BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007151
(616 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 539
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/508 (82%), Positives = 459/508 (90%), Gaps = 1/508 (0%)
Query: 11 GSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIK 70
GS+ V GG+RKNPTLIC PIM +SVDKM++++ KA +GADLVEIRLD LK FN ++IK
Sbjct: 20 GSRGV-GGLRKNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIK 78
Query: 71 TLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIR 130
TLI SP+PTLFTYRP WEGG+YDGDENER+D LRLAMELGADYIDVEL+VA +FNDSIR
Sbjct: 79 TLITRSPLPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIR 138
Query: 131 GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV 190
G KP KCKVIVSSHNY TPSVEDL NLVA IQA+GADIVK ATTALDITDVAR+FQITV
Sbjct: 139 GNKPAKCKVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITV 198
Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMG 250
HSQVPIIG+VMGERGLISRILCAKFGG+LTFGTLE+GIVSAPGQP IKDLLDLYNFRQ+G
Sbjct: 199 HSQVPIIGIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIG 258
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSC 310
PDTKV+GIIGKPVGHSKSP+LYNEAFKSVGFNGV+VHLLVDDIA F QT+SS DFAGFSC
Sbjct: 259 PDTKVYGIIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSC 318
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKEAAV CCD +D+VA+SIGAVNCIIRRQ DGKLFGYNTDY GAI+AIE+GLR N
Sbjct: 319 TIPHKEAAVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGLRVSQN 378
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+SG S LAGKLFVVIGAGGAGKALAYGAK KGA+VVIANRTY+RA+ LA+ VGG A++
Sbjct: 379 ISGAADSPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIA 438
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
LADL NF PE GM+LANTTSIGMQPKV+ETPIPKHAL +Y+LVFDAVYTPKITRLLREAE
Sbjct: 439 LADLGNFRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAE 498
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
ESGA VSGLEMFIGQAYEQ+E FTGLP
Sbjct: 499 ESGAATVSGLEMFIGQAYEQFENFTGLP 526
>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 538
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/504 (82%), Positives = 457/504 (90%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
SGG+R+NPTLIC PIM +SVDKM + M +A + GADLVEIRLD LK+FNP +IKTLI
Sbjct: 23 SGGVRRNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILH 82
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
SP+PTLFTYRP+WEGGQY+GDE R+D LRLAMELGADYIDVEL+VA EFN+ +RG KP
Sbjct: 83 SPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPG 142
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
KCK+IVSSHNY+ TPSVE+L NLVARIQA+GADIVK ATTALDI+DVAR+FQITVHSQVP
Sbjct: 143 KCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQVP 202
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
IIGLVMGERGLISRILCAKFGG+LTFGTLE+G+VSAPGQPTIKDLLDLYNFR +GPDTKV
Sbjct: 203 IIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTKV 262
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
FGIIGKPVGHSKSP+L+NEAFKSVG NGV+VHLLVDDIA+F QTYSS DFAGFSCTIPHK
Sbjct: 263 FGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIPHK 322
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A KCCDEV VAKSIGAVNCIIRRQ+DGKLFGYNTDYVGAISAIE+GLR NVS V
Sbjct: 323 EDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVSNTV 382
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RA+ LA+ +GG A++LADLE
Sbjct: 383 GSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLADLE 442
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
NF+PEDGMILANTTSIGMQPKVDETP+ K+AL Y+LVFDAVYTPKITRLLREAEESGA
Sbjct: 443 NFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEESGAK 502
Query: 496 IVSGLEMFIGQAYEQYERFTGLPG 519
IV+GLEMFIGQAYEQ+ERFT LP
Sbjct: 503 IVTGLEMFIGQAYEQFERFTELPA 526
>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 522
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/520 (80%), Positives = 462/520 (88%), Gaps = 8/520 (1%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
SGGM KN TLICVPIMGE+++KMVVDM KA SGADLVE+RLD LK FNPR++++ LI++
Sbjct: 3 SGGMSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRK 62
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
P+PTLFTYRP WEGGQY+GDEN R D LRLAMELGADY+D+EL+VA EF +SI G+KPE
Sbjct: 63 CPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPE 122
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV- 194
K KVIVSSHNYQ TPSVEDL NLV IQA+GADIVK ATTAL+ITDVAR+FQITVHSQV
Sbjct: 123 KFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182
Query: 195 --PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
P+IGLVMGERGLISRILC KF G+LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPD
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPD 242
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
TKVFG+IGKPV HSKSP LYNEAFKSVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTI
Sbjct: 243 TKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTI 302
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKEAA+KCCDEV VAKSIGAVNCIIRR SDGKLFGYNTDYVGAISAIEDGLR +S
Sbjct: 303 PHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKIS 362
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY RARELA+ VGG ALSLA
Sbjct: 363 STSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLA 422
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
DL NF+PE+GMILANTTSIGMQPKVDETPI KHAL +Y+LVFDA+YTPKITRLLREA+ES
Sbjct: 423 DLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQES 482
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNAP-HLYKFFV 531
GATIV+GLEMFIGQAYEQ+ERFTGLP AP L+K F+
Sbjct: 483 GATIVTGLEMFIGQAYEQFERFTGLP----APKELFKQFI 518
>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
regia]
Length = 508
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/496 (82%), Positives = 445/496 (89%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+C PIM ESVDKMV++M KA ADLVEIRLD LK+FNP ++KT+IK SP+PTLFT
Sbjct: 1 TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGGQYDGDE +R+D LRLAME GADYIDVELQVA EFNDSI G+KPE KVIVSS
Sbjct: 61 YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNYQ TPS EDL NLVARIQA+GADIVK ATTAL+I DVAR+FQITVHSQVPIIG+VMGE
Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
RG +SRILC KFGGFLTFGT+E+GIVSAPGQPT+KDLL LYN R++GPDTKVFGIIGKPV
Sbjct: 181 RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
HSKSPILYNEAFKSV FNGV++ LLVDDIA F QTYSS DFAGFSCTIPHKEAA+KCCD
Sbjct: 241 HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALKCCD 300
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
EVD VAKSIGAVNCIIRR +DGKL GYNTDYVGAISAIEDGLRG N S S LAGKL
Sbjct: 301 EVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADSPLAGKL 360
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
FVVIGAGGAGKALAYGAK KGARVVIANRTYDRARELA+T+GG ALSLADL+NF+PEDGM
Sbjct: 361 FVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPEDGM 420
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN+TSIGMQPKVDETPIPKHAL Y+LVFDAVYTPK+TRLLREAEESGA IV+GLEMF
Sbjct: 421 ILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLEMF 480
Query: 504 IGQAYEQYERFTGLPG 519
IGQAYEQ+ERFTGLP
Sbjct: 481 IGQAYEQFERFTGLPA 496
>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Fagus sylvatica]
Length = 536
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/530 (77%), Positives = 460/530 (86%), Gaps = 17/530 (3%)
Query: 1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
M+S N+L+AS S ++ G +RKNPTL+C PIM ESVDKMV++M KA GADLVEIRL
Sbjct: 1 MDSTNVLLASSSASLQIGGGEIRKNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRL 60
Query: 58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
D LK+FNP ++KTLIKE P+PTLFTYRP WEGGQYDGDE +R+D LRLAME GADYIDV
Sbjct: 61 DSLKSFNPNGDLKTLIKECPLPTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDV 120
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
ELQVA+EFN+SI GKKPE KVIVSSHNYQ TPSVEDL NLVARIQA+GADIVKFATTAL
Sbjct: 121 ELQVAQEFNESIYGKKPEMFKVIVSSHNYQNTPSVEDLGNLVARIQATGADIVKFATTAL 180
Query: 178 DITDVARVFQITVHSQV---PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 234
+ITDVAR+FQI VHSQV PII +VMGERG ISRILC KFGGFL+FGT+E+GIVSAPGQ
Sbjct: 181 EITDVARIFQIIVHSQVSSVPIIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQ 240
Query: 235 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 294
P +KDLL LYNFRQ+GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGV+V ++
Sbjct: 241 PIMKDLLHLYNFRQIGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LS 294
Query: 295 KFFQTYSSND-----FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFG 349
+ S D FAGFS TIPHKEAA+KCCDEVD VAKSIGAVNCI+RR +DGK+FG
Sbjct: 295 WWMTCKISPDLLILRFAGFSITIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFG 354
Query: 350 YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI 409
YNTDYVGAISAIEDGLRG N+S S LAGKLFVVIGAGGAGKALAYGAK KGARVVI
Sbjct: 355 YNTDYVGAISAIEDGLRGSKNISYAADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 414
Query: 410 ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH 469
ANRTY+RA+E+A+TVGG ALSLADLENF+PEDGMILANTTSIGMQPKVDETPIPKHAL
Sbjct: 415 ANRTYERAKEIADTVGGQALSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRS 474
Query: 470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
Y++VFDAVYTPKITRLLRE+EESGA IV+G+EMFIGQA+EQ+ERFTGLP
Sbjct: 475 YSVVFDAVYTPKITRLLRESEESGAIIVTGVEMFIGQAFEQFERFTGLPA 524
>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/495 (81%), Positives = 442/495 (89%), Gaps = 5/495 (1%)
Query: 38 MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDE 97
MVVDM KA SGADLVE+RLD LK FNPR++++ LI++ P+PTLFTYRP WEGGQY+GDE
Sbjct: 1 MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDE 60
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
N R D LRLAMELGADY+D+EL+VA EF +SI G+KPEK KVIVSSHNYQ TPSVEDL N
Sbjct: 61 NSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGN 120
Query: 158 LVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
LV IQA+GADIVK ATTAL+ITDVAR+FQITVHSQVP+IGLVMGERGLISRILC KF G
Sbjct: 121 LVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSG 180
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
+LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPDTKVFG+IGKPV HSKSP LYNEAFK
Sbjct: 181 YLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFK 240
Query: 278 SVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
SVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTIPHKEAA+KCCDEV VAKSIGAVNC
Sbjct: 241 SVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNC 300
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
IIRR SDGKLFGYNTDYVGAISAIEDGLR +S S LAGKLFVVIGAGGAGKALA
Sbjct: 301 IIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKALA 360
Query: 398 YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV 457
YGAK KGARVVIANRTY RARELA+ VGG ALSLADL NF+PE+GMILANTTSIGMQPKV
Sbjct: 361 YGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKV 420
Query: 458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
DETPI KHAL +Y+LVFDA+YTPKITRLLREA+ESGATIV+GLEMFIGQAYEQ+ERFTGL
Sbjct: 421 DETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGL 480
Query: 518 PGKMNAP-HLYKFFV 531
P AP L+K F+
Sbjct: 481 P----APKELFKQFI 491
>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 527
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/519 (77%), Positives = 447/519 (86%), Gaps = 4/519 (0%)
Query: 1 MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGL 60
M+SPN L S + G RKN TLICVPIMGESV+KM +D+ KA A GADLVEIRLD L
Sbjct: 1 MDSPNAL----STAPAAGSRKNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSL 56
Query: 61 KNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQ 120
K F+P ++ I+ +P LFTYRP WEGG YDGDEN+R+D LRLAMELGADYID+ELQ
Sbjct: 57 KTFDPYRDLNAFIQHRSLPLLFTYRPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQ 116
Query: 121 VAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT 180
VA EF DSIRGK K KVIVSSHNYQ TPS+EDL NLVARIQA+GADIVK ATTALDIT
Sbjct: 117 VAHEFYDSIRGKTFNKTKVIVSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDIT 176
Query: 181 DVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
DVAR+FQI VHSQVP IGLVMG+RGLISRIL AKFGG+LTFGTLE+G+VSAPGQPT+KDL
Sbjct: 177 DVARMFQIMVHSQVPFIGLVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDL 236
Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
L LYN RQ+ PDTKVFGIIGKPVGHSKSPIL+NE FKS+G NGV++ LLVDD+A F +TY
Sbjct: 237 LYLYNLRQLAPDTKVFGIIGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTY 296
Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
SS DF GFS TIPHKE A+KCCDEVD VAKSIGAVNCI+RR +DGKL GYNTDYVGAI+A
Sbjct: 297 SSTDFVGFSVTIPHKETALKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITA 356
Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
IE+GLRG+ N S S LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD AR+L
Sbjct: 357 IENGLRGKHNGSSTTISPLAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHARKL 416
Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
A +GG AL+LADL+N++PEDGMILANTTSIGMQPKVDETP+ KHAL +Y+LVFDAVYTP
Sbjct: 417 AYAIGGDALALADLDNYHPEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAVYTP 476
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
KITRLL+EAEESGATIV+GLEMF+GQAY QYE FTGLP
Sbjct: 477 KITRLLKEAEESGATIVTGLEMFMGQAYGQYENFTGLPA 515
>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
Length = 526
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/516 (76%), Positives = 446/516 (86%), Gaps = 6/516 (1%)
Query: 6 LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
L+V SG K + G MRKN TLIC PIM +SVD+M++ M KA SGADLV +R+D LK+FN
Sbjct: 3 LVVDSGVKKMEGEAMRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFN 62
Query: 65 PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVARE 124
PR +I LIK+ P+PTLFTYRP WEGGQY GDE R+D LRLAMELGADYIDVEL+ E
Sbjct: 63 PRPDIDALIKQCPLPTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDE 122
Query: 125 FNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
FN+++ G K KCK+IVSSHNY+ TPS EDL NLVARIQASGADIVKFATTA DITDVAR
Sbjct: 123 FNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVAR 182
Query: 185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
VFQITVHSQVPII +VMGE+GL+SRILC KFGG+LTFGTLE G VSAPGQPT++DLL+LY
Sbjct: 183 VFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLY 242
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
NFRQ+GPDTK+FGIIGKPV HSK P+LYNE+F+SVGFNGVF+HLLVDDIA FF+TYSS D
Sbjct: 243 NFRQLGPDTKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLD 302
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
FAGFSCTIPHKEAA+ CC E+D AK+IGAVNCIIRR DGKLFG NTDY+GAISAIE+G
Sbjct: 303 FAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRR-PDGKLFGCNTDYIGAISAIEEG 361
Query: 365 LRG-RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
L+G + ++SG S LAGKLFVVIGAGGAGKA+AYGAK KGARVVIANRTY+RARELA
Sbjct: 362 LQGSQPSISG---SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIV 418
Query: 424 VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
VG ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K AL HY LVFDAVYTPKIT
Sbjct: 419 VGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKIT 478
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
RLLREA+ESGA IV+G+EMFIGQAYEQYERFTGLP
Sbjct: 479 RLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPA 514
>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]
Length = 515
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/502 (77%), Positives = 441/502 (87%), Gaps = 4/502 (0%)
Query: 22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPT 80
N TLICVPIMGE++ KM+ D+ KA +GADLVEIRLD LK FNP +++ T +++ +P
Sbjct: 2 NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
LFTYRP WEGG Y+GDEN+R+D LRLAMEL ADYID+EL+VA +F DSIRGK K KVI
Sbjct: 62 LFTYRPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNKTKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV---PII 197
VSSHNYQ TPSVEDL NLVARIQA+GADIVK ATTA++ITDVAR+F+I VHSQV P I
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRHVPFI 181
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
GLVMG+RGLISRILCAKFGG+LTFGTLE+G+VSAPGQPT+KDLL LYNFRQ+GPDTKV+G
Sbjct: 182 GLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDTKVYG 241
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
I+GKPV HSKSPIL+NEAFK++GF+GVFV LLVDD+A F +TYSS DF GFS TIPHKEA
Sbjct: 242 IVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEA 301
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
A+KCCDEVD VAKSIGAVNC++RR +DGKL GYNTDYVGAISAIEDGLRG+ SG S
Sbjct: 302 ALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSGTAVS 361
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
LAGKLFVVIGAGGAGKALAYGAK KGAR+VIANRTYDRARELA+ +GG AL+L DL+N+
Sbjct: 362 PLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDNY 421
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
+PEDGMILANTTSIGMQPKVDETPI KHAL Y+LVFDAVYTPK+TRLL+EAEESGATIV
Sbjct: 422 HPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATIV 481
Query: 498 SGLEMFIGQAYEQYERFTGLPG 519
+GLEMFIGQAY QYE +TGLP
Sbjct: 482 TGLEMFIGQAYRQYEHYTGLPA 503
>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/501 (77%), Positives = 437/501 (87%), Gaps = 1/501 (0%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
+++N +L+CVPIM +S D M+ D KA SGADLVEIRLD LK FN + ++ TL+KE P+
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 79 PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
PTLFTYRP WEGGQYDGDENER++VLRL MELGADY+DVELQVAREF DSIRGKKPEKCK
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
VIVSSHNY+ TPS++DL LVARIQ SGADIVK ATTA DITDV+R+F I VHSQVP+IG
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
LVMGERGLISRILCAKFGG+LTF TLE GIVSAPGQPTI+DLL LYNFRQ+GPDTKV+GI
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
IGKPVGHSKSP+L+NEAFKS+ FNGV+VH LVDDI F QTYSS DFAGFSCTIPHKEAA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
K CDEVD VAKSIGAVNCI+RR DGK GYNTDYVGAISAIE+ L+G S S
Sbjct: 328 AKFCDEVDPVAKSIGAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKLQGDYTGSPLSGSP 386
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
L G+LFVVIGAGGAGKALAYGAK KGA+V+IANRTY+RA+ELA+T+GG A++LADL NF+
Sbjct: 387 LFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNNFH 446
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PED MILANTTSIGMQPKV+ETPI K AL +Y+LVFDAVYTP +TRLL++AE SGA IV+
Sbjct: 447 PEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKIVT 506
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
GLEMF+GQAYEQYERFTG+P
Sbjct: 507 GLEMFVGQAYEQYERFTGMPA 527
>gi|350537731|ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169883|gb|AAC17991.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169888|gb|AAC17993.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
Length = 545
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/535 (74%), Positives = 449/535 (83%), Gaps = 25/535 (4%)
Query: 6 LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
L+V SG K + G MRKN TLIC PIM +SVD+M++ M KA SGADLVE+R+D LK+FN
Sbjct: 3 LVVDSGVKKMEGEAMRKNQTLICAPIMADSVDQMLILMQKAKISGADLVEVRVDSLKSFN 62
Query: 65 PRENIKTLIKESPVPTLFTYR-------------------PIWEGGQYDGDENERVDVLR 105
PR +I TLIK+ P+PTLFTY P WEGGQY GDE R+D LR
Sbjct: 63 PRPDIDTLIKQCPLPTLFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSRLDALR 122
Query: 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS 165
LAMELGADYIDVEL+ EFN+++ G K KCK+IVSSHNY+ TPS EDL NLVARIQAS
Sbjct: 123 LAMELGADYIDVELKAIGEFNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQAS 182
Query: 166 GADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLE 225
GADIVKFATTA DITDVARVFQITVHSQVPII +VMGE+GL+SRILC KFGG+LTFGTLE
Sbjct: 183 GADIVKFATTAQDITDVARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLE 242
Query: 226 NGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF 285
G VSAPGQPT++DLL+LYNFRQ+GPDTK+FGIIGKPV HSKSP+LYNE+F+SVGFNGVF
Sbjct: 243 VGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVF 302
Query: 286 VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG 345
+HLLVDDIA FF+TYSS DFAGFSCTIPHKEAA+ CC E+D AK+IGAVNCIIRR DG
Sbjct: 303 MHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRR-PDG 361
Query: 346 KLFGYNTDYVGAISAIEDGLRG-RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG 404
KLFG NTDY+GAISAIE+GL+G + ++SG S LAGKLFVVIGAGGAGKA+AYGAK KG
Sbjct: 362 KLFGCNTDYIGAISAIEEGLQGSQPSISG---SPLAGKLFVVIGAGGAGKAIAYGAKEKG 418
Query: 405 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK 464
ARVVIANRTY+RARELA VG ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K
Sbjct: 419 ARVVIANRTYERARELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISK 478
Query: 465 HALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
AL HY+LVFDAVYTPKITRLLREA+ESGA IV+G+EMFIGQAYEQYERFTGLP
Sbjct: 479 EALKHYSLVFDAVYTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPA 533
>gi|449461453|ref|XP_004148456.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/501 (76%), Positives = 435/501 (86%), Gaps = 1/501 (0%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
+++N +L+CVPIM +S D M+ D KA SGADLVEIRLD LK FN + ++ TL+KE P+
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 79 PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
PTLFTYRP WEGGQYDGDENER++VLRL MELGADY+DVELQVAREF DSIRGKKPEKCK
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
VIVSSHNY+ TPS++DL LVARIQ SGADIVK ATTA DITDV+R+F I VHSQVP+IG
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
LVMGERGLISRILCAKFGG+LTF TLE GIVSAPGQPTI+DLL LYNFRQ+GPDTKV+GI
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
IGKPVGHSKSP+L+NEAFKS+ FNGV+VH LVDDI F QTYSS DFAGFSCTIPHKEAA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
K CDEVD VAK I AVNCI+RR DGK GYNTDYVGAISAIE+ L+G S S
Sbjct: 328 AKFCDEVDPVAKVIXAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKLQGDYTGSPLSGSP 386
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
L G+LFVVIGAGGAGKALAYGAK KGA+V+IANRTY+RA+ELA+T+GG A++LADL NF+
Sbjct: 387 LFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNNFH 446
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PED MILANTTSIGMQPKV+ETPI K AL +Y+LVFDAVYTP +TRLL++AE SGA IV+
Sbjct: 447 PEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKIVT 506
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
GLEMF+GQAYEQYERFTG+P
Sbjct: 507 GLEMFVGQAYEQYERFTGMPA 527
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
gi|297330413|gb|EFH60832.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
Length = 603
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/524 (74%), Positives = 450/524 (85%), Gaps = 5/524 (0%)
Query: 1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
ME N+ VAS S ++ S + KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRL
Sbjct: 68 MEHSNVYVASNSTDMEIGSQDIVKNPSLICAPVMADSIDKMVIETFKAHELGADLVEIRL 127
Query: 58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADY+DV
Sbjct: 128 DWLKDFNPIEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERQDVLRLAMELGADYVDV 187
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
ELQVA +F SI GKKPE +VIVSSHNYQ TPSVEDL++LVARIQ +GADIVK ATTA+
Sbjct: 188 ELQVASDFIKSIDGKKPESFRVIVSSHNYQNTPSVEDLNDLVARIQQTGADIVKIATTAV 247
Query: 178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
DI DVAR+F IT +Q P IGLVMGERGL+SRILC+KFGG+LTFGTL++ VSAPGQPTI
Sbjct: 248 DIADVARMFHITSSAQGPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTI 307
Query: 238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 297
KDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV F GV+VHLLVD++A F
Sbjct: 308 KDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFKGVYVHLLVDNLASFL 367
Query: 298 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 357
Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+
Sbjct: 368 QAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGS 427
Query: 358 ISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415
ISAIEDGLR G + SS LAGK VVIGAGGAGKALAYGAK KGA+VVIANRTY+
Sbjct: 428 ISAIEDGLRRSGDPSSGPSSSSPLAGKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 487
Query: 416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
RA ELAE +GG ALSL DL+NF+PEDGM+LANTTS+GMQP VDETPI KHAL HYALVFD
Sbjct: 488 RALELAEAIGGRALSLTDLDNFHPEDGMVLANTTSMGMQPNVDETPISKHALKHYALVFD 547
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
AVYTP+ITRLLREAEESGA VSG EMF+ QAYEQ+E FTGLP
Sbjct: 548 AVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPA 591
>gi|449448440|ref|XP_004141974.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/510 (74%), Positives = 432/510 (84%)
Query: 10 SGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENI 69
SG + + G+ +N TLICVPIM ES+DKM+VD+ KA +GAD+VEIRLD LK FNP E++
Sbjct: 8 SGLGIRTEGISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDL 67
Query: 70 KTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI 129
K LIKESP+PTLFTYRP WEGGQYDGDEN+R+DVLRLAM+LGADYIDVELQVAREF DSI
Sbjct: 68 KLLIKESPLPTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSI 127
Query: 130 RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT 189
+ +KP KVIVS+HNY+ TPS+EDL +LVA IQA+GADIVK ATTALDITDVAR+FQ+
Sbjct: 128 QQEKPNNFKVIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVL 187
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
V+SQVPIIGLVM +RG I R+LC K+GG+LTFGTLE GIVSAPGQPTIKDLL+LYNFR +
Sbjct: 188 VYSQVPIIGLVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHI 247
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
GPDTKVFGIIG PVG SK P LYNE FK VG + ++V LLVDD KF TYSS+D GFS
Sbjct: 248 GPDTKVFGIIGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFS 307
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKEA K CDEVD+VAK+ GAVN ++RRQSDGKL GYNTD GAISAIEDGL G
Sbjct: 308 VTIPHKEAVFKYCDEVDSVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGLLGLH 367
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
N S VSS LAGKL VVIGAGG GKA+AYGAK KGAR+VIANR++DRARELA+ VGG ++
Sbjct: 368 NDSFAVSSRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSV 427
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SLADLENF+PEDGMIL N T IGMQPKVDETPIPKHAL Y+LVFDAVYTP++TRLLREA
Sbjct: 428 SLADLENFHPEDGMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREA 487
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGLPG 519
EESGA IV GLEMF QAYEQYE FTGLP
Sbjct: 488 EESGAAIVPGLEMFTRQAYEQYEGFTGLPA 517
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
gi|75207269|sp|Q9SQT8.1|DHQSD_ARATH RecName: Full=Bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic; Short=DHQ-SDH protein;
AltName: Full=DHQase-SORase; AltName: Full=Protein
EMBRYO DEFECTIVE 3004; Includes: RecName:
Full=Dehydroquinate dehydratase; Short=DHQ; Includes:
RecName: Full=Shikimate dehydrogenase; Short=SDH; Flags:
Precursor
gi|6437552|gb|AAF08579.1|AC011623_12 putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
gi|332640860|gb|AEE74381.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/524 (74%), Positives = 447/524 (85%), Gaps = 5/524 (0%)
Query: 1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
ME N+ VAS S ++ S + KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRL
Sbjct: 68 MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127
Query: 58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct: 128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
ELQVA EF SI GKKP K KVIVSSHNYQ TPSVEDL LVARIQ +GADIVK ATTA+
Sbjct: 188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247
Query: 178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
DI DVAR+F IT +QVP IGLVMGERGL+SRILC+KFGG+LTFGTL++ VSAPGQPTI
Sbjct: 248 DIADVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTI 307
Query: 238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 297
KDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++ F
Sbjct: 308 KDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFL 367
Query: 298 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 357
Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+
Sbjct: 368 QAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGS 427
Query: 358 ISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415
ISAIEDGLR G + SS LA K VVIGAGGAGKALAYGAK KGA+VVIANRTY+
Sbjct: 428 ISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 487
Query: 416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFD
Sbjct: 488 RALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFD 547
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
AVYTP+ITRLLREAEESGA VSG EMF+ QAYEQ+E FTGLP
Sbjct: 548 AVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPA 591
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/524 (74%), Positives = 446/524 (85%), Gaps = 5/524 (0%)
Query: 1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
ME N+ VAS S ++ S + KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRL
Sbjct: 68 MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127
Query: 58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct: 128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
ELQVA EF SI GKKP K KVIVSSHNYQ TPSVEDL LVARIQ +GADIVK ATTA+
Sbjct: 188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247
Query: 178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
DI DVAR+F IT +QVP IGLVMGERGL+SRILC+KFGG+LTFGTL++ VSAPGQPTI
Sbjct: 248 DIADVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTI 307
Query: 238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 297
KDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++ F
Sbjct: 308 KDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFL 367
Query: 298 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 357
Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+
Sbjct: 368 QAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGS 427
Query: 358 ISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415
ISAIEDGLR G + SS LA K VVIGAGGAGKALAYGAK KGA+VVIANRTY+
Sbjct: 428 ISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 487
Query: 416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFD
Sbjct: 488 RALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFD 547
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
AVYTP+ITR LREAEESGA VSG EMF+ QAYEQ+E FTGLP
Sbjct: 548 AVYTPRITRQLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPA 591
>gi|397911046|gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 490
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/495 (75%), Positives = 430/495 (86%), Gaps = 11/495 (2%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
LIC P+MGESVD M+++M KA GADLVE+RLD +KNF+PR+++ TLI+E P+PTL TY
Sbjct: 1 LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP WEGG Y+GDEN+R+D LR+AMELG DYID+ELQVA EF S+ KKPEK K+IVSSH
Sbjct: 61 RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
NYQ TPSVED+ +LVARIQA+GADIVK ATTAL+ITDVAR+FQI VHSQVPIIGLVMGER
Sbjct: 121 NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GL+SR+LC KFGG+LTFG +E G +SAPGQPTIKDLLD YNFRQ+GPDTKVFG+IGKPV
Sbjct: 181 GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
SKSP+LYN AFKS+G+NGV+V LVDDIAKF +TY S DFAGFSCT+PHKEAA++ DE
Sbjct: 241 QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTYPSPDFAGFSCTMPHKEAALEYLDE 300
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
+D +AK IGAVNCI+RR SDGKL GYNTDY GAISAIEDGLR S LAGKLF
Sbjct: 301 IDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGLR----------SLLAGKLF 349
Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
VVIGAGGAGKALA+GAK KGARVVIANRT+DRA +LA+ VGG A+SL +L+NF+PEDGM+
Sbjct: 350 VVIGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPEDGMV 409
Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI 504
LANTTSIGMQPKVDETPIPK AL +Y+LVFDAVYTPK+TRLLREAEE GAT+VSGLEMFI
Sbjct: 410 LANTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFI 469
Query: 505 GQAYEQYERFTGLPG 519
QAYEQYERFTGLP
Sbjct: 470 RQAYEQYERFTGLPA 484
>gi|109157947|pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate
Dehydratase- Shikimate Dehydrogenase In Complex With
Tartrate And Shikimate
Length = 523
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/501 (76%), Positives = 435/501 (86%), Gaps = 2/501 (0%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF SI GKKP K KVI
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
VSSHNYQ TPSVEDL LVARIQ +GADIVK ATTA+DI DVAR+F IT +QVP IGLV
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MGERGL+SRILC+KFGG+LTFGTL++ VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIG
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
KPV HSKSPI++N+AFKSV FNGV+VHLLVD++ F Q YSS+DFAGFSCTIPHKEAA++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSA 378
CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR G + SS
Sbjct: 302 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
LA K VVIGAGGAGKALAYGAK KGA+VVIANRTY+RA ELAE +GG ALSL DL+N++
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
G EMF+ QAYEQ+E FTGLP
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPA 502
>gi|225451146|ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204990|emb|CBI34297.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/503 (70%), Positives = 424/503 (84%), Gaps = 2/503 (0%)
Query: 18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP 77
G+R NPTL+C P+MG +V++M+ +M KA GAD+VEIRLD L+NF+P ++++ LIK+SP
Sbjct: 17 GVRSNPTLLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSP 76
Query: 78 VPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+PTL TYRPIWEGGQY+GDEN+R D LRLAMELGA YIDVEL+VA EFN+SI GKKP+
Sbjct: 77 LPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQNF 136
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
KVIVSSHN+ TPS E + NLVARIQASGADIVK ATTALDITDVARV Q+TVHSQVP I
Sbjct: 137 KVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTI 196
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
+VMGERGLISR+L KFGG+LT+G LE G +SAPGQPT KDLLDLYNFR + PDTKV+G
Sbjct: 197 AIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYG 256
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF-AGFSCTIPHKE 316
IIGKPVGHSKSP+L+N AFK VG N V+VHLLVDD+ KFF TYS+ DF +G SCTIPHKE
Sbjct: 257 IIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKE 316
Query: 317 AAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
A+KC D +D +A+ IGA+N I+R+ DGKL +NTDY+GAI AIEDGLR S V
Sbjct: 317 VAIKCMDTIDPIARKIGAINNIVRK-PDGKLTAFNTDYIGAIEAIEDGLRESNGSSPAVG 375
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
S LAGKLFVV+GAGGAGK+LAYGAK KGARVV+ANRT++RA++LA+ VGG AL+LA++EN
Sbjct: 376 SPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAEIEN 435
Query: 437 FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI 496
F+PE+GMILANTTS+GM+PK+++TPIPKHAL HY+LVFDA+YTPK TRLLREA+ESG I
Sbjct: 436 FHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESGKII 495
Query: 497 VSGLEMFIGQAYEQYERFTGLPG 519
V G EM I Q +EQY+ FTGLP
Sbjct: 496 VYGTEMLIRQGFEQYKNFTGLPA 518
>gi|46371086|gb|AAS90325.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 1
[Nicotiana tabacum]
Length = 569
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/513 (74%), Positives = 436/513 (84%), Gaps = 4/513 (0%)
Query: 6 LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
L+V SG + + G M +N TLIC PIM ++VD+M+ M KA SGADLVE+RLD LK+FN
Sbjct: 3 LVVDSGVRKMEGEAMTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFN 62
Query: 65 PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVARE 124
P+ +I T+IK+SP+PTLFTYRP WEGGQY GDE R+D LR+AMELGADYIDVEL+ E
Sbjct: 63 PQSDIDTIIKQSPLPTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDE 122
Query: 125 FNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
FN ++ G K KCKVIVSSHNY TPS E+L NLVARIQASGADIVKFATTALDI DVAR
Sbjct: 123 FNTALHGNKSAKCKVIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVAR 182
Query: 185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
VFQITVHSQVPII +VMGE+GL+SRILC KFGG+LTFGTLE G VSAPGQPTIKDLL++Y
Sbjct: 183 VFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIY 242
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
NFRQ+GPDT++FGIIGKPV HSKSP+LYNEAF+SVGFNGV++ LLVDD+A FF+TYSS D
Sbjct: 243 NFRQLGPDTRIFGIIGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLD 302
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
FAG + TIPHKEA V CCDE++ AK IGAVNC++ R DGKLFG NTDYVGAISAIE+
Sbjct: 303 FAGSAVTIPHKEAIVDCCDELNPTAKVIGAVNCVVSRL-DGKLFGCNTDYVGAISAIEEA 361
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
L+G G S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RARELA+ V
Sbjct: 362 LQGSQPSMSG--SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVV 419
Query: 425 GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
GG ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K AL +Y+LVFDAVYTPKITR
Sbjct: 420 GGQALSLDELSNFHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITR 479
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LLREA ESG IV+G+EMFIGQAYEQYERFTGL
Sbjct: 480 LLREAHESGVKIVTGVEMFIGQAYEQYERFTGL 512
>gi|535771|gb|AAA34069.1| dehydroquinate dehydratase/shikimate dehydrogenase, partial
[Nicotiana tabacum]
Length = 579
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/513 (74%), Positives = 436/513 (84%), Gaps = 4/513 (0%)
Query: 6 LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
L+V SG + + G M +N TLIC PIM ++VD+M+ M KA SGADLVE+RLD LK+FN
Sbjct: 13 LVVDSGVRKMEGEAMTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFN 72
Query: 65 PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVARE 124
P+ +I T+IK+SP+PTLFTYRP WEGGQY GDE R+D LR+AMELGADYIDVEL+ E
Sbjct: 73 PQSDIDTIIKQSPLPTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDE 132
Query: 125 FNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
FN ++ G K KCKVIVSSHNY TPS E+L NLVARIQASGADIVKFATTALDI DVAR
Sbjct: 133 FNTALHGNKSAKCKVIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVAR 192
Query: 185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
VFQITVHSQVPII +VMGE+GL+SRILC KFGG+LTFGTLE G VSAPGQPTIKDLL++Y
Sbjct: 193 VFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIY 252
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
NFRQ+GPDT++FGIIGKPV HSKSP+LYNEAF+SVGFNGV++ LLVDD+A FF+TYSS D
Sbjct: 253 NFRQLGPDTRIFGIIGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLD 312
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
FAG + TIPHKEA V CCDE++ AK IGAVNC++ R DGKLFG NTDYVGAISAIE+
Sbjct: 313 FAGSAVTIPHKEAIVDCCDELNPTAKVIGAVNCVVSRL-DGKLFGCNTDYVGAISAIEEA 371
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
L+G G S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RARELA+ V
Sbjct: 372 LQGSQPSMSG--SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVV 429
Query: 425 GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
GG ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K AL +Y+LVFDAVYTPKITR
Sbjct: 430 GGQALSLDELSNFHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITR 489
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LLREA ESG IV+G+EMFIGQAYEQYERFTGL
Sbjct: 490 LLREAHESGVKIVTGVEMFIGQAYEQYERFTGL 522
>gi|357475825|ref|XP_003608198.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355509253|gb|AES90395.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 506
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/501 (75%), Positives = 428/501 (85%), Gaps = 16/501 (3%)
Query: 22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPT 80
N LICVPIMGE++ KM+ D+ KA +GADLVEIRLD LK FNP +++ T +++ +P
Sbjct: 2 NAMLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
LFTYRP WEGG YDGDEN+R+D L+LAMEL ADYIDVEL+VA +F DSIRGK K KVI
Sbjct: 62 LFTYRPKWEGGMYDGDENQRLDALQLAMELEADYIDVELKVAHQFYDSIRGKTYNKTKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
VSSHNYQ TPSVEDL NLVARIQA+GADIVK ATTA++ITDVAR+FQI VHSQVP IGLV
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPFIGLV 181
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MG+RGLISRILCAKFGG+LTFGTLE+G+VSAPGQPT+KDLL LYNFRQ+GP+TKVFGI+G
Sbjct: 182 MGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPNTKVFGIVG 241
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
KP ++GF+GVFV LLVDD+A F +TYSS DF GFS TIPHKEAA+K
Sbjct: 242 KP---------------TIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEAALK 286
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
CCDEVD VAKSIG VNC++RR +DGKL GYNTDYVGAISAIEDGLRG+ N SG S L
Sbjct: 287 CCDEVDPVAKSIGVVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHNDSGTAVSPLV 346
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
GKLFVVIGAGGAGKALAYGAK KGAR+VIANRTYDRARELA+ +GG AL+L DL+N++PE
Sbjct: 347 GKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDNYHPE 406
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
DGMILANTTSIGMQPKVDETPI KHAL Y+LVFDAVYTPK+TRLL+EAEESGATIV+GL
Sbjct: 407 DGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATIVTGL 466
Query: 501 EMFIGQAYEQYERFTGLPGKM 521
EMFIGQAY QYE +TGLPGK+
Sbjct: 467 EMFIGQAYRQYEHYTGLPGKL 487
>gi|160877702|pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H)
gi|160877703|pdb|2O7S|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-dehydroshikimate-sdh- Shikimate-nadp(h)
Length = 523
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/501 (76%), Positives = 434/501 (86%), Gaps = 2/501 (0%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF SI GKKP K KVI
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
VSSHNYQ TPSVEDL LVARIQ +GADIVK ATTA+DI DVAR+F IT +QVP IGLV
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MGERGL+SRILC+KFGG+LTFGTL++ VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIG
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
KPV HSKSPI++N+AFKSV FNGV+VHLLVD++ F Q YSS+DFAGFSCTIPHKEAA++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSA 378
CDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR G + SS
Sbjct: 302 XCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
LA K VVIGAGGAGKALAYGAK KGA+VVIANRTY+RA ELAE +GG ALSL DL+N++
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
G EMF+ QAYEQ+E FTGLP
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPA 502
>gi|147837952|emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
Length = 1071
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/503 (70%), Positives = 423/503 (84%), Gaps = 2/503 (0%)
Query: 18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP 77
G+R NPT +C P+MG +V++M+ +M KA GAD+VEIRLD L+NF+P ++++ LIK+SP
Sbjct: 557 GVRSNPTFLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSP 616
Query: 78 VPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+PTL TYRPIWEGGQY+GDEN+R D LRLAMELGA YIDVEL+VA EFN+SI GKKP+
Sbjct: 617 LPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQNF 676
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
KVIVSSHN+ TPS E + NLVARIQASGADIVK ATTALDITDVARV Q+TVHSQVP I
Sbjct: 677 KVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTI 736
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
+VMGERGLISR+L KFGG+LT+G LE G +SAPGQPT KDLLDLYNFR + PDTKV+G
Sbjct: 737 AIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYG 796
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF-AGFSCTIPHKE 316
IIGKPVGHSKSP+L+N AFK VG N V+VHLLVDD+ KFF TYS+ DF +G SCTIPHKE
Sbjct: 797 IIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKE 856
Query: 317 AAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
A+KC D +D +A+ IGA+N I+R+ DGKL +NTDY+GAI AIEDGLR S V
Sbjct: 857 VAIKCMDTIDPIARKIGAINNIVRK-PDGKLTAFNTDYIGAIEAIEDGLRESNGSSPAVG 915
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
S LAGKLFVV+GAGGAGK+LAYGAK KGARVV+ANRT++RA++LA+ VGG AL+LA++EN
Sbjct: 916 SPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAEIEN 975
Query: 437 FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI 496
F+PE+GMILANTTS+GM+PK+++TPIPKHAL HY+LVFDA+YTPK TRLLREA+ESG I
Sbjct: 976 FHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESGKII 1035
Query: 497 VSGLEMFIGQAYEQYERFTGLPG 519
V G EM I Q +EQY+ FTGLP
Sbjct: 1036 VYGTEMLIRQGFEQYKNFTGLPA 1058
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/529 (48%), Positives = 354/529 (66%), Gaps = 25/529 (4%)
Query: 18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP 77
G+ K T+IC P+MG+SV++MV DM KA GADLVE+RLD + NF+P+++++ +++ P
Sbjct: 5 GVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIILRNKP 64
Query: 78 VPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+P + YRP WEGGQY+GDE+ R++ L LA +LGADYID EL+VA +F + +
Sbjct: 65 LPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSS 124
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
+ IVS + TP +EDL VA +Q++GAD++K A +IT++ ++F + H Q+P+I
Sbjct: 125 RTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLI 184
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
+G+RG +S+ILC KFGGFL +G++E V+ G PT++ L + Y + + DTKVFG
Sbjct: 185 AYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVA--GLPTLESLREAYKVQYINKDTKVFG 242
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
+I KPVGHSK PIL+N AF+ V +NG++V +LVDD+ +FF YSS DFAGFS IP+KEA
Sbjct: 243 LISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEA 302
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR--LNVSGGV 375
CDE+ +A+SIGAVN I+RR SDGKL GYNTD +I+AIED LR R N +
Sbjct: 303 VTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPL 362
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY--------------------- 414
+S L GK FV++GAGGAG+ALA+GA+++GA++VI + +
Sbjct: 363 NSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFEKSIPGRITALLSNLHCSSPK 422
Query: 415 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
DRA LA V G D+ NF PE G ILAN T +GM P D P+ + L Y LVF
Sbjct: 423 DRANSLAHAVSGEVKLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVF 482
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
D+VYTP+ TRLL+EAE +GA IVSG+EMF+ QA Q+ FTG G + A
Sbjct: 483 DSVYTPRKTRLLKEAEAAGAIIVSGVEMFLRQAIGQFNLFTGGEGAVRA 531
>gi|58041010|gb|AAW63134.1| dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 510
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/498 (76%), Positives = 432/498 (86%), Gaps = 2/498 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
+LIC P+M +S+DKMV++ KA+ GADLVEIRLD LK+FNP E++KT+IK+SP+PTLFT
Sbjct: 1 SLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF SI GKKP K KVIVSS
Sbjct: 61 YRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSS 120
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNYQ TPSVEDL LVARIQ +GADIVK ATTA+DI DVAR+F IT +QVP IGLVMGE
Sbjct: 121 HNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGE 180
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
RGL+SRILC+KFGG+LTFGTL++ VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIGKPV
Sbjct: 181 RGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPV 240
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
HSKSPI++N+AFKSV FNGV+VHLLVD++ F Q YSS+DFAGFSCTIPHKEAA++CCD
Sbjct: 241 SHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCD 300
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSALAG 381
EVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR G + SS LA
Sbjct: 301 EVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLAS 360
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
K VVIGAGGAGKALAYGAK KGA+VVIANRTY+RA ELAE +GG ALSL DL+N++PED
Sbjct: 361 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPED 420
Query: 442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
GM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA VSG E
Sbjct: 421 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSE 480
Query: 502 MFIGQAYEQYERFTGLPG 519
MF+ QAYEQ+E FTGLP
Sbjct: 481 MFVRQAYEQFEIFTGLPA 498
>gi|255542472|ref|XP_002512299.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548260|gb|EEF49751.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 524
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/511 (67%), Positives = 419/511 (81%), Gaps = 2/511 (0%)
Query: 10 SGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENI 69
S +L + ++ +PTL+C P+MG +VD+M+++M KA AD+VEIRLD L+N NPR+++
Sbjct: 2 SDLQLSNSSVQSSPTLLCTPLMGTTVDQMLLEMRKATEISADVVEIRLDCLRNLNPRQDL 61
Query: 70 KTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI 129
+ LIK+SP+PTL TYRPIWEGGQY+GDE +R D LR AM+LGA+Y+DVEL+VA EFN+SI
Sbjct: 62 EILIKQSPLPTLVTYRPIWEGGQYEGDETKRQDALRFAMQLGANYVDVELEVAHEFNNSI 121
Query: 130 RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT 189
GKKP+ KVIVSSHN+ TPS E ++NLVARIQA+GADIVK ATTALDITD AR+FQI
Sbjct: 122 YGKKPDNFKVIVSSHNFHNTPSSEAIANLVARIQATGADIVKIATTALDITDCARIFQIM 181
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
VH QVP+IG+VMGERGLISR+L KFGG+LT+G LE G +SAPGQPT KDLLDLYNFR +
Sbjct: 182 VHCQVPVIGIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLI 241
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFA-GF 308
PDTKV+GIIGKPVGHSKSP+L+N AFKSVG N V+VH LVDD+ KFF TYSS DFA G
Sbjct: 242 RPDTKVYGIIGKPVGHSKSPLLFNAAFKSVGLNAVYVHFLVDDVEKFFSTYSSVDFASGC 301
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
SCTIPHKE A+KC DE+D +AK IGA+N IIRR D L YNTDY+GAI AIEDGLR
Sbjct: 302 SCTIPHKEVALKCMDEIDPIAKKIGAINNIIRR-PDATLMAYNTDYIGAIDAIEDGLREL 360
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
+S LAGKLFVV+GAGGAGK+LAYGA KGARVV+ANRT++RA+ELA+ V G A
Sbjct: 361 NGAVPAGTSPLAGKLFVVLGAGGAGKSLAYGAAQKGARVVVANRTFERAKELADKVNGQA 420
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
++L +++NF+PE+GM+LANTTS+GM+P +D TP+ KHAL HY +VFDA+YTPK TRLLRE
Sbjct: 421 MTLDEVQNFHPEEGMVLANTTSVGMKPNIDATPLAKHALKHYCVVFDAIYTPKDTRLLRE 480
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
A+ESGA IV G EM I Q +EQY+ FTGLP
Sbjct: 481 AKESGAVIVYGTEMLIRQGFEQYKNFTGLPA 511
>gi|147837950|emb|CAN60561.1| hypothetical protein VITISV_034024 [Vitis vinifera]
Length = 531
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/512 (69%), Positives = 428/512 (83%), Gaps = 1/512 (0%)
Query: 8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE 67
+A+ + G R+N TLICVPIM +SVD+M+ + KA G DLVEIRLD LKNF+PR+
Sbjct: 8 LATSDIQIPEGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQ 67
Query: 68 NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFND 127
+++ L+K+SP+PTL TYRP WEGGQYDGDE +R+D LRLA+ELGADYIDVELQVA EF +
Sbjct: 68 DLQFLVKQSPLPTLVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFIN 127
Query: 128 SIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 187
SI+GK K K+IVSSHNYQ TPS E+L NLVARIQA+GADIVK ATTALDITD AR+FQ
Sbjct: 128 SIQGKTSGKVKIIVSSHNYQNTPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQ 187
Query: 188 ITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247
+ HSQVP IG+ M ERGLISRIL AKFG +LTFG+LE G+VSAPGQPT+KDLLDLYNFR
Sbjct: 188 VLAHSQVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFR 247
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
Q+GPDTKV G+IGKP+GHSKSP LYN AFKSVGFNG+++ LLVD + F TYSS DF G
Sbjct: 248 QIGPDTKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVG 307
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+S TIPHKE ++CCDE+D +A++IGA++C+IRR +DGKL GYN DY+GAI+AIE+GLR
Sbjct: 308 YSYTIPHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA 367
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
N + V S LAGKLFVVIGAGGAGKALAYG K KGARVV+ANRT+++A+ELA VGG
Sbjct: 368 S-NGTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGE 426
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A++LA+LENF+PEDGMILANTTS+GM+P +D TP+ K AL Y+LVFDA+YTPK+TRLLR
Sbjct: 427 AMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLR 486
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
EA+ESGA IV G EMFI QA+ Q+ERFTGLP
Sbjct: 487 EAQESGAIIVYGTEMFINQAFVQFERFTGLPA 518
>gi|298204991|emb|CBI34298.3| unnamed protein product [Vitis vinifera]
Length = 600
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/512 (69%), Positives = 427/512 (83%), Gaps = 1/512 (0%)
Query: 8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE 67
+A+ + G R+N TLICVPIM +SVD+M+ + KA G DLVEIRLD LKNF+PR+
Sbjct: 77 LATSDIQIPEGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQ 136
Query: 68 NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFND 127
+++ L+K+SP+PTL TYRP WEGGQYDGDE +R+D LRLA+ELGADYIDVELQVA EF +
Sbjct: 137 DLQFLVKQSPLPTLVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFIN 196
Query: 128 SIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 187
SI+GK K+IVSSHNYQ +PS E+L NLVARIQA+GADIVK ATTALDITD AR+FQ
Sbjct: 197 SIQGKTSGNVKIIVSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQ 256
Query: 188 ITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247
+ HSQVP IG+ M ERGLISRIL AKFG +LTFG+LE G+VSAPGQPT+KDLLDLYNFR
Sbjct: 257 VLAHSQVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFR 316
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
Q+GPDTKV G+IGKP+GHSKSP LYN AFKSVGFNG+++ LLVD + F TYSS DF G
Sbjct: 317 QIGPDTKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVG 376
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+S TIPHKE ++CCDE+D +A++IGA++C+IRR +DGKL GYN DY+GAI+AIE+GLR
Sbjct: 377 YSYTIPHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA 436
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
N + V S LAGKLFVVIGAGGAGKALAYG K KGARVV+ANRT+++A+ELA VGG
Sbjct: 437 S-NGTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGE 495
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A++LA+LENF+PEDGMILANTTS+GM+P +D TP+ K AL Y+LVFDA+YTPK+TRLLR
Sbjct: 496 AMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLR 555
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
EA+ESGA IV G EMFI QA+ Q+ERFTGLP
Sbjct: 556 EAQESGAIIVYGTEMFINQAFVQFERFTGLPA 587
>gi|225451148|ref|XP_002270232.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 531
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/512 (69%), Positives = 427/512 (83%), Gaps = 1/512 (0%)
Query: 8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE 67
+A+ + G R+N TLICVPIM +SVD+M+ + KA G DLVEIRLD LKNF+PR+
Sbjct: 8 LATSDIQIPEGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQ 67
Query: 68 NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFND 127
+++ L+K+SP+PTL TYRP WEGGQYDGDE +R+D LRLA+ELGADYIDVELQVA EF +
Sbjct: 68 DLQFLVKQSPLPTLVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFIN 127
Query: 128 SIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 187
SI+GK K+IVSSHNYQ +PS E+L NLVARIQA+GADIVK ATTALDITD AR+FQ
Sbjct: 128 SIQGKTSGNVKIIVSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQ 187
Query: 188 ITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247
+ HSQVP IG+ M ERGLISRIL AKFG +LTFG+LE G+VSAPGQPT+KDLLDLYNFR
Sbjct: 188 VLAHSQVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFR 247
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
Q+GPDTKV G+IGKP+GHSKSP LYN AFKSVGFNG+++ LLVD + F TYSS DF G
Sbjct: 248 QIGPDTKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVG 307
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+S TIPHKE ++CCDE+D +A++IGA++C+IRR +DGKL GYN DY+GAI+AIE+GLR
Sbjct: 308 YSYTIPHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA 367
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
N + V S LAGKLFVVIGAGGAGKALAYG K KGARVV+ANRT+++A+ELA VGG
Sbjct: 368 S-NGTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGE 426
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A++LA+LENF+PEDGMILANTTS+GM+P +D TP+ K AL Y+LVFDA+YTPK+TRLLR
Sbjct: 427 AMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLR 486
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
EA+ESGA IV G EMFI QA+ Q+ERFTGLP
Sbjct: 487 EAQESGAIIVYGTEMFINQAFVQFERFTGLPA 518
>gi|224125422|ref|XP_002319582.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857958|gb|EEE95505.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 521
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/504 (67%), Positives = 423/504 (83%), Gaps = 1/504 (0%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
+ G R+N TLIC PIM ESVD+M+V M +A GAD+ E+R+D LKNF+PR +++ LIK+
Sbjct: 6 ADGERRNSTLICAPIMAESVDQMLVQMKRAKELGADVAEVRVDFLKNFSPRNDLEALIKQ 65
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
P+PTL TYRP WEGGQYDGDEN+R L++AMELGAD+ID+EL+VA+EF + I+GKKPE
Sbjct: 66 CPLPTLITYRPKWEGGQYDGDENKRQKALQIAMELGADFIDIELKVAQEFYNFIQGKKPE 125
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
K K+IVSSHNY+ TPS+E++ +LVARIQA+GADIVK ATTALDITD AR+F I V+ QVP
Sbjct: 126 KVKIIVSSHNYECTPSIEEIGDLVARIQATGADIVKVATTALDITDNARMFHIIVNLQVP 185
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
+IGLVMGERGL+SR+L AK+G FLTFG++E G+VSAPGQPT+KDLL+LYN RQ+ DTKV
Sbjct: 186 MIGLVMGERGLMSRVLAAKYGAFLTFGSIEAGVVSAPGQPTVKDLLELYNLRQIEADTKV 245
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
G+IG P+GHSKSP LYN AFKSVGFNG+++ LLVD +A + TYSS DFAG+S TIPHK
Sbjct: 246 HGVIGNPIGHSKSPHLYNAAFKSVGFNGIYLPLLVDSVANYISTYSSPDFAGYSYTIPHK 305
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E +KCCDEVD +AK IGA++C+IRR DGKL GYN DY+GAI+AIE+ L G N +
Sbjct: 306 EDGLKCCDEVDPIAKEIGAISCMIRRPDDGKLKGYNVDYLGAIAAIEEAL-GASNGAPAS 364
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
S LAGKLFVV+GAGGAGKALAYGA KGARVV+ANRTY +A+ELA VGG A++LA L+
Sbjct: 365 VSPLAGKLFVVMGAGGAGKALAYGAYEKGARVVVANRTYGKAKELASKVGGQAIALAKLK 424
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
+F+PE+GMILANTTS+GM+P++++TP+ K AL HYALVFDA+YTPK+T LLREA+E+G+T
Sbjct: 425 DFHPEEGMILANTTSVGMKPRIEDTPLAKEALKHYALVFDAIYTPKLTTLLREAQEAGST 484
Query: 496 IVSGLEMFIGQAYEQYERFTGLPG 519
IV G EMFI QA+ Q+ERFTGLP
Sbjct: 485 IVYGTEMFINQAFVQFERFTGLPA 508
>gi|356577650|ref|XP_003556937.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 479
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/464 (73%), Positives = 383/464 (82%), Gaps = 15/464 (3%)
Query: 66 RENIKTLIKESPVPTLFTYR--------PIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
RE + + P P L YR P EGG YDG EN+R+D LRLAMELGADY+DV
Sbjct: 5 REEGQGQPQTEPRP-LLVYRRRNKTQQGPKLEGGMYDGGENKRLDALRLAMELGADYVDV 63
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
+LQVA EF DSIRGK K KVIVSSHNYQ TPS+EDL NLVARIQA+GADIVK ATTAL
Sbjct: 64 QLQVAYEFYDSIRGKTFNKTKVIVSSHNYQLTPSMEDLGNLVARIQATGADIVKIATTAL 123
Query: 178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
DITDVAR+FQI VHSQVP IGLV G+RGLIS ILCAKFGG++TFGTLE+ +VSA GQPT+
Sbjct: 124 DITDVARMFQIMVHSQVPFIGLVCGDRGLISHILCAKFGGYVTFGTLESRVVSASGQPTL 183
Query: 238 KDLLDLYNFRQMG----PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDI 293
KDLL LYN RQ+ PDTKVFGIIGKPV HSKSPIL+NE FKS+G NGV+V LLVDD+
Sbjct: 184 KDLLYLYNLRQLSNKLTPDTKVFGIIGKPVSHSKSPILFNEVFKSIGLNGVYVFLLVDDL 243
Query: 294 AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD 353
A F + YSS +F GF TIPHKEAA+KCCDEVD VAKSIGAVNCI+RR +DGKL GYNTD
Sbjct: 244 ANFLRAYSSTEFVGFGVTIPHKEAAIKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTD 303
Query: 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT 413
YVGA++AIEDGLRG+ N S S LA KLFVVIGA AGKALAYGAKAKGARVVIANRT
Sbjct: 304 YVGAVTAIEDGLRGKHNGSSTTISPLASKLFVVIGADVAGKALAYGAKAKGARVVIANRT 363
Query: 414 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV 473
+DRARELA+ +GG AL+L+DL+N++PEDGMIL NTTSIGMQPKVDE P+ KHAL +Y+LV
Sbjct: 364 FDRARELADAIGGDALALSDLDNYHPEDGMILTNTTSIGMQPKVDEKPVSKHALKYYSLV 423
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
FDAV TPKITRLL+EAEESGATIV+GLEMF+G+ QYE FTGL
Sbjct: 424 FDAVNTPKITRLLKEAEESGATIVTGLEMFMGRX--QYENFTGL 465
>gi|356574916|ref|XP_003555589.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 630
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/509 (64%), Positives = 413/509 (81%), Gaps = 6/509 (1%)
Query: 15 VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK 74
+ G+R+N TLIC ESV++MV +M K GADLVE RLD L +F+P +++ +LI
Sbjct: 111 IGSGVRRNSTLICASTSAESVEEMVFEMVKGKELGADLVEARLDFLNDFHPTQHLPSLIN 170
Query: 75 ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
P+P L TYRPIWEGG+YDGDE++R D LRLA+ELG++++DVEL+VA EF SI GKK
Sbjct: 171 NRPLPILITYRPIWEGGEYDGDESQRQDALRLAIELGSEFVDVELKVADEFYKSIGGKKA 230
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV 194
E K+IVSSHN + TPSVE++ NL ARIQA+GAD+VK ATTALDITD AR+FQ+ VHSQV
Sbjct: 231 ESVKIIVSSHNLESTPSVEEIGNLAARIQATGADVVKIATTALDITDCARLFQVLVHSQV 290
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTK 254
P+IG+ MGE+G ISR+LCAKFGGFLTFG++E G +SAPGQ TIK+LLDLYNFRQ+G TK
Sbjct: 291 PMIGIAMGEKGFISRVLCAKFGGFLTFGSIEAGAISAPGQTTIKELLDLYNFRQIGVGTK 350
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
V G+IG P+GHSKSP LYN AFKSVGF+G+++ LL+D+++ F TYSS DF G+S TIPH
Sbjct: 351 VHGVIGNPIGHSKSPHLYNPAFKSVGFDGIYLPLLIDNVSDFLNTYSSPDFVGYSYTIPH 410
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K+ ++CCDEVD +AK+IGA++C+I+R +DG+L GYN DY+GAI+AIE+ R L S G
Sbjct: 411 KQNGLRCCDEVDPIAKAIGAISCMIKRPNDGRLIGYNFDYLGAIAAIEE--RLHLQDSNG 468
Query: 375 VS----SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
S S L GKLFVV+GAGGAGKALAYG K KGARVV+ANRTY +A+ELA VGG A++
Sbjct: 469 RSISGCSPLYGKLFVVMGAGGAGKALAYGGKEKGARVVVANRTYAKAKELATKVGGEAIT 528
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L++LE+F+PE GMILANTTS+GM+PK+D TPIPK AL HY+LVFDA+YTPK+TRLLREA+
Sbjct: 529 LSELESFHPEQGMILANTTSVGMKPKIDLTPIPKEALKHYSLVFDAIYTPKLTRLLREAQ 588
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPG 519
E+GA IV G EMFI QA+ Q+E FT LP
Sbjct: 589 ETGAAIVYGTEMFINQAFMQFEMFTKLPA 617
>gi|259479224|dbj|BAI40147.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Diospyros
kaki]
Length = 508
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/495 (65%), Positives = 404/495 (81%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC P+M E+ ++M+ M KA GADLVEIR+D LK+F+P+++++ LIK+SP+PT+ TY
Sbjct: 1 MICAPVMAETAEQMLGQMRKAKELGADLVEIRIDYLKSFSPQQHLEVLIKQSPLPTIITY 60
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP WEGGQYDGDE+ R L AMELGADYID+EL+VA EF SI+ + P++ KVIVSSH
Sbjct: 61 RPTWEGGQYDGDESRRQATLHQAMELGADYIDIELKVADEFFSSIQERSPKRPKVIVSSH 120
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
NY+ TPS E++ N+ ARIQA+GADIVK ATTALDITD AR+ Q+ HSQVP IGL MGER
Sbjct: 121 NYENTPSAEEIGNIAARIQATGADIVKIATTALDITDSARILQLIAHSQVPTIGLAMGER 180
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GLISRILCAKFGGFLTFG LE+GI SAPGQPT++DLLDLYNFRQ+ PDTKV G+IG P+G
Sbjct: 181 GLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIEPDTKVHGVIGNPIG 240
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
HSKSP LYN AFK FNG+++ LLVD++A F TYSS DF G+S TIPHK A ++CCDE
Sbjct: 241 HSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPHKMAGLECCDE 300
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
VD +AK+IGA++C+I++ SDGKL GYN DY+GAI+AIE+GL G + S G S LAG+LF
Sbjct: 301 VDPIAKAIGAISCMIKKPSDGKLIGYNVDYLGAIAAIEEGLGGSSSASNGSVSPLAGRLF 360
Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
VVIGAGGA KALAYG K KGARVV+ANRTY++A++LA +GG ++ L +L +F+PEDGMI
Sbjct: 361 VVIGAGGAAKALAYGGKEKGARVVVANRTYEKAKDLARKIGGESMPLTELNDFHPEDGMI 420
Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI 504
LAN TS+GM+P D TPI K AL Y+LVFDA+YTPK TRLLREA+E+GA +V G EMF+
Sbjct: 421 LANATSVGMKPNTDATPISKEALSRYSLVFDAIYTPKWTRLLREAKETGAKVVFGTEMFL 480
Query: 505 GQAYEQYERFTGLPG 519
QA+ Q+E+FTGLP
Sbjct: 481 NQAFVQFEKFTGLPA 495
>gi|195641452|gb|ACG40194.1| shikimate dehydrogenase [Zea mays]
Length = 540
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/497 (67%), Positives = 403/497 (81%), Gaps = 3/497 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLF 82
T++CVP + +M ++ A A GAD+ E+RLD L F PR ++ ++ K P+P L
Sbjct: 22 TMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFTPRRDLPVILAKPRPLPALV 81
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD++ R + L LAMELGA+Y+DVEL+VA +F I G+KP+ CK+IVS
Sbjct: 82 TYRPKWEGGEYEGDDDSRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVS 141
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
SHNY+ TPS E+L+NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGL+M
Sbjct: 142 SHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQVPIIGLLMN 201
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
+RG ISR+LC K+GGFLTFG+L+ G SAP QPT DL++LYN RQ+GPDTKVFGIIGKP
Sbjct: 202 DRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKP 261
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
VGHSKSPIL+NEAF+SVGFN V+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV+CC
Sbjct: 262 VGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCC 321
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-RLNVSGGVSSALAG 381
DEVD +A+ IGAVN I+RR DGKL GYNTDYVGAISAIEDG++ + S LAG
Sbjct: 322 DEVDPIARDIGAVNTIVRR-PDGKLVGYNTDYVGAISAIEDGIKASESEPTDPDKSPLAG 380
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+ELA +GG AL+LADLEN++PE+
Sbjct: 381 RLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYHPEE 440
Query: 442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSGLE
Sbjct: 441 GMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLE 500
Query: 502 MFIGQAYEQYERFTGLP 518
MFI QA Q+E FTG+P
Sbjct: 501 MFIRQAMGQFEHFTGMP 517
>gi|212274689|ref|NP_001130790.1| shikimate dehydrogenase1 [Zea mays]
gi|194690122|gb|ACF79145.1| unknown [Zea mays]
gi|413916608|gb|AFW56540.1| shikimate dehydrogenase [Zea mays]
Length = 543
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/500 (67%), Positives = 402/500 (80%), Gaps = 6/500 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLF 82
T++CVP + +M ++ A A GAD+ E+RLD L F PR ++ ++ K P+P L
Sbjct: 22 TMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALV 81
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD+ R + L LAMELGA+Y+DVEL+VA +F I G+KP+ CK+IVS
Sbjct: 82 TYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVS 141
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHNY+ TPS E+L+NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGL
Sbjct: 142 SHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 201
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC K+GGFLTFG+L+ G SAP QPT DL++LYN RQ+GPDTKVFGII
Sbjct: 202 VMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGII 261
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPVGHSKSPIL+NEAF+SVGFN V+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV
Sbjct: 262 GKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAV 321
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-RLNVSGGVSSA 378
+CCDEVD VA+ IGAVN I+RR DGKL GYNTDYVGAISAIEDG++ + S
Sbjct: 322 RCCDEVDPVARDIGAVNTIVRR-PDGKLVGYNTDYVGAISAIEDGIKASESEPTDPDKSP 380
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
LAG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+ELA +GG AL+LADLEN++
Sbjct: 381 LAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYH 440
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PE+GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VS
Sbjct: 441 PEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVS 500
Query: 499 GLEMFIGQAYEQYERFTGLP 518
GLEMFI QA Q+E FTG+P
Sbjct: 501 GLEMFIRQAMGQFEHFTGMP 520
>gi|413916609|gb|AFW56541.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
gi|413916610|gb|AFW56542.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
Length = 534
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/501 (67%), Positives = 402/501 (80%), Gaps = 6/501 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLF 82
T++CVP + +M ++ A A GAD+ E+RLD L F PR ++ ++ K P+P L
Sbjct: 22 TMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALV 81
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD+ R + L LAMELGA+Y+DVEL+VA +F I G+KP+ CK+IVS
Sbjct: 82 TYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVS 141
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHNY+ TPS E+L+NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGL
Sbjct: 142 SHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 201
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC K+GGFLTFG+L+ G SAP QPT DL++LYN RQ+GPDTKVFGII
Sbjct: 202 VMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGII 261
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPVGHSKSPIL+NEAF+SVGFN V+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV
Sbjct: 262 GKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAV 321
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-RLNVSGGVSSA 378
+CCDEVD VA+ IGAVN I+RR DGKL GYNTDYVGAISAIEDG++ + S
Sbjct: 322 RCCDEVDPVARDIGAVNTIVRR-PDGKLVGYNTDYVGAISAIEDGIKASESEPTDPDKSP 380
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
LAG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+ELA +GG AL+LADLEN++
Sbjct: 381 LAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYH 440
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PE+GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VS
Sbjct: 441 PEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVS 500
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
GLEMFI QA Q+E FTG+P
Sbjct: 501 GLEMFIRQAMGQFEHFTGMPA 521
>gi|242085728|ref|XP_002443289.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
gi|241943982|gb|EES17127.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
Length = 541
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/498 (66%), Positives = 398/498 (79%), Gaps = 6/498 (1%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLFT 83
++CVP + +M ++ A A GAD+ E+RLD L F PR ++ ++ K P+P L T
Sbjct: 23 MVCVPATARAPREMAEELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGG+Y+GD+ R + L LAMELGA+Y+DVE +VA +F I GKKP+ CK+IVSS
Sbjct: 83 YRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVEFKVADKFMKLISGKKPDNCKLIVSS 142
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGLV 200
HNY+ TPS E+L+NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGLV
Sbjct: 143 HNYENTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLV 202
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
M +RG ISR+LC K+GGFLTFG+L+ G SAP QPT DL+++YN RQ+GPDTKVFGIIG
Sbjct: 203 MNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINVYNIRQIGPDTKVFGIIG 262
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
KPVGHSKSPIL+NEAF+SVG N V+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV+
Sbjct: 263 KPVGHSKSPILHNEAFRSVGSNAVYVPFLVDDLAKFLNTYSSPDFAGFSCTIPHKEAAVR 322
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
CCDEVD +A+ IGAVN I+RR DGKL GYNTDYVGAISAIEDG+R +S LA
Sbjct: 323 CCDEVDPIARDIGAVNTIVRR-PDGKLVGYNTDYVGAISAIEDGIRASEQTDSD-TSPLA 380
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
G+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+EL +GG AL+LADLEN++PE
Sbjct: 381 GRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLADLENYHPE 440
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
+GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSGL
Sbjct: 441 EGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSGL 500
Query: 501 EMFIGQAYEQYERFTGLP 518
EMFI QA Q+E FTG+P
Sbjct: 501 EMFIRQAMGQFEHFTGMP 518
>gi|357151512|ref|XP_003575813.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 549
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 330/499 (66%), Positives = 401/499 (80%), Gaps = 6/499 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLF 82
TL+CVP + +M ++ A A GAD+ E+RLD L F PR ++ L+ K +P L
Sbjct: 22 TLLCVPATARAPREMAAEVAAAAALGADVAELRLDRLSGFAPRRDLPALLAKPRALPALV 81
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+YDGD+ R + L+LAMELGA+Y+D+EL+VA +F + GKKPEKCK+IVS
Sbjct: 82 TYRPKWEGGEYDGDDEPRFEALQLAMELGAEYVDIELKVADKFMKFMSGKKPEKCKLIVS 141
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHNY TPS E+L +L+A+IQA+GADIVK ATTA +I DV+R+FQI VH QVPIIGL
Sbjct: 142 SHNYDNTPSAEELGSLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC KFGG+LTFG+L G SAP QPT DL+++YN RQ+GPDT+VFGII
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLAKGKESAPAQPTAADLINVYNIRQIGPDTRVFGII 261
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPVGHSKSPIL+NEAF+SVG + V+V LVDD+A+F TYSS DFAGFSCTIPHKEAAV
Sbjct: 262 GKPVGHSKSPILHNEAFRSVGMDAVYVPFLVDDLARFLTTYSSPDFAGFSCTIPHKEAAV 321
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
+CCDEVD +A+ IGAVN I+RR SDGKL GYNTDYVGAISAIEDG+R + + +S L
Sbjct: 322 RCCDEVDPIARDIGAVNTIVRR-SDGKLVGYNTDYVGAISAIEDGIRASQS-THSTASPL 379
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+ELA +GG AL+L++LEN++P
Sbjct: 380 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLSELENYHP 439
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
E+GM+LANTT+IGM P V++TP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSG
Sbjct: 440 EEGMVLANTTAIGMHPNVNDTPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 499
Query: 500 LEMFIGQAYEQYERFTGLP 518
LEMFI QA Q+E FTG P
Sbjct: 500 LEMFIRQAMGQFEHFTGTP 518
>gi|218186992|gb|EEC69419.1| hypothetical protein OsI_38581 [Oryza sativa Indica Group]
Length = 531
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/500 (65%), Positives = 399/500 (79%), Gaps = 6/500 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLF 82
TL+CVP + +M ++ A A GAD+ E+RLD L F PR ++ L+ + P+P L
Sbjct: 20 TLLCVPATARAPREMAAELAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD+ R + L LAME+GA+Y+D+EL+VA +F I GKKPE CK+IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHN++ TPS E+L NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGL
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC KFGG+LTFG+LE G SAP QPT+ DL+++YN +Q+GPDTKV+GII
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPVGHSKSPIL+NEAF+SVG N V+V LVDD+A F TYSS +FAGFSCTIPHKEAAV
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
+CCDEVD +AK IGAVN IIR+ +GKL GYNTDYVGAISAIEDG+R + +S L
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRK-PNGKLVGYNTDYVGAISAIEDGIRAS-QPTDTTTSPL 377
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+EL +G AL+LA+LEN++P
Sbjct: 378 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHP 437
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
E+GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSG
Sbjct: 438 EEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 497
Query: 500 LEMFIGQAYEQYERFTGLPG 519
LEMFI QA Q+E FTG+P
Sbjct: 498 LEMFIRQAMGQFEHFTGMPA 517
>gi|148906893|gb|ABR16592.1| unknown [Picea sitchensis]
gi|148907829|gb|ABR17039.1| unknown [Picea sitchensis]
Length = 518
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 324/517 (62%), Positives = 401/517 (77%), Gaps = 5/517 (0%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
+N L+C+P++G+S+++M+ M A GAD VE+R+D ++NFNPR ++ TL+K +P
Sbjct: 6 QNDCLLCIPLVGQSMEEMLSQMELARIHGADCVELRIDHVRNFNPRVDLDTLLKARTMPA 65
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
+ TYRP WEGG Y+GDE +R+DVLRLAMELGADYIDVELQVA +F SI KK E K+I
Sbjct: 66 IVTYRPKWEGGAYEGDEGKRLDVLRLAMELGADYIDVELQVASDFIKSISNKKRENSKII 125
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
VS+HNYQ+TPS+EDL LVARIQ++GADIVK ATTA DITDVAR+F++ + QVPI+ LV
Sbjct: 126 VSNHNYQFTPSLEDLGLLVARIQSTGADIVKIATTATDITDVARIFRVLAYCQVPILALV 185
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
M ERGLISR+LC KFGG+LTFG+LE G SAPGQ T+ D+L++Y R +G DTKVFG+IG
Sbjct: 186 MSERGLISRLLCPKFGGYLTFGSLEAGKESAPGQATLADMLNIYKIRGLGRDTKVFGLIG 245
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
PV HSK P L+N AF +GF+ ++V LVDDI +F + YSS DFAGFS TIPHKEAA++
