred ----HH------------------HH--HHHHHhCCcchhcCCHHHHHHHH---ccCCCCCCCHHHHHHHHHHHHHcCHH
Confidence 11 00 11122335789999999955544 44433 3577899999999987754
Q ss_pred CccccccchhhhhhhHHHHHHHHHhcCCCCCcccChHHHHHHHhhhhhccCC-HHHHHHHHH
Q 007148 256 DSIDALVSDAQTLRNKCLVETIVCLLPTDKSVGCSCSFLLKLLKVSVLVGVD-NSAREDLVK 316 (616)
Q Consensus 256 ~~~~~~~~~~~~~~~r~LLEtIv~LLP~ek~s~vsc~FL~~LLR~A~~l~as-~~cr~~LEk 316 (616)
... ..-..|++.| ++ | . +|..||...++...++..+ +.|+..|++
T Consensus 211 ~R~---------~~~~~ll~~V-Rf-~----~-l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 211 IRK---------VHMKDVMSAL-WV-S----G-LDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp CST---------TTHHHHHHHH-HH-H----T-TCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred HHH---------HHHHHHHHhC-CC-C----C-CCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 211 1124788887 88 5 5 9999999999999999998 789998875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.94 E-value=3.9e-27 Score=239.83 Aligned_cols=226 Identities=16% Similarity=0.150 Sum_probs=174.4
Q ss_pred eeeccCCceeEEEEEC---CEEEEecCcccccCCHHHHHhhcCC-ccCCCCceeec------CCCCCHHHHHHHHHHhcC
Q 007148 21 RYVTSELATDVIINVG---EVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIV------DFPGGPKAFEICAKFCYG 90 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg---~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~------d~pgGa~aFelv~~FcYg 90 (616)
.++.+|.+|||+|.|| |+.|++||.+|+++|+||++||++. .|+...+|.|+ +++ +++|+.+++|+||
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~~~Yt 102 (279)
T 3i3n_A 25 EQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIEYMYT 102 (279)
T ss_dssp HHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHHhhCc
Confidence 3788999999999998 9999999999999999999999975 67777899998 554 7999999999999
Q ss_pred ceeEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhhccchhhHHHHHhcccchHhhhhhhcchhhHHHHHHHh
Q 007148 91 MTVTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRSVDSIASK 170 (616)
Q Consensus 91 ~~i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~sw~dsi~~L~~C~~L~~~Ae~~~Iv~rCidsLA~k 170 (616)
|++.++..||..++.||++|||++ |+..|+.||.+.+ ...||..++.+|+.+++ +.|..+
T Consensus 103 g~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~-----~~L~~~ 162 (279)
T 3i3n_A 103 GRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKL---------HLSNCVAIHSLAHMYTL-----SQLALK 162 (279)
T ss_dssp SEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC---------CTTTHHHHHHHHHHTTC-----HHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcC---------CcchHHHHHHHHHHcCc-----HHHHHH
Confidence 999999999999999999999985 8899999999988 45899999999999983 344443
Q ss_pred hccCCCCccccccccCCCCCCcccccccccccccccCCCCchhhhcccCChHHHHHHHHHHHhcCC--CCchhHHHHHHH
Q 007148 171 TSVDPANVTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDIDLYKRVMIAVKSKGR--MDGSVIGEALRI 248 (616)
Q Consensus 171 A~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~id~~~rVI~amks~g~--~~~e~I~~aL~~ 248 (616)
|.. |. .+ ++...+-.+++..|+.+. +...+++..+ .+++.|.++++.
T Consensus 163 ~~~--------~i------------------~~--~f~~v~~~~~f~~L~~~~---l~~lL~~d~L~v~sE~~vf~av~~ 211 (279)
T 3i3n_A 163 AAD--------MI------------------RR--NFHKVIQDEEFYTLPFHL---IRDWLSDLEITVDSEEVLFETVLK 211 (279)
T ss_dssp HHH--------HH------------------HH--THHHHTTSSGGGGSCHHH---HHHHHTCSSCCCSCHHHHHHHHHH
T ss_pred HHH--------HH------------------HH--HHHHHhcCcChhcCCHHH---HHHHhcCcCCCCCCHHHHHHHHHH
Confidence 322 11 00 112223357889999998 5555555543 457789999999
Q ss_pred HHHhhcCCccccccchhhhhhh---HHHHHHHHHhcCCCCCcccChHHHHHHHhhhhhccCCHHHHHHHHHHH
Q 007148 249 YAVRWLPDSIDALVSDAQTLRN---KCLVETIVCLLPTDKSVGCSCSFLLKLLKVSVLVGVDNSAREDLVKRI 318 (616)
Q Consensus 249 Ya~r~L~~~~~~~~~~~~~~~~---r~LLEtIv~LLP~ek~s~vsc~FL~~LLR~A~~l~as~~cr~~LEkrI 318 (616)
|+++..+ .++ ..|++.| ++ | . +|..+|..+++...++..++.|+..|..-.