Sbjct: 246 NPVSHSKGPTLHNRAFGEIGFDAIYVPFLVDDIKEFLKVYSSPDFAGFSVTIPHKEAALE 305
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV-SSAL 379
CCDEVD +A+SIGAVN I+RRQSDGKL GYNTD VGAISAIED L+G+ N SS L
Sbjct: 306 CCDEVDPIARSIGAVNTIVRRQSDGKLIGYNTDSVGAISAIEDALKGKHNYGDWTHSSPL 365
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AGKLF+++GAGGAGKALA+GAK KGARVVIANR Y+RA+ LA V G A+ L L++F P
Sbjct: 366 AGKLFLIVGAGGAGKALAFGAKQKGARVVIANRNYERAKALAIQVEGEAIPLDKLDHFRP 425
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
E GMILANTTS+GM P V +TPI K AL YA+VFDAVYTPK TRLL++AE +GA +V G
Sbjct: 426 ETGMILANTTSMGMHPNVSQTPISKEALSSYAVVFDAVYTPKWTRLLQDAEATGALVVCG 485
Query: 500 LEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYS 536
LEMFI QA Q+E FTG AP ++L Y+
Sbjct: 486 LEMFIRQAMGQFELFTGC----KAPEKLMREIVLKYT 518
>gi|222617206|gb|EEE53338.1| hypothetical protein OsJ_36349 [Oryza sativa Japonica Group]
Length = 531
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 328/500 (65%), Positives = 397/500 (79%), Gaps = 6/500 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLF 82
TL+CVP + +M + A A GAD+ E+RLD L F PR ++ L+ + P+P L
Sbjct: 20 TLLCVPATARAPREMAAEFAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD+ R + L LAME+GA+Y+D+EL+VA +F I GKKPE CK+IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHN++ TPS E+L NLVA+IQA+GADIVK ATTA +I DVA++FQI VH QVPIIGL
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC KFGG+LTFG+LE G SAP QPT+ DL+++YN +Q+GPDTKV+GII
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPVGHSKSPIL+NEAF+SVG N V+V LVDD+A F TYSS +FAGFSCTIPHKEAAV
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
+CCDEVD +AK IGAVN IIR+ +GKL GYNTDYVGAISAIEDG+R + +S L
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRK-PNGKLVGYNTDYVGAISAIEDGIRAS-QPTDTTTSPL 377
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+EL +G AL+LA+LEN++P
Sbjct: 378 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHP 437
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
E+ MILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSG
Sbjct: 438 EEEMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 497
Query: 500 LEMFIGQAYEQYERFTGLPG 519
LEMFI QA Q+E FTG+P
Sbjct: 498 LEMFIRQAMGQFEHFTGMPA 517
>gi|326502876|dbj|BAJ99066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 333/500 (66%), Positives = 398/500 (79%), Gaps = 6/500 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-KESPVPTLF 82
TLICVP + M ++ A A GADL E+RLD L F PR ++ L+ K +PTL
Sbjct: 22 TLICVPATARAPRDMAAEVAAAAALGADLAELRLDRLAGFAPRRDLPALLAKPRTLPTLV 81
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGG+Y+GD+ R + L+LAMELGA+Y+D+EL+VA +F + GKKPE CK+IVS
Sbjct: 82 TYRPKWEGGEYEGDDEPRFEALQLAMELGAEYVDIELKVADKFIKFMSGKKPENCKLIVS 141
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH---SQVPIIGL 199
SHNY TPS E+L++L+A+IQA+GADIVK ATTA +I DV+R+FQI VH QVPIIGL
Sbjct: 142 SHNYDNTPSAEELASLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM +RG ISR+LC KFGG+LTFG+LE G SA QPT DL+++YN RQ+GPDTKVFGII
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAAAQPTAADLINVYNIRQIGPDTKVFGII 261
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
G PVGHSKSPIL+NEAF+SVG + V+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV
Sbjct: 262 GNPVGHSKSPILHNEAFRSVGLHAVYVPFLVDDLAKFLSTYSSPDFAGFSCTIPHKEAAV 321
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
+CCDEVD +A+ IGAVN IIR+ DGKL GYNTDYVGAISAIEDG+R + +S L
Sbjct: 322 RCCDEVDPIARDIGAVNTIIRK-PDGKLVGYNTDYVGAISAIEDGIRA-TQPTHSTTSPL 379
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+ RA+EL +GG AL+LA+LEN++P
Sbjct: 380 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLAELENYHP 439
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
E+GMILANTT+IGM P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSG
Sbjct: 440 EEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 499
Query: 500 LEMFIGQAYEQYERFTGLPG 519
LEMFI QA Q+E FTG+P
Sbjct: 500 LEMFIRQAMGQFEHFTGMPA 519
>gi|226499578|ref|NP_001152357.1| LOC100285997 [Zea mays]
gi|195655441|gb|ACG47188.1| shikimate biosynthesis protein aroDE [Zea mays]
gi|414877457|tpg|DAA54588.1| TPA: shikimate biosynthesis protein aroDE [Zea mays]
Length = 509
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/493 (63%), Positives = 388/493 (78%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++G +V++M+ D A A+G D+VEIRLD ++ F PRE++ L++ P+P L T
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP+WEGGQY+GD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+YTPS E+++NLVA IQA GADIVK ATTA DI DV+R+FQ+ VH QVP+IGLVM E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GL+SR+L KFGG+LTFG L SA GQPT++DLLD+YN + +GPDTK+ G+I PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL D++A F +TYSS DF+GFSC++P K AV+CCD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G V S LAG+L
Sbjct: 302 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGP-GSKDAVISPLAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVVIANRTY++A LA +GG AL L DLE F PE+GM
Sbjct: 360 IVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVRLANAIGGQALRLEDLETFRPEEGM 419
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK ALG Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 420 ILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEMF 479
Query: 504 IGQAYEQYERFTG 516
I QA Q+E FTG
Sbjct: 480 IRQAMGQFEHFTG 492
>gi|242053027|ref|XP_002455659.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
gi|241927634|gb|EES00779.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
Length = 509
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 317/493 (64%), Positives = 389/493 (78%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++G +V++M+ D A A+G D+VEIRLD ++ F PRE++ L + P+P L T
Sbjct: 2 TLLCVPLVGRTVEEMIADAAAAAATGGDMVEIRLDFIQGFRPREHLPPLFRSCPLPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP+WEGGQY+GD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFISGHKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+YTPS E+++NLVARIQA GADIVK ATTA DI DV+R+FQ+ VH QVP+IGLVM E
Sbjct: 122 HNYEYTPSCEEITNLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
RGL+SR+L KFGG+LTFG L SA GQPT++DLL++YN + +GPDTKV G+I PV
Sbjct: 182 RGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLNIYNIKCIGPDTKVLGLIANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL D++A F +TYSS DF+GFSC++P K AV+CCD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G SS LAG+L
Sbjct: 302 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGP-GSKDAASSPLAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVVIANRTY++A LA +GG AL L DLE F PE+GM
Sbjct: 360 VVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVSLANAIGGQALRLEDLETFRPEEGM 419
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK ALG Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 420 ILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEMF 479
Query: 504 IGQAYEQYERFTG 516
I QA Q+ERFTG
Sbjct: 480 IRQAMGQFERFTG 492
>gi|115436640|ref|NP_001043078.1| Os01g0375200 [Oryza sativa Japonica Group]
gi|113532609|dbj|BAF04992.1| Os01g0375200, partial [Oryza sativa Japonica Group]
Length = 572
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 318/493 (64%), Positives = 393/493 (79%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++ +V+ M D A A+GADLVEIRLD ++ F PRE++ +L++ P+P L T
Sbjct: 65 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 124
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGGQYDGD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 125 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 184
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+ TPS E+L++LVARIQA G+DIVK ATTA DI DV+R+FQ+ VH QVP+IGLVMGE
Sbjct: 185 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 244
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GL+SR+L KFGG+LTFGTL+ +SAPGQPT+K+LLD+YN R++GPDTKV G+I PV
Sbjct: 245 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 304
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL DD+A+F TYSS DF+GFSC++P K AV+CC
Sbjct: 305 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 364
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G + +S LAG+L
Sbjct: 365 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGPGSKDAAISP-LAGRL 422
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVV+ANRTY++A LA VGGHAL LA+LE F PE+GM
Sbjct: 423 VVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEGM 482
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 483 ILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEMF 542
Query: 504 IGQAYEQYERFTG 516
+ QA Q+E FTG
Sbjct: 543 VRQAMGQFEHFTG 555
>gi|54290767|dbj|BAD61388.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
gi|125570444|gb|EAZ11959.1| hypothetical protein OsJ_01832 [Oryza sativa Japonica Group]
Length = 509
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 318/493 (64%), Positives = 393/493 (79%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++ +V+ M D A A+GADLVEIRLD ++ F PRE++ +L++ P+P L T
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGGQYDGD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+ TPS E+L++LVARIQA G+DIVK ATTA DI DV+R+FQ+ VH QVP+IGLVMGE
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GL+SR+L KFGG+LTFGTL+ +SAPGQPT+K+LLD+YN R++GPDTKV G+I PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL DD+A+F TYSS DF+GFSC++P K AV+CC
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G + +S LAG+L
Sbjct: 302 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGPGSKDAAISP-LAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVV+ANRTY++A LA VGGHAL LA+LE F PE+GM
Sbjct: 360 VVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEGM 419
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 420 ILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEMF 479
Query: 504 IGQAYEQYERFTG 516
+ QA Q+E FTG
Sbjct: 480 VRQAMGQFEHFTG 492
>gi|357132175|ref|XP_003567707.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 509
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/493 (63%), Positives = 386/493 (78%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++ +V++M D A A+G DLVEIRLD ++ F PRE++ L+ P+P L T
Sbjct: 2 TLLCVPLVARTVEEMETDAAAAAAAGGDLVEIRLDFIEGFRPREHLPRLLHGCPLPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGG+YDGD+ R + LRLAMELGA Y+D+EL+VA +F + + G KPEKCK+IVSS
Sbjct: 62 YRPNWEGGRYDGDDATRFETLRLAMELGAVYVDIELKVADKFINFLSGYKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+ TPS E+L+NLVARIQA GADIVK ATTA DI DV+R+FQ+ VH QVP+IGLVM E
Sbjct: 122 HNYESTPSCEELANLVARIQAVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
RGL+SR+L KFGG+LTFG L+ SA GQPT+++LLD+YN R +GPDTKV G++ PV
Sbjct: 182 RGLMSRVLSPKFGGYLTFGILDTTKTSASGQPTVEELLDIYNIRSIGPDTKVLGLVANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +SVG++ V++ LL DD+A+F TYSS DF+GFSC++P K AV CC
Sbjct: 242 KQSKSPILHNKCLQSVGYDAVYLPLLADDLARFLDTYSSPDFSGFSCSLPFKVDAVHCCH 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E DTVAKSIGA+N IIR+ DGKL GYNTDY+GAISAIEDG+ G + VS LAG+L
Sbjct: 302 EHDTVAKSIGAINTIIRK-PDGKLVGYNTDYIGAISAIEDGIGGPGSKDAAVSP-LAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVV+ANRTY++A LA VGG AL LADLENF PE GM
Sbjct: 360 IVVVGAGGAGKAIAYGAKKKGARVVVANRTYEKAVGLANAVGGQALRLADLENFRPEGGM 419
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 420 ILANATSLGMYPNVDGTPIPKKALSSYDVVFDAVYAPKVTRLLREAEEQGIKVVSGVEMF 479
Query: 504 IGQAYEQYERFTG 516
+ QA Q+E FTG
Sbjct: 480 VRQAMGQFEHFTG 492
>gi|218188248|gb|EEC70675.1| hypothetical protein OsI_01994 [Oryza sativa Indica Group]
Length = 509
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/493 (64%), Positives = 392/493 (79%), Gaps = 2/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++ +V+ M D A A+GADLVEIRLD ++ F PRE++ +L++ P+P L T
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPIPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP WEGGQYDGD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+ TPS E+L++LVARIQA G+DIVK ATTA DI DV+R+FQ+ VH QVP+IGLVM E
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMSE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GL+SR+L KFGG+LTFGTL+ +SAPGQPT+K+LLD+YN R++GPDTKV G+I PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL DD+A+F TYSS DF+GFSC++P K AV+CC
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G + +S LAG+L
Sbjct: 302 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGPGSKDAAISP-LAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VV+GAGGAGKA+AYGAK KGARVV+ANRTY++A LA VGGHAL LA+LE F PE+GM
Sbjct: 360 VVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEGM 419
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EMF
Sbjct: 420 ILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEMF 479
Query: 504 IGQAYEQYERFTG 516
+ QA Q+E FTG
Sbjct: 480 VRQAMGQFEHFTG 492
>gi|397911050|gb|AFO68801.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 377
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 311/386 (80%), Positives = 342/386 (88%), Gaps = 10/386 (2%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
ICVP+ ESVD+M++ M KA SG DLVE+RLD LK+FNP ++++ LIKE P+PT+FT+R
Sbjct: 2 ICVPLTAESVDEMLIGMRKAKESGVDLVEVRLDFLKSFNPPQDLEFLIKECPLPTIFTFR 61
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
P WEGGQYDG+EN+R+D LRLAMELGADYIDVELQVAREFN+SI KKPEK KVIVSSHN
Sbjct: 62 PKWEGGQYDGEENKRLDALRLAMELGADYIDVELQVAREFNNSISAKKPEKFKVIVSSHN 121
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERG 205
Y+ TPSVEDL NLVA+IQA+GADIVK ATTALDITDVAR+FQITVHSQVPIIGLVMGERG
Sbjct: 122 YENTPSVEDLGNLVAKIQATGADIVKIATTALDITDVARIFQITVHSQVPIIGLVMGERG 181
Query: 206 LISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGH 265
LISR+LC KFGG+LTF TLE G VSAPGQPTI DLL++YNFR +GPDTKVFGIIGKPVGH
Sbjct: 182 LISRLLCPKFGGYLTFATLEAGKVSAPGQPTINDLLNVYNFRLIGPDTKVFGIIGKPVGH 241
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV 325
SKSP+LYN AFKS+GFNGV+VHLLVDDIAKF QTYSS DF GFS TIPHKE AVKCC+EV
Sbjct: 242 SKSPLLYNSAFKSIGFNGVYVHLLVDDIAKFLQTYSSTDFVGFSVTIPHKENAVKCCNEV 301
Query: 326 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
D VAKSI AVNCII+RQSDGKLFGYNTDYVGAISAIEDGLR S LAGKLFV
Sbjct: 302 DPVAKSIEAVNCIIKRQSDGKLFGYNTDYVGAISAIEDGLR----------SPLAGKLFV 351
Query: 386 VIGAGGAGKALAYGAKAKGARVVIAN 411
VIGAGGAGKALAYGAKAKGARVVIAN
Sbjct: 352 VIGAGGAGKALAYGAKAKGARVVIAN 377
>gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
Length = 657
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 307/493 (62%), Positives = 389/493 (78%), Gaps = 3/493 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGL-KNFNPRENIKTLIKESPVPTLF 82
TL+CVP++ +V+ M D A A+GADLVEIRLD + F PRE++ L++ P+P +
Sbjct: 85 TLLCVPLVARTVEAMRADAAAAAAAGADLVEIRLDFIGSKFRPREDLPRLLRGCPLPAIV 144
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
TYRP WEGGQY+GD+ R + LRLAMELG +Y+D+EL+VA +F I G KPEKCK+IVS
Sbjct: 145 TYRPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVS 204
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
+HNY+ TPS E+L++LVARIQA GADIVK ATTA DI DV+++FQ+ VH QVP+IGLVMG
Sbjct: 205 AHNYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMG 264
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
E+GL+SR+L KFGG+LTFG+L+ VSAPGQPT+++L+D+Y+ R++GPDTKV G+I P
Sbjct: 265 EKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIANP 324
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
V SKSP+L+N +SVG+N V++ LL D+IA+F TYSS DF+GFSC++P K AV+CC
Sbjct: 325 VKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCC 384
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
E D VAKSIGA++ IIRR DGKL GYN DY+GAI AIEDG+ G + + V+ LAG+
Sbjct: 385 HEHDPVAKSIGAISTIIRR-PDGKLLGYNNDYIGAICAIEDGIGGPGSKNAAVTP-LAGR 442
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
L VV+GAGGAGKA+AYGAK KGAR+V+ANRTY++A LA VGGHAL LA+LE F PE+G
Sbjct: 443 LLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 502
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
MILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EM
Sbjct: 503 MILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 562
Query: 503 FIGQAYEQYERFT 515
F+ QA Q+ERFT
Sbjct: 563 FLRQALGQFERFT 575
>gi|194694678|gb|ACF81423.1| unknown [Zea mays]
Length = 428
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/416 (72%), Positives = 348/416 (83%), Gaps = 5/416 (1%)
Query: 108 MELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGA 167
MELGA+Y+DVEL+VA +F I G+KP+ CK+IVSSHNY+ TPS E+L+NLVA+IQA+GA
Sbjct: 1 MELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSHNYETTPSSEELANLVAQIQATGA 60
Query: 168 DIVKFATTALDITDVARVFQITVH---SQVPIIGLVMGERGLISRILCAKFGGFLTFGTL 224
DIVK ATTA +I DVA++FQI VH QVPIIGLVM +RG ISR+LC K+GGFLTFG+L
Sbjct: 61 DIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKYGGFLTFGSL 120
Query: 225 ENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGV 284
+ G SAP QPT DL++LYN RQ+GPDTKVFGIIGKPVGHSKSPIL+NEAF+SVGFN V
Sbjct: 121 KKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGFNAV 180
Query: 285 FVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD 344
+V LVDD+AKF TYSS DFAGFSCTIPHKEAAV+CCDEVD VA+ IGAVN I+RR D
Sbjct: 181 YVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDEVDPVARDIGAVNTIVRR-PD 239
Query: 345 GKLFGYNTDYVGAISAIEDGLRG-RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAK 403
GKL GYNTDYVGAISAIEDG++ + S LAG+LFVVIGAGGAGKALAYGAK K
Sbjct: 240 GKLVGYNTDYVGAISAIEDGIKASESEPTDPDKSPLAGRLFVVIGAGGAGKALAYGAKEK 299
Query: 404 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP 463
GARVVIANRT+ RA+ELA +GG AL+LADLEN++PE+GMILANTT+IGM P V+ETP+
Sbjct: 300 GARVVIANRTFARAQELANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNETPLS 359
Query: 464 KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
K AL YA+VFDAVYTPK TRLLREA E GAT+VSGLEMFI QA Q+E FTG+P
Sbjct: 360 KQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPA 415
>gi|116787099|gb|ABK24375.1| unknown [Picea sitchensis]
Length = 514
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/501 (58%), Positives = 376/501 (75%), Gaps = 2/501 (0%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
M +N L+C P+M E+V++M+ M A GAD +EIRLD L + +++ L+K +
Sbjct: 1 MAQNGFLVCSPLMAETVEEMLSQMQHAKDVGADCIEIRLDCLNGY-ATTDLEQLLKARVL 59
Query: 79 PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
PT+ TYR EGG+Y+ DE +R+D LRLA ELGAD+IDVELQVA +F I+ KK CK
Sbjct: 60 PTIVTYRLKSEGGKYEVDEKKRLDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNCK 119
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
+IVS+H TPS EDLS+LV +Q++GADI+K TTA +ITDV+RVFQ+ H QVPII
Sbjct: 120 IIVSNHISGRTPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPIIA 179
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
V G+RGLIS++L KFGG+L +G++ +G S PGQP + DL Y ++ DTKVFG+
Sbjct: 180 CVTGDRGLISQLLGPKFGGYLIYGSIGSGKDSTPGQPKLADLTGHYKIGRLNSDTKVFGV 239
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
I PVGHSK PIL+N+AF+ GFNGV+V LLVD++A F + YS+ DFAGFS IPHKEAA
Sbjct: 240 IANPVGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKEAA 299
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL-NVSGGVSS 377
V CCDEV +A+SIGAVN I+RRQSDGKL GYNTD GAISAIEDGL+G +++ G SS
Sbjct: 300 VTCCDEVQPLAQSIGAVNTIVRRQSDGKLIGYNTDCEGAISAIEDGLKGETGSINSGSSS 359
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
LAG+ FV++GAGGAG+ALA+GAK +GA V+IANR Y+RA+ LA +VGG A+++ L +F
Sbjct: 360 PLAGRTFVLVGAGGAGRALAFGAKQRGAHVIIANRNYERAKSLANSVGGEAIAVEQLNSF 419
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
PE G +LANT+++GMQP V+ TP+ K ALG Y LVFDAVYTP+ TRLLREA+E+G +V
Sbjct: 420 RPETGAVLANTSAVGMQPNVNATPLSKEALGAYTLVFDAVYTPRETRLLREAKEAGKIVV 479
Query: 498 SGLEMFIGQAYEQYERFTGLP 518
SGLEMFI QA QYE FTG P
Sbjct: 480 SGLEMFIRQAIGQYELFTGKP 500
>gi|302817344|ref|XP_002990348.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
gi|300141910|gb|EFJ08617.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
Length = 536
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 296/504 (58%), Positives = 377/504 (74%), Gaps = 9/504 (1%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
+N T++C P++ ESV++M+ + A ASGAD+VE+R+D + +F PR ++ LI+ +P
Sbjct: 23 QNGTMLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPRVDLPRLIEGRVLPV 82
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREF-NDSIRGKKPEKCKV 139
+ TYRP WEGG Y+GDE RV L LA+EL AD+IDVELQVA +F + ++
Sbjct: 83 IITYRPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRI 142
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ----VP 195
IVS+HNY TPS E++ LVAR+QA+GADI+KF TTA ++ D A VF++ H+Q VP
Sbjct: 143 IVSNHNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQLSLKVP 202
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
I LVMG++GLISR+L KFGGFLTFGTL +G SAPGQPT+ DL+ Y R+M DT+V
Sbjct: 203 TIALVMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRV 262
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+GIIG PVGHSK P L+N AF+++G+N V++ LVD++A+F YS+ DF GFS TIP K
Sbjct: 263 YGIIGNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFK 322
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A+KCCDEV++ AK+IGAVN IIRR +DGK GYNTD AISAIEDG+R G
Sbjct: 323 EDALKCCDEVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVR-ESGYHG-- 378
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
S L+GKL VVIGAGGAGKALA+GAK +GARVVIANR ++RA+ LAE+VG A+SL L
Sbjct: 379 SQPLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLS 438
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
+F PE+GMILAN+TS+GMQP V +TPIPK AL Y++VFDAVYTP TRLLREA+ESGA
Sbjct: 439 SFQPENGMILANSTSVGMQPNVQDTPIPKAALKGYSVVFDAVYTPLETRLLREAKESGAV 498
Query: 496 IVSGLEMFIGQAYEQYERFTGLPG 519
+VSGLEMFI QA Q+E FTG P
Sbjct: 499 VVSGLEMFIRQAIGQFELFTGQPA 522
>gi|125525997|gb|EAY74111.1| hypothetical protein OsI_01996 [Oryza sativa Indica Group]
Length = 455
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/431 (64%), Positives = 346/431 (80%), Gaps = 2/431 (0%)
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP WEGGQY+GD+ R + LRLAMELG +Y+D+EL+VA +F I G KPEKCK+IVS+H
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
NY+ TPS E+L++LVARIQA GADIVK ATTA DI DV+++FQ+ VH QVP+IGLVMGE+
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEK 123
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GL+SR+L KFGG+LTFG+L+ VSAPGQPT+++LLD+YN R++GPDTKV G+I PV
Sbjct: 124 GLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELLDIYNIRRIGPDTKVLGVIANPVK 183
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
SKSP+L+N +SVG+N V++ LL D+IA+F TYSS DF+GFSC++P K AV+CC +
Sbjct: 184 QSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHK 243
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
D VAKSIGA++ IIRR DGKL GYN DY+GAISAIEDG+ G + + V+ LAG+L
Sbjct: 244 HDPVAKSIGAISTIIRR-PDGKLVGYNNDYIGAISAIEDGIGGPGSKNAAVTP-LAGRLL 301
Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
VV+GAGGAGKA+AYGAK KGAR+V+ANRTY++A LA VGGHAL LA+LE F PE+GMI
Sbjct: 302 VVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEGMI 361
Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI 504
LAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+EMF+
Sbjct: 362 LANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEMFL 421
Query: 505 GQAYEQYERFT 515
QA ERFT
Sbjct: 422 RQALGPLERFT 432
>gi|226494502|ref|NP_001140289.1| uncharacterized protein LOC100272333 [Zea mays]
gi|194698862|gb|ACF83515.1| unknown [Zea mays]
gi|414878214|tpg|DAA55345.1| TPA: hypothetical protein ZEAMMB73_777854 [Zea mays]
Length = 532
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/471 (59%), Positives = 357/471 (75%), Gaps = 9/471 (1%)
Query: 59 GLKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
GL P ++ L+ + +P + TYRP WEGGQY G++ R + L LAMELGA+Y+DV
Sbjct: 55 GLLWSTPCRDLPVLLAQPRSLPVIVTYRPNWEGGQYAGEDEPRFEALLLAMELGAEYVDV 114
Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
E +VA +F + GKKP+ CK+I+S+++Y+ TPSV +L NLVA+I+A+GADIVK TTA
Sbjct: 115 EFKVADKFMKYLSGKKPQNCKLIISAYDYKTTPSVHELLNLVAQIRATGADIVKIETTAA 174
Query: 178 DITDVARVFQITVH---SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 234
DI D +R+FQ+ H QVPIIGLV E G ISRI+CAK+GG+LTF +LENG S Q
Sbjct: 175 DIVDTSRMFQVLAHCHEKQVPIIGLVRKEHGFISRIICAKYGGYLTFASLENGKESTTEQ 234
Query: 235 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 294
PT+ DL++ Y RQ+GPDTKVFGIIG PV HSKSPI+ N+AF+SVGF+ VF+ L DD+
Sbjct: 235 PTVADLINKYKIRQIGPDTKVFGIIGNPVSHSKSPIVQNQAFRSVGFDAVFLPFLSDDLV 294
Query: 295 KFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDY 354
+F T+S+ D+AGFSCT+PHKE A++CCD+VD +A+ IGA+N IIRR DGKL GYNTDY
Sbjct: 295 QFLYTFSAPDYAGFSCTMPHKETALRCCDDVDPIARDIGAINTIIRR-PDGKLVGYNTDY 353
Query: 355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414
GAISAIEDG+R + ++S LAG+LFVVIGAGGAGKALAYGAK KGARVVIANRT+
Sbjct: 354 SGAISAIEDGIRAS-QPTDSITSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTF 412
Query: 415 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
RA+ELA +GG AL+L++LE+++PE GMILAN TS+GM P VDETP+ KHAL YA+VF
Sbjct: 413 ARAQELAHIIGGTALTLSELESYHPEKGMILANATSVGMHPNVDETPLSKHALKSYAVVF 472
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
DAV+ P+ TRLLREA GAT++ GLEM I Q++ FT G M AP
Sbjct: 473 DAVFVPRETRLLREAAVCGATVIDGLEMLIRLVMVQFKLFT---GGMTAPE 520
>gi|302795227|ref|XP_002979377.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
gi|300153145|gb|EFJ19785.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
Length = 498
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 287/496 (57%), Positives = 365/496 (73%), Gaps = 13/496 (2%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
++C P++ ESV++M+ + A ASGAD+VE+R+D + +F P ++ LI+ +P + TY
Sbjct: 1 MLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPGVDLPRLIEGRVLPVIITY 60
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREF-NDSIRGKKPEKCKVIVSS 143
RP WEGG Y+GDE RV L LA+EL AD+IDVELQVA +F + ++IVS+
Sbjct: 61 RPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRIIVSN 120
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY TPS E++ LVAR+QA+GADI+KF TTA ++ D A VF++ H+QVP I LVMG+
Sbjct: 121 HNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQVPTIALVMGQ 180
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GLISR+L KFGGFLTFGTL +G SAPGQPT+ DL+ Y R+M DT+V+GIIG PV
Sbjct: 181 KGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGIIGNPV 240
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
GHSK P L+N AF+++G+N V++ LVD++A+F YS+ DF GFS TIP KE A+KCCD
Sbjct: 241 GHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDALKCCD 300
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
EV++ AK+IGAVN IIRR +DGK GYNTD AISAIEDG+R G S L+GKL
Sbjct: 301 EVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVR-ESGYHG--SQPLSGKL 356
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VVIGAGGAGKALA+GAK +GARVVIANR ++RA+ LAE+VG A+SL L +F PE GM
Sbjct: 357 CVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLSSFQPETGM 416
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN+TS+GMQP AL Y++VFDAVYTP TRLLREA+ESGA +VSGLEMF
Sbjct: 417 ILANSTSVGMQPNA--------ALKGYSVVFDAVYTPLETRLLREAKESGAVVVSGLEMF 468
Query: 504 IGQAYEQYERFTGLPG 519
I QA Q+E FTG P
Sbjct: 469 IRQAIGQFELFTGQPA 484
>gi|7488788|pir||S48698 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate
5-dehydrogenase (EC 1.1.1.25) precursor - garden pea
(fragment)
Length = 325
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/321 (77%), Positives = 285/321 (88%), Gaps = 1/321 (0%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVP 79
KN TLICVPIMGE+V+KMVVD+ KA +GADLVEIRLD L FNP +++ T I++ +P
Sbjct: 2 KNATLICVPIMGETVEKMVVDIQKAKLNGADLVEIRLDSLSTFNPHQDLNTFIQQHHSLP 61
Query: 80 TLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
LFTYRPIWEGG+YDGDEN R+D LRLA+ELGADY+D+EL+VA EF DSIRGK K KV
Sbjct: 62 FLFTYRPIWEGGKYDGDENRRLDALRLAVELGADYVDIELKVAHEFYDSIRGKMFNKTKV 121
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGL 199
IVSSHNYQYTPSVEDL +LVARIQA+GADIVK ATTA++ITDVAR+FQI VHSQVP IGL
Sbjct: 122 IVSSHNYQYTPSVEDLGDLVARIQATGADIVKIATTAVEITDVARMFQILVHSQVPFIGL 181
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VMG+RGL+SR+LCAKFGG+LTFGTLE+G+VSAPGQPTIKDLL LYNFRQ+GP+TKV+GII
Sbjct: 182 VMGDRGLVSRVLCAKFGGYLTFGTLESGVVSAPGQPTIKDLLHLYNFRQLGPETKVYGII 241
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKPV HSKSPIL+NEAFK+VGFNGVFV LLVDD+A F +TYSS DF GFS TIPHKE+A+
Sbjct: 242 GKPVSHSKSPILFNEAFKTVGFNGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKESAL 301
Query: 320 KCCDEVDTVAKSIGAVNCIIR 340
KCCDEVD VAKSIGAVN I+R
Sbjct: 302 KCCDEVDPVAKSIGAVNXIVR 322
>gi|255542474|ref|XP_002512300.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
gi|223548261|gb|EEF49752.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
Length = 368
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/353 (67%), Positives = 302/353 (85%)
Query: 15 VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK 74
++ G R+N TLIC P+M +SVD M+V + KA GADLVEIR+D L+NF+P ++++ LIK
Sbjct: 15 IADGGRRNSTLICAPVMAKSVDGMLVQINKAKELGADLVEIRVDFLENFSPIQDLEILIK 74
Query: 75 ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
+S +PTL TYRP WE G+YDGDE++R + LRLA+ELG+D+IDVEL+VA EF +SI+GKKP
Sbjct: 75 QSALPTLITYRPKWEVGEYDGDESKRQEALRLAIELGSDFIDVELKVAPEFFNSIQGKKP 134
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV 194
EK K+IVSSHNY+ TPSVE+++NLVA+IQ++GADIVK ATTALDITD AR+FQ+ VH+QV
Sbjct: 135 EKVKIIVSSHNYENTPSVEEIANLVAKIQSTGADIVKVATTALDITDNARMFQVLVHAQV 194
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTK 254
P+IG+VM ERGL+SRIL AKFGGFLTFG++E G+VSAPGQPTI DLLDLYN RQ+G DTK
Sbjct: 195 PMIGIVMAERGLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDLLDLYNLRQIGADTK 254
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
V G+IG P+GHSKSP LYN AFKSV FNG+++ LLVD++A + TYSS+DF G+S TIPH
Sbjct: 255 VHGVIGNPIGHSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTYSSSDFVGYSYTIPH 314
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
KEA +KCCDEVD +A++IGA++C+IRR SDGKL GYN DY+GAI AIE+ LRG
Sbjct: 315 KEAGLKCCDEVDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGAIEEALRG 367
>gi|397911052|gb|AFO68802.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 355
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/366 (67%), Positives = 301/366 (82%), Gaps = 11/366 (3%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
L+C P+MG +VD+M+++M KA GADLVEIRLD L+ FNP + + LIK+ P+PTL TY
Sbjct: 1 LLCTPLMGTTVDQMLLEMRKAKDIGADLVEIRLDCLRTFNPGQVLNILIKQCPLPTLVTY 60
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP+WEGGQY+GDEN+R D LRLAMELGA Y+D+EL+VA +FN+SI KKP+ K+IVSSH
Sbjct: 61 RPVWEGGQYEGDENKRQDALRLAMELGAAYVDIELEVANDFNNSIAAKKPDGFKIIVSSH 120
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
N+ TPS+E + NLVARIQA+GADIVK ATTALDITD AR+FQITV+SQ+P+IG+VMGER
Sbjct: 121 NFHNTPSLEGIGNLVARIQATGADIVKIATTALDITDCARIFQITVNSQIPMIGIVMGER 180
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GLISRIL KFGG+LTFG LE G +SAPGQPT KDL++LYNFR + PDTKV+GIIGKPVG
Sbjct: 181 GLISRILSPKFGGYLTFGALEAGAISAPGQPTAKDLVELYNFRLINPDTKVYGIIGKPVG 240
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
HSKSP+L+NE++KS+G N V+VHLLVDD+ KFF TYS+ DF GFSCTIPHKEAA+KC E
Sbjct: 241 HSKSPLLFNESWKSIGLNSVYVHLLVDDVEKFFATYSALDFFGFSCTIPHKEAALKCMAE 300
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
+D +AK IGA+N I++R DGK YNTDY+GAI+ IED LR S LAGKLF
Sbjct: 301 IDPIAKKIGAINNIVKR-PDGKFKAYNTDYIGAIAGIEDELR----------SPLAGKLF 349
Query: 385 VVIGAG 390
VV+GAG
Sbjct: 350 VVLGAG 355
>gi|224125426|ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857959|gb|EEE95506.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/501 (52%), Positives = 354/501 (70%), Gaps = 3/501 (0%)
Query: 17 GGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES 76
G+ N T++C P+M SV++MV+DM A A GAD VE+RLD + +F P ++++T+I+
Sbjct: 4 AGILANSTMVCAPLMARSVEQMVIDMQSAEAQGADAVEVRLDYINSFQPSQDLETIIRNK 63
Query: 77 PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK 136
P+P + YRP WEGGQY+GDE+ R++ LRLA ELGADYIDVEL+VA + ++ K
Sbjct: 64 PLPVIIVYRPRWEGGQYEGDEHTRLEALRLAHELGADYIDVELKVASDLVREVKNKHQTG 123
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPI 196
KVIVSS+ TPS EDLS+LVA +QA+ ADI+K + A DIT++ R+F + H QVP
Sbjct: 124 GKVIVSSYLSGATPSKEDLSHLVASMQATKADIIKVVSNANDITELDRIFHLLSHMQVPA 183
Query: 197 IGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVF 256
+ +GERGLIS++LC KFGG L +G +E S PG PT+ L + Y + DTKVF
Sbjct: 184 VAYSLGERGLISQLLCPKFGGALVYGAMEGN--SIPGLPTLDSLREAYKVENINSDTKVF 241
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKE 316
G++ KPV HSK PIL+N AF+ FNG++V + VDD+ +FF+ Y+S DFAG+S P+KE
Sbjct: 242 GLVSKPVSHSKGPILHNPAFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYKE 301
Query: 317 AAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG-V 375
A V+ CDEV +AKSIGAVN IIR+ SDGKL GYNTD G+I++IED L+ + ++G +
Sbjct: 302 AVVQFCDEVHPLAKSIGAVNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYINGASL 361
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
+S LAGK FVV+GAGGAG+A+A GAK++GARV+I + DRA+ LA+ V G A L
Sbjct: 362 NSPLAGKQFVVVGAGGAGRAIAVGAKSRGARVIIFDIDLDRAKSLAQVVSGEAQHFDSLA 421
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
+F PE G ILAN T IGM P D P+ + LG+Y LVFDAVYTP+ TRLL +A+ +GA
Sbjct: 422 HFQPEKGAILANATPIGMHPSTDRIPVAEATLGNYQLVFDAVYTPRKTRLLEDADAAGAI 481
Query: 496 IVSGLEMFIGQAYEQYERFTG 516
VSG+EMF+ QA Q+ FTG
Sbjct: 482 TVSGVEMFLKQAIGQFSLFTG 502
>gi|168017409|ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687580|gb|EDQ73962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 519
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/500 (54%), Positives = 354/500 (70%), Gaps = 3/500 (0%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
LICVP+ ++V KM+ + A SGAD+ E+R+D + F+ ++ L+K+ P+P + T
Sbjct: 8 LICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKPLPVIVTP 67
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGK-KPEKCKVIVSS 143
R WEGG+Y G E R D+LR+A +LGADYIDVEL+VA F +R + K K+IVS+
Sbjct: 68 RAKWEGGEYKGSEESRQDILRMAYDLGADYIDVELKVAGGFIQELRSRGKDSTTKIIVSN 127
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HN+ +TPS E++ + ++ A+G DIVK+ TTA DITDVA+VF S+ P IGL MG
Sbjct: 128 HNWDFTPSDEEIHATIEQMWATGGDIVKYVTTAQDITDVAQVFHFLSESKGPTIGLAMGP 187
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G+ISR+L KFGG+LTFG L G SAPGQPT++DL+++Y + M DT V+G+IGKPV
Sbjct: 188 AGMISRLLAPKFGGYLTFGALCKGQESAPGQPTVQDLIEVYRVKSMDRDTMVYGVIGKPV 247
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
HSK P+L+N+ F+ + N V+V LLVDD KF ++ DF GFS TIP+KE A+K CD
Sbjct: 248 YHSKGPVLHNKGFEELNLNKVYVPLLVDDFNKFMNVFNRPDFHGFSVTIPYKEDALKLCD 307
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
V+ AK IGAVN ++ R++ G+ GYNTD GA+SAIE GLR ++ + L GKL
Sbjct: 308 RVENAAKIIGAVNTVV-RETTGEYQGYNTDCEGALSAIEKGLR-HSGLANNDETPLKGKL 365
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
FVVIGAGGAGKALAYGAK + ARVV+ANR Y+RA+ LAE+VGG A+ L L +F PE GM
Sbjct: 366 FVVIGAGGAGKALAYGAKERHARVVVANRNYERAKALAESVGGKAIELDQLSDFRPETGM 425
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
ILAN+TSIGM+P+V +PI K AL YALVFDAVYTPK T+LL++A E GA VSG EMF
Sbjct: 426 ILANSTSIGMEPEVTRSPIHKDALSAYALVFDAVYTPKQTQLLKDAAEMGAVTVSGEEMF 485
Query: 504 IGQAYEQYERFTGLPGKMNA 523
GQA+ Q+ FT LP +A
Sbjct: 486 YGQAFAQFRYFTDLPAPESA 505
>gi|224130894|ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222838117|gb|EEE76482.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/502 (52%), Positives = 354/502 (70%), Gaps = 3/502 (0%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
S G+ N ++C P+M +SV++MV+DM A A GAD+VE+RLD + F PR++++T+I+
Sbjct: 3 SVGVLTNSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETIIRN 62
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
P+P + YRP WEGGQY+GDE+ R++ LRLA +LGADYID+EL+VA E ++ K
Sbjct: 63 KPLPVIIVYRPKWEGGQYEGDEHRRLEALRLANDLGADYIDLELKVASELIWELKNKHQN 122
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
KVIVSS+ TPS E+LS+LVA +QA+ ADI+K + A DIT++ R+F + H +VP
Sbjct: 123 GGKVIVSSYLNGATPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCEVP 182
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
+ +GERGLIS++LC KFGG L +G++E S PG PT+ L + Y + DTKV
Sbjct: 183 AVAYSVGERGLISQLLCPKFGGALVYGSMEGN--SIPGLPTLDSLREAYKVDCINSDTKV 240
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
FG++ KPVGHSK P+L+N + V FNG++V + VDD+ KFF Y+S DFAG+S P+K
Sbjct: 241 FGLVSKPVGHSKGPLLHNPTLRHVNFNGIYVPMFVDDLKKFFDVYASPDFAGYSVGFPYK 300
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG-G 374
EA V+ CDEV +AK IGAVN IIRR DGKL GYNTD G+I+AIED LR + V+G
Sbjct: 301 EAVVQFCDEVHPLAKCIGAVNTIIRRPCDGKLIGYNTDCEGSITAIEDALRDQKYVNGRS 360
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
++S LAGK FVV+GAGGAG+A+A GAK++GAR++I + +RA+ LA V G A L
Sbjct: 361 LNSPLAGKQFVVVGAGGAGRAIAVGAKSRGARLIIFDIDLERAKSLARAVSGEAQHFESL 420
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
+F PE+G ILAN T IGM P D P + LG+Y LVFDAVYTP+ TRLL++A+ +GA
Sbjct: 421 AHFQPENGAILANATPIGMHPSTDRIPAAEETLGNYQLVFDAVYTPRKTRLLKDADAAGA 480
Query: 495 TIVSGLEMFIGQAYEQYERFTG 516
VSG+EMF+ QA Q+ FTG
Sbjct: 481 ITVSGVEMFLRQAIGQFNLFTG 502
>gi|225451144|ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204989|emb|CBI34296.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/501 (50%), Positives = 351/501 (70%), Gaps = 4/501 (0%)
Query: 18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP 77
G+ K T+IC P+MG+SV++MV DM KA GADLVE+RLD + NF+P+++++ +++ P
Sbjct: 5 GVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIILRNKP 64
Query: 78 VPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+P + YRP WEGGQY+GDE+ R++ L LA +LGADYID EL+VA +F + +
Sbjct: 65 LPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSS 124
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
+ IVS + TP +EDL VA +Q++GAD++K A +IT++ ++F + H Q+P+I
Sbjct: 125 RTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLI 184
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
+G+RG +S+ILC KFGGFL +G++E V+ G PT++ L + Y + + DTKVFG
Sbjct: 185 AYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVA--GLPTLESLREAYKVQYINKDTKVFG 242
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
+I KPVGHSK PIL+N AF+ V +NG++V +LVDD+ +FF YSS DFAGFS IP+KEA
Sbjct: 243 LISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEA 302
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR--LNVSGGV 375
CDE+ +A+SIGAVN I+RR SDGKL GYNTD +I+AIED LR R N +
Sbjct: 303 VTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPL 362
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
+S L GK FV++GAGGAG+ALA+GA+++GA++VI + +DRA LA V G D+
Sbjct: 363 NSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFDRANSLAHAVSGEVKLYEDVA 422
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
NF PE G ILAN T +GM P D P+ + L Y LVFD+VYTP+ TRLL+EAE +GA
Sbjct: 423 NFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPRKTRLLKEAEAAGAI 482
Query: 496 IVSGLEMFIGQAYEQYERFTG 516
IVSG+EMF+ QA Q+ FTG
Sbjct: 483 IVSGVEMFLRQAIGQFNLFTG 503
>gi|449531177|ref|XP_004172564.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like, partial [Cucumis
sativus]
Length = 328
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/321 (73%), Positives = 271/321 (84%)
Query: 10 SGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENI 69
SG + + G+ +N TLICVPIM ES+DKM+VD+ KA +GAD+VEIRLD LK FNP E++
Sbjct: 8 SGLGIRTEGISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDL 67
Query: 70 KTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI 129
K LIKESP+PTLFTYRP WEGGQYDGDEN+R+DVLRLAM+LGADYIDVELQVAREF DSI
Sbjct: 68 KLLIKESPLPTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSI 127
Query: 130 RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT 189
+ +KP KVIVS+HNY+ TPS+EDL +LVA IQA+GADIVK ATTALDITDVAR+FQ+
Sbjct: 128 QQEKPNNFKVIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVL 187
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
V+SQVPIIGLVM +RG I R+LC K+GG+LTFGTLE GIVSAPGQPTIKDLL+LYNFR +
Sbjct: 188 VYSQVPIIGLVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHI 247
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
GPDTKVFGIIG PVG SK P LYNE FK VG + ++V LLVDD KF TYSS+D GFS
Sbjct: 248 GPDTKVFGIIGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFS 307
Query: 310 CTIPHKEAAVKCCDEVDTVAK 330
TIPHKEA K CDEVD+VAK
Sbjct: 308 VTIPHKEAVFKYCDEVDSVAK 328
>gi|414877458|tpg|DAA54589.1| TPA: hypothetical protein ZEAMMB73_882303 [Zea mays]
Length = 401
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+CVP++G +V++M+ D A A+G D+VEIRLD ++ F PRE++ L++ P+P L T
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
YRP+WEGGQY+GD+ R + LRLAMELG DY+D+EL+VA +F I G KPEKCK+IVSS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HNY+YTPS E+++NLVA IQA GADIVK ATTA DI DV+R+FQ+ VH QVP+IGLVM E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+GL+SR+L KFGG+LTFG L SA GQPT++DLLD+YN + +GPDTK+ G+I PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
SKSPIL+N+ +S+G+N V++ LL D++A F +TYSS DF+GFSC++P K AV+CCD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E D VAKSIGA+N IIRR DGKL GYNTDY+GAISAIEDG+ G V S LAG+L
Sbjct: 302 EHDPVAKSIGAINTIIRR-PDGKLVGYNTDYIGAISAIEDGIGGP-GSKDAVISPLAGRL 359
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDR 416
VV+GAGGAGKA+AYGAK KGARVVIANRTY +
Sbjct: 360 IVVVGAGGAGKAIAYGAKEKGARVVIANRTYGK 392
>gi|57920902|gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
[Nicotiana tabacum]
Length = 521
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/505 (51%), Positives = 351/505 (69%), Gaps = 8/505 (1%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
S G+ KN ++C P+M SV+++V M +A A GADLVEIRLDG+ NF P+++++ L+
Sbjct: 3 SVGLLKNSAMVCAPLMAPSVEQLVHGMLQAKAQGADLVEIRLDGINNFQPQKDLQVLLNN 62
Query: 76 SPVPTLFTYRPIWEGGQYDGDEN---ERVDVLRLAMELGADYIDVELQVAREFNDSIRGK 132
+P+P L YRPIWEG +++ D++ ++++VLR A ELGADYI+++L++A +F + +
Sbjct: 63 NPLPVLIVYRPIWEGNEFEEDDDHIHKQLEVLRWAKELGADYIELDLKIASDFTKKEKPR 122
Query: 133 KPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS 192
CKVI S T S EDLS +VA +Q++GADI+K T A DIT++ ++F + H
Sbjct: 123 WSSGCKVIASCFVDNVT-SKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHC 181
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
QVP+I +GERGLIS++L KFG L +G+L+ V PG PT+ L Y M D
Sbjct: 182 QVPLIAYSLGERGLISQLLGPKFGSVLVYGSLDCNAV--PGLPTLGSLRQAYGVDFMDTD 239
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
TKVFG+I KPVGHSK PIL+N F+ VG+NG++V + VDD+ +FF+ YSS DFAGFS I
Sbjct: 240 TKVFGLISKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGI 299
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLN 370
P+KEA V CDEVD +AKSIGAVN II+R DGKL GYNTD +I+AIED L+ G N
Sbjct: 300 PYKEAVVSFCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTN 359
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ + S LAGKLFV++GAGGAG+ALA+GAK++ A +VI + +DRA+ LA V G AL
Sbjct: 360 GAAFLPSPLAGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDFDRAKALAAAVSGEALP 419
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+L +F PE G ILAN T IGM P D P+ + +L Y +VFDAVYTP+ T LL++AE
Sbjct: 420 FENLASFQPEKGAILANATPIGMHPNKDRIPVSEASLKDYVVVFDAVYTPRKTTLLKDAE 479
Query: 491 ESGATIVSGLEMFIGQAYEQYERFT 515
+GA VSG+EMF+ QA Q+ FT
Sbjct: 480 AAGAITVSGVEMFLRQAIGQFHLFT 504
>gi|255542470|ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548259|gb|EEF49750.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 519
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/503 (50%), Positives = 344/503 (68%), Gaps = 4/503 (0%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
S G + ++C P+M +SV++M+ DM A GAD+VE+RLD + NF P ++++ +++
Sbjct: 3 SVGELTSSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAILRN 62
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
P+P + YRP EGG Y+GDE R++ LRLA LGADY+D EL+VA + ++G
Sbjct: 63 KPLPVIIVYRPKSEGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASDLIGELKGTHHT 122
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
KVIVS + P+ E+LS LVA +QA+GADI+K +TA +IT++ R+F + +H QVP
Sbjct: 123 GSKVIVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQVP 182
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
II +GERGLIS++L KFGG L +G++E S PG PT+ L + Y + DTKV
Sbjct: 183 IIAYSVGERGLISQLLSPKFGGSLLYGSMEGS--SIPGLPTLDSLREAYKVAYINSDTKV 240
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
FG++ KPV HSK P+L+N F+ +NG +V + VDD+ +FF YSS DFAGFS P+K
Sbjct: 241 FGLVSKPVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYK 300
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
EA V+ CDEV +AKSIGAVN IIRR DGKL G+NTD AI+AIED L+ + + G
Sbjct: 301 EAVVEFCDEVHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRT 360
Query: 376 S--SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
S S L G+ FV++GAGGAG+ALA+GAK++GAR+VI + +RA+ LA+ V G A +
Sbjct: 361 SSNSPLTGRQFVLVGAGGAGRALAFGAKSRGARIVIFDIDLERAKFLADAVSGEAQLFEN 420
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
+ NF PE+G ILAN T IGM P + P+ + LG Y LVFDAVYTP+ TRLL+EAE +G
Sbjct: 421 VVNFEPENGAILANATPIGMHPNTERIPVAEATLGIYQLVFDAVYTPRKTRLLKEAEAAG 480
Query: 494 ATIVSGLEMFIGQAYEQYERFTG 516
A IVSG+EMF+ QA Q+ FTG
Sbjct: 481 AIIVSGVEMFLRQAMGQFSLFTG 503
>gi|356504076|ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 524
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/509 (48%), Positives = 337/509 (66%), Gaps = 9/509 (1%)
Query: 16 SGGMRKNPTLICVPIMGE---SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTL 72
S + K+ ++C I S +++V M +A A GAD+VE+RLD + NF+ ++K +
Sbjct: 3 SNQVWKHSVMVCAAITTHQYVSAEQIVNGMHQAKAEGADIVELRLDCITNFHSHHDLKII 62
Query: 73 IKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGK 132
++ P+P L RP WEGG Y+GDEN+R++ L+LA+EL AD+IDVEL+ A +
Sbjct: 63 LQNKPLPVLIVNRPKWEGGLYEGDENKRLEALQLAVELSADFIDVELKAASCLPTLVEHM 122
Query: 133 KPEKC--KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV 190
+ K+IVS + TP E L LV +QA+GADI+K T A DIT++ R+F + +
Sbjct: 123 RNHNSHGKIIVSCYVDGTTPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSLFL 182
Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMG 250
+ QVP+I +GERGLIS++L KFGGF +G+L + PG P++ + + Y +
Sbjct: 183 YCQVPLIAYSVGERGLISQLLSPKFGGFFVYGSLAGNPI--PGLPSLDSIQEAYKLEHVN 240
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSC 310
DTKVFG+I KPV HS+ PIL+N +FK V +NG++V + VDD+ KFF TY S DF+GFS
Sbjct: 241 ADTKVFGLISKPVSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSV 300
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL--RGR 368
IP+KE ++ CDEV +A+SIGAVN IIRR DGKL GYNTD AI+AIED L G
Sbjct: 301 GIPYKEEVLRFCDEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGC 360
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
+ + S LAG+LFV++GAGGAGKALA+GAK++GAR+VI + +DRA+ LA V G A
Sbjct: 361 NDGEASLGSPLAGRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDFDRAKSLACAVFGEA 420
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+L NF PE G ILAN T +GM P D P+ + L Y LVFDAVYTP+ TRLL E
Sbjct: 421 QPFKELVNFQPEKGAILANATPVGMHPNTDRIPVAEATLEDYRLVFDAVYTPRRTRLLNE 480
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A+ +GA V+G+EMF+ QA Q+ FTGL
Sbjct: 481 ADAAGAITVAGVEMFLRQAIGQFNLFTGL 509
>gi|255559348|ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 515
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/499 (49%), Positives = 339/499 (67%), Gaps = 6/499 (1%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
+N L+C P+ E+ +M+ M KA GADLVE+R+D + +F+ ++ LIK +P
Sbjct: 4 QNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSM-SFSHISQVEKLIKLRTLPA 62
Query: 81 LFTYRPIWEGGQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
+ ++RP +GD + + VL LA++L +++++E +VA + + + K+
Sbjct: 63 IVSFRPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSGKL 122
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGL 199
IVSS+ PS E L NL+A +Q++GAD++K ITD+A VF++ H QVP+I L
Sbjct: 123 IVSSYVNGGKPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPLIAL 182
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
+G RGLIS++L KFGGFL +G+L + V PG PT+ L +Y + DTKVFG+I
Sbjct: 183 AVGSRGLISQLLGPKFGGFLVYGSLRDKAV--PGMPTLFSLRHVYKLEYINSDTKVFGLI 240
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
PVGHSK PIL+N AF+ G+NG++V + VDDI +FF+TY+S DFAGFS IPHKEAAV
Sbjct: 241 SNPVGHSKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAV 300
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV--SS 377
CCDEV +AKSIGAVN I+RR +DGKL GYNTD +I+AIED LR R + G +S
Sbjct: 301 SCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDTS 360
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
LAGK FV+IGAGGAG+ALA+GA ++GARVV+ NR ++RA+ LA V G AL L+ F
Sbjct: 361 PLAGKTFVLIGAGGAGRALAFGASSRGARVVVFNRNFERAKSLANAVSGEALPYKALDRF 420
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
E+ MILAN +++GM+P ++P+ K AL Y LVFDAVYTP+ TRLL+EA+E GA +V
Sbjct: 421 QRENDMILANASAVGMEPNTHQSPVSKEALKSYELVFDAVYTPRNTRLLQEAKEVGAVVV 480
Query: 498 SGLEMFIGQAYEQYERFTG 516
SG+EMFI QA Q+ FTG
Sbjct: 481 SGVEMFIRQALGQFRLFTG 499
>gi|224128592|ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 504
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/499 (48%), Positives = 339/499 (67%), Gaps = 17/499 (3%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
KN L+C P+ E+ +M+ M +A GADL E+RLD L +F+ ++ LIK+ +P+
Sbjct: 4 KNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSL-SFSHNSEVEKLIKQRTLPS 62
Query: 81 LFTYRPIWEGGQYDGDENER---VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+ ++R E + +++ + + VLRLA +L ++++++ +VA E + +
Sbjct: 63 IVSFR--LEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNT 120
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
K+IVSS+ PS E+L L+A +Q++GAD++K ITD+A VF + H Q+P+I
Sbjct: 121 KLIVSSYVNGRKPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLI 180
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
L +G RGLIS++L KFGGFL +G+L + V PG PT+ L +Y + DTKVFG
Sbjct: 181 ALAVGSRGLISQLLGPKFGGFLVYGSLSDKAV--PGMPTLLSLRQIYKLEYINADTKVFG 238
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
+I PVGHSK P+L+N AF+ G+NG++V + VDD+ +FF+TY+S+DFAGFS IPHKEA
Sbjct: 239 LISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEA 298
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
AV CCDEV +AKSIGAVN I+RR +DGKL GYNTD +ISAIED L +S
Sbjct: 299 AVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL---------TAS 349
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
L+GK FV+IGAGGAG+ALA+GAK++GARV+I NR Y+RAR LA+ V G AL L+ F
Sbjct: 350 PLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPYESLDRF 409
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
P +GMILAN ++IGM+P D++P+ K L LVFDAVYTP+ TRLLREA+E GA +V
Sbjct: 410 RPVNGMILANASAIGMEPNSDQSPVSKEILKACELVFDAVYTPRNTRLLREAKEVGAVVV 469
Query: 498 SGLEMFIGQAYEQYERFTG 516
SG+EMFI QA Q+ FTG
Sbjct: 470 SGVEMFIRQALGQFRLFTG 488
>gi|356533611|ref|XP_003535355.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 455
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/440 (54%), Positives = 321/440 (72%), Gaps = 14/440 (3%)
Query: 15 VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK 74
+ G+R+N T IC E V++ V +M KA GADLVE RLD LK+F+P ++ ++LI
Sbjct: 13 IRSGVRRNSTPICASTTAEWVEEKVFEMVKAKELGADLVEARLDFLKDFHPAQHHQSLIN 72
Query: 75 ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
P+P L TYRPI EGG+ DGDE++R D LR A+ELG++++D + A+ + SI GKKP
Sbjct: 73 NRPLPILITYRPIXEGGESDGDESQRQDALRQAIELGSEFVDDDR--AKGGSXSIGGKKP 130
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-----IT 189
E K+IVSSHN + TPSVE++ NL ARIQASGAD+VK ATTA D T + +F
Sbjct: 131 ESVKIIVSSHNLERTPSVEEIGNLAARIQASGADVVKIATTAFDNTXILNLFMKIFKKXX 190
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
QVP+IG+ M G+ +LCAKFGGFLTFG++E G +SAPGQ TIK+LLDLYNFRQ+
Sbjct: 191 KKKQVPMIGIAMRXEGIFVTVLCAKFGGFLTFGSVEAGAISAPGQXTIKELLDLYNFRQI 250
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
G TKV G +G P+ SKSP LYN FKSVGF+GV++ LLVD+++ F TYSS DF G++
Sbjct: 251 GVGTKVHGAVGNPISDSKSPHLYNATFKSVGFDGVYLPLLVDNVSDFLNTYSSPDFVGYN 310
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--- 366
TIP KE ++CCDE+D +AK+IGA++C+I+R +DGKL G N DY+GAI+AIE+ L
Sbjct: 311 YTIPPKENGLRCCDEIDPIAKAIGAISCMIKRPNDGKLLGNNFDYLGAIAAIEERLHLQD 370
Query: 367 -GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
R ++SG S L GKLFVV+GAGGAGKA+AYG K KGARVV+ANR Y +A+EL VG
Sbjct: 371 SNRRSISG--CSPLCGKLFVVMGAGGAGKAIAYGGKEKGARVVVANRIYAKAKELVTKVG 428
Query: 426 GHALSLADLENFNPEDGMIL 445
G A+++++LE+F+ + G++L
Sbjct: 429 GEAITISELESFHTK-GLVL 447
>gi|302842835|ref|XP_002952960.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
gi|300261671|gb|EFJ45882.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
Length = 564
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/510 (48%), Positives = 333/510 (65%), Gaps = 22/510 (4%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
IC + VD+ + ++ +A ASG D++E+RLD L +F+P ++++ + P+P + TYR
Sbjct: 24 ICTSVTATKVDEFIAEIQEAAASGVDIIELRLDFLTDFDPEQHLQRITSSCPLPYIVTYR 83
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKK-----PEKCKVI 140
P+WEGG+YDG E ER+ VL++A +GA Y+DVE + + F G P KVI
Sbjct: 84 PVWEGGKYDGPEPERLAVLKMAALMGAPYVDVEFKASPYFFAGETGWSQGRAVPLSTKVI 143
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
+S H++Q TP L L + ++A+GADIVK A A DITD AR+ + P+I L
Sbjct: 144 LSYHDFQQTPEPAVLDRLASAMRAAGADIVKLAAMANDITDAARMLDLLRKKDGPMIALS 203
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MGE+G I R+L AK+GG+LTF + SAPGQP I L L+ +R+ GP+TKV+GIIG
Sbjct: 204 MGEKGQIVRLLAAKYGGYLTFAAMSPERASAPGQPDIGKLAGLFGYRRQGPETKVYGIIG 263
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPHKEAAV 319
PV HSKSP+++N AF+ VGF+GV+V LLVDD+ +F + + DFAGFS TIPHKEAA+
Sbjct: 264 NPVSHSKSPLIHNTAFQHVGFDGVYVPLLVDDLERFLTAFKDHEDFAGFSVTIPHKEAAL 323
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-----------R 368
+ EVD VA+ IGAVN ++ RQ DG G+NTD++ AISAIE G+ G
Sbjct: 324 RLATEVDPVARQIGAVNTLV-RQPDGSFKGFNTDWLAAISAIEHGVAGEPGRAAAGAVEE 382
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
V+GG S L GK VVIGAGGAG+ALA+GA KGARVVIANR+ ++A LA +G A
Sbjct: 383 APVAGG-KSPLQGKTVVVIGAGGAGRALAFGAATKGARVVIANRSREKADLLAAALGSSA 441
Query: 429 LSLA--DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
S + DL + G +LAN+TS+GM P V+E+P+ Y +VFDAVY P TRLL
Sbjct: 442 TSCSWEDLVSGR-VTGDVLANSTSLGMTPHVEESPVGPEVAAKYKVVFDAVYNPLWTRLL 500
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
++A GA V GL+MF+GQA EQ+ FTG
Sbjct: 501 QDARAGGAVPVDGLQMFVGQALEQFRLFTG 530
>gi|255070969|ref|XP_002507566.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
gi|226522841|gb|ACO68824.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
Length = 517
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/513 (47%), Positives = 329/513 (64%), Gaps = 25/513 (4%)
Query: 33 ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQ 92
E +D+ +V +GAD+VE+R+D L++F +++ L+ VP + TYRP WEGGQ
Sbjct: 6 EEIDEAIV-------AGADIVELRIDFLRDFIAARDVRVLLDACSVPCIVTYRPTWEGGQ 58
Query: 93 YDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK--CKVIVSSHNYQYTP 150
Y GDE R+ VL A+ELGA Y+D EL+ A F + E+ K+I+SSHNY P
Sbjct: 59 YKGDEQHRLSVLWTAVELGAAYVDCELRAAGHFFAAAPNGVRERSTTKIILSSHNYDDVP 118
Query: 151 SVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPI----IGLVMGERGL 206
S +L + A+ +GADIVK A DIT +AR+ + ++ I L MGE G
Sbjct: 119 SEVELDEIHAQCVVAGADIVKIAAMVKDITQIARLENLLARAKSATGHKTIVLGMGEAGQ 178
Query: 207 ISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHS 266
+SR+L AKFG FLTFG L +G SAPGQPT+ L D+Y ++ +TKV G+IG P+ S
Sbjct: 179 VSRLLAAKFGSFLTFGALRSGAESAPGQPTLSQLRDIYRLQKQSTNTKVMGVIGNPISQS 238
Query: 267 KSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT--YSSNDFAGFSCTIPHKEAAVKCCDE 324
KSP+L+N + ++ G + +V LLV DI KF T + S+ F GFS TIPHKE+AV CC+E
Sbjct: 239 KSPVLHNISLEAAGLDACYVPLLVSDIRKFLSTPLFVSDSFTGFSVTIPHKESAVMCCEE 298
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVS-SALAGKL 383
+D VAK IGAVN ++ R +GK GYNTDY A+ AIE L+ S + L GK
Sbjct: 299 LDPVAKKIGAVNTLV-RLPNGKFKGYNTDYSAAVRAIERAYTSHLDGDMRDSETILRGKT 357
Query: 384 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
VV+GAGGAG++LA+GA KGA +++IANR+++RA+ LA GG A++L +L + G
Sbjct: 358 IVVVGAGGAGRSLAFGAAFKGAGKIIIANRSFERAKALAAACGGEAVALDELRD-GALKG 416
Query: 443 MILANTTSIGMQP-KVDETPIPKHAL--GHYALVFDAVYTPKITRLLREAEESGATIVSG 499
+LANTTS+GM P VDETP+PK AL + +VFDAVY P TRLLREA+E G T SG
Sbjct: 417 DVLANTTSLGMYPDSVDETPVPKEALQAAGFKVVFDAVYNPLETRLLREAKECGCTQASG 476
Query: 500 LEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVL 532
L+MF+GQA +Q+E FT GK A L + VL
Sbjct: 477 LDMFVGQAAQQFELFT---GKKAAESLMRKAVL 506
>gi|145352721|ref|XP_001420686.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580921|gb|ABO98979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 526
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/498 (50%), Positives = 326/498 (65%), Gaps = 15/498 (3%)
Query: 30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKESPVPTLFTYR 85
++ +++ + D+ A GAD+VE+R+D L++ R + I+ LIK SPVP + T R
Sbjct: 15 VIAPNLELALRDVDDAVRKGADVVELRVDFLRDDAARGTLGDAIEALIKASPVPVIVTNR 74
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREF---NDSIRGKKPEKCKVIVS 142
P WEGGQ DGDE+ R++ L A E GA Y+D E A F + + K K+I+S
Sbjct: 75 PTWEGGQDDGDESARLEALWRAHECGAAYVDCEALAAERFFAAKPATATLRNGKTKIILS 134
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI--TVHSQVPIIGLV 200
SHNY TP+ E L+ + A+ GADIVK A+ + DVAR+ ++ T ++ I L
Sbjct: 135 SHNYDETPNDEILAEIHAKCVRLGADIVKMASVCNAVEDVARLEKLLRTKGREIETIVLG 194
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
M E G +SR+L AKFG FLTFG + G SAPGQP +++L DLY TKV G+IG
Sbjct: 195 MSEHGQVSRLLAAKFGSFLTFGAIRRGEESAPGQPLLEELRDLYRVPTQTAATKVMGVIG 254
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT--YSSNDFAGFSCTIPHKEAA 318
P+GHSKSP L+N + G + +V LLV DI F + + S DF GFS TIPHKE A
Sbjct: 255 NPIGHSKSPALHNPCLAAAGVDACYVPLLVKDIKTFLASPLFGSKDFVGFSVTIPHKEDA 314
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
++CC EVD VAK IGAVN ++ RQ DG L GYNTDYV AI AIE+ + + V+ S
Sbjct: 315 LECCAEVDPVAKQIGAVNTLV-RQPDGSLKGYNTDYVAAIEAIENAMEKKTGVAAAKS-- 371
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
LAGK VVIGAGGAGKALA+GAK KGA VVIANR+ +RA+ LA+ GG A+SL DL + +
Sbjct: 372 LAGKTVVVIGAGGAGKALAFGAKFKGANVVIANRSVERAQALADACGGVAVSLEDLASGS 431
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G +LAN+TS+GMQP V++TP P LG +++VFDAVYTP TRLLREA+ SG I S
Sbjct: 432 VV-GDVLANSTSVGMQPNVEDTPTPASVLGGFSVVFDAVYTPLETRLLREAKASGCEIAS 490
Query: 499 GLEMFIGQAYEQYERFTG 516
GL+MF+GQA Q+E FTG
Sbjct: 491 GLDMFVGQAARQFELFTG 508
>gi|308810206|ref|XP_003082412.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
gi|116060880|emb|CAL57358.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
Length = 809
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/495 (49%), Positives = 319/495 (64%), Gaps = 13/495 (2%)
Query: 30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWE 89
++ SV ++D+ +A GAD+VE+R+D L+ RE + L+++ P + T RPIWE
Sbjct: 303 VVAPSVPIALLDVEEAIELGADVVELRMDFLERRG-REATEALLRKCERPAIVTNRPIWE 361
Query: 90 GGQYDGDENERVDVLRLAMELGADYIDVELQVAREF----NDSIRGKKPEKCKVIVSSHN 145
GG+ DGDE+ER+D L A ELGA Y+D EL A F DS + K K+I+SSHN
Sbjct: 362 GGRNDGDEDERLDSLWEAYELGAAYVDCELLAAERFFARAPDSFKSGGNGKTKIILSSHN 421
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV--PIIGLVMGE 203
Y+ TPS +L+ + A A+GADIVK A +I DV R+ ++ I L M E
Sbjct: 422 YEETPSDVELAKIHAACVAAGADIVKIACVCKEIEDVERLERLLRERGGEKETIALGMSE 481
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G +SR+L AKFG +LTFG + G SAPGQP + +L D+Y TKV G+IG P+
Sbjct: 482 HGQVSRLLAAKFGSYLTFGAIRRGAESAPGQPLLGELRDMYRVPTQTSSTKVMGVIGNPI 541
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT--YSSNDFAGFSCTIPHKEAAVKC 321
GHSKSP L+N + + +V LLV DI +F + + S DF GFS TIPHKEAA++
Sbjct: 542 GHSKSPALHNPCLAAANVDACYVPLLVKDIKQFLASPLFGSEDFVGFSVTIPHKEAALEA 601
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
C EVD VAK IGAVN ++ RQ DG L GYNTDY AI AIE + + + AL G
Sbjct: 602 CAEVDPVAKQIGAVNTLV-RQPDGSLKGYNTDYAAAIDAIEVAMEKKTGTPA--AKALEG 658
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
K VVIGAGGAGKALA+GAK KGA V+IANR+ +RA+ LA+ GG A+SL DL
Sbjct: 659 KTVVVIGAGGAGKALAFGAKFKGANVIIANRSVERAQALADACGGRAVSLEDLAEGR-AS 717
Query: 442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
G +LANTTS+GMQP + E+P P LG +++VFDAVYTP TRLLREA+E+G I SGL+
Sbjct: 718 GDVLANTTSVGMQPYIAESPAPASVLGDFSVVFDAVYTPLDTRLLREAKEAGCEIASGLD 777
Query: 502 MFIGQAYEQYERFTG 516
MF+GQA Q+E FTG
Sbjct: 778 MFVGQAARQFELFTG 792
>gi|356573042|ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 524
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/504 (45%), Positives = 324/504 (64%), Gaps = 9/504 (1%)
Query: 21 KNPTLICVPIMGE---SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP 77
K+ ++C PI + SV+++ DM +A A AD+VE+RLD + NF+P +KT+++ P
Sbjct: 8 KHSVMVCAPITTQQSVSVEQIANDMYQAKAEDADIVEVRLDCITNFHPXHELKTILQNKP 67
Query: 78 VPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC 137
+P L +P WEGG Y+GDEN +++ L+LA+ELGAD+I+V+L+ A + K+
Sbjct: 68 LPVLIVNQPKWEGGLYEGDENMQLEALQLAVELGADFIEVQLKAASCLPTLVEHKRNHNS 127
Query: 138 --KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
K+IVS + P E+L LV +Q + ADI+K T A DIT++ ++F + + QVP
Sbjct: 128 HGKIIVSCYVDGIIPPQEELLQLVELMQGTEADIIKLVTHAADITEIIKIFSLFPYCQVP 187
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
+I +GERGLIS++L KFGGF + +L + PG P++ ++ + Y + DTKV
Sbjct: 188 LIAYSVGERGLISQLLSQKFGGFFVYESLAGNPI--PGLPSLDNIQEAYKLEHVKADTKV 245
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
FG+I KP+ HSK PIL+N F+ + +NG++V + VDD+ +FF TY DF+GF IP+K
Sbjct: 246 FGLISKPISHSKGPILHNPPFRHINYNGIYVPMFVDDLKEFFNTYPCPDFSGFIVGIPYK 305
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E ++ CDEV +A+SIGAVN IIRR GKL GYNT AI+AIED L GG
Sbjct: 306 EEILRFCDEVHPLAQSIGAVNTIIRRARHGKLVGYNTHCEAAITAIEDALIEHGCNDGGA 365
Query: 376 S--SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
S S LAG+LFV++GAGGAG ALA+G+K++GA +VI + +DRA+ LA V G A +
Sbjct: 366 SLGSPLAGRLFVLVGAGGAGIALAFGSKSRGALLVIFDINFDRAKSLACAVFGEAQPFKE 425
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
L NF PE ILAN T +GM P D P+ + L LVFDAVY + TRLL+EA+ +G
Sbjct: 426 LVNFQPEKEAILANATPVGMLPNTDRIPVAEATLEDXRLVFDAVYRLRRTRLLKEADAAG 485
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
A V G+EMF+ QA Q+ FT L
Sbjct: 486 AITVGGVEMFLRQAIGQFNLFTSL 509
>gi|303272087|ref|XP_003055405.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463379|gb|EEH60657.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/497 (47%), Positives = 320/497 (64%), Gaps = 14/497 (2%)
Query: 30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR-ENIKTLIKESPVPTLFTYRPIW 88
++ +V + + ++ +A A GAD+VE+R+D + + +++ +++ PVP + TYRP W
Sbjct: 1 VIAPTVAEALTEIDEAVAGGADIVELRVDFIPTLDADGKDLTAMLERCPVPCIVTYRPTW 60
Query: 89 EGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRG--KKPEKCKVIVSSHNY 146
EGGQY G+E R+ L A+ELGA Y+D EL A F + K K+I+SSH+Y
Sbjct: 61 EGGQYAGEEEPRLAALWKAVELGAAYVDCELLAAERFFAAAPPGIKDASATKIILSSHDY 120
Query: 147 QYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARV---FQITVHSQVPIIGLVMGE 203
PS ++L+ + AR A+GAD+VK A DI DV R+ + S+ I L MGE
Sbjct: 121 DAVPSYDELAEIRARCVAAGADVVKIAAMVKDIVDVTRLQTLLEDAAGSRQDTIVLGMGE 180
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G +SR+L AKFG FLTFG L G SAPGQPT++ L DLY TKV G+IG P+
Sbjct: 181 AGQVSRLLAAKFGSFLTFGALRAGAESAPGQPTLRQLRDLYRVPTQTRATKVMGVIGNPI 240
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ--TYSSNDFAGFSCTIPHKEAAVKC 321
SKSP L+N + + G + +V LLV+DI F + T+ +D+ GFS TIPHKEAA++C
Sbjct: 241 AQSKSPALHNPSLAAAGVDACYVPLLVNDIEAFLKSATFGGDDYVGFSVTIPHKEAALRC 300
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
CDEVD VA IGAVN +++R DG GYNTDYV AI AIE + + + G L G
Sbjct: 301 CDEVDPVAAEIGAVNTLVKR-PDGTFKGYNTDYVAAIDAIEAAMNAKRGTASG--EVLRG 357
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
K VV+GAGGAG+ LA+GAK KGA V++ANR+ DRA+ LA GG A++L L +
Sbjct: 358 KTVVVVGAGGAGRGLAFGAKFKGADVIVANRSLDRAQALATACGGVAVTLEALAS-GAVK 416
Query: 442 GMILANTTSIGMQPKVDETPIPKHAL--GHYALVFDAVYTPKITRLLREAEESGATIVSG 499
G +LANTTS+GM PKVDETP PK A+ G + +VFDAVY P T+LLR+A+E G + SG
Sbjct: 417 GDVLANTTSVGMTPKVDETPTPKSAIAAGGFDVVFDAVYNPLETKLLRDAKEVGCELASG 476
Query: 500 LEMFIGQAYEQYERFTG 516
L+MF+GQA Q+E FTG
Sbjct: 477 LDMFVGQAALQFELFTG 493
>gi|159472414|ref|XP_001694346.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
gi|158277009|gb|EDP02779.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
Length = 554
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/505 (46%), Positives = 323/505 (63%), Gaps = 14/505 (2%)
Query: 22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTL 81
P+ IC + +V+ + ++ +A ASG D++E+RLD L +F+P ++++ +IK P+P +
Sbjct: 33 EPSYICTSVTATTVESFLAEIQEAAASGVDIIELRLDFLTDFDPEQHLEKIIKACPLPYI 92
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
TYRP+WEGG+Y+G E ER+ VL++A +GA Y+DVE + + F + P KVI+
Sbjct: 93 VTYRPVWEGGKYEGPEPERLAVLKMAALMGAPYVDVEFKASPYFFADPH-EVPLSTKVIL 151
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H+++ TP L+ L ++ +GADIVK A A DI D AR+ + + P+I L M
Sbjct: 152 SYHDFKQTPDAAVLNKLATAMRQAGADIVKLAAMANDIGDAARMLDLLRNKDGPMIALSM 211
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
GERG I R+L AK+GG LTF + SAPGQP I L L+N+R+ TKVFGIIG
Sbjct: 212 GERGQIVRLLAAKYGGHLTFAAMSPERASAPGQPDIGRLAGLFNYRKQSAATKVFGIIGN 271
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS-NDFAGFSCTIPHK--EAA 318
PV SKSP+++N AF+ +GF+GV+V LLVDD+ +F + +DFAGFS TIPHK EAA
Sbjct: 272 PVAQSKSPLIHNTAFQHIGFDGVYVPLLVDDLERFLAAFKDYDDFAGFSVTIPHKVREAA 331
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
++ +VD VA IGAVN +I RQ+DG GYNTD+ AISAIE GL G S
Sbjct: 332 LRAAKDVDPVAAQIGAVNTLI-RQADGSFKGYNTDWEAAISAIERGLAGNAGTPAA-ESP 389
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT-------YDRARELAETVGGHALSL 431
L G+ VVIGAGGAG+ALA+GA A+GARV+IANR+ + A+S
Sbjct: 390 LKGRTVVVIGAGGAGRALAFGAAARGARVLIANRSRDRADALAAALAAQYGSAAAAAVSY 449
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
DL G +LAN+TS+GM P +E+P+P G + +VFDAVY P TRLL +A+
Sbjct: 450 EDLAGGR-VVGDVLANSTSVGMAPNTEESPVPAAVAGQFKVVFDAVYNPLWTRLLLDAKA 508
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
GAT V GL+MF+GQA EQ+ FTG
Sbjct: 509 GGATPVDGLQMFVGQALEQFRLFTG 533
>gi|115436644|ref|NP_001043080.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|113532611|dbj|BAF04994.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|222618473|gb|EEE54605.1| hypothetical protein OsJ_01836 [Oryza sativa Japonica Group]
Length = 321
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/315 (63%), Positives = 251/315 (79%), Gaps = 2/315 (0%)
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MGE+GL+SR+L KFGG+LTFG+L+ VSAPGQPT+++L+D+Y+ R++GPDTKV G+I
Sbjct: 1 MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIA 60
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
PV SKSP+L+N +SVG+N V++ LL D+IA+F TYSS DF+GFSC++P K AV+
Sbjct: 61 NPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQ 120
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
CC E D VAKSIGA++ IIRR DGKL GYN DY+GAI AIEDG+ G + + V+ LA
Sbjct: 121 CCHEHDPVAKSIGAISTIIRR-PDGKLLGYNNDYIGAICAIEDGIGGPGSKNAAVTP-LA 178
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
G+L VV+GAGGAGKA+AYGAK KGAR+V+ANRTY++A LA VGGHAL LA+LE F PE
Sbjct: 179 GRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPE 238
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
+GMILAN TS+GM P VD TPIPK AL Y +VFDAVY PK+TRLLREAEE G +VSG+
Sbjct: 239 EGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGV 298
Query: 501 EMFIGQAYEQYERFT 515
EMF+ QA Q+ERFT
Sbjct: 299 EMFLRQALGQFERFT 313
>gi|386813870|ref|ZP_10101094.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403367|dbj|GAB63975.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 492
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/494 (42%), Positives = 302/494 (61%), Gaps = 24/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICVPI+ ++++ + D+ +A + AD+VE+R+D +K+ N + +K IK P + T
Sbjct: 1 MICVPIIADNLEDALKDIAEA-SEVADIVELRIDYIKDLNLKRLLKGCIK----PVIVTN 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP+ EGG++ G E +R+ +L+LA+EL DYIDVE ++ N++ K K IVS H
Sbjct: 56 RPVREGGKFTGSEEDRISLLKLAVELQVDYIDVEHDSIQKVNNT------GKTKRIVSYH 109
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
N+ TP +DL+ + R++ SGADI+K A ITD +++Q+ +P I MGE
Sbjct: 110 NFDKTP--DDLTGIFQRLKQSGADIIKIVPYANGITDNVKIYQLLQQVDMPTISFCMGEY 167
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+ISRIL KFG +LTF +L++G SAPGQ +I +LL+ Y+ R+ T ++G+IG PV
Sbjct: 168 GIISRILYKKFGSYLTFASLQSGKESAPGQVSIHELLNTYHVRRQDKHTSIYGLIGNPVS 227
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
HS SP ++N FK +GF+ ++V VD I F + + D G+S TIPHKE+ + D
Sbjct: 228 HSISPAIHNTLFKEMGFHNIYVPFKVDTIGNFIREFRGLDIKGYSVTIPHKESVMGHLDG 287
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA--LAGK 382
+D +AK IGAVN I+ R DG+L G+NTD A+ +ED NVSG + A L GK
Sbjct: 288 IDQIAKKIGAVNTIVNR--DGRLIGFNTDCEAAVRVLED----INNVSGMAAKAGSLQGK 341
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+ GAGG +A+A+G K + A++ I NR Y+RA+ LA V +DL +
Sbjct: 342 KVTLFGAGGVARAIAFGLKEREAQITIFNRNYERAQSLACEVDCFYRKFSDLPALEAD-- 399
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
I+ N TS+GM P V ETPI K+ L +VFD VY P TRLLR+A+ G V GL M
Sbjct: 400 -IVVNATSVGMFPSVHETPIDKNYLKPNMIVFDTVYNPPETRLLRDAKSLGCRTVGGLSM 458
Query: 503 FIGQAYEQYERFTG 516
F+ QA QY+ +TG
Sbjct: 459 FVHQAAAQYKLWTG 472
>gi|397911048|gb|AFO68800.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 246
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/250 (80%), Positives = 218/250 (87%), Gaps = 10/250 (4%)
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
+LYN+AFKSVGF+GV+VHLLVDDI KF +TYSS DF GFSCTIPHKEAA+ C DE+D VA
Sbjct: 1 LLYNQAFKSVGFDGVYVHLLVDDITKFLRTYSSPDFVGFSCTIPHKEAALGCLDEIDPVA 60
Query: 330 KSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA 389
KSIGAVNCIIR SDGKL GYNTDY GAISAIEDGL+ S LAGKLFVVIGA
Sbjct: 61 KSIGAVNCIIRSPSDGKLSGYNTDYFGAISAIEDGLQ----------SPLAGKLFVVIGA 110
Query: 390 GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT 449
GGAGKALAYGAK KGAR+VIANRTY+RARELAE VG ALSLA+L+ F+PEDGMILAN+T
Sbjct: 111 GGAGKALAYGAKEKGARIVIANRTYERARELAEIVGARALSLAELDTFHPEDGMILANST 170
Query: 450 SIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE 509
SIGMQPKVDETPIPK AL +Y+LVFDAVYTPK+TRLLREAEE GAT+VSGLEMFI QAYE
Sbjct: 171 SIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQAYE 230
Query: 510 QYERFTGLPG 519
QYERFTGLP
Sbjct: 231 QYERFTGLPA 240
>gi|384250424|gb|EIE23903.1| shikimate 5-dehydrogenase, partial [Coccomyxa subellipsoidea C-169]
Length = 514
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 236/519 (45%), Positives = 305/519 (58%), Gaps = 44/519 (8%)
Query: 30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKN---FNPRENIKTLIKES---PVPTLFT 83
+ ++V+ + ++ + GAD+VE+R+D LK+ FNP + L+ +P + T
Sbjct: 2 VTADTVNGAIAEIREVADFGADVVELRMDFLKDIDLFNPAAFLNPLLDACNAVRLPAIVT 61
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI-------RGKKPEK 136
+RP WEGGQYDG E R+ VL+ A LGA Y+DVE A F S G+ P
Sbjct: 62 FRPNWEGGQYDGPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPLT 121
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS--QV 194
KVI+S H+Y TPS E L LV + GADI K ATTA I D AR+ + S +
Sbjct: 122 TKVILSHHDYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGER 181
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTK 254
P+I L MGE+GL SR+L KFGG+LTFG L SAPGQPT+ +L LY + TK
Sbjct: 182 PVIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSATK 241
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
VFGI+G PV HS+SP L+N A + G + V+V LLVD++ F Y S F+G S TIPH
Sbjct: 242 VFGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAYPS--FSGISITIPH 299
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K AA++C D+ D VA IGA N ++ RQ G L YNTD+ AISA+E L G G
Sbjct: 300 KLAALECADDADPVAARIGAANTLV-RQPGGGLKAYNTDWSAAISAVEAALGGS---KAG 355
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT-----------YDRARELAET 423
SAL G VV+GAGGAGKALA+GA +GA V++ NR D A E A+
Sbjct: 356 GESALKGLRVVVVGAGGAGKALAFGAIERGAEVLVCNRQGHPCTFLIIQWTDMAVEYADV 415
Query: 424 VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
G G +L N+TSIGM PK +ETP+ ALG Y +VFDAVYTP T
Sbjct: 416 AAGKVA------------GDVLMNSTSIGMHPKENETPVSAGALGGYKVVFDAVYTPLET 463
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
LL++A++ G VSGLEMF+GQA EQ+E FTG P ++
Sbjct: 464 LLLKDAKDQGCITVSGLEMFVGQAAEQFELFTGKPAPLD 502
>gi|91200495|emb|CAJ73543.1| similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Candidatus Kuenenia stuttgartiensis]
Length = 499
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/512 (38%), Positives = 299/512 (58%), Gaps = 33/512 (6%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
+N +ICVPI+ + + + DM A + AD VE+R+D + + N R+ ++ + P
Sbjct: 2 QNKPMICVPIVANNNNDAIHDMECA-SKIADAVELRIDYIHDLNLRQ----ILGKCTKPV 56
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE----- 135
+ T RP+ EGG++ G E ER+ +L+ A++L ADY+D+E +DSIR K
Sbjct: 57 IVTNRPVREGGKFRGTEEERLQLLKQAIQLQADYVDIE-------HDSIRNVKKNGNALF 109
Query: 136 ---KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS 192
K K+IVS HN++ TP E+LS + + SGADIVK T A ITD +++Q+ S
Sbjct: 110 AASKTKIIVSYHNFRETP--ENLSEIYNTLFQSGADIVKIVTHANSITDNIKIYQLLQQS 167
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
++PII MGE G+ISRIL FG +LTF +L+ G SAPGQ I++LL+ YN +
Sbjct: 168 KIPIISFCMGEYGIISRILYKIFGSYLTFASLQKGKESAPGQINIEELLNRYNIKNQNKH 227
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T V+G+IG PV HS SP+++N FK +G N V+V VD+I +F + + +G+S TI
Sbjct: 228 TAVYGLIGNPVSHSISPVIHNALFKEIGMNCVYVPFKVDEIGRFISEFKKLNISGYSVTI 287
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE+ + D+ D +AK IGAVN ++ + + +L G+NTD A++ + + NVS
Sbjct: 288 PHKESIINYLDDADPIAKKIGAVNTVVNK--NNRLIGFNTDLEAAVTVLAE----VANVS 341
Query: 373 G--GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G + K +IGAGG +A+A+G K GA + + +R ++R + LA VG +
Sbjct: 342 GHTAADACFKNKHVTIIGAGGVARAIAFGLKMYGADITLVSRNHNRMQSLAGEVGCSFTN 401
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L+N + I N T +GM P ++ETP+ + L +VFD +Y P T+L+++A+
Sbjct: 402 KNGLQNLETD---IFVNATPVGMYPSINETPVDRKLLKPNMIVFDTIYNPPETKLIKDAK 458
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
E G V G+ MFI QA Q+ +T +N
Sbjct: 459 EIGCKTVGGMPMFIRQAAAQFRLWTDTEPPLN 490
>gi|262181541|gb|ACY29661.1| 3-dehydroquinate dehydratase 01 [Vitis vinifera]
Length = 222
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 192/220 (87%), Gaps = 3/220 (1%)
Query: 16 SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
SGGM KN TLICVPIMGE+++KMVVDM KA SGADLVE+RLD LK FNPR++++ LI++
Sbjct: 3 SGGMSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRK 62
Query: 76 SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
P+PTLFTYRP WEGGQY+GDEN R D LRLAMELGADY+D+EL+VA EF +SI G+KPE
Sbjct: 63 CPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPE 122
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ-- 193
K KVIVSSHNYQ TPSVEDL NLV IQA+GADIVK ATTAL+ITDVAR+FQITVHSQ
Sbjct: 123 KFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182
Query: 194 -VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAP 232
VP+IGLVMGERGLISRILC KF G+LTFG+LE GIVSAP
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAP 222
>gi|326526517|dbj|BAJ97275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/267 (59%), Positives = 209/267 (78%)
Query: 20 RKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVP 79
+++ TL+CVP++G +V++M +D A A+G DLVEIRLD ++ F PRE++ L+ P+P
Sbjct: 5 KEDMTLLCVPLVGRTVEEMKIDAAAAAAAGGDLVEIRLDYIEGFRPREDLPRLLHSCPLP 64
Query: 80 TLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
L TYRP WEGG+Y+GD+ R + L LAMELG DY+D+EL+VA +F D + G KP+KCK+
Sbjct: 65 VLVTYRPNWEGGRYEGDDATRFETLSLAMELGVDYVDIELKVADKFVDFLSGTKPDKCKL 124
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGL 199
IVSSHNY+ TPS E+L+NLVARIQ GADIVK ATTA DI DV+R+FQ+ VH QVP+IGL
Sbjct: 125 IVSSHNYESTPSCEELANLVARIQEVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGL 184
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
VM ERGL+SR+L KFGG+LTFG L+ SAPGQPT+++LLD+YN R +GPDTKV G+I
Sbjct: 185 VMSERGLMSRVLSPKFGGYLTFGILDATKTSAPGQPTLEELLDIYNIRCIGPDTKVLGLI 244
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFV 286
PV SKSPIL+N+ +SVG+N + V
Sbjct: 245 ANPVKQSKSPILHNKCLQSVGYNAMQV 271
>gi|224128596|ref|XP_002320371.1| predicted protein [Populus trichocarpa]
gi|222861144|gb|EEE98686.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 241/325 (74%), Gaps = 5/325 (1%)
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
Q+P+I L +G RGLIS++L KFGGFL +G+L + V PG PT+ L +Y + D
Sbjct: 1 QIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAV--PGMPTLLSLRQIYKLEYINAD 58
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
TKVFG+I PVGHSK P+L+N AF+ G+NG++V + VDD+ +FF+TY+S+DFAGFS I
Sbjct: 59 TKVFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGI 118
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-RLNV 371
PHKEAAV CCDEV +AKSIGAVN I+RR +DGKL GYNTD +ISAIED L G +L +
Sbjct: 119 PHKEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDALTGTKLII 178
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
V S L+GK FV+IGAGGAG+ALA+GAK++GARV+I NR Y+RAR LA+ V G AL
Sbjct: 179 L--VPSPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPY 236
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
L+ F P +GMILAN ++IGM+P D++P+ K L LVFDAVYTP+ TRLL+EA+E
Sbjct: 237 ESLDRFRPVNGMILANASAIGMEPNSDQSPVSKETLKACELVFDAVYTPRNTRLLQEAKE 296
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
A +VSG+EMFI QA Q+ FTG
Sbjct: 297 VVAVVVSGVEMFIRQALGQFRLFTG 321
>gi|424513634|emb|CCO66256.1| predicted protein [Bathycoccus prasinos]
Length = 562
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 226/509 (44%), Positives = 297/509 (58%), Gaps = 43/509 (8%)
Query: 45 ANASGADLVEIRLDGLKNF------NPRENIKTLI----KESPVPTLFTYRPIWEGGQYD 94
+N S D+VE+R+D L+ +E I L+ K + +P + T+RP WEGGQ D
Sbjct: 36 SNNSRPDIVELRVDFLEKSIRSDERKMKEAIGQLVEACEKVAKIPCVVTFRPTWEGGQDD 95
Query: 95 GDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI--------VSSHNY 146
GDE R+ L GA Y+D EL F + K E+ VI SSH Y
Sbjct: 96 GDEETRLRCLWEGFRAGATYVDCELLAIERF---AKAKPDERDGVIKGPGQMLICSSHEY 152
Query: 147 QYTPSVEDL-SNLVARIQASG-ADIVKFATTALDITDVARVFQITVHSQ---VPIIGLVM 201
+ TPS++ L +I+A+ DI K A DI DV R+ ++ ++ P L M
Sbjct: 153 ELTPSLDVLLKEKYEKIRANDMCDIAKIACVCQDINDVGRLAKVLEKARGDGYPCAVLGM 212
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR-QMGPDTKVFGIIG 260
E GLISR+L K G +LTFG++ G SAPGQPT++DL +LY +TK+ G++G
Sbjct: 213 SEHGLISRLLATKLGSYLTFGSIRAGFESAPGQPTLRDLSELYRVNTSQTRETKILGVMG 272
Query: 261 KPVGHSKSPILYNEAFKSVGFNG-VFVHLLVDDIAKFFQTYS-----SNDFAGFSCTIPH 314
P+ SKSP L+N+A S + +V LLV D A+F + S +ND+ GFS TIPH
Sbjct: 273 NPIAQSKSPQLHNKALISAKVDDKCYVPLLVKDFAEFVENESLFNNKNNDWVGFSVTIPH 332
Query: 315 KEAAVKCCDE-VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG---RLN 370
KE+A+K C E VD VAK IGAVN ++R Q DG GYNTDYV AI AIE L R
Sbjct: 333 KESALKFCGENVDPVAKQIGAVNTLVR-QKDGSFRGYNTDYVAAIGAIEKALDPTIPRDA 391
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
S AL GK +V+GAGGA + LA+GAK K A VV+ANR+ DRA LAE GG ++S
Sbjct: 392 AETTDSKALKGKTVLVLGAGGAARGLAFGAKFKEANVVVANRSKDRADALAEACGGTSIS 451
Query: 431 LADLE--NFNPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALV--FDAVYTPKITRL 485
+ D+ NF ++ANTTS+GM +V+ETP PK A+ V FDAVY P TRL
Sbjct: 452 VEDVASGNFGDLKIDVIANTTSLGMVGERVNETPCPKEAIKKSGAVVCFDAVYNPLETRL 511
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERF 514
LREA+E G T+ SGL+MF+GQA Q+E F
Sbjct: 512 LREAKECGLTVASGLDMFVGQAARQFELF 540
>gi|452825796|gb|EME32791.1| bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase
[Galdieria sulphuraria]
Length = 521
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 293/508 (57%), Gaps = 26/508 (5%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
L+CVPI + V + + +A GADLVE+RLD L + E + L+K VP + T
Sbjct: 4 CLLCVPITAQYVKEAFEQIKEAQRLGADLVELRLDLL---DSTEEWEDLVKHCFVPKIAT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKC--KVIV 141
RP WEGG Y+G E+ R+ +L A +LG +Y+DVEL+ F +KP C K+I+
Sbjct: 61 CRPHWEGGNYNGSESRRLSILSEACKLGCEYVDVELEAITRF------EKPSNCHTKLIL 114
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H + S ++L+N + + ++ AD++K A +I +F S+VP I L M
Sbjct: 115 SRHLWNRPFSHQELANTYSSMLSNQADVIKVACKIDNIEQCEILFHFIAASKVPCIALGM 174
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
GE G ISRIL ++G FLTF +L G SAPGQ + D + +Y + + TK++G++G
Sbjct: 175 GEAGQISRILAGRYGAFLTFASLSKGKESAPGQIELNDCIQMYRLKSLSSSTKLYGVVGN 234
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
PV HS SP ++N AF S+ + V+ L V+D ++ + F G S TIPHKE A +
Sbjct: 235 PVAHSMSPAIHNLAFASLSLDCVYCPLAVEDFGSCWKMLNEMGFMGLSVTIPHKETAKRY 294
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL---RGRLNVSGGVSS- 377
DE+D +A IGA+N +++ + K GYNTD + A+SAIEDGL R +S +S
Sbjct: 295 VDELDGLALKIGAINTMVKLERGWK--GYNTDCLAAVSAIEDGLIAQRSSSELSHRTNSF 352
Query: 378 ---ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
A A L +++GAGGA +A+A+G + + + NR YDR ++LA +G A+ L
Sbjct: 353 STQAGAKPLVLILGAGGAARAIAFGLLERSYNIYVVNRNYDRCKKLAAELGIEAIPWEGL 412
Query: 435 ENFNPE--DGM-ILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYTPKITRLLRE 488
F E D + ++ +TSIGM P V +TP+ +L LVFD VY P TR LRE
Sbjct: 413 RRFLLEHKDSIDVIIQSTSIGMHPNVHDTPLSFDDLQSLSKKPLVFDVVYNPVETRFLRE 472
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A E G +VSGLEMF+ QA Q+E +TG
Sbjct: 473 AREVGCYVVSGLEMFVRQAVYQFELWTG 500
>gi|262181533|gb|ACY29657.1| 3-dehydroquinate dehydratase 02 [Vitis vinifera]
Length = 187
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/187 (84%), Positives = 173/187 (92%)
Query: 108 MELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGA 167
MELGADY+D+EL+VA EF +SI G+KPEK KVIVSSHNYQ TPSVEDL NLV IQA+GA
Sbjct: 1 MELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGA 60
Query: 168 DIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENG 227
DIVK ATTAL+ITDVAR+FQITVHSQVP+IGLVMGERGLISRILC KF G+LTFG+LE G
Sbjct: 61 DIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPG 120
Query: 228 IVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH 287
IVSAPGQPTIKDLL+LYNFRQ+GPDTKVFG+IGKPV HSKSP LYNEAFKSVGFNGV+VH
Sbjct: 121 IVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVH 180
Query: 288 LLVDDIA 294
LLVDDIA
Sbjct: 181 LLVDDIA 187
>gi|449017210|dbj|BAM80612.1| fusion protein of 3-dehydroquinate dehydratase and shikimate
5-dehydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 214/525 (40%), Positives = 302/525 (57%), Gaps = 28/525 (5%)
Query: 15 VSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI 73
VSG G+R LIC I S ++ + DM +A +GADLVE R D L E+ + ++
Sbjct: 3 VSGAGIR---CLICTSITANSAEEAIADMYEARRAGADLVEFRADYLAEG---ESWERVV 56
Query: 74 KESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN--DSIRG 131
+ P+P +FTYRP+ EGG D +++ERV +L+ A++ G +Y+DVEL F +S++
Sbjct: 57 DQRPLPMVFTYRPVCEGGLSDMNDHERVRLLQRAVQHGVEYVDVELANMDLFRMPESVQL 116
Query: 132 KKPE-KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV 190
+ + ++IVS H++ + +L+ + I A+GADI K A D+ D AR+F +
Sbjct: 117 QDASTRPRLIVSYHSFTRPLTEAELAEIYTAIVATGADICKIAMMCHDLCDNARLFALLK 176
Query: 191 HS--QVPIIGLVMGERGLISRILCAKFG-GFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247
+ P I + MGE G ISR+L AKFG LTF TL SAPGQ I++L+D Y F
Sbjct: 177 RTAGSKPTIAIGMGEYGQISRVLAAKFGPAMLTFTTLSEARASAPGQFRIEELIDHYRFH 236
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD---IAKFFQTYSSND 304
+ PDT V+G+IG PV HS SP ++N AF N V++ LV D + KF T +
Sbjct: 237 SLNPDTTVYGVIGAPVRHSMSPRIHNHAFGLCRLNHVYLPFLVQDGSKLQKFLDTMTQFG 296
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G S TIPHK+ ++C DE+D VAK IGAVN I+ G+ GYNTD+ A+ A+ +
Sbjct: 297 LRGASVTIPHKQRIMECLDELDDVAKQIGAVNTIVVDPLTGRRKGYNTDWQAAVDAVSET 356
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAET 423
L + +AL + V++GAGGA +A+A+G G ++ I NRT +RAR LA
Sbjct: 357 LMPGIEQGQARLTALQRRHVVLLGAGGAARAIAFGVVHCGCGKLTIVNRTLERARSLAND 416
Query: 424 VGGH------ALSLADL--ENFNP---EDGMILANTTSIGMQPKVDETPIPKHALGHYAL 472
+ ALSL D + NP E IL N+TSIGM P V+ P+P+ L + L
Sbjct: 417 LSPFGKTELVALSLEDFCQQQRNPATRERIDILMNSTSIGMHPDVNVVPVPEEILEPHCL 476
Query: 473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VFDAVY P TRLL A+ G V G+EMF+ QA Q+ +TGL
Sbjct: 477 VFDAVYNPIETRLLSLAKRRGCLTVDGVEMFVRQAAAQFTIWTGL 521
>gi|192758420|gb|ACF05190.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Spirogyra
varians]
Length = 520
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 201/515 (39%), Positives = 308/515 (59%), Gaps = 31/515 (6%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
M NP ++C + G++V+++ + ++ + GAD VEIRLD + F + + +LI S +
Sbjct: 1 MAPNPCIVCAELTGKNVEEIKSQICRSKSEGADAVEIRLDLIHGFE-LDQLSSLIP-SDI 58
Query: 79 PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
++ +YR + E+ ++ L A+ELG+D+++V+ ++A +F G K K
Sbjct: 59 ISVVSYR------SKEVSEDLKLAALHKAVELGSDFVEVDYELAEKFFSKPLGGA--KSK 110
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
+IV+S NY+ TP V++L L A+++ + ADIVK T A DI+D A++F+ ++ P I
Sbjct: 111 IIVASFNYESTPPVDELIALAAKLKETKADIVKIITAANDISDTAKIFKFLDTTKTPTIS 170
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
+ RG ISR+L KF FLT+ L++ SA PT+ D + +Y +++ +KVFG+
Sbjct: 171 FALAARGEISRLLAPKFNSFLTYAYLDDKSGSAQELPTVYDAVHVYQIKRLTRQSKVFGV 230
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF-AGFSCTIPHKEA 317
+G P+ S+ +LYN + F+G+++ LVDD+ FF+T++ D AG S T PH++
Sbjct: 231 VGNPISQSRGYLLYNAGMIAKNFDGIYLPFLVDDVRLFFKTFNMPDLIAGTSVTAPHRQI 290
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
A+ C DEVD AK+IGAV+ I+RR DG + GYN D+ AI A+E GL L SGG +
Sbjct: 291 AMDCIDEVDPAAKAIGAVSAILRR-PDGTMIGYNMDWGAAIYAVEQGL---LEHSGGKAE 346
Query: 378 A---LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
L G L V+ GAGGAG+ LAYG K KG +++A+ DRA+E+A T GG S+ +L
Sbjct: 347 GKGPLEGVLLVLAGAGGAGRGLAYGVKEKGGYLLVADLDLDRAQEVATTFGGDVTSVKEL 406
Query: 435 ENFNP------------EDGMILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 481
+ + +L + T +GM+P VD T AL Y++VFDAVY P
Sbjct: 407 TAPDAFEKTLKKFCGHLKKAPVLCHATPVGMKPHVDRTIFADVSALKGYSVVFDAVYNPA 466
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRL REA+ G T VSG+EMF+ +A EQ+E FTG
Sbjct: 467 ETRLQREAKSIGVTTVSGVEMFLREADEQFELFTG 501
>gi|325110056|ref|YP_004271124.1| 3-dehydroquinate dehydratase [Planctomyces brasiliensis DSM 5305]
gi|324970324|gb|ADY61102.1| 3-dehydroquinate dehydratase; shikimate dehydrogenase [Planctomyces
brasiliensis DSM 5305]
Length = 496
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 272/494 (55%), Gaps = 21/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV + + M + + +GA LVE+RLD LK+ N +I L+K+ P T+ T
Sbjct: 1 MICVSVGRTRLKMMRAEHEALSRAGAQLVELRLDWLKHVN---DISLLLKDRPTATVITC 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R + G++ G E+ER +LR A+ G +++D+E+ +A+ + K + IVS H
Sbjct: 58 RRAEDQGKWRGSEDERQKLLRAAIVDGVEFVDIEVDIAKSI------PRYGKTRRIVSYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
N++ TP ++L + +I AS D+ K T A D R+ ++ S++P +G MGE
Sbjct: 112 NFEETP--DNLEEIHKQIAASDPDVAKIVTMANSPADGVRMLELVAKSKIPTVGFCMGEF 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GL +R+LC K+G T+ + + APGQ + +++L+LY Q+ DT+VFG++G P+
Sbjct: 170 GLFTRVLCTKYGAPFTYASFSSERELAPGQISFREMLELYRHDQIDVDTRVFGVLGDPIA 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP L+N+AF++ N V++ + + + + GFS TIPHKE V
Sbjct: 230 HSYSPRLHNDAFEAEKINAVYLPFRISEQHFEDSMRALRRLNTEGFSITIPHKERIVTQA 289
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
D D AK IGA N + R Q G F NTD+ A++A LR +G +
Sbjct: 290 DHTDDDAKEIGAANTLYRNQK-GIWFATNTDFEAAMTA----LRQATKKAGWPEGGFKDR 344
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+++GAGG +A+ +G G ++V+ RT RA+ELAE +G S + PE
Sbjct: 345 KVLILGAGGVARAIGHGVVRGGGQLVVTGRTRSRAKELAEKLGCQHCSWENRGAQRPE-- 402
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
+L N T IGM P +DETP +H + +VFD +Y P+ T L+++A E I SGLEM
Sbjct: 403 -VLINCTPIGMFPNMDETPYEQHWMTDGMVVFDTIYNPENTLLVKQARERDCHIASGLEM 461
Query: 503 FIGQAYEQYERFTG 516
FI QA Q+E FTG
Sbjct: 462 FIRQAAAQFECFTG 475
>gi|449134129|ref|ZP_21769633.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
gi|448887232|gb|EMB17617.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
Length = 496
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 274/494 (55%), Gaps = 22/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV + +M+ + GA LVE+RLD + ++K L+ + P P + T
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISRA---VDLKRLLNDRPGPVVATV 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG+++ E +R+ +LR + GA+Y+D+E VA + + K I+S H
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
++ TP E+L L + A ADIVK A A +D R+ + ++++P IG+ MGE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+++RIL + G T+ T + APGQ K++ +Y++ + DT +FG+I PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP+++N AF G N ++ L V DD+ F +T G S TIPHKE+A++ C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ ++ IGA+N +I D GYNTDY A+ IE+ + + G ++L GK
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFK----IERGTENSLQGK 343
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+V+GAGG +A+A+G + + V I++RT +RA LA +G + D E +
Sbjct: 344 TALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVI---DWEERHEAKV 400
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
+L N T IGM P VD TP + AL + +VFD VY P+ T L+++A + + +++G++M
Sbjct: 401 QLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITGVDM 460
Query: 503 FIGQAYEQYERFTG 516
F+ QA QY+ FTG
Sbjct: 461 FVRQAAYQYKLFTG 474
>gi|296122090|ref|YP_003629868.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014430|gb|ADG67669.1| 3-dehydroquinate dehydratase, type I [Planctomyces limnophilus DSM
3776]
Length = 517
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 282/495 (56%), Gaps = 27/495 (5%)
Query: 26 ICVPIMGESVDKMVVDMGKANAS-GADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
ICV I G + +M++ +A A GA+LVE+R+D L P ++K L+ + P PT+ T
Sbjct: 5 ICVGI-GRTRHQMMIAEHQALAQKGAELVELRVDYLSR-TP--DMKRLLADRPTPTIVTC 60
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R + + G++ G E ER +LR A+ GADY+D+E +A + ++ K K I+S H
Sbjct: 61 RRVADRGRFRGTEEERQTILRTAILSGADYVDIEADIAPQI------RRYGKTKRIISHH 114
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
++ TP +DL A++ AD+VK T A D R+ ++ +QVP +G MGE+
Sbjct: 115 DFDQTP--DDLEEKYAQMCKLDADLVKIVTMANRAEDCVRMLKLVEGAQVPTVGFCMGEK 172
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+++R+LC FG T+ T APGQ + ++ ++ + Q+ T + G++G PV
Sbjct: 173 GMLTRVLCGAFGSPFTYATFNKERELAPGQFSFDEMRKMFRYEQITRKTILLGVLGDPVA 232
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP+L+N + GF+GV++ L V ++++ Y F G+S TIPHKE+ ++
Sbjct: 233 HSLSPLLHNTLMRKAGFDGVYLPLRVSASELSETLDAYEQLGFTGYSATIPHKESVLQKY 292
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
D ++IGA N + R Q+ G NTDY A+ AI GL+ +L GK
Sbjct: 293 PMCDDFVRAIGAANTVYRDQA-GHWACSNTDYQAALDAILSGLKP--------GESLTGK 343
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+++GAGGA KA+ + A V+A+RT R++ LA+ +GG A++ EN E
Sbjct: 344 RVLLLGAGGAAKAIGMAMQKSEAITVVASRTLKRSQALADQIGGRAIT---WENRGSEFA 400
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
IL N T +GM P ++E+P P H L LVFD +YTP+ T L+++A + G T V+G+EM
Sbjct: 401 DILINCTPVGMHPNLNESPFPIHWLREGMLVFDTIYTPERTLLIKDARDRGCTTVTGVEM 460
Query: 503 FIGQAYEQYERFTGL 517
FI QA Q+ FTGL
Sbjct: 461 FIRQATAQFRLFTGL 475
>gi|32474293|ref|NP_867287.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|417304128|ref|ZP_12091163.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
gi|32444831|emb|CAD74833.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|327539589|gb|EGF26198.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
Length = 496
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 274/494 (55%), Gaps = 22/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV + +M+ + GA LVE+RLD + ++K L+ + P P + T
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISRA---VDLKRLLNDRPGPVVATV 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG+++ E +R+ +LR + GA+Y+D+E VA + + K I+S H
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
++ TP E+L L + A ADIVK A A +D R+ + ++++P IG+ MGE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+++RIL + G T+ T + APGQ K++ +Y++ + DT +FG+I PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP+++N AF G N ++ L V DD+ F +T G S TIPHKE+A++ C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ ++ IGA+N +I D GYNTDY A+ IE+ + + G ++L GK
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFK----IERGTENSLQGK 343
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+V+GAGG +A+A+G + + V I++RT +RA LA +G + D E +
Sbjct: 344 TALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVI---DWEERHEAKV 400
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
+L N T IGM P VD TP + AL + +VFD VY P+ T L+++A + + +++G++M
Sbjct: 401 QLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITGVDM 460
Query: 503 FIGQAYEQYERFTG 516
F+ QA Q++ FTG
Sbjct: 461 FVRQAAYQFKLFTG 474
>gi|421613663|ref|ZP_16054736.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
gi|408495622|gb|EKK00208.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
Length = 496
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 273/494 (55%), Gaps = 22/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV + +M+ + GA LVE+RLD + ++K L+ + P P + T
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISRA---VDLKRLLNDRPGPVVATV 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG+++ E +R+ +LR + GA+Y+D+E VA + + K I+S H
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
++ TP E+L L + A ADIVK A A +D R+ + ++ +P IG+ MGE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNANIPTIGICMGEI 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+++RIL + G T+ T + APGQ K++ +Y++ + DT +FG+I PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP+++N AF G N ++ L V DD+ F +T G S TIPHKE+A++ C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ ++ IGA+N +I D GYNTDY A+ IE+ + + G ++L GK
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFK----IERGTENSLQGK 343
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+V+GAGG +A+A+G + + V I++RT +RA LA +G + D E +
Sbjct: 344 TALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVI---DWEERHEAKV 400
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
+L N T IGM P VD TP + AL + +VFD VY P+ T L+++A + + +++G++M
Sbjct: 401 QLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITGVDM 460
Query: 503 FIGQAYEQYERFTG 516
F+ QA Q++ FTG
Sbjct: 461 FVRQAAYQFKLFTG 474
>gi|440716706|ref|ZP_20897210.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
gi|436438203|gb|ELP31763.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
Length = 496
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 274/494 (55%), Gaps = 22/494 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV + +M+ + GA LVE+RLD + ++K L+ + P P + T
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISRA---VDLKRLLNDRPGPVVATV 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG+++ E +R+ +LR + GA+Y+D+E VA + + K I+S H
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
++ TP E+L L + A ADIVK A A +D R+ + ++++P IG+ MGE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G+++RIL + G T+ T + APGQ K++ +Y++ + DT +FG+I PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP+++N AF G N ++ L V DD+ F +T G S TIPHKE+A++ C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ ++ IGA+N +I D GYNTDY A+ IE+ + + G ++L GK
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFK----IERGTENSLQGK 343
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+V+GAGG +A+A+G + + V I++RT +RA LA +G + D E +
Sbjct: 344 TALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEILAADIGCRVI---DWEERHEAKV 400
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
+L N T IGM P VD TP + AL + +VFD VY P+ T L+++A + + +++G++M
Sbjct: 401 QLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITGVDM 460
Query: 503 FIGQAYEQYERFTG 516
F+ QA Q++ FTG
Sbjct: 461 FVRQAAYQFKLFTG 474
>gi|451981182|ref|ZP_21929555.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
gi|451761592|emb|CCQ90808.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
Length = 495
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 280/498 (56%), Gaps = 33/498 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLFT 83
+ICVPI+G ++D+ + D+ A AD +E RLD + P ++ LI+ + P + T
Sbjct: 1 MICVPIVGPTMDRALEDI-DACRKVADFIEFRLDLI----PGHDLPRLIEAAGDTPYIVT 55
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
R +GGQ+ G E ERV V++ A+ELGA YID+E E S+ K K K I+S
Sbjct: 56 NRAKMDGGQFPGTEEERVAVIKQAIELGAMYIDIETSTPPELLRSVLENK-GKSKAILSH 114
Query: 144 HNYQYTPS-VEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS---QVPIIGL 199
H++ T V+ L L+ ++ A D++K T A D++D R+ Q+ + +V +I
Sbjct: 115 HDFTRTDDKVDALYELMTQMPA---DVLKIITYAQDLSDNLRLLQLLSRARRDEVKLIAF 171
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
MGE+G +SRIL +GG+LTFG+L+ G SAPGQ L +Y ++ D+K+FG+I
Sbjct: 172 CMGEKGEVSRILSPMYGGWLTFGSLDRGKESAPGQIPATTLKHIYRVNELNLDSKIFGVI 231
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
G PV S +++N AF + V+V V + +FF TY + F G S T+P KE +
Sbjct: 232 GDPVNKSMGYLIHNRAFSELNLPNVYVPFWVKSLTRFFNTYQAY-FTGLSVTMPFKEDIM 290
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
K + +D +A+ IGAVN ++R +D GYNTD GA+SA+ + L
Sbjct: 291 KHMNRIDPLAQKIGAVNTVVREGND--WVGYNTDVTGALSALT------------AVTEL 336
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHALSLADLENFN 438
G ++IGAGG KA+ +G +GA + + NR ++A LA+ + +S+ D++
Sbjct: 337 KGTRVLIIGAGGTAKAIGHGVTEQGAALTLTYNRNKEKAEALAQELNAKLISIRDIDAHE 396
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
+ I+ N + GM P +TP P L +VFD+VY P TRL+++A E G T++
Sbjct: 397 TD---IVINCSPAGMTPNTKDTPYPARLLKPGMVVFDSVYNPMETRLIKDAREKGCTVIP 453
Query: 499 GLEMFIGQAYEQYERFTG 516
G+E+F+ QA EQ + +TG
Sbjct: 454 GIELFVNQAIEQLKLWTG 471
>gi|406829999|ref|ZP_11089593.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 492
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 273/502 (54%), Gaps = 29/502 (5%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV I M+ + GA LVE+R+D L +P ++ L+K+ P P + T
Sbjct: 1 MICVSIARTRHRMMIAEHHALAERGAQLVELRIDWLAR-DP--DVPRLLKDRPTPVIVTC 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE--KCKVIVS 142
R +GG++ G E R+ +LR A+ GADY+D+E D I P K K IVS
Sbjct: 58 RRAQDGGKWRGTEEARIRLLRTAIVSGADYVDLE--------DDIASSIPRYGKTKRIVS 109
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
H++ TP + + + A I DI+K T A +D R+ ++ +++P + MG
Sbjct: 110 HHDFNGTP--DHIEEVWAEIAEMNPDIIKVVTLANSPSDCVRMLKLVKDAKIPTVAFCMG 167
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
+ G+ SR+ C K G T+ T APGQ + +D+ +Y++ + T++FG+IG P
Sbjct: 168 DFGVWSRVACGKLGSPFTYATFSQDREVAPGQLSFQDMKHIYHYETINAKTQLFGVIGDP 227
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
+GHS SP+L+NEA + +GFNGV+V L V D + + + DF G S TIPHKEA +
Sbjct: 228 IGHSLSPLLHNEAMRKIGFNGVYVPLRVARDQLTQTLADLETLDFRGLSVTIPHKEAVLA 287
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
+ + IGA N + R SD + +NTDY A+ +++ L L
Sbjct: 288 KFPRCEEFVRQIGAANTLF-RGSDNQWQSFNTDYQAALDSVKLAL--------PTGDTLE 338
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
GK +++GAGGA +A+ G G +VI +RT RA+ LAE + ++ EN E
Sbjct: 339 GKRVLLLGAGGAARAIGMGITRAGGALVITSRTSARAKTLAEQLNCRHVT---WENRGAE 395
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
IL N T +GM P++D+TP ++ L +VFD +YTP+ T L++EA+ G VSG+
Sbjct: 396 YADILINCTPVGMYPEMDQTPFQQNWLREGMIVFDTIYTPENTLLIKEAQVRGCKTVSGI 455
Query: 501 EMFIGQAYEQYERFTGLPGKMN 522
EMFI QA Q+ERFTG P ++
Sbjct: 456 EMFIRQAAAQFERFTGKPASLD 477
>gi|283781777|ref|YP_003372532.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440230|gb|ADB18672.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
Length = 495
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 278/502 (55%), Gaps = 29/502 (5%)
Query: 26 ICVPIMGESVDK-MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
ICV I+G K M+ + GA LVE+RLD + + N++ L+ E P P + T
Sbjct: 3 ICV-IVGRGRHKHMIAEHKHLGEVGAQLVELRLDYIMS---DVNLRRLLPERPTPVVITV 58
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE--KCKVIVS 142
R +GG++ E++R +LR A+ G +Y+D+E + I G P K K IVS
Sbjct: 59 RRQRDGGRWSRSEDQRQVLLRQAIASGVEYVDLE--------EDIAGSIPRFGKTKRIVS 110
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
HN+Q TP E+L+ L R+ ADIVK AT A +D R+ Q+ +++P + + MG
Sbjct: 111 YHNFQETP--ENLAALHERMSKLDADIVKIATMAHTPSDTTRLVQLMKGAKIPTVAIAMG 168
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
E G SRIL KFG LT+ + APGQ + + + +Y++ + DT+VFG++ P
Sbjct: 169 EIGTPSRILGGKFGSPLTYAAFSSDRELAPGQLSYEQMRAVYHYDDINADTEVFGVVADP 228
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
VGHS SP+L+N AF+++ N V++ L V + +AKF Q G S TIPHKE ++
Sbjct: 229 VGHSMSPLLHNAAFRALSMNRVYLPLRVPREHLAKFLQDCPELGIKGLSVTIPHKEEVIQ 288
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
+ D I A N +I ++ GK GYNTDY ++++I+ RL S LA
Sbjct: 289 HLVKTDDATTEIAACNTVIWKE--GKPVGYNTDYRASMASID-----RLFGGDEKQSGLA 341
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
GK +++GAGG KA+A G + +G VVIA+RT +++ LA+ + D + +
Sbjct: 342 GKTALLLGAGGVSKAIACGLRRRGCDVVIASRTLEKSEALAKKFKARTI---DWKLRHSV 398
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
++ N T +GM P +DE+PI + + FD VY P+ T ++ A E+GA ++G+
Sbjct: 399 QAHLVVNGTPLGMHPNLDESPIDEGYFSTDMVAFDTVYNPEQTLFIKRAREAGAKTITGI 458
Query: 501 EMFIGQAYEQYERFTGLPGKMN 522
+MF+GQA Q++ FT M+
Sbjct: 459 DMFVGQAALQFKLFTAHDPPMD 480
>gi|149175942|ref|ZP_01854559.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
gi|148845096|gb|EDL59442.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
Length = 498
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 273/498 (54%), Gaps = 28/498 (5%)
Query: 25 LICVPIMGESVDKMVVDMGKANAS-GADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
+ICV I G + KMV+ ++ A GA+LVE+RLD + ++ LIK+ P P + T
Sbjct: 1 MICVSI-GRTRHKMVMMEHRSLAEKGAELVELRLDWIART---PDVNRLIKDRPTPVVIT 56
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE--KCKVIV 141
R + G+++ E +R +LR A+ +Y+D+E D I G P K K I+
Sbjct: 57 CRRPEDKGRWNKTEEQRQALLRTAIVSEVEYVDIE--------DDIAGTIPRYGKTKRII 108
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S HN+ TP +DL + A + DIVK T A D R+ Q+ +++VP IG M
Sbjct: 109 SHHNFDETP--DDLEEIHAAMCKKDPDIVKLVTMANSPGDSVRMLQLVANAKVPTIGFCM 166
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
GE G+ISRILC K+G T+ T APGQ ++ +Y + ++GP+T V+G+IG
Sbjct: 167 GEYGVISRILCGKYGSPFTYATFSRERELAPGQLAFSEMSRIYRYDEIGPETPVYGVIGD 226
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
P+ HS SP+++N AFK + V++ + D + + + + + G+S TIPHK A+
Sbjct: 227 PIAHSLSPLIHNLAFKHDKLDAVYLPFRIPKDRLKETLKEFEWLNVQGYSVTIPHKAGAL 286
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLF-GYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
+ DE D +K +G N + + D K + NTDY A+ +I GL + +
Sbjct: 287 ELADEADEASKKMGVANTLFK--DDKKAWQARNTDYDAALDSIRLGLDPQ---GKATADP 341
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
+ GK +++GAGG +A+ G A G + I+NR+ R +LA+ +G + + EN
Sbjct: 342 INGKQVLLLGAGGVSRAIGAGIVAAGGVLTISNRSRTRGEQLAKDLGCNHCT---WENRG 398
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
IL N T++GM P V++TP ++ + LVFD VY P+ T LL++A E G VS
Sbjct: 399 SGRYDILVNGTAVGMYPNVNDTPFAQNFMQEEMLVFDTVYNPENTLLLKQARERGCKTVS 458
Query: 499 GLEMFIGQAYEQYERFTG 516
G+EMF+ QA QY+ FTG
Sbjct: 459 GIEMFVRQAAAQYKLFTG 476
>gi|320102191|ref|YP_004177782.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749473|gb|ADV61233.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 527
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 184/503 (36%), Positives = 270/503 (53%), Gaps = 38/503 (7%)
Query: 26 ICVPIMGESVDKMVVDMGKANA-SGADLVEIRLDGLKNFNPRE-NIKTLIKESPVPTLFT 83
ICV I+G ++ K A +GA LVE+RLD L+ R+ ++K ++ P + T
Sbjct: 4 ICV-ILGRGRHAALIQEWKDAADAGAQLVELRLDCLR----RDIDLKRILANRYSPCVVT 58
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
R +GG + DE R +LR A+ +G DY+D+E +A+E ++ K K I+S
Sbjct: 59 IRRGRDGGIWRQDEERRQRLLREAIVMGVDYVDIEADIAKEI------RRFGKVKRIISY 112
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HN++ TP ++L +++ ++ ADIVK AT A I D A V + + VP I + MGE
Sbjct: 113 HNFKETP--KELPDIIQKMATLDADIVKVATIATSIQDAAFVLKTASEAPVPTIAIAMGE 170
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G +RIL AK+G LT+ + APG P +DL Y F ++ T+V+G+IG PV
Sbjct: 171 VGFFTRILGAKYGAPLTYASFNPDRSFAPGLPNFRDLKRDYRFEKIDSATEVYGVIGDPV 230
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
S SP+++N F+ G N V+V V + + FF++ G S TIPHKEA +
Sbjct: 231 AQSLSPMVHNAIFEHYGQNKVYVPFKVAEGKLPTFFESLDFLKLKGLSVTIPHKEAIRQH 290
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
DE D + ++ G+ N + R DG G+NTDY I +ED L GR N + S L G
Sbjct: 291 LDEEDDIVETTGSCNTVEIR-PDGTRVGHNTDYPAVIETLEDALGGRPNPA---LSPLEG 346
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-------HALSLADL 434
K +++GAGG +++AY GA V I R ++++ LAE VG A +L+D
Sbjct: 347 KQALLVGAGGVARSIAYALTRHGAGVTIVARNDEKSKALAEEVGCKFVPWTMRASTLSD- 405
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
IL N T +GM P+V+ETP+P A LVFD VY P+ T L+ E
Sbjct: 406 ---------ILINATPVGMHPEVNETPLPPAAFRENILVFDTVYHPENTLFLKLGREHNC 456
Query: 495 TIVSGLEMFIGQAYEQYERFTGL 517
I +G+EMF+ QA Q F G+
Sbjct: 457 KIATGVEMFVRQAARQARFFAGV 479
>gi|384247564|gb|EIE21050.1| aldolase [Coccomyxa subellipsoidea C-169]
Length = 528
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 201/514 (39%), Positives = 285/514 (55%), Gaps = 28/514 (5%)
Query: 30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKN---FNPRENIKTLI---KESPVPTLFT 83
+ ++VD + ++G+A GADLVE+RLD L + +P ++ ++ + + +P L T
Sbjct: 4 VTADTVDGALAEIGEAAHLGADLVELRLDFLTDIDLLDPTPMLERMLGACETALLPALVT 63
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
+RP+WEGGQY G + R+ VL+ A GA YIDVE A F S G+ P VI+S
Sbjct: 64 FRPMWEGGQYSGPDLPRLAVLKAAAGAGAQYIDVEHLAAGSFFSS-EGEVPSSTAVIISH 122
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP----IIGL 199
HNY TPS E L LV + GADI K ATTA + D AR+ + + P +I L
Sbjct: 123 HNYSETPSDEALEALVEDMFDEGADIAKIATTAKCVEDSARMLALP--GKAPGGWLVIAL 180
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
MGE GL +R+L KFGG+L FG L SA GQ TI +L LY DTKVFGI+
Sbjct: 181 AMGEAGLPTRLLAPKFGGYLIFGALSAEESSATGQSTIAELRRLYRVHSQTEDTKVFGIV 240
Query: 260 GKPVGHSKSP----ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
P + P +L+N A + G + ++V L DD+ + F+GF T PH+
Sbjct: 241 DSPAAAVRGPPWSAVLHNAALAAAGMDTIYVPLCADDLRSCLDAFPC--FSGFCLTAPHQ 298
Query: 316 E-AAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
AA++C DE D A IGA + ++RQ+DG+L YNT++ A+SA+E L G +G
Sbjct: 299 VLAALECADEADRSAARIGAAD-TLQRQTDGRLQAYNTEWAAAVSALEAALGGAWCNAGS 357
Query: 375 VS---SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
SAL GK VV+GAGGAG+ALA+G KGARV++ +R + + G A+SL
Sbjct: 358 PQKGESALRGKCVVVVGAGGAGRALAFGVVEKGARVIVCDRQVTSSALQQQMAGILAISL 417
Query: 432 AD----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+++ + G + + M ++E+ + AL Y +V DA T TRLLR
Sbjct: 418 GSGASAVKHADVAAGRVAGDVLINSMPACMEESLVSAAALSCYRVVLDATCTSLQTRLLR 477
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPGKM 521
EA+E G VSGLE+ + QA +Q+E TG P +
Sbjct: 478 EAQELGCATVSGLEISVTQAAQQFELLTGAPAPV 511
>gi|430743501|ref|YP_007202630.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
gi|430015221|gb|AGA26935.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 264/479 (55%), Gaps = 26/479 (5%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
G +LVE+RLD L+ ++K ++ P P +FT R +GG + G E+ R +LR A+
Sbjct: 25 GVELVELRLDCLRR---EPDLKRILANRPTPLVFTIRRGVDGGIWRGSEDRRQQLLREAI 81
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
LG DY+D+E+ +A + ++ K K IVS HN + TP+ +L + + AD
Sbjct: 82 ALGVDYVDLEMDIAPKI------RRFGKTKRIVSYHNLKKTPA--ELIEIAEQCDEMDAD 133
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
+VK AT A + D RV + + VP + + MGE G +R+L AK+ T+ +
Sbjct: 134 VVKIATKAESLADALRVLSLGTRAVVPTVTIAMGELGFFTRVLGAKYKAPFTYAGINPER 193
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
APG PT + L + Y + + +T+V+ +IG P+ S SP ++N AF+ +G N V V L
Sbjct: 194 TFAPGMPTFQVLKNDYAYDMINAETEVYAVIGDPIEQSLSPAIHNAAFRHLGLNKVLVPL 253
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ + + + GFS TIPHKE VK D+ D + G+ N ++ ++ GK
Sbjct: 254 LIPAGTLEASLKELEVLNIQGFSVTIPHKEELVKLLDQKDGAVERTGSCNTLVFQK--GK 311
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
G+NTDY A+ +E G+ G + G +S L K +++GAGGA +++++G +GA
Sbjct: 312 KIGHNTDYRAAMDTLEAGMGG---LKEGGASPLMDKQVLILGAGGAARSISFGCSRRGAS 368
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
V I NR RA +LAE VG +S A + E I+ N T +GM P VD+TP+P
Sbjct: 369 VTITNRHDARATKLAEEVGCRTVSWAQRASTLAE---IVVNCTPVGMHPNVDDTPVPPAT 425
Query: 467 LGHYALV-FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP 524
++ FD +Y P+ T L+ A E ++G++MF+GQA EQ++ +TG M+AP
Sbjct: 426 FSTPGMIAFDTIYHPENTMFLKLARERECIPINGVDMFVGQAAEQFKLYTG----MDAP 480
>gi|449497737|ref|XP_004160503.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 213
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/195 (76%), Positives = 164/195 (84%), Gaps = 2/195 (1%)
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
VD +A GAVN ++RRQSDGKL GYNTD GAISAIEDGL G N S VSS LAGKL
Sbjct: 9 VDPLA--TGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGLLGLHNDSFAVSSRLAGKLV 66
Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
VVIGAGG GKA+AYGAK KGAR+VIANR++DRARELA+ VGG ++SLADLENF+PEDGMI
Sbjct: 67 VVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLADLENFHPEDGMI 126
Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI 504
L N T IGMQPKVDETPIPKHAL Y+LVFDAVYTP++TRLLREAEESGA IV GLEMF
Sbjct: 127 LVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEESGAAIVPGLEMFT 186
Query: 505 GQAYEQYERFTGLPG 519
QAYEQYE FTGLP
Sbjct: 187 RQAYEQYEGFTGLPA 201
>gi|255291825|dbj|BAH89264.1| putative 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
fragment [Diospyros kaki]
Length = 188
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 145/169 (85%)
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTK 254
P IGL MGERGLISRILCAKFGGFLTFG LE+GI SAPGQPT++DLLDLYNFRQ+GPDTK
Sbjct: 1 PTIGLAMGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIGPDTK 60
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
V G+IG P+GHSKSP LYN AFK FNG+++ LLVD++A F TYSS DF G+S TIPH
Sbjct: 61 VHGVIGNPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPH 120
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
K A ++CCDEVD +AK+IGA++C+I++ SDGKL GYN DY+GAI+AIE+
Sbjct: 121 KMAGLECCDEVDPIAKAIGAISCVIKKPSDGKLIGYNVDYLGAIAAIEE 169
>gi|383765626|ref|YP_005444607.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
gi|381385894|dbj|BAM02710.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
Length = 528
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 265/516 (51%), Gaps = 38/516 (7%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
TL+C PI D + G+A +GADLVE R D + + R+ + L+ ++ +P + T
Sbjct: 2 TLLCCPITVNDADDALAACGRAAEAGADLVEFRCD--RFTDDRDALARLVADASLPCIVT 59
Query: 84 YRPIWEGGQYDGDENERVDVLRLAME--LGADYIDVELQVAREFNDSIRGKKPE---KCK 138
R EGG + G E+ RV +L + Y+D E + R + +C
Sbjct: 60 LRHASEGGGFSGLESLRVGLLLFLSQQPRPPAYLDFEHARLAALSAGERADLEDAATRCG 119
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
+I+S+H++ P+ D ++A G ++K A A + D + F++ P
Sbjct: 120 LILSTHDFAGRPADLD-RRVLAMADTPGVRVLKAAWAARSLRDNLQAFELIERRLAPTAA 178
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
L MG+ GL SR+L KFGGF+TF + +APGQPTI +L DLY + +GP T+V+G+
Sbjct: 179 LCMGDAGLPSRVLARKFGGFVTFAAADRASGTAPGQPTIAELRDLYRWDAIGPATRVYGV 238
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-------YSSNDFAGFSCT 311
IG PVGHSKSP L+N F + GF+GV++ + + + + + S F G S T
Sbjct: 239 IGDPVGHSKSPALHNAGFDASGFDGVYLPMPIPAGYEHLKATLSAWLDHGSLRFRGASVT 298
Query: 312 IPHKEAAVKCCDE----VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
IPHK ++ +E +D +A IGA N +I + DG L NTD A+ + L
Sbjct: 299 IPHKADLLRFAEERGATIDPLAARIGAANTLIVGE-DGALAVRNTDCDAALGVVRRAL-- 355
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
GGV L G V+GAGG +A+ G G RV + NR+ +RAR LA G
Sbjct: 356 -----GGVG--LRGAAVAVLGAGGVSRAVVAGFADAGCRVTVFNRSVERARSLAAAFGVE 408
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQ----PKVDETPIPKH--ALGHYALVFDAVYTPK 481
A LA+ + + N TSIGM+ P D +P+P + G +VFD VYTP
Sbjct: 409 AAPLAEAAAGAAD---VWINATSIGMETAEDPAPDASPLPDPPGSWGPGTVVFDTVYTPP 465
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TRLLR+A +G G MF+ QA Q+E +TG+
Sbjct: 466 ETRLLRDAAAAGCVTAGGTAMFLAQAAAQFEAWTGV 501
>gi|87311736|ref|ZP_01093851.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
gi|87285520|gb|EAQ77439.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
Length = 495
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 268/497 (53%), Gaps = 29/497 (5%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV I ++ + G LVE+RLD + N +K L+ + P P L T
Sbjct: 1 MICVSIGRGRHKHIIAEHRHLVDLGVKLVELRLDYI---NGTIKLKRLLNDRPGPVLVTC 57
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG++ G E ER VLR A+ GADY+D+E +A + K I+S H
Sbjct: 58 RREQDGGRWAGMEAERQMVLRTAIVDGADYVDIEEDIAANI------PRYGTTKRIISYH 111
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
N++ TP+ D+ + R+ DIVK AT A D R+ ++ + VP I L MG+
Sbjct: 112 NFRETPA--DIEEIHERMCKLDPDIVKLATMANSPHDNIRMLKLAQRNNVPTIALCMGDM 169
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
G +RIL AK+G +T+ T N APGQ + + ++Y + Q+ +T+++G+I P+G
Sbjct: 170 GTPTRILGAKYGVPITYSTYSNERTLAPGQIGYQQMREVYGYDQINAETEIYGVIADPIG 229
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQT-YSSNDFAGFSCTIPHKEAAVKC 321
HS SP L+N F+ G N ++ V + +A F Q + + G S TIPHKE V+
Sbjct: 230 HSLSPQLHNACFRDQGSNRCYLPFRVPREHLASFIQEDCPALEIKGLSVTIPHKETIVRM 289
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
+ + + IGA N ++ +G G+N+D A++++ L V++
Sbjct: 290 IKKPNAAVQGIGAANTVLF--DEGGPSGFNSDCDAALASLSTAL------PQDVANPYEN 341
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD--LENFNP 439
K +V+G+GG KA+A+G K +G V+IA+RT + A +LA+ +G +S D LE +
Sbjct: 342 KTALVLGSGGVAKAIAWGLKNRGVDVIIASRTDENADDLAKGLGCRMVSWEDRGLERVD- 400
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
IL N T +GM P V+E+PI K L +VFD VY P+ T L++EA + +V+G
Sbjct: 401 ----ILINGTPVGMHPNVNESPIDKVRLRAGMVVFDTVYNPEQTLLIKEARQRECRVVTG 456
Query: 500 LEMFIGQAYEQYERFTG 516
++MF+ QA QY+ FTG
Sbjct: 457 VDMFVRQAALQYQLFTG 473
>gi|307109521|gb|EFN57759.1| hypothetical protein CHLNCDRAFT_143054 [Chlorella variabilis]
Length = 375
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 181/282 (64%), Gaps = 4/282 (1%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C ++ +V+ M+ + +A +GAD+VE+RLD L+ F P ++ L++ P+P + T
Sbjct: 21 THLCTSLVAPTVEGMLAEAQEAEQNGADIVELRLDYLQQFAPEADLSRLLQACPLPAIVT 80
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP-EKCKVIVS 142
YRP WEGG+YDG E +R+ LRLA GA Y+DVEL+VA F G +P VIVS
Sbjct: 81 YRPTWEGGKYDGPEPQRLAALRLAALSGAAYVDVELKVAPAF---FAGTQPWAGGAVIVS 137
Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
SH+Y+ T S E+L LV R +GADIVKFAT A DITD RV + VP I L MG
Sbjct: 138 SHDYERTASEEELMALVERCHGAGADIVKFATMANDITDAHRVLSVLRRCPVPCIALAMG 197
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
ERG ISR+L K+GGFLTFG L SAPGQPT++ L +Y +Q DT V GI+G P
Sbjct: 198 ERGQISRLLAPKYGGFLTFGALSPDRASAPGQPTLQQLSGMYGLKQQRRDTAVLGIVGNP 257
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
V HS+SP ++N A + G NGV+V LLVDD+ F T++ D
Sbjct: 258 VSHSRSPAIHNAALRQAGLNGVYVPLLVDDMPSFLATFTGED 299
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
DETP+P ALG Y LVFDAVYTP TRLLR+A +G +V+G MF+GQA +Q+ FTG+
Sbjct: 299 DETPVPATALGGYRLVFDAVYTPLHTRLLRDAATAGCAVVTGDTMFVGQAADQFRLFTGV 358
>gi|337292890|emb|CCB90890.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Waddlia chondrophila 2032/99]
Length = 456
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 257/493 (52%), Gaps = 66/493 (13%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
+CVPI ++ + + ++ A S A+++E+RLD L + +P E I L++ P + TYR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSP-EGINELVQACEKPVIATYR 60
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
+ V +L+ A++ GADY+DVE E N S+ E+C + S +
Sbjct: 61 -----------KKNPVPLLKAALDAGADYVDVE-----EINTSLPL---ERC---IYSIH 98
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITD-VARVFQITVHSQVPIIGLVMGER 204
Q TP +E+L ++ASGA I+K TA D +A + + + + +I MGE+
Sbjct: 99 LQETPPLEELYQ---SMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GL+SR +G F TFG + G SAPGQP L + +T + G+IG P+
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAPGQPLATHLRKW----KAQVNTTLCGVIGDPIT 211
Query: 265 HSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP ++ A+++ G N +F+ H +D+ K G + TIPHKE+ +
Sbjct: 212 HSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLKGLAVTIPHKESVIPML 271
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
DEVD A++IGAVN II GKL GYNTD GA+ ++ + L GK
Sbjct: 272 DEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQK------------RTDLRGK 317
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
++G GGA KA AYG + +G+ V + R ++ +E L + E
Sbjct: 318 RVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLKE----------QLMESE------- 360
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
IL TT +GM P D+T +P L LVFD VY P T+LL++AE++G +SGLEM
Sbjct: 361 -ILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISGLEM 419
Query: 503 FIGQAYEQYERFT 515
F+ QA EQY+ FT
Sbjct: 420 FMIQAREQYKFFT 432
>gi|297621526|ref|YP_003709663.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
gi|297376827|gb|ADI38657.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
Length = 456
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 257/493 (52%), Gaps = 66/493 (13%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
+CVPI ++ + + ++ A S A+++E+RLD L + +P E I L++ P + TYR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSP-EGINELVQACEKPVIATYR 60
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
+ V +L+ A++ GADY+DVE E N S+ E+C + S +
Sbjct: 61 -----------KKNPVPLLKAALDAGADYVDVE-----EINTSL---PLERC---IYSIH 98
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITD-VARVFQITVHSQVPIIGLVMGER 204
Q TP +E+L ++ASGA I+K TA D +A + + + + +I MGE+
Sbjct: 99 LQETPPLEELYQ---SMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
GL+SR +G F TFG + G SAPGQP L + +T + G+IG P+
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAPGQPLATHLRKW----KAQVNTTLCGVIGDPIT 211
Query: 265 HSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
HS SP ++ A+++ G N +F+ H +D+ K G + T+PHKE+ +
Sbjct: 212 HSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLRGLAVTVPHKESVIPML 271
Query: 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
DEVD A++IGAVN II GKL GYNTD GA+ ++ + L GK
Sbjct: 272 DEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQK------------RTDLRGK 317
Query: 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
++G GGA KA AYG + +G+ V + R ++ +E L + E
Sbjct: 318 RVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLKE----------QLMESE------- 360
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
IL TT +GM P D+T +P L LVFD VY P T+LL++AE++G +SGLEM
Sbjct: 361 -ILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISGLEM 419
Query: 503 FIGQAYEQYERFT 515
F+ QA EQY+ FT
Sbjct: 420 FMIQAREQYKFFT 432
>gi|390986545|gb|AFM35792.1| hypothetical protein, partial [Oryza eichingeri]
Length = 156
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/157 (74%), Positives = 135/157 (85%), Gaps = 1/157 (0%)
Query: 210 ILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSP 269
+LC KFGGFLTFG+LE G SAP QPT DL+++YN RQ+GPDTKV+GIIGKPVGHSKSP
Sbjct: 1 VLCPKFGGFLTFGSLEKGKESAPAQPTATDLINVYNIRQIGPDTKVYGIIGKPVGHSKSP 60
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
IL+NEAF+SVG N V+V LVDD++ F TYSS +FAGFSCTIPHKEAAV+CCDEVD +A
Sbjct: 61 ILHNEAFRSVGLNAVYVPFLVDDLSNFLNTYSSTEFAGFSCTIPHKEAAVRCCDEVDPIA 120
Query: 330 KSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
K IGAVN IIR+ +GKL GYNTDYVGAISAIEDG+R
Sbjct: 121 KDIGAVNTIIRK-PNGKLVGYNTDYVGAISAIEDGIR 156
>gi|242085730|ref|XP_002443290.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
gi|241943983|gb|EES17128.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
Length = 164
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
M E+G ISRILCAK+GG+LTF +LE G SAPGQPT+ DL++ Y RQ+GPDTKVFGIIG
Sbjct: 1 MKEQGFISRILCAKYGGYLTFASLEKGKESAPGQPTVSDLINKYKIRQIGPDTKVFGIIG 60
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
PV HSKSPI+ N+AF+SVGF+ VF+ L DD+ +F T+S+ D+AGFSCT+PHKE A++
Sbjct: 61 NPVNHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVEFLSTFSAPDYAGFSCTMPHKETALR 120
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
CCD+VD +A+ IGA+N IIRR DGKL GYNTDY GAISAIEDGL
Sbjct: 121 CCDDVDPIARDIGAINTIIRR-PDGKLVGYNTDYSGAISAIEDGL 164
>gi|94971136|ref|YP_593184.1| 3-dehydroquinate dehydratase [Candidatus Koribacter versatilis
Ellin345]
gi|94553186|gb|ABF43110.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase [Candidatus
Koribacter versatilis Ellin345]
Length = 613
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 255/508 (50%), Gaps = 32/508 (6%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGA----DLVEIRLDGLKN-FNPRENIKTLI 73
+R +CV ++G + ++M+ A A G +E RLD L N +K L+
Sbjct: 12 LRSRIPRVCVAVIGATPEEMI-----AKAEGIIRENPFLEFRLDYLTNPAAALPKVKRLL 66
Query: 74 KESPVPTLF-TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGK 132
+ P + T R GG++ G + ++++L A G +DVEL+ A S K
Sbjct: 67 ETRPDAVIIGTCRRAVNGGKFKGSASAQLEILAKAAAAGCQLLDVELETAESVKASELQK 126
Query: 133 KPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS 192
E +I+S H+++ T ++D+ + +I +V AT+ D + + + H
Sbjct: 127 LREAASIILSFHDFKATKKLDDILARMVKIHVEYYKVVSTATSLYDNVQMMKFLEKHGHD 186
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
+IGL MGE+G+ISR+L + G TF G +APGQ T +DL + +
Sbjct: 187 YW-LIGLCMGEQGIISRVLSVRAGSVFTFAAASAGEETAPGQVTYRDLRSTFRIDHVDAA 245
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T V+G+ G PV HS SP + N AF+ NGV++ L G S T+
Sbjct: 246 THVYGVAGDPVAHSLSPAMMNLAFRRENVNGVYLALHTKKTDDLMACIRDIPLRGLSITM 305
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE VK D + + IGAVN I+R Q DGKL+G+NTD G + + D R+ V+
Sbjct: 306 PHKEEMVKHLANTDDLVRKIGAVNTIVRAQ-DGKLYGFNTDVAGIVGPLSD----RITVT 360
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
G +V+GAGGA +A +G A+GA + I NRT +A++LA+ G + A
Sbjct: 361 GA--------KILVVGAGGAARAAVFGLAARGAHISIVNRTVPKAQKLAKEAGAKVVKRA 412
Query: 433 DLENFNPEDGMILANTTSIG-MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
DL+ D ++ N TS+G M PKV +P+ L +VFD VY P TRL++ A+
Sbjct: 413 DLKKL---DFDVIINATSVGMMNPKV--SPLEADEL-RARIVFDMVYNPVNTRLIQLAKA 466
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPG 519
G + G EMF+ Q Q+E ++G P
Sbjct: 467 KGLATIPGYEMFVQQGARQFEIWSGKPA 494
>gi|168699805|ref|ZP_02732082.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Gemmata obscuriglobus UQM 2246]
Length = 520
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 262/497 (52%), Gaps = 33/497 (6%)
Query: 30 IMGESVDKMVV-DMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIW 88
++G + KMVV ++ +A GA +E+RLD L + K L P + T R
Sbjct: 9 VIGRTRHKMVVAELQEAVKRGAKFIELRLDFLAKA---VDFKRLTPLKQCPWVATLRRPA 65
Query: 89 EGGQYDGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPE--KCKVIVSSHN 145
+GG++ G+E ER+ ++R A+ GA +++D+E +A G P K K IVS HN
Sbjct: 66 DGGRFSGNEQERMMIIRQAIASGAFEWVDLETDIA--------GAVPRYGKVKRIVSYHN 117
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERG 205
TP+ +L ++ A + AD+ K A A DVA+V + + P + MG+ G
Sbjct: 118 TAETPA--NLDDIFADMLKQDADVYKIAVAAQSPADVAKVLHLQRTAPKPTVAFCMGDIG 175
Query: 206 LISRILCAKFGGFLTFGTL--ENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+R L KFG + E GI APG P+ + Y +++ DT++FG++G PV
Sbjct: 176 QPTRFLALKFGAPWIYAAFNKERGI--APGLPSFDEFRTTYPVQEITADTQIFGVLGDPV 233
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
GHS SP+L+N ++ +G N +++ V +++ + Y G+S TIPHKEAA
Sbjct: 234 GHSLSPLLHNHMYRKLGVNALYLPFQVPRGQLSQALEVYGQIPVRGYSVTIPHKEAAAAL 293
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL--NVSGGVSSAL 379
+ + G+ N ++RR DG NTD + AI D L+ L G L
Sbjct: 294 AKQAEPTVPFTGSANTLVRR-DDGAFAAANTD----LGAILDSLKAHLAQKSKDGPFVQL 348
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
+ +++GAGGA ++ AYG +GA++ I+ RTYDRA++LAE V A+ N N
Sbjct: 349 SQLSVLILGAGGAARSAAYGMHREGAQITISARTYDRAQKLAEDVKCKAVDWHARHNVNF 408
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
+ +L N T +GM P VDE+P L A+VFD +Y P+ T L+REA G ++G
Sbjct: 409 D---VLINCTPVGMHPNVDESPCHFSVLKPGAIVFDTIYRPETTLLIREARARGCDTITG 465
Query: 500 LEMFIGQAYEQYERFTG 516
++MF+ QA Q E FTG
Sbjct: 466 VDMFVRQAARQIELFTG 482
>gi|338733093|ref|YP_004671566.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Simkania negevensis Z]
gi|336482476|emb|CCB89075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Simkania negevensis Z]
Length = 493
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 259/499 (51%), Gaps = 31/499 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
++ + I G S D + +AN G + +E+RLD LK+ +K+L K +P +FT
Sbjct: 1 MLVIAIQG-SFDAAKKAIEEANNKG-EAIELRLDLLKDLEHVSKLKSLCK---LPVIFTL 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R +GG++ G E ER L + L DY+D+E V F + P+ +I S H
Sbjct: 56 RKKAQGGEFQGSEQEREAKLLELLTLKPDYVDLEFDVDPSFAKKVHQSFPD-VAIICSYH 114
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ---VPIIGLVM 201
++ TP ++L N++ ++ A I K AT A D R+ + + + + G+ M
Sbjct: 115 DFDKTP--DNLENVLTQMTQMRASIYKIATFANSSLDSLRMLSFILQKRREGISLAGMSM 172
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
G G I+RIL LT+ +L + +APGQ + L +Y F + TKV+ +IG
Sbjct: 173 GPHGDITRILAPIVDSLLTYTSLSSEEKTAPGQVPVDTLEKIYRFSTLNQQTKVYALIGD 232
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
PV S +N FK + N V+V +LV +++ FFQ + F GFS T+P KE
Sbjct: 233 PVEQSIGHFAHNTLFKKLKENAVYVKILVRSEEVGPFFQLLKTLPFHGFSVTMPLKEKVG 292
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
+ D ++ AK IGA+N + ++G+ G+NTD GA+ AIE+ +
Sbjct: 293 EHLDHINPQAKKIGAINTL--NLNEGRWEGFNTDASGALDAIEE------------KRQV 338
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AGK V++GAGGA +ALAY +G V+I NRT ++A++LA +G ++ LE +
Sbjct: 339 AGKKVVILGAGGAARALAYETIERGGEVLIVNRTEEKAKKLARQLGCEGVA---LERWTK 395
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
IL NTT +GM K + I + AL A+VFDA+ PK T LL A+ G IV G
Sbjct: 396 PSYDILMNTTPVGMTTK-GLSLISEKALLKNAVVFDAIMYPKETPLLILAKNKGCQIVYG 454
Query: 500 LEMFIGQAYEQYERFTGLP 518
EMF QA +Q E + P
Sbjct: 455 NEMFTRQAVKQAEIWLNRP 473
>gi|302339344|ref|YP_003804550.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301636529|gb|ADK81956.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
Length = 492
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 246/491 (50%), Gaps = 36/491 (7%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKES--PVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
+ EIR D L P E K LI S +P + T R +GG + E ER+D+LR A
Sbjct: 26 ECAEIRFDHLV---PEEREKALILPSCSDLPLIATARLPKDGGVWKEGEEERIDLLRKAA 82
Query: 109 ELGADYIDVEL----QVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
E G ++D+E + R F + + G ++I S H++ L ++V +
Sbjct: 83 ESGFAFVDLEADQPRSLLRSFVELLSGYG---GRLIASFHDFTSFTDERTLFSMVEEAEG 139
Query: 165 SGADIVKFATT---ALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTF 221
GA I K A ++ + R I + MG G+ RI FG LTF
Sbjct: 140 LGA-IPKAAVMIDGSVSLLAFTRAALKLKERPAERILVAMGSFGVPVRIAYRHFGSMLTF 198
Query: 222 GTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGF 281
I +APGQ + + L Y ++ +++FGIIG PV H++SP ++N AF+S+GF
Sbjct: 199 CAPAEKI-AAPGQLSAEALAFPYALSRISDKSRLFGIIGNPVLHTRSPEIHNSAFRSIGF 257
Query: 282 NGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR 341
+G+++ DD F + + GFS T+P KE + EVD ++IG+ N + RR
Sbjct: 258 DGLYLPFPTDDTVAFMEIARLLEIGGFSVTVPFKEEIIGRLHEVDENVRAIGSCNTVFRR 317
Query: 342 QSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAK 401
+ G NTDY G ++ L+ RL GG + ++IG+GGA +++A +
Sbjct: 318 GHE--FHGTNTDYDGFLAP----LKIRLGKRGGRA--------LMIGSGGAARSVAVALR 363
Query: 402 AKGARVVIANRTYDRARELAETV---GGHALSLADLENFNPEDGMILANTTSIGMQPKVD 458
+ VV+ANRT+ RA+ L+E + GH S + + P ++ TTS+GM P +D
Sbjct: 364 SLFDSVVVANRTHSRAQRLSEALLGEKGHVCSPEEAGSLGPY--RVIVQTTSVGMSPHID 421
Query: 459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ P+P + LV+D +Y P+ T L+ AE SG I+ G EM +GQA Q+E FTGL
Sbjct: 422 DDPLPSYCFTGDELVYDIIYIPEKTHFLQRAEASGCDIIGGKEMLLGQAERQFELFTGLR 481
Query: 519 GKMNAPHLYKF 529
+ H F
Sbjct: 482 YPKDPEHRENF 492
>gi|116626199|ref|YP_828355.1| shikimate dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229361|gb|ABJ88070.1| shikimate dehydrogenase / 3-dehydroquinate dehydratase [Candidatus
Solibacter usitatus Ellin6076]
Length = 509
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/503 (32%), Positives = 254/503 (50%), Gaps = 42/503 (8%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN-FNPRENIKTLIKESPVPTLF-T 83
IC+ + V ++ + +G +E RLD L N E I ++E P L T
Sbjct: 10 ICIALGLPDVPTLLDHARREAEAGEVFLEFRLDYLSNPCKGAEAIGKFLEEFPECILLAT 69
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVI 140
R G+++G E++ VL LA+ GA IDVE++ A D + RG+ +VI
Sbjct: 70 CRRHQNHGKFNGSIEEQLAVLDLAVRNGAHAIDVEIETAEIAQDRLNQFRGR----TQVI 125
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-VHSQVPIIGL 199
VS HN++ TP ++ + N V ++QA D K +TA +D RV + ++ +I L
Sbjct: 126 VSYHNFEATPPMDTVVNRVMKVQA---DAYKIVSTARKPSDNVRVLAVAKALTKHRVIVL 182
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGII 259
MGE G +R+L FGG T+ +A GQ + + L LY ++G K++G+I
Sbjct: 183 AMGELGFPTRVLSPVFGGVFTYAAPIYAEGTAAGQVSARYLRHLYRVEKLGKSAKIYGVI 242
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEA 317
P+ HS SP ++N AF+S + V++ LV + FF + +GFS TIPHK+
Sbjct: 243 ADPIRHSISPAVHNRAFQSRRVDAVYLPFLVAPACLRDFFSLAAKLPLSGFSVTIPHKQK 302
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
++ D VD +A+ IGAVN + R+ GK G NTD G + L+
Sbjct: 303 IIRYLDIVDPLARRIGAVNTVWRKA--GKWRGTNTDAAGVTGPLSRLLK----------- 349
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
++ +++G GGA ++ A GA++ + R DR R L++ G +L L++
Sbjct: 350 -ISKASVLIVGNGGAARSAACALSDAGAKISLVGRNPDRVRALSKICGAESLLREQLDSR 408
Query: 438 NPEDGMILANTTSIGMQPKVDET----PIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
+ D ++ + T +GM P V+E IP +VFD VY P T L++ A+E G
Sbjct: 409 H-FDAVV--HATPLGMFPHVNECFFEDKIPAD------IVFDMVYNPLETVLVQRAKEQG 459
Query: 494 ATIVSGLEMFIGQAYEQYERFTG 516
+V GL+MFI QA Q+E +TG
Sbjct: 460 KIVVPGLDMFIEQAVRQFEIWTG 482
>gi|374315064|ref|YP_005061492.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350708|gb|AEV28482.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
Length = 497
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 258/515 (50%), Gaps = 52/515 (10%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV--PTLF 82
++C+ + G ++++ + K N L E+RLD L NP E + + + V P +
Sbjct: 1 MLCLTLTGSTLEEDRALVVK-NRKWISLAELRLDYL---NPEEQEEAAVFPNMVDIPVIL 56
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR--------------EFNDS 128
T R + +GG+ E +R+ +L + Y+D+E + + + S
Sbjct: 57 TLRRVSDGGRCTLGEKQRLQLLYNTAKGDFAYVDIEEDIKKCDLKFKESGTEIKVDLESS 116
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
+R + K+I S H+++ P+ D+ ++++ A G DI K A T + DV +F++
Sbjct: 117 LRMRN---IKIIRSYHDFEKVPA--DIYGHISKLAAKG-DIPKIAVTPKSMIDVISLFRV 170
Query: 189 TVHSQ----VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
Q IIG MG+ G+ +RIL K G LTF T + V APGQ + + + +LY
Sbjct: 171 QQELQGIKDKIIIG--MGDFGIPTRILYKKCGSMLTFCTDSSEKVPAPGQLSAQTMSELY 228
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
++ T ++GIIG PV H+ SP+++N F ++ +N V+V LVD + FF+
Sbjct: 229 RSDKLDDRTHIYGIIGNPVYHTSSPLIHNPGFLAIHYNAVYVPFLVDSVRAFFKLAEMLQ 288
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
GFS T+PHK + K IGA N + R Q+ K G NTDY G ++ I +
Sbjct: 289 IHGFSVTVPHKRDVQPYLGRITREVKQIGACNTVTRIQNMWK--GTNTDYYGFLAPIAEE 346
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA-ET 423
+ G + SAL VIGAGGA +A+ + G +V + NR+ D A+ +A ET
Sbjct: 347 VS-----KGTIHSAL------VIGAGGASRAVIWALHNHGVKVTVINRSLDHAKSIASET 395
Query: 424 VGGHALSLADLENFNPEDGMI--LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
+ S LEN + G + + TTS+GM P E P+P LV++ +Y P+
Sbjct: 396 MS----SYDSLENCSRYSGKVDLVVQTTSVGMTPNDTEDPVPALRFLGNELVYELIYHPR 451
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T L+ A +G T+V G +M + Q Q+E FTG
Sbjct: 452 ETVFLKRAIAAGCTVVQGRDMLMEQGKLQFEAFTG 486
>gi|386346035|ref|YP_006044284.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
gi|339411002|gb|AEJ60567.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
Length = 491
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 245/499 (49%), Gaps = 31/499 (6%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
+C+ + G + ++ + + DLVE+R D + + E + +P + T R
Sbjct: 5 VCLSLTGRTKEEAEEQLARWREK-VDLVEVRADCMDE-SAWEGLGEWASGLGLPAILTLR 62
Query: 86 PIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
+GG ++G E+ + L L + G Y+DVE A D +R + VI S H
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELVRQGGWAYVDVEAWAADWLVDEVRRRG---MHVIRSRH 119
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITD-----VARVFQITVHSQVP--II 197
P EDL + + ++ +G +V A L T+ V +IT P I
Sbjct: 120 VMDGVP--EDLEHWM--VETAGQGLVPKAACMLGGTEDLLRLVRLHRRITAEGLPPGSYI 175
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
L MG G+ SRIL +G LTF + + G +APG + DLY R++ T +FG
Sbjct: 176 LLGMGPYGVPSRILSLAWGSLLTFSS-DPGRTAAPGHLDPGVMADLYRVRELSESTVLFG 234
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
+IG PV HS+SP L+N ++ G + V++ + VDD+ F G S TIPHKE
Sbjct: 235 VIGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDDLTSFMDLADELSLQGLSVTIPHKEG 294
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
+ D V +++G+ N ++RR DG FG +TD G + + R ++ G
Sbjct: 295 VIPFLTVRDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPL------REEIARGGDP 346
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHALSLADLE 435
+ K VV+GAGGA +A+ YG +G RV++ NRT +RAR LAE G ALS E
Sbjct: 347 VM--KAAVVLGAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAEEFGVDWGALSPESAE 404
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
G+I+ TTS+GM+ K +P+P + + +D VYTP+IT L A +G
Sbjct: 405 RMREFRGLIV-QTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAGCR 463
Query: 496 IVSGLEMFIGQAYEQYERF 514
I++G M QA EQ F
Sbjct: 464 IITGDRMLEAQAEEQMRLF 482
>gi|325971052|ref|YP_004247243.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
gi|324026290|gb|ADY13049.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
Length = 494
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 257/511 (50%), Gaps = 47/511 (9%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN--IKTLIKESPVPTLF 82
++C+ + G ++++ + + N L E+RLD L +P E + VP +
Sbjct: 1 MLCLTLTGSTLEENRA-LVERNRKWISLAELRLDYL---HPDEQKIASSFPSTVDVPVIL 56
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR---EFNDSI--------RG 131
T R +GG E +R+ +L A + Y+D+E V + +F D + +
Sbjct: 57 TLRRSSDGGSCTLSEKQRLQLLYEAAKGDFAYVDIEDDVKKTDLKFKDPLFEQKVDLEQS 116
Query: 132 KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH 191
K K+I S HN++ P+ D+ ++++ A G DI K A T + DV +F++
Sbjct: 117 LKQRHIKIIRSYHNFECVPA--DIFGRISKLAAKG-DIPKVAVTPKSMMDVITLFRVEQE 173
Query: 192 ----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247
+ +IG MGE G+ +RIL K G FL+F + +APG + + + LY
Sbjct: 174 LANLKEKIVIG--MGEYGICTRILYKKCGSFLSFCSDSQ---AAPGHLSAQTMSTLYRAD 228
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
++ T +FGIIG PV H+ SP ++N F+++ +N V+V LVD + FF+ G
Sbjct: 229 KLDEKTHIFGIIGNPVYHTASPKIHNPGFEAIRYNAVYVPFLVDSVRAFFKLAEMLQIHG 288
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
FS T+PHK + + K IG+ N ++R Q+ K G NTDY G ++ I + L G
Sbjct: 289 FSVTVPHKRSVQPYLGRITREVKQIGSCNTVVRIQNMWK--GTNTDYYGFLAPISEQL-G 345
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA-ETVGG 426
+ G + +AL V+GAGGA +A+ + G +V I NR+ + AR LA ET+
Sbjct: 346 K----GEIKNAL------VVGAGGAARAVVWALHNHGVKVTILNRSMEHARTLASETMST 395
Query: 427 -HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L A L N N E ++ TTS+GM +E IP + ++ VY PK T
Sbjct: 396 FDTLENAHLYNGNCE---LVVQTTSVGMGNLGNEECIPSFNFTGKEIAYELVYNPKETLF 452
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L+ A E+G TI+ G +M + Q Q+E FTG
Sbjct: 453 LKRAMEAGCTIIGGSQMLMEQGKLQFEAFTG 483
>gi|225873819|ref|YP_002755278.1| 3-dehydroquinate dehydratase [Acidobacterium capsulatum ATCC 51196]
gi|225794474|gb|ACO34564.1| 3-dehydroquinate dehydratase, type I domain/shikimate
5-dehydrogenase domain protein [Acidobacterium
capsulatum ATCC 51196]
Length = 800
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 249/508 (49%), Gaps = 30/508 (5%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKT----LIK 74
+R + +CV I S D+++ + + A +E RLD L N P I L +
Sbjct: 70 LRSRISRVCVAIAASSPDELI-EKAREAARENPFLEFRLDYLPN--PAAAISRIQQFLYE 126
Query: 75 ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGK-K 133
V + T R GG++ G + +L A+ G D ID+E++ A + + + +
Sbjct: 127 LGEVTAIATCRREPNGGKFKGSIEAEIQILEKAIAAGCDLIDIEIETAEKLKAAELARIR 186
Query: 134 PEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 193
+I+S H+++ T DL + +IQ D VK +TA + D + S
Sbjct: 187 SLGAALIISYHDFKAT---RDLDRMFEKIQRYSPDFVKMVSTATCLADNLAMMHFLERSS 243
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP 251
++G+ MGE+GLISR+L + G TF + + G + PGQ + L +++ Q+ P
Sbjct: 244 DAANVVGICMGEQGLISRVLGVRAGSVFTFASAQAGEETGPGQIAARTLHEIFRIDQVSP 303
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCT 311
T+V+G++G PV HS SP+++N AF+ N VF+ L + ++ + G + T
Sbjct: 304 ATRVYGVVGNPVMHSLSPLIHNLAFRRETVNAVFLPLQANTLSDVLRLVKEVPLHGLAVT 363
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+P K +K D +++ IGA N ++ R DG L+G+NTD + +E L
Sbjct: 364 MPFKGEILKHLTNTDALSEKIGACNTVV-RALDGNLYGFNTDVAAVVRPLERRL------ 416
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
L +VIGAGGA +A +G K KGA V I NRT + A++LA +
Sbjct: 417 ------PLRDARVLVIGAGGAARAAVFGLKDKGADVTIVNRTPETAQKLARQAKARTIRY 470
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
L + + ++ N T IGM ++ + L + LVFD VY P T LLR A E
Sbjct: 471 EQLAKASFD---VILNATPIGMHGHKQQSWLKPDQL-NARLVFDMVYNPIETPLLRMARE 526
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPG 519
G +++G+EMF+ Q Q+E +TG P
Sbjct: 527 KGLPVITGVEMFVQQGARQFEIWTGKPA 554
>gi|320106134|ref|YP_004181724.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924655|gb|ADV81730.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 706
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 244/501 (48%), Gaps = 30/501 (5%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLF 82
+CVPI ++ +M+ D +E+RLD L+ P+ +K + + P+ T+
Sbjct: 21 VCVPIAAKNAGEML-DRAAEVGRETPFLELRLDSLEK--PQLVTGRLKQFLSDRPLITMI 77
Query: 83 -TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGK-KPEKCKVI 140
T R GG + G E+++ L + + G +D+E++ A + K + C V+
Sbjct: 78 ATCRRKANGGDFAGSAEEQMEHLLASAKSGCQIVDMEVETAEALKATALDKLRDAGCVVM 137
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI-TVHSQ-VPIIG 198
+S H+++ TP DL + R+ D K TA + D +V + H++ ++
Sbjct: 138 LSFHDFKGTP---DLDAVYDRMAKFSPDFYKIVPTAKSLPDNLKVTALLEKHAEDANVVA 194
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
L MG G+++RIL +FG TFG G +APGQ + L +LY + T+++G+
Sbjct: 195 LAMGNFGVLTRILGPRFGSVFTFGAATVGEETAPGQVAARTLTELYRMDGIEASTRIYGV 254
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
G PV S SP++ N AF+ N V+V L D+ + G S T+P K
Sbjct: 255 AGSPVTSSLSPLMINTAFRRETVNAVYVALETGDVKDLLKVMEKLPIHGVSVTMPLKTDI 314
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
+ ++ D ++ IGA N ++R Q DGKL+G+NTD G + +E +
Sbjct: 315 LAHLEKTDPLSAKIGACNTVVRAQ-DGKLYGFNTDVGGIVGPLERRV------------P 361
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
L G +V+GAGG +A +G K KGA V I NRT ++A++LA G + L
Sbjct: 362 LRGAKVLVLGAGGVARAAVFGLKDKGAEVSILNRTPEKAQKLARQAGAKVMRRDQLAKTR 421
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
+ ++ N T GM + PI L + L+FD VY P T L+R A +V
Sbjct: 422 FD---VVINATPYGMLGQKIAAPISAEEL-NTGLLFDLVYNPIETPLVRLARSKNIAVVL 477
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
G+EMF+ Q Q+E +TG P
Sbjct: 478 GVEMFVQQGARQFEIWTGKPA 498
>gi|374313118|ref|YP_005059548.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358755128|gb|AEU38518.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 592
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 257/521 (49%), Gaps = 32/521 (6%)
Query: 8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGL-KNFNPR 66
+ + +++ S +R ICV + G + D+++ + +E RLD L K
Sbjct: 1 MTTANQIASHLLRSRIGKICVAVTGATPDELI-EKATNVLKETTFLEFRLDYLPKPMAAL 59
Query: 67 ENIKTLIKESPVPTLF-TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREF 125
+K + E+ T+ T R GG+++G +DVL A E G +D+EL+ +
Sbjct: 60 PLLKEFLAENGAATVIATCRCKENGGRFEGSNTGALDVLLKAAESGFQLVDIELEAIEKL 119
Query: 126 NDSIRGKKPEK-CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
+ + E VI+S H++ T +DL + RI+ D +K TA ++D
Sbjct: 120 PKTTMDRLREAGAAVIISHHDFHGT---KDLDAVYNRIEPFAPDFIKVVPTAKSLSDNLT 176
Query: 185 VFQ----ITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
+ + + S+ I+G+ MGE G+ISR+L + G TF G +APGQ + L
Sbjct: 177 LMRFLERMEDRSKSSIVGICMGEAGIISRVLGLRAGSAFTFAAANAGEETAPGQIAARTL 236
Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
++ Y Q+ TKV+G+ G P+ S SP++ N AF+ N V++ L + F+
Sbjct: 237 IEDYRIDQVDAATKVYGVAGNPIRSSLSPLMMNTAFRRETVNAVYLALQATKVDDLFKLV 296
Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
G S T+P KEA + + D ++ IGAVN ++R Q DGK +G+NTD G +
Sbjct: 297 REIPIQGLSVTMPLKEAIMPLLERTDPLSAKIGAVNTVLRAQ-DGKFYGFNTDVAGIVGP 355
Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
+E L +L G +V+GAGGA +A +G + KGA V I NRT + A++L
Sbjct: 356 LERRL------------SLKGAKVLVLGAGGAARAAVFGCRDKGAEVWILNRTPETAQKL 403
Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVY 478
A G + + + ++ N T +GM + P+ P+ + +VFD VY
Sbjct: 404 ARQAGAKTIKRDAVAKMGFD---VIINATPVGMTGQ-KAAPLLQPEDLVAR--IVFDLVY 457
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
P T LLR A + G T +SG+EMF+ Q Q+E +TG P
Sbjct: 458 NPIETPLLRLARQKGLTAISGVEMFVQQGARQFEIWTGKPA 498
>gi|322436187|ref|YP_004218399.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321163914|gb|ADW69619.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
Length = 571
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 218/442 (49%), Gaps = 35/442 (7%)
Query: 90 GGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN----DSIRGKKPEKCKVIVSSHN 145
GG+Y G +++L A G +D+EL+ A D IR +IVS H+
Sbjct: 81 GGRYKGSAASELEILVEAANSGFQIVDLELESAEALKSAGIDKIRATS---AGLIVSWHD 137
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQVPIIGLVMGE 203
++ TP DL + ARI D VK TA +TD ++ + + + I+G+ MG+
Sbjct: 138 FEKTP---DLDKVYARIAPFEPDFVKIVPTAQCLTDNVKLMRFIERMSDEASIVGVCMGD 194
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G+ISR+L + G TF G +APGQ + LL+ Y ++ TKV+G+ G PV
Sbjct: 195 SGIISRVLGVRAGSTFTFAAATVGEETAPGQILARTLLETYRIAEVDAATKVYGVAGDPV 254
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP++ N AF+ N V++ L D+ + G S T+PHK++ +
Sbjct: 255 NKSLSPLMMNTAFRRETVNAVYLALQATDVTDLVKLIQEIPIQGVSITMPHKQSIMAHLA 314
Query: 324 EVDTVAKSIGAVNCIIRRQSD----GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
D ++ IGA N ++R KL+G+NTD G I L+ R+ + G +
Sbjct: 315 HTDPLSAKIGACNTVLRVPPSAGEPAKLYGFNTDVQG----ILIPLQKRIELKGAKA--- 367
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL--ENF 437
+V+GAGG+ +A + + KGA V I NRT + A +LA+ G + L F
Sbjct: 368 -----LVLGAGGSARAAVFALRDKGAEVFILNRTLETAAKLAKQSGAKVIKREALLKSTF 422
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
+ ++ N T +GM + E + L LVFD VY P T LL++A G +++
Sbjct: 423 D-----VIINATPVGMSGQSVEPILTAAELKTTKLVFDLVYNPVDTPLLKQARSLGLSVI 477
Query: 498 SGLEMFIGQAYEQYERFTGLPG 519
+G+EMF+ Q Q+E +TG P
Sbjct: 478 TGVEMFVQQGARQFEIWTGKPA 499
>gi|347755767|ref|YP_004863331.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588285|gb|AEP12815.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
Length = 514
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 240/511 (46%), Gaps = 39/511 (7%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTL---IKESPVPTL 81
+IC PI + D ++ A+ AD +E+RLD L N + ++ L + P P +
Sbjct: 1 MICTPIAASTPDDLLA-ALPVAAAAADWLELRLDALHNLSVEAVLRALHHVLPRRPRPVV 59
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
T+RP +GG D +R+ A+ A+ D+E + + + P +V+V
Sbjct: 60 VTFRPREQGGFRDLSHADRLRFWHSALTTPAEAFDLETDLIAQLLPTYPPDHPVWARVVV 119
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI------TVHSQVP 195
S H++Q TP+ D+ A VK A DV R+F S
Sbjct: 120 SHHDFQATPA--DIHAFALAHFPPHAGTVKLAVKVNQPDDVCRLFDWLTGTPSATPSTWQ 177
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
I + MG G+++RIL +G T+ T +G APGQ T +L + + + T V
Sbjct: 178 KIPVGMGGLGVLTRILGPAYGARWTYSTGHDGRAVAPGQLTATELRETFRLSSLDRHTIV 237
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSN-------DFA 306
G++G PV HS S L+N AF +G N V++ + V DD+A F +
Sbjct: 238 AGLLGCPVAHSLSKDLHNAAFAHLGLNWVYIPVEVSPDDLAPFLRDAIHPRTRRLPWTVG 297
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G+S T+PHK A + D + A +GAVN I+ S +L G NTD GA+ ++
Sbjct: 298 GYSVTLPHKVAILPYLDRLTATAARVGAVNTIL--VSGQELIGDNTDVAGAMRPLQQRF- 354
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
A+ G+ V+GAGGA +A+ G A GA+V + R RA++L
Sbjct: 355 -----------AVEGEPVAVLGAGGAAQAVVCGLVAAGAQVTVFARHPARAQDLGARFD- 402
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYTPKITRL 485
+ + L++F+ + L NTT +GM + P+P L A V+D +Y P+ T L
Sbjct: 403 --VPIVPLDDFHGRRFVGLVNTTPVGMAGYAEGACPVPPERLEGLAWVYDLIYRPRHTAL 460
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L+ A + G + GL M I QA EQ R+TG
Sbjct: 461 LQAASQQGIATLDGLPMLIAQAAEQLARWTG 491
>gi|307718011|ref|YP_003873543.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6192]
gi|306531736|gb|ADN01270.1| 3-dehydroquinate dehydratase, type 1 [Spirochaeta thermophila DSM
6192]
Length = 491
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 241/499 (48%), Gaps = 31/499 (6%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
+C+ + G + + + + DL+E+R D + E + +P + T R
Sbjct: 5 VCLSLTGRTRKEAETQLARWREE-VDLLEVRADCMDE-GEWEGLGEWASGLGLPAILTLR 62
Query: 86 PIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
+GG ++G E+ + L L + G Y+DVE A D R + VI S H
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELIRQGGWAYVDVEAWAADWLVDEARRRG---MYVIRSRH 119
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITD-----VARVFQITVHSQVP--II 197
P EDL + + ++ G +V A L T+ V ++T P I
Sbjct: 120 VMDGVP--EDLEDWM--VETVGQGLVPKAACMLGGTEDLLRLVRLHRRLTARGLPPGSYI 175
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
L MG G+ +RIL +G LTF T + G +APG + DLY R++ T +FG
Sbjct: 176 LLGMGPYGVPTRILSLAWGSLLTF-TSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFG 234
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
+IG PV HS+SP L+N ++ G + V++ + VD++A F G S TIPHKE
Sbjct: 235 VIGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDELASFMDLADELPLQGLSVTIPHKEG 294
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
+ D V +++G+ N ++RR DG FG +TD G + + R ++ G
Sbjct: 295 VIPFLTVCDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPL------REEIARGGDP 346
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHALSLADLE 435
+ K VV+GAGGA +A+ YG +G RV++ NRT +RAR LA G ALS E
Sbjct: 347 VM--KAAVVLGAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAGEFGVDWGALSPESAE 404
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
G+I+ TTS+GM+ K +P+P + + +D VYTP+IT L A +G
Sbjct: 405 RMREFRGLIV-QTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAGCR 463
Query: 496 IVSGLEMFIGQAYEQYERF 514
I++G M QA EQ F
Sbjct: 464 IITGDRMLEAQAEEQMRLF 482
>gi|62319331|dbj|BAD94599.1| putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 139
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 112/127 (88%)
Query: 393 GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452
GKALAYGAK KGA+VVIANRTY+RA +LAE +GG ALSL DL+N++PEDGM+LANTTS+G
Sbjct: 1 GKALAYGAKEKGAKVVIANRTYERALKLAEAIGGKALSLTDLDNYHPEDGMVLANTTSMG 60
Query: 453 MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYE 512
MQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA VSG EMF+ QAYEQ+E
Sbjct: 61 MQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFE 120
Query: 513 RFTGLPG 519
FTGLP
Sbjct: 121 IFTGLPA 127
>gi|94263740|ref|ZP_01287547.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93455840|gb|EAT06003.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 161/265 (60%), Gaps = 17/265 (6%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCT 311
T+V+GIIG PV HS SP+++N AF + G N ++ D A + + AG S T
Sbjct: 7 QTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGVSVT 66
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK+A + D++D VA +IGAVN I+R+ DG+L GYNTD++GA A+E L
Sbjct: 67 IPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAEL------ 118
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
ALAG +V+GAGG+ +A+ +G K GAR+ +A+RT + R+LA +G L L
Sbjct: 119 ------ALAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGCPWLPL 172
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
A+ + + L N TS+GM P D++P+P ALG++ +V D VY+P T+LL+EA
Sbjct: 173 AEAGDRQAD---ALVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATKLLQEARA 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
+G + GL+M + Q Q+E +TG
Sbjct: 230 AGCRTIDGLQMLLHQGAAQFELWTG 254
>gi|339500912|ref|YP_004698947.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
gi|338835261|gb|AEJ20439.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
Length = 498
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 256/521 (49%), Gaps = 61/521 (11%)
Query: 26 ICVPIMGESV--DKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
+C+ + G+++ D +VD +A D+VE+R+D L + + R I+ + +PT+ T
Sbjct: 4 VCLCLTGKTIVKDLELVDRYRAYI---DVVELRVDFL-DPDERFYIRRFPALAGIPTILT 59
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + E R+ +L + Y+D+E + AR F
Sbjct: 60 VRRKIDGGNFKEGEGARIVLLAAGLAFADTDQRRNFAYVDLEEDLDVPSLEEAARTFG-- 117
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S HN+ E+L + ++ +G +I K A + DVAR+F++
Sbjct: 118 --------TKIIRSYHNFHGVD--ENLEQKLRSLRRTGDEIAKVAVMPHNYDDVARLFKV 167
Query: 189 TVHSQ-VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI-------VSAPGQPTIKDL 240
++ + I + MG G+ +RIL + G L+F + I V+ PGQ + L
Sbjct: 168 ADSTKDMEKILIAMGPHGVSTRILAERLGSHLSFTSPIAEIESDSEIQVAGPGQLDPRTL 227
Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