T Consensus 212 W~~~~~~------------~r~~~~~~ll~~V-Rf-~----l-~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 212 WVQRNAE------------ERERYFEELFKLL-RL-S----Q-MKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp HHHTTHH------------HHTTTHHHHHTTS-CG-G----G-SCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred HHHcCHH------------HHHHHHHHHHHhc-CC-C----C-CCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 9997643 121 2455554 55 5 5 999999999999999999999998876543
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.83 E-value=4.7e-21 Score=167.95 Aligned_cols=103 Identities=28% Similarity=0.336 Sum_probs=92.1
Q ss_pred eeccCCceeEEEEECC----EEEEecCcccccCCHHHHHhhcCC-ccCCCCceeecCCCCCHHHHHHHHHHhcCceeEee
Q 007148 22 YVTSELATDVIINVGE----VKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFS 96 (616)
Q Consensus 22 ~~~~~~~~DV~I~Vg~----~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It 96 (616)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||... .|+. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5678999999999998 999999999999999999999975 5555 889999987 7999999999999999999
Q ss_pred cccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhh
Q 007148 97 AYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (616)
Q Consensus 97 ~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v 133 (616)
..||..++.+|++++|++ |...|+.||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999995 8899999998764
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.83 E-value=3.5e-21 Score=181.06 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=112.5
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-ccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
+++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .+....+|.|++++ +++|+.+++|+||+++.++..|
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~ 104 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 104 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHH
Confidence 47788999999999999999999999999999999999974 66677899999987 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHHhhhccchhhHHHHHhcccchHhhhhhhcc
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKI 159 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~sw~dsi~~L~~C~~L~~~Ae~~~I 159 (616)
+..++.+|++|+|++ |...|+.||.+.+ ...||..++.+|+.+++
T Consensus 105 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 105 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 149 (172)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCcHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc
Confidence 999999999999985 8899999999988 45899999999999873
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.82 E-value=1.1e-21 Score=179.64 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=92.6
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-ccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .+.....|.|++++ +++|+.+++|+||+++.++..|
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~ 95 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 95 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHH
Confidence 47788999999999999999999999999999999999974 45555789999987 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHHhhhccchhhHHHHHhcccchHhhhhhhcc
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKI 159 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~sw~dsi~~L~~C~~L~~~Ae~~~I 159 (616)
+..++.+|++|+|++ |...|+.||.+.+ ...||..++.+|+.|++
T Consensus 96 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 96 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred HHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 999999999999985 8899999999988 56899999999999874
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.82 E-value=8.1e-21 Score=169.67 Aligned_cols=102 Identities=25% Similarity=0.240 Sum_probs=92.2
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-ccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .+.....|.|++++ +++|+.+++|+||+++.++..|
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~ 95 (120)
T 2if5_A 18 EQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTAN 95 (120)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGG
T ss_pred HHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHH
Confidence 36788999999999999999999999999999999999975 56667889999987 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHH
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~ 130 (616)
+..++.||++|+|++ |++.|++||+
T Consensus 96 ~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 96 VGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 999999999999995 8899999984
No 7
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=4.3e-21 Score=172.06 Aligned_cols=101 Identities=18% Similarity=0.129 Sum_probs=91.4
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccH
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV 100 (616)
.++.+|.+|||+|.|||+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+||+++.++.+||
T Consensus 17 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v 91 (119)
T 3b84_A 17 KQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNR 91 (119)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHH
Confidence 367889999999999999999999999999999999998743 4689999987 79999999999999999999999
Q ss_pred HHHHHhhhccCcchhcccccHHHHHHHHHHhh
Q 007148 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (616)
Q Consensus 101 ~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~ 132 (616)
..++.||++|||++ |.+.|++||.+.
T Consensus 92 ~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 92 DQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 99999999999985 889999999764
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.82 E-value=9.8e-21 Score=168.37 Aligned_cols=100 Identities=21% Similarity=0.335 Sum_probs=91.0
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeec--CCCCCHHHHHHHHHHhcCceeEeecc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV--DFPGGPKAFEICAKFCYGMTVTFSAY 98 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~--d~pgGa~aFelv~~FcYg~~i~It~~ 98 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+||+++.++..
T Consensus 15 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~~~~ 89 (116)
T 2vpk_A 15 KQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTLNLDSW 89 (116)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCcccCHH
Confidence 36788999999999999999999999999999999999875 24578887 887 799999999999999999999
Q ss_pred cHHHHHHhhhccCcchhcccccHHHHHHHHHHh
Q 007148 99 NVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNS 131 (616)
Q Consensus 99 NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~ 131 (616)
||..++.||++|||++ |++.|++||.+
T Consensus 90 ~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 90 NVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 9999999999999984 88999999863
No 9
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=1.3e-20 Score=169.22 Aligned_cols=101 Identities=23% Similarity=0.233 Sum_probs=93.4
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccH
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV 100 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ..+|.|++++ +++|+.+++|+||+++.++..|+
T Consensus 21 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~ 94 (121)
T 1buo_A 21 QMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDL 94 (121)
T ss_dssp HHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGH
T ss_pred HHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHH
Confidence 47788999999999999999999999999999999999863 4589999997 79999999999999999999999
Q ss_pred HHHHHhhhccCcchhcccccHHHHHHHHHHhhh
Q 007148 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (616)
Q Consensus 101 ~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v 133 (616)
..++.||++|+|++ |.+.|+.||.+.+
T Consensus 95 ~~ll~~A~~~~i~~------L~~~c~~~l~~~I 121 (121)
T 1buo_A 95 DDLLYAAEILEIEY------LEEQCLKMLETIQ 121 (121)
T ss_dssp HHHHHHHHHHTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCHH------HHHHHHHHHHHhC
Confidence 99999999999985 8899999998753
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.81 E-value=1.7e-20 Score=169.31 Aligned_cols=102 Identities=25% Similarity=0.404 Sum_probs=94.6
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-ccCCCCceee-cCCCCCHHHHHHHHHHhcCceeEeecc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNI-VDFPGGPKAFEICAKFCYGMTVTFSAY 98 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L-~d~pgGa~aFelv~~FcYg~~i~It~~ 98 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .| ....|.| ++++ +++|+.+++|+||+++.++..