+D Y FR + TKV+GIIG P+ + SP ++NE + + N V++ V D++ FF
Sbjct: 228 VDTYRFRSLNHKTKVYGIIGYPLSATASPQIHNEGYSRLKMNAVYIPFPVQDLSSFFNLA 287
Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
+ + G S TIPHKEA + C + IG+ N ++R + YNTD G +
Sbjct: 288 ETLNIQGLSVTIPHKEAVLTYCSQRSPEVDRIGSCNTLVR--APQGWAAYNTDAQGFSDS 345
Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
+ + + G+ N L K +IGAGG KA+A R ++ NRT RA+E+
Sbjct: 346 LLEFI-GKPN--------LLFKRVTIIGAGGVAKAVASEIHRLKGRALVLNRTPLRAKEI 396
Query: 421 AETV-----GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
AE + G A + ++++ I+ TTS+GM+P +DE PI + +V D
Sbjct: 397 AEPLNFAWAGLDARGIELIDHYRD----IIIQTTSVGMEPNIDEDPIELYKFRGKEVVMD 452
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y P+ T+LL+ A ++G ++G +M + QA Q+ FTG
Sbjct: 453 LIYKPEETKLLKRAAKAGCKTLNGYDMLLRQAKLQFSLFTG 493
>gi|94266091|ref|ZP_01289808.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93453336|gb|EAT03770.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 160/263 (60%), Gaps = 17/263 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+V+GIIG PV HS SP+++N AF + G N ++ D A + + AG S TI
Sbjct: 8 TEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGVSVTI 67
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK+A + D++D VA +IGAVN I+R+ DG+L GYNTD++GA A+E L
Sbjct: 68 PHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAEL------- 118
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
ALAG +V+GAGG+ +A+ +G K GAR+ +A+RT + R+LA +G L LA
Sbjct: 119 -----ALAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGCPWLPLA 173
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+ + + L N TS+GM P D++P+P ALG++ +V D VY+P TRLL+EA +
Sbjct: 174 EAGDRQAD---ALVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATRLLQEARAA 230
Query: 493 GATIVSGLEMFIGQAYEQYERFT 515
G + GL+M + Q Q+E +T
Sbjct: 231 GCRTIDGLQMLLHQGAAQFELWT 253
>gi|328952377|ref|YP_004369711.1| shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
gi|328452701|gb|AEB08530.1| Shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
Length = 275
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 151/266 (56%), Gaps = 17/266 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T +FGI+G+PV HS SP ++N AF ++G N V+V V D+ Q + G S TI
Sbjct: 6 TIIFGILGRPVAHSLSPAMHNAAFAALGLNAVYVPFAVQDLVAAVQGLRGLNIGGVSVTI 65
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P KE + DEVD A++IGAVN ++ RQ G L+G NTD+ GA++ +++ +
Sbjct: 66 PFKEEIIPLLDEVDEEAQTIGAVNTVVNRQ--GWLWGCNTDWQGALTPLQEQI------- 116
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
AL+G+ +V+GAGGAG+A+ Y + V +A+ DRAR LA+ G L
Sbjct: 117 -----ALSGQQIMVLGAGGAGRAIVYAVRRAAGLVTVADLNPDRARNLAQEFGVACLP-- 169
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
LE + +L N + +GM P ++ TP+P L + +V D VY P TRLLREA
Sbjct: 170 -LEEIDQSTATVLINASPVGMAPHIEATPLPARCLDRFQVVMDIVYQPLQTRLLREAAAR 228
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLP 518
GA + GL+M I Q Q+E FTG P
Sbjct: 229 GARTIDGLQMLIHQGARQFELFTGQP 254
>gi|330836654|ref|YP_004411295.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
gi|329748557|gb|AEC01913.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
Length = 485
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 258/500 (51%), Gaps = 34/500 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
++C+ + G ++ + + + N VE+RLD L+ R +L ++ PVP + T
Sbjct: 1 MLCLTLTGRTLLENISQYER-NKDWVGAVELRLDYLEESEARLA-GSLPEQFPVPMILTC 58
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
R +GG E +R+ +++ ++ GA Y+D+E + + + + +K ++I S
Sbjct: 59 RRESDGGLCTSTERKRLSLMKEVLDRGAFAYVDLEDDLKKTEAEQLARRK--GIRIIRSH 116
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP------II 197
H++ P+ D+ +ARI A G DI K A T + DV R+F+I ++P +I
Sbjct: 117 HDFSGMPA--DIYARMARILAKG-DIPKLAVTPHTVEDVIRLFRI--KDEIPGSTEKIVI 171
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
G MG G+ +RIL K G + F E APG + + L ++Y ++ +T++FG
Sbjct: 172 G--MGVLGIPTRILYRKIGSSMMFCCDEAAESVAPGMLSARVLSEVYGADKVDAETEIFG 229
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
IIG PV S SP+++N F+++ N ++ VD + FF+ D GFS T+P K
Sbjct: 230 IIGNPVSQSASPLIHNPGFRAIKKNAIYSLFPVDAVRPFFRLADVLDIRGFSVTVPFKRD 289
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
+ + K IG+ N ++R + K G NTDY G +S + + SG V +
Sbjct: 290 VIPYLGTISREVKQIGSCNTVVRVKDLWK--GINTDYHGFLSQLMPAI-----TSGRVRT 342
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHALSLADLEN 436
AL ++GAGGA +A+A+ ++ I NR+ + AR+L AET+ G + L ++
Sbjct: 343 AL------ILGAGGAARAVAWALHNHSVKITILNRSAEAARKLAAETMAGWDV-LENISE 395
Query: 437 FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI 496
++ + MI+ TTS+GM P DE P + + +D VY P TR L A E+G +
Sbjct: 396 YSGKSDMIV-QTTSVGMTPDSDEDPSAGYVFSGKEIAYDLVYKPHQTRFLLRAAEAGCEV 454
Query: 497 VSGLEMFIGQAYEQYERFTG 516
+ G +M + Q Q+E FTG
Sbjct: 455 IYGAQMLLEQGKLQFEAFTG 474
>gi|51246864|ref|YP_066748.1| shikimate 5-dehydrogenase [Desulfotalea psychrophila LSv54]
gi|50877901|emb|CAG37741.1| probable shikimate 5-dehydrogenase [Desulfotalea psychrophila
LSv54]
Length = 296
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 155/266 (58%), Gaps = 17/266 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T V+GIIG PV HS SP+++N AF+S+G + V+V V+D+ Q + G S TI
Sbjct: 19 TAVYGIIGNPVSHSMSPLMHNAAFESLGIDAVYVPFRVEDVESAVQGLRGLNICGVSVTI 78
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLN 370
PHKEA + DEVD VA IGAVN I+ DG+ F G+NTD++GA A++
Sbjct: 79 PHKEAVIPLLDEVDPVAGKIGAVNTIVSSMRDGRPFLKGFNTDWIGANRALQ-------- 130
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+L GK +++GAGG+ +A+ +G GA V++ +RT R R+LA+ G LS
Sbjct: 131 ----AVVSLKGKQVLLLGAGGSARAIGFGLLEAGAEVILCSRTPSRGRQLADEFGCLWLS 186
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L D+ + + I+ N TS+GM P+ D + + L V D VY+P TRLL A+
Sbjct: 187 LEDIGSVRAD---IVVNATSVGMAPQEDVSLMTVEQLSGVEAVMDIVYSPHRTRLLANAD 243
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTG 516
++G IVSGLEM + Q +Q+E + G
Sbjct: 244 KAGCAIVSGLEMLLYQGVQQFELWQG 269
>gi|218779608|ref|YP_002430926.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218760992|gb|ACL03458.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
Length = 274
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 150/264 (56%), Gaps = 17/264 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+++ + G PV HS SP ++N AF +G N ++ V D+ + + D G S TI
Sbjct: 9 TRLYAVFGDPVAHSLSPAMHNRAFTHIGENAAYMAFRVKDVQGAVRAIRAFDMGGASVTI 68
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK + ++ DEVD A+++GAVN I+ Q G+L G N+D +GA+ AI++
Sbjct: 69 PHKISVMEHLDEVDETARAMGAVNTIVNDQ--GRLIGKNSDCLGAVKAIQE--------- 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ + GK VVIGAGGA +A+ YG K +GARV I NRT ++ +LAE +G +
Sbjct: 118 ---KTPVKGKDVVVIGAGGAARAVIYGLKQEGARVTIVNRTMEKGAQLAEELG---VDFQ 171
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+E+ D I N TS+GM P V ++P P L D VY P +TR L +A ++
Sbjct: 172 PMEDLGKLDCRIAVNATSVGMVPNVQDSPAPASLFNKEMLAMDIVYRPLLTRFLSDARDA 231
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G TIV G+ MF+ Q Q+E +TG
Sbjct: 232 GCTIVDGIAMFVYQGASQFEWWTG 255
>gi|46446516|ref|YP_007881.1| 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphat e synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400157|emb|CAF23606.1| putative 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphate synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 939
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 244/506 (48%), Gaps = 39/506 (7%)
Query: 19 MRKNPTL----ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK 74
M + P+ +CV ++ + D + + + S DL+EIRLD L + E + L +
Sbjct: 9 MAQKPSFHSCQLCVSLIDLTCDAFIYQIQQL-PSQVDLIEIRLDKLLKIDFAE-LDRLKE 66
Query: 75 ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
+ P ++T R +GG + G+ ++ + + + D++D+E + E+ ++ P
Sbjct: 67 IAHRPLIWTLRKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQELQKISP 126
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV---- 190
+ + I+S H + TP L + ++ A + K A I D ++ ++
Sbjct: 127 Q-TQWIISWHEVKETPH---LKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQENK 182
Query: 191 HSQ-VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
HS+ + IGL G +G +RIL G TF +L+ G+ SAPGQ + + L Y F+++
Sbjct: 183 HSRRLCTIGL--GMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL 240
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAG 307
T++FG+IG P+ S S + +N + N V++ V+ ++ FFQ G
Sbjct: 241 SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRG 300
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA--IEDGL 365
FS T+PHKE VK ++ +S A N ++ S + G NTD +GA+ A +ED
Sbjct: 301 FSVTMPHKE-RVKKILALNMDDESHLACNTLLF--SSSIINGTNTDGIGALKALKVED-- 355
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
L K +++GAGG +A+AY AK +GA V I NRT RA+++AE +
Sbjct: 356 -------------LKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKIQ 402
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L+ + IL TTS+GM P VD + + D + P T
Sbjct: 403 VKWGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLF 462
Query: 486 LREAEESGATIVSGLEMFIGQAYEQY 511
L++A G I G+E+FI QA Q+
Sbjct: 463 LQKARLKGCEIHHGIELFIHQAAFQF 488
>gi|224130898|ref|XP_002328403.1| predicted protein [Populus trichocarpa]
gi|222838118|gb|EEE76483.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 142/230 (61%), Gaps = 39/230 (16%)
Query: 38 MVVDMGKANASGADLVEIRLDGLKNFNPRE----------------------NIKTLIKE 75
M++ M A GAD+V D L NFNP + N+K+
Sbjct: 1 MLIPMRNAKKIGADVV----DCLTNFNPHQGKDQVEQYLLLSLWHLFGFCSTNVKSF--- 53
Query: 76 SPVPTLFTY----RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRG 131
S + ++F RPIWEG QY+GDE +R + LRLAM+L A+YIDVEL++ EFNDS+ G
Sbjct: 54 SQLISVFVKSVLSRPIWEGSQYEGDETKRREALRLAMQLRANYIDVELEIVHEFNDSMDG 113
Query: 132 KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-ITV 190
KKP+K KVIVSSHN+ TP+ E +++LVARIQA+GAD+VK +T ALDI D + F
Sbjct: 114 KKPDKFKVIVSSHNFHNTPTPETIADLVARIQATGADMVKISTAALDIKDYGKHFSGYGT 173
Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
S+V V GERGLIS +L KFG +LT G LE G +SAPGQ T +DL
Sbjct: 174 FSRV-----VWGERGLISWLLSRKFGSYLTHGALEAGAISAPGQSTAEDL 218
>gi|381179077|ref|ZP_09887939.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
gi|380769025|gb|EIC03002.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
Length = 502
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 251/518 (48%), Gaps = 48/518 (9%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
MRK L+C+ + G+++D+ V + + D+VE+R D L+ + R NI+ V
Sbjct: 1 MRK--PLVCLCLTGKTIDE-DVRIAEEYIRYIDMVELRADCLEE-DERLNIRDFPSLVKV 56
Query: 79 PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVELQ-VAREFNDSIR 130
P L T R + +GG+Y+ E R + A+ + Y+D E + D+
Sbjct: 57 PCLLTIRRVADGGKYEEGEASRSMLFARALAFADEDKRKNFAYVDFEDDFIVPGLQDAAL 116
Query: 131 GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF-QIT 189
++I S H+ V++++ +++++ +G +I K A ++D+ +F + +
Sbjct: 117 AFG---TRIIRSFHDMNN--PVKNIAQRLSKMRMTGFEIPKIAFMPKSLSDITDLFKEAS 171
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGT----LENGIVSAPGQPTIKDLLDLYN 245
S I M GL +R+L +F +L+F + +EN V G L LY
Sbjct: 172 ALSGTEQIICAMSAFGLPTRVLAQRFNSYLSFTSPAELMEN--VKGLGHVDPVSLSSLYR 229
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF 305
FR + +T++FGI G P+ + SP ++N F N V+V + + F+ ++
Sbjct: 230 FRSIDSETRLFGITGFPLVATSSPKIHNTIFGENEMNAVYVPFKAEKAEEAFEFANTMGV 289
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GFS T+PHKE + D VD + +GA N ++R DGK G+NTD +G AI++
Sbjct: 290 CGFSVTVPHKETIIPLLDSVDKGVQEMGACNTVVR--EDGKWLGFNTDCIGFELAIKE-F 346
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
GR +L+G VIGAGGA KA+ Y K GA I NRT +AR+LAE VG
Sbjct: 347 TGR--------DSLSGMKVSVIGAGGAAKAIVYALKNLGADACIFNRTSVKARKLAEKVG 398
Query: 426 GHALSLAD-----LENFNPEDGMILANTTSIGM----QPKVDETPIPKHALGHYALVFDA 476
+ L L++++ ++ TTS GM +P PI + L++D
Sbjct: 399 FNYSGLGSDCIMKLQSYSD----LIVQTTSKGMNSTDEPNETNDPIWFYDFTGNELLYDI 454
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 514
VY P +T +++ A +G + +GL M Q EQ F
Sbjct: 455 VYEPNVTPVMKRAAAAGCRVANGLSMLRYQGEEQARIF 492
>gi|85859660|ref|YP_461862.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722751|gb|ABC77694.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
Length = 292
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 149/263 (56%), Gaps = 17/263 (6%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
+ ++G PVGHS SP++++ A K + G + V D+++ F G S TIP+
Sbjct: 24 LLALLGHPVGHSLSPLMHSTALKHLHLEGRYEAWDVSDLSQAMVDLKRKGFRGASVTIPY 83
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K + D++D A+SIGAVN +IRR DG G NTD+ G I A+
Sbjct: 84 KRDIMSFLDDIDEQARSIGAVNTLIRR-GDG-FVGANTDWEGLIRALRS----------- 130
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
+++ G+ FVV+GAGG +A YG +G V+ NRT R RELA+ G + L ++
Sbjct: 131 -VTSIRGRRFVVLGAGGTARAALYGILGEGGGAVVVNRTEKRGRELADDFGCPSYPLTEI 189
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
+ G +L NTT +GM P + +P+P L ++LV D +YTP TRLLREAE +G
Sbjct: 190 DTLQ---GDVLINTTPVGMTPNTEVSPVPSAVLSRFSLVADVIYTPLRTRLLREAERAGC 246
Query: 495 TIVSGLEMFIGQAYEQYERFTGL 517
T++SG+EMF+ Q Q+ +TGL
Sbjct: 247 TVLSGVEMFVEQGAAQFRLWTGL 269
>gi|255542476|ref|XP_002512301.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548262|gb|EEF49753.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 146
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/117 (69%), Positives = 105/117 (89%)
Query: 403 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI 462
KGARVV+ANR++D+A+ELA VGG A++LA+L++F+PE+GMILANTTS+GM+P++D+TP+
Sbjct: 17 KGARVVVANRSFDKAKELASKVGGQAMTLAELKDFHPEEGMILANTTSVGMKPRIDDTPL 76
Query: 463 PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
PK AL HY+LVFDA+YTPK+TRLLREA+E GAT V G EMFI QA+ Q+ERFTGLP
Sbjct: 77 PKEALKHYSLVFDAIYTPKLTRLLREAQECGATTVYGTEMFINQAFVQFERFTGLPA 133
>gi|115488882|ref|NP_001066928.1| Os12g0534000 [Oryza sativa Japonica Group]
gi|113649435|dbj|BAF29947.1| Os12g0534000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 105/127 (82%)
Query: 393 GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452
GKALAYGAK KGARVVIANRT+ RA+EL +G AL+LA+LEN++PE+ MILANTT+IG
Sbjct: 8 GKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHPEEEMILANTTAIG 67
Query: 453 MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYE 512
M P V+ETP+ K AL YA+VFDAVYTPK TRLLREA E GAT+VSGLEMFI QA Q+E
Sbjct: 68 MHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFE 127
Query: 513 RFTGLPG 519
FTG+P
Sbjct: 128 HFTGMPA 134
>gi|338176104|ref|YP_004652914.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
gi|336480462|emb|CCB87060.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
Length = 674
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 242/491 (49%), Gaps = 30/491 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV I G + + + +A ADLVE+RLD N + ++ L +P +FT
Sbjct: 1 MICVVIKGPTYLEARQQIERA-LPYADLVELRLDLFVNVD-ETSLLELKSIFSIPMIFTL 58
Query: 85 RPIWEGGQYDGDENERVD-VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
R +GG ++ E RV+ + RLA L Y+D+E + + I PE ++I+S
Sbjct: 59 RSQAQGGNFNQSEESRVEHIYRLAA-LKPFYLDLESHMPEDVVRDISSLHPE-IQLILSY 116
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HN Q TP E+ +L A +Q A K A TA D R+ + + +I + MG
Sbjct: 117 HNLQETP--ENFDHLYADMQKIPAHFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGP 174
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G ISRIL TF +L+ + GQ + K L++ Y +R + T ++G+IG PV
Sbjct: 175 NGQISRILGPIVNHPFTFASLDEDPKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPV 234
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
S S +N + G + V+V + V +++ F + + G S T+P K++ +
Sbjct: 235 NLSISDETHNAVLAACGMDAVYVKIPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSF 294
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
D +D A+ IGAVN + + + +++G+NTD +GA+ A+E + G
Sbjct: 295 IDHLDVKAEKIGAVNTL--QFKEDQIYGFNTDGMGAMEALE------------TKCGIQG 340
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
K V+IGAGGA +A+AY A K A V + NR+ ++A E+A G L ++
Sbjct: 341 KHVVIIGAGGAARAIAYEAVQKKALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQVG 400
Query: 442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
IL N TS+ M PI + + LV D PK++ L A + G ++ G +
Sbjct: 401 YDILINCTSVPM-------PIAFEDILLHVLVMDIKTKPKVSLFLENALKKGCQVIFGYQ 453
Query: 502 MFIGQAYEQYE 512
MFI QA Q++
Sbjct: 454 MFIAQALGQFK 464
>gi|451945874|ref|YP_007466469.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
gi|451905222|gb|AGF76816.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
Length = 273
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 148/264 (56%), Gaps = 17/264 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T ++GIIG PV HS SP ++N A ++G + V++ DIA G S TI
Sbjct: 7 TVLYGIIGNPVTHSLSPAMHNAALAALGIDAVYLPFPASDIAAAVTGIRGLGIQGLSVTI 66
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE+ + D VD VA IGAVN I+ ++ L G NTD++GA A+E+ +
Sbjct: 67 PHKESVMALLDTVDPVAVKIGAVNTIV--NTEKVLTGLNTDWLGATRALEEEID------ 118
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
L+G V++GAGG+ +A+ +G KGA + + +RT R R LA+ + +SL
Sbjct: 119 ------LSGAHAVILGAGGSARAIGFGLLEKGASITLCSRTESRGRRLADELHCPWISLE 172
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+ + G +L N TS+GM P+++ TP+ + + +V D VY P TRLLREAE
Sbjct: 173 ESDRLR---GDVLINATSVGMVPQIENTPVSEEVTSQFQVVMDIVYAPMKTRLLREAEAG 229
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I++GLEM + Q Q+E +TG
Sbjct: 230 GCKIINGLEMLLYQGVAQFEIWTG 253
>gi|337287267|ref|YP_004626740.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
gi|335360095|gb|AEH45776.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
Length = 273
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 162/263 (61%), Gaps = 21/263 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
+GIIG PV HS SP ++N AFKS+G V+ + L +++A+ + + + G S T+P
Sbjct: 4 YGIIGWPVAHSLSPAMHNAAFKSLGIRAVYGLLPLAPENLAEGIKGIRALNIKGVSVTVP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE+D VA IGAVN I+ + DG+L G+NTD++G A+E+ +
Sbjct: 64 HKETVMPLLDEIDPVASEIGAVNTIVNK--DGRLLGFNTDWIGVKKALEEKI-------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
A++G+ VV+GAGGA KA+ Y +GA V I NRT+++A+ LA+T+GG AL +
Sbjct: 114 ----AISGQKAVVVGAGGAAKAVVYALIKEGASVAIYNRTFEKAKRLAQTLGGVALPWEE 169
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
L + + G IL TTS+G+ K D++P+PK L + LV D VY P TRLLREAEE+G
Sbjct: 170 LASAS---GDILIQTTSVGL--KEDKSPVPKEVLSRFKLVMDIVYQPLKTRLLREAEEAG 224
Query: 494 ATIVSGLEMFIGQAYEQYERFTG 516
+ GL M + Q EQ+ + G
Sbjct: 225 CETIDGLSMLVYQGIEQFYLWFG 247
>gi|428180770|gb|EKX49636.1| hypothetical protein GUITHDRAFT_67756, partial [Guillardia theta
CCMP2712]
Length = 1505
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 236/486 (48%), Gaps = 39/486 (8%)
Query: 49 GADLVEIRLDGLKN---FNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105
GAD++E R+D L + N R L + + +P L+T R + +GG++ G E E + +L+
Sbjct: 1008 GADVLEFRVDLLSDCSLLNARLQHAILRRVATLPILWTVRSVSQGGKFAGSEEEMLALLQ 1067
Query: 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY-QYTPSVEDLSNLVARIQA 164
L + LG +++DVE + ++ KK +V+ S H++ + + E+L L R++
Sbjct: 1068 LGLRLGCEFVDVESCWSTAMCKAVVDKKGSS-RVVASFHDFSERAYTAEELEKLFLRLRM 1126
Query: 165 S-GADIVKFATTALDITDVA----RVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
GAD+VK A T VA + + S +P +GL MGE G +SR+L FL
Sbjct: 1127 QGGADVVKVAIRTTKATQVADMQHAINRFRARSSLPAVGLCMGEEGKLSRVL----NKFL 1182
Query: 220 TFGT--LENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
TF T L G +APGQ +D+ L + P T F + G P+ S SP ++N AF
Sbjct: 1183 TFSTHPLLPG-TAAPGQLVAEDIRRLKVELGLLPATCSFFLFGSPIAKSASPAMHNAAFA 1241
Query: 278 SVGFNG-VFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
+ G G + D++ +T SS F G S TIP KE + + A+ IGAVN
Sbjct: 1242 ACGLKGWSYERCETADVSVALETISSASFGGGSVTIPLKEELLPHMHILTDSARRIGAVN 1301
Query: 337 CI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAG 393
I ++R DG L G NTD+V ++D L R GG L ++GAGG
Sbjct: 1302 TITVKRGGDGSRILIGDNTDWVAIHRLVQDRLNMRRLAQGGEPRVL------LVGAGGTA 1355
Query: 394 KALAYG-AKAKG--ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450
+A Y K +G V++ NRT RA LA G + DL + + G+I++
Sbjct: 1356 RAAMYALKKLRGITGPVLVYNRTKSRAEALAAEFGAEVVE--DLSSVT-QLGVIVSTI-- 1410
Query: 451 IGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQ 510
P IP+ L ++ DA Y P T L + A +G ++ G M QA Q
Sbjct: 1411 ----PPDGHAVIPETLLQARPIMLDASYLPGGTSLSQRAAAAGCDLIIGPHMLFEQATYQ 1466
Query: 511 YERFTG 516
ER+TG
Sbjct: 1467 SERWTG 1472
>gi|406996985|gb|EKE15179.1| hypothetical protein ACD_12C00117G0002 [uncultured bacterium]
Length = 273
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 158/276 (57%), Gaps = 26/276 (9%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL----LVDDIAKFFQTYSSN 303
++ TK+ IIG PV HS SP ++N ++++G FV L + D+ Q+
Sbjct: 2 KISAKTKICLIIGDPVTHSLSPAMHNAGYEALGIEDKFVFLGANVNIKDVGVTIQSMRKM 61
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
G +CTIPHK +K DE+D AK IGAVN ++ + +GKL G+NTD++GA+ +E
Sbjct: 62 GIHGLTCTIPHKIEVMKLLDEIDDTAKMIGAVNTVLNQ--NGKLIGFNTDWLGAVIPLEK 119
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
+ L+ K +V+GAGGA +A+ +G + A V I NRT ++A +LA+
Sbjct: 120 ------------ITTLSEKKVLVLGAGGAARAVIFGMLKRKAMVTIFNRTKEKATKLAKE 167
Query: 424 VGGHALSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
L ++++NF+ I+ NTTS+GM+P D+TPI + + +VFD VY P
Sbjct: 168 FNCQMTDLKIESEIKNFD-----IIINTTSVGMKPLEDKTPISIKFITNKQIVFDIVYVP 222
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+LLREA++ GA I+ G EM + Q Q+E +TG
Sbjct: 223 FETKLLREAKKRGAKIIHGTEMLLHQGTAQFEIYTG 258
>gi|282891758|ref|ZP_06300239.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498342|gb|EFB40680.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 674
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 239/491 (48%), Gaps = 30/491 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+ICV I G + + + +A ADLVE+RLD N + ++ L +P +FT
Sbjct: 1 MICVVIKGPTYLEARQQIERA-LPYADLVELRLDLFVNVD-ETSLLELKSIFSIPMIFTL 58
Query: 85 RPIWEGGQYDGDENERVD-VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
R +GG ++ E RV+ + RLA L Y+D+E + + I PE ++I+S
Sbjct: 59 RSQAQGGNFNQSEESRVEHIYRLAA-LKPFYLDLESHMPEDVVRDISSLHPE-IQLILSY 116
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
HN Q TP E+ +L +Q A K A TA D R+ + + +I + MG
Sbjct: 117 HNLQETP--ENFDHLYTDMQKIPAHFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGP 174
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G I RIL TF +L+ + GQ + K L++ Y +R + T ++G+IG PV
Sbjct: 175 NGQIGRILGPIVNHPFTFASLDEDPKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPV 234
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
S S +N + G + V+V + V +++ F + + G S T+P K++ +
Sbjct: 235 NLSISDETHNAVLAACGMDAVYVKIPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSF 294
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
D +D A+ IGAVN + + + +++G+NTD +GA+ A+E + G
Sbjct: 295 IDHLDVKAEKIGAVNTL--QFKEDQIYGFNTDGMGAMEALE------------TKCGIQG 340
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED 441
K V+IGAGGA +A+AY A K A V + NR+ ++A E+A G L ++
Sbjct: 341 KHVVIIGAGGAARAIAYEAVQKKALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQVG 400
Query: 442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
IL N TS+ M PI + + V D PK++ L A + G ++ G +
Sbjct: 401 YDILINCTSVPM-------PIAFEDILPHVFVMDIKTKPKVSLFLENALKKGCQVIFGYQ 453
Query: 502 MFIGQAYEQYE 512
MFI QA Q++
Sbjct: 454 MFIAQALGQFK 464
>gi|333998596|ref|YP_004531208.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
gi|333741045|gb|AEF86535.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
Length = 506
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/524 (29%), Positives = 247/524 (47%), Gaps = 56/524 (10%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
IC+ + G+++ K + + K + D+ E+R+D L+ + R I+ +++ +P L T R
Sbjct: 4 ICLCLTGKTIAKDLEVLEK-HRKYVDMAELRVDHLEP-DERLLIRRFPEQAGLPVLLTIR 61
Query: 86 PIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVEL--------QVAREFNDSIR 130
+GG++ G E R+ + + AD Y+D+E + AR F
Sbjct: 62 RKMDGGKFAGGEGARISLFSKGLAFAEADRRHNFAYVDLEEDLNVPSLEEAARTFG---- 117
Query: 131 GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV 190
++I S HN Q EDL + + G +I K A DV RV++
Sbjct: 118 ------TRIIRSYHNLQGVD--EDLPGKIRGLLHVGDEIAKVAVMPHGFDDVLRVYRAAK 169
Query: 191 HSQ-VPIIGLVMGERGLISRILCAKFGGFLTFGTLE------NGIVSAPGQPTIKDLLDL 243
+ + I L MG G +RIL G L++ + E + +APGQ + ++L++L
Sbjct: 170 DTAGIEKILLCMGHMGTSTRILAEYLGSHLSYASAEGTEQDSDFPPAAPGQISPRELVEL 229
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y FR++ T++FGI+G P+ S SP +N F S + V+V D + F Q +
Sbjct: 230 YRFRELTSQTRLFGILGYPLKVSSSPAFFNAVFTSENTDAVYVPFPSDSVDPFMQLAAEI 289
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
G S TIP+KE + ++ +++GA N +I + DG G NTD G ++ D
Sbjct: 290 KLQGVSVTIPYKEKVIPYLNKKLGDVETLGACNTLI-AEEDG-WTGANTDARGFSDSLLD 347
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
+ G+ N G +IGAGG KA+A + +I NRT RARE A
Sbjct: 348 FI-GKTNFKGC--------RITIIGAGGVSKAVAAEIFRLKGKALILNRTVPRAREEAAP 398
Query: 424 VGGHALSL----ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
SL A+L N + I+ TTS+GM P ++ P+ +A +V D +Y
Sbjct: 399 YRFAWGSLDTHGAELMNAYSD---IIVQTTSVGMDPDIEGDPLEIYAFKGTEVVMDLIYK 455
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG--LPGKM 521
P+ TR L A +G +++G +M I QA QY + G P K+
Sbjct: 456 PERTRFLIRAAAAGCRVMNGHDMLIRQAKYQYSYYLGKEYPSKL 499
>gi|390956953|ref|YP_006420710.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
gi|390411871|gb|AFL87375.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
Length = 512
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 240/501 (47%), Gaps = 41/501 (8%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPTL 81
+CV + G+ + + + + N VE RLD L + P + L + V +
Sbjct: 23 VCVAVSGDGMIALAAETVRTN----PFVEFRLDSLAD--PAAMLPALRQFLFGNRDVTAV 76
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN----DSIRGKKPEKC 137
T R GG + GD ++ +LR A G +D+E++ A E + +RG
Sbjct: 77 ATCRRKAFGGDFGGDARAQIAILREAALAGCRLVDIEVETAEELGQAALEELRGAG---A 133
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH--SQVP 195
VI+S H++Q TP +E + + R++ D+ K TA + D R+ + +
Sbjct: 134 AVILSWHDFQATPELEPV---LERMRPFAPDVYKIVPTAKTLRDALRLIDVLEKHGGEGN 190
Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
++ + MG +G ++R+L +FG TF + + +APGQ ++ L +LY ++ T +
Sbjct: 191 LVAMSMGFKGTLTRVLGPRFGSLFTFASADGHGGTAPGQVSVSVLRELYRVDEISSQTAI 250
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+ + G+P+ S SP + N AF G + V++ L D + + + G S T+P K
Sbjct: 251 YAVAGEPITGSMSPRMQNTAFADAGMDAVYLPLETSDPKELLEVAERLNIRGLSITMPLK 310
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E + D + GA N ++R + DGKL G+NTD I+ I + L R+
Sbjct: 311 ELVMPLLAFRDRSVEQAGACNTLLRHR-DGKLAGFNTD----IAGIVEPLARRIT----- 360
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL- 434
L G +V+GAGGA +A YG +GA V + NRT +RA LA G + L
Sbjct: 361 ---LKGARVLVLGAGGAARAAVYGLVERGATVFLLNRTTERAEMLAAESGARVQARETLA 417
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
E + D ++ N+T GM+ + + PI + + + + FD VY P T L+ A GA
Sbjct: 418 ETYF--DAIL--NSTPYGMRGQTMDAPITQAEM-NCRVFFDLVYNPLETPLIVAARARGA 472
Query: 495 TIVSGLEMFIGQAYEQYERFT 515
I+ G+ MF+ Q Q+ +T
Sbjct: 473 EIIPGVAMFVEQGARQFSLWT 493
>gi|333995685|ref|YP_004528298.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
gi|333734548|gb|AEF80497.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
Length = 504
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 243/511 (47%), Gaps = 45/511 (8%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP----VPTL 81
IC+ + G+++ + + + K D+ E+R D L +P E LI+ P +P +
Sbjct: 4 ICLCLTGKTLARDIEVLQKYQKY-VDIAELRADCL---DPDERF--LIRRFPEMAGLPVI 57
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVELQVAREFNDSIR-GKK 133
T R +GG+Y G E R+ +L + AD Y+D+E + + S+ +
Sbjct: 58 LTIRRSLDGGKYVGGEGARITLLSKGLAFAEADRRRNFAYVDLEDDL---YVPSLEEAAR 114
Query: 134 PEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH-S 192
++I S HN DL+ + ++ G ++VK A + D RV+Q S
Sbjct: 115 TYGTRIIRSYHNMNGVD--HDLAAKLRELRRVGDELVKAAVMPQSLDDTIRVYQAAKETS 172
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLE---NGIVSAPGQPTIKDLLDLYNFRQM 249
+ I L MG+ G+ +RIL G +L++ T++ + A GQ ++L + ++FR++
Sbjct: 173 DLEKILLCMGDYGVSTRILAEPMGSYLSYTTVKGEPDMPAGASGQLDPRELAEQFHFREI 232
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
TK+FG+ G P+ S SP +N F + V++ D I + +G S
Sbjct: 233 TGKTKIFGVTGFPLKVSASPHFFNTVFDIEKTDAVYIPFPADSIHSLIRLAEEIRISGVS 292
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+P+KE+ + + +SIGA N I+ +DG + GYNTD G ++ L
Sbjct: 293 VTVPYKESVLPFLFCKSDLVQSIGACNTIVS-SADGWM-GYNTDAQGFTDSL-------L 343
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
SG L GK ++GAGG +A+A + +I NRT RAR++A +
Sbjct: 344 EFSG--RKDLRGKRVTIVGAGGVSRAVAAEVYRLKGKALILNRTAVRARDVALP---YKF 398
Query: 430 SLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+ A L+N E I+ TTS+GM+P D PI + LV D +Y P TR
Sbjct: 399 AWASLDNKGIEMMEKYADIIIQTTSVGMEPLPDADPIEFYHFTGKELVMDLIYKPAKTRC 458
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L AE SG I++G +M I QA QY F G
Sbjct: 459 LVRAEASGCRILNGYDMLIRQARYQYTYFMG 489
>gi|393233433|gb|EJD41005.1| Pentafunctional AroM protein [Auricularia delicata TFB-10046 SS5]
Length = 1557
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 232/487 (47%), Gaps = 43/487 (8%)
Query: 48 SGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDV 103
+GAD VE+R+D L + + RE + L + +P ++T R +GG + D E +D+
Sbjct: 1074 TGADAVELRVDLLASTDHAYVREQVALLRGATSLPIVYTVRTKAQGGAFPDEKTKEALDL 1133
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT-----PSVEDLSNL 158
+ L L +Y+DVEL + D++ K K KVI S H++ P V+ L
Sbjct: 1134 IELGRRLACEYLDVELSLPVAGVDTLVKNK-GKSKVIASWHDWSGKMRWDGPDVKAKYAL 1192
Query: 159 VARIQASGADIVKFATTALDITD--VARVFQITVHS--QVPIIGLVMGERGLISRILCAK 214
A DIVK A I D R F +V + P++ + MG G +SRIL
Sbjct: 1193 AAAF----GDIVKIVGAANSIQDNFALRRFVDSVSGPGRPPVLAINMGAAGQMSRILNPV 1248
Query: 215 FGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
+T L +APGQ ++ + + + P + F + G P+ S SP L+N
Sbjct: 1249 LSP-VTHPLLPT--RAAPGQLSVAQIQQALHLLGLLPARQFF-LFGTPISKSMSPTLHNT 1304
Query: 275 AFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIG 333
FK +G + L ++ + + N F G S TIPHK A + D V A++IG
Sbjct: 1305 GFKELGLPHTYGLLETAEVDETIRAALKDNAFGGASVTIPHKLAIIPLLDAVSPHAQAIG 1364
Query: 334 AVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAG 393
AVN +I RQ+DG L+G NTD+ G ++ + +G V+GAGG
Sbjct: 1365 AVNTVI-RQADGSLYGDNTDWRGIVACVGTPPQGEWT-------------GCVLGAGGTA 1410
Query: 394 KALAYGAKAKGA-RVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTS 450
+A Y KA GA RV + NRT A LA +G HA ++ADL + P +I++ +
Sbjct: 1411 RAAVYALKALGASRVWVVNRTRANADSLAAALGPGVHAANVADLASAPP--AVIVSTVPA 1468
Query: 451 IGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE-ESGATIVSGLEMFIGQAYE 509
G + A +V D Y P T LL+ A+ ++G +V G+E+ + Q Y
Sbjct: 1469 AGTESAAWLKARELFARAEGGVVVDMAYAPLETPLLKLAKAQAGWRVVPGIEVLLEQGYC 1528
Query: 510 QYERFTG 516
Q+E +TG
Sbjct: 1529 QFELWTG 1535
>gi|297568001|ref|YP_003689345.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
gi|296923916|gb|ADH84726.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
Length = 270
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 152/263 (57%), Gaps = 17/263 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+V+GIIG PV HS+SP ++N AF + G N V+V L D A + AG S TI
Sbjct: 8 TEVYGIIGNPVRHSRSPAMHNAAFAACGLNKVYVPLPALDGAAAVAAIRTLGIAGASVTI 67
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE ++ D+VD VA IGAVN I+RR + L G NTD++GA A+ + L
Sbjct: 68 PHKETVIEQLDKVDPVAARIGAVNTIVRRGDE--LHGANTDWLGANQALGEALE------ 119
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
LAG +++GAGG+ +A+ +G + GA+V++A+RT +R +ELA+ +
Sbjct: 120 ------LAGAKVLLLGAGGSARAIGFGLREAGAKVILASRTPERGQELAQQLD---CPWV 170
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
LE + L N TS+GM P +++P+P AL + +V D VY+P TRLLREAE +
Sbjct: 171 PLEQAAEQAANALVNATSVGMAPLAEQSPLPAAALAAFPVVMDIVYSPLQTRLLREAEAA 230
Query: 493 GATIVSGLEMFIGQAYEQYERFT 515
G + GL M + Q Q+ +T
Sbjct: 231 GCHCIDGLAMLLYQGAAQFTMWT 253
>gi|224369347|ref|YP_002603511.1| hypothetical protein HRM2_22490 [Desulfobacterium autotrophicum
HRM2]
gi|223692064|gb|ACN15347.1| AroE1 [Desulfobacterium autotrophicum HRM2]
Length = 271
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 150/265 (56%), Gaps = 17/265 (6%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCT 311
DT+++ + G PV HS P+++N AF+ NGV++ V I + + AG S T
Sbjct: 5 DTRLYALFGDPVAHSLGPVMHNAAFQKANINGVYLAFRVPRIDDAIASMKALGIAGASVT 64
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKE + D +D +A+ +GAVN II R DG LFGYNTD +GA+ +E
Sbjct: 65 IPHKETVIPLLDRIDPLARGMGAVNTIINR--DGMLFGYNTDCMGAVDPLE--------- 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
GV L G+ VV+GAGGA +A+A+G + +GA I NR+ R R LA+ +G +
Sbjct: 114 --GVCD-LKGRRVVVLGAGGAARAVAFGIRQQGAIPFIVNRSIKRGRTLADELGAAFIPK 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
AD+ +P+ I+ N T+IGM P D P+ L +V D VYTP T L++ A E
Sbjct: 171 ADIATVDPD---IIVNATAIGMAPDNDAIPLDPEILKPGMVVMDIVYTPVRTALIKAAAE 227
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
G T++ G+ MF+ Q Q+E FTG
Sbjct: 228 RGCTVIDGMAMFVNQGALQFELFTG 252
>gi|124486464|ref|YP_001031080.1| hypothetical protein Mlab_1652 [Methanocorpusculum labreanum Z]
gi|124364005|gb|ABN07813.1| shikimate 5-dehydrogenase [Methanocorpusculum labreanum Z]
Length = 473
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 234/486 (48%), Gaps = 62/486 (12%)
Query: 44 KANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR-PIWEGGQYDGDENERVD 102
+A + GA+ +E RLD P VP++ T R P+ E ER +
Sbjct: 22 EAISKGAEALEFRLDSF----PVIPADLSFLSCGVPSIATLRSPLDE---------ERKE 68
Query: 103 VLRLAMELGADYIDVELQVAREFNDSI-RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVAR 161
+ A+ GA YID+E +DS+ RG+ P K +VI S H+++ TP+ +++ +
Sbjct: 69 IFIRALSSGATYIDIE-------SDSVLRGQFP-KEQVICSYHDFEKTPADDEILTIFKD 120
Query: 162 IQASGADIVKFATT-ALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+Q+SG F D+ V + P I + MG G ++RI A+ G L
Sbjct: 121 LQSSGIPKAAFMVRGPADLLAVWNAASVLRERGYPFIFIGMGAAGEVTRIRAAELGSMLN 180
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
+ L + SAPGQ T+++ ++G D ++ + G P+ H+ SP ++N AFK+
Sbjct: 181 YCALRPELASAPGQITLEEA------ERLGTDPQITAVTGYPLTHTFSPEIHNAAFKAAK 234
Query: 281 FNGVFVHL--------LVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI 332
G +V + L+ D+ K ++ G + TIPHKE+ + +D +A+S
Sbjct: 235 IRGRYVKIPAASQEVPLIPDVIKKYR------IIGMNVTIPHKESVIPLLKRIDPLAESA 288
Query: 333 GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA 392
GAVN I R S L GYNTD +G +++ V ++IGAGGA
Sbjct: 289 GAVNTI--RNSPAGLEGYNTDILGIAASL-----------ASVDMDPKDADVLIIGAGGA 335
Query: 393 GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452
KA A K+ GAR+ I NRT+ RA LAE G A+ L DL PE +IL N T G
Sbjct: 336 AKAAAAYLKSAGARLSITNRTHSRAETLAEIFGARAVKLEDLA---PEYQLIL-NATPAG 391
Query: 453 MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA-TIVSGLEMFIGQAYEQY 511
M +P+P +V D +Y P++T LL A+ +G ++G M I QA +
Sbjct: 392 MSGFEHCSPVPNTLFTKDTVVMDMIYDPEVTPLLAAAKAAGVRACINGKTMLIEQAAASF 451
Query: 512 ERFTGL 517
+TG+
Sbjct: 452 TLWTGI 457
>gi|261405559|ref|YP_003241800.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282022|gb|ACX63993.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 288
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 149/282 (52%), Gaps = 26/282 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
D + G++G P+GHSKSP +++ A ++G +G +V H+ + Q F G +
Sbjct: 10 DYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKVLGFRGVN 69
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK +K D VD A+ IGAVN I+ +GKL GYNTD +G + +++D
Sbjct: 70 VTIPHKVEVMKYLDVVDEGAQRIGAVNTIV--NDNGKLTGYNTDGIGYVRSLKDE----- 122
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA 428
L GK VVIGAGGA + + Y +G ++ I NRT +A LAE G
Sbjct: 123 -----ACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALALAEEWG--- 174
Query: 429 LSLADLENFNPE-------DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
SLADL + E D ++ NTTS+GM P+V E PIP ++ +V D +Y P
Sbjct: 175 -SLADLRGYGEEQAGEALSDADVIINTTSVGMFPRVSELPIPPESIREGIVVSDLIYNPL 233
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T LLR+ E TI GL MFI Q +E +TGL + A
Sbjct: 234 KTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQA 275
>gi|299473659|emb|CBN78053.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Ectocarpus siliculosus]
Length = 696
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 222/486 (45%), Gaps = 33/486 (6%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTLIKESPV--------PTLFTYRPIWEGGQYDGDENER 100
G D +E+R+D L + E+ T++++ + P +FT R + G + D +
Sbjct: 205 GVDAMELRVDLLAD---NEDPYTVLRQLSILRRHTGYLPVVFTIRSKGQCGAFPDDPEKI 261
Query: 101 VDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ R + G + +DVE + + + G+ ++ S H + E
Sbjct: 262 FRLARWGLRAGCEVMDVEANWPMSYREGLIREAGENYPGAVLVGSYHVVGRKTTEEQAKE 321
Query: 158 LVARIQASGA-DIVKFATTALDITDVARVFQI--TVHSQVPIIGLVMGERGLISRILCAK 214
L GA D VK TTA + D RV ++ VP IGL + E G +SR+L +
Sbjct: 322 LFMECYHDGAVDGVKVVTTAFEPEDSIRVHAAAKSLALPVPYIGLCLTETGKLSRVLNKR 381
Query: 215 FGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYN 273
F T T EN V+APGQ + K+++ + P + F + G P+ S SP ++N
Sbjct: 382 F----TPVTHENLPFVAAPGQMSSKEIMHHRAELGLCP-PRSFFLFGSPISASPSPDMHN 436
Query: 274 EAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIG 333
F+S G + +D A + S DF G S TIPHK+ + DEV A++IG
Sbjct: 437 AGFRSTGLPHEYFLCEGEDPAIMAEALSRPDFGGASVTIPHKQNVLPLLDEVSEAAEAIG 496
Query: 334 AVNCII----RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA 389
AVN ++ +L G NTD++G + + + RL S G G VV
Sbjct: 497 AVNTVVVGTDPETGARRLRGDNTDWLGILRPV----KARLEASSGWEQGRGGVALVVGAG 552
Query: 390 GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT 449
G A AL + + G VV+ NRT +A ELA GG A+S D E G +
Sbjct: 553 GAAMGAL-FAMQRLGLEVVVYNRTPSKAEELAGRFGGAAVSALDAETLEKACGAAAVDVV 611
Query: 450 SIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE 509
+ P E +P + L +VFDA Y P +T LL +A+E+ V G +M + Q E
Sbjct: 612 -VSTIPAAAEFTLPDYLLESKPVVFDAAYKPALTSLLAQAKEAQCPYVQGADMLVEQGLE 670
Query: 510 QYERFT 515
Q++ +T
Sbjct: 671 QFQLWT 676
>gi|251798006|ref|YP_003012737.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
gi|247545632|gb|ACT02651.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
Length = 293
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 151/275 (54%), Gaps = 28/275 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T ++G+IG PV HSKSPI+ N AF+ G NG ++ H+ D + +F + G +
Sbjct: 19 TVLYGVIGDPVRHSKSPIMMNRAFRETGINGAYMAFHISPDKLGEFVAGIRAMGIRGVNV 78
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A++IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 79 TIPHKLDIMKYMDEIDAGAQAIGAVNTIV--NDNGRLTGYNTDGIGYVRSLKEE------ 130
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
LAGK +VIGAGGA + + Y A + + + IANR+ +RA ELA++
Sbjct: 131 ----AEPELAGKRILVIGAGGASRGIVYALAGEQPSGITIANRSVERAEELAQSF----R 182
Query: 430 SLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
SLAD+ DG+ I+ NTTS+GM P D TPI L A+ D +Y P
Sbjct: 183 SLADIRAI-ANDGLQAACKEADIVINTTSVGMHPNTDATPIDAAWLKPGAVASDLIYNPL 241
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+ L +AE G + GL MFI Q +E +TG
Sbjct: 242 RTKFLLDAERHGCRVHGGLGMFIYQGAYAFEYWTG 276
>gi|228916966|ref|ZP_04080527.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842687|gb|EEM87774.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 164/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L + +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|389581076|ref|ZP_10171103.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
gi|389402711|gb|EIM64933.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
Length = 266
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 150/265 (56%), Gaps = 18/265 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+++ + G P HSK P+++N AFK N V++ V D A Q + D G S TI
Sbjct: 6 TRLYCLFGNPARHSKGPVIHNAAFKDKDINAVYLAFEVQDAAGAAQAVRTLDIKGASVTI 65
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P KE+ ++ D +D A++IGAVN I+ +G L GYNTD A++ +
Sbjct: 66 PFKESIMEHIDWIDPTARAIGAVNTIV--NENGVLKGYNTDCQAAVAPL----------- 112
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V ++GK ++GAGGA +A+A+G +A+ ++I NRT + R LAETV +
Sbjct: 113 --VPFGISGKTVCIVGAGGAARAVAHGIEAQNGDIIITNRTEQKGRALAETVNARFIPAE 170
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++EN + ++ NTTSIGM PK +E P AL +V D VYTP TRLL AE+
Sbjct: 171 EMENIQAD---VIINTTSIGMTPKENEISFPPEALRSEMVVMDVVYTPLRTRLLEAAEQK 227
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G T + GL MFI QA Q+E +TG+
Sbjct: 228 GCTTIDGLSMFIAQAAAQFELWTGI 252
>gi|300118673|ref|ZP_07056401.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
gi|298723922|gb|EFI64636.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
Length = 277
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 164/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGDPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L + +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|49481393|ref|YP_038388.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196039231|ref|ZP_03106537.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
gi|81696659|sp|Q6HDI8.1|AROE_BACHK RecName: Full=Shikimate dehydrogenase
gi|49332949|gb|AAT63595.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196029858|gb|EDX68459.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
Length = 277
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|329925883|ref|ZP_08280593.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
gi|328939534|gb|EGG35883.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
Length = 286
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 149/282 (52%), Gaps = 26/282 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
D + G++G P+GHSKSP +++ A ++G +G +V H+ + Q + F G +
Sbjct: 8 DYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKALGFRGVN 67
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK +K D VD A+ IGAVN I+ +GKL GYNTD +G + +++D
Sbjct: 68 VTIPHKVEVMKYLDVVDEGAQRIGAVNTIV--NDNGKLTGYNTDGIGYVRSLKDE----- 120
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA 428
L GK VVIGAGGA + + Y +G ++ I NRT +A LAE
Sbjct: 121 -----ACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALALAEEWS--- 172
Query: 429 LSLADLENFNPEDGM-------ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
SLADL + ED ++ NTTS+GM P++ E PIP ++ +V D +Y P
Sbjct: 173 -SLADLRGYGEEDAGEALSDADVIINTTSVGMFPRISELPIPPESIREGIVVSDLIYNPL 231
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T LLR+ E TI GL MFI Q +E +TGL + A
Sbjct: 232 KTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQA 273
>gi|301055826|ref|YP_003794037.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|423549924|ref|ZP_17526251.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
gi|300377995|gb|ADK06899.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|401189540|gb|EJQ96590.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
Length = 277
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLREKRILLLGAGGASRAIYFSLVDAGVKEIAVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|218905471|ref|YP_002453305.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228929379|ref|ZP_04092402.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123873|ref|ZP_04253066.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|226724114|sp|B7JNW6.1|AROE_BACC0 RecName: Full=Shikimate dehydrogenase
gi|218536842|gb|ACK89240.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228659587|gb|EEL15234.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|228830285|gb|EEM75899.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|165873244|ref|ZP_02217854.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227817111|ref|YP_002817120.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CDC 684]
gi|254750915|ref|ZP_05202954.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Vollum]
gi|254806730|sp|C3L5T8.1|AROE_BACAC RecName: Full=Shikimate dehydrogenase
gi|164711003|gb|EDR16570.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227006413|gb|ACP16156.1| shikimate dehydrogenase [Bacillus anthracis str. CDC 684]
Length = 277
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229093404|ref|ZP_04224509.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
gi|228689998|gb|EEL43801.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
Length = 277
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMGAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L + +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|30264406|ref|NP_846783.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Ames]
gi|47529857|ref|YP_021206.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|65321706|ref|ZP_00394665.1| COG0169: Shikimate 5-dehydrogenase [Bacillus anthracis str. A2012]
gi|170707392|ref|ZP_02897846.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229603912|ref|YP_002868624.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0248]
gi|30259064|gb|AAP28269.1| shikimate dehydrogenase [Bacillus anthracis str. Ames]
gi|47505005|gb|AAT33681.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|170127636|gb|EDS96509.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229268320|gb|ACQ49957.1| shikimate dehydrogenase [Bacillus anthracis str. A0248]
Length = 308
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|49187228|ref|YP_030480.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167634541|ref|ZP_02392861.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|167638665|ref|ZP_02396941.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|170687435|ref|ZP_02878652.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|177653290|ref|ZP_02935542.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190566996|ref|ZP_03019912.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034558|ref|ZP_03101967.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228948048|ref|ZP_04110333.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|254684091|ref|ZP_05147951.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CNEVA-9066]
gi|254721925|ref|ZP_05183714.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A1055]
gi|254736439|ref|ZP_05194145.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Western North
America USA6153]
gi|254741476|ref|ZP_05199163.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Kruger B]
gi|254757757|ref|ZP_05209784.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Australia 94]
gi|421506588|ref|ZP_15953511.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|421638409|ref|ZP_16079005.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
gi|49181155|gb|AAT56531.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167513513|gb|EDR88883.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|167529993|gb|EDR92728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|170668630|gb|EDT19376.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|172081572|gb|EDT66644.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190561987|gb|EDV15956.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993100|gb|EDX57059.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228811634|gb|EEM57970.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|401823581|gb|EJT22728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|403394835|gb|EJY92075.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
Length = 277
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423406241|ref|ZP_17383390.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
gi|401660235|gb|EJS77717.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
Length = 277
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 158/269 (58%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ V
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------AV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S S L GK +++GAGGA +A+ + G + +ANRT D+A+EL + S
Sbjct: 114 S---SEPLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTANVNS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+A LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P TR+L
Sbjct: 171 VALSLEKATEEQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFETRILC 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 231 EAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|334137627|ref|ZP_08511056.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
gi|333604791|gb|EGL16176.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
Length = 289
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 154/277 (55%), Gaps = 26/277 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T ++G+ G PV HS+SPI+ N AF G NG + H+L + + + + F G +
Sbjct: 11 TILYGVFGDPVRHSRSPIMMNRAFGEAGINGAYAAFHVLPEQLEEAVAGIRALGFGGVNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK +K DE+D A+++GAVN ++ R GKL GYNTD +G + ++ E G+
Sbjct: 71 TIPHKVNVMKYLDEIDADAQALGAVNTVVNR--GGKLIGYNTDGIGYVRSLKEETGMD-- 126
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH 427
L GK ++IGAGGA + ++Y +G + IANRT ++A+ELA TV
Sbjct: 127 ----------LRGKKVLLIGAGGAARGISYALAKEGPSFIAIANRTAEKAQELASTVRAE 176
Query: 428 ----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP--KHALGHYALVFDAVYTPK 481
+ L +L N + +I+ N+TS GM P ++E P+ H L A+V D VY P
Sbjct: 177 TSAVGMGLHELGNIISDADLII-NSTSSGMYPNIEEMPLDLDGHRLREGAVVSDLVYNPL 235
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
TR L+EA+ GA GL MFI Q +E +TG+P
Sbjct: 236 ETRFLKEAKARGAVTHGGLGMFIYQGAYAFEYWTGVP 272
>gi|423395366|ref|ZP_17372567.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
gi|401654777|gb|EJS72316.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
Length = 277
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 162/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ V
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------AV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L GK +++GAGGA +A+ + G + +ANRT D+A+EL A T ++
Sbjct: 114 S---SEPLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTANDNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P TR+L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFETRIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423527807|ref|ZP_17504252.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
gi|402451470|gb|EJV83289.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
Length = 277
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---NEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229157949|ref|ZP_04286021.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228625509|gb|EEK82264.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 277
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 161/274 (58%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G R + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHS 170
Query: 427 HALSLA----DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V TP+ +L +V D +Y P
Sbjct: 171 VALSLEKATEEQENYD-----IIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|332298817|ref|YP_004440739.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
gi|332181920|gb|AEE17608.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
Length = 501
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 228/484 (47%), Gaps = 37/484 (7%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
D+ E+R+D L+ + R I+ + +P + T R +GGQ+ E R + +
Sbjct: 34 DMAELRVDYLEK-DERLQIRHFPAMAGLPCILTIRRKIDGGQFLEGEASRTMLFARGLAF 92
Query: 111 GAD-------YIDVELQV-AREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARI 162
YID E D+ + ++I S+H+ + V ++ +A++
Sbjct: 93 AEQDTRKNFAYIDFEEDFHVPSLQDAALAFE---TRIIRSAHDMEN--PVYNICERLAKM 147
Query: 163 QASGADIVKFATTALDITDVARVF-QITVHSQVPIIGLVMGERGLISRILCAKFGGFLTF 221
+ +G +I K A ++DV +F + + I MG GL SRIL + FLT+
Sbjct: 148 RTTGFEIPKLACMPHSLSDVTHMFAEAASLADSEHILCAMGPLGLPSRILAGRLHSFLTY 207
Query: 222 GTLE--NGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
+ + G + G L ++YNFR + +TK++GI G P+ + SP ++NE ++
Sbjct: 208 TSPKEPTGGMQQIGHIDPVTLNEIYNFRAIDANTKLYGITGYPLAATDSPRIHNEGYRKH 267
Query: 280 GFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII 339
G N +V + +++ + + G S TIPHKE ++ +V I A N I+
Sbjct: 268 GMNAAYVPVRAATVSEALEFAAETGIQGLSVTIPHKEKVLEYLPQVSAEVGEIDACNTIV 327
Query: 340 RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG 399
R +SD FGYNTD G A+ D +NV LA +IG+GGA KA A+
Sbjct: 328 RTESD--WFGYNTDAYGLSRAVCDF----MNVKN-----LAHCKVAIIGSGGAAKAAAFA 376
Query: 400 AKAKGARVVIANRTYDRARELAETVGGHALSL----AD-LENFNPEDGMILANTTSIGMQ 454
K + I NRT +A+++AE L AD LE ++ D +I +G
Sbjct: 377 VKQLRGKACIFNRTVSKAKQIAENFNFKWAPLGPESADLLEKYS--DLIIQTTPKGMGAA 434
Query: 455 PKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYE 512
P E PI + Y V+D VY P+IT ++ A+ +G + +G M QAY+Q+E
Sbjct: 435 PPATEQNDPIFFYDFKGYEAVYDVVYVPEITPVMARAKAAGCKVSNGHTMLEYQAYKQFE 494
Query: 513 RFTG 516
FTG
Sbjct: 495 LFTG 498
>gi|402555531|ref|YP_006596802.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
gi|401796741|gb|AFQ10600.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 158/269 (58%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL S
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+A LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILC 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 231 EAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|42783461|ref|NP_980708.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
gi|81699667|sp|Q730K1.1|AROE_BACC1 RecName: Full=Shikimate dehydrogenase
gi|42739390|gb|AAS43316.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 158/269 (58%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL S
Sbjct: 114 S---SKPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+A LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILC 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 231 EAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|383791883|ref|YP_005476457.1| shikimate 5-dehydrogenase [Spirochaeta africana DSM 8902]
gi|383108417|gb|AFG38750.1| shikimate 5-dehydrogenase [Spirochaeta africana DSM 8902]
Length = 509
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 202/422 (47%), Gaps = 40/422 (9%)
Query: 114 YIDVELQVAREFNDS--IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVK 171
++D+E++ + +DS + + ++I S H ++ P + D+ L A Q + K
Sbjct: 93 WLDLEIEQLNQPDDSRLVTAAQAAGVRLIRSCHAFE--PGL-DMQRLQALEQIPADQLAK 149
Query: 172 FATTALDITDVARVFQITVHSQVPIIGLV--MGERGLISRILCAKFGGFLTFGTLENGIV 229
A D+ ++ Q S P ++ MGE G+ SRI FG T+
Sbjct: 150 AAVMPGSTADLLQLLQFA-RSFRPGFQVILGMGEWGIPSRICPRVFGSCWTYAAETARSA 208
Query: 230 SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL 289
+APGQ +L Y PDT+ F I G PV HSKSP +NE F G + ++
Sbjct: 209 AAPGQLGAAELARKYRTHLHHPDTRYFAIFGNPVMHSKSPEFHNERFAEAGKDAAYIPFP 268
Query: 290 VDDIAKFFQTYSSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDGKL 347
+ D Q G S TIPHK A+ + + V V +++GA N + +L
Sbjct: 269 LSDATLGEQVIRQWPLQGVSITIPHKHGALGWESAEPVPAV-QAVGAANTAVVAGHGIEL 327
Query: 348 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV 407
NTD G + +++ RG LN L G +VIGAGGA +A+ YG + GA+V
Sbjct: 328 L--NTDVEGFLHPLQE--RG-LN--------LRGMHCLVIGAGGAARAIVYGLLSSGAQV 374
Query: 408 VIANRTYDRARELA----ETVGGHALSLADL-----------ENFNPEDGMILANTTSIG 452
++ NRT RA +LA +TV + A+L E + + G+I+ TT +G
Sbjct: 375 LVLNRTASRADDLAAAMMQTVPHSTVLAAELPSDGDVRRVCAECWGQDPGLIV-QTTQVG 433
Query: 453 MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYE 512
M+P +D PI + LV+D +YTP+ T LLR A +G +++G MFI QA Q
Sbjct: 434 MEPAIDADPISGYRFSGDELVYDIIYTPEHTALLRRAAGAGCPVITGRMMFIAQAEAQSR 493
Query: 513 RF 514
RF
Sbjct: 494 RF 495
>gi|118479500|ref|YP_896651.1| shikimate 5-dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196044711|ref|ZP_03111945.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|229186574|ref|ZP_04313735.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|376268232|ref|YP_005120944.1| shikimate 5-dehydrogenase [Bacillus cereus F837/76]
gi|166219218|sp|A0RIV1.1|AROE_BACAH RecName: Full=Shikimate dehydrogenase
gi|118418725|gb|ABK87144.1| shikimate dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196024199|gb|EDX62872.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|228596833|gb|EEK54492.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|364514032|gb|AEW57431.1| Shikimate 5-dehydrogenase I alpha [Bacillus cereus F837/76]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + +GKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229198462|ref|ZP_04325166.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|423573986|ref|ZP_17550105.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|423604016|ref|ZP_17579909.1| shikimate dehydrogenase [Bacillus cereus VD102]
gi|228584965|gb|EEK43079.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|401212555|gb|EJR19298.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|401245702|gb|EJR52055.1| shikimate dehydrogenase [Bacillus cereus VD102]
Length = 277
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAYYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATVHS 170
Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P
Sbjct: 171 VALSLEEATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|52141171|ref|YP_085659.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
gi|81686158|sp|Q634K8.1|AROE_BACCZ RecName: Full=Shikimate dehydrogenase
gi|51974640|gb|AAU16190.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
Length = 277
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---NEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423385836|ref|ZP_17363092.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
gi|401635892|gb|EJS53647.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
Length = 277
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 164/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---NEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQMCLLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|206976069|ref|ZP_03236979.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217961824|ref|YP_002340394.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|222097779|ref|YP_002531836.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|229141072|ref|ZP_04269614.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|375286341|ref|YP_005106780.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|423354827|ref|ZP_17332452.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|423373787|ref|ZP_17351126.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|423570574|ref|ZP_17546819.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
gi|226726289|sp|B7HPN3.1|AROE_BACC7 RecName: Full=Shikimate dehydrogenase
gi|254806732|sp|B9IYA1.1|AROE_BACCQ RecName: Full=Shikimate dehydrogenase
gi|206745821|gb|EDZ57218.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217067575|gb|ACJ81825.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|221241837|gb|ACM14547.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|228642350|gb|EEK98639.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|358354868|dbj|BAL20040.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|401085831|gb|EJP94065.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|401095188|gb|EJQ03248.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|401203770|gb|EJR10605.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
Length = 277
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATVHS 170
Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P
Sbjct: 171 VALSLEEATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|229163283|ref|ZP_04291237.1| Shikimate dehydrogenase [Bacillus cereus R309803]
gi|228620190|gb|EEK77062.1| Shikimate dehydrogenase [Bacillus cereus R309803]
Length = 277
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 158/269 (58%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLAMQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S S L GK +++GAGGA +A+ + G + + +ANRT D+A EL H S
Sbjct: 114 S---SEPLQGKRILLLGAGGASRAIYFSLADIGVKEIDVANRTVDKAEELIAACKAHVTS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+A LE E I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALSLEKATEEQENYDIIIQTTTIGMHPYVEHTPLQICSLKKGTIVSDIIYNPFETKILC 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 231 EAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|146416639|ref|XP_001484289.1| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 248/507 (48%), Gaps = 48/507 (9%)
Query: 39 VVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDG 95
V D +A +G D VE+R+D L++++ E + K +P +FT R + +GG+
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 96 DENERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN--YQYTPSV 152
++ E ++ L L A++LG Y+D++L + D I K+I S H+ +++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSAN-VFTKIIASFHDPKREFSWKE 828
Query: 153 EDLSNLVARIQASGADIVKFATTAL---DITDVARVFQITVHSQVPIIGLVMGERGLISR 209
+ N + GADIVK +A D D+ Q+ H+ P+I + MGE+G +SR
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQLVQDNIDLESFRQL--HTSRPLIAINMGEQGKLSR 886
Query: 210 ILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKS 268
+L +T TL +APGQ T+ ++ + N Q+G K F +IGKP+ HS+S
Sbjct: 887 VLNPVLTP-VTSDTLTEK--AAPGQLTVSEINGIAN--QIGLLSAKSFWVIGKPIQHSRS 941
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
P L+N +K +G F DD K F+ +DF G + T+P K +K DE+
Sbjct: 942 PPLHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSE 1001
Query: 328 VAKSIGAVN--CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
AK+IGAVN C++++ + G NTD+VG ++ + G SS G +
Sbjct: 1002 AAKTIGAVNTVCLVKKDNHQIFVGDNTDWVGISNSF-----AKFGAYG--SSTQCG---L 1051
Query: 386 VIGAGGAGKALAYGAKAKGA-RVVIANRT----YDRARELAETVGGHALSLADLENFNPE 440
V+G GG +A + G ++ + NRT +D + L E G L +L N
Sbjct: 1052 VVGGGGTSRAAVFALHQMGCKKIYMINRTASKVHDIKKSLPEEYGIEVLDSEELVNL--A 1109
Query: 441 DGMILANTTSIGMQP------KVDETPIPK---HALGHYALVFDAVYTPKITRLLREAEE 491
+ + LA + +P K ET + K ++ G + +A Y P++T ++ A++
Sbjct: 1110 EPVTLAVSCIPADKPIEAQLLKYLETLLAKGSENSHGVTPTLLEAAYKPRVTPIMELAQD 1169
Query: 492 S-GATIVSGLEMFIGQAYEQYERFTGL 517
T+V G+EM + Q Q+E TG
Sbjct: 1170 KFKWTVVPGVEMLVHQGERQFELHTGF 1196
>gi|228935655|ref|ZP_04098469.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824015|gb|EEM69833.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 162/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|163942090|ref|YP_001646974.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
gi|226697482|sp|A9VHW1.1|AROE_BACWK RecName: Full=Shikimate dehydrogenase
gi|163864287|gb|ABY45346.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
Length = 277
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 160/271 (59%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + ++ LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A+ L E V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|384182154|ref|YP_005567916.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328238|gb|ADY23498.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 277
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHS 170
Query: 427 HALSLA----DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P
Sbjct: 171 VALSLEKATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|47569330|ref|ZP_00240014.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
gi|47554001|gb|EAL12368.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
Length = 277
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 161/274 (58%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G R + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHS 170
Query: 427 HALSLA----DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V TP+ +L +V D +Y P
Sbjct: 171 VALSLEKATEEQENYD-----IIIQTTTIGMHPRVQYTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|225866315|ref|YP_002751693.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB102]
gi|254806731|sp|C1ESM8.1|AROE_BACC3 RecName: Full=Shikimate dehydrogenase
gi|225789755|gb|ACO29972.1| shikimate dehydrogenase [Bacillus cereus 03BB102]
Length = 277
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + +GKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228923087|ref|ZP_04086379.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423634842|ref|ZP_17610495.1| shikimate dehydrogenase [Bacillus cereus VD156]
gi|228836585|gb|EEM81934.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401278828|gb|EJR84758.1| shikimate dehydrogenase [Bacillus cereus VD156]
Length = 277
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 170/288 (59%), Gaps = 25/288 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV +++ + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + GKL GYNTD +G + A++ +V
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQ-------SV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VPLS-LEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLL 534
EA+E GA I +G++MF+ Q +E +TG AP++ + L++
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG-----RAPNIERMKQLVI 272
>gi|403216777|emb|CCK71273.1| hypothetical protein KNAG_0G02160 [Kazachstania naganishii CBS 8797]
Length = 1588
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 237/496 (47%), Gaps = 47/496 (9%)
Query: 47 ASGADLVEIRLDGL----KNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVD 102
A G D VE+R+D L +F R+ +P +FT R +GG++D D+ E ++
Sbjct: 1097 AYGCDAVEVRVDHLVKLDADFVNRQLFTLRSATGGLPIIFTVRTKKQGGKFDDDDYETLE 1156
Query: 103 VL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLV 159
L LA++ G ++ID+EL + + K KVI S H++ + S + N
Sbjct: 1157 QLFSLALKAGVEFIDLELTLPTAIQYKVLNNK-GNTKVIGSHHDFDAAFPWSNSEWENRY 1215
Query: 160 ARIQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
+ + DIVKF TA+ D + F+ + H+ P+I + MGE G +SR+L
Sbjct: 1216 NQALSLDVDIVKFVGTAVTFEDNLELERFRFS-HTIKPLIAINMGEIGKVSRVLNTILTP 1274
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAF 276
+T L +APGQ T+ ++ +Y MG T K ++GKP+ HS+SP L+N +
Sbjct: 1275 -ITSSLLPGS--AAPGQLTLPEINKIYT--SMGGITPKELFVVGKPIEHSRSPTLHNTGY 1329
Query: 277 KSVGFNGVFVHLLVDDIAKFFQTY--SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
K +G F D + + + + G + TIP K +K D++ A+ IGA
Sbjct: 1330 KLLGLPHTFGKFETDSAEEVKKQLLDGNKNLGGLAVTIPLKLDIIKYMDDLTPAAEIIGA 1389
Query: 335 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
VN +I DGK G NTD++G +++ +S GV + ++G +V+GAGGA +
Sbjct: 1390 VNTVIPL-GDGKFRGDNTDWLGITNSL---------ISNGVPANVSGMCGLVVGAGGASR 1439
Query: 395 ALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453
A Y G A++ + NR D + L + H +L +E D ++ + I
Sbjct: 1440 AAVYALFKMGCAKIYVINRCSDEMQALKASFPVH-FNLVLVETVEEADQVVDTVSMVISC 1498
Query: 454 QPKVDETPIPKH---------ALGHYA----LVFDAVYTPKITRLLREAEES-GATIVSG 499
P P+P + A G A + DA Y P IT L++ A + +V G
Sbjct: 1499 VPA--NKPLPDNLVSKVERFLAKGAKASFVPTLLDAAYKPSITPLMKLASDKYQWHVVPG 1556
Query: 500 LEMFIGQAYEQYERFT 515
+M + Q EQ+ER+T
Sbjct: 1557 AQMLVHQGVEQFERWT 1572
>gi|302309374|ref|NP_986731.2| AGR066Wp [Ashbya gossypii ATCC 10895]
gi|327507749|sp|Q74ZZ1.2|ARO1_ASHGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|299788329|gb|AAS54555.2| AGR066Wp [Ashbya gossypii ATCC 10895]
Length = 1577
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 253/521 (48%), Gaps = 46/521 (8%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANAS--GADLVEIRLDGLKNFNPRENIKTL----IK 74
K T +C+ + ++ +M + + G + VE+R+D L+N++ +K L +
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 75 ESPVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKK 133
+P +FT R +GG++ D D + D+L + ++ G +++D+EL + + I K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 134 PEKCKVIVSSHNY--QYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI-TV 190
K ++I S H++ +++ + + A+ A D +KF TA D + + +
Sbjct: 1180 -YKTRIIGSHHDFSGEFSWEHPEWEHRYAQALAMQVDAIKFVATAKGFGDNLSLEEFRSK 1238
Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMG 250
H+ P+I + M E G +SR+L +T L +APGQ T++ + +LY
Sbjct: 1239 HTDKPLIAINMRECGKLSRVLNTILTP-ITSDVLPQA--AAPGQLTLRQINELYASIGGL 1295
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFS 309
K+F ++G P+GHS+SPIL+N + S+G F D ++ S D G +
Sbjct: 1296 RPKKMF-VVGSPIGHSRSPILHNTGYNSLGLPYTFDKFETDSAEIVKKSLLSREDLGGIA 1354
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
TIP K+ ++ DE+ AK IGAVN II ++ DG+ G+NTD++G S I +G+
Sbjct: 1355 VTIPLKQDIMQYLDELTDSAKCIGAVNTIIPKK-DGRFIGHNTDWLGIKNSLIANGVPEH 1413
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG- 426
+N +G +++G+GG +A AY + + + + + NRT EL ++
Sbjct: 1414 VNTAG-----------LIVGSGGTARAAAYAFHEMQCSTIYMINRTTSNLTELQKSFPQE 1462
Query: 427 ---HAL-SLADLENFNPEDGMILANTTS-----IGMQPKVDETPIPKHALGHYALVFDAV 477
H + SL +E + G+ ++ S + K+ A + DA
Sbjct: 1463 FNIHVIESLEQIEQLSEPVGIAVSCVPSDKPLDDALSQKLSAFLSRPSATNFIPTILDAA 1522
Query: 478 YTPKITRLLREAEE-SGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T +L+ A E G VSG +M + Q Q+E +TG
Sbjct: 1523 YKPLVTPVLKLASEVHGWRPVSGAQMLVHQGVAQFEIWTGF 1563
>gi|423400819|ref|ZP_17377992.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|423478476|ref|ZP_17455191.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
gi|401653809|gb|EJS71352.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|402428638|gb|EJV60735.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
Length = 277
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 160/272 (58%), Gaps = 24/272 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ +DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKKIGAVNTVV--HNDGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVNS 170
Query: 427 HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
ALSL E E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T+
Sbjct: 171 VALSL---EKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|374109982|gb|AEY98887.1| FAGR066Wp [Ashbya gossypii FDAG1]
Length = 1577
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 253/521 (48%), Gaps = 46/521 (8%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANAS--GADLVEIRLDGLKNFNPRENIKTL----IK 74
K T +C+ + ++ +M + + G + VE+R+D L+N++ +K L +
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 75 ESPVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKK 133
+P +FT R +GG++ D D + D+L + ++ G +++D+EL + + I K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 134 PEKCKVIVSSHNY--QYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI-TV 190
K ++I S H++ +++ + + A+ A D +KF TA D + + +
Sbjct: 1180 -YKTRIIGSHHDFSGEFSWEHPEWEHRYAQALAMQVDAIKFVATAKGFGDNLSLEEFRSK 1238
Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMG 250
H+ P+I + M E G +SR+L +T L +APGQ T++ + +LY
Sbjct: 1239 HTDKPLIAINMRECGKLSRVLNTILTP-ITSDVLPQA--AAPGQLTLRQINELYASIGGL 1295
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFS 309
K+F ++G P+GHS+SPIL+N + S+G F D ++ S D G +
Sbjct: 1296 RPKKMF-VVGSPIGHSRSPILHNTGYNSLGLPYTFDKFETDSAEIVKKSLLSREDLGGIA 1354
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
TIP K+ ++ DE+ AK IGAVN II ++ DG+ G+NTD++G S I +G+
Sbjct: 1355 VTIPLKQDIMQYLDELTDSAKCIGAVNTIIPKK-DGRFIGHNTDWLGIKNSLIANGVPEH 1413
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG- 426
+N +G +++G+GG +A AY + + + + + NRT EL ++
Sbjct: 1414 VNTAG-----------LIVGSGGTARAAAYAFHEMQCSTIYMINRTTSNLTELQKSFPQE 1462
Query: 427 ---HAL-SLADLENFNPEDGMILANTTS-----IGMQPKVDETPIPKHALGHYALVFDAV 477
H + SL +E + G+ ++ S + K+ A + DA
Sbjct: 1463 FNIHVIESLEQIEQLSEPVGIAVSCVPSDKPLDDALSQKLSAFLSRPSATNFIPTILDAA 1522
Query: 478 YTPKITRLLREAEE-SGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T +L+ A E G VSG +M + Q Q+E +TG
Sbjct: 1523 YKPLVTPVLKLASEVHGWRPVSGAQMLVHQGVAQFEIWTGF 1563
>gi|320352426|ref|YP_004193765.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
gi|320120928|gb|ADW16474.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 152/276 (55%), Gaps = 22/276 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T++FGIIG PV HS SP ++N AF +G NGV++ + D+ F+ S F G S T+
Sbjct: 6 TQLFGIIGNPVEHSLSPAMHNAAFAHLGLNGVYIPMRPADLGDGFRGLKSLGFVGVSVTV 65
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCII-RRQSDG--KLFGYNTDYVGAISAIEDGLRGRL 369
P K A + DEVD VA+ IGAVN ++ RR DG + GYNTD++G+ A+ + L
Sbjct: 66 PFKVAVMDYIDEVDPVARKIGAVNTLLFRRDQDGQNRCLGYNTDWLGSNQALAEALD--- 122
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
LA ++IGAGGA +A+ +G GARV++ NRT + R+LA + L
Sbjct: 123 ---------LATSTVLIIGAGGAARAVGFGLIEAGARVLVTNRTESKGRDLARQLNCPFL 173
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
S +L + L NTTS+GM PK + PI L + +V D VY P TRLL EA
Sbjct: 174 SAHELPTAQAD---ALINTTSVGMAPKKEAVPIDPALLARFPVVMDIVYAPLSTRLLVEA 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
++ G + GL+M Q Q+ +TG APH
Sbjct: 231 KQRGCRTIDGLKMLQYQGAAQFILWTG----REAPH 262
>gi|190347323|gb|EDK39572.2| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 246/505 (48%), Gaps = 44/505 (8%)
Query: 39 VVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDG 95
V D +A +G D VE+R+D L++++ E + K +P +FT R + +GG+
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 96 DENERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN--YQYTPSV 152
++ E ++ L L A++LG Y+D++L + D I K+I S H+ +++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSAN-VFTKIIASFHDPKREFSWKE 828
Query: 153 EDLSNLVARIQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRIL 211
+ N + GADIVK +A + D + +H+ P+I + MGE+G +SR+L
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQSVQDNIDLESFRQLHTSRPLIAINMGEQGKLSRVL 888
Query: 212 CAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
+T TL +APGQ T+ ++ + N Q+G K F +IGKP+ HS+SP
Sbjct: 889 NPVLTP-VTSDTLTEK--AAPGQLTVSEINGIAN--QIGLLSAKSFWVIGKPIQHSRSPP 943
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
L+N +K +G F DD K F+ +DF G + T+P K +K DE+ A
Sbjct: 944 LHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSEAA 1003
Query: 330 KSIGAVN--CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 387
K+IGAVN C +++ + G NTD+VG ++ + G SS G +V+
Sbjct: 1004 KTIGAVNTVCSVKKDNHQIFVGDNTDWVGISNSF-----AKFGAYG--SSTQCG---LVV 1053
Query: 388 GAGGAGKALAYGAKAKGA-RVVIANRT----YDRARELAETVGGHALSLADLENFNPEDG 442
G GG +A + G ++ + NRT +D + L E G L +L N +
Sbjct: 1054 GGGGTSRAAVFALHQMGCKKIYMINRTASKVHDIKKSLPEEYGIEVLDSEEL--VNSAEP 1111
Query: 443 MILANTTSIGMQP------KVDETPIPK---HALGHYALVFDAVYTPKITRLLREAEES- 492
+ LA + +P K ET + K ++ G + +A Y P++T ++ A++
Sbjct: 1112 VTLAVSCIPADKPIEAQLLKYLETLLAKGSENSHGVTPTLLEAAYKPRVTPIMELAQDKF 1171
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
T+V G+EM + Q Q+E TG
Sbjct: 1172 KWTVVPGVEMLVHQGERQFELHTGF 1196
>gi|30022412|ref|NP_834043.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206969455|ref|ZP_03230409.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218234390|ref|YP_002369144.1| shikimate 5-dehydrogenase [Bacillus cereus B4264]
gi|228960604|ref|ZP_04122251.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048041|ref|ZP_04193616.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|229111808|ref|ZP_04241354.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|229129615|ref|ZP_04258583.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229146906|ref|ZP_04275270.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|229152538|ref|ZP_04280728.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|229180612|ref|ZP_04307953.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|296504827|ref|YP_003666527.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|365158876|ref|ZP_09355066.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411869|ref|ZP_17388989.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|423432345|ref|ZP_17409349.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|423631057|ref|ZP_17606804.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|423640585|ref|ZP_17616203.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|423657290|ref|ZP_17632589.1| shikimate dehydrogenase [Bacillus cereus VD200]
gi|81580465|sp|Q818D0.1|AROE_BACCR RecName: Full=Shikimate dehydrogenase
gi|226724116|sp|B7HCW1.1|AROE_BACC4 RecName: Full=Shikimate dehydrogenase
gi|29897970|gb|AAP11244.1| Shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206735143|gb|EDZ52311.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218162347|gb|ACK62339.1| shikimate dehydrogenase [Bacillus cereus B4264]
gi|228602855|gb|EEK60335.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|228630904|gb|EEK87543.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|228636505|gb|EEK92971.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228653732|gb|EEL09602.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228671564|gb|EEL26862.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|228723285|gb|EEL74655.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|228799083|gb|EEM46053.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296325879|gb|ADH08807.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|363626246|gb|EHL77243.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103937|gb|EJQ11914.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|401117101|gb|EJQ24939.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|401264424|gb|EJR70536.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|401279646|gb|EJR85568.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|401290033|gb|EJR95737.1| shikimate dehydrogenase [Bacillus cereus VD200]
Length = 277
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229175009|ref|ZP_04302528.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|423457417|ref|ZP_17434214.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
gi|228608470|gb|EEK65773.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|401147801|gb|EJQ55294.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
Length = 277
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 160/272 (58%), Gaps = 24/272 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTADKAKELIAACTATVNS 170
Query: 427 HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
ALSL E E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T+
Sbjct: 171 VALSL---EKATEEQGNYDIIIQTTTIGMHPRVEYTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|325191388|emb|CCA26166.1| unnamed protein product [Albugo laibachii Nc14]
Length = 1594
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 237/496 (47%), Gaps = 48/496 (9%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G D VE+R+D LK+ P + L + +P +FT R +GGQ+ D E E D+L
Sbjct: 1082 GVDAVELRVDLLKSTEPAFVSSQVALLRNITSLPIIFTVRSEAQGGQFPDDQEEEMFDLL 1141
Query: 105 RLAMELGADYIDVELQVAREFNDS-IRGKKPEKCKVIVSSHNYQYTPSV--EDLSNLVAR 161
LA+ L +++D+E+ + + IR +K + +I S H Q + ED+ +
Sbjct: 1142 HLAVRLACEFVDMEVCWSHSYRTEFIRYRK--RSAIIGSFHALQMDAPMNEEDIVAIFKS 1199
Query: 162 IQASG-ADIVKFATTALDITDVARVFQITVH------SQVPIIGLVMGERGLISRILCAK 214
SG +VK A + D V QI + +P+I L E+G +SR+L +
Sbjct: 1200 AYHSGDVQVVKVVVKAFGVNDALLVHQIAQNCLNEWDQCLPVIALCTTEQGRLSRVLNSI 1259
Query: 215 FGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
+T L +APGQ ++K++LDL + M P + F + G PV S SP ++N
Sbjct: 1260 LTP-VTHAKLPKA--AAPGQLSVKEILDLRSALGMFP-ARRFYLFGSPVSKSPSPAIHNA 1315
Query: 275 AFKS--VGFNGVFVHLL-VDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS 331
F++ + F L +++I + + +S F G S TIPHK + DE+ A++
Sbjct: 1316 GFQAHNLPFQYQLCETLDLEEITRKIRDTTS--FGGASVTIPHKIDIMHLLDEISPAARA 1373
Query: 332 IGAVNCIIR--RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL-FVVIG 388
IGAVN I+R R + L G NTD++G + I L + LA +L +VIG
Sbjct: 1374 IGAVNTILREDRVTGAHLKGDNTDWIGILRPIARRLHAQ------TRPKLASELRALVIG 1427
Query: 389 AGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILAN 447
AGG A AY G + I NRT+++AR +AE G A+ LA+L + I+
Sbjct: 1428 AGGTSMAAAYAMCQLGVGSLYIYNRTFEKARLIAERFG--AIPLAELTEVSIPFADII-- 1483
Query: 448 TTSIGMQPKVDETPIPKHAL--GHYALVFDAVY----TPKITRLLREAEESGATIVSGLE 501
IG P +P + + H +V DA Y TP + LL ++ G E
Sbjct: 1484 ---IGTIPAASGFVLPSYLMQSDHGMIVLDAAYNPPRTPMLEALLSTKSPRQHAVIYGYE 1540
Query: 502 MFIGQAYEQYERFTGL 517
M QAY QY+ + L
Sbjct: 1541 MLCEQAYAQYQSWHKL 1556
>gi|423585186|ref|ZP_17561273.1| shikimate dehydrogenase [Bacillus cereus VD045]
gi|401233829|gb|EJR40315.1| shikimate dehydrogenase [Bacillus cereus VD045]
Length = 277
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|254571247|ref|XP_002492733.1| Pentafunctional arom protein [Komagataella pastoris GS115]
gi|327507688|sp|C4R4R8.1|ARO1_PICPG RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238032531|emb|CAY70554.1| Pentafunctional arom protein [Komagataella pastoris GS115]
gi|328353259|emb|CCA39657.1| shikimate 5-dehydrogenase [Komagataella pastoris CBS 7435]
Length = 1545
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 243/488 (49%), Gaps = 37/488 (7%)
Query: 48 SGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVD-V 103
+G D VE+R+D LK + I L ++ VP LFT R +GG++ D E ++ +
Sbjct: 1067 NGCDAVELRVDLLKQHDSHFISNQIGILRNQTSVPILFTIRTKSQGGRFPDDSYEDIERL 1126
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVAR 161
L LA++LG +Y+D+EL + DS+ K+ + K+I S H++ T ++ N
Sbjct: 1127 LNLAIKLGVEYVDLELSLPESLLDSVASKR-QFTKIIGSHHDFSGTVKWNNVEWENKYLL 1185
Query: 162 IQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
DI+KF TA + D + ++H+ P IG+ MG G +SR+ F LT
Sbjct: 1186 ALKLNVDIIKFVGTATSLNDNWELEHFRSLHTDKPFIGINMGPLGKVSRV----FNTILT 1241
Query: 221 FGTLENGIVSA-PGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAFKS 278
T ++ SA PGQ T+K++ + F Q G + K F I+GKP+ HSKSP L+ +
Sbjct: 1242 PVTHKDLPSSAAPGQLTLKEINEY--FGQFGGSSRKKFYIVGKPISHSKSPELHKTFYDE 1299
Query: 279 VGFNGVFVHLLVDDIAKFFQ--TYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
G + F DD AK F +++ G + TIP K +K +E+ AKSIGA+N
Sbjct: 1300 FGLSHTFDKFETDDAAKVFNDLVKGNDELGGCAVTIPLKIDMLKYVNELTDSAKSIGALN 1359
Query: 337 CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKAL 396
II DG+ G NTD++G I D L G A + +V+G GG +A
Sbjct: 1360 TII-PIGDGRFIGDNTDWIG----IRDSLH-----QAGCEIAPESSVGLVVGGGGTSRAA 1409
Query: 397 AYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD-LENFNPEDGMILANTTSIGM 453
Y G +++ + NRT + E+ + + + D L+ + +D + A +T G
Sbjct: 1410 VYALHQMGCSKIYMLNRTPSKLSEIKNHFPSNYNIHIVDSLDAIDEDDKLDAAVSTVPGD 1469
Query: 454 QPKVDE-----TPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAY 508
+P D+ + + GH A++ +A Y P+ T ++ A G +V G +M + Q
Sbjct: 1470 KPLDDQLISLLKKLLEKKRGH-AVLLEAAYKPRETPIMALAFSRGWKVVPGSKMLVNQGI 1528
Query: 509 EQYERFTG 516
EQ+ ++TG
Sbjct: 1529 EQFYKWTG 1536
>gi|57117457|gb|AAW33954.1| AROM pentafunctional enzyme, partial [Komagataella pastoris]
Length = 1539
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 243/488 (49%), Gaps = 37/488 (7%)
Query: 48 SGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVD-V 103
+G D VE+R+D LK + I L ++ VP LFT R +GG++ D E ++ +
Sbjct: 1061 NGCDAVELRVDLLKQHDSHFISNQIGILRNQTSVPILFTIRTKSQGGRFPDDSYEDIERL 1120
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVAR 161
L LA++LG +Y+D+EL + DS+ K+ + K+I S H++ T ++ N
Sbjct: 1121 LNLAIKLGVEYVDLELSLPESLLDSVASKR-QFTKIIGSHHDFSGTVKWNNVEWENKYLL 1179
Query: 162 IQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
DI+KF TA + D + ++H+ P IG+ MG G +SR+ F LT
Sbjct: 1180 ALKLNVDIIKFVGTATSLNDNWELEHFRSLHTDKPFIGINMGPLGKVSRV----FNTILT 1235
Query: 221 FGTLENGIVSA-PGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAFKS 278
T ++ SA PGQ T+K++ + F Q G + K F I+GKP+ HSKSP L+ +
Sbjct: 1236 PVTHKDLPSSAAPGQLTLKEINEY--FGQFGGSSRKKFYIVGKPISHSKSPELHKTFYDE 1293
Query: 279 VGFNGVFVHLLVDDIAKFFQ--TYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
G + F DD AK F +++ G + TIP K +K +E+ AKSIGA+N
Sbjct: 1294 FGLSHTFDKFETDDAAKVFNDLVKGNDELGGCAVTIPLKIDMLKYVNELTDSAKSIGALN 1353
Query: 337 CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKAL 396
II DG+ G NTD++G I D L G A + +V+G GG +A
Sbjct: 1354 TII-PIGDGRFIGDNTDWIG----IRDSLH-----QAGCEIAPESSVGLVVGGGGTSRAA 1403
Query: 397 AYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD-LENFNPEDGMILANTTSIGM 453
Y G +++ + NRT + E+ + + + D L+ + +D + A +T G
Sbjct: 1404 VYALHQMGCSKIYMLNRTPSKLSEIKNHFPSNYNIHIVDSLDAIDEDDKLDAAVSTVPGD 1463
Query: 454 QPKVDE-----TPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAY 508
+P D+ + + GH A++ +A Y P+ T ++ A G +V G +M + Q
Sbjct: 1464 KPLDDQLISLLKKLLEKKRGH-AVLLEAAYKPRETPIMALAFSRGWKVVPGSKMLVNQGI 1522
Query: 509 EQYERFTG 516
EQ+ ++TG
Sbjct: 1523 EQFYKWTG 1530
>gi|374814900|ref|ZP_09718637.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-1]
Length = 503
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 243/534 (45%), Gaps = 79/534 (14%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP----VPTL 81
IC+ + G++ K + + K D+ E+R+D L +P E + LI+ P +P +
Sbjct: 4 ICLCLTGKTFAKNLEVLEKYRKY-VDIAELRVDFL---DPDE--RFLIRRFPELAGLPVI 57
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVE--------LQVAREFN 126
T R + +GG + G E R+ + + AD Y+D+E + AR F
Sbjct: 58 LTIRRLMDGGNFVGGEGSRIALFSKGLAFAEADRRRNFAYVDLEDDLNVPSLEEAARTFG 117
Query: 127 DSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF 186
++I S HN Q ED + + + G +I K A DV RV+
Sbjct: 118 ----------TRIIRSYHNMQGIG--EDPAARLRNMLHVGDEIAKAAVMPQSFEDVRRVY 165
Query: 187 QITVHSQ-VPIIGLVMGERGLISRILCAKFGGFLTFGTL---ENGIVSAPGQPTIKDLLD 242
Q + + I L MG G+ +RIL G +L++ T ++ APGQ + +DL++
Sbjct: 166 QAARETAGMEKILLCMGHLGISTRILAEYMGCYLSYTTAMGEKDFPPGAPGQLSPRDLVE 225
Query: 243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS 302
LY FR + P TK+FGI+G P+ + SP +N F S + V+V D + F Q
Sbjct: 226 LYRFRNVTPKTKLFGILGYPLNVTSSPEFFNTVFSSEKIDAVYVPFPSDSVEAFMQLAGE 285
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG------ 356
+ AG S TIP+KE + +S+GA N +I G NTD G
Sbjct: 286 INLAGASVTIPYKEKVLPYLGHKTAEVESLGACNTLICGPQGWS--GANTDTHGFSDSLL 343
Query: 357 AISAIEDGLRGRLNV--SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414
A + +D R R+ + SGG + A A ++F + GKAL + NRT
Sbjct: 344 AFTGKKDFKRMRITIIGSGGAARAAAAEVFRL-----KGKAL------------VLNRTL 386
Query: 415 DRARELAE----TVGGHALSLADL-ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH 469
ARELA GG A+L +N I+ TTS+GM P ++ P+ +
Sbjct: 387 VHARELAALYRFAWGGLDGRGAELMSGYND----IIIQTTSVGMDPDLEGDPLELYFFNG 442
Query: 470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG--LPGKM 521
+V D +Y P+ TR L A +G +++G +M I QA QY F G P K+
Sbjct: 443 TEVVMDLIYKPERTRFLTRAAAAGCKVLNGHDMLIRQAKYQYSCFFGKEYPSKL 496
>gi|337289037|ref|YP_004628509.1| Shikimate dehydrogenase [Thermodesulfobacterium sp. OPB45]
gi|334902775|gb|AEH23581.1| Shikimate dehydrogenase [Thermodesulfobacterium geofontis OPF15]
Length = 274
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 156/280 (55%), Gaps = 24/280 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
+V+GIIG PV HS SPI++N AF+ V+ + D +AK + + + G S T
Sbjct: 3 EVYGIIGDPVSHSLSPIMHNLAFREKNIRAVYGAFRVSADQLAKAVEGIKALNIKGLSVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKE ++ DE+D +A IGAVN ++ ++ G L GYNTD++G I A E
Sbjct: 63 IPHKEKIIEYLDEIDEIAYEIGAVNTVLNKE--GILKGYNTDWIGVIKAFE--------- 111
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALS 430
GV L K VVIGAGGA KA+ Y K+K ++ + NRT+++A+ L E A
Sbjct: 112 VNGVE--LRDKKIVVIGAGGASKAVIYALIKSKAKKIHVYNRTFEKAKILEEKFKIIAKP 169
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+L+N +G I+ TTS+G+ K ETP+ + + + + D VY P T+ L AE
Sbjct: 170 WEELKN---AEGDIIIQTTSVGL--KSWETPVEEEIISRFKVAMDIVYLPLKTKFLSIAE 224
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL--PGKMNAPHLYK 528
G I+ GL+M + Q EQ++ +TG+ P ++ LY+
Sbjct: 225 RYG-KIIDGLQMLLYQGVEQFKLWTGIEPPVELMKKALYE 263
>gi|386738224|ref|YP_006211405.1| shikimate dehydrogenase [Bacillus anthracis str. H9401]
gi|384388076|gb|AFH85737.1| Shikimate dehydrogenase [Bacillus anthracis str. H9401]
Length = 277
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 162/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+I M P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTICMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423650199|ref|ZP_17625769.1| shikimate dehydrogenase [Bacillus cereus VD169]
gi|401282617|gb|EJR88516.1| shikimate dehydrogenase [Bacillus cereus VD169]
Length = 277
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229031985|ref|ZP_04187970.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
gi|228729340|gb|EEL80332.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 162/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + D++D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMDYLDKIDPLAKKIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE--TVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIASCTATVHS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA + +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAVVQNGIDMFVYQGALAFEMWTG 259
>gi|229135160|ref|ZP_04263960.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228648288|gb|EEL04323.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 159/271 (58%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A+ L E V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228902860|ref|ZP_04067003.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|434377502|ref|YP_006612146.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
gi|228856784|gb|EEN01301.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|401876059|gb|AFQ28226.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N AF+ + N + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---HEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228941501|ref|ZP_04104051.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974431|ref|ZP_04134999.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981026|ref|ZP_04141328.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|384188408|ref|YP_005574304.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676723|ref|YP_006929094.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452200800|ref|YP_007480881.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778686|gb|EEM26951.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228785267|gb|EEM33278.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818151|gb|EEM64226.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942117|gb|AEA18013.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175852|gb|AFV20157.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452106193|gb|AGG03133.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 277
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423483917|ref|ZP_17460607.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
gi|401141468|gb|EJQ49023.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
Length = 277
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEVD +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVDPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLVDVGVKEIDIANRTRDKAENLIAGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228954621|ref|ZP_04116645.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229192547|ref|ZP_04319508.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|423426468|ref|ZP_17403499.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|423502980|ref|ZP_17479572.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449091298|ref|YP_007423739.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228590854|gb|EEK48712.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228805067|gb|EEM51662.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401111215|gb|EJQ19114.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|402459201|gb|EJV90938.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449025055|gb|AGE80218.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 277
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228987587|ref|ZP_04147703.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772128|gb|EEM20578.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 160/274 (58%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV + + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+ +AK IGAVN ++ + DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMNYLDEIAPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S S L K +++GAGGA +A+ + G R + +ANRT D+A+EL TV
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHS 170
Query: 427 HALSLA----DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL + EN++ I+ TT+IGM P+V TP+ +L +V D +Y P
Sbjct: 171 VALSLEKATEEQENYD-----IIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T++L EA+E GA I +G++MF+ Q +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259
>gi|255718639|ref|XP_002555600.1| KLTH0G13090p [Lachancea thermotolerans]
gi|327507660|sp|C5DN02.1|ARO1_LACTC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238936984|emb|CAR25163.1| KLTH0G13090p [Lachancea thermotolerans CBS 6340]
Length = 1579
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 240/500 (48%), Gaps = 42/500 (8%)
Query: 48 SGADLVEIRLDGLKNFNPRENIKTL----IKESPVPTLFTYRPIWEGGQY-DGDENERVD 102
+G VE+R+D LK+++ K L + S +P +FT R +GGQ+ D D++
Sbjct: 1088 AGCSAVELRVDQLKSYDLDFVAKQLSILRLASSSLPIIFTIRTKSQGGQFPDDDKSTLGS 1147
Query: 103 VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTPSVEDLSNLVA 160
+L LA+E+G +++D+EL ++ E S+ K K+I S H++ ++ + + N
Sbjct: 1148 LLSLALEVGVEFVDMELTLSSELQYSLVNNK-RNTKIIGSHHDFDAKFDWNDSEWENRYN 1206
Query: 161 RIQASGADIVKFATTALDITDVARVFQITV-HSQVPIIGLVMGERGLISRILCAKFGGFL 219
+ + D+VKF TA D D ++ Q + H+ P+I + M + G +SR+L +
Sbjct: 1207 QALSLDVDVVKFVGTAKDFEDNLKLEQFRLQHTAKPLIAINMTDVGKMSRVLNTVLTP-V 1265
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L + SAPGQ T+ + ++Y G K F ++G P+ HS+SP+L+N +K +
Sbjct: 1266 TSSLLPSA--SAPGQLTLSQINEIYTLLG-GFSAKNFYVVGSPISHSRSPVLHNTGYKIL 1322
Query: 280 GFNGVFVHLLVDDIAKFF-QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI 338
G F ++ + S G + TIP K ++ DE+ AK IGAVN +
Sbjct: 1323 GLPHKFEKFETSSASEVKDKLLSKCKLGGLAVTIPLKLDIMEFMDELSESAKLIGAVNTV 1382
Query: 339 IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY 398
I DGK G NTD++G ++ ++ GV + G VIGAGG +A Y
Sbjct: 1383 IPL-GDGKFKGDNTDWLGIYNSF---------LANGVPENVRGNSGFVIGAGGTSRAAVY 1432
Query: 399 GAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV 457
G + + + NRT ++ +L ++ +L LE+ +G+ + ++ P
Sbjct: 1433 ALHQLGCSDIHLVNRTVEKPHDLKKSFPSE-YNLHVLEDSQQAEGISGSVALAVSCVPA- 1490
Query: 458 DETPIPKHALGHYALV-------------FDAVYTPKITRLLREA-EESGATIVSGLEMF 503
+ P+ + L V +A Y P +T +++ A +E I+ G +M
Sbjct: 1491 -DKPLDDNLLARVRAVLAKAQGTSFKPTLLEAAYKPAVTPMMKTASDEFSWHIIPGSQML 1549
Query: 504 IGQAYEQYERFTGLPGKMNA 523
+ Q Q++ +TG NA
Sbjct: 1550 VHQGVAQFQLWTGFRAPFNA 1569
>gi|147837951|emb|CAN60562.1| hypothetical protein VITISV_034025 [Vitis vinifera]
Length = 124
Score = 162 bits (411), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/115 (63%), Positives = 93/115 (80%)
Query: 8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE 67
+A+ + G R+N TLICVPIM +SVD+M+ + KA G DLVEIRLD LKNF+PR+
Sbjct: 8 LATSDIQIPEGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQ 67
Query: 68 NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVA 122
+++ L+K+SP+PTL TYRP WEGGQYDGDE +R+D LRLA+ELGADYIDVELQV+
Sbjct: 68 DLQFLVKQSPLPTLVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVS 122
>gi|73668461|ref|YP_304476.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
gi|121718714|sp|Q46DZ6.1|AROE_METBF RecName: Full=Shikimate dehydrogenase
gi|72395623|gb|AAZ69896.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
Length = 280
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 23/274 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+VFG+ G P+ HS SP ++N AF ++G + ++ V + + K + F G + T
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 312 IPHKEAAVKC-CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
+P KE A+K C + D +A+ IGAVN I+ ++ G++ GYNTD +GA A+++
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNS------ 115
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ + G VV GAGGA +++A+ A GA + I NRT RA ELA+ + +LS
Sbjct: 116 -----AVEMEGSKIVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAASLS 170
Query: 431 -------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
L+ L+N +D IL NTT++GM P VD L VFD VY P T
Sbjct: 171 GNVTGKGLSGLKNL-LQDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPLET 229
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
RLLREA+ SGA VSG+ M + Q E ++ +TG+
Sbjct: 230 RLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGI 263
>gi|423582542|ref|ZP_17558653.1| shikimate dehydrogenase [Bacillus cereus VD014]
gi|401213421|gb|EJR20162.1| shikimate dehydrogenase [Bacillus cereus VD014]
Length = 277
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 171/292 (58%), Gaps = 33/292 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV +++ + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A + DE+D +AK IGAVN ++ + GKL GYNTD +G + A++ +V
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQ-------SV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S S L K +++GAGGA +A+ + G + + +ANRT D+A+EL A T H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHS 170
Query: 429 LSLA------DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
+ L+ + EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P
Sbjct: 171 VPLSLEKATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLL 534
T++L EA+E GA I +G++MF+ Q +E +TG AP++ + L++
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTG-----RAPNIERMKQLVI 272
>gi|229117832|ref|ZP_04247196.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|423377808|ref|ZP_17355092.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
gi|423547637|ref|ZP_17523995.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|423622578|ref|ZP_17598356.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|228665629|gb|EEL21107.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|401179358|gb|EJQ86531.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|401260698|gb|EJR66866.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|401636074|gb|EJS53828.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
Length = 276
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 157/268 (58%), Gaps = 17/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTYSSNDFAGFSCTI 312
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + DE+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ ++S
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS 113
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSL 431
S L K +++GAGGA +A+ + G + + +ANRT D+A+EL S+
Sbjct: 114 ---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSV 170
Query: 432 A-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
A LE E G I+ TT+ GM P V+ TP+ +L +V D +Y P T++L E
Sbjct: 171 ALSLEKATEEQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEATIVSDIIYNPFETKILCE 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GA I +G++MF+ Q +E +TG
Sbjct: 231 AKEQGAIIQNGIDMFVYQGALAFEMWTG 258
>gi|423417741|ref|ZP_17394830.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
gi|401106912|gb|EJQ14869.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
Length = 277
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 157/270 (58%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ A + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K +++GAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---KEPLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANVNS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
HALSL E +I+ TT+IGM P V+ TP+ +L A+V D +Y P T++L
Sbjct: 171 HALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A+E GA I +G++MF+ Q +E +TG
Sbjct: 230 GDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423389348|ref|ZP_17366574.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
gi|401641439|gb|EJS59156.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
Length = 277
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 156/269 (57%), Gaps = 20/269 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ A + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +AK IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVAPLAKQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K +++GAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---KEPLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANVNS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
HALSL E +I+ TT+IGM P V+ TP+ +L A+V D +Y P T++L
Sbjct: 171 HALSLEQAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFT 515
+A+E GA I +G++MF+ Q +E +T
Sbjct: 230 GDAKEQGAIIQNGIDMFVYQGALAFEMWT 258
>gi|423463981|ref|ZP_17440749.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
gi|402420248|gb|EJV52519.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
Length = 276
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 157/268 (58%), Gaps = 17/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTYSSNDFAGFSCTI 312
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKTLGISGFNVTT 62
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + DE+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ ++S
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS 113
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSL 431
S L K +++GAGGA +A+ + G + + +ANRT D+A+EL S+
Sbjct: 114 ---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSV 170
Query: 432 A-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
A LE E G I+ TT+ GM P V+ TP+ +L +V D +Y P T++L E
Sbjct: 171 ALSLEKATEEQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCE 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GA I +G++MF+ Q +E +TG
Sbjct: 231 AKEQGAIIQNGIDMFVYQGALAFEMWTG 258
>gi|423561197|ref|ZP_17537473.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
gi|401201454|gb|EJR08319.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
Length = 277
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S L GK +++GAGGA +A+ + G + V +ANRT D+A+EL A T ++
Sbjct: 114 S---HEPLQGKRILLLGAGGASRAIYFSLADVGVKEVDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229076009|ref|ZP_04208982.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|229098806|ref|ZP_04229744.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|229104966|ref|ZP_04235622.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|407706862|ref|YP_006830447.1| stage IV sporulation protein FB [Bacillus thuringiensis MC28]
gi|423440916|ref|ZP_17417822.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|423448916|ref|ZP_17425795.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|423533344|ref|ZP_17509762.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
gi|423541401|ref|ZP_17517792.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|423615324|ref|ZP_17591158.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|228678460|gb|EEL32681.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|228684650|gb|EEL38590.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|228707121|gb|EEL59321.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|401129510|gb|EJQ37193.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|401172589|gb|EJQ79810.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|401261003|gb|EJR67170.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|402417577|gb|EJV49877.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|402463563|gb|EJV95263.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
Length = 276
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 157/268 (58%), Gaps = 17/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTYSSNDFAGFSCTI 312
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + DE+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ ++S
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS 113
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSL 431
S L K +++GAGGA +A+ + G + + +ANRT D+A+EL S+
Sbjct: 114 ---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSV 170
Query: 432 A-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
A LE E G I+ TT+ GM P V+ TP+ +L +V D +Y P T++L E
Sbjct: 171 ALSLEKATEEQGNYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCE 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GA I +G++MF+ Q +E +TG
Sbjct: 231 AKEQGAIIQNGIDMFVYQGALAFEMWTG 258
>gi|296813541|ref|XP_002847108.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
gi|327507651|sp|C5FQ73.1|ARO1_ARTOC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238842364|gb|EEQ32026.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
Length = 1571
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 237/521 (45%), Gaps = 67/521 (12%)
Query: 37 KMVVDMGKANASGADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRP 86
++ D+ +A G+D +E+R+D LK+ + E + L + P +FT R
Sbjct: 1064 QLSADILRAATFGSDAIELRVDLLKDPSSTSGVPSVGYVAEQMSFLRSHASQPLIFTIRT 1123
Query: 87 IWEGGQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
+GGQ+ D ++ +++ +LA+ +G++++D+EL + ++ K K+I S H+
Sbjct: 1124 KAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPNDLLHAVTEMK-GFSKIIASHHD 1182
Query: 146 YQYTPSVEDLSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLV 200
S + S + +A DI+K A D + Q ++ VPII +
Sbjct: 1183 VNSQLSWSNGSWIQYYNKALQHGDIIKLIGVAKTFEDNMALQQFKSWAEKSYPVPIIAIN 1242
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGII 259
MG +G +SRIL +F ++ L +APGQ + KD+ MG D K F +
Sbjct: 1243 MGNKGRLSRIL-NRFMTPVSHPALP--FKAAPGQVSAKDIRQALTL--MGELDAKKFALF 1297
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKP+ S+SP L+N F GF + L D + S+DF G S TIP KE +
Sbjct: 1298 GKPISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRSDDFGGASVTIPLKEQIM 1357
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDG---KLFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
DE+ AK IGAVN I+ G +L GYNTD+ G ++D +G +
Sbjct: 1358 GLLDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKD--------AGAIC 1409
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLE 435
S G+ + IG+GG +A Y + G + + + RT +LA +
Sbjct: 1410 SN-NGESALTIGSGGTARAAIYSLHSMGYSPIYLVGRTPSNLSKLASSFPAE-------- 1460
Query: 436 NFNPEDGMILANTTSIGMQPKVD----------ETPIPK---------HALGHYALVFDA 476
+N + ++ + S+ PKV E P+P+ ++ D
Sbjct: 1461 -YNIQ---VVQDIKSVQAAPKVAISTIPGDQELENPLPELITQIMEKGQDSSRECILLDM 1516
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T + R A +G I+ GLE+ + Q Q+E +TGL
Sbjct: 1517 AYKPDVTTMARLASPAGWKIIKGLEVLVAQGIYQFEHWTGL 1557
>gi|229071841|ref|ZP_04205054.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|423437780|ref|ZP_17414761.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
gi|228711271|gb|EEL63233.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|401120935|gb|EJQ28731.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
Length = 277
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT ++A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423673876|ref|ZP_17648815.1| shikimate dehydrogenase [Bacillus cereus VDM062]
gi|401310242|gb|EJS15567.1| shikimate dehydrogenase [Bacillus cereus VDM062]
Length = 277
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYYAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A+ L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|228910172|ref|ZP_04073991.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|423358629|ref|ZP_17336132.1| shikimate dehydrogenase [Bacillus cereus VD022]
gi|228849455|gb|EEM94290.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|401084501|gb|EJP92747.1| shikimate dehydrogenase [Bacillus cereus VD022]
Length = 277
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---HEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|218899502|ref|YP_002447913.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228967401|ref|ZP_04128434.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564189|ref|YP_006606913.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
gi|226724115|sp|B7IYI7.1|AROE_BACC2 RecName: Full=Shikimate dehydrogenase
gi|218543181|gb|ACK95575.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228792289|gb|EEM39858.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401792841|gb|AFQ18880.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
Length = 277
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 163/270 (60%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---HEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|320582025|gb|EFW96244.1| Pentafunctional arom protein [Ogataea parapolymorpha DL-1]
Length = 1739
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 243/494 (49%), Gaps = 48/494 (9%)
Query: 48 SGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDV 103
+G D VE+R+D LK+++ E + L + +P +FT R + +GG++ DGD ++ ++
Sbjct: 1069 TGCDAVELRVDLLKSYDVTDVSEQVGLLRNHTSLPIVFTVRSVSQGGKFPDGDYDKVQEL 1128
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ-----YTPSVEDLSNL 158
LA +LG ++D+EL + D++ K+ K+I S H++ + E L
Sbjct: 1129 CELAFKLGVGFLDLELSLPEGLLDTLCSKR-RFTKIIGSHHDFAGAFKWDSAEWESKYLL 1187
Query: 159 VARIQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGG 217
R+ D+VKF A + D + Q H++ P+I + MG+ G SR++
Sbjct: 1188 ATRLNV---DVVKFVGMAKEYKDNYLLEQFRESHTERPLIAINMGQYGQYSRVVNPVLTP 1244
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAF 276
+T L N SAPGQ +IK + + +G +T K F I+G+P+GHS+SP L+ A+
Sbjct: 1245 -VTHERLPNA--SAPGQLSIKQIFQARSL--IGLETPKHFCIVGEPIGHSRSPALHQAAY 1299
Query: 277 KSVGFNGVFVHLLVDDIAKFF--QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
+ G F D A+ + S +F G + TIP K +K DE+ AK+IGA
Sbjct: 1300 EVFGLPHTFGKFETSD-AQLVKEKVLSDPNFGGCAITIPLKVDMMKYADELSESAKTIGA 1358
Query: 335 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
+N +I +GK G NTD++G + + G +S + G +VIGAGG +
Sbjct: 1359 INTLIPL-GNGKFRGDNTDWLGITQSF---------TNNGCTSKITGN-GLVIGAGGTSR 1407
Query: 395 ALAYGAKAKGA-RVVIANRTYDRAREL-AETVGGHALSLAD-LENFNPEDGMILA----- 446
A + G ++ + NRT + ++ A + + + D LE+ D ++L
Sbjct: 1408 AAVFALHQMGCQKIYVLNRTASKIADIKAHFPESYNIEILDSLESVKKIDQILLVVSTIP 1467
Query: 447 --NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE-ESGATIVSGLEMF 503
N + Q K+ ET + K G ++ +A Y P T +++ A + G ++ G EM
Sbjct: 1468 GYNEIELAFQEKI-ETALSKG--GSPKMLLEAAYKPLETPIMKLASTKYGWKVIPGREML 1524
Query: 504 IGQAYEQYERFTGL 517
+ Q Q+ RF GL
Sbjct: 1525 VNQGIHQFARFNGL 1538
>gi|330444737|ref|YP_004377724.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
gi|328807847|gb|AEB42020.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
Length = 480
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 221/492 (44%), Gaps = 48/492 (9%)
Query: 25 LICVPIMGES---VDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTL 81
L+C I G + + ++D + D +E+R+D L +P + L+ + P L
Sbjct: 4 LLCATINGPTFSQAKQQILD----SLPFVDSIELRVDSLSTLSPSA-LSFLLAMAKAPIL 58
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
+P G E++ L LA L Y+DV++Q ++ IR P+ K+I+
Sbjct: 59 TYKKP---QGLSSSAWVEKI--LSLA-ALSPTYLDVDIQFPQDALRKIRLSYPD-IKIIL 111
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H Y ED ++ ++ ++ A K T + R L +
Sbjct: 112 SHHTETY----EDPHHIYHKMHSTPAHYYKIVTYSETPLQTLRFVHAARSLPPQATALCL 167
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
GE L SR+L G + + + +APGQP + DLL YN++ + + +++ +IG
Sbjct: 168 GEHSLASRVLSPLMGNAMNYAAGRHASPAAPGQPHLDDLLA-YNYKNLSQEAEIYALIGN 226
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
PV S S I +N+ F + ++ + + + + +FF + F G S T+P K +
Sbjct: 227 PVDRSPSHITHNKFFSKLLIKASYIKIPLSPEQLTEFFIILRTLPFRGLSVTMPLKVPVM 286
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
D +D A+ GAVN I+ + L+GYNTD GA + L V GV A+
Sbjct: 287 DYMDILDPSAQLCGAVNTILFHED--VLYGYNTDGQGAFN---------LLVRKGV--AI 333
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
K ++GAGGA ++LA GA + I NRT+ A LA+ G A L DL F
Sbjct: 334 KNKHVAILGAGGAARSLAVTLAHHGAYIHIFNRTFQNAESLAKLCNGTAHPLKDLRGFAS 393
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
+ +L NT + + PI + D PK T L +A++ G + G
Sbjct: 394 D---LLINTLPPEIGFPWEFPPI----------ILDINTFPKNTPYLLKAQQLGVRVFHG 440
Query: 500 LEMFIGQAYEQY 511
EMFI QA Q+
Sbjct: 441 YEMFIEQALLQF 452
>gi|229013555|ref|ZP_04170688.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|229062033|ref|ZP_04199358.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|229169082|ref|ZP_04296797.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|423519034|ref|ZP_17495515.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|423591670|ref|ZP_17567701.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|423598349|ref|ZP_17574349.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|423660821|ref|ZP_17635990.1| shikimate dehydrogenase [Bacillus cereus VDM022]
gi|423669920|ref|ZP_17644949.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|228614310|gb|EEK71420.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|228717185|gb|EEL68860.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|228747715|gb|EEL97585.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|401160089|gb|EJQ67468.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|401231803|gb|EJR38305.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|401236619|gb|EJR43076.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|401299047|gb|EJS04647.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|401300862|gb|EJS06451.1| shikimate dehydrogenase [Bacillus cereus VDM022]
Length = 277
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A+ L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229081598|ref|ZP_04214094.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
gi|228701704|gb|EEL54194.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
Length = 277
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 165/270 (61%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S + L GK +++G+GGA +A+ + G + + +ANRT ++A+EL A T ++
Sbjct: 114 S---NEPLQGKRILLLGSGGASRAIYFSLADVGVKDIDVANRTVNKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+E GA I +G++MF+ Q +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|229019559|ref|ZP_04176375.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
gi|229025800|ref|ZP_04182199.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228735508|gb|EEL86104.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228741725|gb|EEL91909.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
Length = 277
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 156/270 (57%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ A + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K +++GAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---KEPLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANVNS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
HALSL E +I+ TT+IGM P V+ TP+ +L A+V D +Y P T++L
Sbjct: 171 HALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETKIL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GA I +G++MF+ Q +E +TG
Sbjct: 230 GGAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423489518|ref|ZP_17466200.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
gi|423495241|ref|ZP_17471885.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|423497965|ref|ZP_17474582.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|401151334|gb|EJQ58786.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|401161252|gb|EJQ68619.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|402431754|gb|EJV63818.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
Length = 278
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 158/272 (58%), Gaps = 23/272 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD---IAKFFQTYSSNDFAGFSC 310
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEEALGEAVKGLKALGISGFNV 62
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ +
Sbjct: 63 TTPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------S 113
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVG 425
+S L K ++IGAGGA +A+ + G + + IANRT D+A+ L V
Sbjct: 114 IS---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVN 170
Query: 426 GHALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T+
Sbjct: 171 SHALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 228
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 260
>gi|379012573|ref|YP_005270385.1| shikimate dehydrogenase [Acetobacterium woodii DSM 1030]
gi|375303362|gb|AFA49496.1| shikimate dehydrogenase AroE [Acetobacterium woodii DSM 1030]
Length = 286
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 156/280 (55%), Gaps = 29/280 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
DTK++ +IG P+ S SP L+N FK G + +++ + V +++ + + +F GF+
Sbjct: 6 DTKIYAVIGDPIAQSLSPQLHNGLFKEAGVDALYLPIAVKSENLENLIKGFRVMNFGGFN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE----DGL 365
T PHK +K DE+D +A+ IGAVN ++ R DGK+ GYNTD G I +IE D
Sbjct: 66 ITKPHKMEIIKYLDELDPLAQKIGAVNTVVYR--DGKMKGYNTDGFGFIKSIENKIVDQP 123
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
+ +LN+ +++G GGA K++A G +V+IANRT ++A LA +
Sbjct: 124 KEKLNI-------------LILGCGGAVKSVAMALADWGINQVMIANRTMEKAETLAAQI 170
Query: 425 G----GHALSLA-DLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G A+++A + E I+ N TS+GM TP+P+ + L++D +
Sbjct: 171 NDNWPGKAVAIAMETEELKKAAATATIIVNGTSLGMADTATRTPLPQALITKEQLIYDMI 230
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y+P +T+L+++A E GA +GLEM + Q +E +TG+
Sbjct: 231 YSPAVTQLMKDAREVGAQTENGLEMLLYQGLLAFELWTGI 270
>gi|423512448|ref|ZP_17488979.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
gi|402449419|gb|EJV81256.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L + ++IGAGGA +A+ + G + + IANRT D+A+ L V
Sbjct: 114 S---EDPLQERRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423612545|ref|ZP_17588406.1| shikimate dehydrogenase [Bacillus cereus VD107]
gi|401246134|gb|EJR52486.1| shikimate dehydrogenase [Bacillus cereus VD107]
Length = 277
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 157/271 (57%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTVDKAENLIAGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|365157945|ref|ZP_09354189.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
gi|363622355|gb|EHL73521.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
Length = 282
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 164/300 (54%), Gaps = 33/300 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+ HS SP ++N+AF +G + H+ +D+ K + + GF+ T
Sbjct: 3 KLYGVIGDPIAHSMSPAMHNDAFSRLGIPAYYHPFHVKPNDLKKAVEGMKAIGVEGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DE+D +A++IGAVN ++R+ + + GYNTD G + +++ L L++
Sbjct: 63 IPHKTAIIPLLDELDPLAEAIGAVNTVVRK--NDRWIGYNTDGDGFVRGLKETLGRDLHL 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAET----VGG 426
++IGAGGA +A+ Y ++ R++ IANRT ++A LAE
Sbjct: 121 DH----------ILIIGAGGAARAIYYTLASEHVRLIDIANRTMEKAARLAEQCPFETKT 170
Query: 427 HALSLADLE----NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
+ LS+++ E N++ I+ TTSIGM PK DE P+ L V D +Y P
Sbjct: 171 NVLSISEAEQRMGNYS-----IVIQTTSIGMSPKTDEMPLSLSLLKKGTFVSDIIYNPLE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHI 542
T+ L EA++ GA +G++MF+ Q +E++TG+ +P + ++L +H+
Sbjct: 226 TKFLAEAKKQGAITQNGIKMFVYQGVSAFEKWTGV-----SPDANRMEKIVLEQLGGYHV 280
>gi|423368385|ref|ZP_17345817.1| shikimate dehydrogenase [Bacillus cereus VD142]
gi|401080712|gb|EJP88996.1| shikimate dehydrogenase [Bacillus cereus VD142]
Length = 277
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 157/271 (57%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK ++ DE+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVTIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A+ L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V+ TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|423558082|ref|ZP_17534384.1| shikimate dehydrogenase [Bacillus cereus MC67]
gi|401191350|gb|EJQ98372.1| shikimate dehydrogenase [Bacillus cereus MC67]
Length = 277
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 156/271 (57%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAVMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|164655385|ref|XP_001728822.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
gi|327507662|sp|A8QCB2.1|ARO1_MALGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|159102708|gb|EDP41608.1| hypothetical protein MGL_3989 [Malassezia globosa CBS 7966]
Length = 1611
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 148/507 (29%), Positives = 246/507 (48%), Gaps = 60/507 (11%)
Query: 47 ASGADLVEIRLDGLK-NFNP-----RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER 100
++G D++E+R+D L + P RE + L + + +P L+T R + +GG+ + NE
Sbjct: 1109 SAGVDVLELRVDLLHADGQPSIDDVREQVALLRQYTSLPILYTVRSVSQGGRLPDEANEA 1168
Query: 101 VDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN-----YQYTPSVED 154
L RL + +G +Y+D+EL + + + K + +++ S H+ + P++
Sbjct: 1169 YFALTRLGLRMGCEYVDIELTRPSDGIEELAQAK-GQTRIVASFHDTSGTMHWMAPAMRR 1227
Query: 155 LSNLVARIQASGADIVKFATTALDITDV----ARVFQITVHSQVPIIGLVMGERGLISRI 210
L A + A +V FA T D D+ RV Q + P+I + M G +SRI
Sbjct: 1228 LYTR-ACVLGDIAKLVGFARTWQDSLDLESFRTRVAQ---EAPFPLIAINMQAAGQLSRI 1283
Query: 211 LCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPI 270
+ +T L + +APGQ +++D+ + + P F + G P+ HS+SP+
Sbjct: 1284 VNPLLTP-VTHPALP--VPAAPGQMSVRDIHHARHLLGLLPKRHFF-LFGSPITHSQSPL 1339
Query: 271 LYNEAFKSVGFNGVFVHLLVDDI-AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N AF+ +G V+ D + A + DF G S TIPHK + ++ D V A
Sbjct: 1340 IHNTAFELLGLPHVYARHETDSVDASVEALVRAGDFGGASVTIPHKLSIMQLLDSVSPHA 1399
Query: 330 KSIGAVNCII--RRQSDGK--LFGYNTDYVGAIS--AIEDGLRGRLNVSGGVSSALAGKL 383
+ IGAVN I+ R ++ G L G NTD+ + A DG R R +
Sbjct: 1400 QVIGAVNTIVPHRDETTGHMALHGENTDWRAIVDLVAKHDGGRTRACTA----------- 1448
Query: 384 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-------ALSLADLE 435
+VIGAGG+ +A Y GA R+++ NRT+++A LAE V +L+LA
Sbjct: 1449 -LVIGAGGSARAALYAMHKLGASRILLYNRTFEKAVNLAEQVPVEWRVEPVDSLALAAKA 1507
Query: 436 NFNPEDGMILANTTSIGMQ--PKVDETPIPKHALGHY-ALVFDAVYTPKITRLLREAEES 492
N +I++N + G P + +P L + D Y P+IT LL A++
Sbjct: 1508 KPN----VIVSNVPAQGTSFTPGGADIVLPLDLLSSDGGVAIDMAYRPEITPLLTLAQQH 1563
Query: 493 GATI-VSGLEMFIGQAYEQYERFTGLP 518
+ V G+E+ + QA+ Q+ +TGLP
Sbjct: 1564 QSWHGVRGIEILLAQAFHQFRLWTGLP 1590
>gi|402815730|ref|ZP_10865322.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
gi|402506770|gb|EJW17293.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
Length = 298
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 157/285 (55%), Gaps = 23/285 (8%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
R + +KV+ +IG P+ HSKSP+++N A + + NGV+ H+ + + +
Sbjct: 14 RNLDTSSKVYAVIGDPIAHSKSPLMHNAALQEMEVNGVYTAFHVKPEQLEHAVAGIRALG 73
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + TIPHKE + DE+D + IGAVN I+ +GKL+GYNTD +G + ++++
Sbjct: 74 LGGVNVTIPHKEQVMAYLDEIDESTRVIGAVNTIV--HCEGKLYGYNTDGLGYVRSLQEE 131
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAET 423
++ + S V+IGAGGA + +AY A+G + + IANRT +RA LAE
Sbjct: 132 MQADIPSS----------RIVIIGAGGAARGIAYALLAEGCKELTIANRTVERAHALAED 181
Query: 424 VGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
+ G ++ L D P+D I+ TTS+GM P +DE P+ K L + LV D +Y
Sbjct: 182 LSGFGKVRSVMLNDTPAIPPQDVDIVIQTTSVGMHPHIDEMPVAKEWLQSHMLVSDIIYN 241
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP 524
P T LL+ A+ G I +GL MF+ Q +E +TG M AP
Sbjct: 242 PLETALLQAAKAQGCRIHNGLGMFVHQGAIAFELWTG----MKAP 282
>gi|365983398|ref|XP_003668532.1| hypothetical protein NDAI_0B02540 [Naumovozyma dairenensis CBS 421]
gi|343767299|emb|CCD23289.1| hypothetical protein NDAI_0B02540 [Naumovozyma dairenensis CBS 421]
Length = 1572
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 234/512 (45%), Gaps = 67/512 (13%)
Query: 49 GADLVEIRLDGLKNFNP----RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL 104
G D VE+R+D L N++P R+ +P +FT R +GG + +E E ++ L
Sbjct: 1083 GCDAVEVRVDHLANYDPDYVNRQLSILRTSTDSLPIIFTIRTKKQGGNFPDEEYEAIEEL 1142
Query: 105 -RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+ A++ G +YID+EL + ++ K K+I S H++ Y + N +
Sbjct: 1143 YKTALKSGVEYIDLELTLPTSIQYNVLNNK-RFTKIIGSHHDFAAAYPWGDAEWENRYIQ 1201
Query: 162 IQASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
A DI+KF TA D V F+ H + P+I + M E G ISR+L +
Sbjct: 1202 ALALDVDIIKFVGTATKFEDNLVLEKFR-DAHKEKPLIAINMTECGKISRVLNTVLTP-I 1259
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L + SAPGQ T+K + ++Y G +K F ++G P+GHS+SPIL+N ++ +
Sbjct: 1260 TSHLLPSA--SAPGQLTLKQINEIYT-SMGGLSSKEFFVVGTPIGHSRSPILHNTGYELL 1316
Query: 280 GFNGVFVHLLVDD---IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
G F D I+K N G + TIP K +K E+ AK+IGAVN
Sbjct: 1317 GLPYNFDKYETDSAEVISKELLEGKPN-LGGLAVTIPLKLDIIKYMSELTDAAKAIGAVN 1375
Query: 337 CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKAL 396
+I + G NTD++G I++ L VS GV ++ G ++IGAGG +A
Sbjct: 1376 TVIPL-GNKTFRGDNTDWLG----IKNSL-----VSNGVPESVKGTAGLIIGAGGTSRAA 1425
Query: 397 AYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP 455
+ G +++ + NRT + EL E+ F E +++ N+ Q
Sbjct: 1426 VFALHKMGCSKIFMINRTTPKLEELKES-------------FPTEFNIVVVNSIEQAEQA 1472
Query: 456 K---------------VDETPIPKHA--------LGHYALVFDAVYTPKITRLLREAEES 492
K +D T + K G + DA Y P +T ++R A++
Sbjct: 1473 KEPVGIAVSCVPADKPLDPTLLSKLERFLTKGLNAGFPPTLLDAAYKPAVTPIMRLAKDK 1532
Query: 493 -GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+V G +M + Q Q+E++TG A
Sbjct: 1533 YEWQVVPGAQMLVHQGVAQFEKWTGFKAPYKA 1564
>gi|257457569|ref|ZP_05622736.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
gi|257444955|gb|EEV20031.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
Length = 496
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 234/513 (45%), Gaps = 52/513 (10%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE--NIKTLIKESPVPTLFT 83
+C+ + ++DK + + + D+VE+R D L +P+E +I+T K + +P + T
Sbjct: 5 VCLVLTENTIDKNI-QLIERYRPWIDIVELRADFL---DPQELLHIRTFPKIAHIPVILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVELQV--------AREFNDS 128
R +GGQ+ G E R+ + + Y+D+E V A+ FN
Sbjct: 61 VRRFLDGGQFKGGEGSRITLFARGLAFADTDPLDNFAYLDLESDVQAPSLEEAAQAFNIG 120
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
I I S H+ + TP ++D++ + I+ + +IVK A A ++ +V +F+
Sbjct: 121 I----------IRSIHSIK-TP-IKDIAAKIREIRRTDEEIVKIAYKADNLAEVTALFKQ 168
Query: 189 TVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDLYN 245
+ MG+ G+ SRIL K + I + D L +LY
Sbjct: 169 AQQLNGQNTLIAMGKYGIPSRILAPKLHSSFVYTMPREYIAKYHLEQEYIDPITLTELYR 228
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF 305
FR + T ++G+ G S SP ++N F+ N V++ + +I + +
Sbjct: 229 FRAINDQTGIYGVAGADTTKSLSPAIHNRGFEKKELNAVYIPISGTNIQEVIEFAKCTGI 288
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
AG S T P K + D + V+ + GAVN ++ + GK G NTD G I A+++ L
Sbjct: 289 AGLSITHPFKFDVIPFLDSLGPVSTACGAVNTVLF--NGGKRQGLNTDIDGFIRALQEFL 346
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
R L K +IG GGA A+A + + R+ ++A++LA+
Sbjct: 347 HVR---------NLRFKHVAIIGTGGAAHAIANAVHQLHGKACVFGRSAEKAKKLADRYN 397
Query: 426 --GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
L LA + +I+ +TS+GM E P+ ++ VFD +Y P+ T
Sbjct: 398 FQWEILDLASVRILKKYSEIII-QSTSVGMHE--GEDPLEFYSFSGNEKVFDVIYVPEKT 454
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LL+ AE +G I +G +M QAY+Q+E FTG
Sbjct: 455 TLLKRAEAAGCHICNGYDMLRYQAYKQFELFTG 487
>gi|423452362|ref|ZP_17429215.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|423470556|ref|ZP_17447300.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
gi|423521807|ref|ZP_17498280.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|401140000|gb|EJQ47557.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|401176469|gb|EJQ83664.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|402436222|gb|EJV68254.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
Length = 277
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 156/271 (57%), Gaps = 22/271 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DEV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K ++IGAGGA +A+ + G + + IANRT D+A L V
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNS 170
Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
HALSL EN D I+ TT+IGM P V TP+ +L +V D +Y P T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L +A+E GA I +G++MF+ Q +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259
>gi|333987942|ref|YP_004520549.1| shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826086|gb|AEG18748.1| Shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 283
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 154/276 (55%), Gaps = 26/276 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +FGI+G PV HS SP ++N F + + V+V H+ + S G +
Sbjct: 6 TSIFGIMGDPVEHSLSPPMHNTTFSKLAIDSVYVPFHVKKGYLQSAMVGARSMGIKGLNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK A ++ D +DT AK IGAVN + + + ++ GYNTD +GA+ AIE+
Sbjct: 66 TIPHKTAVIEYLDSLDTAAKLIGAVNTV--KFDENEVKGYNTDGLGAVKAIEE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH-- 427
+ + K V++GAGGA +A+++ +GA +VIANRT+++A EL E + G
Sbjct: 117 -----VTTVKNKKVVILGAGGAARAISFQILLEGAESLVIANRTFEKAIELKEDLAGKLD 171
Query: 428 ----ALSLA-DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPK 481
++L DLEN ++ IL NTT IGM P V++ P+ + H LV D VY P
Sbjct: 172 VNVKTVTLGFDLEN-ELKNADILINTTPIGMYPNVNQKPLVTADMMHGGLVVNDVVYNPL 230
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA ++GA +SG +M I Q E + +TG+
Sbjct: 231 ETGLLKEARKAGAQTISGTKMLIYQGVEAFRIWTGI 266
>gi|326433195|gb|EGD78765.1| hypothetical protein PTSG_11780 [Salpingoeca sp. ATCC 50818]
Length = 1521
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 219/484 (45%), Gaps = 48/484 (9%)
Query: 51 DLVEIRLDGLKNFNPRE------NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL 104
D+VE+R+D L P + I L + P LFT R +GG+ DE+ ++L
Sbjct: 1027 DMVELRVDLLDQ--PTDAAFIAGQIALLRASTAKPILFTVRSAKQGGKLALDEDGYFNLL 1084
Query: 105 RLAMELGADYIDVELQVAREFNDSI----RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVA 160
L LG D +DVE +S+ RG +++S H + V+++ LV
Sbjct: 1085 SLGARLGCDALDVETCWDSSHIESVCAPLRGTT-----IVMSQHFGRPCTHVDEVLTLVQ 1139
Query: 161 RIQASGADIVKFATTALDITDVARVFQIT--VHSQV----PIIGLVMGERGLISRILCAK 214
D++K TA +++D + Q VH++ P+I L+MGE+G +SR+
Sbjct: 1140 GSNLPFVDVIKIVFTATEVSDCFLLQQARERVHAEKVVTKPMILLLMGEQGRLSRVT--- 1196
Query: 215 FGGFLTFGTLENGI-VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYN 273
LT T N +APGQ T + +L L + F I+G PV S SP+++
Sbjct: 1197 -NTMLTPVTHANMPGTAAPGQLTWEQVLRLRRTLGLLRPRSFF-IVGSPVALSPSPLMHR 1254
Query: 274 EAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIG 333
F+ G + L + ++S F G S T+P K++ + +D A+ IG
Sbjct: 1255 TGFRLAGLPWTYERLDTTSMVDVRSVFASEGFMGASVTMPFKQSVLPLLAWMDEHARRIG 1314
Query: 334 AVNCIIRRQS-DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA 392
AVN ++R + + +L G+NTD+VG + ++ + G +V+GAGG
Sbjct: 1315 AVNTVVRGGAGNTQLLGFNTDWVGIVKPLQSAMPAETRERTGN--------VLVLGAGGT 1366
Query: 393 GKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451
+A Y G V + NRT +RA L G A+ A+ D ++L I
Sbjct: 1367 ARAACYALHYLGFTSVYVVNRTPERAEALCRDFGVRAIDSAE-----ALDDVVLI----I 1417
Query: 452 GMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
P +P L +VFD Y P++T LL +A +G I G++M I Q EQ
Sbjct: 1418 STLPPTAAATVPATLLQSKPVVFDVTYIPRMTPLLEQAHAAGCRIFGGIDMLIAQGIEQQ 1477
Query: 512 ERFT 515
FT
Sbjct: 1478 RLFT 1481
>gi|301094292|ref|XP_002896252.1| pentafunctional AROM polypeptide, putative [Phytophthora infestans
T30-4]
gi|262109647|gb|EEY67699.1| pentafunctional AROM polypeptide, putative [Phytophthora infestans
T30-4]
Length = 1548
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 232/496 (46%), Gaps = 46/496 (9%)
Query: 47 ASGADLVEIRLDGLKNFNPRE----NIKTLIKESPVPTLFTYRPIWEGGQY-DGDENER- 100
+ GAD +E+R+D LK + + L S +P +FT R +GG + DG+E+E+
Sbjct: 1040 SKGADALELRVDLLKYAEDTKFVAAQVALLRSLSTLPIIFTVRSKVQGGAFPDGEEHEKK 1099
Query: 101 -VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLV 159
++L+L + LG +++D+E +R+ + + + + +I S H Q S + +
Sbjct: 1100 MFELLQLGVRLGCEFVDMETCWSRKAREQLLAHR-HRSAIISSFHAVQKPTSEAEAKAIF 1158
Query: 160 ARIQASG-ADIVKFATTALDITD------VARVFQITVHSQVPIIGLVMGERGLISRILC 212
+ G IVK A D VA+ F +PII L E G ++R+L
Sbjct: 1159 RECYSQGRVQIVKVVVKAYSPVDALMVDRVAKDFASAWQQHMPIISLCTTEAGKLTRVLN 1218
Query: 213 AKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILY 272
+T L +APGQ +I++++ L + P + F + G P+ S SP ++
Sbjct: 1219 RTLTP-VTHPLLPAA--AAPGQLSIEEIMTLRKQLGLLPAREFF-LFGSPIQKSPSPAMH 1274
Query: 273 NEAFKSVGFNGVFVHLLVD-----DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
N F+S +F + L D +I K Q ++N F G S TIP K ++ DE+
Sbjct: 1275 NAGFESTSLASLFTYGLHDTTDVVEIVKRMQVPNTN-FGGGSVTIPFKVDIMEHLDELSP 1333
Query: 328 VAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
A++IGAVN ++R+ +G + G NTD++G + I L L+V A +
Sbjct: 1334 AARAIGAVNTVMRQDRNGSPYWKGDNTDWLGILRPITKRL-ATLSVKKPAHELTA----L 1388
Query: 386 VIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
V+GAGG A +Y + G ++ + NRT ++A+ +A ALS E D ++
Sbjct: 1389 VVGAGGTSMAASYAMRQLGVGKLFVFNRTLNKAQAVAARFEAEALSELTPETLARVDVVV 1448
Query: 445 LANTTSIGMQPKVDETPIPKH-----ALGHYALVFDAVYTPKITRLLREAEESGATI-VS 498
G Q +P H A G +V DA Y P +T +L A +G + +
Sbjct: 1449 GTIPAQAGFQ-------LPDHLVAARADGSKVVVLDAAYMPPVTPMLAHAHAAGGVLCIQ 1501
Query: 499 GLEMFIGQAYEQYERF 514
G EM Q EQ+ R+
Sbjct: 1502 GYEMLYEQGIEQFYRW 1517
>gi|20807710|ref|NP_622881.1| shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|254479120|ref|ZP_05092471.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
gi|24211499|sp|Q8RAG2.1|AROE_THETN RecName: Full=Shikimate dehydrogenase
gi|20516261|gb|AAM24485.1| Shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|214034934|gb|EEB75657.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
Length = 280
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 156/284 (54%), Gaps = 36/284 (12%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-----LVDDIAKFFQTYSS 302
++ TKVFG+IG PV HS SP+++N +F+ + FNGV+V L+++ K +
Sbjct: 2 KIDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENAVKGLKALG- 60
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAIS 359
GF+ T+PHKE+ + D V A+ IGAVN ++ +G L GYNTD ++ ++
Sbjct: 61 --IKGFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVV--NENGILKGYNTDVQGFIDSLK 116
Query: 360 AIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRAR 418
+++ +RGR K FV +GAGGA KA+ + +G +VIANRT ++A+
Sbjct: 117 ELKEDVRGR-------------KAFV-LGAGGASKAICFALAREGVESIVIANRTLNKAK 162
Query: 419 ELAETVGGH------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL 472
LAE + S+ ++E FN D IL NTTS+GM P+V +P+ + +
Sbjct: 163 ALAEYIREEFKMKCDYCSIEEVEKFNEID--ILINTTSVGMHPEVGNSPVSEEVVAKANF 220
Query: 473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
V+D +Y P T L+ A ++G +GL M + QA + +TG
Sbjct: 221 VYDLIYNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTG 264
>gi|304403896|ref|ZP_07385558.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346874|gb|EFM12706.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 293
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 144/281 (51%), Gaps = 26/281 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +FG+IG P+ HSKSP++ N AF+ G NGV+ H+ D + F + G +
Sbjct: 19 TVLFGVIGDPIRHSKSPVMLNRAFREAGVNGVYTAFHITPDKLGDFIAGVRAMGIRGVNV 78
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D +D A +IGAVN I+ +G L G+NTD +G + ++++ L+
Sbjct: 79 TIPHKLDVMKHLDRIDESALAIGAVNTIV--NDNGVLTGFNTDGIGYVRSLKEEAEPTLD 136
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
GK VV+GAGGA + + Y A + I NRT RA ELA ++
Sbjct: 137 ----------GKNIVVLGAGGAARGIVYALTNESPAAITIVNRTEQRAVELAASM----R 182
Query: 430 SLADLENFNPE-------DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
AD+ + + D I+ NTTS GM P V+E+P+ L A+ D +Y P
Sbjct: 183 ERADVRGVSTDSLQSVCVDADIIINTTSTGMFPHVEESPVEASWLRPGAVASDIIYNPMK 242
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T+ L +AE G I GL MFI Q +E +TG P A
Sbjct: 243 TKFLADAERQGCRIHGGLGMFIYQGAYAFEYWTGQPAPAAA 283
>gi|62185307|ref|YP_220092.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila abortus S26/3]
gi|424825347|ref|ZP_18250334.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
gi|62148374|emb|CAH64141.1| shikimate 5-dehydrogenase [Chlamydophila abortus S26/3]
gi|333410446|gb|EGK69433.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
Length = 477
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 227/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K L+ + P+ TL + + E + L+LA
Sbjct: 26 DSIELRIDCLLSLSSNE-LKHLVSLAKKPILTLRKHTSLSEIAWIE-------RTLQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-KIKIILSYH----SETSEHIPNLCKEMLRQQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ TD R QI H L MG G+ SRIL + + + +
Sbjct: 132 HYKIAITSTKSTDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGIHAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
APGQ +I+DLL YN+ + + +++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAPGQLSIEDLLA-YNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K A ++ D +D + + N ++ + K
Sbjct: 251 LLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVFH--NNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L ++G+GGA KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------PLQNMHVGIVGSGGAAKAIATTFAYSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P VD IP+
Sbjct: 358 ISIFNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILC------LPPGVD---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 ERF 466
>gi|125973371|ref|YP_001037281.1| shikimate dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|256004347|ref|ZP_05429328.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|385778715|ref|YP_005687880.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|419722931|ref|ZP_14250067.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
gi|419724721|ref|ZP_14251780.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|125713596|gb|ABN52088.1| shikimate 5-dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|255991631|gb|EEU01732.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|316940395|gb|ADU74429.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|380771940|gb|EIC05801.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|380780988|gb|EIC10650.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
Length = 298
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 23/276 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G++G PV HS SP L+N +G + V++ L V +D+ + + DF GF+
Sbjct: 11 TKLLGLVGNPVEHSISPQLHNTLSSLLGLDIVYIPLAVGKEDLETVVKALKALDFIGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP+K +K DE A +GAVN + ++ DG+L+GYNTD G + + ++
Sbjct: 71 TIPYKRDIMKYLDENSKEAILMGAVNTV--KKIDGRLYGYNTDAEGFLRSFKE------- 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
GV GK V+IGAGG +A+A ++ A ++ + NRT +++ ELAE V +
Sbjct: 122 -EAGV--GFKGKKVVLIGAGGVARAIAVKIASEDAEKISVVNRTVEKSVELAEVVNENIK 178
Query: 430 SLADLENFNP-------EDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTPK 481
+ + NF E+ I+ NTTS+GM PK ETP+ +V+D +Y P+
Sbjct: 179 EIVQVYNFEDKTFRMAFEESDIIINTTSVGMYPKTRETPVKFTECFNKNQIVYDVIYNPE 238
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T+ L +AE+ GA I++GL M Q YE +TG+
Sbjct: 239 KTKFLNDAEKRGAKIINGLGMLFYQGISAYEIWTGV 274
>gi|152976764|ref|YP_001376281.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
gi|189046305|sp|A7GT28.1|AROE_BACCN RecName: Full=Shikimate dehydrogenase
gi|152025516|gb|ABS23286.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 161/280 (57%), Gaps = 28/280 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ +G + + LV++ + + + + +G + T
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A +K DE+D +AK IGAVN ++ R +GKL GYNTD +G + +++ +
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQ-------AI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
S L K +++GAGGA +A+ A G + + IANRT + A++L E V
Sbjct: 114 S---KEPLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERVVS 170
Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
ALSL EN++ +L TT+IGM P V TP+ +L A+V D +Y P
Sbjct: 171 KALSLEKATEAQENYD-----VLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
T+ L +A+ SGA + +G++MF+ Q +E +TG+ +N
Sbjct: 226 TKFLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDIN 265
>gi|229086905|ref|ZP_04219064.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
gi|228696415|gb|EEL49241.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
Length = 277
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 161/274 (58%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF++ + + LV+++A + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFENCSIDAHYHAFLVEEMALGEAVKGLKALGVSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK + +K DE+D +AK IGAVN +++R D KL GYNTD +G + +++ ++
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVQR--DEKLIGYNTDGIGYVRSLQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG---- 426
S L K +++GAGGA +A+ + G + + IANRT ++A +L G
Sbjct: 114 S---KDPLDQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANQLIAGCQGKITS 170
Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
HALSL +N++ I+ +TT+IGM P V TP+ +L +V D +Y P
Sbjct: 171 HALSLEQATEKQKNYD-----IIIHTTTIGMYPHVQSTPLQIQSLKQGTIVSDIIYNPFE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+LL++A+ GA + +G++MF+ Q +E +TG
Sbjct: 226 TKLLQDAKAQGAIVQNGIDMFVYQGALAFEMWTG 259
>gi|253574706|ref|ZP_04852046.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845752|gb|EES73760.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 301
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 146/270 (54%), Gaps = 20/270 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTI 312
+ G+IG P+ HSKSP+++ A ++ G G ++ H+ + + + + + F G + T+
Sbjct: 28 LLGVIGDPIQHSKSPVMHTAALQACGLTGAYLPFHVKGNRLEEAIRGIRALGFRGINVTV 87
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK + D +D A+ IGAVN I+ DG L GYNTD +G I ++++
Sbjct: 88 PHKVEVMNYLDHIDESARLIGAVNTIV--NDDGVLTGYNTDGIGYIRSLKEE-------- 137
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGG----H 427
+ L GK +V+G GGA + + Y + + RV IANRT ++A+ELA G
Sbjct: 138 --AAPELKGKRVLVLGCGGAARGIVYALLQEEPGRVTIANRTGEKAQELAAEWSGLGSLT 195
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+ +L PE +I+ NTTS+GM P V + P+ + +V D +Y P T LL
Sbjct: 196 GCGMDELAEVLPEVDLII-NTTSVGMHPHVSDCPLDARLIPEGIVVSDLIYNPLKTELLV 254
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+AE G TI SGL MFI Q +ER+TGL
Sbjct: 255 QAEAKGCTIHSGLGMFIYQGAYAFERWTGL 284
>gi|336366066|gb|EGN94414.1| hypothetical protein SERLA73DRAFT_114628 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378738|gb|EGO19895.1| hypothetical protein SERLADRAFT_363753 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1617
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 235/517 (45%), Gaps = 74/517 (14%)
Query: 49 GADLVEIRLDGLKN------FNP--------RENIKTLIKESPVPTLFTYRPIWEGGQY- 93
G D +E+R+D L++ F P E + L + + +P +FT R + +GG +
Sbjct: 1106 GVDALEVRVDLLRSPKDFDAFGPYIPPVAYVTEQLAALRRTTSLPIVFTVRTVSQGGSFP 1165
Query: 94 DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ-----Y 148
D E E +L LA+ +GA+YID E+ + + K ++I S H++
Sbjct: 1166 DKAEKEAFHLLNLAVRIGAEYIDAEISWPEKLIKDLVSHK-GSSQIIASWHDWTGKMRWN 1224
Query: 149 TPSVEDLSNLVARIQASGADIVKFATTALDITD-------VARVFQITVHSQVPIIGLVM 201
SV+ ++ AR DIVK A + D V+RV + + PII + M
Sbjct: 1225 EASVKAKYDIAARF----GDIVKIVGKANSVQDNFALYDFVSRVS--SASNAKPIIAINM 1278
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
G G +SRIL + TF + + ++ +APGQ + + + P + F I
Sbjct: 1279 GVEGQMSRILNS------TFSPVSHPLLPTKAAPGQLSYAQIQQALHLLGQLPAQRYF-I 1331
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEA 317
G P+ HS SP L+N F+ +G + L D+ + + +S DF G S TIP K
Sbjct: 1332 FGNPIAHSMSPTLHNTGFEVLGLPHTYQLLETTDVGEGIKAALASPDFGGASVTIPFKLD 1391
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGK-----LFGYNTDYVGAISAIEDGLRGRLNVS 372
+ D++ A++IGAVN I+ R +D L+G NTD++G + ++ R R
Sbjct: 1392 VIPLLDQLSPAAEAIGAVNTIVPRLADASGTNRILYGDNTDWLGIVESV----RSRAPAL 1447
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSL 431
G +AL VIGAGG +A + KA GA+ + + NRT +A+ L + + L
Sbjct: 1448 GAPQAAL------VIGAGGTARAAIFALKALGAQHIYLYNRTAGKAQILVDAFPDAHVEL 1501
Query: 432 ADLENFNPEDGMIL----------ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
+ P +G++ A TT G V P+ +V D Y P
Sbjct: 1502 VERLGIWPGEGLVPSVVVSTVPASATTTEEGSADAV-FLPVSIFDAKLEGVVVDMAYKPA 1560
Query: 482 ITRLLREAEESGA--TIVSGLEMFIGQAYEQYERFTG 516
T LL A+ V G+E+ + Q Y Q+E +TG
Sbjct: 1561 ETPLLALAKRVAPNWATVRGVEVLLEQGYVQFETWTG 1597
>gi|50311867|ref|XP_455965.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74604981|sp|Q6CJC4.1|ARO1_KLULA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49645101|emb|CAG98673.1| KLLA0F19712p [Kluyveromyces lactis]
Length = 1578
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 244/494 (49%), Gaps = 46/494 (9%)
Query: 49 GADLVEIRLDGLKNFNPRENIK--TLIKES--PVPTLFTYRPIWEGGQYDGDENERVD-V 103
G + VE+R+D L +F+ K +L++ + +P +FT R + +GG++ D+ + ++ +
Sbjct: 1090 GCEAVELRVDHLSSFSSDFVTKQISLLRAATKSLPIVFTVRTVSQGGKFQDDDYDLLESL 1149
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTPSVEDLSNLVAR 161
L++A++ +YID+EL + ++ KK K+I S H++ ++ + N +
Sbjct: 1150 LKVALKNAVEYIDLELTLPNNILYNVLNKK-SNTKIIGSHHDFAAKFPWDDAEWENRYNQ 1208
Query: 162 IQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+ DIVKF TA+ D + + + H+ P+I + M E G +SR+L +T
Sbjct: 1209 ALSLDVDIVKFVGTAVSFDDNLALEKFRSTHTLKPLIAINMTETGKLSRVLNNILTP-VT 1267
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMG--PDTKVFGIIGKPVGHSKSPILYNEAFKS 278
L + +APGQ T+ ++ LY+ Q+G P K F +IG P+GHS+SPIL+N ++
Sbjct: 1268 SKLLPSA--AAPGQLTLAEINQLYH--QIGGLPAKKFF-VIGSPIGHSRSPILHNTGYEL 1322
Query: 279 VGFNGVFVHLLVDDIAKF-FQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
+G F +DI + + D G + TIP K + E+ AK+IGAVN
Sbjct: 1323 LGLPHHFDKFETEDIEVVKKELLTREDLGGLAVTIPLKLDIIDSMFELSEAAKTIGAVNT 1382
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G I++ L VS GV S+++G ++IGAGG +A
Sbjct: 1383 VIPLGKN-KFRGDNTDWLG----IKNSL-----VSNGVPSSVSGSAGLIIGAGGTSRAAI 1432
Query: 398 YGAKAKGARVV-IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK 456
Y K G + + NRT ++ ++L + +E+ + + + ++ P
Sbjct: 1433 YALKQIGCDTIYMLNRTTEKLQKLKSEF-SEEYKIVVVESAEQTESIKEQVSVAVSCVPA 1491
Query: 457 VDETPIPKHALGHY-------------ALVFDAVYTPKITRLLREAEES-GATIVSGLEM 502
+ P+ L + DA Y P +T +++ A + IV G EM
Sbjct: 1492 --DKPLDPELLNKLERLLAKGTNSSFKPTLLDAAYKPSVTPIMKLARDKFNWNIVPGAEM 1549
Query: 503 FIGQAYEQYERFTG 516
+ Q EQ+ ++TG
Sbjct: 1550 LVHQGVEQFSKWTG 1563
>gi|228993077|ref|ZP_04153000.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228999127|ref|ZP_04158709.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228760744|gb|EEM09708.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228766725|gb|EEM15365.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 277
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 155/269 (57%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK + +K DE+D +AK IGAVN ++ R DGKL GYNTD +G + +++ ++
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S L K +++GAGGA +A+ + G + + IANRT ++A L S
Sbjct: 114 S---KEPLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A LE E G I+ +TT+IGM P + TP+ +L +V D +Y P T+LL+
Sbjct: 171 QALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQ 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A+ GA + +G++MF+ Q +E +TG
Sbjct: 231 DAKAKGAIVQNGIDMFVYQGALAFELWTG 259
>gi|50555858|ref|XP_505337.1| YALI0F12639p [Yarrowia lipolytica]
gi|74632651|sp|Q6C1X5.1|ARO1_YARLI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49651207|emb|CAG78144.1| YALI0F12639p [Yarrowia lipolytica CLIB122]
Length = 1556
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 40/496 (8%)
Query: 47 ASGADLVEIRLDGLKNFN---PRE-----NIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
+ G +E+R+D L + P E + L + +P L+T R +GG++ D+
Sbjct: 1066 SEGCSALELRVDLLNENDEAIPSEEYVLSQLAILRQNVDLPILYTVRTKAQGGRFPDDKP 1125
Query: 99 -ERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTPSVEDL 155
E +++ L ++ + +DVEL E S+ G K++ S H++ S +
Sbjct: 1126 VELANLVNLGLKTAVELLDVELTYPAELVSSV-GASRGYTKLLGSHHDFPGALNWSSLEW 1184
Query: 156 SNLVARIQASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERGLISRILCA 213
N+ AR +A D+VK A +D F+ H+ P++ + MG G +SR+
Sbjct: 1185 ENMYARAEAVPVDVVKLVGMAKSFSDNFALENFR-EAHTSSPLLAINMGSHGQLSRVT-- 1241
Query: 214 KFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILY 272
LT T + + +APGQ +++++ + M F I+G P+GHSKSPIL+
Sbjct: 1242 --NTLLTPVTHADLPVAAAPGQLSVEEINQTRSTIGMFNKNLSFFIVGTPIGHSKSPILH 1299
Query: 273 NEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
N FK +G + DD A + + G S TIP K+ + DEV +
Sbjct: 1300 NTMFKKLGLPYEYSRFKTDDAAAVNAKARALLAQGNLGGISVTIPLKQDIIPFLDEVSPL 1359
Query: 329 AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG 388
A+ IGAVN II +G L G NTD +G ++A+ R +++L K +++G
Sbjct: 1360 AQQIGAVNTII-PGPNGTLKGDNTDILGLVNALT-----RFG-----ANSLDKKTALIVG 1408
Query: 389 AGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG-HALSLADL--ENFNPEDGMI 444
AGG A +G ++ G A+++IANRT +A +A+ A++L + P +
Sbjct: 1409 AGGTSLAAVHGLRSLGFAKILIANRTLSKAEAIADKFDNVEAVTLDSFVANKYTPSVIVS 1468
Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE-SGATIVSGLEMF 503
T+ M + ++ A LV +A Y+ + T LL++ + G +SGL M
Sbjct: 1469 CVPATTFSMLDESNKLVSAALAASPKGLVLEAAYSAEATPLLKQVMDVEGWEFISGLYML 1528
Query: 504 IGQAYEQYERFTGLPG 519
Q +EQ+ +TG+P
Sbjct: 1529 TEQGFEQFRLWTGIPA 1544
>gi|401624332|gb|EJS42394.1| aro1p [Saccharomyces arboricola H-6]
Length = 1588
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 238/511 (46%), Gaps = 65/511 (12%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATESIPIIFTVRTKKQGGHFPDEEFQTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G ++ID+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YNIALKNGVEFIDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARVFQIT-VHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
D+VKF TA+D D + + H P+I + M +G ISR+L +T
Sbjct: 1218 ALTLDVDVVKFVGTAVDFEDNLSLERFRDTHKSKPLIAVNMTSKGSISRVLNNILTP-VT 1276