T Consensus 22 ~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~~~~ 98 (127)
T 1r29_A 22 RLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLNLREG 98 (127)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcCcCHH
Confidence 37788999999999999999999999999999999999975 44 6678999 8887 799999999999999999999
Q ss_pred cHHHHHHhhhccCcchhcccccHHHHHHHHHHh
Q 007148 99 NVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNS 131 (616)
Q Consensus 99 NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~ 131 (616)
||..|+.||++|+|++ |...|+.||.+
T Consensus 99 ~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 99 NIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 9999999999999995 88999999975
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.81 E-value=6.3e-21 Score=174.95 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=90.4
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccH
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV 100 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+||+++.++..||
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v 92 (135)
T 2yy9_A 18 KQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNR 92 (135)
T ss_dssp HHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHH
Confidence 478899999999999999999999999999999999998643 4579999987 79999999999999999999999
Q ss_pred HHHHHhhhccCcchhcccccHHHHHHHHHHhhhc
Q 007148 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (616)
Q Consensus 101 ~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~ 134 (616)
..|+.||++|||++ |++.|++||.+.+.
T Consensus 93 ~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 93 DQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 99999999999985 88999999988763
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.80 E-value=2.1e-20 Score=171.71 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=95.3
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeec-CCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV-DFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~-d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||..... +...|.|+ +++ +++|+.+++|+||+++.++..|
T Consensus 29 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~ 105 (138)
T 2z8h_A 29 DQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDN 105 (138)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHH
Confidence 4778899999999999999999999999999999999997532 13578885 786 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHHhhhcc
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFR 135 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~ 135 (616)
|..|+.||++|||++ |++.|+.||.+.+..
T Consensus 106 v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 106 VDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp HHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 999999999999995 889999999988754
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.80 E-value=1.2e-20 Score=171.32 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=85.8
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeec-CCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV-DFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~-d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...+|.|+ +++ +++|+.+++|+||+++.++..|
T Consensus 26 ~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~ 100 (129)
T 3ga1_A 26 EQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGD 100 (129)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTT
T ss_pred HHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHH
Confidence 36778999999999999999999999999999999999865 45689996 887 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHHhh
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~ 132 (616)
|..|+.||++|||++ |++.|++||.+.
T Consensus 101 ~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 101 QDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 999999999999996 567899999875
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=1.6e-20 Score=168.33 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=90.2
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccH
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV 100 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+||+++.++..||
T Consensus 20 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~~~~~ 93 (119)
T 2q81_A 20 QQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSLSPENV 93 (119)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCccCHHHH
Confidence 36788999999999999999999999999999999999862 3578888876 79999999999999999999999
Q ss_pred HHHHHhhhccCcchhcccccHHHHHHHHHH
Q 007148 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (616)
Q Consensus 101 ~~L~cAAeyLqMte~~~~gNLi~~ce~FL~ 130 (616)
..++.||++|||++ |++.|++||.
T Consensus 94 ~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 94 DDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 99999999999995 8899999985
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.80 E-value=1.2e-20 Score=169.91 Aligned_cols=100 Identities=19% Similarity=0.245 Sum_probs=89.6
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecC-CCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVD-FPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d-~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||...... ...|.|++ ++ +++|+.+++|+||+++.++..|
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~~~ 101 (125)
T 3ohu_A 25 DQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSREN 101 (125)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCC--HHHHHHHHHHHTTSEEEECTTT
T ss_pred HHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCC--HHHHHHHHHhHcCCceEECHHH
Confidence 47788999999999999999999999999999999999975322 56889987 87 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHH
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFL 129 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL 129 (616)
|..++.||++|||++ |.+.|++||
T Consensus 102 v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 102 IREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 999999999999996 556787765
No 16
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.80 E-value=2.7e-20 Score=172.84 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=89.8
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-c--cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA 97 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~ 97 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... . +.....|.|++++ +++|+.+++|+||+++.++.
T Consensus 40 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~ 117 (144)
T 2ppi_A 40 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNE 117 (144)
T ss_dssp HTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCT
T ss_pred HHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCH
Confidence 37788999999999999999999999999999999999863 3 3566789999987 79999999999999999999
Q ss_pred ccHHHHHHhhhccCcchhcccccHHHHHHHHHH
Q 007148 98 YNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (616)
Q Consensus 98 ~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~ 130 (616)
.||..|+.||++|||++ |++.|++||.