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
L N +APGQ TI + +Y G + K ++GKP+GHS+SPIL+N ++ +G
Sbjct: 1277 SDLLPNA--AAPGQLTIAQINKIYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYQILG 1333
Query: 281 FNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI 338
F D ++ K +N+F G + TIP K +K DE+ AK IGAVN +
Sbjct: 1334 LPHKFDKFETDSAELVKEKLLNGNNNFGGAAVTIPLKLDIMKYMDELTDSAKVIGAVNTV 1393
Query: 339 IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY 398
I + K G NTD++G +A+ + GV ++ +VIGAGG +A Y
Sbjct: 1394 IPL-GNNKFRGDNTDWLGIRNAL---------IGNGVPESVGHTAGLVIGAGGTSRAAIY 1443
Query: 399 GAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV 457
+ G ++ I NRT + + L E++ P D I+ T+ M+
Sbjct: 1444 ALHSLGCKKIFIINRTASKLKPLIESL--------------PSDFNIIGIETAESMEEIK 1489
Query: 458 D-----------ETPIPKHALG----------HYALV---FDAVYTPKITRLLREAEES- 492
+ + P+ LG H A V +A Y P +T ++ +++
Sbjct: 1490 EHVGVAVSCVPADKPLDNELLGKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKY 1549
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
++ G +M + Q Q+E++TG A
Sbjct: 1550 QWHVIPGAQMLVHQGVAQFEKWTGFKAPFKA 1580
>gi|229006675|ref|ZP_04164309.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228754536|gb|EEM03947.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 277
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 155/269 (57%), Gaps = 18/269 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N+AF+ + + + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEYLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK + +K DE+D +AK IGAVN ++ R DGKL GYNTD +G + +++ ++
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
S L K +++GAGGA +A+ + G + + IANRT ++A L S
Sbjct: 114 S---KEPLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITS 170
Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A LE E G I+ +TT+IGM P + TP+ +L +V D +Y P T+LL+
Sbjct: 171 QALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIQSLKQGTIVSDIIYNPFETKLLQ 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A+ GA + +G++MF+ Q +E +TG
Sbjct: 231 DAKAKGAIVQNGIDMFVYQGALAFELWTG 259
>gi|295706669|ref|YP_003599744.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294804328|gb|ADF41394.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 279
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 160/279 (57%), Gaps = 33/279 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGF 308
+ ++G++G P+GHS SP++ N+AFK + + + ++ + F++ + GF
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPV--HFESAIGELKDKNIQGF 59
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
+ TIP+K +K DEVD +AK+IGAVN ++++ DG+ GYNTD G ++++ + G
Sbjct: 60 NVTIPYKVDIMKHLDEVDPLAKAIGAVNTVVKQ--DGRYIGYNTDGEGYVTSLLKAVEG- 116
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA--NRTYDRA----RELAE 422
+L+ K ++IGAGGA KA+ Y A+ A VIA NRT ++A EL
Sbjct: 117 ---------SLSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAVLANELPF 167
Query: 423 TVGGHALSLAD----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ A+S++D L+ F+ I+ NTTS+GM P VDE P+ L A+V D +Y
Sbjct: 168 STKTAAMSISDAEKQLDTFD-----IIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIY 222
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P T+LL+EAE GA +G+ MF+ Q +E++T +
Sbjct: 223 NPLKTKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNV 261
>gi|56963403|ref|YP_175134.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
gi|81600933|sp|Q5WHI2.1|AROE_BACSK RecName: Full=Shikimate dehydrogenase
gi|56909646|dbj|BAD64173.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
Length = 275
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 15/268 (5%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+ FG+IG P+GHSKSP+++ A+K +G + V+ + ++ +T + GF+
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK A + DE+D A+++GAVN ++ + DG+ G NTD G I ++ L
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESL-------LP 112
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
V +L G+ +VIGAGGA +A+ + + A + ++NRT ++A+ELA+ +
Sbjct: 113 VVS--DQSLTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLTIE 170
Query: 431 LADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
L G +L NTTS+GM P + PI L +V D +Y P T LL+E
Sbjct: 171 AIPLNEAESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYETALLQE 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A++ G I++G+ MF+ Q E +TG
Sbjct: 231 AKQRGNRILNGIGMFVNQGALSIEHWTG 258
>gi|300087348|ref|YP_003757870.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527081|gb|ADJ25549.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 276
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 138/258 (53%), Gaps = 16/258 (6%)
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAV 319
PV HS SP ++N A +G + V++ V +A + G + TIPHK AA+
Sbjct: 15 PVAHSVSPAMHNAAIDRLGLDYVYLAFRVTPAGLAGALNGVRALGIRGVNLTIPHKTAAL 74
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
DEVD A+ +GAVN ++ G+L GYNTD G ++A++ A
Sbjct: 75 GLLDEVDEAARRVGAVNTVV--NDAGRLTGYNTDIAGFLAALKKH-----------GFAP 121
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
AG+ VV+GAGGA +A+ + + GA VVIANR+ ++A LA G A+S + E
Sbjct: 122 AGQKAVVLGAGGAARAVVFALRDAGAEVVIANRSIEKADTLAADTGATAVSTTETELQKA 181
Query: 440 EDGM-ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
DG +L N T +G+ P TP+P L VFD +Y P+ TRLL EAE +G ++
Sbjct: 182 LDGAGLLVNATPVGLFPDTGVTPVPGSLLHPGLTVFDTIYRPRRTRLLTEAEAAGCRVID 241
Query: 499 GLEMFIGQAYEQYERFTG 516
GL+M + Q +E +TG
Sbjct: 242 GLDMLVEQGATAFELWTG 259
>gi|20093557|ref|NP_613404.1| shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
gi|24211502|sp|Q8TZ24.1|AROE_METKA RecName: Full=Shikimate dehydrogenase
gi|19886404|gb|AAM01334.1| Shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
Length = 290
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 23/276 (8%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T V G+IG PV HS SP ++N AFK +G N V++ V + + + + G +
Sbjct: 10 ETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIVGLN 69
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKEA ++ CDE+D A+ IGAVN + R S GK+ G+NTD G + A+ +
Sbjct: 70 VTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRALRE--ETYF 125
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAR----ELAETV 424
+ G S V++GAGGA +A+++ +GA +VIANRT DRA EL E V
Sbjct: 126 DPRGTKS--------VILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLAEELKEKV 177
Query: 425 GGHALSLA-DLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTP 480
G A ++ D + E D +L + T +GM P DE P+ H L+ D VY P
Sbjct: 178 GVKARAIGLDGDEIERELRDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIVNDLVYNP 237
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRLL EAE++GAT VSG+ M + Q +E +TG
Sbjct: 238 PRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTG 273
>gi|294501322|ref|YP_003565022.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294351259|gb|ADE71588.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 279
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 159/279 (56%), Gaps = 33/279 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGF 308
+ ++G++G P+GHS SP++ N+AFK + + + ++ + F++ + GF
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPV--HFESAIGELKDKNIQGF 59
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
+ TIP+K +K DEVD +AK+IGAVN ++ + DG+ GYNTD G ++++ + G
Sbjct: 60 NVTIPYKVDIMKHLDEVDPLAKAIGAVNTVVNQ--DGRYIGYNTDGEGYVTSLLKAVEG- 116
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA--NRTYDRA----RELAE 422
+L+ K ++IGAGGA KA+ Y A+ A VIA NRT ++A EL
Sbjct: 117 ---------SLSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAILANELPF 167
Query: 423 TVGGHALSLAD----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ A+S++D L+ F+ I+ NTTS+GM P VDE P+ L A+V D +Y
Sbjct: 168 STKTAAMSISDAEKQLDTFD-----IIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIY 222
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P T+LL+EAE GA +G+ MF+ Q +E++T +
Sbjct: 223 NPLKTKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNV 261
>gi|315040954|ref|XP_003169854.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
gi|311345816|gb|EFR05019.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
Length = 1571
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 236/520 (45%), Gaps = 78/520 (15%)
Query: 44 KANASGADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY 93
+A + G+D VE+R+D LK+ + E I L + +P +FT R +GG +
Sbjct: 1070 QAASFGSDAVELRVDLLKDPSSTSGIPSVNYVAEQISFLRSQVSLPLIFTIRTKAQGGLF 1129
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYT 149
D +E + + +LA+ +G+++ID+E+ F D++ E K+I S H+
Sbjct: 1130 PDNAFDEALGLYKLAIRMGSEFIDLEIS----FPDNLLHVVTEMKGFSKIIASHHDVNGQ 1185
Query: 150 PSVEDLSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGER 204
S + S + +A D++K A + D + Q ++ VPII + MG++
Sbjct: 1186 LSWSNGSWIQYYNKALQHGDVIKLIGVAKSLDDNLSLKQFKSWAEKSYPVPIIAINMGDK 1245
Query: 205 GLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKP 262
G +SRIL GF+T +APGQ + K++ MG D K F + GKP
Sbjct: 1246 GRLSRIL----NGFMTPVSHPALPFKAAPGQISAKEIRQALTL--MGELDAKKFALFGKP 1299
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
+ S+SP L+N F GF + L DD+ + S +F G S TIP KE ++
Sbjct: 1300 ISASRSPALHNTLFAQAGFPHEYGRLETDDVGDVKEFIRSEEFGGASVTIPLKEHIMELL 1359
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
DE+ AK IGAVN I+ +G KL G+NTD+ G ++D G + + G S+
Sbjct: 1360 DEISPEAKIIGAVNTIVPAFEEGKKSRKLVGFNTDWQGMARCLKDA--GAMYLKKGESA- 1416
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
++IG+GG +A Y + G + VG +LA L +
Sbjct: 1417 ------LIIGSGGTARAAIYSLHSMGYSPIY-------------LVGRTPANLAKLGSSF 1457
Query: 439 PE--DGMILANTTSIGMQPKVDETPIP-------------------KHALGHYALVFDAV 477
P + ++ + S+ + PKV + IP ++ D
Sbjct: 1458 PAGYNVQVVEDIKSVKIAPKVAISTIPGDQEIVNPLRDLITLIMNKGQEDSAECIILDMA 1517
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T + + A +G IV GLE+ + Q Q+E +TGL
Sbjct: 1518 YKPDVTAVAQLASPAGWKIVKGLEVLVAQGVYQFEHWTGL 1557
>gi|298675580|ref|YP_003727330.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
gi|298288568|gb|ADI74534.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
Length = 275
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 148/269 (55%), Gaps = 22/269 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN--DFAGFSCTI 312
VFG+ G PV HS SP ++N AF +G + ++ VD + + +N F G + T+
Sbjct: 4 VFGVFGDPVEHSLSPDMHNAAFSELGMDSIYHAFRVDKKSLEYALNGANAMGFGGVNITV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
P K+ A+K + D +A IGAVN I R ++D + GYNTD VGA AI D
Sbjct: 64 PLKQEALKFVN-TDPLASKIGAVNTIDFRNEND--MIGYNTDGVGARRAIADA------- 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGH 427
GV + K +++GAGGA +A+ + GA ++IANRT +A ELAE V
Sbjct: 114 --GVD--VKNKNILILGAGGASRAICFQFANDGADLIIANRTESKALELAEDVKSVGNAR 169
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+ ++LE E IL NTT++GM P +T I + +VFD VY P TRLL+
Sbjct: 170 GIGFSNLEELIAESD-ILINTTTVGMHPNTKDTIITSEHMHSGLVVFDIVYNPLETRLLK 228
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+ +GA V+GL MF+ Q E ++ +TG
Sbjct: 229 EAKSAGAIPVNGLMMFVYQGAEAFKIWTG 257
>gi|384495000|gb|EIE85491.1| hypothetical protein RO3G_10201 [Rhizopus delemar RA 99-880]
Length = 1571
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 226/494 (45%), Gaps = 47/494 (9%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQY-DGDE 97
GAD VE+R+D LK +E I L + +P +FT R + G + D DE
Sbjct: 1081 GADAVELRVDLLKKPEEKEGISDIEYVGEQLALLRRTVSIPVIFTVRSKSQAGAFSDNDE 1140
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ-YTPSVEDLS 156
++LR G +YIDVE+ + + + +K E+ +I S H+ Q TP
Sbjct: 1141 EGMFELLRWGQRWGCEYIDVEICWNAQTIEKLVAQK-EESLIISSWHDVQKVTPWDGKAI 1199
Query: 157 NLVARIQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAK 214
+ A DI+K A I D ++ F+ + +I + MG G +SR+L
Sbjct: 1200 ETKYELAAKYGDIIKLVGVAETIQDNFKLETFRASKQDGKNLIAINMGAAGQLSRVLNEC 1259
Query: 215 FGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
+T L +APGQ ++ ++ + + P + F +IG P+ HS SP L+N
Sbjct: 1260 LTP-VTHPALPQK--AAPGQLSLAEINKTRHLIGLLP-AQSFWLIGTPIQHSMSPTLHNT 1315
Query: 275 AFKSVGFNGVFVHLLVDDIAKFFQTYSSND--FAGFSCTIPHKEAAVKCCDEVDTVAKSI 332
F+++G + LL + ++ + D F G S TIPHK + +K DEV AK I
Sbjct: 1316 GFQTLGLPHHY-GLLECHMVEYAEDAILKDPSFGGASVTIPHKVSVMKYLDEVTENAKMI 1374
Query: 333 GAVNCIIRRQS------DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
GAVN + R++ + G NTDY+G I+ + N + +V
Sbjct: 1375 GAVNTVFVRETVVNGEKKRQFIGENTDYLGMKHRIQALMMDPNN---------PPEEGLV 1425
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGM 443
IGAGG +A Y + G ++ + NRT +A +L + G + LEN G+
Sbjct: 1426 IGAGGTARAALYTMQKMGIQKIYLWNRTSSKAYDLQKAFKGFIEIEVIESLENSKIGPGV 1485
Query: 444 ILANTTSIGMQPKVDETPIPKHALGHY-ALVFDAVYTPKITRLLREAEESGATIVSGLEM 502
I++ P IP H G ++ D Y P+ T+LL +A+ G + V G+E+
Sbjct: 1486 IISTV------PADSGIEIPAHLYGGIKGIICDMAYKPRRTKLLLQADRKGWSCVEGIEV 1539
Query: 503 FIGQAYEQYERFTG 516
I Q Q+E +TG
Sbjct: 1540 LISQGIAQFEIWTG 1553
>gi|319651634|ref|ZP_08005761.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317396701|gb|EFV77412.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 151/271 (55%), Gaps = 21/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG P+ HS SP ++N+ F + + + H+ +++ + + AGF+ T
Sbjct: 3 KLFGVIGDPISHSMSPAMHNDLFAAYSLDAHYQAFHISRENLTDAIIGFRAMGIAGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHKEA + DE+D +A++IGAVN ++ + GKL GYNTD G + +G LN
Sbjct: 63 VPHKEAIIPLLDELDPLAEAIGAVNTVVNQT--GKLIGYNTDGSGYV-------KGLLNQ 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAET----VGG 426
++ K +++GAGGA +A+ + +G ++ I NRT RA ++ V
Sbjct: 114 K----QSIKDKKVLIVGAGGAARAIYFTIAKEGPELLDICNRTPKRAEQIINDCPFRVPA 169
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS D E + E ++ TTSIGM P++ ++P+ H L A V D +Y P T+LL
Sbjct: 170 RVLSRPDAEG-SLETYDLIVQTTSIGMHPEIGQSPLSVHKLKPGAFVSDIIYNPLETKLL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
EA E GA I +G++MF+ Q +E +TG+
Sbjct: 229 TEAAEKGAGIQNGIDMFVYQGALAFEMWTGI 259
>gi|418120030|ref|ZP_12756981.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|418198134|ref|ZP_12834594.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
gi|353789143|gb|EHD69539.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|353862772|gb|EHE42702.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
Length = 506
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 242/519 (46%), Gaps = 60/519 (11%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-----KESPVPT 80
+ V +M S+++ +G AD++E R D L P+E I + K +
Sbjct: 3 LIVSVMPRSLEEAQA-LGATRYLDADIIEWRADYL----PKEAILQVAPAIFEKFAGREL 57
Query: 81 LFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
+FT R EGG+ D E + +++ +A DYID E ++ + + + +
Sbjct: 58 VFTLRTRSEGGEIDLSPEEYIHLIKEVAQFYQPDYIDFEYYSYKDVFEEML----DFPNL 113
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTA------LDITDVARVFQITVHSQ 193
++S HN+Q TP E++ +++ + +VK A A LD+ + R F+ T++ +
Sbjct: 114 VLSYHNFQETP--ENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFK-TLNPE 170
Query: 194 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF-RQMGPD 252
+ + MG+ G +SRI G +F +L+ VSAPGQ ++ + F ++
Sbjct: 171 QEYVTISMGKVGKVSRITADVTGSSWSFASLDE--VSAPGQISLASMKKSGRFWMKLDGY 228
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T++ ++ P+ HS SP ++N AF++ NG +V ++ D+A+ G +
Sbjct: 229 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 288
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+KE + D++ A+ IGAVN ++ +G L GYNTD G +
Sbjct: 289 SMPYKEQVIPYLDKLSDEARLIGAVNTVVNE--NGNLIGYNTDGKGFFKCLP-------- 338
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-------ARVVIANRTYDRARELAET 423
S ++GK ++GAGGA K++ A G R V +T +L E
Sbjct: 339 -----SFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQ 393
Query: 424 VGGHALSLADLENFNPEDGMI-----LANTTSIGMQPKVDETPIPKHA-LGHYALVFDAV 477
G + L LEN + I L N TS+GM + +P+P+ L LV D +
Sbjct: 394 T-GFKVDLYALENVSELQARIVESDLLVNATSVGMDGQ--SSPVPESINLPETILVADII 450
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
Y P T L+ A G V+GL M + QA E ++ +TG
Sbjct: 451 YQPFETPFLKWARSQGKPAVNGLGMLLYQAAEAFQLWTG 489
>gi|336476220|ref|YP_004615361.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
gi|335929601|gb|AEH60142.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
Length = 272
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 149/275 (54%), Gaps = 22/275 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
KVF + G PV HS SP+++N A +GFNGV+ V D+ + F G + T
Sbjct: 2 KVFAVFGDPVKHSLSPMMHNAAMLELGFNGVYHAFQVKSSDLRDAIYGAKAMGFGGVNLT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHKE A++ D +A IGAVN I R+ + GYNTD +GA+ + D N
Sbjct: 62 VPHKEKALEFI-RPDPLAAKIGAVNTIDFREG---ITGYNTDGIGALRTLLDSGIDIRNA 117
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GH 427
S +++GAGGA +A+++ ++GA + IANRT +RA +LAE V
Sbjct: 118 S-----------VLIVGAGGAARAISFQLASEGAHITIANRTQERALKLAEEVNEVGRAK 166
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L DL+N E IL NTT++GM P VD+T + VFD VY P T+LL+
Sbjct: 167 GAGLEDLKNLIKE-ADILINTTTVGMYPAVDDTIATADMMHPDLTVFDIVYNPLETKLLK 225
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
EA+++G+ ++G+ M + Q E +E +T + +N
Sbjct: 226 EAKKAGSNAINGVMMLVYQGAEAFEIWTDIRPPVN 260
>gi|116204841|ref|XP_001228231.1| hypothetical protein CHGG_10304 [Chaetomium globosum CBS 148.51]
gi|88176432|gb|EAQ83900.1| hypothetical protein CHGG_10304 [Chaetomium globosum CBS 148.51]
Length = 1464
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 234/507 (46%), Gaps = 74/507 (14%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++F+P + L + VP ++T R + +GG++ D D + +
Sbjct: 977 GSDAVELRVDLLESFDPEFVARQVSLLRSAAKVPIVYTVRTVSQGGKFPDDDYTLALQLY 1036
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
+ + G +Y+D+E+ + + D++ K ++I S H+ Q +++
Sbjct: 1037 HIGLRTGVEYLDLEMTMPADILDAVAESK-GFTRIIASHHDPQ------------SKLSW 1083
Query: 165 SGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLT-FGT 223
++F AL D+ ++ ++ VPII L MG G +SR+L GF+T
Sbjct: 1084 RNGSWIQFYNKALQYGDIIKLTKMLAAHDVPIIALNMGHAGKLSRML----NGFMTPVSH 1139
Query: 224 LENGIVSAPGQPT---IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
E +APGQ + I+ L L ++ P + F + GKP+ S+SP L+N F + G
Sbjct: 1140 PELPAKAAPGQLSATEIRQALSLIG--ELEP--RSFYLFGKPISSSRSPALHNTLFGAAG 1195
Query: 281 FNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIR 340
+ + D+ + S F G S TIP K + D + A+SIGAVN II
Sbjct: 1196 LPHSYSNFETDNASDVQDLIRSPHFGGASVTIPLKLDIMPLLDSISDAARSIGAVNTIIP 1255
Query: 341 RQSDGK----LFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKA 395
S L G NTD++G + ++ GL R S G + +V+G+GG +A
Sbjct: 1256 VPSATGDKPILLGDNTDWMGMVFSLRSAGLVQRTAASPGAA--------MVVGSGGTTRA 1307
Query: 396 LAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF-NPEDGMILANTTSIGM 453
Y + G A + + R +R +E+++ D+++ PE+ +A ++
Sbjct: 1308 AIYALHSLGYAPIYLVARAPERVKEISDGFPAD----YDIQHLATPEEAAAVAGRDAL-- 1361
Query: 454 QPKVDETPIPK-----------------------HALGHYALVFDAVYTPKITRLLREAE 490
P V + IP G ++ + YTP+ T L++ AE
Sbjct: 1362 -PGVVISTIPADKPIDSGMREVLVAALQSGGASGQTKGEPRVLLEMAYTPRHTPLMQLAE 1420
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
++G T + GLE+ Q + Q++ +TG+
Sbjct: 1421 DAGWTTIPGLEVLAAQGWYQFQLWTGI 1447
>gi|310643105|ref|YP_003947863.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|309248055|gb|ADO57622.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|392303905|emb|CCI70268.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 289
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 155/295 (52%), Gaps = 25/295 (8%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
D + G++G P+ HSKSP+++ A ++ G +G FV H+ D + + + F G +
Sbjct: 12 DLVLLGVLGDPIKHSKSPLMHKIALQAAGVDGDFVPLHVTPDQLEDAVKGIRALHFRGVN 71
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK +K DE+D A+ IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 72 VTIPHKVEIMKYLDEIDEGARLIGAVNTIV--NDNGRLKGYNTDGIGYVRSLKEE----- 124
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHA 428
S L G V+GAGGA + + + + + V+I NRT D+A +LA A
Sbjct: 125 -----TSVELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEA 179
Query: 429 LSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
+ + N + + +L NTTS+GM P DE P+ + +V D +Y P TR
Sbjct: 180 IPVMGYSNEEARNVLTTVDVLINTTSVGMSPLSDELPVETSLIPEGIIVSDLIYNPLETR 239
Query: 485 LLREA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFN 538
LLRE+ E+ G T+ GL MF+ Q +E FTG+ AP + + +L S +
Sbjct: 240 LLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGV-----APAVDQMRAAVLRSLS 289
>gi|433444334|ref|ZP_20409253.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
gi|432001626|gb|ELK22499.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 150/268 (55%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG PV HS SP+++N+AF+S+ + + H+ + + Q + AGF+ T
Sbjct: 3 KLFGLIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVQGLKALQCAGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A ++ DE+D AK +GAVN ++ +GK GYNTD G + A+ + ++N+
Sbjct: 63 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCE----QMNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALS 430
L+G ++IGAGGA + + + K + A + + NRT ++A + S
Sbjct: 117 E------LSGARILIIGAGGAARGIYFTLLKHEAAAIDVCNRTMEKAEAFIQKERSAVYS 170
Query: 431 LADLEN-FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
L E D I+ NTTS+GM P VD PI L +V D +Y P +T+ L+EA
Sbjct: 171 LEQAEERLGAYD--IIINTTSVGMYPHVDTMPISLQTLKTGTIVSDIIYNPLMTKFLQEA 228
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
+E GA + +G+ MF+ Q +E++TG+
Sbjct: 229 KEKGARVQNGVGMFVYQGALAFEKWTGI 256
>gi|222618472|gb|EEE54604.1| hypothetical protein OsJ_01835 [Oryza sativa Japonica Group]
Length = 176
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 89/109 (81%)
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
RP WEGGQY+GD+ R + LRLAMELG +Y+D+EL+VA +F I G KPEKCK+IVS+H
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 193
NY+ TPS E+L++LVARIQA GADIVK ATTA DI DV+++FQ+ VH Q
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQ 112
>gi|430750627|ref|YP_007213535.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
gi|430734592|gb|AGA58537.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
Length = 294
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 146/273 (53%), Gaps = 22/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T ++G+IG P+ HSKSP++ + AF+ G N V++ H+ + +A F + + GF+
Sbjct: 17 TVLYGVIGDPIRHSKSPVMLSRAFRETGVNAVYLAFHVTAERLAAFAEGARAMGMGGFNV 76
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK A + DE+D A++ GAVN ++RR+ KL GYNTD +G + ++++
Sbjct: 77 TIPHKTAIMAHLDEIDPTAEAAGAVNTVVRRED--KLIGYNTDGIGYVRSLKE------- 127
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRT----YDRARELAETVG 425
+ L+G+ VV+GAGGA + + + A K A + + NRT A+ L V
Sbjct: 128 ---EAGAELSGRRIVVLGAGGAARGILHALALEKPAHIAVVNRTAARAEALAQALPADVP 184
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA--LGHYALVFDAVYTPKIT 483
AL DL D I+ NTTS GM P DE P+ A + A+ D VY P T
Sbjct: 185 KAALGPDDLREAC-ADADIVINTTSAGMSPNTDELPLGIDASWMKPGAVASDIVYNPMRT 243
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
R L EAE +G GL MFI Q +E +TG
Sbjct: 244 RFLEEAERAGCRTHGGLGMFIYQGAYAFEYWTG 276
>gi|110729183|gb|ABG88186.1| CPC-1 [Cucumis sativus]
Length = 130
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 87/117 (74%)
Query: 267 KSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326
K P LYNE FK VG + ++V LLVDD KF TYSS+D GFS TIPHKEA K CDEVD
Sbjct: 1 KLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDEVD 60
Query: 327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
VAK+ GAVN ++RRQSDGKL GYNTD GAISAIEDGL G N S VSS LAGKL
Sbjct: 61 PVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGLLGLHNDSFAVSSRLAGKL 117
>gi|348687600|gb|EGZ27414.1| pentafunctional aromatic amino acid protein [Phytophthora sojae]
Length = 1548
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 233/490 (47%), Gaps = 38/490 (7%)
Query: 49 GADLVEIRLDGLKNFNPRE------NIKTLIKESPVPTLFTYRPIWEGGQY-DGDENER- 100
GAD +E+R+D LK P++ + L S +P +FT R +GG + DG+E+E+
Sbjct: 1042 GADALELRVDLLKY--PQDTKFVASQVALLRSLSTLPIIFTVRSKGQGGAFPDGEEHEQK 1099
Query: 101 -VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLV 159
++L+L + LG +++DVE +R+ + + + + +I S H Q S + + +
Sbjct: 1100 MFELLQLGVRLGCEFVDVETCWSRKAREHLLAHR-HRSAIISSFHAVQKPTSEAETTAIF 1158
Query: 160 ARIQASG-ADIVKFATTALDITD------VARVFQITVHSQVPIIGLVMGERGLISRILC 212
+ G IVK A D VA+ F Q+PII L E G ++R+L
Sbjct: 1159 NECYSRGNVQIVKVVVKAYSPQDALMVDRVAKDFAKAWQQQMPIISLCTTEAGKLTRMLN 1218
Query: 213 AKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILY 272
+T L +APGQ ++++++ L + P + F + G P+ S SP ++
Sbjct: 1219 RTLTP-VTHPLLPAA--AAPGQLSVEEIMTLRKQLGLLPAREFF-LFGSPIQKSPSPAMH 1274
Query: 273 NEAFKSVGFNGVFVHLLVD--DIAKFFQTYSS--NDFAGFSCTIPHKEAAVKCCDEVDTV 328
N F+S +F + L D D+ + Q + F G S TIP K ++ DE+
Sbjct: 1275 NAGFESTSLASLFTYGLHDTADVVEIVQRMQAPGTTFGGGSVTIPLKVDIMEHLDELSPA 1334
Query: 329 AKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
AK+IGAVN I+R +G + G NTD++G + I L L+V + A +V
Sbjct: 1335 AKAIGAVNTIMREDRNGSPYWKGDNTDWLGILRPISKRL-ATLSVRKPAAELTA----LV 1389
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMIL 445
+GAGG A +Y + G ++ I NRT ++A+ +A ALS + D ++
Sbjct: 1390 VGAGGTSMAASYAMRQLGVGKLFIFNRTLEKAQAVAARFDAEALSELTPDTLAQVDVVVG 1449
Query: 446 ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI-VSGLEMFI 504
G Q + + + A G +V DA Y P IT +L A +G + + G EM
Sbjct: 1450 TIPAQAGFQ--LPDYLVAPRADGGKVVVLDAAYMPPITPMLAHAHAAGGAVCIQGYEMLY 1507
Query: 505 GQAYEQYERF 514
Q EQ+ R+
Sbjct: 1508 EQGIEQFYRW 1517
>gi|449541458|gb|EMD32442.1| hypothetical protein CERSUDRAFT_161831 [Ceriporiopsis subvermispora
B]
Length = 1621
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 233/508 (45%), Gaps = 56/508 (11%)
Query: 48 SGADLVEIRLDGL---KNFNP-----------RENIKTLIKESPVPTLFTYRPIWEGGQY 93
+G D VE+R+D L K+F+ + + L ++ +P +FT R + +GGQ+
Sbjct: 1114 AGVDAVELRVDLLRSPKDFDKLGPYVPSVAYVTDQVAALRSKTDLPIVFTVRTVSQGGQF 1173
Query: 94 DGD-ENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSV 152
D E E + A+ LG +Y+DVE+ + + + +K +++ S H++ +
Sbjct: 1174 PDDAEKEAFTLFHTAIRLGVEYVDVEITWSEKSIQDLVVRK-GHSQIVASWHDWSGNMAW 1232
Query: 153 E-DLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV-----PIIGLVMGERGL 206
+ + RI + DIVK A ++ D +++ + PII + MG G
Sbjct: 1233 DGKVVEAKYRIAHAFGDIVKLVGKANELDDSLALYRFVQRMRASSDAKPIIAINMGTEGQ 1292
Query: 207 ISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+SRIL + TF + + ++ +APGQ + + N P + F + G P+
Sbjct: 1293 LSRILNS------TFSPVSHPLLPSKAAPGQLSFAQIQTALNLIGQLPARRFF-LFGNPI 1345
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
HS SP L+N F+ +G + L + I + T +S+DF G S TIP K + D
Sbjct: 1346 KHSMSPTLHNTGFEILGLPHKYELLETETIGEIKATLASSDFGGASVTIPFKLDVLPLLD 1405
Query: 324 EVDTVAKSIGAVNCII-RRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
+ A++IGAVN II +R++DG L+G NTD++G +I + +S
Sbjct: 1406 ALSPEAEAIGAVNTIIPQRKADGSCILYGDNTDWLGISRSIRTAMP---------TSMKH 1456
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNP 439
+ +VIGAGG +A Y G R+ + NRT A LA + + + P
Sbjct: 1457 PEAALVIGAGGTSRAAIYALHKLGVQRIYLFNRTRRSAEVLANAFPDVEVEILETLGTWP 1516
Query: 440 EDG---MILANT---TSIGMQPKVDET---PIPKHALGHYALVFDAVYTPKITRLLREAE 490
G I+ +T ++ P V PI +V D Y P T LL AE
Sbjct: 1517 AGGPAPTIIVSTVPASATTTDPSVKNALYLPISMFESATGGVVVDMAYKPAETPLLALAE 1576
Query: 491 ESGAT--IVSGLEMFIGQAYEQYERFTG 516
G V G+++ + Q YEQ++ +TG
Sbjct: 1577 NQGDQWKTVKGVQVLLEQGYEQFQLWTG 1604
>gi|354582185|ref|ZP_09001087.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
gi|353199584|gb|EHB65046.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
Length = 284
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 26/286 (9%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
Q G D G++G P+GHSKSP ++N A ++ G ++ H+ + + ++ + F
Sbjct: 5 QAGTDYLKLGVMGDPIGHSKSPAMHNAALAALNLQGAYIPLHIRPERLGDAIESVKTLGF 64
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHK ++ D +D A IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 65 RGVNVTIPHKVEVMRYLDAIDEGAARIGAVNTIV--NDNGRLTGYNTDGIGYVRSLKEE- 121
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETV 424
L GK V+GAGGA + + Y + + I NRT D+A+ LA+
Sbjct: 122 ---------ACPDLKGKRIAVLGAGGAARGIIYALIGEQPESISIINRTEDKAKALAQEW 172
Query: 425 GGHALSLADLENFNPEDGM-------ILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G ++A+L E ++ NTTS+GM P++ E P+ + A+V D +
Sbjct: 173 G----TMAELHGCGEEHAKEVLSRAEVIINTTSVGMHPRISEMPVHPEWIPEGAVVSDLI 228
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
Y P T LL ++E+ T+ GL MFI Q E +TGL + A
Sbjct: 229 YNPLKTELLLQSEQRNCTVHGGLGMFINQGAYALEYWTGLRAPVEA 274
>gi|326390171|ref|ZP_08211732.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325993819|gb|EGD52250.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 292
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 26/299 (8%)
Query: 237 IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIA 294
+K L D+ ++ TK++G+IG PV HS SP+++N AFKS+ N V+ +L + +
Sbjct: 3 LKGLRDM----EINSSTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTAFDVLPEKLE 58
Query: 295 KFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDY 354
+ + GF+ T+PHKE +K D V A IGAVN ++ G L GYNTD
Sbjct: 59 DAVKGAKALGIKGFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV 116
Query: 355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413
G I ++ + V + G+ VV+GAGGA KA+ KG ++IANR+
Sbjct: 117 YGFIDSLTE-----------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRS 165
Query: 414 YDRARELAETVGGHALSLADLENFN-----PEDGMILANTTSIGMQPKVDETPIPKHALG 468
+RA++L+E + D + N PE M L NTTS+GM P V+++P+ + +
Sbjct: 166 VERAKDLSEYIKREFKVQCDYCSINEVEEIPEIAM-LVNTTSMGMYPNVEDSPVSERVVS 224
Query: 469 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLY 527
V+D +Y P T L+ A+++G +GL M + QA ++ +TG N ++Y
Sbjct: 225 KAKFVYDLIYNPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGEFFDKNLVYMY 283
>gi|452994696|emb|CCQ93699.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 287
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 144/276 (52%), Gaps = 18/276 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T ++G+ G PV HS SP++ AF GFN V++ + + + + + + G +
Sbjct: 11 TSLYGLFGNPVAHSLSPVMQQAAFMERGFNAVYLAFAIQKEKLKEAVEAIRALSIQGVNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP+K + DEV+ A IGAVN I + G+L GYNTD G I ++E+ +
Sbjct: 71 TIPYKVEVIPFLDEVEEEASIIGAVNTI--KNEGGRLRGYNTDGKGFIRSLEEEFHPDWS 128
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-A 428
G ++GAGGA +++A KG R+ I NR ++A ELA + +
Sbjct: 129 SMNGT----------ILGAGGAVRSVAVALARKGVKRITIVNRNREKAEELARLISAWTS 178
Query: 429 LSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ + E + + +L N T IGM P V+ETP+ + AL +V + VYTP TRLL
Sbjct: 179 VQVEGWERLSSTLKGSNLLINGTPIGMHPHVEETPVAQEALHQDLIVSELVYTPLYTRLL 238
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
REA+E GA I GL MF+ Q +E +TG +N
Sbjct: 239 REAKEKGAKIHPGLMMFVYQGAIAFEIWTGKTAPVN 274
>gi|415885593|ref|ZP_11547521.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
gi|387591262|gb|EIJ83581.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
Length = 279
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 150/271 (55%), Gaps = 21/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG P+ HS SP+++N+ F G + + H+ D+ Q + + +GF+ T
Sbjct: 3 KLFGVIGDPISHSMSPVMHNDLFMVYGIDAHYHPFHVKRGDLGAAVQGLKAINCSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + DE+D +A++IGAVN ++ + GKL GYNTD G + +GL+ + V
Sbjct: 63 VPHKTEIMTFLDEIDPLAEAIGAVNTVVHEE--GKLIGYNTDGHGFL----EGLKRKFTV 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
S ++IGAGGA KA+ Y G + + NRT ++A +L E TV
Sbjct: 117 SDSTK-------VLIIGAGGAAKAIFYSMAHAGVKHIDFCNRTAEKAAQLIESCPFTVQS 169
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ + + E +I+ TTS+GM P +D++P+ LG A V D +Y P T +L
Sbjct: 170 NIYTREEAEKRLSSYNLII-QTTSVGMSPNIDDSPLSLENLGTGAFVSDIIYNPLETAIL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
R+A+ GA +GL+MF+ Q +E++TG+
Sbjct: 229 RDAKRRGAGTQNGLDMFVFQGALAFEKWTGI 259
>gi|402219596|gb|EJT99669.1| Pentafunctional AroM protein [Dacryopinax sp. DJM-731 SS1]
Length = 1629
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 228/505 (45%), Gaps = 56/505 (11%)
Query: 49 GADLVEIRLDGLK-NFNPRE------------NIKTLIKESPVPTLFTYRPIWEGGQY-D 94
G D +E+R+D L +P E I L + + +P +FT R +GGQ+ D
Sbjct: 1126 GVDALELRVDLLSPTGSPVERPSVPPSTYVATQIAALRQRTTLPIVFTVRTASQGGQFPD 1185
Query: 95 GDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ-----YT 149
+ E V + LA+ LG +Y+DVE+ + E I +K +I S H++ +
Sbjct: 1186 TAQQEAVKLFELALRLGCEYLDVEISWSEEQIRHIISQKGHS-HLIASWHDWTGAMKWLS 1244
Query: 150 PSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS----QVPIIGLVMGERG 205
P V NL + DI+K TA D D Q+ V S + P++ + MGE+G
Sbjct: 1245 PEVRQKYNLAYEL----GDIIKLVGTARDQADNLD-LQLFVRSIAAGRKPMLAINMGEKG 1299
Query: 206 LISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGH 265
+SRIL F +T L + +APGQ T ++ + P + F + G P+ H
Sbjct: 1300 KLSRILNFVFSP-VTHPLLPSR--AAPGQLTFPEIQRALHLIGHLPKEQ-FYLFGTPISH 1355
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDDI-AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
S SP L+N AF ++G + L D + + ++ +F G S TIPHK A + D
Sbjct: 1356 SMSPTLHNTAFSALGLPHRYDLLETDFVDNRITAAVAAPNFGGASVTIPHKVAIISQLDC 1415
Query: 325 VDTVAKSIGAVNCIIR-RQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
+ A+ IGAVN II R+ DG +L G NTD+ I + L+ NVS G G
Sbjct: 1416 LSEEAQVIGAVNTIIPIRRPDGIRELLGDNTDWAAMHCIIINNLK---NVSPG------G 1466
Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGH-----ALSLADLE 435
+VIGAGGA +A Y G + + NRT A LA + SL L
Sbjct: 1467 ARGLVIGAGGASRAAVYALHRAGIGAIDLFNRTRSSAEALASSFPDDYNIRIMESLEGLG 1526
Query: 436 NFNPEDGMILANTTSIGMQPKV-DETPIPKHALG-HYALVFDAVYTPKITRLLREAEE-- 491
N P + + P V D +P +V D Y P +T LL A
Sbjct: 1527 NSPPSVIISTVPASVTTTDPTVKDALQLPASMFTLSQGVVIDMAYKPSLTPLLNLARSVN 1586
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
T ++GL + + Q Y Q+E +TG
Sbjct: 1587 PSWTPITGLAVLLEQGYRQFELWTG 1611
>gi|374295740|ref|YP_005045931.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
gi|359825234|gb|AEV68007.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
Length = 293
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 154/293 (52%), Gaps = 23/293 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP L+N K +G + ++V L VD D+ + + +F GF+
Sbjct: 11 TKLLGLIGNPVEHSISPQLHNSLSKILGLDLIYVPLRVDKEDLETLVKALKATEFVGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K +K D A +G+VN + ++ DG+L+GYNTD G + A ++
Sbjct: 71 TVPYKREIMKFLDGNTKEAILMGSVNTV--KKIDGRLYGYNTDGEGFLRAFKEA------ 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
+ GK V++GAGGA + +A +GA ++ + NRT ++ ELAE V +
Sbjct: 123 ----AGTDFKGKKVVMLGAGGAARPIAVKIALEGAEKISLVNRTTQKSVELAEVVNENIA 178
Query: 430 SLADLENFNP-------EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
+ + NF E+ I+ NTTS+GM P +D + I + + +V+D +Y P
Sbjct: 179 EIVQVYNFEDKTLKLAFEESDIIINTTSVGMSPDIDNSLISDTSYFNGQIVYDIIYNPVK 238
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP-GKMNAPHLYKFFVLLL 534
T+ L +AE G I++GL M Q YE +TG+ + LY F+ +L
Sbjct: 239 TKFLADAESRGCKIINGLGMLFYQGINAYEIWTGVKISEEILRDLYNSFITIL 291
>gi|336271875|ref|XP_003350695.1| hypothetical protein SMAC_02366 [Sordaria macrospora k-hell]
gi|327507672|sp|D1ZA70.1|ARO1_SORMK RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|380094857|emb|CCC07359.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1563
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 251/506 (49%), Gaps = 63/506 (12%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++++P + + L + +P ++T R + +GG++ D D + +
Sbjct: 1070 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDDDYALALKLY 1129
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
R ++ G +Y+D+E+ + E +++ +K +I S H+ + T S ++ + +A
Sbjct: 1130 RTGLQAGVEYLDLEMTMPDEVIEAVTNEK-GYTHIIASHHDPKATLSWKNGGWIQYYNKA 1188
Query: 165 -SGADIVKFATTALDITD---VARVFQITVHS--QVPIIGLVMGERGLISRILCAKFGGF 218
D+VK A +++D +AR F+ ++ + P IGL MG G +SR+L GF
Sbjct: 1189 LQHGDVVKLVGVARELSDNFALAR-FKASLAAAHDKPFIGLNMGTAGKLSRVL----NGF 1243
Query: 219 LT---FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
LT L + +APGQ + ++ L ++ P + F + GKP+ S+SP L+N
Sbjct: 1244 LTPVSHPALPSK--AAPGQLSAAEIRQALALIGELEP--RSFYLFGKPISASRSPALHNA 1299
Query: 275 AFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
F+ G + D+ A + + DF G S TIP K + DEV AK IGA
Sbjct: 1300 LFRDNGLPHQYSLFETDNAADVKELIRATDFGGASVTIPLKLDIMPLLDEVSDAAKVIGA 1359
Query: 335 VNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA 392
VN II S K L G NTD++G + A+ + G + VS S AG +V+G+GG
Sbjct: 1360 VNTIIPVGSGDKVTLRGDNTDWMGMVYALRNA--GVVKVSK--ESPAAG---MVVGSGGT 1412
Query: 393 GKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFN-PEDGMILANTTS 450
+A Y G A + + R DR + LAE+ D+ + + PE+ + A +T+
Sbjct: 1413 TRAAVYALHDLGFAPIYVVARNADRIKALAESFPAD----YDIRSLSTPEE--VAAESTA 1466
Query: 451 IGMQPKVDETPIPKH-------------ALGHYA------LVFDAVYTPKITRLLREAEE 491
QP V + IP +L H + ++ + YTP+ T L++ AE+
Sbjct: 1467 ---QPSVVISTIPADKPIEQSMREVLVASLRHPSVTNGKHVLLEMAYTPRHTPLMQLAED 1523
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+ + GLE+ Q + Q++ +TG+
Sbjct: 1524 AHWQTIPGLEVLAAQGWYQFQLWTGI 1549
>gi|289578257|ref|YP_003476884.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|297544537|ref|YP_003676839.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289527970|gb|ADD02322.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|296842312|gb|ADH60828.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 284
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 24/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ TK+FG+IG PV HS SP+++N AFKS+ N V+ + + + + +
Sbjct: 2 EINSKTKLFGLIGHPVEHSLSPLIHNYAFKSLNLNYVYTVFDVFPEKLEDAVKGIKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHKE +K D V A IGAVN ++ + G L GYNTD G I ++ +
Sbjct: 62 KGVNVTIPHKEKIIKYLDVVSEEALKIGAVNTLVNEE--GILKGYNTDVYGFIDSLTE-- 117
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAE-- 422
V + GK VV+GAGGA KA+ A K +VIANR ++A+EL+E
Sbjct: 118 ---------VGEKIKGKKAVVLGAGGASKAVCVALALEKINEIVIANRNVEKAKELSEYI 168
Query: 423 ----TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
V + S+ ++E D IL NTTS+GM P V+++P+ + + V+D +Y
Sbjct: 169 KREFKVSCNYCSINEVEKIPEMD--ILVNTTSVGMYPNVEDSPVCEKVVSRAKFVYDVIY 226
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T L+ A+ +G +GL M + QA ++ +TG
Sbjct: 227 NPFETVFLKYAKRNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|315230187|ref|YP_004070623.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
gi|315183215|gb|ADT83400.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
Length = 272
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 158/266 (59%), Gaps = 19/266 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+++G+IGKPV HS SP+++N FK N V++ VDD+ + + +G + T+
Sbjct: 6 TRLYGLIGKPVEHSLSPVIHNALFKRYNINAVYLAFDVDDLESAVKGVKALGISGLNVTM 65
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P+KE ++ DE+ A++IG+VN ++ R+ GKL GYNTD +GA+ A++
Sbjct: 66 PYKEQILEFLDELSEEARAIGSVNTVVNRE--GKLIGYNTDGIGALKALKR--------- 114
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVGGHALSL 431
+ + GK +++GAGGAGKA+AY ++ A+VV+ NRT +A+EL + V G LS
Sbjct: 115 ---FTEVEGKRVLLLGAGGAGKAIAY-TLSRLAKVVVLNRTERKAKELEKFGVKGGKLSK 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+L+ + +++ N TS+GM D +PIPK L +VFD VY+P T LLREA E
Sbjct: 171 ENLKRYLSWADIVI-NATSLGMNE--DRSPIPKGLLRENLVVFDIVYSPLETNLLREARE 227
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
G + GL M I Q E + +TG+
Sbjct: 228 VGCLTIDGLWMLIHQGAESFRLWTGV 253
>gi|212547102|ref|XP_002153704.1| pentafunctional polypeptide (AroM), putative [Talaromyces marneffei
ATCC 18224]
gi|327507643|sp|B6QWH9.1|ARO11_PENMQ RecName: Full=Pentafunctional AROM polypeptide 1; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|210064464|gb|EEA18560.1| pentafunctional polypeptide (AroM), putative [Talaromyces marneffei
ATCC 18224]
Length = 1573
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 239/513 (46%), Gaps = 55/513 (10%)
Query: 41 DMGKANASGADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEG 90
D+ + ASG+D VE+R+D LK+ + E I +P +FT R + +G
Sbjct: 1062 DLLRTVASGSDAVELRVDLLKDPSSGNGIPSAEYVAEQISFYRSRVSLPIVFTIRTVSQG 1121
Query: 91 GQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT 149
G++ D ++ ++++ LA+ G ++ID+E+ + + K K+I S H+ Q
Sbjct: 1122 GKFPNDAHDAALELIMLAIRSGCEFIDLEITFPEDLLRKVAESKAH-AKIIASHHDPQGK 1180
Query: 150 PSVEDLSNLVARIQA-SGADIVKFATTALDITD--VARVFQI---TVHSQVPIIGLVMGE 203
+ + S + +A DI+K A + D R F+ H VP+I + MG+
Sbjct: 1181 LNWANGSWIQYYNKALQYGDIIKLVGVAETLKDNTALREFKDWAEQAHPDVPVIAINMGD 1240
Query: 204 RGLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
+G +SR+L GFLT +APGQ + ++ + P K F I GKP
Sbjct: 1241 KGQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRKGLSIMGEIP-AKKFAIFGKP 1295
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
V S+SP ++N F+ G V+ L D + S DF G S TIP K +
Sbjct: 1296 VSVSRSPAMHNTLFEQNGLPYVYTRLETDQAQDVKEFIRSPDFGGASATIPLKLDIIPLI 1355
Query: 323 DEVDTVAKSIGAVNCIIRRQ-SDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
DEV A+ IGAVN II + DG +L G NTD+ G + + + + + G SSAL
Sbjct: 1356 DEVLNEAEIIGAVNTIIPVEGKDGSTRLIGRNTDWSGIVRCLRE---AGAHSNEGESSAL 1412
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSL----AD 433
VIG GG +A Y G + V + R+ ++ + +A T G + + +D
Sbjct: 1413 ------VIGGGGTARAAIYALHNMGFSTVYVLGRSPEKIQNMASTFPTGFDIRVLENASD 1466
Query: 434 LENFN-------PEDGMILANTTSI--GMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
+EN P D I AN I + + K A A++ + Y P +T
Sbjct: 1467 IENIPRVAVGTIPGDRPIEANMREILCTIFERSGRAADGKSA----AVLLEMAYKPSVTP 1522
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L++ A +SG T + GLE +GQ Q+E +TG+
Sbjct: 1523 LMQLASDSGWTTIPGLEALVGQGVYQFEYWTGI 1555
>gi|374324961|ref|YP_005078090.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
gi|357203970|gb|AET61867.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
Length = 289
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 25/292 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTI 312
+ G++G P+ HSKSP+++ A K+ G G FV H+ D + + + F G + TI
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALKAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK +K DE+D A+ IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIV--NDNGRLKGYNTDGIGYVRSLKEE-------- 124
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSL 431
S L G V+GAGGA + + + + + V+I NRT D+A +LA A+ +
Sbjct: 125 --TSVKLKGTRIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAIPV 182
Query: 432 ADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
N E + +L NTTS+GM P DE P+ + +V D +Y P TR LR
Sbjct: 183 TGYSNDEAESVLASVDVLINTTSVGMSPLSDELPLETSLIPEGIIVSDLIYNPLETRFLR 242
Query: 488 EA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFN 538
E+ E+ G T+ GL MF+ Q +E F G+ AP + + +L S +
Sbjct: 243 ESREQRGCTVHGGLGMFVYQGAVAFEYFMGV-----APAVDEMRAAVLRSLS 289
>gi|258563398|ref|XP_002582444.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
gi|327507674|sp|C4JYG6.1|ARO1_UNCRE RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|237907951|gb|EEP82352.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
Length = 1580
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 229/523 (43%), Gaps = 81/523 (15%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQYDGD-E 97
G+D VE+R+D L + + E I L VP +FT R +GG++ D
Sbjct: 1067 GSDAVELRVDLLVDPSSSSEMPSVDYVAEQISILRSRVSVPLVFTIRTKSQGGRFPDDAH 1126
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
N +D+ RLA+ +G++++D+E+ ++ K K+I S H+ S + S
Sbjct: 1127 NAALDLYRLAIRMGSEFVDLEVTFPEYVLRAVTEMK-GVSKIIASHHDVANRLSWRNGSW 1185
Query: 158 LVARIQA-SGADIVKFATTALDITD--VARVFQITVHS--QVPIIGLVMGERGLISRILC 212
+A DI+K A + D R F+I +P+I + MGERG +SRIL
Sbjct: 1186 TQFYNKALQYGDIIKLVGIASQLDDNIALREFKIWAKKAHDIPVIAINMGERGRLSRIL- 1244
Query: 213 AKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + +APGQ + K++ + MG ++K F I+GKP+ S+SP
Sbjct: 1245 ---NGFMTPVSHPKLPFKAAPGQLSAKEIRE--GLSLMGEIESKKFAIVGKPISASRSPA 1299
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
L+N F VG V+ L DD+ + DF G S TIP K + DE+ AK
Sbjct: 1300 LHNALFADVGLPHVYGRLETDDVQNVKDLIHAPDFGGASITIPLKLDIMPLLDEIAPEAK 1359
Query: 331 SIGAVNCII---RRQSDGK----LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
IGAVN I+ R D K L GYNTD+ G + + G G VS + +
Sbjct: 1360 VIGAVNTIVPAPREPGDVKKGPRLIGYNTDWQGMVQCLRHG--------GAVSPSTSNDP 1411
Query: 384 F--VVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
+VIG GG +A + + G + + + R+ + ++ ALS N
Sbjct: 1412 APGLVIGGGGTARAAIHALHSMGYSPIYLVGRSESKLNDM-------ALSFPATYNLQ-- 1462
Query: 441 DGMILANTTSIGMQPKVDETPIPK--------------------------HALGHYALVF 474
IL + S+ + P V IP L ++
Sbjct: 1463 ---ILKDAESLEILPSVAIGTIPGDQPIDPSMREVLCRLFEMAARIDAELKELAPKRVLL 1519
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ Y P +T L + A + G + GLE +GQ Q++ +TG+
Sbjct: 1520 EMAYKPTVTPLSQLASDCGWATIPGLEALVGQGVYQFQLWTGI 1562
>gi|361131659|gb|EHL03311.1| putative Pentafunctional AROM polypeptide [Glarea lozoyensis 74030]
Length = 1393
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 234/509 (45%), Gaps = 58/509 (11%)
Query: 47 ASGADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQYDGD 96
A G+D +EIR+D LK+ I + L P+P +FT R + +GG++ D
Sbjct: 874 AVGSDAIEIRVDLLKDPKSTNGIPSIDFLSVQIAHLRSVVPLPLIFTVRTVSQGGKFPDD 933
Query: 97 -ENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED- 154
+ E + + + A+ +G +YID+E+ + E DS+ K K+I S H+ + S ++
Sbjct: 934 AQEEALKLYKAAVRMGLEYIDLEITLPDEVLDSVTSAK-GFSKIIASHHDPRGQLSWKNG 992
Query: 155 -LSNLVARIQASGADIVKFATTALDITD--VARVFQITV--HSQVPIIGLVMGERGLISR 209
R G DIVK +A + D F+ TV +P+I + MG +G +SR
Sbjct: 993 GWVQYYNRALQYG-DIVKLVGSAKCMEDNFALANFKATVAKSHNIPLIAINMGVQGKLSR 1051
Query: 210 ILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSK 267
+L GF+T +APGQ + ++ L ++ P K F + GKP+ S+
Sbjct: 1052 VL----NGFMTPVSHPALPFKAAPGQLSAAEIRQSLSLLGEIEP--KQFYLFGKPISESR 1105
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N F+ G + L D A + S DF G S TIP K + D V
Sbjct: 1106 SPALHNTLFQQTGLPHNYSRLETDVAADVKEIIRSPDFGGASVTIPLKLDIIPLLDGVSE 1165
Query: 328 VAKSIGAVNCI--IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK--L 383
AK IGAVN I I + +L G NTD++G ++ ++ S+ +G
Sbjct: 1166 AAKLIGAVNTIVPIPSKDSMRLIGENTDWLGMTHSL---------IAHNYSTVASGPPGS 1216
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+VIGAGG +A Y ++ G + + I +RT +A ++ T +L L+ + +
Sbjct: 1217 GLVIGAGGTSRAAVYALRSLGHSPIYIVSRTPSKAADMISTFPAD-FNLKALKQISDAEN 1275
Query: 443 MILANTTSIGMQPKVDETPI--------------PKHALGHYALVFDAVYTPKITRLLRE 488
+ +IG P + PI PK + + Y P IT L+R
Sbjct: 1276 LSEVPRVAIGTIPA--DKPIESNMREIIAAILRHPKADTARQRTLLEMAYKPTITPLVRM 1333
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A ++G + GLE+ Q + Q++ +TG+
Sbjct: 1334 ASDAGWISIPGLEVLSAQGWYQFQSWTGI 1362
>gi|325958381|ref|YP_004289847.1| shikimate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329813|gb|ADZ08875.1| Shikimate dehydrogenase [Methanobacterium sp. AL-21]
Length = 286
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 24/275 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T VFGIIG PV HS SP ++N AFK +G + ++V V + + S GF+
Sbjct: 6 TNVFGIIGDPVEHSLSPGMHNAAFKELGMDNIYVPFQVKAEHLEDAILGAQSLGVKGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK + D +D A IGAVN I ++ G+NTD +GA+ AIE+
Sbjct: 66 TIPHKTEVINYLDYLDIAAGLIGAVNTIEFGKNGA--VGHNTDGIGAVMAIEE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG---G 426
+ + K V++GAGGA +A+A+ G +VIANRT ++A EL +
Sbjct: 117 -----VTPVKNKKVVILGAGGASRAIAFQLLLSGVDNLVIANRTVEKAGELKTDLVEKLD 171
Query: 427 HALSLADL-ENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKI 482
H + ++ L EN E D IL NTT +GM P VDE P+ + H +V D VY P
Sbjct: 172 HEVRVSGLDENLTQELSDTAILINTTPVGMYPNVDEKPVVTAEMMHPDMVVNDIVYNPLK 231
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL EA+++GA +SG++M + Q E ++ +TG+
Sbjct: 232 TGLLNEADKAGAKSISGIKMLMYQGVEAFKIWTGI 266
>gi|311031592|ref|ZP_07709682.1| shikimate 5-dehydrogenase [Bacillus sp. m3-13]
Length = 278
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 20/268 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTI 312
++G+IG P+ HS SP+++N+AF G + + H+ D + GF+ TI
Sbjct: 4 LYGVIGSPIAHSMSPLIHNDAFLQNGMDAHYHAFHVEPDQLETAVAGMRVLGINGFNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKEA + D VD A IGAVN ++ R DG+L GYNTD G + A+++ ++
Sbjct: 64 PHKEAIIPLLDSVDDAALQIGAVNTVVNR--DGELIGYNTDGRGFVEALKEVVK------ 115
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSL 431
L K ++IGAGGA +A+ Y A KG ++ I NRT +A +L ++
Sbjct: 116 ------LKDKHVLIIGAGGAARAILYTLALEKGVQIDICNRTVSKAEDLIREFSLERITR 169
Query: 432 A---DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+ D + ++ TTS+GM PK+++ P+P ++ +A+ D +Y P T+LL+E
Sbjct: 170 SITVDQAAREIQRYDVVVQTTSVGMYPKINDIPLPLKSIKQHAVFTDIIYNPIETKLLQE 229
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+ GA +G+ MF QA +E +TG
Sbjct: 230 AKAIGAITQNGIHMFAYQAALAFEIWTG 257
>gi|402300002|ref|ZP_10819555.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
gi|401724793|gb|EJS98122.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
Length = 282
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 20/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
KV+G+ G PVGHS SPI++ AFK +G + V D I + + + G + T
Sbjct: 3 KVYGLFGYPVGHSMSPIMHEAAFKELGQKANYHAFNVKPDKIEEAVMAIRALELGGCNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK + DE+D A IGAVN I+ + GKL G+NTD G + ++ +
Sbjct: 63 IPHKVNVMNYLDEIDPEAAEIGAVNTIVNQ--GGKLKGFNTDGRGYLQSLLE-------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA-- 428
++ L GK +IGAGGA +A+ + +R+V+ANRT +A +L E A
Sbjct: 113 ---IAHTLEGKSVAIIGAGGAARAIVTVLVHESVSRLVVANRTKIKAEQLIERHKSKATE 169
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
L + D+ E I+ NTTS+GM P DE P+ + L +V D +Y P T+LL
Sbjct: 170 LGVMDMRELEYELASFDIIINTTSVGMSPNTDECPLSLNNLKKETIVSDLIYNPLKTKLL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
EAE GA +++G+ MF+ Q +E +TGL
Sbjct: 230 IEAESRGAKVLNGVGMFVNQGALSFEYWTGL 260
>gi|242774437|ref|XP_002478440.1| pentafunctional polypeptide (AroM), putative [Talaromyces stipitatus
ATCC 10500]
gi|327507673|sp|B8M0U4.1|ARO1_TALSN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|218722059|gb|EED21477.1| pentafunctional polypeptide (AroM), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1577
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 235/519 (45%), Gaps = 67/519 (12%)
Query: 41 DMGKANASGADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEG 90
D+ + ASG+D VE+R+D LK+ + E I + +P +FT R + +G
Sbjct: 1067 DLLRTVASGSDAVELRVDLLKDPSSDSAIPSAEYVAEQISFYRSKVALPIVFTVRTVSQG 1126
Query: 91 GQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT 149
G++ D ++ ++++ LA+ G ++ID+E+ E + K K+I S H+ Q
Sbjct: 1127 GKFPDDAHDAALELITLAIRSGCEFIDLEITFPEELLRKVTESKAH-AKIIASHHDPQGK 1185
Query: 150 PSVEDLSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGER 204
+ + S + +A DI+K A + D + + ++ VP+I + MG++
Sbjct: 1186 LNWANGSWIQYYNKALQYGDIIKLVGVAESLKDNTALKEFKDWAEQAHDVPVIAINMGDK 1245
Query: 205 GLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
G +SR+L GFLT +APGQ + ++ + P K F I GKP+
Sbjct: 1246 GQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRKGLSIMGEIP-AKKFAIFGKPI 1300
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S+SP ++N F+ G V+ L D + S DF G S TIP K + D
Sbjct: 1301 LASRSPAMHNTLFEQNGLPHVYTRLETDQTQDVKEFIRSPDFGGASVTIPLKLDIIPLID 1360
Query: 324 EVDTVAKSIGAVNCIIRRQ-SDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
EV A+ IGAVN II + DG +L G NTD+ G + + + + + G SSAL
Sbjct: 1361 EVLNEAEIIGAVNTIIPVEGKDGTTRLIGRNTDWSGIVRCLRE---AGAHSNEGKSSAL- 1416
Query: 381 GKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFN- 438
VIG GG +A Y G + V + R+ ++ + +A T + LEN +
Sbjct: 1417 -----VIGGGGTARAAIYALHHMGFSTVYVLGRSPEKIQNMASTF-PTGFDIRVLENADD 1470
Query: 439 ------------PEDGMILANTTSI--------GMQPKVDETPIPKHALGHYALVFDAVY 478
P D I N I G P D G +++ + Y
Sbjct: 1471 IETIPRVAVGTVPGDQPIEPNMREILCTIFKRSGQDPSAD---------GASSVLLEMAY 1521
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P +T L+R A ++G + GLE +GQ Q+E +TG+
Sbjct: 1522 KPSVTPLMRLASDAGWKTIPGLEALVGQGVYQFEYWTGI 1560
>gi|315645929|ref|ZP_07899050.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
gi|315278690|gb|EFU42004.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
Length = 286
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 26/282 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
D + G++G P+GHSKSP ++N A ++G +G +V H+ + + + Q + F G +
Sbjct: 10 DYLLLGVMGDPIGHSKSPAMHNAAITALGLSGAYVPLHVRPEGLGEAIQAVKALGFRGVN 69
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK +K D VD A+ IGAVN I+ +G L GYNTD +G + +++D
Sbjct: 70 VTIPHKVEVMKYLDVVDEGARQIGAVNTIV--NDNGTLKGYNTDGIGYVRSLKDE----- 122
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHA 428
L GK VV+GAGGA + + Y K + I NRT +A LAE
Sbjct: 123 -----ACPDLKGKRIVVLGAGGAARGIIYALIGEKPETISIVNRTAAKALALAEEWS--- 174
Query: 429 LSLADLENFN---PEDGMILA----NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
SLADL + E+ ++ A NTTS+GM P++ E PIP+ + +V D +Y P
Sbjct: 175 -SLADLRGYGEDYAEEALLTADVIINTTSVGMFPRISEIPIPQGHIPEGIVVSDLIYNPL 233
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T LLR+ E T+ GL MFI Q E +TGL + A
Sbjct: 234 KTELLRQGELRQCTVHGGLGMFINQGAYALEYWTGLTAPVQA 275
>gi|389742773|gb|EIM83959.1| Pentafunctional AroM protein [Stereum hirsutum FP-91666 SS1]
Length = 1619
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 243/510 (47%), Gaps = 63/510 (12%)
Query: 48 SGADLVEIRLDGL---KNFNP-----------RENIKTLIKESPVPTLFTYRPIWEGGQY 93
+GAD +E+R+D L K+F+ + I L +++ +P +FT R + +GG +
Sbjct: 1113 AGADAIELRVDLLRSPKDFDHVGAYVPPAAYVTDQISALRQKTSLPIVFTARTVSQGGLF 1172
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVA-REFNDSIRGKKPEKCKVIVSSHNYQ---- 147
D E ++ LA+ LG +YIDVE+ ++ D + K ++I S H++
Sbjct: 1173 PDSSVKEAFELFDLALRLGVEYIDVEISWPEKKIRDLVSRKG--HSQIIASWHDWSGRMK 1230
Query: 148 -YTPSVEDLSNLVARIQASGADIVKFATTALDITDV----ARVFQITVH-SQVPIIGLVM 201
T V+D +L DIVK A + D A V ++T P++ + M
Sbjct: 1231 WNTQEVKDKYDLANTF----GDIVKIVGKANSLQDNLDLHAFVSKVTAALDSKPVLAINM 1286
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIG 260
G G +SRIL F +T L + +APGQ + ++ LY Q+ +K F I G
Sbjct: 1287 GVEGQLSRILNTTFSP-ITHPLLPSK--AAPGQLSFAEIQSALYLMGQL--PSKKFYIFG 1341
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDI-AKFFQTYSSNDFAGFSCTIPHKEAAV 319
P+ HS SP L+N FK +GF + L ++ ++ T +S DF G S TIP K +
Sbjct: 1342 TPIAHSPSPTLHNTGFKLLGFPHNYEILETTEVDSQVLVTITSPDFGGASVTIPFKRDIM 1401
Query: 320 KCCDEVDTVAKSIGAVNCIIR-RQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
D++ A++IGAVN II +S+G L+G NTD+ G I +R RL
Sbjct: 1402 AHLDQLSPEAEAIGAVNTIIPVYKSNGSHILYGDNTDWKG----ISASIRSRL------- 1450
Query: 377 SALAGKLFV--VIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD 433
A+ K+ V VIGAGG +A Y A GA ++ I NRT A L + G + + D
Sbjct: 1451 PAIVHKVEVGLVIGAGGTSRAAIYALHALGAKKIYIFNRTRSSAEVLLHAIPGANVEVID 1510
Query: 434 -LENF-NPEDGMIL----ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L ++ P +I+ A+ T+I P +V D Y P T LL
Sbjct: 1511 SLGSWPGPAPSVIVSTVPASATTIESAATNALVLSPSLFRPEGGVVVDMAYKPAETPLLA 1570
Query: 488 EA-EESGATIVSGLEMFIGQAYEQYERFTG 516
A +E V G+E+ + Q YEQ++ +TG
Sbjct: 1571 LAKKEQAWKAVMGVEVLLEQGYEQFQAWTG 1600
>gi|317128280|ref|YP_004094562.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315473228|gb|ADU29831.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
Length = 281
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 24/278 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
++ G+IG P+GHS SP ++N A++ +G N + H+ + + + G + T
Sbjct: 3 QIIGVIGDPIGHSLSPHMHNAAYRELGINMEYHAFHVKREQLENALKGVRGLGIKGLNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK + DEVD +A+ +GAVN I+ DGKL G+NTD G + ++ + ++G L
Sbjct: 63 IPHKVNVLPYLDEVDELARHLGAVNTIV--NEDGKLIGFNTDGEGYLQSLYEFIQGDLQT 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHA-- 428
K ++IGAGGA +A+ G + +++ NRT ++ EL +
Sbjct: 121 ----------KRVLMIGAGGASRAVTLTIANSGVKEIIVTNRTAEKGEELVKDCKKFCPS 170
Query: 429 --LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+SL ++E N E ++ NTTSIGM P +++ PI + +V D +YTP T+ L
Sbjct: 171 SFMSLEEVEK-NLERFDVVINTTSIGMAPHLNKLPISLDKVKSDTIVSDLIYTPFKTKFL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP 524
EAE+ G +++GL+MF+ Q ++R+TG+ NAP
Sbjct: 230 IEAEKKGCRVLNGLDMFVYQGALAFKRWTGI----NAP 263
>gi|167037479|ref|YP_001665057.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115893|ref|YP_004186052.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856313|gb|ABY94721.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928984|gb|ADV79669.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 284
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 20/276 (7%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AFKS+ N V+ +L + + S
Sbjct: 2 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKSLGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D V A IGAVN ++ + G L GYNTD G I ++ +
Sbjct: 62 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNEE--GILKGYNTDVYGFIDSLTE-- 117
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 118 ---------VGKKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 168
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
D + N + IL NTTS+GM P +++P + + V+D +Y P
Sbjct: 169 KKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNP 228
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL+ A+++G +GL M + QA ++ +TG
Sbjct: 229 FETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|410076270|ref|XP_003955717.1| hypothetical protein KAFR_0B02850 [Kazachstania africana CBS 2517]
gi|372462300|emb|CCF56582.1| hypothetical protein KAFR_0B02850 [Kazachstania africana CBS 2517]
Length = 1580
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 224/492 (45%), Gaps = 42/492 (8%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTL----IKESPVPTLFTYRPIWEGGQYDGDENERVDVL 104
G D VE+R+D L P I+ L + +P +FT R +GGQ+ D +E + L
Sbjct: 1090 GCDAVEVRVDHLAKLEPDYVIRQLSTLRLATDGLPIIFTLRTRKQGGQFADDSHELLLDL 1149
Query: 105 RLAM-ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED--LSNLVAR 161
G +++D+EL + + I K K+I S H++ +D N +
Sbjct: 1150 FKLALRAGVEFVDLELSLPTDIQYKILNSK-GNTKIIGSHHDFDGVHPWDDSEWENRYNQ 1208
Query: 162 IQASGADIVKFATTALDITDVARVFQIT-VHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+ D++KF TA D + + H P+I + MGE G +SR+L +T
Sbjct: 1209 ALSLDVDVIKFVGTAKSFEDNLTLERFRHSHKAKPMIAINMGELGKVSRVLNTILTP-IT 1267
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAFKSV 279
L N +APGQ TI + +Y MG T K F ++GKPVGHS+SPIL+N +K +
Sbjct: 1268 SDLLPN--TAAPGQLTIAQINQVY--ASMGGITAKNFYVVGKPVGHSRSPILHNTGYKVL 1323
Query: 280 GFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
G F D ++ + G + TIP K +K DE+ AK IGAVN
Sbjct: 1324 GLPHKFDKYETDSAEEVKEKIIDAQRGKLGGLAVTIPLKLDIMKYLDEISAPAKVIGAVN 1383
Query: 337 CIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKAL 396
+ + +G L G NTD++G +A+ +S GV ++G +V+GAGG +A
Sbjct: 1384 TVTPLE-NGTLKGDNTDWLGITNAL---------LSNGVPDHVSGHAGLVVGAGGTSRAA 1433
Query: 397 AYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP 455
Y G ++ + NRT + EL + + ++ + +I ++ P
Sbjct: 1434 VYALHRLGCEKIYMINRTTAKLHELKNSFPAE-YKIVVIDTVEQAEQVIENVGIAVSCVP 1492
Query: 456 -----------KVDETPIPKHALGHYALVFDAVYTPKITRLLREA-EESGATIVSGLEMF 503
K++ I A + +A Y P +T +++ A ++ +V G+EM
Sbjct: 1493 GDKHLDDVLLGKLERLLIKGSGSSFPATLLEAAYKPAVTPIMKLAFDKYNWNVVPGVEML 1552
Query: 504 IGQAYEQYERFT 515
+ Q Q++++T
Sbjct: 1553 VHQGVAQFQQWT 1564
>gi|366999921|ref|XP_003684696.1| hypothetical protein TPHA_0C01060 [Tetrapisispora phaffii CBS 4417]
gi|357522993|emb|CCE62262.1| hypothetical protein TPHA_0C01060 [Tetrapisispora phaffii CBS 4417]
Length = 1578
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 248/542 (45%), Gaps = 72/542 (13%)
Query: 14 LVSGGMRKNPTLICVPI--MGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKT 71
+V G ++ + +C+ + E VD + + +G D VE+R+D L N+ P K
Sbjct: 1057 VVLGIPKQRSSFVCLTFEDLFEEVDNLALI-----TAGCDAVEVRIDHLANYEPAFISKQ 1111
Query: 72 L----IKESPVPTLFTYRPIWEGGQYDGDENERV-DVLRLAMELGADYIDVELQVAREFN 126
L I +P +FT R +GG++ + E + + LA++ G D+ID+EL + +
Sbjct: 1112 LSILRIATDGLPIIFTIRTKKQGGKFPDEVYESMRHLFTLALKSGIDFIDMELTLPTDVQ 1171
Query: 127 DSIRGKKPEKCKVIVSSHNY--QYTPSVEDLSNLVARIQASGADIVKFATTALDITD--V 182
I +K K+I S H++ +Y+ + + + DI+KF +AL D +
Sbjct: 1172 YHILNRKGH-TKIIGSHHDFSGEYSWDDSEWETRYNQALSLDVDIIKFVGSALKFEDNLL 1230
Query: 183 ARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLD 242
F+ H P+I + M E G ISR+L +T L N +APGQ T++++
Sbjct: 1231 LETFR-NNHKAKPLIAINMRELGKISRVLNPILTP-ITSELLPNA--AAPGQLTLREINK 1286
Query: 243 LYNFRQMGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY- 300
+Y+ +G + + F ++G P+GHS+SPIL+N ++ +G F D I K
Sbjct: 1287 IYS--TLGGFSPLNFYVVGSPIGHSRSPILHNTGYEILGLPHKFDKFETDSIEKVKSELL 1344
Query: 301 -SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS 359
++ G + TIP K +K +++ A +IGA+N II +GK G NTD++G +
Sbjct: 1345 DGESNLGGLAVTIPLKLEIMKYLNDLTPAASTIGAINTIIPL-GNGKFLGDNTDWLGIKN 1403
Query: 360 AIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRAR 418
A S GV + G +VIGAGG +A Y G +++ + NRT +
Sbjct: 1404 AF---------ASNGVPENVNGAAGLVIGAGGTSRAAIYALHIMGCSKIYLLNRTATKLP 1454
Query: 419 ELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK---------VDETPIPKHALGH 469
L + ENFN +IL + + I + K + PI LG
Sbjct: 1455 SLKASFP---------ENFNI---IILNSVSDIEKEAKNIGVAVSCIPADKPIDIDLLGR 1502
Query: 470 Y-------------ALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIGQAYEQYERFT 515
+ +A Y P IT ++R +++ + G + + Q Q+ER+T
Sbjct: 1503 LERFLSNGIHASFKPTLLEAAYKPAITPIMRLSKDKYKWETIPGSHLLVHQGVAQFERWT 1562
Query: 516 GL 517
G
Sbjct: 1563 GF 1564
>gi|367055142|ref|XP_003657949.1| hypothetical protein THITE_2124223 [Thielavia terrestris NRRL 8126]
gi|347005215|gb|AEO71613.1| hypothetical protein THITE_2124223 [Thielavia terrestris NRRL 8126]
Length = 1587
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 237/518 (45%), Gaps = 70/518 (13%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L+N++P + L + VP ++T R + +GG++ D D ++
Sbjct: 1074 GSDAVELRVDLLQNYDPDFVARQVALLRSAAKVPIVYTVRTVSQGGKFPDDDYKLARELY 1133
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
++ + G +Y+D+E+ + E +++ K ++I S H+ QY S ++ S + +A
Sbjct: 1134 QVGLRTGVEYLDLEMTMPAEILEAVTEAK-GFTRIIASHHDPQYRLSWKNGSWIPFYNKA 1192
Query: 165 -SGADIVKFATTALDITDVA-----RVFQITVHSQVPIIGLVMGERGLISRILCAKFGGF 218
D++K A +I D + + H++ P+I L MG G +SR+L GF
Sbjct: 1193 LQYGDVIKLVGVAREIGDNFALTNFKTRMLAAHNK-PVIALNMGPAGKLSRVL----NGF 1247
Query: 219 LT---FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
+T L + +APGQ + ++ L ++ P K F + GKP+G S+SP L+N
Sbjct: 1248 MTPVSHPALPSK--AAPGQLSAAEIRQALALIGELEP--KSFYLFGKPIGSSRSPALHNT 1303
Query: 275 AFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
F + G + D + S DF G S TIP K + D + A++IGA
Sbjct: 1304 LFGATGLPHQYSRFETDRASDVQDLLRSPDFGGASVTIPLKLDIMPLLDRISDAARAIGA 1363
Query: 335 VNCII--RRQSDG---KLFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKLFVVIG 388
VN II +DG L G NTD++G + A+ GL R G + +V+G
Sbjct: 1364 VNTIIPVAPSADGAKPALLGDNTDWMGMVFALRSAGLVQRSAARPGAA--------MVVG 1415
Query: 389 AGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPED------ 441
+GG +A Y + G A + + RT DR RELA G A PED
Sbjct: 1416 SGGTTRAAIYALHSLGYAPIYVVARTPDRVRELA---AGFPPDYAVRHLATPEDVAALAP 1472
Query: 442 -GMILANTTSIGMQPKVD---------------------ETPIPKHALGHYALVFDAVYT 479
+ ++I +D + P A ++ + Y
Sbjct: 1473 DALPAVAVSTIPADKPIDPGMREVLVRALHAGNGGGGETDGATPTAAARPPRVLLEMAYM 1532
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P+ T L++ AE++G + GLE+ Q + Q++ +TG+
Sbjct: 1533 PRHTPLMQLAEDAGWKTIPGLEVLAAQGWYQFQLWTGI 1570
>gi|326471134|gb|EGD95143.1| hypothetical protein TESG_02636 [Trichophyton tonsurans CBS 112818]
Length = 1570
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 235/514 (45%), Gaps = 76/514 (14%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+ VE+R+D LK+ + E I L + +P +FT R +GG + D
Sbjct: 1074 GSHAVELRVDLLKDPSSNSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQGGLFPDNAV 1133
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYTPSVED 154
+E + + +LA+ +G++++D+E+ F D++ E K+I S H+ S +
Sbjct: 1134 DEALGLYKLAIRMGSEFVDLEIS----FPDNLLHAVTEIKGFSKIIASHHDVNGQLSWAN 1189
Query: 155 LSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISR 209
S + +A D++KF A + D + Q ++ +PI+ + MG +G +SR
Sbjct: 1190 GSWIQYYNKALQYGDVIKFIGVAKSLGDNMALQQFKAWAEKSYPIPIVAINMGNKGCLSR 1249
Query: 210 ILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSK 267
IL GF+T +APGQ + K++ +G D K F + GKP+ S+
Sbjct: 1250 IL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTL--IGELDAKEFALFGKPISASR 1303
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N F GF + L D++ + S +F G S TIP KE ++ DE+
Sbjct: 1304 SPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELLDEISP 1363
Query: 328 VAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
AK IGAVN I+ +G KL GYNTD+ G ++D G + + G S+
Sbjct: 1364 EAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--GAIYLKKGESA------ 1415
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+ IG+GG +A Y + G + + + RT +LA + +N +
Sbjct: 1416 -LTIGSGGTARAAIYSLHSMGYSPIYLVGRTPANLTKLASSFPAE---------YNVQ-- 1463
Query: 443 MILANTTSIGMQPKVDETPIP-----------------KHALG--HYALVFDAVYTPKIT 483
++ + S+ PKV + IP K + G ++ D Y P +T
Sbjct: 1464 -VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELIALIMKRSQGGSDECIILDMAYKPDVT 1522
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ + A +G IV GLE+ + Q Q+E +TGL
Sbjct: 1523 AIAQLASPAGWKIVKGLEVLVAQGVYQFEHWTGL 1556
>gi|327302676|ref|XP_003236030.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
gi|326461372|gb|EGD86825.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
Length = 1570
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 231/513 (45%), Gaps = 74/513 (14%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+ VE+R+D LK+ E I L + +P +FT R +GG + D
Sbjct: 1074 GSHAVELRVDLLKDPTSTSAIPSINYVAEQISFLRSQVSLPLIFTIRTKAQGGLFPDNAV 1133
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE---KCKVIVSSHNYQYTPSVED 154
+E + + +LA+ +G+D+ID+E+ F D++ E K+I S H+ S +
Sbjct: 1134 DEALGLYKLAIRMGSDFIDLEIS----FPDNLLHAVTEIKGYSKIIASHHDVNGQLSWSN 1189
Query: 155 LSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISR 209
S + +A D++K A + D + Q ++ +P+I + MG +G +SR
Sbjct: 1190 GSWIQYYNKALQYGDVIKLIGVAESLDDNLALQQFKAWAERSYPIPMIAINMGNKGRLSR 1249
Query: 210 ILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKS 268
IL +F ++ L +APGQ + K++ MG D K F + GKP+ S+S
Sbjct: 1250 IL-NRFMTPVSHPALP--FKAAPGQLSAKEIRQALTL--MGELDAKEFALFGKPISASRS 1304
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
P L+N F GF + L D++ ++ S +F G S TIP KE ++ DE+
Sbjct: 1305 PALHNTLFAEAGFPHEYGRLETDNVEDVKESIYSEEFGGASVTIPLKERIMELLDEISPE 1364
Query: 329 AKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
AK IGAVN I+ +G KL GYNTD+ G ++D G + + G S+
Sbjct: 1365 AKIIGAVNTIVPIVEEGKATRKLVGYNTDWQGMARCLKDA--GAIYLKKGESA------- 1415
Query: 385 VVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
+ IG+GG +A Y + G + + + RT +LA + +N +
Sbjct: 1416 LTIGSGGTARAAIYSLHSMGYSPIYLVGRTPANLTKLASSFPAE---------YNVQ--- 1463
Query: 444 ILANTTSIGMQPKVDETPIP-------------------KHALGHYALVFDAVYTPKITR 484
++ + SI PKV + IP ++ D Y P +T
Sbjct: 1464 VVEDIKSIQTFPKVAISTIPGDQEISEPLQELIALIMKDGQESSEKCIILDMAYKPDVTA 1523
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ + +G IV GLE+ + Q Q+E +TGL
Sbjct: 1524 IAQLVSPAGWKIVKGLEVLVAQGVYQFEHWTGL 1556
>gi|392941090|ref|ZP_10306734.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
gi|392292840|gb|EIW01284.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
Length = 292
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AF S+ N V+ +L + + + +
Sbjct: 10 KINANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTAFDVLPEKLEDAVKGAKALGI 69
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GF+ T+PHKE +K D V A IGAVN ++ G L GYNTD G I ++ +
Sbjct: 70 KGFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDVYGFIDSLTE-- 125
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 126 ---------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 176
Query: 425 GGHALSLADLENFN-----PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
D + N PE M L NTTS+GM P V+++P+ + + V+D +Y
Sbjct: 177 KREFKIQCDYCSINEVEEIPEIDM-LVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIYN 235
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLY 527
P T L+ A+++G +GL M + QA ++ +TG N ++Y
Sbjct: 236 PFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGEFFDKNLVYMY 283
>gi|329943069|ref|ZP_08291843.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|332287652|ref|YP_004422553.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|384450809|ref|YP_005663409.1| 3-dehydroquinate dehydratase [Chlamydophila psittaci 6BC]
gi|384451804|ref|YP_005664402.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|384453757|ref|YP_005666353.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|384454736|ref|YP_005667331.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|392376882|ref|YP_004064660.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|407454281|ref|YP_006733389.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|407456971|ref|YP_006735544.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
gi|313848225|emb|CBY17226.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|325506567|gb|ADZ18205.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|328814616|gb|EGF84606.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|328914903|gb|AEB55736.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila psittaci 6BC]
gi|334692538|gb|AEG85757.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|334693514|gb|AEG86732.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|334694493|gb|AEG87710.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|405781040|gb|AFS19790.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|405784232|gb|AFS22979.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
Length = 477
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 226/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEIAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-NIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
A GQ +I+DLL YN+ + +++++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAQGQLSIEDLLA-YNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L K ++G+GGA KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------LLQNKHVGIVGSGGAAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|347753134|ref|YP_004860699.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
gi|347585652|gb|AEP01919.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
Length = 280
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 153/270 (56%), Gaps = 20/270 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTI 312
++G+IG P+ HS SP ++NEAF+++G + + H+ +++ + AGF+ TI
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGIDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK+A + DE+D +A++IGAVN ++R + GYNTD G + A+++ GR+
Sbjct: 64 PHKQAIMPYLDEIDLLAETIGAVNTVVR--TPHGWAGYNTDGPGFMQALKEE-SGRV--- 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGH 427
++G+ +VIGAGGA +A+ Y +GA V + NRT +A E+ +
Sbjct: 118 ------ISGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCPSK 171
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L+L + E E +I+ TTSIGM P D P+ L A V D +Y P T+ L+
Sbjct: 172 VLTLKEAEEQLGEYTLIV-QTTSIGMHPNTDAQPLSVRNLNPDAFVSDIIYNPFETKFLK 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
EA++ GA + +GL MFI Q +E++TG+
Sbjct: 231 EAKKRGARVQNGLGMFIYQGAIAFEKWTGV 260
>gi|288555655|ref|YP_003427590.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
gi|288546815|gb|ADC50698.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
Length = 278
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 150/276 (54%), Gaps = 29/276 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K FG+IG PV HS SP ++N+AF++ + + + V+ D+ + + G + T
Sbjct: 3 KRFGLIGHPVAHSMSPQMHNDAFRACEIDADYEAIDVEAGDLEEVMEKIRIGVLDGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DE+D A+ IGAVN I+R ++GKL GYNTD G + +IE L
Sbjct: 63 IPHKVAIMSFIDEIDREAERIGAVNTIVR--NNGKLVGYNTDGAGYMQSIEPYL------ 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---- 426
S L +VIGAGGA +A+ G + +V+ANRT ++A L +
Sbjct: 115 ----PSNLHDINVLVIGAGGAARAVCASFLGAGVSSLVVANRTKEKADTLLNLISTKQDQ 170
Query: 427 -HALSLAD----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
+A++L++ LE F+ I+ NTTS+GM P ++ PI L A+V D +Y P
Sbjct: 171 TNAMTLSEAEKGLERFD-----IIVNTTSVGMSPYTEQKPISLTKLKDKAIVSDLIYNPL 225
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T L+EA E GA V+G+ MF+ Q +E +TG+
Sbjct: 226 ETAFLKEAAERGAITVNGVGMFVNQGALSFEYWTGI 261
>gi|354594119|ref|ZP_09012162.1| shikimate dehydrogenase [Commensalibacter intestini A911]
gi|353673230|gb|EHD14926.1| shikimate dehydrogenase [Commensalibacter intestini A911]
Length = 279
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+ ++G P+ HS+SP+L+N + +G ++ L V +D Q + F G + T
Sbjct: 9 KIAAVLGWPIEHSRSPLLHNFWLQRHQIDGAYIPLAVKAEDFKNVIQGMKAAGFKGCNVT 68
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKEAA +CCD VD AK +G+VN + + DGK+ G +TD G ++ ++D
Sbjct: 69 IPHKEAAYQCCDIVDETAKKMGSVNTLWFTE-DGKIHGTSTDGDGFVANLKDA------- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
L K +++GAGGA +++AY GA++ I NRT RA +L +G A +
Sbjct: 121 ----DVTLTDKKVLILGAGGAARSVAYSLIQDGAQITITNRTLQRAEQLVRDLG--AGQI 174
Query: 432 ADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
+ +++ E G +L NTTS+GM+ K D +HA +V D VY P+IT LL A
Sbjct: 175 IEWQSWIKELGQFDVLVNTTSLGMEGKDDYLFDLQHA-SKDLVVTDIVYVPRITPLLEAA 233
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
E G V GL M + QA + ++ G+
Sbjct: 234 ELKGLKTVEGLGMLLHQARLGFSKWFGV 261
>gi|212638656|ref|YP_002315176.1| shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560136|gb|ACJ33191.1| Shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 299
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 149/268 (55%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K+F +IG PV HS SP+++N+AF+S+ + + H+ + + + + AGF+ T
Sbjct: 26 KLFALIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVEGLKALQCAGFNVT 85
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A ++ DE+D AK +GAVN ++ +GK GYNTD G + A+ + ++N+
Sbjct: 86 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCE----QMNI 139
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALS 430
L+G ++IGAGGA + + + K + A + + NRT ++A + S
Sbjct: 140 E------LSGARILIIGAGGAARGIYFTLLKHEAATIDVCNRTPEKAETFIQKERSAVYS 193
Query: 431 LADLEN-FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
L E D I+ NTTS+GM P VD PI L +V D +Y P +T+ L+EA
Sbjct: 194 LEQAEERLGAYD--IIINTTSVGMYPHVDTMPISLQTLKSGTIVSDIIYNPLMTKFLQEA 251
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
+E GA + +G+ MF+ Q +E++TG+
Sbjct: 252 KEKGARVQNGVGMFVYQGALAFEKWTGI 279
>gi|308271588|emb|CBX28196.1| hypothetical protein N47_G35200 [uncultured Desulfobacterium sp.]