T Consensus 118 ~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 118 DTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 99999999999999985 8899999974
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=4.8e-20 Score=166.41 Aligned_cols=94 Identities=21% Similarity=0.179 Sum_probs=84.9
Q ss_pred eeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccHH
Q 007148 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNVV 101 (616)
Q Consensus 22 ~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV~ 101 (616)
.+.+|.+|||+|.|+|+.|++||.+|+++|+||++ ....|+|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36779999999999999999999999999999984 23578999997 799999999999999999999999
Q ss_pred HHHHhhhccCcchhcccccHHHHHHHHHHh
Q 007148 102 AARCAAEYLEMTEDVDKKNLIFKLEVFLNS 131 (616)
Q Consensus 102 ~L~cAAeyLqMte~~~~gNLi~~ce~FL~~ 131 (616)
.++.||++|||++ |++.|++++.+
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999995 88999999875
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.78 E-value=3.6e-20 Score=167.15 Aligned_cols=101 Identities=21% Similarity=0.264 Sum_probs=88.7
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeec-CCCCCHHHHHHHHHHhcCceeEeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV-DFPGGPKAFEICAKFCYGMTVTFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~-d~pgGa~aFelv~~FcYg~~i~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+... +...|.|+ +++ +++|+.+++|+||+++.++..|
T Consensus 22 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~--~~~f~~lL~~iYtg~~~i~~~~ 98 (124)
T 2ihc_A 22 DQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVT--VKGFEPLIQFAYTAKLILSKEN 98 (124)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHHSEEEEETTT
T ss_pred HHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcC--HHHHHHHHHHhcCCCcccCHHH
Confidence 4778899999999999999999999999999999999997532 13578884 776 7999999999999999999999
Q ss_pred HHHHHHhhhccCcchhcccccHHHHHHHHHH
Q 007148 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (616)
Q Consensus 100 V~~L~cAAeyLqMte~~~~gNLi~~ce~FL~ 130 (616)
|..|+.||++|||++ |++.|+.||.
T Consensus 99 v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 99 VDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred HHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999996 5678998875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=4.6e-19 Score=182.64 Aligned_cols=131 Identities=19% Similarity=0.175 Sum_probs=114.3
Q ss_pred eeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCC-ccCCCCceeecCCCCCHHHHHHHHHHhcCceeEeecccH
Q 007148 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (616)
Q Consensus 22 ~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~~NV 100 (616)
++.++.+|||+|.|+|++|++||.+|+++|+||++||... .|....+|.|++++ +++|+.+++|+||+++.++..|+
T Consensus 168 l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~ 245 (312)
T 3hqi_A 168 LWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMA 245 (312)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHH
T ss_pred HHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHH
Confidence 5577899999999999999999999999999999999874 67777899999997 79999999999999999999999
Q ss_pred HHHHHhhhccCcchhcccccHHHHHHHHHHhhhccchhhHHHHHhcccchHhhhhhhc---chhhHHHHHHH
Q 007148 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLK---IIGRSVDSIAS 169 (616)
Q Consensus 101 ~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~~sw~dsi~~L~~C~~L~~~Ae~~~---Iv~rCidsLA~ 169 (616)
..|+.||++|+|+. |+..|+.||.+.+ ...||..++.+|+.|+ +..+|++-|+.
T Consensus 246 ~~ll~~A~~~~~~~------l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 246 DDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHHTTC---------CTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHH------HHHHHHHHHHccC---------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999984 8899999999988 4589999999999985 55566666654
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=2.3e-18 Score=154.17 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=82.6
Q ss_pred eeeccCCceeEEEEECCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCcee-Eeeccc
Q 007148 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTV-TFSAYN 99 (616)
Q Consensus 21 ~~~~~~~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i-~It~~N 99 (616)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...|.|++++ +++|+.+++|+||+++ .++..|
T Consensus 24 ~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~ 97 (116)
T 3fkc_A 24 EQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDL 97 (116)
T ss_dssp HHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHH
T ss_pred HHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHH
Confidence 36788999999999999999999999999999999999864 4689999997 7999999999999999 799999
Q ss_pred HHHHHHhhhccCcchh
Q 007148 100 VVAARCAAEYLEMTED 115 (616)
Q Consensus 100 V~~L~cAAeyLqMte~ 115 (616)
|..++.||++|||+..
T Consensus 98 ~~~ll~~A~~l~i~~L 113 (116)
T 3fkc_A 98 LDELIKSGQLLGVKFI 113 (116)
T ss_dssp HHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhCcccc
Confidence 9999999999999853
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.31 E-value=1.1e-12 Score=124.20 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=81.9
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcC-C-c-cCCCCceeecCCCCCHHHHHHHHHHhcCce--------------
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLK-A-S-EENSDEMNIVDFPGGPKAFEICAKFCYGMT-------------- 92 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~-~-~-e~~~~~V~L~d~pgGa~aFelv~~FcYg~~-------------- 92 (616)
|+|+. +|+.|.+|+.+ |++|+||+.||.. . . |.....|.|++|+ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77765 89999999998 9999999999986 3 3 4555789999998 599999999999887
Q ss_pred ------------eEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhhc
Q 007148 93 ------------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (616)
Q Consensus 93 ------------i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~ 134 (616)
+.|+..|+..|+.||.||+|.. |++.|+.|+...+.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8899999999999999999984 88999999999884
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.13 E-value=5.4e-11 Score=103.70 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=65.7
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcCC---ccCCCCceeecCCCCCHHHHHHHHHHhc-----C---ceeE---e
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKA---SEENSDEMNIVDFPGGPKAFEICAKFCY-----G---MTVT---F 95 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~V~L~d~pgGa~aFelv~~FcY-----g---~~i~---I 95 (616)
|+|+- +|+.|.+||.+ |++|+||++||+.. .|.....|.|++++ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 78999999999 99999999999862 35556789999998 599999999999 5 6777 9
Q ss_pred ecccHHHHHHhhhccCc
Q 007148 96 SAYNVVAARCAAEYLEM 112 (616)
Q Consensus 96 t~~NV~~L~cAAeyLqM 112 (616)
+++|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999983
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.99 E-value=3.3e-10 Score=105.30 Aligned_cols=92 Identities=11% Similarity=0.119 Sum_probs=81.3
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCce-----------------
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT----------------- 92 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~----------------- 92 (616)
|+|+. +|+.|.+|+.+ |..|+||+.||.... ...|.|++|+ +.+++.+++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 88999999998 899999999998632 3579999998 599999999999755
Q ss_pred ---------eEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhhc
Q 007148 93 ---------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (616)
Q Consensus 93 ---------i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~ 134 (616)
+.++..++..|+.||.||+|. .|++.|+.|+...+-
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~------~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIK------GLLDVTCKTVANMIK 122 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCH------HHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHc
Confidence 778999999999999999998 489999999999883
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.82 E-value=4.5e-10 Score=106.48 Aligned_cols=92 Identities=13% Similarity=0.203 Sum_probs=50.7
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCce-----------------
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT----------------- 92 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~----------------- 92 (616)
|+|+. +|+.|.+|+.+ |..|+||+.||.... ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 89999999998 899999999998642 23479999998 499999999999875
Q ss_pred ----------eEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhh
Q 007148 93 ----------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (616)
Q Consensus 93 ----------i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v 133 (616)
+.++..++..|+.||.||+|. .|++.|+.|+...+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~------~Lldl~c~~vA~~i 125 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIK------NLLDLTCQTVADMI 125 (160)
T ss_dssp --------------------CHHHHHHTTCH------HHHHHHHHHHHHTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHHH
Confidence 578999999999999999998 48999999999988
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.26 E-value=8.2e-07 Score=77.78 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=66.5
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcCCccCCCCceeecCCCCCHHHHHHHHHHhcCce--------------eEe
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT--------------VTF 95 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~--------------i~I 95 (616)
|+|+- +|+.|.+|+.+ |..|++|+.|+...-+.....|.|++++ +.+++.+++|||.-+ ..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 66766 89999999996 8999999999986334444689999998 499999999999643 367
Q ss_pred ecccHHHHHHhhhccCc