Length = 289
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 152/284 (53%), Gaps = 23/284 (8%)
Query: 243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS 302
+ +G +TK+ +IG P+ HS SP ++N + ++ + V+V V+DI +
Sbjct: 1 MRKLTSIGTNTKLCAVIGNPISHSLSPAIHNAGYDALDLDFVYVSFRVEDIKNALAGMRA 60
Query: 303 -NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI 361
+F G S TIPHK A + DE+ + ++IG++N +I + GKL G TD GA+ AI
Sbjct: 61 LENFRGMSVTIPHKIAIIDLVDEISDLDRNIGSINTVINEK--GKLIGLGTDGPGALKAI 118
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY--GAKAKGARVVIANRTYDRARE 419
D GV+ L G+ ++IG+GGA +A+A+ A ++ + + +
Sbjct: 119 RDA---------GVN--LEGQKVLMIGSGGAARAIAFTLAQNAGLEKLTLLDIDAAMMNK 167
Query: 420 LAETV--GGHALSLADLE-----NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL 472
LA + G A+ +D+ + N + ++ + T +GM PK D + +P +
Sbjct: 168 LASDLKAGTKAIIESDMLTDTSLSANMKQADLVIHCTPVGMHPKEDASLVPPQLFKPGQV 227
Query: 473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+FD VYTP T+LL+EA+ G +SG+EMFI QA Q+ERFTG
Sbjct: 228 IFDVVYTPLKTKLLKEAQMHGLKTISGVEMFINQAVLQFERFTG 271
>gi|345562790|gb|EGX45803.1| hypothetical protein AOL_s00117g8 [Arthrobotrys oligospora ATCC
24927]
Length = 1582
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 238/512 (46%), Gaps = 68/512 (13%)
Query: 49 GADLVEIRLDGL-----KNFNP-----RENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G D VE+R+D L KN P E + L ++ +P +FT R + +GG+Y
Sbjct: 1075 GCDAVELRVDLLLDPSQKNGIPSLKYLNEQVAYLRSKTKLPLIFTIRTVSQGGRYPDSAI 1134
Query: 99 ERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
E + L + A+++G +Y+D+E+ + I K ++I S H+ + S D S
Sbjct: 1135 EEAEKLYVEALKMGFEYLDLEMTWPEDLLQRITSAK-GFTQIIASHHDTKQVHSWADGSW 1193
Query: 158 L-VARIQASGADIVKFATTALDITD---VARVFQITVHSQ-VPIIGLVMGERGLISRILC 212
+ V + DIVK A + D + + + V +Q V +I + M +G +SR+L
Sbjct: 1194 IPVFNKAVAHGDIVKLVGIARSLADNYSLEKFREWAVSTQKVKLIAINMTSKGQLSRVL- 1252
Query: 213 AKFGGFLT-FGTLENGIVSAPGQPTIKDL-LDLYNFRQMGPDTKVFGIIGKPVGHSKSPI 270
GFLT +APGQ +I ++ L ++ P K F + GKPV HS+SP
Sbjct: 1253 ---NGFLTPVSHPALPFKAAPGQLSITEINRALTLLGEITP--KQFYLFGKPVSHSRSPA 1307
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAK-FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
L+N F G + LL DIA+ ++DF G S TIP K + DE+ A
Sbjct: 1308 LHNSLFGRFGLPHNY-DLLETDIAEDTLGKIRADDFGGASVTIPLKLSYFDYLDEISDEA 1366
Query: 330 KSIGAVNCI--IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
++IGAVN I I +GK L G NTD++G A+E SGG +++ G +
Sbjct: 1367 RAIGAVNTIYPIGLADNGKKILRGDNTDWLGIKMALE---------SGGFANS--GGPGL 1415
Query: 386 VIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
VIGAGG +A Y A K + + I NRT + +R++A + G + +E
Sbjct: 1416 VIGAGGTSRAAVYALASLKISPIYIINRTAENSRQMAASFPGDQYDIQVIETVEEA---- 1471
Query: 445 LANTTSIGMQPKVDETPIPKH-----------ALG---------HYALVFDAVYTPKITR 484
A+ SI + V P + LG ++ + Y P+ T
Sbjct: 1472 -ASKISIPLVAAVSTVPADREIDVKLKGILTAVLGIGSTGNGDSERPVLVEMAYKPQHTD 1530
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+++ AE G V GLE GQ EQ++RFTG
Sbjct: 1531 MMKLAEGLGWKTVPGLEALTGQGIEQFKRFTG 1562
>gi|323334224|gb|EGA75607.1| Aro1p [Saccharomyces cerevisiae AWRI796]
Length = 1588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 240/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|29840484|ref|NP_829590.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila caviae GPIC]
gi|29834833|gb|AAP05468.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila caviae GPIC]
Length = 477
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 219/465 (47%), Gaps = 44/465 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLI--KESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + + +K L+ + P+ TL + + E ER + LA
Sbjct: 26 DSIELRIDCLLSLS-SDQLKHLVCLAKKPILTLRRHASLSEIAWV-----ERT--MELA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
+L DY+D++ +E IR + P K+I+S H+ Q + V L N + + QA
Sbjct: 77 KLQPDYLDIDKDFPKEALRKIRNQYPN-IKIILSYHS-QTSEHVPTLYNEMLKQQAHH-- 132
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R+ QI H L MG G+ SRIL + + + +
Sbjct: 133 -YKIAITSTKSVDALRLIQIKKHLPENTTVLCMGNEGIASRILSPLMKNAINYASGIHAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
APGQ +I+DLL YN+ + + +++G+IG P+ S S + +N+ F + ++ +
Sbjct: 192 KVAPGQLSIEDLLA-YNYANLSSEARIYGLIGNPIDRSISHLSHNKLFSELHMKTSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ D+ +FF F G S T+P K + D D K + N ++ ++ K
Sbjct: 251 LLSSADLKEFFSLTRDLPFGGLSVTMPFKTDVLDYIDVFDPSVKHCQSCNTLVFNKN--K 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ G+NTD +G ++ L R N+ V + G ++G+GGA KA+A GA
Sbjct: 309 ITGHNTDGLGLLN-----LLKRKNI--AVHNTHVG----IVGSGGAAKAIATTFAYSGAC 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT + ++LAE G+A L+ L + D +IL + K+ E P
Sbjct: 358 ISIFNRTEENGKKLAELCNGNAFPLSSLSEKHAIDILILCLPPHV----KIPEIFPP--- 410
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
+V D PK + R+A+ G ++ G EMF QA Q+
Sbjct: 411 -----VVIDINTLPKESPYTRKAKAQGCHVLYGYEMFAEQALLQF 450
>gi|6320332|ref|NP_010412.1| pentafunctional protein ARO1p [Saccharomyces cerevisiae S288c]
gi|114166|sp|P08566.1|ARO1_YEAST RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|3381|emb|CAA29458.1| unnamed protein product [Saccharomyces cerevisiae]
gi|665659|emb|CAA88208.1| Aro1p [Saccharomyces cerevisiae]
gi|285811149|tpg|DAA11973.1| TPA: pentafunctional protein ARO1p [Saccharomyces cerevisiae S288c]
Length = 1588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 240/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKRG-NTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|328857285|gb|EGG06402.1| hypothetical protein MELLADRAFT_74837 [Melampsora larici-populina
98AG31]
Length = 1581
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 224/496 (45%), Gaps = 50/496 (10%)
Query: 48 SGADLVEIRLDGLKNFNP-------------RENIKTLIKESPVPTLFTYRPIWEGGQY- 93
+G D VE+R+D L + R + L + + +P +FT R +GG++
Sbjct: 1091 TGCDAVELRVDLLSSAGKTPQASTVPSLHFIRRQVAALRRLTTLPIIFTVRTDGQGGKFP 1150
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSV 152
G E E ++L L + G +Y+DVEL + E + KK +I S H++ S
Sbjct: 1151 GQGSEKEYFELLELGLRTGCEYVDVELGHSPELIRQLGAKKGHSL-LIGSYHDFAGKLSW 1209
Query: 153 EDLSNLVARIQA--SGADIVKFATTALDITDVARVFQI-TVHSQV---PIIGLVMGERGL 206
+ ++ QA ADIVK T A + D + HS P+I + MG G
Sbjct: 1210 NS-KEMESKYQAIRKYADIVKLVTVAKSMDDNLALLNFRATHSSTSFPPLITINMGLEGQ 1268
Query: 207 ISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHS 266
+SRIL LT L +APGQ T + + P ++ F + G P+GHS
Sbjct: 1269 MSRILSPVLSP-LTHELLPE--PAAPGQLTYNQIQQALDLLGQHP-SRQFWLFGNPIGHS 1324
Query: 267 KSPILYNEAFKSVGFNG-VFVHLLVDDIAK--FFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
+SP+++N +F+++ V+ + D + K + DF G S TIP K + D
Sbjct: 1325 RSPLMHNTSFEALSLRSHVYSPMETDTLDKESVKAVLRAPDFGGASVTIPLKLEVLSLMD 1384
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ A+ +GAVN IIRR KL G NTD+ + I L V ++AL
Sbjct: 1385 ELTDEAREVGAVNTIIRRGD--KLIGDNTDWYAIATLIRRSLPADPTVR---ATAL---- 1435
Query: 384 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
V+GAGG +A Y G R+ + NRT RA EL + + S+ LE+ E+
Sbjct: 1436 --VVGAGGTSRAAVYALHRLGVNRIGLVNRTRSRAEELVAAM-PTSWSIEVLEDI--EEA 1490
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHY--ALVFDAVYTPKITRLLREAEESGATIVSGL 500
M L I P D T +PK L ++ + Y +I G V+GL
Sbjct: 1491 MKLEPGIVISTVPS-DTTKVPKELLKRKGGGVLVELAY--EINSGYENVLGDGWKFVNGL 1547
Query: 501 EMFIGQAYEQYERFTG 516
E+ I Q +Q+E +TG
Sbjct: 1548 EILIEQGSKQFEIWTG 1563
>gi|327507679|sp|C8Z543.1|ARO1_YEAS8 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|259145368|emb|CAY78632.1| Aro1p [Saccharomyces cerevisiae EC1118]
Length = 1588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 240/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|375309511|ref|ZP_09774792.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375078820|gb|EHS57047.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 290
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 154/292 (52%), Gaps = 25/292 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTI 312
+ G++G P+ HSKSP+++ A ++ G G FV H+ D + + + F G + TI
Sbjct: 16 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 75
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK +K DE+D A+ IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 76 PHKVEVMKYLDEIDEGARLIGAVNTIV--NDNGRLKGYNTDGIGYVRSLKEE-------- 125
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSL 431
S L G V+GAGGA + + + + + V+I NRT ++A +LA+ A+ +
Sbjct: 126 --TSVELKGAKIAVLGAGGAARGVIHALLEERPESVMILNRTREKAEQLAKEWTTEAIPV 183
Query: 432 ADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
N ++ + +L NTTS+GM P DE P+ + +V D +Y P TRLLR
Sbjct: 184 TGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRLLR 243
Query: 488 EA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFN 538
E+ E+ G + GL MF+ Q +E FTG+ AP + + +L S +
Sbjct: 244 ESREQRGCIVHGGLGMFVYQGAVAFEYFTGI-----APAVDQMRAAVLRSLS 290
>gi|300914225|ref|ZP_07131541.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
gi|300889160|gb|EFK84306.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
Length = 292
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 147/276 (53%), Gaps = 20/276 (7%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AFKS+ N V+ +L + + +
Sbjct: 10 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGI 69
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D V A IGAVN ++ + G L GYNTD G I ++ +
Sbjct: 70 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNEE--GILKGYNTDVYGFIDSLTE-- 125
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 126 ---------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 176
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
D + N + IL NTTS+GM P +++P + + V+D +Y P
Sbjct: 177 KKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNP 236
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL+ A+++G +GL M + QA ++ +TG
Sbjct: 237 FETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|167040141|ref|YP_001663126.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307724540|ref|YP_003904291.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
gi|166854381|gb|ABY92790.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307581601|gb|ADN55000.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
Length = 284
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 147/276 (53%), Gaps = 20/276 (7%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AFKS+ N V+ +L + + +
Sbjct: 2 EINSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D V A IGAVN ++ + G L GYNTD G I ++ +
Sbjct: 62 KGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNEE--GILKGYNTDVYGFIDSLTE-- 117
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 118 ---------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 168
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
D + N + IL NTTS+GM P +++P + + V+D +Y P
Sbjct: 169 KKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNP 228
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL+ A+++G +GL M + QA ++ +TG
Sbjct: 229 FETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|390453029|ref|ZP_10238557.1| shikimate 5-dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 145/271 (53%), Gaps = 20/271 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTI 312
+ G++G P+ HSKSP+++ A + G G FV H+ D + + + F G + TI
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQVAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK +K DE+D A+ IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIV--NDNGRLKGYNTDGIGYVRSLKEE-------- 124
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSL 431
S L G V+GAGGA + + + + + V+I NRT D+A +LA+ ++ +
Sbjct: 125 --TSVELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLAQEWTTESIPV 182
Query: 432 ADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
N ++ + +L NTTS+GM P DE P+ + +V D +Y P TRLLR
Sbjct: 183 KGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRLLR 242
Query: 488 EA-EESGATIVSGLEMFIGQAYEQYERFTGL 517
E+ E+ G + GL MF+ Q +E FTG+
Sbjct: 243 ESREQRGCIVHGGLGMFVYQGAVAFEYFTGV 273
>gi|408419445|ref|YP_006760859.1| shikimate dehydrogenase AroE [Desulfobacula toluolica Tol2]
gi|405106658|emb|CCK80155.1| AroE: shikimate dehydrogenase [Desulfobacula toluolica Tol2]
Length = 281
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 147/275 (53%), Gaps = 25/275 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
TK++ I GKPV HSKSP+++N F+ N V++ +D+I+ + + + G S TI
Sbjct: 6 TKLYCIFGKPVTHSKSPLIHNACFQKHHMNSVYLAFEIDEISDGVKAMRTLNIKGASVTI 65
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P KE+ +K DE+D A SIGAVN ++ R +GKL GYNTDY A+S +
Sbjct: 66 PFKESIMKYLDEIDEEALSIGAVNTVVNR--NGKLIGYNTDYKAAVSPLR---------- 113
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ K +IGAGGA +A+AYG + ++VI NR +R ++LA +S+
Sbjct: 114 ---PFCIMNKKVCIIGAGGAAQAVAYGIHKEKGKLVIINRNKERGKKLASKYNAEFISMD 170
Query: 433 DLEN--FNPE--------DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
+ N + + I+ NTTSIGM P ++ P L +V D VYTP
Sbjct: 171 KMNQTEINKDAINKTGIINADIIINTTSIGMSPDIETCAFPSTLLDSRMIVMDIVYTPLK 230
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T+LL A+ G T + GL MF+ Q Q++ +T +
Sbjct: 231 TKLLSIAQSKGCTTIDGLSMFLHQGAAQFKLWTDI 265
>gi|392586617|gb|EIW75953.1| Pentafunctional AroM protein [Coniophora puteana RWD-64-598 SS2]
Length = 1637
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 232/506 (45%), Gaps = 56/506 (11%)
Query: 49 GADLVEIRLDGLK------------NFNP-----RENIKTLIKESPVPTLFTYRPIWEGG 91
G D +E+R+D L+ + P E + L + + +P +FT R + +GG
Sbjct: 1130 GVDALELRVDLLRAPKDLDKPVAPGTYIPPAAYVAEQLAALRRATSLPIVFTVRTVSQGG 1189
Query: 92 QY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTP 150
+ DG E E ++L LA++ G +Y+DVE+ ++ + + IV+S + ++
Sbjct: 1190 AFPDGAEKEAFELLELAVKNGVEYVDVEITFDQQRIKELATRAHRGHSQIVASF-HDWSG 1248
Query: 151 SVEDLSNLVA---RIQASGADIVKFATTALDITDVARVFQITVHSQV-----PIIGLVMG 202
S++ LV ++ + +DIVK A ++ D +F+ + PII + MG
Sbjct: 1249 SMKWSEALVKDKYKVASELSDIVKIVGKANELKDNFALFEFVSRVEAQPGAKPIIAINMG 1308
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
G +SR+L +T L + +APGQ + + + P + F + G P
Sbjct: 1309 AEGQLSRVLNRTLTP-VTHPLLPSK--AAPGQLSFAQIQQALHLAGQLPARRFF-LFGTP 1364
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ-TYSSNDFAGFSCTIPHKEAAVKC 321
+ S SP L+N F ++G + L D+ + + T +S DF G S TIPHK +
Sbjct: 1365 ISQSPSPTLHNTGFATLGLPHQYDLLETSDVGEQIRATLASPDFGGASVTIPHKLDVMPL 1424
Query: 322 CDEVDTVAKSIGAVNCIIRRQSDGK-----LFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
D + A++IGAVN II S+G L G NTD++G + I +
Sbjct: 1425 LDRLTPAAEAIGAVNTII-PTSEGASGARILVGDNTDWLGMRACILEKQ----------P 1473
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLE 435
S A +VIGAGG +A Y ++ GA R+ + NRT +A+ L + + + +
Sbjct: 1474 SLAAPAAALVIGAGGTARAAIYALQSLGAKRIYVHNRTAAKAQALVDAFPNARVEVVERL 1533
Query: 436 NFNPEDG--MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL---REAE 490
P D +I++ + + ET K +V D Y P T LL R
Sbjct: 1534 GAWPGDAPSVIISTVPASAGAAGLPETLFDKAVA--RGIVVDMAYKPAETPLLALARSVA 1591
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTG 516
VSG+E+ + Q YEQ+ER+TG
Sbjct: 1592 SQSWATVSGVEVLLAQGYEQFERWTG 1617
>gi|418096456|ref|ZP_12733568.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
gi|353769141|gb|EHD49662.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
Length = 506
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 231/495 (46%), Gaps = 59/495 (11%)
Query: 50 ADLVEIRLDGLKNFNPRENIKTLI-----KESPVPTLFTYRPIWEGGQYDGDENERVDVL 104
AD++E R D L P+E I + K + +FT R EGG+ D E + ++
Sbjct: 26 ADIIEWRADYL----PKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHLI 81
Query: 105 R-LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQ 163
+ +A DYID E ++ + + + +++S HN+Q TP E++ +++ +
Sbjct: 82 KEVAQFYQPDYIDFEYYSYKDVFEEML----DFPNLVLSYHNFQETP--ENMMEILSELT 135
Query: 164 ASGADIVKFATTA------LDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
+VK A A LD+ + R F+ T++ + + + MG+ G +SRI G
Sbjct: 136 ILNPKLVKVAVMAHTEQDVLDLMNYTRGFK-TLNPEQEYVTISMGKVGKVSRITADVTGS 194
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNF-RQMGPDTKVFGIIGKPVGHSKSPILYNEAF 276
+F +L+ VSAPGQ ++ + F ++ T++ ++ P+ HS SP ++N AF
Sbjct: 195 SWSFASLDE--VSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIHNRAF 252
Query: 277 KSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
++ NG +V ++ D+ + G + ++P+KE + D++ A+ IGA
Sbjct: 253 EATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGA 312
Query: 335 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
VN ++ +G L GYNTD G + S ++GK ++GAGGA K
Sbjct: 313 VNTVVNE--NGNLIGYNTDGKGFFKCLP-------------SFTISGKKMTLLGAGGAAK 357
Query: 395 ALAYGAKAKG-------ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI--- 444
++ A G R V +T +L E G + L LE + I
Sbjct: 358 SILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQT-GFKVDLCALEYVSELQARIAES 416
Query: 445 --LANTTSIGMQPKVDETPIPKH-ALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE 501
L N TS+GM + +P+P++ L LV D +Y P T L+ A G V+GL
Sbjct: 417 DLLVNATSVGMDGQ--SSPVPENIVLPETLLVADIIYQPFETPFLKWARSQGNPAVNGLG 474
Query: 502 MFIGQAYEQYERFTG 516
M + QA E ++ +TG
Sbjct: 475 MLLYQAAEAFQLWTG 489
>gi|406592611|ref|YP_006739791.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|406594387|ref|YP_006741890.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|410858665|ref|YP_006974605.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
gi|405782819|gb|AFS21567.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|405788483|gb|AFS27226.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|410811560|emb|CCO02213.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
Length = 477
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 226/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEIAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-NIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKQHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
A GQ +I+DLL YN+ + +++++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAQGQLSIEDLLA-YNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L K ++G+GG+ KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------LLQNKHVGIVGSGGSAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|308069993|ref|YP_003871598.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305859272|gb|ADM71060.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 289
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 145/271 (53%), Gaps = 20/271 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTI 312
+ G++G P+ HSKSP+++ A ++ G G FV H+ D + + + F G + TI
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRAMHFRGVNVTI 74
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK +K DE+D A+ IGAVN I+ +G+L GYNTD +G + ++++
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIV--NDNGRLKGYNTDGIGYVRSLKEE-------- 124
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSL 431
S L G V+GAGGA + + + + + V+I NRT D+A +LA A+ +
Sbjct: 125 --TSVDLKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAIPV 182
Query: 432 ADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
N + + + +L NTTS+GM P E P+ + +V D +Y P TRLLR
Sbjct: 183 RGYSNEDAKSVLATVNVLINTTSVGMSPLSGELPLEASLIPEGIIVSDLIYNPLETRLLR 242
Query: 488 EA-EESGATIVSGLEMFIGQAYEQYERFTGL 517
E+ E+ G T+ GL MF+ Q +E FTG+
Sbjct: 243 ESREQRGCTVHGGLGMFVYQGAVAFEYFTGV 273
>gi|389640335|ref|XP_003717800.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|374095368|sp|A4RD09.2|ARO1_MAGO7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|351640353|gb|EHA48216.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|440466367|gb|ELQ35639.1| pentafunctional AROM polypeptide [Magnaporthe oryzae Y34]
gi|440487854|gb|ELQ67619.1| pentafunctional AROM polypeptide [Magnaporthe oryzae P131]
Length = 1590
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 229/502 (45%), Gaps = 52/502 (10%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++ +P + L +P +FT R + +GG++ D D + +
Sbjct: 1089 GSDAVELRVDLLQDHSPEFVVRQVALLRSLCKMPIIFTVRTVSQGGRFPDADHAGALALY 1148
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
R+A+ +G +Y+DVE+ + + +++ K +I S H+ + T S + + + +A
Sbjct: 1149 RVALRMGVEYVDVEMTMPEDVIETVTKAK-GYTSIIASHHDPKGTLSWRNGAWMQYYNKA 1207
Query: 165 -SGADIVKFATTALDITD-----VARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGF 218
D++K D + + H PII L MGE+G +SR+L GF
Sbjct: 1208 LHYGDVIKLVGWCRTDEDNFSLLTFKTRMLAAHESTPIIALNMGEQGKLSRVL----NGF 1263
Query: 219 LTFGT-LENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
+T T +APGQ T ++ + P K F + GKP+ S+SPIL+N F+
Sbjct: 1264 MTPVTHAALPAAAAPGQLTAAEIRQALSLLSKIPKRK-FYLFGKPISKSRSPILHNTLFQ 1322
Query: 278 SVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G + L D +A+ T ++DF G S TIP K + DE+ AK+IGAVN
Sbjct: 1323 QTGLPHTYSRLETDKVAEVETTIRASDFGGASVTIPLKLDIMPMLDEITDAAKTIGAVNT 1382
Query: 338 IIR---RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
II + +L G NTD+ G + ++ V+G + +G VV+G+GG +
Sbjct: 1383 IIPVPVQAGKQRLRGDNTDWCGMVHSLR-----MAGVTGKRACPASG---VVVGSGGTTR 1434
Query: 395 ALAYGAKAKGARVVIANRTYDRARELA--ETVGGHALSLADLENFNP----EDGMILANT 448
A + + G + Y AR ET+ + D+ N +GM
Sbjct: 1435 AAIFALHSLGFSPI-----YIIARNATSVETIASSFPAEYDIRNLQGTLAYTEGMARPEV 1489
Query: 449 --TSIGMQPKVDE-----------TPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
++I VDE P+ G ++ + YTP T ++ A+++G
Sbjct: 1490 VISTIPATGDVDEGILMAVDSVLTLPMGTSNTGAARVLLEMAYTPTFTNMMARAKDAGWG 1549
Query: 496 IVSGLEMFIGQAYEQYERFTGL 517
V G E+ Q + Q++ +T +
Sbjct: 1550 TVPGFEVLAAQGWFQFQLWTDI 1571
>gi|365766615|gb|EHN08111.1| Aro1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1588
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 239/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETXSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|435846092|ref|YP_007308342.1| shikimate dehydrogenase [Natronococcus occultus SP4]
gi|433672360|gb|AGB36552.1| shikimate dehydrogenase [Natronococcus occultus SP4]
Length = 266
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 142/266 (53%), Gaps = 22/266 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSCT 311
V+G+IG PVGHS SP ++ A+ +G + +V D++ + + G + T
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAAYDELGIDARYVTFEPAPDELEAAIRGAEALGVCGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRLN 370
IP K ++ E D +A IGAVN I S + G+NTD GA+ A+ EDG+
Sbjct: 62 IPFKRDVLEFV-EPDELAGRIGAVNTI--DFSGPEPTGHNTDAAGALRALREDGV----- 113
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHAL 429
L +V+GAGGAG+A+++G GA V IANRT ARELA V G
Sbjct: 114 -------VLEDADVLVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAADVPGADGR 166
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
L DL + D +L N TS+GM+ D TP+P AL V DAVY P TRLLR+A
Sbjct: 167 GLEDLGDVL-ADADVLVNATSVGMEE--DATPVPAEALHGELAVLDAVYRPLETRLLRDA 223
Query: 490 EESGATIVSGLEMFIGQAYEQYERFT 515
E++GAT V G M + Q E +E +T
Sbjct: 224 EDAGATTVDGAWMLLYQGVEAFELWT 249
>gi|384107652|ref|ZP_10008550.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
gi|383870508|gb|EID86110.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
Length = 498
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 236/510 (46%), Gaps = 35/510 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV----PT 80
LIC+ + G+++++ + + + D++E+R D L EN + LI++ P P
Sbjct: 5 LICMTLTGKTIEE-DIKLSQKYEKFCDVLELRADHLD-----ENEQLLIRKFPALVKKPC 58
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELG-----ADYIDVELQVAREFNDSIRGKKPE 135
+ T R +GG + G++ R ++ A+ ++ V+ +
Sbjct: 59 ILTIRRDSDGGLWTGNDFSRTNLFGRALAFADPDKKRNFAYVDFEEDYHIPSIQDAAMAF 118
Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF-QITVHSQV 194
++I S HN T + +L ++ +G +I K A ++DV +F + ++ +
Sbjct: 119 GVRIIRSCHNM--TEPIHNLRKRCDAMRKTGYEIPKIAFMPKTLSDVVNLFHESSLMTNY 176
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGI--VSAPGQPTIKDLLDLYNFRQMGPD 252
I + MG G+ SRIL + ++T+ + + ++ G L DLYNF+ +
Sbjct: 177 DHILVAMGAEGMPSRILTSISNSYMTYTSPQETADKTASIGHIDPVVLNDLYNFKGISKS 236
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T++FGI G P+ + SP ++N ++ G + V+ + I++ D G S TI
Sbjct: 237 TQLFGITGWPLVKTSSPEIHNMGYRHHGIDAVYFPIRSQLISESLNFAEQLDVKGMSVTI 296
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P KE+ + E+ IGA N ++R+ + K GYNTD G A+ + L +
Sbjct: 297 PFKESVLYYLHELSPEVMQIGACNTVVRK--NYKWIGYNTDCTGFERALLEFLGSNVKTK 354
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
S + AGGA KA+AY K G + I NRT + A++LAE A L
Sbjct: 355 KMKVSIIG--------AGGAAKAIAYTVKKLGMKACIFNRTLETAQKLAEKYDFMAAKLD 406
Query: 433 DLENFN-PEDGMILANTTSIGMQPK----VDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+ E ++ TTS+GM + + PI + VFD VY P T ++R
Sbjct: 407 ETSAMILDEYSSLIIQTTSVGMNAEGPISPENDPIYFYKFRGTEKVFDIVYVPASTPVMR 466
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
A +G + +G +M QAYEQ++ FTG+
Sbjct: 467 RASAAGCKVCNGYKMLEYQAYEQFKLFTGV 496
>gi|406593670|ref|YP_006740849.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
gi|405789542|gb|AFS28284.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
Length = 477
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 226/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEIAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-NIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
A GQ +I+DLL YN+ + +++++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAQGQLSIEDLLA-YNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQINMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L K ++G+GG+ KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------LLQNKHVGIVGSGGSAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|336114442|ref|YP_004569209.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
gi|335367872|gb|AEH53823.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
Length = 280
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 156/282 (55%), Gaps = 31/282 (10%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTI 312
++G+IG P+ HS SP ++NEAF+++G + + H+ +++ + AGF+ TI
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGLDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK+A + D++D +A++IGAVN +IR + GYNTD G + A+++ GR+
Sbjct: 64 PHKQAIMPYLDDIDPLAETIGAVNTVIR--TPHGWVGYNTDGPGFMQALKEE-SGRV--- 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGH 427
L+G+ +VIGAGGA +A+ Y +GA V + NRT +A E+ +
Sbjct: 118 ------LSGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCPSK 171
Query: 428 ALSLADLE----NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
L+L + E N+ ++ TTSIGM P D P+ L A V D +Y P T
Sbjct: 172 VLTLKEAEEQLGNYT-----LIVQTTSIGMHPDTDAQPLSLRHLKPGAFVSDIIYNPFET 226
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP---GKMN 522
+ L+EA++ GA + +GL MFI Q +E++TG+ GKM
Sbjct: 227 KFLKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTGKMK 268
>gi|74620637|sp|Q8J294.1|ARO1_THACU RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|25005077|gb|AAN70992.1|AF482690_1 arom polypeptide [Thanatephorus cucumeris]
Length = 1618
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 236/516 (45%), Gaps = 78/516 (15%)
Query: 48 SGADLVEIRLD----------GLKNFNPRENIKT----LIKESPVPTLFTYRPIWEGGQY 93
+GAD +E+R+D G N + + T L S +P +FT R +GG +
Sbjct: 1114 AGADAIELRVDLLNPSGDPVTGPPNIPSLDFVATQLSALRHTSSLPVVFTVRTASQGGAF 1173
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT--- 149
D E E + LA+ G +YIDVE+ + + + +K ++I S H++
Sbjct: 1174 PDTAEKEAFALYNLALRHGVEYIDVEISWSDKKIQDLAARK-GASQIIASWHDWSGNMKW 1232
Query: 150 --PSVEDLSNLVARIQASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERG 205
V++ L R+ DIVK AL I D R F H+ P IG+ MG G
Sbjct: 1233 NGAVVKEKYALAERV----GDIVKIVGKALSIEDNFALRAFA-AAHTSKPFIGINMGAEG 1287
Query: 206 LISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR-QMGPDTKVFGIIGKPVG 264
+SR+L F ++ L +APGQ +++D+ + Q+ P + F + G P+
Sbjct: 1288 QLSRVLNTAFTP-VSHPLLPTR--AAPGQMSVQDIHTALHLNGQLAP--QKFYLFGSPIA 1342
Query: 265 HSKSPILYNEAFKSVGFNGVF----VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
HS SP L+N F+ +G + + D++ + + +F G S TIP K +
Sbjct: 1343 HSMSPHLHNTGFEKLGLPHKYHIFETATITDEVKAVIR---APEFGGASVTIPLKLDIIP 1399
Query: 321 CCDEVDTVAKSIGAVNCII-RRQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
DEV AK+IGAVN II R+++DG LFG NTD+ AI D R L V G+++
Sbjct: 1400 LLDEVSPEAKAIGAVNTIIPRKRADGSTSLFGTNTDW----RAIHDLARNNLVV--GITN 1453
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLADLEN 436
+V+GAGG +A Y A G + + + NRT A+ LA+T + D N
Sbjct: 1454 ETTA---LVLGAGGTARAALYAIHALGIKTIYLFNRTRAAAQALADTFPTFGIIPLDSLN 1510
Query: 437 FNPEDGMIL---------------ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
P+ + +++ + + P + E P +V + Y P
Sbjct: 1511 SFPKAAPTVVVSAIPATGTTTEKASDSAGVYLPPSLFEAP--------SGVVVEMAYKPA 1562
Query: 482 ITRLL-REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+T +L A+ SG V G+++ Q + QYE +TG
Sbjct: 1563 VTPVLGLAAKSSGWVGVRGVDILCEQGFYQYEAWTG 1598
>gi|403668288|ref|ZP_10933563.1| shikimate dehydrogenase [Kurthia sp. JC8E]
Length = 279
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 147/267 (55%), Gaps = 17/267 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K + +IG P+ HS SP ++N S G + ++ H+ + + F+ +GF+ T
Sbjct: 5 KWYAVIGDPIEHSMSPFMHNLWMTSEGRDATYIPLHVSRESLRASFEGMKVLGCSGFNVT 64
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKEA + DEVD +A+ +GAVN ++R Q+DGK GYNTD +G + ++ED
Sbjct: 65 IPHKEAIIPLLDEVDALAEKMGAVNTVVR-QADGKYKGYNTDGLGFVRSLEDV------- 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALS 430
V ++ + +V+GAGGA + + + +G R + IANRT ++AR + + ++
Sbjct: 117 ---VGTSHKQEKVLVLGAGGASRGICFALWQEGYRDITIANRTVEKARAICLEMDP-SVK 172
Query: 431 LADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
L+ + E G I+ TTS G+ PI L + A+V D VY P +T L +
Sbjct: 173 ACSLQQASDELGAYGIVIQTTSAGLNHSQFALPISLEHLANTAIVADIVYNPLMTPFLEQ 232
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFT 515
+++ GAT+V+GL MFI Q YE +T
Sbjct: 233 SQKQGATVVTGLGMFIHQGALAYEHWT 259
>gi|56698701|ref|YP_169079.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|56680438|gb|AAV97104.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
Length = 277
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 141/265 (53%), Gaps = 17/265 (6%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP L+ K+ G NG ++ + V D+A+ +T F G + TIPH
Sbjct: 10 GVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA + D++ A IGAVN +I R+ DG++ NTD G + + G G SG
Sbjct: 70 KEAVMSVADQITDRATLIGAVNTLIFRE-DGRILADNTDGYGFMENLRAGAPGWDPKSGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
VV GAGGA +A+ A+A V++ NRT RA +L + G +++AD
Sbjct: 129 A---------VVFGAGGAARAVISALAEAGVPEVIVTNRTRVRADKLKDDFG-QRVTVAD 178
Query: 434 LENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
ED ++ NTTS+GM K E +P L A+V D VY P TRLL EAEE
Sbjct: 179 WVQAGNVIEDARLVVNTTSLGMIGK-PELRVPLDGLRADAVVTDLVYAPLKTRLLAEAEE 237
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
G T V GL M + QA +ER+ G
Sbjct: 238 MGCTTVDGLGMLLHQAVPGFERWFG 262
>gi|452992543|emb|CCQ95970.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 288
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 140/262 (53%), Gaps = 22/262 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTI 312
V+ +IG P+ S SPI+ N +K +G N +++ V D+A + + GF+ T+
Sbjct: 9 VYCLIGNPIAKSLSPIINNSYYKIIGKNNIYLAFNVKEKDLADVINVFKILNIKGFNVTL 68
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK + ++ D + AK +GAVN + + +G+L GYNTD +G + ++E G
Sbjct: 69 PHKISIMEHLDSISDEAKILGAVNTV--KNKNGRLIGYNTDGMGFLKSLELEDVG----- 121
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSL 431
+ K +V+GAGGA A++ +G + ++I+NRT +A+ LAE + +
Sbjct: 122 ------VKDKTVLVLGAGGAANAISISLAKEGVKKIIISNRTLSKAKILAEKISRKFPKV 175
Query: 432 AD------LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L+N E I+ N TS+GM P +DE+PI H +++D +Y P+ T+L
Sbjct: 176 TSEYDSLKLKNVRKEKIDIIVNCTSVGMHPNIDESPINLHGFSENLIIYDIIYKPRRTKL 235
Query: 486 LREAEESGATIVSGLEMFIGQA 507
+ AE+ G ++GL M I QA
Sbjct: 236 MELAEKKGYYTINGLSMLINQA 257
>gi|407459542|ref|YP_006737645.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
gi|405786336|gb|AFS25081.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
Length = 477
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 224/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEMAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-NIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
A GQ +I+DLL YN+ + + +++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAQGQLSIEDLLA-YNYTNLSSEARIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPHELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G + L R N+ L K ++G+GG+ KA+A GA+
Sbjct: 309 IAGYNTDGLGLL-----NLLKRKNI------LLQNKHVGIVGSGGSAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L + + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLHAVSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFTEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|307354830|ref|YP_003895881.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571]
gi|307158063|gb|ADN37443.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571]
Length = 459
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 159/319 (49%), Gaps = 28/319 (8%)
Query: 205 GLISRILCAKFGGFLTFG--TLENGIVSA---PGQPTIKDLLDLYNFR-QMGPDTKVFGI 258
GL +C + GG + +G T+E +A P +++ + R + I
Sbjct: 150 GLAPEEICDRIGGIMNYGPCTVEERTKAAGFFKNSPMSEEMRERTLSRIGLAGAVPFCAI 209
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
G P HSKSP LY+ F G + + ++ DDI + + G S TIP KE
Sbjct: 210 AGNPCLHSKSPQLYSALFARYGIDSHYTYMQADDIRTIVEVMKTAGMKGLSVTIPFKEDV 269
Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
++C DE D ++ IGAVN ++ S G+L+G NTD++G I + LR A
Sbjct: 270 MECLDETDIHSQRIGAVNTVL--NSCGRLYGTNTDWIG----IREPLR-----------A 312
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
G VV GAGGA +A Y G V + NRT R LAE G S + E+F
Sbjct: 313 SEGNTAVVFGAGGAARAAVYALMDLGKEVTVINRTAGRGLALAEHFG---CSFSSPEDFR 369
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
PE+ I+ N TS+GM K +P+ + L ++ VFD VYTP T LL+ A+++G +
Sbjct: 370 PEETEIVVNATSLGMGGK--GSPMAEDQLRYHMTVFDLVYTPPETPLLKMAKKAGCKCIP 427
Query: 499 GLEMFIGQAYEQYERFTGL 517
G EMFI QA EQ+ + G+
Sbjct: 428 GTEMFIYQAAEQFRQLFGI 446
>gi|392870671|gb|EAS32492.2| pentafunctional AROM polypeptide [Coccidioides immitis RS]
Length = 1589
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 58/513 (11%)
Query: 49 GADLVEIRLDGL-----KNFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L N P E I L +P +FT R +GG++ D +
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS- 156
+ +D+ RLA+ +G++++D+E+ ++ K K+I S H+ + S + S
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHMLRAVTEMK-GFSKIIASHHDVSGSLSWANGSW 1189
Query: 157 -NLVARIQASGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISRIL 211
+ G DI+K A LD R F+ ++P+I + MGE+G +SRIL
Sbjct: 1190 GQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRIL 1248
Query: 212 CAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSP 269
GF+T + +APGQ + +D+ + MG + + F I GKPV S+SP
Sbjct: 1249 ----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSL--MGEIEPRKFAIFGKPVSASRSP 1302
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N F VG + L D++ + + DF G S TIP K + DE+ A
Sbjct: 1303 TMHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEA 1362
Query: 330 KSIGAVNCII---RRQSD----GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ IGAVN I+ R D +L GYNTD+ G + + RG+ +A+ G
Sbjct: 1363 QVIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCLR---RGKAISPSFADTAVPG- 1418
Query: 383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET--------VGGHALSLAD 433
+VIG GG +A + + G + + + R+ + E+A T V A SL +
Sbjct: 1419 --LVIGGGGTARAAIHALYSMGYSPIYLIGRSEAKVAEMASTFPEKYSVQVLKDATSLEN 1476
Query: 434 LENFN----PEDGMILANTTSIGMQ-----PKVDETPIPKHALGHYALVFDAVYTPKITR 484
L P D I + + + +VD K + ++ + Y P IT
Sbjct: 1477 LPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMAYKPDITP 1536
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L + A +SG + + GLE +GQ Q+E +TG+
Sbjct: 1537 LSQLASDSGWSTIPGLEALVGQGVHQFELWTGI 1569
>gi|384452778|ref|YP_005665375.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
gi|334695467|gb|AEG88683.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
Length = 477
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 225/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEIAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ P K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQKNYP-NIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
GQ +I+DLL YN+ + +++++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVVQGQLSIEDLLA-YNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L K ++G+GGA KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------LLQNKHVGIVGSGGAAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|326479819|gb|EGE03829.1| pentafunctional AROM polypeptide [Trichophyton equinum CBS 127.97]
Length = 1570
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 234/514 (45%), Gaps = 76/514 (14%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+ VE+R+D LK+ + E I L + +P +FT R +GG + D
Sbjct: 1074 GSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQGGLFPDNAV 1133
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYTPSVED 154
+E + + +LA+ +G++++D+E+ F D++ E K+I S H+ S +
Sbjct: 1134 DEALGLYKLAIRMGSEFVDLEIS----FPDNLLHAVTEIKGFSKIIASHHDVNGQLSWAN 1189
Query: 155 LSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISR 209
S + +A D++K A + D + Q ++ +PII + MG +G +SR
Sbjct: 1190 GSWIQYYNKALQYGDVIKLIGVAKSLGDNMALQQFKAWAEKSYPIPIIAINMGNKGRLSR 1249
Query: 210 ILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSK 267
IL GF+T +APGQ + K++ +G D K F + GKP+ S+
Sbjct: 1250 IL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTL--IGELDAKEFALFGKPISASR 1303
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N F GF + L D++ + S +F G S TIP KE ++ DE+
Sbjct: 1304 SPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELLDEISP 1363
Query: 328 VAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
AK IGAVN I+ +G KL GYNTD+ G ++D G + + G S+
Sbjct: 1364 EAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--GAIYLKKGESA------ 1415
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+ IG+GG +A Y + G + + + RT +LA + +N +
Sbjct: 1416 -LTIGSGGTARAAIYSLHSMGYSPIYLVGRTPANLTKLASSFPAE---------YNVQ-- 1463
Query: 443 MILANTTSIGMQPKVDETPIP-----------------KHALG--HYALVFDAVYTPKIT 483
++ + S+ PKV + IP K + G ++ D Y P +T
Sbjct: 1464 -VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELIALIMKRSQGGSDECIILDMAYKPDVT 1522
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ + A +G IV GLE+ + Q Q+E +TGL
Sbjct: 1523 AIAQLASPAGWKIVKGLEVLVAQGVYQFEHWTGL 1556
>gi|373859117|ref|ZP_09601849.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372451208|gb|EHP24687.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 279
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 21/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG P+ HS SPI+ N+ F++ + + H+ +++ + S +GF+ T
Sbjct: 3 KLFGVIGDPIAHSMSPIMQNDLFQNYSMDAHYFPFHVKKEELVDAIKGLKSLGVSGFNIT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK A + D++D +A +IGAVN ++ DGKL G+NTD G + + + +
Sbjct: 63 VPHKVAIIPLLDQIDPLASAIGAVNTVVN--IDGKLTGFNTDGNGYVRGLTEQI------ 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALS 430
+ L K ++IGAGGA +AL + AKA R+ I NRT +A L E H S
Sbjct: 115 -----TNLQDKSVLMIGAGGAARALYFSLAKAGVKRLDICNRTKVKAYTLIEECPYHVDS 169
Query: 431 LADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A E E+ + ++ TTSIGM P ++ P+ L V D +Y P T LL
Sbjct: 170 TA-YEMKEAEERLGEYDVIIQTTSIGMSPHTEDIPLSLEHLKAGTFVSDIIYNPLETALL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
REA++ GA I +GL+MF+ Q +E +TG+
Sbjct: 229 REAKQKGAIIQNGLDMFVFQGALAFEIWTGI 259
>gi|119186687|ref|XP_001243950.1| hypothetical protein CIMG_03391 [Coccidioides immitis RS]
Length = 1543
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 58/513 (11%)
Query: 49 GADLVEIRLDGL-----KNFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L N P E I L +P +FT R +GG++ D +
Sbjct: 1025 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1084
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS- 156
+ +D+ RLA+ +G++++D+E+ ++ K K+I S H+ + S + S
Sbjct: 1085 DAALDLYRLAVRMGSEFVDLEVTFPEHMLRAVTEMK-GFSKIIASHHDVSGSLSWANGSW 1143
Query: 157 -NLVARIQASGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISRIL 211
+ G DI+K A LD R F+ ++P+I + MGE+G +SRIL
Sbjct: 1144 GQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRIL 1202
Query: 212 CAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSP 269
GF+T + +APGQ + +D+ + MG + + F I GKPV S+SP
Sbjct: 1203 ----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSL--MGEIEPRKFAIFGKPVSASRSP 1256
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N F VG + L D++ + + DF G S TIP K + DE+ A
Sbjct: 1257 TMHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEA 1316
Query: 330 KSIGAVNCII---RRQSD----GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ IGAVN I+ R D +L GYNTD+ G + + RG+ +A+ G
Sbjct: 1317 QVIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCLR---RGKAISPSFADTAVPG- 1372
Query: 383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET--------VGGHALSLAD 433
+VIG GG +A + + G + + + R+ + E+A T V A SL +
Sbjct: 1373 --LVIGGGGTARAAIHALYSMGYSPIYLIGRSEAKVAEMASTFPEKYSVQVLKDATSLEN 1430
Query: 434 LENFN----PEDGMILANTTSIGMQ-----PKVDETPIPKHALGHYALVFDAVYTPKITR 484
L P D I + + + +VD K + ++ + Y P IT
Sbjct: 1431 LPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMAYKPDITP 1490
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L + A +SG + + GLE +GQ Q+E +TG+
Sbjct: 1491 LSQLASDSGWSTIPGLEALVGQGVHQFELWTGI 1523
>gi|323349301|gb|EGA83528.1| Aro1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1588
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 238/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCXAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETXSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|327507676|sp|B3LGE9.1|ARO1_YEAS1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|190404911|gb|EDV08178.1| 3-dehydroquinate dehydratase [Saccharomyces cerevisiae RM11-1a]
Length = 1588
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 239/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R + +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFLDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETGSAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG G A
Sbjct: 1560 LVHQGVAQFEKWTGFKGPFKA 1580
>gi|256752529|ref|ZP_05493385.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748595|gb|EEU61643.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 292
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 148/276 (53%), Gaps = 20/276 (7%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AF S+ N V+ +L + + + + +
Sbjct: 10 EINANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTVFDVLPEKLEEAVKGVKALGI 69
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D + A IGAVN ++ + G L GYNTD G I ++ +
Sbjct: 70 RGVNVTVPHKEKIIKYLDVISEEALKIGAVNTVVNEE--GILKGYNTDVYGFIDSLTE-- 125
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 126 ---------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 176
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
D + N + IL NTTS+GM P +++P + + V+D +Y P
Sbjct: 177 KKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNP 236
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL+ A+++G +GL M + QA ++ +TG
Sbjct: 237 FETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|158319101|ref|YP_001511608.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
gi|166988268|sp|A8MEE1.1|AROE_ALKOO RecName: Full=Shikimate dehydrogenase
gi|158139300|gb|ABW17612.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
Length = 286
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 25/276 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
+TK+ GIIG+P+ S SP ++N AF+ + N +++ ++ D++K + F GF+
Sbjct: 8 ETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFRGFN 67
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHK + DEV AK IGAVN ++ + +GKL G+NTD G + ++ED
Sbjct: 68 VTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLED------ 119
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG--- 425
G+ + K FV+ GAGGA +++A GA ++ I NRT D+A ++A+ +G
Sbjct: 120 ---EGIY--VKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQLIGMSI 174
Query: 426 -GHALSLADLENFN----PEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVYT 479
+ + LEN E+ +L NTTS+GM +E+ I + L +V D +Y
Sbjct: 175 PNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVVSDLIYN 234
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
P T+LL++AE G ++GL M IGQA +E +T
Sbjct: 235 PAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWT 270
>gi|366990411|ref|XP_003674973.1| hypothetical protein NCAS_0B05170 [Naumovozyma castellii CBS 4309]
gi|342300837|emb|CCC68601.1| hypothetical protein NCAS_0B05170 [Naumovozyma castellii CBS 4309]
Length = 1569
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 231/498 (46%), Gaps = 39/498 (7%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTLIK-----ESPVPTLFTYRPIWEGGQY-DGDENERVD 102
G D VE+R+D L +++ + I T + + +P +FT R +GG + D D + +
Sbjct: 1080 GCDAVEVRIDHLAHYD-SDFINTQLAILRTATNSLPIIFTIRTKKQGGNFPDNDYDAMDE 1138
Query: 103 VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED--LSNLVA 160
+ A++ G +YID+EL + + K K+I S H++ + S +D N
Sbjct: 1139 LYSTALKSGVEYIDLELTLPTSIQYKVLNNK-GYTKIIGSHHDFAASYSWDDPEWENRYN 1197
Query: 161 RIQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
+ + D+VKF TA + D + H P+I + M E G +SR+L +
Sbjct: 1198 QALSLDVDVVKFVGTATEFKDNLMLENFRNCHQAKPLIAINMTELGKVSRVLNTILTP-I 1256
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N SAPGQ +++ + ++Y G +K F ++G P+GHS+SP+L+N +K +
Sbjct: 1257 TSELLPNA--SAPGQLSLRQINEIYT-SMGGFISKDFYVVGSPIGHSRSPVLHNTGYKLL 1313
Query: 280 GFNGVFVHLLVDDIAKFFQT--YSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F D + + ++ G + TIP K ++ E+ A+ IGAVN
Sbjct: 1314 GLPNNFDKFETDSAEEVNKKLLLGKSNLGGLAVTIPLKLDIMRYMTELTEAAEHIGAVNT 1373
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I GK G NTD++ G+R L ++ GV ++ G ++IGAGG +A
Sbjct: 1374 VIPL-GHGKFKGDNTDWL--------GIRNSL-IANGVPESVRGSAGLIIGAGGTSRAAI 1423
Query: 398 YGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGMQ 454
+ G +++ + NRT + EL + + +++ +E + I + +
Sbjct: 1424 FALHKMGCSKIFMINRTTSKLEELKKDFPEKYNIVAVNSIEQAEQDKEPIGVAVSCVPAD 1483
Query: 455 PKVDETPIPKHAL--------GHYALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIG 505
+DE + K G + +A Y P +T ++R A++ +V G +M +
Sbjct: 1484 KPLDEVLLSKLERFLSKGLKSGFRPTLLEAAYKPAVTPIMRLAKDKYEWQVVPGAQMLVN 1543
Query: 506 QAYEQYERFTGLPGKMNA 523
Q Q+E +TG A
Sbjct: 1544 QGVAQFEIWTGFKAPYRA 1561
>gi|410460448|ref|ZP_11314126.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
gi|409927063|gb|EKN64209.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
Length = 279
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 148/269 (55%), Gaps = 20/269 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG++G PVGHS SPI++N+ F +G + + V +++ + +GF+ T
Sbjct: 3 KLFGLLGHPVGHSMSPIMHNDQFSFLGLDCYYHAFDVHPNELENAVNGIKALGLSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK +K DE+D A IGAVN ++ R DGKL+GYNTD G +++ +
Sbjct: 63 IPHKVEIMKYLDEIDEEALQIGAVNTVVNR--DGKLYGYNTDGKGFAVSLQ-------TI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAET----VGG 426
+G + K +++GAGGA + + GA + IANRT ++A EL V
Sbjct: 114 AG---ADFLNKKMLIVGAGGAARGVFVTLARMGANAIDIANRTVEKAEELISNNPYRVQS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+A S+ + E N + I+ NTTS+GM PK++E P+ + ++ D +Y P T+ L
Sbjct: 171 NARSIKEAEK-NLAEYQIIINTTSVGMSPKIEELPLQLTNMQPGTILSDIIYNPLETKWL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFT 515
+E + +GA +G+ MF+GQ +E +T
Sbjct: 230 KEGKIAGAVTQNGIGMFVGQGALAFEMWT 258
>gi|328949355|ref|YP_004366692.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
gi|328449679|gb|AEB15395.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
Length = 497
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 235/512 (45%), Gaps = 42/512 (8%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
IC+ + G+++ + + + K S D+ E+R+D L N + R + + +P + T R
Sbjct: 6 ICLTLTGKTLAEDLELLNKYR-SYVDMAELRVDFL-NQDERLYARRFPSMAGLPCILTIR 63
Query: 86 PIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVELQVA-REFNDSIRGKKPEKC 137
+GG++ E+ R + A+ + Y+D E D+ +
Sbjct: 64 REIDGGKFVEGESARTILFARALSFADEDKTKNFAYVDFEEDFHISSLEDATLAF---ET 120
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF-QITVHSQVPI 196
KVI S H+ + V ++ + + SG +I K A + DV +F Q + S
Sbjct: 121 KVIRSFHDMK--NPVRNILERLKELNPSGLEIPKIAFMPHSLDDVTNLFEQASKISGNNH 178
Query: 197 IGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIK--DLLDLYNFRQMGPDTK 254
I L MG G+ +R+L AK FLT+ + I + + L LY + + TK
Sbjct: 179 IMLAMGTMGIPTRVLGAKLKNFLTYTSAPESIQNTSNIAHLDAVKLGGLYRTKSINESTK 238
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
+FGI G P+ + SP L+N + G N V++ + + G S T+PH
Sbjct: 239 IFGITGWPLSGTSSPELHNTGYCRHGMNAVYIPFPAEKFEQAIDFSEQVGVQGLSVTVPH 298
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEAA+ D VD A IG+ N +I++ DGK YNTD G + A+ + L +
Sbjct: 299 KEAALARADFVDNAALEIGSSNTLIKK--DGKWLAYNTDAEGFLKALLEFLNLK------ 350
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
L K +IGAGGA KA+AY G + I NRT +A+ELAE + A L
Sbjct: 351 ---NLKHKKISIIGAGGAAKAIAYAVYNSGGKACIFNRTLSKAKELAEK---YDFKYAPL 404
Query: 435 ENFNPEDGM-----ILANTTSIGM---QPKVDET-PIPKHALGHYALVFDAVYTPKITRL 485
NF + ++ TTS GM +P E P+ + +FD +Y PK T +
Sbjct: 405 -NFESVSTIRKYSDVIIQTTSKGMHCEEPSNPENDPLYFYDFTGKEALFDIIYMPKATPI 463
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ A E+G I +G M + Q Y Q+E +TG+
Sbjct: 464 MVRAREAGCKICNGFSMLLYQGYRQFELYTGV 495
>gi|345017564|ref|YP_004819917.1| shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032907|gb|AEM78633.1| Shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 292
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDF 305
++ +TK++G+IG PV HS SP+++N AFKS+ N V+ +L + + + + +
Sbjct: 10 KINANTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEEAVKGVKALGI 69
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D V A IGAVN ++ G L GYNTD G I ++ +
Sbjct: 70 RGVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVV--NEGGILKGYNTDVYGFIDSLTE-- 125
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
V + G+ VV+GAGGA KA+ KG ++IANR+ +RA++L+E +
Sbjct: 126 ---------VGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEYI 176
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
D + N + IL NTTS+GM P +++P + + V+D +Y P
Sbjct: 177 KREFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYNP 236
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLY 527
T LL+ A+++G +GL M + QA ++ +TG N ++Y
Sbjct: 237 FETALLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGEFFDKNLVYMY 283
>gi|312127119|ref|YP_003991993.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
gi|311777138|gb|ADQ06624.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
Length = 281
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 146/273 (53%), Gaps = 27/273 (9%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYSSNDFAGFSCTIP 313
+IGK + HS SP ++N + ++ +L + D K + D GF+ TIP
Sbjct: 6 LIGKSLKHSISPFIHNTILSEFDIDAIYSNLELSDTEKLKEFVEMVRKDKDVVGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE ++ CDEV + I A N + ++ DGK YNTD++G ++ED RG G
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKFLAYNTDWIGFKKSLED--RG-----G 116
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRAREL----AETVGGHA 428
V K +++G+GGA KA YG GA+ V IANRTY++A+ L E V
Sbjct: 117 DVKD----KKILILGSGGAAKACIYGLYRMGAKEVFIANRTYEKAQALRQQYKEIVDLKI 172
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+ +++EN + + IL NTT IGM P VD +PI LV+D +Y P T+LL+
Sbjct: 173 IKWSEIENVSYD---ILINTTPIGMYPDVDISPINTLNFT-VELVYDMIYNPYKTKLLQL 228
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL-PGK 520
AE +G I++GL M I QA E + + G+ P K
Sbjct: 229 AEINGKKILNGLPMLIYQAIEAEKIWFGIEPDK 261
>gi|297170988|gb|ADI22003.1| shikimate 5-dehydrogenase [uncultured myxobacterium HF0200_01L06]
Length = 274
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 150/267 (56%), Gaps = 22/267 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T + GI+ P GH++SP ++N AF+++G + ++ V DD+ + +
Sbjct: 9 TALCGILLHPAGHTRSPAMHNAAFEALGIDASYLAFDVHPDDLEAALSGARALGVRQLAI 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK A + DEVD+VA++IGAVN + G+ G NTD++GA+ A+E
Sbjct: 69 SLPHKIAVLDHLDEVDSVAQAIGAVNTVTF--DGGRARGTNTDWLGAVEALER------- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-AL 429
+ +A + VV+GAGG +++ YG +GA V + NRT RA ELA +G A
Sbjct: 120 -----EAPIAQQHAVVLGAGGTARSVVYGLLQRGATVSVLNRTEARAEELAAELGAQQAG 174
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
LA L++ + +L NTTS+G+ + D +P+ L A+V DAVY P+ TRLLR+A
Sbjct: 175 PLASLKSTAYD---LLVNTTSVGL--RSDRSPVAPSDLREQAVVLDAVYDPETTRLLRDA 229
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
+ +GA V G M + QA EQ +TG
Sbjct: 230 QAAGAATVQGKWMLVYQAAEQLRIWTG 256
>gi|268324616|emb|CBH38204.1| probable shikimate 5-dehydrogenase [uncultured archaeon]
Length = 272
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 152/267 (56%), Gaps = 21/267 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K++GIIG P+ HS SP+++N AFK +G + V++ + ++++ + S +G + T
Sbjct: 3 KIYGIIGDPIAHSLSPVMHNAAFKKLGLDAVYLAFRVTLEELGDAIRGAKSLGISGLNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP KE A+ + VAK IGA+N I + GYNTD +GA+ +E+ +
Sbjct: 63 IPLKEKALSFV-ATEEVAKKIGALNTIDFSSTPS---GYNTDGIGALMVLEETV------ 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALS 430
+ GK +++GAGGA +A+++ A GA V +ANRT R+ +LA + +++S
Sbjct: 113 -----GEIRGKNVLILGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANSIS 167
Query: 431 L-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
L A+L+N D IL N TS+GM PK D T I + +VFD VY P T+LL+EA
Sbjct: 168 LGAELKN-QIGDSDILINATSVGMHPKEDATLITADLMHPDLVVFDIVYNPIETKLLKEA 226
Query: 490 EESGA-TIVSGLEMFIGQAYEQYERFT 515
+ +G IV G++M + Q ++ +T
Sbjct: 227 KRAGVKKIVDGVKMLVYQGAASFKLWT 253
>gi|448318951|ref|ZP_21508461.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
gi|445597479|gb|ELY51554.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
Length = 266
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 139/265 (52%), Gaps = 20/265 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ + +V D++ + + G + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELALEARYVTFEPAPDELEAAIRGAGALGIRGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K ++ E D +A IGA N I S + G+NTD GA+ A+ D
Sbjct: 62 IPFKRDVLEFV-EPDELASRIGAANTI--DFSGAEPTGHNTDAAGALRALRDH------- 111
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHALS 430
GV AL G +V+GAGGAG+A+++G GA V IANRT AREL AE G
Sbjct: 112 --GV--ALEGADALVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAAEVPGADGRG 167
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L DLE+ +D +L N TS+GM+ D TP+P L V DAVY P TRLLR+A
Sbjct: 168 LEDLEDAV-DDADVLVNATSVGMEE--DATPVPSEVLHGELAVLDAVYRPLETRLLRDAA 224
Query: 491 ESGATIVSGLEMFIGQAYEQYERFT 515
+GAT V G M + Q E +E +T
Sbjct: 225 AAGATTVDGAWMLLYQGVEAFELWT 249
>gi|407455557|ref|YP_006734448.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|407458292|ref|YP_006736597.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|407460913|ref|YP_006738688.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449071371|ref|YP_007438451.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
gi|405782100|gb|AFS20849.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|405784707|gb|AFS23453.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|405787510|gb|AFS26254.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449039879|gb|AGE75303.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
Length = 477
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 226/483 (46%), Gaps = 46/483 (9%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + E +K LI + P+ TL + E ER ++LA
Sbjct: 26 DSIELRIDYLLSLSSDE-LKHLIALAKKPILTLRKNPSLSEIAWI-----ERT--IQLA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168
EL +Y+D++ +E I+ K K+I+S H + + E + NL + A
Sbjct: 77 ELQPEYLDIDKDFPKEALAKIQ-KNYLNIKIILSYH----SDTSEHIPNLCNEMLRRQAH 131
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
K A T+ D R QI H L MG G+ SRIL + + + N
Sbjct: 132 HYKIAITSTKSIDTLRCIQIKQHLPENTTLLCMGNAGIASRILSPLMKNAINYASGINAP 191
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
A GQ +I+DLL YN+ + +++++G+IG PV S S + +N+ F + N ++ +
Sbjct: 192 KVAQGQLSIEDLLA-YNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLNMSYIKI 250
Query: 289 LVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK 346
L+ ++ +FF F G S T+P K ++ D +D + + N ++ R D K
Sbjct: 251 LLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVFR--DNK 308
Query: 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR 406
+ GYNTD +G ++ L R N+ L K ++G+GG+ KA+A GA+
Sbjct: 309 IAGYNTDGLGLLN-----LLKRKNI------LLQNKHVGIVGSGGSAKAIATTFADSGAQ 357
Query: 407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA 466
+ I NRT A +L+ G A L L + D +IL + P V+ IP+
Sbjct: 358 ISIFNRTKTHAEKLSVLCHGQAFPLNALSENHNIDILILC------LPPDVE---IPE-- 406
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
+ ++ D PK + ++A+E G I+ G EMF QA Q+ + P K++ +
Sbjct: 407 -IYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW--FPDKLSQENR 463
Query: 527 YKF 529
+F
Sbjct: 464 EQF 466
>gi|167524479|ref|XP_001746575.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774845|gb|EDQ88471.1| predicted protein [Monosiga brevicollis MX1]
Length = 1520
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 215/481 (44%), Gaps = 37/481 (7%)
Query: 48 SGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL 104
+ A VE+R+D L + + + + P +FT R +GG+Y G + +L
Sbjct: 1029 ANAQAVELRVDLLASLTEDYIATQVAAIRSATKSPIIFTVRTEPQGGRYAGSPAKYAALL 1088
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
R+ + LG + +DVE + + + P ++ S H + ++L+ +
Sbjct: 1089 RVGIRLGCEIVDVEADLPSDELRQLTRLVPASTTLLGSLHFLRPCGGAQELTAALHNCAL 1148
Query: 165 SG-ADIVKFATTA------LDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
G AD++K TA L + + RV + T+ P I + MG+ G ++R+L +
Sbjct: 1149 GGRADLLKVIFTADTPGDALALVEAYRVLRGTLSR--PAIVMAMGQAGKLTRVLNDQLTP 1206
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
+T L +APGQ T + L D+ + P F + G+P+ S SP+++N F
Sbjct: 1207 -VTHRLLTTA--AAPGQLTAQQLDDMRAELGLFPKRNFF-LFGEPIALSASPLMHNTVFA 1262
Query: 278 SVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
+ + + + G S T+P KE +VD + IGAVN
Sbjct: 1263 DLKLPYTYQRCSTSNALDAITCLQGTNCGGGSVTMPLKERLGHVLVDVDVPGRVIGAVNT 1322
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
I++ S G+L G+NTDY+G ++A+ D G SA L V+GAGG +A
Sbjct: 1323 IVK-DSQGQLHGFNTDYLGILAALRDA---------GAPSAPRAAL--VLGAGGTARAAV 1370
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQP 455
Y + G R+V+ NRT +RA LAE HA ADL I+ +T +
Sbjct: 1371 YALQQLGCHRIVVVNRTAERALALAEQFRVEHA---ADLMASTAYTYDIVVSTVAATANL 1427
Query: 456 KVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
V E + +V DA Y P T L+ +AE +G + G++M + Q Q + F
Sbjct: 1428 TVPEVLL----TASRPVVLDAAYIPYKTALILQAEAAGCRVAHGIDMLLHQGLAQAQLFC 1483
Query: 516 G 516
G
Sbjct: 1484 G 1484
>gi|380473533|emb|CCF46240.1| pentafunctional AROM polypeptide [Colletotrichum higginsianum]
Length = 1581
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 226/508 (44%), Gaps = 65/508 (12%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE-NERVDVL 104
GAD VE+R+D L++++ + L + VP +FT R +GG++ D ++ + +
Sbjct: 1076 GADAVELRVDLLQDYSEDSVAHQVALLRSVADVPIIFTLRTKAQGGKFPDDAYDQGLGLY 1135
Query: 105 RLAMELGADYIDVELQVA-REFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQ 163
R A+ +G ++IDVE+ + R + K P C++I S H+ S ++ S + +
Sbjct: 1136 RKAIRMGVEFIDVEMTLPERVIQTVVENKGP--CRIIASHHDPTGNLSWKNGSWIPFYNK 1193
Query: 164 A-SGADIVKFATTALDITDVARVF----QITVHSQVPIIGLVMGERGLISRILCAKFGGF 218
A D++K A I D + ++ + PII L MG G +SR+L G
Sbjct: 1194 ALQWGDVIKLVGVAQRIEDNYDLAHFKSEMLSSHKTPIIALNMGTAGKLSRVLN---GCL 1250
Query: 219 LTFGTLENGIVSAPGQPTIKDLLDLYNFRQM-----GPDTKVFGIIGKPVGHSKSPILYN 273
+APGQ L RQ G D F + GKP+ S+SP L+N
Sbjct: 1251 TPVSHPALPFKAAPGQ------LSAAEIRQALALLGGIDPLSFYLFGKPISASRSPALHN 1304
Query: 274 EAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIG 333
F G + D+ A + + DF G S TIP K +K DE+ A+ IG
Sbjct: 1305 TLFALAGLPHEYFRKETDNAADVREIIRAPDFGGASVTIPLKLDIMKEIDEISEAARVIG 1364
Query: 334 AVNCIIRRQ----SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA 389
AVN I+ + SD KL G NTD+ G + +++ + +GG SA+ VIG+
Sbjct: 1365 AVNTIVPTRASGSSDTKLVGDNTDWSGMVHSLQSAGVASRSSTGGQCSAM------VIGS 1418
Query: 390 GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HALSLADLENFNPEDGMILANT 448
GG +A + +A G + A LA G L + +F E +
Sbjct: 1419 GGTTRAAIFALRALGFGPIYA---------LARNSGNLETLKASFPPDFGIEALKSASEA 1469
Query: 449 TSIGMQPKVDETPIP-----------------KH--ALGHYALVFDAVYTPKITRLLREA 489
+++ P V + IP +H A ++ + Y P+ T L++ A
Sbjct: 1470 SALSTSPTVIVSTIPADKPVDASLRETLVAVLRHGTATDEKRVLLEMAYQPRHTPLMQLA 1529
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
EE+G + GLE+ Q + Q++++T +
Sbjct: 1530 EEAGWETIPGLEVLSAQGWHQFQKWTDI 1557
>gi|84489456|ref|YP_447688.1| hypothetical protein Msp_0647 [Methanosphaera stadtmanae DSM 3091]
gi|121724206|sp|Q2NGK8.1|AROE_METST RecName: Full=Shikimate dehydrogenase
gi|84372775|gb|ABC57045.1| AroE [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 144/275 (52%), Gaps = 26/275 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T + G+IG P+ HS SP ++N A+K + + +V H+ V+++ + + + G +
Sbjct: 6 TLITGVIGHPIEHSFSPPMHNNAYKLMNMDYKYVPFHVEVENLKHVITSAKTLNIKGLNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK + DE+D A+ IGAVN I + DG GYNTD +GAI +IE
Sbjct: 66 TIPHKTTIIPYLDEIDETAEKIGAVNTINFK--DGIAKGYNTDGIGAIVSIEK------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA- 428
++L K ++IGAGGA KA+ + K ++++ANR+ D A++L +
Sbjct: 117 -----YTSLKDKNIMIIGAGGASKAITFTLLNKNINQLIVANRSKDNAQKLITNLKNQTN 171
Query: 429 LSLADLENFNPEDGMI-----LANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPK 481
D N D +I + NTT IGM PK DE PI + V D +Y P
Sbjct: 172 FENIDFINIKKTDNVIDDVDIIINTTPIGMYPK-DEVAPPIKTDKISSKHTVMDIIYNPL 230
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+LL+++++ GAT + G M I Q + +E FTG
Sbjct: 231 ETQLLKQSKKQGATTIPGTHMLINQGIKAFEIFTG 265
>gi|323305645|gb|EGA59386.1| Aro1p [Saccharomyces cerevisiae FostersB]
gi|349577192|dbj|GAA22361.1| K7_Aro1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1588
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 238/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKIIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG A
Sbjct: 1560 LVHQGVAQFEKWTGFKAPFKA 1580
>gi|392300242|gb|EIW11333.1| Aro1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1588
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 238/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKIIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG A
Sbjct: 1560 LVHQGVAQFEKWTGFKAPFKA 1580
>gi|327507678|sp|A6ZY89.1|ARO1_YEAS7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|151942113|gb|EDN60469.1| 3-dehydroquinate dehydratase (3-dehydroquinase) [Saccharomyces
cerevisiae YJM789]
Length = 1588
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 238/501 (47%), Gaps = 45/501 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKIIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ + + +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAV---SCV 1499
Query: 452 GMQPKVDETPIPKHAL-----GHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D+ + K H A V +A Y P +T ++ +++ +V G +M
Sbjct: 1500 PADKPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQM 1559
Query: 503 FIGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG A
Sbjct: 1560 LVHQGVAQFEKWTGFKAPFKA 1580
>gi|254826875|ref|ZP_05231562.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258599255|gb|EEW12580.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 289
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 35/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-----LVDDIAKFFQTYSSNDFAG 307
T++ G+IG PV HSKSPI+YN +F+ G + ++ V D K +T+ + G
Sbjct: 9 TRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF---NLRG 65
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 66 ANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA--- 120
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAET 423
S +AGK +IGAGGA A+ GA+ + I + YD+A++ A +
Sbjct: 121 --------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAAS 172
Query: 424 VGG-------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+ H L D E N E IL N T +GM P ETPI ++ L+
Sbjct: 173 IKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIV 232
Query: 475 -DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D +Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 233 ADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|350271939|ref|YP_004883247.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348596781|dbj|BAL00742.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 23/277 (8%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV---DDIAKFFQTYSSNDFAGF 308
DTK+ G++G P+ S S L N ++ G + ++ + V D + + + +FAGF
Sbjct: 7 DTKMIGLLGTPLRQSVSYKLQNRVYEQAGLDYFYLPIEVSTEDRLPAVVEGIRAMNFAGF 66
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
+ T P+KE +K DE D + +GA N + R DGKL GYNTD +G + ++E
Sbjct: 67 AITKPYKETILKYLDERDDLVTKMGACNTVAVR--DGKLIGYNTDGIGCVRSLE------ 118
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
V GG+ + GK F GAGGA +A+ + +GA+ ++ + R LAE +
Sbjct: 119 --VDGGLD--IKGKTFFSFGAGGAARAVCFELACRGAKQIVISSASQRCEHLAEDINRLF 174
Query: 429 LSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
L E+ M +L N + IGM P + E+P+ K + L +DAVY P
Sbjct: 175 PGLCVPVRLTDEERMYEYIRQADVLLNMSGIGMAPHLGESPMKKDRFQPHQLCYDAVYDP 234
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ TR L++AE + I++GL M I Q EQ + +TG+
Sbjct: 235 EKTRFLQDAEAARCRILNGLGMVIYQGLEQIKIWTGV 271
>gi|409043576|gb|EKM53058.1| hypothetical protein PHACADRAFT_210784 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1377
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 239/508 (47%), Gaps = 56/508 (11%)
Query: 48 SGADLVEIRLDGLKN------FNPR--------ENIKTLIKESPVPTLFTYRPIWEGGQY 93
+G D VE+R+D L++ F P E I L +++ +P +FT R + +GG +
Sbjct: 867 AGVDAVEVRVDLLRSPVDTESFEPYIPPTAYVCEQIAALRQKTNLPIVFTCRTVSQGGSF 926
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTP 150
D E + D+ A+ LG +YIDVEL +++ D++ +K ++I S H++ +
Sbjct: 927 PDTAEKQAFDLFHAALRLGVEYIDVELTWSKKQIDALVQRK-GSSQIIASYHDWSGNFKW 985
Query: 151 SVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-----VHSQVPIIGLVMGERG 205
++ R A G DIVK A + D +++ PII + MG G
Sbjct: 986 GTAQSKDVYDRAAAFG-DIVKIVGKANNFEDNFSLYRFVEERTKADGSKPIIAINMGVEG 1044
Query: 206 LISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGH 265
SRIL F +T L + +APGQ + + + N + P + F + G P+
Sbjct: 1045 QTSRILNKTFSP-VTHPLLPSK--AAPGQLSFVQIQNALNLLGLLPSKRFF-LFGNPISQ 1100
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS-NDFAGFSCTIPHKEAAVKCCDE 324
S SP ++N A + +GF + L + + + + + +F G S TIP+K + D
Sbjct: 1101 SMSPTIHNTAHEILGFPHKYELLETETVGEEIKAAVTLPEFGGASVTIPYKLDVIPLLDT 1160
Query: 325 VDTVAKSIGAVNCIIR-RQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSG-GVSSALA 380
+ A+++GAVN I+ ++ DG L G NTD+VG + + + L V+G + +AL
Sbjct: 1161 LSPHAEAVGAVNTIVPIKREDGSTVLHGENTDWVG----MRECIVSHLPVTGRSIEAAL- 1215
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLADLENFNP 439
VIGAGG +A Y K+ + + + NRT A LA T + + + P
Sbjct: 1216 -----VIGAGGTSRAAIYALKSLSVKNIYLFNRTRASAEALALTFSDTNVKIVEKLGVWP 1270
Query: 440 EDG--------MILANTTSIGMQPKVDETPIPKHALGH--YALVFDAVYTPKITRLLREA 489
E + A+ T++ + + +P L +V D Y P +T LL A
Sbjct: 1271 EGASPPSVVISTVPASATTLDLS-ATNALYLPSSVLDKSVQGVVVDMAYRPAVTPLLELA 1329
Query: 490 EESGA-TIVSGLEMFIGQAYEQYERFTG 516
++ + IV GL++ + Q + Q++ +TG
Sbjct: 1330 SKADSWKIVRGLDVLLEQGFAQFKLWTG 1357
>gi|337748424|ref|YP_004642586.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
gi|336299613|gb|AEI42716.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
Length = 299
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 27/289 (9%)
Query: 247 RQMGPD--TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSS 302
R+ G D T ++G+ G PV HSKSP++ N AF G N + H+L + +
Sbjct: 8 RKQGLDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRA 67
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
F G + T+PHK + DE+D A+ IGAVN ++ G+L GYNTD +G I +++
Sbjct: 68 LGFRGVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVV--NEGGRLIGYNTDGIGYIRSLK 125
Query: 363 DG----LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
+ L+GR K+ ++ G A A+ + IANRT ++A
Sbjct: 126 EETGIELKGR-------------KVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKAL 172
Query: 419 ELAETVGGH-ALSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
+LA+ +GG+ ++S L+ + D ++ N T +GM P VDE P+ + +V D
Sbjct: 173 DLADALGGYGSISGHGLDEIHELVGDAALIVNNTLVGMYPNVDEVPMDISLIREDQVVSD 232
Query: 476 AVYTPKITRLLREAEE-SGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+Y P TRLLREA E GAT+ SGL MFI Q +E +TG P + A
Sbjct: 233 LIYNPLETRLLREAREMRGATVHSGLGMFIYQGAYAFEYWTGQPAPVEA 281
>gi|386726061|ref|YP_006192387.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
gi|384093186|gb|AFH64622.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
Length = 302
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 27/289 (9%)
Query: 247 RQMGPD--TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSS 302
R+ G D T ++G+ G PV HSKSP++ N AF G N + H+L + +
Sbjct: 8 RKQGLDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRA 67
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
F G + T+PHK + DE+D A+ IGAVN ++ G+L GYNTD +G I +++
Sbjct: 68 LGFRGVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVV--NEGGRLIGYNTDGIGYIRSLK 125
Query: 363 DG----LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
+ L+GR K+ ++ G A A+ + IANRT ++A
Sbjct: 126 EETGIELKGR-------------KVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKAL 172
Query: 419 ELAETVGGH-ALSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
+LA+ +GG+ ++S L+ + D ++ N T +GM P VDE P+ + +V D
Sbjct: 173 DLADALGGYGSISGHGLDEIHELVGDAALIVNNTLVGMYPNVDEVPMDISLIREDHVVSD 232
Query: 476 AVYTPKITRLLREA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+Y P TRLLREA E+ GAT+ SGL MFI Q +E +TG P + A
Sbjct: 233 LIYNPLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEA 281
>gi|379723334|ref|YP_005315465.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
gi|378572006|gb|AFC32316.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
Length = 302
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 27/289 (9%)
Query: 247 RQMGPD--TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSS 302
R+ G D T ++G+ G PV HSKSP++ N AF G N + H+L + +
Sbjct: 8 RKQGLDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRA 67
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
F G + T+PHK + DE+D A+ IGAVN ++ G+L GYNTD +G I +++
Sbjct: 68 LGFRGVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVV--NEGGRLIGYNTDGIGYIRSLK 125
Query: 363 DG----LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
+ L+GR K+ ++ G A A+ + IANRT ++A
Sbjct: 126 EETGIELKGR-------------KVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKAL 172
Query: 419 ELAETVGGH-ALSLADLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
+LA+ +GG+ ++S L+ + D ++ N T +GM P VDE P+ + +V D
Sbjct: 173 DLADALGGYGSISGHGLDEIHELAGDAALIVNNTLVGMYPNVDEVPMDISLIREDHVVSD 232
Query: 476 AVYTPKITRLLREA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+Y P TRLLREA E+ GAT+ SGL MFI Q +E +TG P + A
Sbjct: 233 LIYNPLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEA 281
>gi|429853054|gb|ELA28153.1| pentafunctional arom polypeptide [Colletotrichum gloeosporioides Nara
gc5]
Length = 1556
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 237/500 (47%), Gaps = 49/500 (9%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R D L++++P + L + VP +FT R + +GG++ D ++ +++
Sbjct: 1055 GSDAVELRADLLQDYSPEFVARQVALLRSVADVPIIFTLRTMAQGGKFPDEAFDQGLELY 1114
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
+ A +G ++IDVE+ + + ++ +K + ++I S H+ T S ++ S +A
Sbjct: 1115 QKASRMGVEFIDVEMTLPEKVIQAVVERK-GRSRIIASHHDPHGTLSWKNGSWTPFYNKA 1173
Query: 165 -SGADIVKFATTAL---DITDVARV-FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D++K TA D D+AR ++ + PII L MG G +SR+L G
Sbjct: 1174 LQWGDVIKLVGTAQSLEDNYDLARFKSEMLASHRTPIIALNMGSAGKLSRVLN---GCLT 1230
Query: 220 TFGTLENGIVSAPGQPT---IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAF 276
+ +APGQ + I+ L L G D K F + GKP+ S+SP L+N F
Sbjct: 1231 PVSHPDLPFKAAPGQLSAAEIRKALSLLG----GIDPKSFYLFGKPISASRSPALHNSLF 1286
Query: 277 KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
VG + D A + DF G S TIP K + DEV A+ IGAVN
Sbjct: 1287 DLVGLPHKYWRKETDVAADLRDIIRAPDFGGASVTIPLKLDIMNEIDEVSEAARVIGAVN 1346
Query: 337 CII----RRQSDGKLFGYNTDYVGAISAIE-DGLRGRLNVSGGVSSALAGKLFVVIGAGG 391
II Q KL G NTD++G + A++ +G R S GV A +VIG+GG
Sbjct: 1347 TIIPVSGSGQDGAKLVGDNTDWLGMVYALQSEGTTAR--SSSGVQHAA-----MVIGSGG 1399
Query: 392 AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM-ILANTTS 450
+A + + G + A R ET+ +E D + +LA++ +
Sbjct: 1400 TTRAAIFALHSLGFGPIYA---LARNTNGLETLKASFPPEFRIEALKSADQVPMLASSPT 1456
Query: 451 I---------GMQPKVDET--PIPKHA-LGHYALV-FDAVYTPKITRLLREAEESGATIV 497
+ + P + ET + +H +G V + Y P+ T L++ AE++G T +
Sbjct: 1457 VVVSTIPADKPVDPSLRETLMAVLRHENVGDVTRVLLEMAYQPRHTPLMQLAEDAGWTTI 1516
Query: 498 SGLEMFIGQAYEQYERFTGL 517
GLE+ Q + Q++R+T +
Sbjct: 1517 PGLEVLAAQGWYQFQRWTDI 1536
>gi|167043755|gb|ABZ08447.1| putative Shikimate / quinate 5-dehydrogenase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 273
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 157/280 (56%), Gaps = 26/280 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
+ + +IG P+ HS SP ++N AF+ + + ++ + +++ + + AGF+
Sbjct: 2 SNTYAVIGDPIDHSLSPNIHNAAFRHLKLDHTYIAYKIPAGELSAGIEALKAIKIAGFNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+DT K IGAVN ++ DGKL GYNTD +G + I+ + N
Sbjct: 62 TIPHKIEMMKFLDEMDTTCKIIGAVNTVLNE--DGKLKGYNTDMIGFLDPIK-----KKN 114
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAE---TVGG 426
++ S L ++GAGGA +A+ K K +++ I NRT + A +LAE +GG
Sbjct: 115 LTIKDSQVL------LLGAGGAARAIVTAMVKEKASKITIVNRTMENANKLAEFAKKIGG 168
Query: 427 HALSLADLE-NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+A +++ E N D + N+TSIGM+ + +PI + ++V+D VY P T L
Sbjct: 169 NADTVSIQEANKLIADYKFIINSTSIGMRN--EPSPISTENISKDSIVYDIVYQPINTDL 226
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
+++++E+GATI+ G EM + QA +E + KM AP+
Sbjct: 227 IKKSKENGATIIYGYEMLLSQAACSFEIW----HKMEAPY 262
>gi|302035827|ref|YP_003796149.1| shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
gi|300603891|emb|CBK40223.1| Shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
Length = 284
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 13/271 (4%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS-NDFAGFSCT 311
T+ GIIG PV HS SP ++N AF+ +G + V++ V+ + + + + GFS T
Sbjct: 7 TQWCGIIGNPVEHSLSPAIHNAAFQRMGLDLVYLAFRVEALGDALKGVRALGNARGFSVT 66
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRG- 367
IPHK AA+ DEV+ AK IGA+N I+ +GKL GYNTD GA+ A+++G L G
Sbjct: 67 IPHKVAAIPFLDEVEPTAKHIGAINTIV--VEEGKLKGYNTDASGALRALKEGGALLDGH 124
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
R+ + G +A A + G G AG L +G R + D+A E
Sbjct: 125 RVLILGSGGAARAIAFALATGTGIAG--LTILGIEEGERQKLVKDLRDKANIPIED---G 179
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L+L L N+ P L + T +GM P++DE+ +P + V D VY P+ T+LL+
Sbjct: 180 PLTLDMLRNWVPHV-RTLIHCTPVGMSPRIDESCVPTNLFRPELTVMDIVYNPRETKLLQ 238
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
EA+ +G +SGLEMF+ QA Q+E +T P
Sbjct: 239 EAKAAGCRTISGLEMFLNQAVLQFELWTKQP 269
>gi|85077284|ref|XP_956000.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
gi|74622647|sp|Q8X071.1|ARO1_NEUCR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|18376380|emb|CAD21207.1| probable PENTAFUNCTIONAL AROM POLYPEPTIDE [Neurospora crassa]
gi|28917040|gb|EAA26764.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
Length = 1563
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 254/535 (47%), Gaps = 62/535 (11%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKE 75
++K P V + +V K +D+ G+D VE+R+D L++++P + + L
Sbjct: 1041 VKKKPHSFFVSLTVPNVSK-ALDIIPKVVVGSDAVELRVDLLEDYDPEFVAKQVALLRSA 1099
Query: 76 SPVPTLFTYRPIWEGGQYDGDENE-RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
+ +P ++T R + +GG++ D+ E + + R ++ G +Y+D+E+ + E +++ +K
Sbjct: 1100 ARIPIVYTVRTVSQGGKFPDDDYELALKLYRTGLQAGVEYLDLEMTMPDEVIEAVTNEK- 1158
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQA-SGADIVKFATTALDITD---VARV-FQIT 189
+I S H+ + T S ++ + +A D+VK A ++ D +AR +
Sbjct: 1159 GYTHIIASHHDPKATLSWKNGGWIQYYNKALQHGDVVKLVGVARELADNFALARFKASLA 1218
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLT---FGTLENGIVSAPGQPTIKDLLD-LYN 245
P+I L MG G +SR+L GFLT L + +APGQ + ++ L
Sbjct: 1219 AAHDKPLIALNMGAAGKLSRVL----NGFLTPVSHPALPSK--AAPGQLSAAEIRQALAL 1272
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF 305
++ P + F + G P+ S+SP L+N F+ G + D+ A + F
Sbjct: 1273 IGELEP--RSFHLFGNPISASRSPALHNALFRDNGLPHQYSLFETDNAADVKDLIRAPGF 1330
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIED 363
G S TIP K + DEV AK IGAVN II ++ K L G NTD++G + A
Sbjct: 1331 GGASVTIPLKLDIMPLLDEVSDAAKVIGAVNTIIPVRNGDKVTLRGDNTDWMGMVYA--- 1387
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
LR V S AG +V+GAGG +A + G A + + R DR + LAE
Sbjct: 1388 -LRNAGVVKCTKESPTAG---MVVGAGGTTRAAVHALHDLGFAPIYVVARNADRVKALAE 1443
Query: 423 TVGGHALSLADLENFN-PEDGMILANTTSIGMQPKVDETPIPKH-------------ALG 468
+ D+ + + PE+ + A +T+ QP V + IP +L
Sbjct: 1444 SFPAE----YDIRSLSTPEE--VAAESTA---QPSVVISTIPADKPIDQSMREVIVASLR 1494
Query: 469 HYA------LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
H + ++ + YTP+ T L++ AE++ + GLE+ Q + Q++ +TG+
Sbjct: 1495 HPSVADGKHVLLEMAYTPRHTPLMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTGI 1549
>gi|383762257|ref|YP_005441239.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381382525|dbj|BAL99341.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 464
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 150/284 (52%), Gaps = 27/284 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-----IAKFFQTYSSNDFAG 307
T + G+IG PV HS SP ++N AF ++G + +V L V+ + + + G
Sbjct: 13 TTLVGLIGWPVSHSVSPAMHNAAFAALGMDWRYVPLPVNPALPGAVGDAVRGMRAMGMRG 72
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+PHK+A + D + A+++ AVN +I ++DG L G NTD G I+ +
Sbjct: 73 INVTVPHKQAVLPFLDHIAPAAQAMRAVNTVIV-EADGSLTGDNTDAPGFIADLR----- 126
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG 426
S GV A G+ +V+GAGG+ +A+ YG A+A R+ +ANR +RA +L E +
Sbjct: 127 ----SHGVDPA--GEHALVLGAGGSARAVVYGLAQAGVQRITVANRRIERAHQLLEDLRP 180
Query: 427 H-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH-ALGHYALVFDAVY 478
+ A++L D D ++ N TS+GM P V+ TP P+ L V+D VY
Sbjct: 181 YLGAIPCAAVALPD-GLVEVADAPLIVNCTSLGMTPHVETTPWPRELPLRPGQTVYDLVY 239
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
P T LL++A + GA + GL M I Q +ER+TG P +
Sbjct: 240 NPPDTLLLQQARQQGARAIGGLGMLIWQGALAFERWTGRPAPVE 283
>gi|441472052|emb|CCQ21807.1| Shikimate dehydrogenase [Listeria monocytogenes]
gi|441475188|emb|CCQ24942.1| Shikimate dehydrogenase [Listeria monocytogenes N53-1]
Length = 283
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 142/278 (51%), Gaps = 31/278 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T++ G+IG PV HSKSPI+YN +F+ G + ++ I K +T+ + G + T+
Sbjct: 9 TRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTI-KAIKTF---NLRGANVTM 64
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 65 PCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-------- 114
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG-- 426
S +AGK +IGAGGA A+ GA+ + I + YD+A++ A ++
Sbjct: 115 ---SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAASIKQEV 171
Query: 427 -----HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVY 478
H L D E N E IL N T +GM P ETPI ++ L+ D +Y
Sbjct: 172 PNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIY 231
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 232 NPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 269
>gi|89898096|ref|YP_515206.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila felis Fe/C-56]
gi|89331468|dbj|BAE81061.1| shikimate biosynthesis protein subunit [Chlamydophila felis
Fe/C-56]
Length = 477
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 216/467 (46%), Gaps = 48/467 (10%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIK--ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
D +E+R+D L + + + +K LI + P+ TL + + E + + LA
Sbjct: 26 DSIELRVDCLLSLSSNQ-LKHLISLAKKPILTLKKHASLSEIAWIER-------TMELA- 76
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN--YQYTPSVEDLSNLVARIQASG 166
+L +Y+D++ +E SI+ + P K+I+S H+ +Y P NL +
Sbjct: 77 KLQPEYLDIDKDFPKEALTSIQKQYP-NIKIILSYHSETSEYAP------NLHEEMLKRQ 129
Query: 167 ADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN 226
A K A T+ D R QI + L MG G+ SRIL + + N
Sbjct: 130 AHHYKIAITSTRSIDTLRCIQIKKNLPENTTLLCMGNAGIASRILSPLMKNAINYAAGIN 189
Query: 227 GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV 286
APGQ +I DLL YN+ + ++ ++G+IG PV S S + +N+ F + + ++
Sbjct: 190 APNVAPGQLSIADLLA-YNYTNLSAESSIYGLIGNPVNRSISHLSHNKLFSELQIHASYI 248
Query: 287 HLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD 344
+L+D ++ FF F G S T+P K + D +D A+ + N ++ ++
Sbjct: 249 KILLDSHELKDFFSLTRDLPFQGLSVTMPFKTKVLDYIDILDHSAQHCQSCNTLVF--NN 306
Query: 345 GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG 404
K+ GYNTD +G L R ++S L + ++G+GGA KA+A +
Sbjct: 307 HKITGYNTDGLGLF-----NLLKRKHIS------LQNQHIAIVGSGGAAKAIATTLAREE 355
Query: 405 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK 464
R+ I NRT A +LA G A L+ L + D ++L + P V+ IP+
Sbjct: 356 TRISIFNRTQAHAEKLARLCNGQAFPLSSLSENHNIDMLVLC------LPPHVE---IPE 406
Query: 465 HALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
++ D PK + +++A+ G+ ++ G EMF QA Q+
Sbjct: 407 ---IFPPVIIDINALPKESLYIQKAKNHGSRVLYGYEMFAEQALLQF 450
>gi|374603053|ref|ZP_09676038.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
gi|374391366|gb|EHQ62703.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
Length = 297
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 138/270 (51%), Gaps = 17/270 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T VF +IG P+ HSKSP+++N A + +G N V+ H+ + + + Q + G +