Q 007148 96 SAYNVVAARCAAEYLEM 112 (616)
Q Consensus 96 t~~NV~~L~cAAeyLqM 112 (616)
....+..|+.||.||++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88899999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.21 E-value=8.8e-07 Score=77.09 Aligned_cols=79 Identities=13% Similarity=0.200 Sum_probs=64.2
Q ss_pred EEEEE-CCEEEEecCcccccCCHHHHHhhcCC---ccCCCCceeecCCCCCHHHHHHHHHHhcCce-----------eEe
Q 007148 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKA---SEENSDEMNIVDFPGGPKAFEICAKFCYGMT-----------VTF 95 (616)
Q Consensus 31 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~-----------i~I 95 (616)
|+|+- +|+.|.+|+.+ |..|++|+.|+... .|.....|.|++++ +.+++.+++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 89999999996 89999999999863 24444689999998 499999999999643 468
Q ss_pred ecccHHHHHHhhhccCc
Q 007148 96 SAYNVVAARCAAEYLEM 112 (616)
Q Consensus 96 t~~NV~~L~cAAeyLqM 112 (616)
....+..|+.||.||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.16 E-value=1.6e-06 Score=82.86 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=76.2
Q ss_pred eEEEEE-CCEEEEecCcccccCCHHHHHhhcCCcc-----CCCCceeecCCCCCHHHHHHHHHHhcCce-----------
Q 007148 30 DVIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASE-----ENSDEMNIVDFPGGPKAFEICAKFCYGMT----------- 92 (616)
Q Consensus 30 DV~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~e-----~~~~~V~L~d~pgGa~aFelv~~FcYg~~----------- 92 (616)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++|+ +.+++.|+.|||-.+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466655 88999999997 8889999999986321 223679999998 499999999998532
Q ss_pred --------------eEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhh
Q 007148 93 --------------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (616)
Q Consensus 93 --------------i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v 133 (616)
+.+....+..|+.||.||+|.. |++.|+.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 3577788999999999999984 8899999998876
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.53 E-value=4.9e-05 Score=68.03 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=63.1
Q ss_pred EEEE-ECCEEEEecCcccccCCHHHHHhhcCC---ccCCCCceeecCCCCCHHHHHHHHHHhcCce-----------eEe
Q 007148 31 VIIN-VGEVKFYLHKFPLLSKSNRLHRLVLKA---SEENSDEMNIVDFPGGPKAFEICAKFCYGMT-----------VTF 95 (616)
Q Consensus 31 V~I~-Vg~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~V~L~d~pgGa~aFelv~~FcYg~~-----------i~I 95 (616)
|+|+ -+|+.|.+++. .|..|+.++.|+... .+.....|.|++|+ +.+++.|++|||--+ ..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 5665 48999999999 578899999999853 23334589999998 499999999998532 468
Q ss_pred ecccHHHHHHhhhccCc
Q 007148 96 SAYNVVAARCAAEYLEM 112 (616)
Q Consensus 96 t~~NV~~L~cAAeyLqM 112 (616)
...++..|+.||.||++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.35 E-value=0.00047 Score=60.85 Aligned_cols=92 Identities=20% Similarity=0.195 Sum_probs=70.4
Q ss_pred eEEEEECCEEEEecCcccccCC-HHHHHhhcCCc-----cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHH
Q 007148 30 DVIINVGEVKFYLHKFPLLSKS-NRLHRLVLKAS-----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVA 102 (616)
Q Consensus 30 DV~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~-----e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~ 102 (616)
=|+|.|||+.|...+..|.... .+|.+||.... .....++-| |- .|+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 3788999999999999999885 57899987531 112345555 33 479999999999999988743 34578
Q ss_pred HHHhhhccCcchhcccccHHHHHHHHHH
Q 007148 103 ARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (616)
Q Consensus 103 L~cAAeyLqMte~~~~gNLi~~ce~FL~ 130 (616)
++..|+|+++++ |+..|++-+.
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHh
Confidence 999999999986 6777776544
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.84 E-value=0.0023 Score=55.87 Aligned_cols=76 Identities=7% Similarity=-0.013 Sum_probs=54.7
Q ss_pred HHhcccchHhhhhhhcchhhHHHHHHHhhccCCCCccccccccCCCCCCcccccccccccccccCCCCchhhhcccCChH
Q 007148 143 VLQTTKSLLPWSEDLKIIGRSVDSIASKTSVDPANVTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDID 222 (616)
Q Consensus 143 ~L~~C~~L~~~Ae~~~Iv~rCidsLA~kA~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~id 222 (616)
.+.||.+++.+|+.|+ | ..|..+|.. |. . .++......+||..|+.+
T Consensus 9 ~~~NCl~i~~~A~~~~----~-~~L~~~a~~--------fi------------------~--~nF~~v~~~~eFl~L~~~ 55 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHS----D-PELYTAAKH--------CA------------------K--THLAQLQNTEEFLHLPHR 55 (105)
T ss_dssp CTTTHHHHHHHHHHTT----C-HHHHHHHHH--------HH------------------H--HTCHHHHTSHHHHHSCHH
T ss_pred CHHHHHHHHHHHHHcC----C-HHHHHHHHH--------HH------------------H--HHHHHHHhcccHhhCCHH
Confidence 4689999999999998 4 667766643 22 1 123334456899999999
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHHhhcC
Q 007148 223 LYKRVMIAVKSKGRMDGSVIGEALRIYAVRWLP 255 (616)
Q Consensus 223 ~~~rVI~amks~g~~~~e~I~~aL~~Ya~r~L~ 255 (616)
....+ +.++ ..+++.|++|++.|+++...
T Consensus 56 ~L~~l---L~sd-v~~E~~vf~av~~Wv~~d~~ 84 (105)
T 2eqx_A 56 LLTDI---ISDG-VPCSQNPTEAIEAWINFNKE 84 (105)
T ss_dssp HHHHH---HHTC-EETTSCHHHHHHHHHHTTHH
T ss_pred HHHHH---HcCC-CCCHHHHHHHHHHHHHcCHH
Confidence 85444 4444 56788899999999987653
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.39 E-value=0.03 Score=54.95 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=70.4
Q ss_pred eEEEEECCEEEEecCcccccCC-HHHHHhhcCCcc-----CCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHH
Q 007148 30 DVIINVGEVKFYLHKFPLLSKS-NRLHRLVLKASE-----ENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVA 102 (616)
Q Consensus 30 DV~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~e-----~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~ 102 (616)
=|+|.|||+.|...+..|...- .+|.+||....+ ....++-|. - .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998874 488999874311 123456553 2 358999999999999998743 34467
Q ss_pred HHHhhhccCcchhcccccHHHHHHHHHHhh
Q 007148 103 ARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (616)
Q Consensus 103 L~cAAeyLqMte~~~~gNLi~~ce~FL~~~ 132 (616)
++.-|+|+++++ |+..|..-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999985 777777766543
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.54 E-value=0.013 Score=52.43 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=62.5
Q ss_pred EEEEECCEEEEecCcccccCC-HHHHHhhcCCc--cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHHHHHh
Q 007148 31 VIINVGEVKFYLHKFPLLSKS-NRLHRLVLKAS--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAARCA 106 (616)
Q Consensus 31 V~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~--e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~L~cA 106 (616)
|+|.|||+.|...+..|...- ..|.+|+.... .....++-|. = .|..|..|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-R--dp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-R--HPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-S--CTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-c--ChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 789999999999999998763 34666766421 2234566663 2 358999999999999988754 357889999
Q ss_pred hhccCcchh
Q 007148 107 AEYLEMTED 115 (616)
Q Consensus 107 AeyLqMte~ 115 (616)
|+|+++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999975
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.13 E-value=0.12 Score=45.05 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=58.4
Q ss_pred EEEEECCEEEEecCcccccCC-HHHHHhhcCC--ccCCCCceeecCCCCCHHHHHHHHHHhcC-ceeEeec-ccHHHHHH
Q 007148 31 VIINVGEVKFYLHKFPLLSKS-NRLHRLVLKA--SEENSDEMNIVDFPGGPKAFEICAKFCYG-MTVTFSA-YNVVAARC 105 (616)
Q Consensus 31 V~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~--~e~~~~~V~L~d~pgGa~aFelv~~FcYg-~~i~It~-~NV~~L~c 105 (616)
|+|.|||+.|...+..|...- ..|.+|+... -.....++-|.- .|..|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDR---dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDR---NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECS---CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcC---ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999999886552 2344444321 122345666632 24899999999997 8987633 34678999
Q ss_pred hhhccCcchh
Q 007148 106 AAEYLEMTED 115 (616)
Q Consensus 106 AAeyLqMte~ 115 (616)
-|+|.++++.
T Consensus 80 Ea~fy~i~~~ 89 (100)
T 1t1d_A 80 EIKFYELGEN 89 (100)
T ss_dssp HHHHTTCCHH
T ss_pred HHHHcCCCHH
Confidence 9999999974
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.51 E-value=0.12 Score=46.75 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=57.8
Q ss_pred eEEEEECCEEEEecCcccccCCHHHHHhhcCC-c----cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHHH
Q 007148 30 DVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAA 103 (616)
Q Consensus 30 DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~L 103 (616)
=|+|.|||+.|..-+..|...-+- |+... + .....++-|. -.|..|+.|++|.-+|++.+.. -.+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEEC---SCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEEc---CChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 378899999999999888655321 22221 1 1223455553 3479999999999999988643 257889
Q ss_pred HHhhhccCcchh
Q 007148 104 RCAAEYLEMTED 115 (616)
Q Consensus 104 ~cAAeyLqMte~ 115 (616)
+.-|+|+++++.
T Consensus 88 ~~Ea~fy~i~~l 99 (124)
T 1s1g_A 88 DDELAFYGILPE 99 (124)
T ss_dssp HHHHHHTTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999975
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=89.94 E-value=0.17 Score=46.77 Aligned_cols=81 Identities=14% Similarity=0.200 Sum_probs=58.5
Q ss_pred eeEEEEECCEEEEecCcccccCCHHHHHhhcCC-c----cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHH
Q 007148 29 TDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVA 102 (616)
Q Consensus 29 ~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~ 102 (616)
.=|+|.|||+.|...+..|...-+- |+... + .....++-|. -.|..|+.|++|.-+|++.+.. -.+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 4478899999999999888654321 22221 1 1233456553 3479999999999999988643 34788
Q ss_pred HHHhhhccCcchh
Q 007148 103 ARCAAEYLEMTED 115 (616)
Q Consensus 103 L~cAAeyLqMte~ 115 (616)
++.-|+|+++++.
T Consensus 109 l~eEa~fy~i~~l 121 (140)
T 2nz0_B 109 YDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999975
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=89.81 E-value=0.1 Score=45.76 Aligned_cols=79 Identities=11% Similarity=0.186 Sum_probs=56.7
Q ss_pred EEEEECCEEEEecCcccccCCHHHHHhhcCC-c----cCCCCceeecCCCCCHHHHHHHHHHhcCceeEeec-ccHHHHH
Q 007148 31 VIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAAR 104 (616)
Q Consensus 31 V~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~V~L~d~pgGa~aFelv~~FcYg~~i~It~-~NV~~L~ 104 (616)
|+|.|||+.|...+..|...-+- |+... + .....++-|.- .|+.|+.|++|.-+|++.+.. -.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999999888655321 22221 1 11234555532 358999999999999987643 3578899
Q ss_pred HhhhccCcchh
Q 007148 105 CAAEYLEMTED 115 (616)
Q Consensus 105 cAAeyLqMte~ 115 (616)
.-|+|+++++.
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999974
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=62.39 E-value=1.6 Score=28.97 Aligned_cols=16 Identities=38% Similarity=0.399 Sum_probs=14.0
Q ss_pred ccHHHHHHhhhccCcc
Q 007148 98 YNVVAARCAAEYLEMT 113 (616)
Q Consensus 98 ~NV~~L~cAAeyLqMt 113 (616)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999844
No 38
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=48.03 E-value=12 Score=33.06 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=23.4
Q ss_pred hcCCCCCChhhHHHHHhhcCCCCcccchhHHHHHHHHHhhCCC
Q 007148 398 IAHDPNLTLASFIDLSQSIPESARPIHDGLYKAIDSYLKEHPD 440 (616)
Q Consensus 398 iA~D~nL~~skF~~Lae~lP~~aR~~hDgLYrAIDiYLk~Hp~ 440 (616)
...|.+.++.++.+.+ .++++|||-||-+||.
T Consensus 91 ~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 91 KVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp ESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred ECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 3456677777776654 7889999999999984
No 39
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=45.10 E-value=12 Score=41.26 Aligned_cols=83 Identities=12% Similarity=0.094 Sum_probs=56.9
Q ss_pred eEEEEECCEEEEecCcccccCCH-HHHHhhcCC--ccCCCCceeecCCCCCHHHHHHHHHHhcC-ceeEeec-ccHHHHH
Q 007148 30 DVIINVGEVKFYLHKFPLLSKSN-RLHRLVLKA--SEENSDEMNIVDFPGGPKAFEICAKFCYG-MTVTFSA-YNVVAAR 104 (616)
Q Consensus 30 DV~I~Vg~~~F~lHK~vLas~S~-yfr~lf~~~--~e~~~~~V~L~d~pgGa~aFelv~~FcYg-~~i~It~-~NV~~L~ 104 (616)
=|+|.|||+.|...+..|...-+ .+-+++... -+....++-+. -.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~D---R~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFD---RNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEEC---SCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEc---CChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46789999999999888764421 111222211 12234566663 347999999999998 9987633 2466789
Q ss_pred HhhhccCcchh
Q 007148 105 CAAEYLEMTED 115 (616)
Q Consensus 105 cAAeyLqMte~ 115 (616)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 99999999975
No 40
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=35.19 E-value=36 Score=28.52 Aligned_cols=43 Identities=14% Similarity=0.256 Sum_probs=33.5
Q ss_pred CccccHHHHHHHHHHHHhccCCCCcCCCCCCCCCCCCCcccCcchHHHHHHHHHHHHhHh
Q 007148 339 TACYDVELVQCIVNEYLMHEKPSRALGDVGWNEKGPDDFVLGHGSLLAVGKLINGYLAEI 398 (616)
Q Consensus 339 ~~~yDvd~V~riv~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 398 (616)
+..++.+++.||+..+...... ..+..++..||+++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt-----------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT-----------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC-----------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc-----------------cccHHHHHHHHHHHHHHHHHH
Confidence 4578999999999987654321 235688999999999999884
No 41
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.87 E-value=39 Score=28.71 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=31.2
Q ss_pred eEeecccHHHHHHhhhccCcchhcccccHHHHHHHHHHhhhc
Q 007148 93 VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (616)
Q Consensus 93 i~It~~NV~~L~cAAeyLqMte~~~~gNLi~~ce~FL~~~v~ 134 (616)
=.|+++|...++..|+.++.++ |..+|..|+.....
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF~ 41 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHLA 41 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCH
T ss_pred ccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHHH
Confidence 3589999999999999999884 88899999987763
No 42
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=25.88 E-value=2.5e+02 Score=22.39 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=44.7
Q ss_pred CCCCCChhhHHHHHhhcCCCCcccchhHHHHHHHHHhhCCC-CcHHHHHhhhcccc--CCCCCHHHh
Q 007148 400 HDPNLTLASFIDLSQSIPESARPIHDGLYKAIDSYLKEHPD-LTKAERKKICGLMD--VRKLTMDAS 463 (616)
Q Consensus 400 ~D~nL~~skF~~Lae~lP~~aR~~hDgLYrAIDiYLk~Hp~-lse~Er~~lC~~md--c~KLS~eAc 463 (616)
.|..+....|+.+...- ....+.+.+|.+.|=+.+-+ |+..|-+++++.+. ..+++.+.+
T Consensus 21 ~~g~i~~~eF~~~~~~~----~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~ 83 (109)
T 3fs7_A 21 AADSFNYKSFFSTVGLS----SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAET 83 (109)
T ss_dssp STTCCCHHHHHHHHTCT----TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHH
T ss_pred CCCcCcHHHHHHHHhcC----CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHH
Confidence 68899999999987653 34566788888877666655 99999998888774 456666543
No 43
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=22.85 E-value=54 Score=27.66 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=33.0
Q ss_pred CccccHHHHHHHHHHHHhccCCCCcCCCCCCCCCCCCCcccCcchHHHHHHHHHHHHhHh
Q 007148 339 TACYDVELVQCIVNEYLMHEKPSRALGDVGWNEKGPDDFVLGHGSLLAVGKLINGYLAEI 398 (616)
Q Consensus 339 ~~~yDvd~V~riv~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 398 (616)
+..+..++|.||+..+...+. ...+..++..|++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~k-----------------TkIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDK-----------------TKVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTT-----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCC-----------------ccccHHHHHHHHHHHHHHHHHH
Confidence 567899999999997665432 1236689999999999999874
Done!