Sbjct: 20 TAVFAVIGDPIKHSKSPLMHNAALRELGLNAVYTAFHVAPEQLEQAIQGMRALGIGGMNV 79
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKEA + DEVD A IGAVN I+ R +G+L GYNTD +G + ++++ +
Sbjct: 80 TIPHKEAVMAYLDEVDESASVIGAVNTIVNR--NGRLIGYNTDGLGFVRSLQEEM----- 132
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---- 426
+S ++ ++ G A KA R+ IANRT RA LA +
Sbjct: 133 ----ISDLRESRILLIGAGGAARGIAYALLKAGCRRLHIANRTLGRAEALAHDLSAFGTV 188
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A+ L + + + I+ +TTS+GM P VD P L +V D VY P T LL
Sbjct: 189 SAVQLGERPAIDAHEVDIVIHTTSVGMHPDVDAVPFDPDWLLPDMIVSDIVYNPLETALL 248
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
REA + G SGL MF+ Q E +TG
Sbjct: 249 REASKRGCRPHSGLGMFVYQGAIALELWTG 278
>gi|170096704|ref|XP_001879572.1| predicted protein [Laccaria bicolor S238N-H82]
gi|327507659|sp|B0D6H2.1|ARO1_LACBS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|164645940|gb|EDR10187.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1606
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 236/511 (46%), Gaps = 66/511 (12%)
Query: 49 GADLVEIRLDGL---KNFNPRE-----------NIKTLIKESPVPTLFTYRPIWEGGQY- 93
G D +E+R+D L K+++ E + L + + +P +FT R +GG +
Sbjct: 1089 GVDAIELRVDLLRASKDYDSIEYSIPTLAYVSSQVAALRRVTSLPIVFTVRTQSQGGSFP 1148
Query: 94 DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT---- 149
D E E V++L+LA+ LG +Y+DVE+ ++ + + K +I S H++
Sbjct: 1149 DAAEKEAVELLKLALRLGVEYVDVEISLSEKKIKELVSLK-GSSHMIASWHDWSGNMIWD 1207
Query: 150 -PSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQV---PIIGLVMGE 203
P V++ + AR DI+K A I D ++ V+S P I + MG
Sbjct: 1208 GPVVKEKYDAAARF----GDIIKIVGKANSIQDNFTLYNFVSKVNSTAGSKPFIAINMGL 1263
Query: 204 RGLISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
G +SR+L + T + + ++ +APGQ + K + + + + P + F + G
Sbjct: 1264 EGQMSRVLNS------TLSPVSHPLLPSKAAPGQLSFKQIQNALHLLGLLPAQR-FYLFG 1316
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ-TYSSNDFAGFSCTIPHKEAAV 319
P+ HS SP L+N F+ +G + L ++A+ + + F G S TIP+K +
Sbjct: 1317 TPIAHSMSPTLHNTGFEILGLPHHYELLETKEVAEEIKIAIGDSAFGGASVTIPYKLDVI 1376
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQ--SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
D++ A++IGAVN II R S L G NTD++G + I + L S + +
Sbjct: 1377 PLLDKLSPAAEAIGAVNTIIPRTTGSGRMLVGDNTDWLGIKACITEQLS-----SKPIHA 1431
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLEN 436
AL VIGAGG +A Y A + + NRT +A ELA + + +
Sbjct: 1432 AL------VIGAGGTARAAIYALSALNVGDIYLYNRTTSKAYELAHAFPHAPVHVLEQLG 1485
Query: 437 FNPEDGM---ILANTTSIGMQPKVDETP---IPKHALGHY---ALVFDAVYTPKITRLLR 487
P + ++ +T +ET +P + A+V D Y P T LLR
Sbjct: 1486 QWPNGAVPPCVIVSTVPASATTTEEETSGILLPSKLFDYRDGPAVVIDMAYKPAETPLLR 1545
Query: 488 EAEESG--ATIVSGLEMFIGQAYEQYERFTG 516
A+ +G V GLE+ + Q Y Q+E +TG
Sbjct: 1546 LAKTAGDNWATVPGLEVLLEQGYVQFEMWTG 1576
>gi|284802683|ref|YP_003414548.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284995825|ref|YP_003417593.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404414320|ref|YP_006699907.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|284058245|gb|ADB69186.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284061292|gb|ADB72231.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404240019|emb|CBY61420.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC7179]
Length = 289
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 142/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSPI+YN +F+ G + ++ + +A + + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S +AGK +IGAGGA A+ GA+ + I + YD+A++ A ++
Sbjct: 121 -----SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAASIKQ 175
Query: 427 -------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
H L D E N E IL N T +GM P ETPI ++ L+ D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|327507677|sp|C7GIN5.1|ARO1_YEAS2 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|256274428|gb|EEU09331.1| Aro1p [Saccharomyces cerevisiae JAY291]
Length = 1588
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 240/500 (48%), Gaps = 43/500 (8%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV-DV 103
G + VE+R+D L N++ + + L K + +P +FT R +GG + +E + + ++
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTKKQGGNFPDEEFKTLREL 1158
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLSNLVAR 161
+A++ G +++D+EL + + + K+ K+I S H++Q Y+ + N +
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDIQYEVINKR-GNTKIIGSHHDFQGLYSWDDAEWENRFNQ 1217
Query: 162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D+VKF TA++ D R+ F+ T H P+I + M +G ISR+L +
Sbjct: 1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275
Query: 220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
T L N +APGQ T+ + +Y G + K ++GKP+GHS+SPIL+N ++ +
Sbjct: 1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332
Query: 280 GFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F + + K + +F G + TIP K ++ DE+ AK IGAVN
Sbjct: 1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + K G NTD++G +A+ ++ GV + +VIGAGG +A
Sbjct: 1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y + G ++ I NRT + + L E++ S +E G+ ++ +
Sbjct: 1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAVSCVPA- 1501
Query: 452 GMQPKVDETP------IPKHALGHYA-LVFDAVYTPKITRLLREAEES-GATIVSGLEMF 503
+P DE + K A +A + +A Y P +T ++ +++ +V G +M
Sbjct: 1502 -DKPLDDELLSKLERFLVKGAHAAFAPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQML 1560
Query: 504 IGQAYEQYERFTGLPGKMNA 523
+ Q Q+E++TG A
Sbjct: 1561 VHQGVAQFEKWTGFKAPFKA 1580
>gi|19115593|ref|NP_594681.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|15213935|sp|Q9P7R0.1|ARO1_SCHPO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|7019762|emb|CAB75770.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe]
Length = 1573
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 234/508 (46%), Gaps = 51/508 (10%)
Query: 49 GADLVEIRLDGLKNFNPR------------ENIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
G D +E+R+D LK+ P+ E I L + +P +FT R I +GG + D
Sbjct: 1077 GCDAIEVRVDYLKD--PKSSNGISSLDFVAEQISLLRCSTTLPIIFTIRTISQGGLFPND 1134
Query: 97 ENERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
+ E L L AM G D++DVEL + E + + K K+I+S H+ T S
Sbjct: 1135 KEEEAKELMLSAMRYGCDFVDVELGWSSETINILYQHK-GYTKLIMSWHDLSGTWSWARP 1193
Query: 156 SNLVARIQ--ASGADIVKFATTALDITDVARV----FQITVHSQVPIIGLVMGERGLISR 209
+ +++ +S AD++K A ++ D + +IT +P+I MG G +SR
Sbjct: 1194 HEWMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMDIPLILFNMGRFGQLSR 1253
Query: 210 ILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF-RQMGPDTKVFGIIGKPVGHSKS 268
IL KF +T L + +APGQ T+K L + ++ P+ F + GKP+ HS+S
Sbjct: 1254 IL-NKFMTPVTHPLLPSK--AAPGQLTVKQLNEARVLIGEILPEK--FFLFGKPIKHSRS 1308
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
PIL++ A++ +G + D + + + + DF G + TIP+K + +K DE+
Sbjct: 1309 PILHSTAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVMKFMDELSDE 1368
Query: 329 AKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRG-RLNVSGGVSSALAGKLFV 385
A+ GAVN II + KL G NTD+ G + L G L + G +
Sbjct: 1369 ARFFGAVNTIIPIRIGDKLVLRGDNTDWRGIYDTFANALDGVSLRDTNG----------L 1418
Query: 386 VIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGM 443
VIGAGG +A Y G +R+ + NRT + + + + + + D +N E+
Sbjct: 1419 VIGAGGTSRAAIYSLHRLGVSRIYLLNRTLANSYRVQDVFPPDYNIHIIDSDNIPSEELS 1478
Query: 444 ILANTTSIGMQPKVDETP-----IPKHALGHYA---LVFDAVYTPKITRLLREAEESGAT 495
+ + + P E P + K L + A + D Y P T L+ A +
Sbjct: 1479 SVTLSAVVSTIPADIELPEKVASVIKALLANKADGGVFLDMAYKPLHTPLMAVASDLEWK 1538
Query: 496 IVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+GLE + Q + +TG+ +A
Sbjct: 1539 CCNGLEALVRQGLASFHLWTGMTAPFDA 1566
>gi|328767672|gb|EGF77721.1| hypothetical protein BATDEDRAFT_13796 [Batrachochytrium dendrobatidis
JAM81]
Length = 1591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 241/514 (46%), Gaps = 63/514 (12%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN-ERVDVL 104
GA+ +E+R+D L++ P + L S +P ++T R +GG++ D+ + + +L
Sbjct: 1092 GANAIELRVDLLESTKPDFVGSQVAMLRHLSKLPIVYTVRTQSQGGRFPDDKTRDMISLL 1151
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNL-VARIQ 163
L + LG +YIDVE E SI K +I S H+ + D+ L + +
Sbjct: 1152 ELGIRLGCEYIDVEFTAPFERFSSITKSKGNSL-IIGSYHDCRGVALWTDVCMLDIYQDL 1210
Query: 164 ASGADIVKFATTALDITDVARVFQITVHSQV---------PIIGLVMGERGLISRILCAK 214
+ +D +K A +I D V T +Q P+I L MG G +SR+L
Sbjct: 1211 YAHSDCIKLIGVAHNIADSIAVS--TFRNQFVPKLGLAPKPLIALAMGPLGQLSRVL--- 1265
Query: 215 FGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYN 273
+LT T + +++APGQ TI + + + M P K + + GKP+ S SP+L+N
Sbjct: 1266 -NTYLTPVTHASMPMLAAPGQLTISQIHSIRHLIGMLPK-KEYYLFGKPISESMSPVLHN 1323
Query: 274 EAFKSVGFNGVFVHLLVDDIAKFFQTYSSND----FAGFSCTIPHKEAAVKC--CDEVDT 327
FK +G + L D I + + F G S TIP K ++ + +
Sbjct: 1324 TGFKQLGLPHHYSLLETDSIDRVREVVQQGKLDGTFGGASVTIPLKIDVIQSGIATRICS 1383
Query: 328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 387
AK IGAVN + Q+DG++ G+NTD++G I+ ++ L VS S + G +V+
Sbjct: 1384 AAKQIGAVN-TLHMQADGEIVGHNTDWIG----IKQCIQRHLGVS--CSRKVVG---IVL 1433
Query: 388 GAGGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGHALSLADLENFNP-----E 440
GAGG +A Y +V + NRT +A ++A+ +++ +L++ P E
Sbjct: 1434 GAGGTARAACYALSQISYIQQVRVWNRTVHKAADMAKEF--KYVAVEELKDLVPIAEPME 1491
Query: 441 DGMIL---ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA--- 494
D L T Q +D + K +G +V + Y P+ T+L+ A+ +
Sbjct: 1492 DEQPLYAIVGTIPSTAQDALDLDSLFKDGVG--GVVVEMAYRPRQTKLIMAAQHANQKHS 1549
Query: 495 ---TIVSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
V G+++ I Q YEQ++ +TG + PH
Sbjct: 1550 STFACVEGIDVLIEQGYEQFQLWTGC----HPPH 1579
>gi|238598730|ref|XP_002394684.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
gi|215464118|gb|EEB95614.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
Length = 518
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 236/512 (46%), Gaps = 67/512 (13%)
Query: 49 GADLVEIRLDGLKNFNPRE----------------NIKTLIKESPVPTLFTYRPIWEGGQ 92
G D +E+R+D L++ PR+ + L + SP+P ++T R +GG
Sbjct: 7 GVDALELRVDLLRS--PRDVEIAGHHIPDRSYVADQVAALRRVSPLPIVYTVRTASQGGA 64
Query: 93 Y-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPS 151
+ D ++ ++L LA+ LG +YIDVE+ + E ++ +K ++I S H++
Sbjct: 65 FPDNAPDKAFELLELALILGVEYIDVEISLPEEKIKTLISRK-GASQIIASWHDWS---- 119
Query: 152 VEDLSNLVARIQA------SGADIVKFATTALDITDVARV--FQITVHSQV---PIIGLV 200
++ A +QA S DIVK A ++ D + F V+ + P + +
Sbjct: 120 -GNMKWDGAEVQAKYDLADSLGDIVKIVGKANNLQDNPELQHFVTKVNRRTNAKPFLAIN 178
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MG G +SRIL +T L N +APGQ + ++ + P K F + G
Sbjct: 179 MGTEGQMSRILNTTTTP-VTHPLLPNR--AAPGQLSFAEIQQALHLLGQKPHKK-FYLFG 234
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ-TYSSNDFAGFSCTIPHKEAAV 319
P+ HS SP L+N F+ +G + D I K + ++ +F G S TIP K +
Sbjct: 235 NPISHSLSPTLHNTGFQLLGLPYDYSLFQTDGIGKEIRDIIAAPNFGGASVTIPFKLDII 294
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQ-SDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
DE+ AKS+GAVN I+ + +DG L+G NTD++G I+ + R+ G +
Sbjct: 295 SVLDELSPAAKSMGAVNTIVAKSAADGSRILYGDNTDWLG----IKGSISARI-APGSIH 349
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRA----RELAETVGGHALSL 431
+AL +IG+GG +A Y GA+ + + NRT ++A +E E L
Sbjct: 350 AAL------IIGSGGTARAAIYALHDLGAKCIYLYNRTREKAVALQKEFTEANIQVLDKL 403
Query: 432 ADLENFNPEDGMILAN--TTSIGMQPKVDETPIPKHALGHY---ALVFDAVYTPKITRLL 486
P +I++ T ++P+ + +P + +V D Y P T LL
Sbjct: 404 GQWSESTPPANIIISTVPATDTSIEPQPNSLYLPASLFAYRDGPGVVIDMAYKPVETPLL 463
Query: 487 REA--EESGATIVSGLEMFIGQAYEQYERFTG 516
+ A + G+E+ + Q Y Q+E +TG
Sbjct: 464 KLAITTANNWATAQGVEVLLQQGYYQFEAWTG 495
>gi|302663763|ref|XP_003023519.1| repressor protein [Trichophyton verrucosum HKI 0517]
gi|291187522|gb|EFE42901.1| repressor protein [Trichophyton verrucosum HKI 0517]
Length = 1600
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 245/551 (44%), Gaps = 89/551 (16%)
Query: 44 KANASGADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY 93
+A + G+ VE+R+D LK+ + E I L + +P +FT R +GG +
Sbjct: 1069 QAASFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQGGLF 1128
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYT 149
D +E + + +LA+ +G++++D+E+ F D++ E K+I S H+
Sbjct: 1129 PDNAVDEALGLYKLAIRMGSEFVDLEIS----FPDNLLHAVTEIKGFSKIIASHHDVNGQ 1184
Query: 150 PSVEDLSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGER 204
S + S + +A D++K A + D + Q ++ +PII + MG +
Sbjct: 1185 LSWSNGSWIQYYNKALQYGDVIKLIGVAKSLDDNLTLQQFKAWAERSYPIPIIAINMGNK 1244
Query: 205 GLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKP 262
G +SRIL GF+T +APGQ + K++ MG D K F + GKP
Sbjct: 1245 GRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTL--MGELDAKEFALFGKP 1298
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
+ S+SP L+N F GF + L D++ + S +F G S TIP KE ++
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
DE+ AK IGAVN I+ +G KL GYNTD+ G ++D G + + G S+
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--GAIYLKNGESA- 1415
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF 437
+ IG+GG +A Y + G + + + RT +LA + +
Sbjct: 1416 ------LTIGSGGTARAAVYSLHSMGYSPIYLVGRTPANLTKLASSFPAE---------Y 1460
Query: 438 NPEDGMILANTTSIGMQPKVDETPIP-----------------KHAL--GHYALVFDAVY 478
N + ++ + S+ PKV + IP K A ++ D Y
Sbjct: 1461 NVQ---VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELITFIMKKAQEGSEECIILDMAY 1517
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQ--------AYEQYERFTGL-----PGKMNAPH 525
P +T + + A +G IV GLE+ + Q + E +E +TGL ++
Sbjct: 1518 KPDVTAIAQLASPAGWKIVKGLEVLVAQGVYQVCYNSLEYFEHWTGLVPVYEDARVRLFP 1577
Query: 526 LYKFFVLLLYS 536
Y F+L Y+
Sbjct: 1578 WYPLFLLTQYA 1588
>gi|46908470|ref|YP_014859.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224844|ref|YP_002758951.1| oxidoreductase [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254825200|ref|ZP_05230201.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853359|ref|ZP_05242707.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254931651|ref|ZP_05265010.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|255520409|ref|ZP_05387646.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|300763954|ref|ZP_07073950.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386732984|ref|YP_006206480.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404281856|ref|YP_006682754.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404287669|ref|YP_006694255.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750634|ref|YP_006674100.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405753508|ref|YP_006676973.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405756414|ref|YP_006679878.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|406705030|ref|YP_006755384.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424715118|ref|YP_007015833.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824044|ref|ZP_18249057.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|46881741|gb|AAT05036.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. F2365]
gi|225877306|emb|CAS06020.1| Putative oxidoreductase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606724|gb|EEW19332.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|293583206|gb|EFF95238.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293594445|gb|EFG02206.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300515295|gb|EFK42346.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|332312724|gb|EGJ25819.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|384391742|gb|AFH80812.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404219834|emb|CBY71198.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes ATCC
19117]
gi|404222708|emb|CBY74071.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2378]
gi|404225614|emb|CBY76976.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2540]
gi|404228491|emb|CBY49896.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2755]
gi|404246598|emb|CBY04823.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406362060|emb|CBY68333.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424014302|emb|CCO64842.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 289
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 142/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HSKSPI+YN +F+ G + ++ ++ +A + + + G +
Sbjct: 9 TRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S + GK +IGAGGA A+ GA+ + I + YD+A++ A ++
Sbjct: 121 -----SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAASIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
H L D E N E IL N T +GM P ETPI ++ L+ D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISDTSVFRKELIVADI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|336468271|gb|EGO56434.1| hypothetical protein NEUTE1DRAFT_147102 [Neurospora tetrasperma FGSC
2508]
Length = 1596
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 252/535 (47%), Gaps = 62/535 (11%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKE 75
++K P V + +V K +D+ G+D VE+R+D L++++P + + L
Sbjct: 1074 VKKKPHSFFVSLTVPNVSK-ALDIIPKVVVGSDAVELRVDLLEDYDPEFVAKQVALLRSA 1132
Query: 76 SPVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
+ +P ++T R + +GG++ D D + + R ++ G +Y+D+E+ + E +++ K
Sbjct: 1133 ARIPIVYTVRTVSQGGKFPDADYELALKLYRTGLQAGVEYLDLEMTMPDEVIEAVTNAK- 1191
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQA-SGADIVKFATTALDITD---VARV-FQIT 189
+I S H+ + T S ++ + +A D+VK A ++ D +AR +
Sbjct: 1192 GYTHIIASHHDPKATLSWKNGGWVQYYNKALQHGDVVKLVGVARELADNFALARFKASLA 1251
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLT---FGTLENGIVSAPGQPTIKDLLD-LYN 245
P+I L MG G +SR+L GFLT L + +APGQ + ++ L
Sbjct: 1252 AAHDKPLIALNMGAAGKLSRVL----NGFLTPVSHPALPSK--AAPGQLSAAEIRQALAL 1305
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF 305
++ P + F + G P+ S+SP L+N F+ G + D+ A + F
Sbjct: 1306 IGELEP--RSFHLFGNPISASRSPALHNALFRDNGLPHQYSLFETDNAADVKDLIQAPGF 1363
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIED 363
G S TIP K + DEV AK IGAVN II ++ K L G NTD++G + A
Sbjct: 1364 GGASVTIPLKLDIMPLLDEVSDAAKVIGAVNTIIPVRNGDKVTLRGDNTDWMGMVYA--- 1420
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
LR V S AG +V+GAGG +A + G A + + R DR + LAE
Sbjct: 1421 -LRNAGVVKCSKESPTAG---MVVGAGGTTRAAVHALHDLGFAPIYVVARNADRVKALAE 1476
Query: 423 TVGGHALSLADLENFN-PEDGMILANTTSIGMQPKVDETPIPKH-------------ALG 468
+ D+ + + PE+ + A +T+ QP V + IP +L
Sbjct: 1477 SFPAE----YDIRSLSTPEE--VAAESTA---QPSVVISTIPADKPIDQSMREVIVASLR 1527
Query: 469 HYA------LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
H + ++ + YTP+ T L++ AE++ + GLE+ Q + Q++ +TG+
Sbjct: 1528 HPSVADGKHVLLEMAYTPRHTPLMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTGI 1582
>gi|342887283|gb|EGU86824.1| hypothetical protein FOXB_02651 [Fusarium oxysporum Fo5176]
Length = 1569
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 245/509 (48%), Gaps = 65/509 (12%)
Query: 49 GADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++ + I TL + P +FT R +GG++ D E + +
Sbjct: 1072 GSDAVELRVDLLQDRSIDSVTRQISTLRASAKKPIVFTLRTESQGGKFPDSAYEEGLQLY 1131
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
RLA+++G +Y+DVE+ + + SI + ++I S H+ + T S ++ S + +A
Sbjct: 1132 RLALQMGLEYVDVEMTLPDDIIQSITESR-GYSRIIASHHDPKGTMSWKNASWIQYYNRA 1190
Query: 165 -SGADIVKF---ATTALDITDVARVFQITVHSQ-VPIIGLVMGERGLISRILCAKFGGFL 219
D++K A TA D D+A+ +Q P+I + MG+ G +SR+L +F +
Sbjct: 1191 LQYGDVIKLVGIARTAEDNFDLAKFKARMQEAQKTPMIVMNMGKAGKLSRVLN-RFLTPV 1249
Query: 220 TFGTLENGIVSAPGQPTIKDL---------LDLYNFRQMGPDTKVFGIIGKPVGHSKSPI 270
+ L +APGQ + ++ LD YNF + GKP+ S+SP
Sbjct: 1250 SHPALP--FKAAPGQMSAAEIRRALALLGDLDPYNFY----------LFGKPISASRSPA 1297
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
L+N F+ +G + L D I + S+DF G S TIP K + DE+ A+
Sbjct: 1298 LHNTLFEQMGLPHQYHRLETDKIEDVREVLRSSDFGGASVTIPLKLDIMSQVDELSDAAR 1357
Query: 331 SIGAVNCII---RRQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
+IGAVN ++ + ++G +L G NTD+ G + A++D ++ S G V
Sbjct: 1358 AIGAVNTVVPLGKADTNGHRRLLGDNTDWRGMVHALQDA-----SIEEQADSDTRGAAMV 1412
Query: 386 VIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG----HALSLA-DLENFNP 439
V G+GG +A + + G + + IA R +A LA LS A D++ +P
Sbjct: 1413 V-GSGGTTRAAVFALHSLGFSPIYIAARNQAKADALAADFPSDYSLQGLSQASDIDKVSP 1471
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALG----------HYALVFDAVYTPKITRLLREA 489
+++ ++I +D PI + + ++ + Y P T +++ A
Sbjct: 1472 NVKVVI---STIPADRPID--PILRELVAVVLSRPAINEERRVLLEMAYKPSHTPIMQLA 1526
Query: 490 EESGA-TIVSGLEMFIGQAYEQYERFTGL 517
E++G T + GLE+ Q + Q+E +TG+
Sbjct: 1527 EDAGNWTTIPGLEVLASQGWYQFELWTGI 1555
>gi|350289476|gb|EGZ70701.1| putative PENTAFUNCTIONAL AROM polypeptide [Neurospora tetrasperma
FGSC 2509]
Length = 1563
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 252/535 (47%), Gaps = 62/535 (11%)
Query: 19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKE 75
++K P V + +V K +D+ G+D VE+R+D L++++P + + L
Sbjct: 1041 VKKKPHSFFVSLTVPNVSK-ALDIIPKVVVGSDAVELRVDLLEDYDPEFVAKQVALLRSA 1099
Query: 76 SPVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKP 134
+ +P ++T R + +GG++ D D + + R ++ G +Y+D+E+ + E +++ K
Sbjct: 1100 ARIPIVYTVRTVSQGGKFPDADYKLALKLYRTGLQAGVEYLDLEMTMPDEVIEAVTNAK- 1158
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQA-SGADIVKFATTALDITD---VARV-FQIT 189
+I S H+ + T S ++ + +A D+VK A ++ D +AR +
Sbjct: 1159 GYTHIIASHHDPKATLSWKNGGWVQYYNKALQHGDVVKLVGVARELADNFALARFKASLA 1218
Query: 190 VHSQVPIIGLVMGERGLISRILCAKFGGFLT---FGTLENGIVSAPGQPTIKDLLD-LYN 245
P+I L MG G +SR+L GFLT L + +APGQ + ++ L
Sbjct: 1219 AAHDKPLIALNMGAAGKLSRVL----NGFLTPVSHPALPSK--AAPGQLSAAEIRQALAL 1272
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF 305
++ P + F + G P+ S+SP L+N F+ G + D+ A + F
Sbjct: 1273 IGELEP--RSFHLFGNPISASRSPALHNALFRDNGLPHQYSLFETDNAADVKDLIQAPGF 1330
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIED 363
G S TIP K + DEV AK IGAVN II ++ K L G NTD++G + A
Sbjct: 1331 GGASVTIPLKLDIMPLLDEVSDAAKVIGAVNTIIPVRNGDKVTLRGDNTDWMGMVYA--- 1387
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
LR V S AG +V+GAGG +A + G A + + R DR + LAE
Sbjct: 1388 -LRNAGVVKCSKESPTAG---MVVGAGGTTRAAVHALHDLGFAPIYVVARNADRVKALAE 1443
Query: 423 TVGGHALSLADLENFN-PEDGMILANTTSIGMQPKVDETPIPKH-------------ALG 468
+ D+ + + PE+ + A +T+ QP V + IP +L
Sbjct: 1444 SFPAE----YDIRSLSTPEE--VAAESTA---QPSVVISTIPADKPIDQSMREVIVASLR 1494
Query: 469 HYA------LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
H + ++ + YTP+ T L++ AE++ + GLE+ Q + Q++ +TG+
Sbjct: 1495 HPSVADGKHVLLEMAYTPRHTPLMQLAEDAHWQTIPGLEVLAAQGWYQFQLWTGI 1549
>gi|452983606|gb|EME83364.1| hypothetical protein MYCFIDRAFT_38952 [Pseudocercospora fijiensis
CIRAD86]
Length = 1615
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 224/516 (43%), Gaps = 62/516 (12%)
Query: 49 GADLVEIRLDGL-----KNFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
GAD +E+R D L KN P E + L S +P +FT R + +GG++ D D
Sbjct: 1095 GADAIELRADLLVDPKSKNGLPTPDFLIEQVALLRSSSTLPLIFTLRSVSQGGRFPDNDL 1154
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + R + +G D++D+EL E + + + C +I S H+ + T + +
Sbjct: 1155 DLAIKLYREGLRMGFDFVDLELTAPVEVKKYVLSHR-KMCTIIASHHDPEATLAWSKGAP 1213
Query: 158 LVARIQASG---ADIVKFATTA--LDITDVARVFQIT---VHSQVPIIGLVMGERGLISR 209
+ S DIVK A D D + F+ ++ +P+I L MGE G +SR
Sbjct: 1214 EWRKHFESACEYGDIVKLVGVAKSFDDNDDLKAFKKDMAFLYPDLPVIALNMGELGKMSR 1273
Query: 210 ILCAKFGGFLT---FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHS 266
+ GF+T L + +APGQ + ++ + P K F + G+P+ S
Sbjct: 1274 VT----NGFMTPVSHPALPSK--AAPGQLSAAEIRKVLGLVAQIP-AKKFYLFGRPIQQS 1326
Query: 267 KSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326
+SP L+N F G ++ DDI S +F G S TIP K + D +D
Sbjct: 1327 RSPALHNTLFDLTGLPHIYSLHETDDIKTTVDIIRSAEFGGGSVTIPLKLDVMPLLDSID 1386
Query: 327 TVAKSIGAVNCII-RRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
+ A +IGAVN I+ + ++GK L G+NTD+ G + A+ N G + +
Sbjct: 1387 SAASTIGAVNTIVPTKTAEGKTILVGHNTDWQGMVLALR-------NAGAGAGNGVFKDS 1439
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLADLENFN-- 438
+VIG GG +A Y K G + + + R + +L ++ H LA ++
Sbjct: 1440 GMVIGGGGTARAAIYALKQMGYSPIYLVGRNKQKLGQLTQSFSEDYHIKLLATAKDVASI 1499
Query: 439 -----------------PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
P D ++ AN SI A ++ + Y P
Sbjct: 1500 PTEQQPVVAIGTIPADLPIDSVMEANLKSIFEVGATSANASGVVAANRGKVLLEMAYKPS 1559
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+T L++ AE SG V GLE Q Q+ +TG+
Sbjct: 1560 VTNLMKMAEASGWRRVGGLEALTAQGVHQFRLWTGI 1595
>gi|260881130|ref|ZP_05893311.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260849607|gb|EEX69614.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 293
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 145/278 (52%), Gaps = 30/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK G++G P+ HS SP+L N A + G + V++ L V + + + + F+G++
Sbjct: 12 TKNLGVMGWPIAHSLSPVLQNAAIEEAGLDYVYISLPVPPEKLKEAVAGLRAMQFSGWNV 71
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D VD A+ IGAVN ++ R DG L GYNTD +G + +
Sbjct: 72 TIPHKQAIMAELDVVDEDARIIGAVNTVVNR--DGHLTGYNTDCIGFMQPL--------- 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHAL 429
G S GK ++GAGGA +A+ +G +AK R+ + R +A LAE
Sbjct: 121 AQQGFSPK--GKAATLLGAGGAARAVIWGLLRAKVRRITLGVRNPAKAERLAEEFA---- 174
Query: 430 SLADLENFNPEDGM---------ILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYT 479
S +++ + EDG +L NTT +GM P V+ P+ L ALV+D +YT
Sbjct: 175 SYGEIQVLHWEDGAFLDHLAVTDLLVNTTPLGMYPHVEGMPPVDWTKLKKDALVYDIIYT 234
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P+ TR L EA+ G I++G M GQ + +TG+
Sbjct: 235 PERTRFLSEAQAHGHAIINGEGMLAGQGAAAFTLWTGV 272
>gi|145577929|gb|ABP82683.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
pulsiensis]
Length = 238
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 148/248 (59%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P+V+ TP+ +L + +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|150400882|ref|YP_001324648.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
gi|166219472|sp|A6UU64.1|AROE_META3 RecName: Full=Shikimate dehydrogenase
gi|150013585|gb|ABR56036.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
Length = 278
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++NEA K N V++ V+ ++ + + GF+
Sbjct: 6 TKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWKGFNI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D AK IGAVN + + + K GYNTD +GA +IE+
Sbjct: 66 TIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H 427
+ + +VIGAGG+ +A+ AK + I NRT ++A +A + +
Sbjct: 117 ----IIGEVKDYNILVIGAGGSSRAVCCEL-AKNNNLTIINRTVEKAEIIANDLSNKLNN 171
Query: 428 ALSLADLE-NFNPEDGMILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYTPKITRL 485
A+ L N+N + I+ NTTS+GM P VD + PI + A+V D +Y PK T
Sbjct: 172 AVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLF 231
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
L+EA+E G ++GL M I Q + +E +TG+ +N
Sbjct: 232 LKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDIN 268
>gi|449304879|gb|EMD00886.1| hypothetical protein BAUCODRAFT_187934 [Baudoinia compniacensis UAMH
10762]
Length = 1625
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 230/523 (43%), Gaps = 73/523 (13%)
Query: 49 GADLVEIRLDGLKNFN-----PRE-----NIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G D VE+R D L + P E + L + +P +FT R +GG+Y +E
Sbjct: 1106 GVDAVELRADLLVDRRSSDGMPSEEFLIDQVALLRSNTTLPLIFTLRSTSQGGRYPIEEK 1165
Query: 99 --ERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN----YQYTPSV 152
E + + R+A+ +G D++D+EL + + + + C +I S H+ +
Sbjct: 1166 TAEALRLYRVALRMGFDFVDLELTAPEQIKKFVLAHR-KMCNIIASHHDPRGQLSWADGA 1224
Query: 153 EDLSNLVARIQASGADIVKF---ATTALDITDVARVFQITVH---SQVPIIGLVMGERGL 206
ED + ++ G DIVK A ++ D D+ +VF+ V S +P I + MGE G
Sbjct: 1225 EDWIPHFEQARSFG-DIVKLVGVAKSSKDNDDL-KVFKSKVRNDDSDLPFIAMNMGEIGK 1282
Query: 207 ISRILCAKFGGFLTFGTLENGIVSAPGQPT--IKDLLDLYNFRQM----GPDTKV-FGII 259
+SR+ GF+T VS P PT + L RQ+ G +K F +
Sbjct: 1283 MSRVT----NGFMT-------PVSHPALPTKAAPEQLSATEIRQVLGIVGAISKTQFFLF 1331
Query: 260 GKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
GKP+ S+SP L+N F + G + D + S DF G S TIP K +
Sbjct: 1332 GKPISQSRSPALHNTLFAATGLPHEYRLHETDRVKDIESVIRSADFGGGSVTIPLKLDVM 1391
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQS-DGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
D VD A++IGAVN I+ ++ DG L GYNTD+ G + ++ + V G S
Sbjct: 1392 PLLDHVDDAARTIGAVNTIVPTETADGSMALVGYNTDWQGMVISLR-----KAGVKGNAS 1446
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADL 434
+ +V+G GG +A Y K G A + + R + ++ + +A+ +
Sbjct: 1447 PTAQQQAGMVVGGGGTARAAIYALKEMGFAPLYLVGRNKSKLEQMTSSFDASYAVRILST 1506
Query: 435 ENFN---PEDGM-ILANTTSIGMQP-------------KVDETPIPKHALGH---YALVF 474
E P D ++A T G P + D + L ++
Sbjct: 1507 EEDAAAIPADRQPVVAIGTIPGDSPIDPAMREILCTIFQDDASAAATAGLSDPNGQKVLL 1566
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ Y P +T L++ A SG V GLE +GQ EQ+ +TG+
Sbjct: 1567 EMAYKPSVTSLMQLASNSGWKTVPGLEALVGQGVEQFRLWTGI 1609
>gi|212531983|ref|XP_002146148.1| 3-dehydroquinate synthase, putative [Talaromyces marneffei ATCC
18224]
gi|327507645|sp|B6QCA7.1|ARO12_PENMQ RecName: Full=Pentafunctional AROM polypeptide 2; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|210071512|gb|EEA25601.1| 3-dehydroquinate synthase, putative [Talaromyces marneffei ATCC
18224]
Length = 1571
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 234/519 (45%), Gaps = 69/519 (13%)
Query: 41 DMGKANASGADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEG 90
D+ + ASG+D VE+R+D LK+ + E I +P +FT R + +G
Sbjct: 1062 DLLRTVASGSDAVELRVDLLKDPSSDSVIPSAEYVAEQISFYRSRVSLPIVFTIRTVSQG 1121
Query: 91 GQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN---- 145
G++ D ++ ++++ LA+ G ++ID+E+ + + K K+I S H+
Sbjct: 1122 GKFPDDAHDAALELIMLAIRSGCEFIDLEITFPEDLLRKVTESKAH-AKIIASHHDPRGK 1180
Query: 146 --------YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
QY +++ + A+ +K T+ D D A H VP+I
Sbjct: 1181 LNWANGSWIQYYNKALQYGDIIKLVGV--AETLKDNTSLKDFKDWAE----QAHPDVPVI 1234
Query: 198 GLVMGERGLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVF 256
+ MG++G +SR+L GFLT +APGQ + ++ + P K F
Sbjct: 1235 AINMGDKGQLSRML----NGFLTPVSHPALPFKAAPGQLSAAEIRRGLSIMGEIP-AKKF 1289
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKE 316
++GKPV S+SP ++N F+ G V+ L D + S DF G S TIP K
Sbjct: 1290 AVLGKPVSASRSPPMHNTLFEQNGLPHVYTRLETDKAQDVKEFIRSPDFGGASVTIPLKL 1349
Query: 317 AAVKCCDEVDTVAKSIGAVNCIIRRQ-SDG--KLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+ DE+ A+ IGAVN II + DG +L G NTD+ G + + + + +
Sbjct: 1350 DIIPLIDEILNEAEIIGAVNTIIPVEGKDGSTRLVGRNTDWSGIVRCLRE---AGAHSNE 1406
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLA 432
G SSAL VIG GG +A Y G + + + R+ ++ + +A T +
Sbjct: 1407 GKSSAL------VIGGGGTARAAIYALHHMGFSTIYVLGRSPEKIQNMASTF-PTGFDIR 1459
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKH--------------ALGHYALVFDAVY 478
LE+ N + + ++G P + PI + A ++ + Y
Sbjct: 1460 VLEHANDVESI---PRVAVGTIP--GDKPIESNIREILCTIFQRSGSAGDESGVLLEMAY 1514
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P +T L++ A + G T + GLE +GQ Q+E +TG+
Sbjct: 1515 KPSVTPLIQLASDYGWTTIPGLEALVGQGVYQFEYWTGI 1553
>gi|47096854|ref|ZP_00234434.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|254912797|ref|ZP_05262809.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937124|ref|ZP_05268821.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386047892|ref|YP_005966224.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47014773|gb|EAL05726.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|258609726|gb|EEW22334.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293590792|gb|EFF99126.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534883|gb|AEO04324.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 289
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 35/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-----LVDDIAKFFQTYSSNDFAG 307
T++ G+IG PV HSKSPI+YN +F+ G + ++ V D K +T+ + G
Sbjct: 9 TRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF---NLRG 65
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 66 ANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA--- 120
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAET 423
S +AGK +IGAGGA A+ GA+ + I + YD+A++ A +
Sbjct: 121 --------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAAS 172
Query: 424 VGG-------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+ H L D E N E IL N T +GM P ETPI ++ L+
Sbjct: 173 IKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIV 232
Query: 475 -DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D +Y PK T+LL ++E +G V GL M + Q E Y+ FTG
Sbjct: 233 ADIIYNPKKTQLLLDSEVAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|336234612|ref|YP_004587228.1| shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361467|gb|AEH47147.1| Shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
Length = 277
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K++ + G PV HS SP+++N+AF+ + + H+ + + +G + T
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKHLKDAINGVRALGISGLNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + D++D VA+ IGAVN I+ +G+L GYNTD G + A+E+
Sbjct: 63 IPHKTAVIPLLDDIDPVARRIGAVNTIV--NENGRLIGYNTDGPGYVQALEEE------- 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
V + GK +VIGAGGA + + + KGA+ + I NRT +A++L + V
Sbjct: 114 ---VHIDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAVSS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A SL + E E IL NTTS+GM P ++E P+ + +V D +Y P T+ L
Sbjct: 171 AACSLNEAEERLGEYD-ILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKWL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA A + +G+ MF+ Q +E++TG
Sbjct: 230 KEARRRKAIVQNGVGMFVYQGALAFEKWTG 259
>gi|157693067|ref|YP_001487529.1| shikimate 5-dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681825|gb|ABV62969.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 280
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 146/271 (53%), Gaps = 22/271 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G+IG PVGHS SP ++N A K G +G + V DD+ + +GF+ T+
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAINGMKALGISGFNVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK ++ D++D A+ + AVN + R +G+L GYNTD G + ++ + L
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEEGQLVGYNTDGEGFLHSLLEAL------- 114
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--- 427
L F++IGAGGA +A+ Y A A I NRT ++A L ++ G+
Sbjct: 115 ---DQPLTELSFLLIGAGGAARAI-YTTIADYAPKSFDITNRTIEKAEALIKSADGNITS 170
Query: 428 -ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A++L E E +I+ +TTSIGM P V+ETPI A+V D VY P T+LL
Sbjct: 171 SAITLKTAEEQLGEYDVII-HTTSIGMHPNVEETPISLANAKKTAVVCDIVYNPIETKLL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
REA G V G+ MF+GQA +E +TG+
Sbjct: 230 REAAGLGLKTVDGVGMFVGQAARAFELWTGI 260
>gi|357010654|ref|ZP_09075653.1| shikimate 5-dehydrogenase [Paenibacillus elgii B69]
Length = 289
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 31/289 (10%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDF 305
++ T ++G+ G P+ HSKSPI+ N AF++ G N + H+L + + F
Sbjct: 5 KLDSHTILYGVFGDPIRHSKSPIMLNRAFEAAGINAAYGAFHILPGTLKDAVAGIRALQF 64
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-- 363
G + TIPHK + DE+D A +IGAVN I+ G+L GYNTD +G + ++ +
Sbjct: 65 RGVNVTIPHKVEVMSYLDEIDEGAHAIGAVNTIV--NEGGRLIGYNTDGIGYMRSLREET 122
Query: 364 --GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421
L+GR K+ ++ G A A+ + IANRT ++A +LA
Sbjct: 123 GISLKGR-------------KVLMIGAGGAARGVGYALAREGAEHIYIANRTKEKALDLA 169
Query: 422 ET------VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
+ V GH L ++ E +I+ N T +GM P VDE P+ + +V D
Sbjct: 170 SSMSEFGSVSGHGLD--EISKLAGEAALIV-NNTLLGMHPNVDEVPMDISLIRPETVVSD 226
Query: 476 AVYTPKITRLLREA-EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
VY P ITR LREA ++ GA I SGL MFI Q +E +TG P + A
Sbjct: 227 LVYNPLITRFLREARDQRGAVIHSGLGMFIYQGAYAFEYWTGQPAPIAA 275
>gi|383753808|ref|YP_005432711.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365860|dbj|BAL82688.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 283
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 22/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+ G+IG P+ HS SP+L N A + G + + L V + +A+ + + G++
Sbjct: 6 TQNLGVIGWPIAHSLSPVLQNAAIEKAGIDYNYTALPVAPEKLAEAVTGLKALHYRGWNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK A + DE+D A+ IGAVN ++ +GKL G+NTD +G + A+
Sbjct: 66 TIPHKTAIMPLLDEIDEDARIIGAVNTVV--NDNGKLKGFNTDCLGFMGALTKR------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELA---ETVGG 426
+A+ GK V++GAGGA +A+ +G KA+ VV+ R +A LA G
Sbjct: 118 -----QAAIKGKKVVLLGAGGAARAVIWGLIKAEAQEVVLGVRNPAKAESLAAEFSRYGK 172
Query: 427 HALSLADLENFNP--EDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKIT 483
+ + E F D +L NTT +GM PKVD P + + A+V+D +YTP T
Sbjct: 173 VTVCHWESEEFTQVLADCALLVNTTPLGMTPKVDACPPVDWSKVNPSAVVYDIIYTPAET 232
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LR+A E G I++G EM GQ + +TG
Sbjct: 233 LFLRQAREHGHVIINGEEMLAGQGAAALQLWTG 265
>gi|52549978|gb|AAU83827.1| shikimate 5-dehydrogenase [uncultured archaeon GZfos34A6]
Length = 272
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 148/266 (55%), Gaps = 21/266 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++GIIG PV HS SP+++N AFK +G + V++ V +++ + S +G + TI
Sbjct: 4 IYGIIGDPVAHSLSPVMHNAAFKKLGLDAVYIAFCVPLEELGDAIRGAKSLGISGLNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P KE A+ + VAK IGA+N I + GYNTD +GA+ +E+ +
Sbjct: 64 PLKEKALSFV-ATEEVAKKIGAINTIDFSSTP---TGYNTDGIGALMVLEETV------- 112
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALSL 431
+ GK ++IGAGGA +A+++ A GA V +ANRT R+ +LA + +++SL
Sbjct: 113 ----GEVRGKNVLIIGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANSISL 168
Query: 432 -ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
A+L+N D IL N TS+GM P D T I + +VFD VY P T+LL+EA+
Sbjct: 169 GAELKN-QIRDSDILINATSVGMHPNEDATLITADLMHPDLVVFDIVYNPIETKLLKEAK 227
Query: 491 ESGA-TIVSGLEMFIGQAYEQYERFT 515
+G V+G++M + Q + +T
Sbjct: 228 RAGVKKTVNGVKMLVYQGAASFNLWT 253
>gi|290893185|ref|ZP_06556173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404408677|ref|YP_006691392.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|290557347|gb|EFD90873.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404242826|emb|CBY64226.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2376]
Length = 289
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSPI+YN +F+ G + ++ + +A + + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S +AGK +IGAGGA A+ GA+ + I + YD+A++ ++
Sbjct: 121 -----SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
H L D E N E IL N T +GM P ETPI ++ L V D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVFRKELIVTDI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|222445470|ref|ZP_03607985.1| hypothetical protein METSMIALI_01109 [Methanobrevibacter smithii
DSM 2375]
gi|222435035|gb|EEE42200.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2375]
Length = 281
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 148/274 (54%), Gaps = 26/274 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++N AF+ +G + +V V +++ S + GF+
Sbjct: 6 TKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIKGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D +AK IGAVN I ++ + GYNTD +G I AI
Sbjct: 66 TIPHKINVMKYLDKLDPIAKLIGAVNTIDFKE----MKGYNTDGIGCIKAI--------- 112
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHAL 429
G +++ K VV GAGGA +A++ Y A+ + I NR ++A+ LAE V L
Sbjct: 113 ---GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAEDVKNSKL 169
Query: 430 S-LADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKI 482
+ D ++ + D IL +TT +GM P V++ I K H LV D VY P
Sbjct: 170 TDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVNDIVYNPNE 229
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL EA ++GAT V G++M + Q E +E +TG
Sbjct: 230 TVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTG 263
>gi|220928114|ref|YP_002505023.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
gi|219998442|gb|ACL75043.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
Length = 294
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 23/276 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T+++G++G PV H+KSP ++N FK N +++ + VD + + + + F+GF+
Sbjct: 11 TQLYGVLGNPVQHTKSPFIHNTLFKEFEINAIYLPIHVDKGKLEQVMDGFRAIKFSGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K+ + DEV K +GA+N +I + DG+ GYNTD G + DG
Sbjct: 71 TVPFKKDIINHLDEVSAEGKLMGAINTVINK--DGRFIGYNTDAEGFVRDFSDGFE---- 124
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH-- 427
+ GK +++GAGG +A+A ++G + I NRT A+ ++ V +
Sbjct: 125 ------TTFKGKRVMLLGAGGTSRAIAVRLASEGIEHLTIVNRTEANAQSISNLVNSNFG 178
Query: 428 -----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTPK 481
L ++ + E+ I+ NTT GM +D TP LV+D +Y PK
Sbjct: 179 DIVSTILPEKEILDRELENNHIIVNTTPAGMSTYLDSTPFDLDFNFNGTQLVYDVLYVPK 238
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TR L +AE++G I +G M I Q +E +TG+
Sbjct: 239 KTRFLEQAEKTGCKIRNGFGMLINQGVSAFEIWTGM 274
>gi|171690198|ref|XP_001910024.1| hypothetical protein [Podospora anserina S mat+]
gi|327507669|sp|B2B223.1|ARO1_PODAN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|170945047|emb|CAP71158.1| unnamed protein product [Podospora anserina S mat+]
Length = 1567
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 252/538 (46%), Gaps = 83/538 (15%)
Query: 26 ICVPIMGESVD---KMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVP 79
+ VP + +++D K+VV G+D VE+R+D L++ NP + L + +P
Sbjct: 1051 LTVPNVAKALDIIPKVVV--------GSDAVELRVDLLESLNPEFVATQVALLRSAAKIP 1102
Query: 80 TLFTYRPIWEGGQYDGDENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
++T R I +GG++ D+ +R +++ ++ + G +Y+D+E+ + + ++ K
Sbjct: 1103 IVYTIRTISQGGKFPDDDYKRALELYQIGLRTGVEYLDLEMTMPEDVLQTVTETK-GFTH 1161
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQA-SGADIVKFATTALDITDVA-----RVFQITVHS 192
+I S H+ + S ++ + +A D++K A +++D ++ + H
Sbjct: 1162 IIASHHDPENKLSWKNGGWIPFYNKALQYGDVIKLVGMAREVSDNFDLTNFKMRMLEAHK 1221
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLT---FGTLENGIVSAPGQ---PTIKDLLDLYNF 246
+ PII L MG G +SR+L GFLT L + +APGQ I+ L L
Sbjct: 1222 K-PIIALNMGTAGKLSRVL----NGFLTPVSHPALPSK--AAPGQLSAAEIRQALSLVG- 1273
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFA 306
++ P K F + GKP+ S+SP L+N F G + D A S DF
Sbjct: 1274 -ELEP--KSFYLFGKPISSSRSPALHNGLFAQTGLPHQYSLFETDVAADVKDIIRSADFG 1330
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK----LFGYNTDYVGAI-SAI 361
G S TIP K + DEV A +IGAVN +I +G L G NTD++G + S
Sbjct: 1331 GASVTIPLKLDIIPLLDEVSDAATAIGAVNTVIPVSPEGSDKTILRGDNTDWMGMVFSLR 1390
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRAREL 420
+ G+ R + G +V+G+GG +A Y G + + I R+ DR + +
Sbjct: 1391 QAGIAPRTKTNPGAG--------MVVGSGGTTRAAVYALHDLGYSPIHIVARSPDRVKAI 1442
Query: 421 AETVGGHALSLADLENFN------PE------DGMILANTTSIGMQPKVDET--PIPKHA 466
A++ E++N PE D + +SI +D++ + +
Sbjct: 1443 ADSFP---------EDYNIQTLSTPEEVKAATDALPTVVISSIPADKPIDQSMREVLVAS 1493
Query: 467 LGHYA-------LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L H A ++ + YTP+ T L++ AE++G + GLE+ Q + Q++ +TG+
Sbjct: 1494 LRHPAKSEKEPRVLLEMAYTPRHTPLMQLAEDAGWKTIPGLEVLAAQGWYQFQLWTGV 1551
>gi|194017689|ref|ZP_03056299.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194010589|gb|EDW20161.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 280
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 147/271 (54%), Gaps = 22/271 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G+IG PVGHS SP ++N A K G +G + V DD+ + +GF+ T+
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGFNVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK ++ D++D A+ + AVN + R G+L GYNTD G + ++ + L L
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEGGQLVGYNTDGEGFLHSLLEALDQPL--- 118
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--- 427
S L+ F++IGAGGA A+ Y A A I NRT ++A L E+ G+
Sbjct: 119 ----SELS---FLMIGAGGAANAI-YTTIADYAPKSFDITNRTIEKAEALIESANGNFTS 170
Query: 428 -ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A++L E E +I+ +TTSIGM P V+ETPI A+V D VY P T+LL
Sbjct: 171 SAITLKTAEEQLGEYDVII-HTTSIGMHPNVEETPISLVNAKKTAVVCDIVYNPIETKLL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
REA G V G+ MF+GQA +E +TG+
Sbjct: 230 REAAGLGLKTVDGVGMFVGQAARAFELWTGI 260
>gi|452844436|gb|EME46370.1| hypothetical protein DOTSEDRAFT_70392 [Dothistroma septosporum NZE10]
Length = 1621
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 230/522 (44%), Gaps = 73/522 (13%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+D +E+R D L + E + L S +P +FT R + +GG++ DGD
Sbjct: 1102 GSDAIELRADLLVDEKSTDGLSSPDFLTEQVSLLRSSSTLPLIFTLRSVSQGGRFPDGDS 1161
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED-LS 156
+ + +A+ +G D++D+EL + + + + + C +I S H+ + T S D
Sbjct: 1162 TRAIALYAVALRMGFDFVDLELTSLPDVKEYVLNHR-KMCTIIASHHDPKATLSWADGAK 1220
Query: 157 NLVARIQASG--ADIVKFATTAL--DITDVARVFQ---ITVHSQVPIIGLVMGERGLISR 209
+ + A+ DIVK A D D + F+ ++ P I + M E G +SR
Sbjct: 1221 DWIPHFDAAQEYGDIVKLVGVAKTDDDNDDLKTFKKWAAKEYAHKPFIAMNMAEIGKMSR 1280
Query: 210 ILCAKFGGFLT---FGTLENGIVSAPGQ---PTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+ GF+T L + +APGQ I+ +L L + K F I GKPV
Sbjct: 1281 V----NNGFMTPVSHPALPSK--AAPGQLSAAEIRKVLGLVGHIK----PKKFCIFGKPV 1330
Query: 264 GHSKSPILYNEAFKSVGFN---GVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
HS+SP L+N F + G G+ LVDD + + SS DF G S TIP K +
Sbjct: 1331 QHSRSPALHNTLFDATGLPHAYGLHETDLVDD--EVQKIISSPDFGGASVTIPLKLDIMP 1388
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDG---KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
DEVD AK+IGAVN I+ ++DG L G+NTD+ G + A+ + G + G +
Sbjct: 1389 LLDEVDPAAKTIGAVNTIVPVENDGGRATLIGHNTDWQGMVLALRNA--GAHSAPGQRHA 1446
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG----HALSLA 432
A +V+G GG +A Y K G + + + R + LA L A
Sbjct: 1447 AA-----MVVGGGGTARAAIYALKEMGHSPIYLVGRNKSKLAALAGNFSTDYNVQLLGSA 1501
Query: 433 D-LENFNPEDGMILANTT---SIGMQPKVDETPIPKHALGHYA-------------LVFD 475
D + E I+A T I P + E +G A ++ +
Sbjct: 1502 DEVRTIPAEKQPIVAVGTIPGDIEPDPAMKEILTAIFEVGSTASNAAGVTGANANKVLLE 1561
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L+ A G V GLE +GQ Q+ +T +
Sbjct: 1562 MAYKPAVTPLMEIASHGGWRTVPGLEALVGQGVHQFRLWTAI 1603
>gi|16804275|ref|NP_465760.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|386051212|ref|YP_005969203.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404284734|ref|YP_006685631.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|405759288|ref|YP_006688564.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|16411706|emb|CAD00314.1| lmo2236 [Listeria monocytogenes EGD-e]
gi|346425058|gb|AEO26583.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404234236|emb|CBY55639.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2372]
gi|404237170|emb|CBY58572.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2479]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSPI+YN +F+ G + ++ + +A + + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S +AGK +IGAGGA A+ GA+ + I + YD+A++ ++
Sbjct: 121 -----SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQ 175
Query: 427 -------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
H L D E N E IL N T +GM P ETPI ++ L+ D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|145577945|gb|ABP82691.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
graciosensis]
Length = 238
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 146/248 (58%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLSMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLTDVGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P+V TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|268315725|ref|YP_003289444.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262333259|gb|ACY47056.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 297
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 143/281 (50%), Gaps = 31/281 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+ ++G PV HS SP+++N F++ G + V++ V D + + + FAG +
Sbjct: 13 TRPIALLGDPVAHSFSPLIHNTGFQTQGLDFVYLACRVPKDALPEAIAGLRALGFAGANV 72
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLR 366
TIPHKEA D A++IGAVN I+ R +DG +L G NTD G + ++
Sbjct: 73 TIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGAVELIGDNTDVEGFLEPLQS--- 128
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG--AKAKGARVVIANRTYDRARELAETV 424
++ LAG VV+GAGGA +A+ Y + + R+ I RT R LA
Sbjct: 129 --------LADRLAGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGEALAADF 180
Query: 425 GGHALSLADLENFNPEDGM-------ILANTTSIGMQPKVDETPIPKHA--LGHYALVFD 475
+ A L+ P++ ++ N T +GM P V +P P HA G +V+D
Sbjct: 181 ATYDTRRA-LQVMAPDEAAPAVRSACLIVNATPVGMHPHVAASPWP-HAEDFGPEQIVYD 238
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY P TRLLREA GAT + GL M IGQA Y ++TG
Sbjct: 239 LVYNPVRTRLLREAAARGATTIDGLTMLIGQAAAAYRQWTG 279
>gi|145577897|gb|ABP82667.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 146/248 (58%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P+V TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|389571866|ref|ZP_10161954.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
gi|388428352|gb|EIL86149.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
Length = 280
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 148/270 (54%), Gaps = 20/270 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G+IG PVGHS SP ++N A K G +G + V DD+ + +G + T+
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGINVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK +K D++D A+ +GAVN + R + D +L GYNTD G + ++ + L L
Sbjct: 64 PHKVEIMKYLDKIDVTAERLGAVNTV-RLEGD-QLVGYNTDGEGFLHSLLEALDQPL--- 118
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALS 430
S L+ F+++GAGGA +A+ Y A+ A + IANRT ++A L E+ G S
Sbjct: 119 ----SELS---FLLLGAGGAARAI-YTTIAEYAPKQFDIANRTIEKAEALIESADGKITS 170
Query: 431 LADLENFNPE---DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A N E + ++ +TTSIGM P V+ETPI A+V D VY P T+LL
Sbjct: 171 RAIALNTAEERLGEYDVIIHTTSIGMYPNVEETPISLANAKKTAVVCDIVYNPIETKLLS 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
EA G V G+ MF+GQA +E +TG+
Sbjct: 231 EAAGLGLKTVDGVGMFVGQAVRAFELWTGI 260
>gi|296413789|ref|XP_002836591.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630419|emb|CAZ80782.1| unnamed protein product [Tuber melanosporum]
Length = 1554
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 230/507 (45%), Gaps = 64/507 (12%)
Query: 49 GADLVEIRLDGLKNFNP------------RENIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
G+D VE+R+D L +P E + L ++ +P +FT R +GG++ +
Sbjct: 1057 GSDAVEVRIDLL--IDPTDSNGVATPAFVSEQLAVLRGKTQLPVVFTIRTKSQGGKFPDE 1114
Query: 97 ENERVDVLRLA-MELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
+++R L LA + +G +YID+E + + K K+I S H+ +
Sbjct: 1115 DHQRALELYLAGIRMGLEYIDLETTWPVALLEKVTSGK-GYSKIIASHHDLGGDLCWRNA 1173
Query: 156 SNLVA-RIQASGADIVKF---ATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRIL 211
S + + D++K A + D D+ + + +I L MGE+G +SRIL
Sbjct: 1174 SWISKFNMTLKYGDVIKLIGQAKSIQDNYDLENFRKYAATHETRMIALNMGEKGKLSRIL 1233
Query: 212 CAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPI 270
FLT T +APGQ + ++ + M +TK F I G P+ HS+SP
Sbjct: 1234 NT----FLTPVTHPALPFKAAPGQLSTVEIHQALSLMGM-LETKKFYIFGTPLSHSRSPA 1288
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
L+N F+S+G + D++ + ++ +F G S TIPHK + + + A+
Sbjct: 1289 LHNTLFQSLGLPHTYHLFESADVSATKEIMNTENFGGASVTIPHKISIIPLLSSISAHAQ 1348
Query: 331 SIGAVNCIIR-RQSDG--KLFGYNTDYVGAISAIEDGLR-GRLNVSGGVSSALAGKLFVV 386
+IGAVN +I DG +L G N D+VG I++ LR G G S+A A +V
Sbjct: 1349 AIGAVNTVIPVTTEDGTRRLTGDNFDWVG----IQNSLRIGGATEPEGHSTATA----LV 1400
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMIL 445
IGAGG +A Y G R+ + NRT + + L E A + +N L
Sbjct: 1401 IGAGGTSRAAVYALHMMGYGRIYVVNRTPENLKSLVE---------AFPKEYNLMAINSL 1451
Query: 446 ANTTSIGMQPKVDETPIPKH---------------ALGHYALVF-DAVYTPKITRLLREA 489
A S+ ++P +P A G A V + Y P +T ++ A
Sbjct: 1452 AEAKSVEVKPITAVCTVPADKPIDDALKVILWELLAGGACAGVLTEMAYKPTVTEVMTLA 1511
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
E +G +V GLE +GQ Q+E FTG
Sbjct: 1512 EGAGWRVVPGLEGLVGQGVAQFEVFTG 1538
>gi|261349968|ref|ZP_05975385.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
gi|288860751|gb|EFC93049.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 281
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 148/274 (54%), Gaps = 26/274 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++N AF+ +G + +V V +++ S + GF+
Sbjct: 6 TKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIKGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D++AK IGAVN I ++ + GYNTD +G I AI
Sbjct: 66 TIPHKINVMKYLDKLDSIAKLIGAVNTIDFKE----MKGYNTDGIGCIKAI--------- 112
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHAL 429
G +++ K VV GAGGA +A++ Y A+ + I NR ++A+ LAE V L
Sbjct: 113 ---GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAEDVKNSKL 169
Query: 430 S-LADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKI 482
+ D ++ + D IL +TT +GM V+E I K H LV D VY P
Sbjct: 170 TDNVDFDSIDKIVGYVSDADILIDTTPVGMSSHVNEEAIVKAEDMHSDLVVNDIVYNPNE 229
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL EA ++GAT V G++M + Q E +E +TG
Sbjct: 230 TVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTG 263
>gi|386044549|ref|YP_005963354.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404411543|ref|YP_006697131.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|345537783|gb|AEO07223.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404231369|emb|CBY52773.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC5850]
Length = 289
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 35/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-----LVDDIAKFFQTYSSNDFAG 307
T++ G+IG P+ HSKSPI+YN +F+ G + ++ V D K +T+ + G
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF---NLRG 65
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 66 ANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA--- 120
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAET 423
S + GK +IGAGGA A+ GA+ + I + YD+A++ A +
Sbjct: 121 --------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAAS 172
Query: 424 VGG-------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+ H L D E N E IL N T +GM P ETPI ++ L+
Sbjct: 173 IKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIV 232
Query: 475 -DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D +Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 233 ADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|386054491|ref|YP_005972049.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346647142|gb|AEO39767.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 289
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 35/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-----LVDDIAKFFQTYSSNDFAG 307
T++ G+IG P+ HSKSPI+YN +F+ G + ++ V D K +T+ + G
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF---NLRG 65
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 66 ANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA--- 120
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAET 423
S + GK +IGAGGA A+ GA+ + I + YD+A++ A +
Sbjct: 121 --------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAAS 172
Query: 424 VGG-------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+ H L D E N E IL N T +GM P ETPI ++ L+
Sbjct: 173 IKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIV 232
Query: 475 -DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D +Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 233 ADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|46578532|ref|YP_009340.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152014|ref|YP_005700950.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris RCH1]
gi|46447943|gb|AAS94599.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311232458|gb|ADP85312.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris RCH1]
Length = 301
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 142/269 (52%), Gaps = 24/269 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++GI+G P+GH+ SP+L+N F V++ V A F + + G S T
Sbjct: 35 RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVT 94
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE-DGLRGRLN 370
IPHKE A++ CD V A+++GAVN + DG + G NTD G ++ + G+R
Sbjct: 95 IPHKEEALRLCDRVTDRARAVGAVNTLF--LEDGVVCGENTDVTGFLAPLRARGVR---- 148
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHAL 429
+ AL V+GAGGA +A+ G G R V I+NRT+D+A ELA G +
Sbjct: 149 ----IDEAL------VLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADVV 198
Query: 430 SLADLENFNPEDGMILANTTSIGMQ-PKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
E + G+++ NTT GMQ ++ E+P+P+ A + +D VY P TR L +
Sbjct: 199 PWD--ERGSAAAGLVV-NTTPCGMQGARMGESPLPEGAFSGRGMAYDLVYNPLTTRFLAD 255
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A +G GL MF+ Q EQ+ +TGL
Sbjct: 256 ARAAGWETQDGLGMFVEQGREQFRIWTGL 284
>gi|325262925|ref|ZP_08129661.1| shikimate dehydrogenase [Clostridium sp. D5]
gi|324032019|gb|EGB93298.1| shikimate dehydrogenase [Clostridium sp. D5]
Length = 276
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 22/256 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
FG++G +GHS SP ++ + + G + L ++ + + + G + T+P
Sbjct: 11 FGVLGNQLGHSLSPEIHEDLLRQQNICGTYKKYELNENEAPHILEVMKAENIRGMNVTMP 70
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE + D +D A+ IGAVN I+ + DGK +GYNTDY+GA+S
Sbjct: 71 YKEVIYQLMDVLDPHAEKIGAVNTILMK--DGKFYGYNTDYIGAVSMFH---------KD 119
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-HALSL 431
GVS LAG+ V++G+GGA K L YG GA ++ +A R L E H SL
Sbjct: 120 GVS--LAGREIVILGSGGAAKGLIYGFHMDGAAKITVAARNEKAIEYLEERFPYIHTCSL 177
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
D+ G IL NTT +GM P + E+P+ + + + D VY P IT LR A+E
Sbjct: 178 TDIPA-----GDILVNTTPLGMYPHIGESPVDVSVIRQFKVASDIVYNPLITEFLRIAKE 232
Query: 492 SGATIVSGLEMFIGQA 507
G IV+GL M + QA
Sbjct: 233 EGLQIVTGLMMLVDQA 248
>gi|312110148|ref|YP_003988464.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|423719183|ref|ZP_17693365.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215249|gb|ADP73853.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|383368086|gb|EID45361.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 277
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K++ + G PV HS SP+++N+AF+ + + H+ + + +G + T
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKQLKDAINGVRALGISGLNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + D++D A+ IGAVN I+ +G+L GYNTD G + A+E+
Sbjct: 63 IPHKTAVIPLLDDIDPAARRIGAVNTIV--NENGRLIGYNTDGPGYVQALEEE------- 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
V + GK +VIGAGGA + + + KGA+ + I NRT +A++L + V
Sbjct: 114 ---VHIDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAVSS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A SL + E E IL NTTS+GM P ++E P+ + +V D +Y P T+ L
Sbjct: 171 AACSLNEAEERLGEYD-ILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKWL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA A + +G+ MF+ Q +E++TG
Sbjct: 230 KEARRRKAIVQNGVGMFVYQGALAFEKWTG 259
>gi|303317582|ref|XP_003068793.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|327507658|sp|C5PA86.1|ARO1_COCP7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240108474|gb|EER26648.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1589
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 233/513 (45%), Gaps = 58/513 (11%)
Query: 49 GADLVEIRLDGL-----KNFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L N P E I L +P +FT R +GG++ D +
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS- 156
+ +D+ RLA+ +G++++D+E+ ++ K K+I S H+ + S + S
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHILRAVTEMK-GFSKIIASHHDVSGSLSWANGSW 1189
Query: 157 -NLVARIQASGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISRIL 211
+ G DI+K A LD R F+ ++P+I + MGE+G +SRIL
Sbjct: 1190 GQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAHEIPVIAINMGEKGRLSRIL 1248
Query: 212 CAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSP 269
GF+T + +APGQ + +D+ MG + + F I GKPV S+SP
Sbjct: 1249 ----NGFMTPVSHPKLPFKAAPGQLSAQDIRK--GLSLMGEIEPRKFAIFGKPVSASRSP 1302
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N F VG + L D++ + + DF G S TIP K + DE+ A
Sbjct: 1303 AMHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEA 1362
Query: 330 KSIGAVNCII---RRQSD----GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ IGAVN I+ R D +L GYNTD+ G + + G+ +A+ G
Sbjct: 1363 QVIGAVNTIVPIPRGPGDMTGYPRLIGYNTDWQGMVRCLR---HGKAISPSFADTAVPG- 1418
Query: 383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET--------VGGHALSLAD 433
+VIG GG +A + + + + + R+ + E+A T V A SL +
Sbjct: 1419 --LVIGGGGTARAAIHALYSMSYSPIYLIGRSEAKVAEMASTFPEKYSVQVLKDATSLEN 1476
Query: 434 LENFN----PEDGMILANTTSIGMQ-----PKVDETPIPKHALGHYALVFDAVYTPKITR 484
L P D I + + + +VD K + ++ + Y P IT
Sbjct: 1477 LPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMAYKPDITP 1536
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L + A +SG + + GLE +GQ Q+E +TG+
Sbjct: 1537 LSQLASDSGWSTIPGLEALVGQGVHQFELWTGI 1569
>gi|345302028|ref|YP_004823930.1| shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111261|gb|AEN72093.1| Shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 297
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 142/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+ ++G PV HS SP+++N F++ G + V++ V D + + + FAG +
Sbjct: 13 TRPVALLGDPVAHSFSPLIHNTGFRTQGLDYVYLACRVPKDALPEAIAGLRALGFAGANV 72
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK----LFGYNTDYVGAISAIEDGLR 366
TIPHKEA D A++IGAVN I+ R +DG L G NTD G + ++
Sbjct: 73 TIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGTVALIGDNTDVEGFLEPLQP--- 128
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG--AKAKGARVVIANRTYDRARELAE-- 422
++ L G VV+GAGGA +A+ Y + + R+ I RT R LA
Sbjct: 129 --------LADRLTGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGEALAADF 180
Query: 423 -TVGGH-ALSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHA--LGHYALVFDA 476
T H AL +A + P ++ N T +GM P V +P P HA G +V+D
Sbjct: 181 ATYDTHGALQVAAPDQAAPAIRSARLIVNATPVGMHPHVAASPWP-HAEDFGPEQIVYDL 239
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY P TRLLREA GAT + GL M IGQA Y ++TG
Sbjct: 240 VYNPVRTRLLREAATRGATPIDGLTMLIGQAAAAYRQWTG 279
>gi|145577947|gb|ABP82692.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
ostriniae]
Length = 238
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|310798573|gb|EFQ33466.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Glomerella graminicola
M1.001]
Length = 1579
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 235/501 (46%), Gaps = 51/501 (10%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDE-NERVDVL 104
G+D VE+R+D L++++ + L + VP +FT R +GG++ D ++ + +
Sbjct: 1074 GSDAVELRVDLLQDYSEESVAHQVALLRSVANVPIIFTLRTKAQGGRFPDDAYDQGLGLY 1133
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
+ A+ +G ++IDVE+ + + ++ K C++I S H+ Q S +D S + +A
Sbjct: 1134 QKAIRMGVEFIDVEMTLPEQVIQAVVENK-GLCRIIASHHDPQGKLSWKDGSWIPFYNKA 1192
Query: 165 -SGADIVKFATTALDITDVARVFQ-----ITVHSQVPIIGLVMGERGLISRILCAKFGGF 218
D++K A I D + Q ++ H + PII L MG G +SR+ F G
Sbjct: 1193 LQWGDVIKLVGIAQHIEDNYALAQFKSAMLSSH-KTPIIALNMGTAGKLSRV----FNGC 1247
Query: 219 LTFGTLEN-GIVSAPGQPT---IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 274
LT + + +APGQ + I+ L L G + F + GKP+ S+SP L+N
Sbjct: 1248 LTPVSHPDLPFKAAPGQLSAAEIRKALALLG----GISPQSFYLFGKPISASRSPALHNT 1303
Query: 275 AFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
F G ++ D A + + DF G S TIP K +K DE+ A+ IGA
Sbjct: 1304 LFALTGLPHRYLLKETDSAADVREAIRAPDFGGASVTIPLKLDIMKEIDEISESARIIGA 1363
Query: 335 VNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG 390
VN II + +G KL G NTD+ G + +++ + +G SA+ VIG+G
Sbjct: 1364 VNTIIPVRDNGDVNAKLVGDNTDWSGMVHSLQSAGVASRSATGVQRSAM------VIGSG 1417
Query: 391 GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------HALSLADLENFNPEDG 442
G +A + A G + A R ET+ AL A + P
Sbjct: 1418 GTTRAAIFALHALGFGPIYA---LARNSSNLETLKASFPPEYRIEALKSASEASTLPSSP 1474
Query: 443 MILANTTSIG--MQPKVDET--PIPKH--ALGHYALVFDAVYTPKITRLLREAEESGATI 496
++ +T + P + ET + +H A ++ + Y P+ T L++ AEE+G
Sbjct: 1475 TVMVSTIPADKPVDPSLRETLAVVLRHEPATEEKRVLLEMAYMPRYTPLMQLAEEAGWAT 1534
Query: 497 VSGLEMFIGQAYEQYERFTGL 517
+ GLE+ Q + Q++++T +
Sbjct: 1535 IPGLEVLSAQGWYQFQKWTDI 1555
>gi|302509946|ref|XP_003016933.1| repressor protein [Arthroderma benhamiae CBS 112371]
gi|291180503|gb|EFE36288.1| repressor protein [Arthroderma benhamiae CBS 112371]
Length = 1571
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 231/512 (45%), Gaps = 76/512 (14%)
Query: 44 KANASGADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY 93
+A + G+ VE+R+D LK+ + E I L ++ +P +FT R +GG +
Sbjct: 1069 QAASFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQASLPLIFTIRTKAQGGLF 1128
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYT 149
D +E + + +LA+ +G++++D+E+ F D++ E K+I S H+
Sbjct: 1129 PDSAVDEALGLYKLAIRMGSEFVDLEIS----FPDNLLHAVTEIKGFSKIIASHHDVNGQ 1184
Query: 150 PSVEDLSNLVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGER 204
S + S + +A D++K A + D + Q ++ +PII + MG +
Sbjct: 1185 LSWSNGSWIQYYNKALQYGDVIKLIGVAKSLDDNLTLQQFKAWAERSYPIPIIAINMGNK 1244
Query: 205 GLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKP 262
G +SRIL GF+T +APGQ + K++ MG D K F + GKP
Sbjct: 1245 GRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTL--MGELDAKEFALFGKP 1298
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
+ S+SP L+N F GF + L D++ + S +F G S TIP KE ++
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
DE+ AK IGAVN I+ +G KL GYNTD+ G ++D G + + G S+
Sbjct: 1359 DEISPEAKIIGAVNTIVPVIEEGKATRKLVGYNTDWQGMARCLKDA--GAIYLKNGESA- 1415
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF 437
+ IG+GG +A Y + G + + + RT +LA + +
Sbjct: 1416 ------LTIGSGGTARAAVYSLHSMGYSPIYLVGRTPANLTKLASSFPAE---------Y 1460
Query: 438 NPEDGMILANTTSIGMQPKVDETPIP-----------------KHAL--GHYALVFDAVY 478
N + ++ + S+ PKV + IP K A ++ D Y
Sbjct: 1461 NVQ---VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELITFIMKKAQEGSEECIILDMAY 1517
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQ 510
P +T + + A +G IV GLE+ + Q Q
Sbjct: 1518 KPDVTAIAQLASPAGWKIVKGLEVLVAQGVYQ 1549
>gi|336122553|ref|YP_004577328.1| 3-dehydroquinate dehydratase [Methanothermococcus okinawensis IH1]
gi|334857074|gb|AEH07550.1| 3-dehydroquinate dehydratase [Methanothermococcus okinawensis IH1]
Length = 218
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 129/225 (57%), Gaps = 12/225 (5%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ ++VD+ + KA AD+VE R+D LKN N + +IK + P++ T
Sbjct: 1 MICIPVIDKNVDEALKSAEKA-LKVADIVEFRVDMLKNVNKDD----IIKMAKYPSIITI 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIV 141
R WEGG Y GD N+R+++ + A+E A +IDVEL+ E N + R K K+I+
Sbjct: 56 RADWEGGAYSGDNNKRIELYKTAIENSAKFIDVELK--EEKNKELVKFRNDTNSKTKIII 113
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H+++ TP ++L +V + + DI KFAT A DV + +I + IIG+ M
Sbjct: 114 SHHDFEKTPDYDELLKIVKK-ELEIGDIAKFATMAKSKKDVLNILKIVNEFEGKIIGIGM 172
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
GE G ++RIL FG LTF ++E G SAPGQ + L ++
Sbjct: 173 GEEGKLTRILGVDFGSILTFSSME-GRSSAPGQVDVVKLKKIWEL 216
>gi|148643239|ref|YP_001273752.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
gi|166219474|sp|A5UMF6.1|AROE_METS3 RecName: Full=Shikimate dehydrogenase
gi|148552256|gb|ABQ87384.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
Length = 281
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 148/274 (54%), Gaps = 26/274 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++N AF+ +G + +V V +++ S + GF+
Sbjct: 6 TKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIKGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D +AK IGAVN I ++ + GYNTD +G I AI
Sbjct: 66 TIPHKINVMKYLDKLDPIAKLIGAVNTIDFKE----MKGYNTDGIGCIKAI--------- 112
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHAL 429
G +++ K VV GAGGA +A++ Y A+ + I NR ++A+ LAE + L
Sbjct: 113 ---GEVTSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAEDLKNSKL 169
Query: 430 S-LADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKI 482
+ D ++ + D IL +TT +GM P V++ I K H LV D VY P
Sbjct: 170 TDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVNDIVYNPNE 229
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LL EA ++GAT V G++M + Q E +E +TG
Sbjct: 230 TVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTG 263
>gi|354568130|ref|ZP_08987296.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
gi|353541095|gb|EHC10565.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
Length = 287
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 145/267 (54%), Gaps = 27/267 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG P+ HS SP+++N A +G + V++ + +D+ Q +++ GFS
Sbjct: 6 TKLLGVIGYPIEHSLSPVMHNAAIAQLGIDYVYLPFPIKPEDLHTAIQGFAAIGVVGFSV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A ++ V+ +A+++GAVN +I++ + G NTD G ++ ++ +
Sbjct: 66 TIPHKQAILRSLSAVEPIAQAVGAVNTVIKK--NNSWIGTNTDIEGFLAPLQAHQQN--- 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
+ K+ V++G GGA +A+ G AK A + + R R R+ +++ L
Sbjct: 121 --------WSQKIAVILGNGGAARAVVAGCAKLGCAEIHVVGRNVQRLRDFSQSWENSPL 172
Query: 430 SLA-------DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+ +L P+ + L NTT IGM PK+DE+P+ + + A+ +D +YT
Sbjct: 173 QVNLNVHRWDELPELIPQADL-LVNTTPIGMYPKIDESPLSAAEMANLSSQAIAYDLIYT 231
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
P T+ L++A++ G T + GLEM + Q
Sbjct: 232 PNPTKFLQQAQQIGVTAIDGLEMLVQQ 258
>gi|145577931|gb|ABP82684.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
roskildiensis]
Length = 238
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 145/252 (57%), Gaps = 28/252 (11%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGGHALSLA----DL 434
+++GAGGA +A+ + G R + +ANRT D+A+EL TV ALSL +
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHSVALSLEKATEEQ 168
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
EN++ I+ TT+IGM P+V TP+ +L +V D +Y P T++L EA+E GA
Sbjct: 169 ENYD-----IIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 495 TIVSGLEMFIGQ 506
I +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|398409232|ref|XP_003856081.1| AROM pentafunctional protein, ARO1 [Zymoseptoria tritici IPO323]
gi|339475966|gb|EGP91057.1| AROM pentafunctional protein, ARO1 [Zymoseptoria tritici IPO323]
Length = 1603
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 225/508 (44%), Gaps = 56/508 (11%)
Query: 49 GADLVEIRLDGL-----KNFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+D +E+R+D L + PR + + L S +P +FT R + +GG++ DGD
Sbjct: 1094 GSDAIELRVDLLVDPAASDGLPRPEFLKDQVSLLRASSRLPLIFTLRSVSQGGRFPDGDV 1153
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPS----VE 153
V + R + +G D++D+EL E + + + + C +I S H+ + T S
Sbjct: 1154 ERAVALYREGLRMGFDFVDLELTSPPEVKEYVLNHR-KMCIIIASHHDPKATLSWANGAA 1212
Query: 154 DLSNLVARIQASGADIVKFATTA--LDITDVARVFQITV---HSQVPIIGLVMGERGLIS 208
D L A + G DIVK A D D ++F+ V H P+I + M E G S
Sbjct: 1213 DWKPLFASALSYG-DIVKLVGVAKTTDDNDDLKIFKKWVAKAHPDTPVIAINMAEAGKSS 1271
Query: 209 RILCAKFGGFLTFGTLENGIV-SAPGQ---PTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
R+ F GF+T + + +APGQ I+ +L L ++ + K F I GKPV
Sbjct: 1272 RV----FNGFMTPVSHPAMLAKAAPGQLPAADIRRVLGLMSYIE----PKKFCIFGKPVQ 1323
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
HS+SP L+N F+ G + D A + DF G S TIP K + D
Sbjct: 1324 HSRSPALHNALFQLTGLPHAYGIHETDRAADLVDIIRAPDFGGASVTIPLKLDVMPLLDV 1383
Query: 325 VDTVAKSIGAVNCIIRR--QSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
VD+ AK+IGAVN ++ + GK L G+NTD+ G I ++ + G GV A
Sbjct: 1384 VDSAAKTIGAVNTVVPSLDTATGKTILTGHNTDWQGIILSLRNA--GSKVPGHGVQQA-- 1439
Query: 381 GKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG----HALSLADLE 435
+V+G GG +A Y K G + + + R + L ++ LS D
Sbjct: 1440 ---GMVVGGGGTARAAIYALKNMGYSPIYLVGRNKTKLATLTQSFAQDYNIQLLSSEDEV 1496
Query: 436 NFNPEDGMILANTTSIGMQPKVDE------TPIPKHALGHYALVFDAVYTPKITRLLREA 489
P + + +I +D + K + ++ + Y P +T L+
Sbjct: 1497 KAIPNNKQPVVAVGTIPGDLPIDAGLEAILRSVFKMENDNSKVLLEMAYKPAVTPLVELV 1556
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
G V GLE +GQ Q++ + L
Sbjct: 1557 SSRGWKTVPGLEPLVGQGVHQFKWVSRL 1584
>gi|358057337|dbj|GAA96686.1| hypothetical protein E5Q_03357 [Mixia osmundae IAM 14324]
Length = 1608
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 229/517 (44%), Gaps = 66/517 (12%)
Query: 49 GADLVEIRLDGL-------KNFNPRE-----NIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
G D +E+R+D L K F P + L + + +P +FT R + +GG + D
Sbjct: 1121 GVDAIELRVDLLTGSQAPSKPFVPSTKYVSLQLAQLRRHTSLPIIFTVRTVSQGGFFPDD 1180
Query: 97 ENER-VDVLRLAMELGADYIDVELQVAR-EFNDSIRGKKPEKCKVIVSSHNYQYTPSVED 154
E D+L LA+ +Y+D+E+Q + +R K + ++ S H++ +
Sbjct: 1181 AQEAYFDLLTLAVRQACEYVDLEMQWPTGALSKFVRAK--QSSLILASFHDWSGVHKWKS 1238
Query: 155 LSNLVARIQAS-GADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRIL 211
+ A +AS D+VK A +TD + + F+ S P++ + MG G +SRIL
Sbjct: 1239 TAIDAAYARASLYGDVVKIVLKAQSMTDNSEMLSFRAAHASGKPLLTVNMGTVGQLSRIL 1298
Query: 212 CAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPIL 271
I+ L L Q+ K F ++G+P+ SKSP+L
Sbjct: 1299 NPVLSPVTHPALPAAAAPGQLAVYQIQQALSLIG--QI--SVKRFALLGQPISASKSPLL 1354
Query: 272 YNEAFKSVGFN---GVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
+N F ++G G+ VD+ + F S+DF G S TIPHK A + CDEV
Sbjct: 1355 HNTGFAALGLPHTYGLLETAEVDESVRDF--VRSSDFGGASVTIPHKTAIIALCDEVSEA 1412
Query: 329 AKSIGAVNCI--IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
+ IGA N + ++R S L G NTD+ G +S I +L ++ A +V
Sbjct: 1413 VRIIGACNTLVPVQRGSQIILRGENTDFRGIVSIIA---AEQLAIT-------ADSHALV 1462
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMIL 445
IGAGG +A Y G AR+++ NRT A+ +A ++ P + +
Sbjct: 1463 IGAGGTARAAVYALHQAGFARILLYNRTIANAQVVARSLA-------------PAIKVDI 1509
Query: 446 ANTTSIGMQPKVDETPIPKHALGHY---------ALVFDAVYTPKITRLLREAEE-SGAT 495
++ QP+ + +P + + D YTP+ T LL+ A+
Sbjct: 1510 IDSLQSAGQPQAIVSTVPGSSSIEISSSLFRPGGGIAIDMAYTPRETALLKAAQTFPDWR 1569
Query: 496 IVSGLEMFIGQAYEQYERFTGL--PGKMNAPHLYKFF 530
V G+E+ + Q YEQ+ +TG P + AP + +
Sbjct: 1570 AVPGIEVLLAQGYEQFRLWTGFTAPACLIAPTVLSAY 1606
>gi|239827796|ref|YP_002950420.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
gi|259585283|sp|C5D4W2.1|AROE_GEOSW RecName: Full=Shikimate dehydrogenase
gi|239808089|gb|ACS25154.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
Length = 277
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 147/271 (54%), Gaps = 20/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K++ + G PV HS SPI++N+AF+++ + H+ + + + +G + T
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN I+ R +G+L GYNTD G + A+E+ +NV
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEE----EINV 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
+ K ++IGAGGA + + +GA+ + I NRT +A++L + +V
Sbjct: 117 D------IKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASVSS 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
SL + E E IL NTTS+GM P ++E P+ + +V D +Y P T+ L
Sbjct: 171 VVYSLNEAEERLGEYD-ILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKWL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+EA + I +G+ MF+ Q +E++TG+
Sbjct: 230 KEARKRNGIIQNGVGMFVYQGALAFEKWTGI 260
>gi|114762192|ref|ZP_01441660.1| shikimate 5-dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114545216|gb|EAU48219.1| shikimate 5-dehydrogenase [Roseovarius sp. HTCC2601]
Length = 276
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 252 DTKV--FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAG 307
DT++ G+IG PV HS+SP+L+ K+ G G ++ + + D + F+T F G
Sbjct: 3 DTRIPLAGVIGHPVAHSRSPLLHGHWLKTYGLQGHYIPMDIAPDKLETAFRTLPDLGFVG 62
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ TIPHKE ++ D V A IGA N II R+ DGK+ NTD G I + G G
Sbjct: 63 VNVTIPHKEKVMEIADLVSDRATLIGAANTIIFRK-DGKIHADNTDGYGFIENLRQGAPG 121
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG 426
+G +V+GAGGA +A+ G + I+NRT +RA +L E G
Sbjct: 122 WDPQAGPA---------MVLGAGGAARAVIASLLEVGVPEIRISNRTRNRAEQLREEFGA 172
Query: 427 HALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+ ++ N +D ++ N+TS+GM K E +P L +V D VYTP TRL
Sbjct: 173 RIRVVEWVQAGNAMDDAALVVNSTSLGMVGK-QELRVPLDGLQPGTVVTDLVYTPLETRL 231
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LR A E G T V GL M I QA +ER+ G
Sbjct: 232 LRVAREQGCTCVDGLGMLIHQAVPGFERWFG 262
>gi|50294858|ref|XP_449840.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608179|sp|Q6FIV4.1|ARO1_CANGA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49529154|emb|CAG62820.1| unnamed protein product [Candida glabrata]
Length = 1579
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 233/510 (45%), Gaps = 71/510 (13%)
Query: 44 KANASGADLVEIRLDGLKNFNP---RENIKTLIKESP-VPTLFTYRPIWEGGQYDGDENE 99
KA G D VE+R+D L N + + I L + +P +FT R +GG++ ++ E
Sbjct: 1085 KAITYGCDAVEVRVDHLSNMDEDFVSKQISILRASTDGLPIIFTVRTKKQGGKFPDEDYE 1144
Query: 100 RVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSVEDLS 156
+ L + A+++G DYID+EL + + K K+I S H++ Y +
Sbjct: 1145 TLQKLLITALKVGVDYIDLELTLPIGIQYKVLNMK-RNTKIIGSHHDFASAYPWDHSEWE 1203
Query: 157 NLVARIQASGADIVKFATTALDITDVARVFQIT-VHSQVPIIGLVMGERGLISRILCAKF 215
N + A DIVKF A D + + H+ P+I + MG G +SR+L
Sbjct: 1204 NRYNQALAMDVDIVKFVGMAKSFEDNLMLERFRDSHTTKPLIAINMGAHGRVSRVL---- 1259
Query: 216 GGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGPDTKV-FGIIGKPVGHSKSPILYN 273
LT T E+ V+APGQ T+ ++ +Y +MG TK F ++G P+GHS+SP+L+N
Sbjct: 1260 NTILTPVTSEHLSEVAAPGQLTVAEINRIYT--EMGGITKKDFFVVGSPIGHSRSPVLHN 1317
Query: 274 EAFKSVGFNGVFVHLLV---DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
+ +G F +++ K +N G + TIP K +K DE+ AK
Sbjct: 1318 TGYSVLGLPHHFDKFETTSAEEVKKHLLDNKAN-LGGLAVTIPLKLDIIKYMDELTESAK 1376
Query: 331 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG 390
IGAVN +I + K G NTD++ G+R L VS GV +++G +V+GAG
Sbjct: 1377 VIGAVNTVI-PLGNSKFKGDNTDWL--------GIRNSL-VSNGVPESVSGLSGLVVGAG 1426
Query: 391 GAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILA--- 446
G +A + G ++ I NRT ++ EL + F PE+ I+
Sbjct: 1427 GTSRAAIFALHKLGCQKIFIVNRTTEKLEELVK--------------FFPEEYNIVPIKE 1472
Query: 447 --------NTTSIGMQPKVDETPIPKHAL------------GHY-ALVFDAVYTPKITRL 485
T + + + P+ H+ + + +A Y P +T +
Sbjct: 1473 AEEAEAVNETIGVAVNCVPADKPLDAKLESLLERLLLKSSHTHFVSTLVEAAYKPSVTPV 1532
Query: 486 LREAEES-GATIVSGLEMFIGQAYEQYERF 514
++ A++ +V G +M + Q Q+E +
Sbjct: 1533 MKLAKDKYQWRVVPGAQMLVHQGVAQFETW 1562
>gi|47093352|ref|ZP_00231120.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|417315877|ref|ZP_12102547.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|47018271|gb|EAL09036.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|328465818|gb|EGF37006.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
Length = 289
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HSKSPI+YN +F+ G + ++ ++ +A + + + G +
Sbjct: 9 TRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S + GK +IGAGGA A+ GA+ + I + YD+A++ A ++
Sbjct: 121 -----SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAASIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
H L D E E IL N T +GM P ETPI ++ L+ D
Sbjct: 176 EVPNCIVHIYDLNDTEKLTAEIATSDILVNATLVGMHPNEHETPISDTSVFRKELIVADI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|282898783|ref|ZP_06306770.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281196310|gb|EFA71220.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 30/271 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ + D++ + ++S GF+
Sbjct: 16 TKIMGVIGYPVEHSLSPLMHNAALHHLGLDYVYLPFPIAPDNLQQAIAGFASIGVVGFNV 75
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA++IGAVN +IR + G NTD G I+ ++ +
Sbjct: 76 TIPHKQAIIPLLHEISPVAQAIGAVNTVIR--VGERWIGTNTDVAGFIAPLQTTYNQNWH 133
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K VVIG GGA +A+ G G A + + R ++ ++L ++ L
Sbjct: 134 ----------EKKAVVIGNGGAARAVVAGCIQLGMAEIHLVGRNIEKLKQLEQSWIDSPL 183
Query: 430 -----------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFD 475
S L P+ + L NTT IGM P +DE+P+ + H L +A+ +D
Sbjct: 184 AHELTNKLKTHSWDQLPQLIPQCNL-LVNTTPIGMYPNIDESPVTEDQLHKLPSHAIAYD 242
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQ 506
+YTPK TR L+ A+ GA + GLEM + Q
Sbjct: 243 LIYTPKPTRFLQLAQAQGAIALDGLEMLVQQ 273
>gi|145577957|gb|ABP82697.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
poloniensis]
Length = 238
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 145/248 (58%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG--HALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILCEAKEQGAMIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|452975134|gb|EME74953.1| shikimate 5-dehydrogenase [Bacillus sonorensis L12]
Length = 278
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 142/267 (53%), Gaps = 18/267 (6%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G+IG PV HS SP ++N A K + +G + V DD+ + + GF+ T+
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLDGYYHAFRVENDDLEDAVKGMRALGIQGFNVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A +K D +D A+ +GAVN + R + + L GYNTD G + +++ L
Sbjct: 64 PHKVAIMKYLDRIDESARVLGAVNTVRREKEE--LVGYNTDGEGFLKSLKPSL------- 114
Query: 373 GGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETVGGH--AL 429
++ ++IGAGGA +A+ A + R+ +ANRT ++A + G A+
Sbjct: 115 ---DKPVSELSILIIGAGGAARAIFTTLASERPKRLDVANRTPEKAEAFIQLYSGQTKAV 171
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SLA+ E + E +L TTS+GM P VD+ P+ LV D +Y P T LL+EA
Sbjct: 172 SLAEAEE-HLEAYDVLIQTTSVGMHPHVDDVPLSLARAKETCLVCDIIYNPLKTALLKEA 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
E G ++G+ MFIGQA + +TG
Sbjct: 231 EAKGLHTLNGVGMFIGQAALSFGLWTG 257
>gi|367015874|ref|XP_003682436.1| hypothetical protein TDEL_0F04140 [Torulaspora delbrueckii]
gi|359750098|emb|CCE93225.1| hypothetical protein TDEL_0F04140 [Torulaspora delbrueckii]
Length = 1587
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 238/540 (44%), Gaps = 70/540 (12%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTL----IKES 76
K + +C+ + + K V D+ A G D VE+R+D L + K L
Sbjct: 1073 KRSSFVCLTF--DDLRKKVDDL-PAIVYGCDAVEVRVDHLAKLDADYVSKQLSLLRTATD 1129
Query: 77 PVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
+P +FT R +GG++ D D D+ R A++ G ++ID+EL + + + K
Sbjct: 1130 SLPIIFTIRTKKQGGKFPDEDYQCLEDLFRTALKAGVEFIDLELTLPTQLQYKVLNNKG- 1188
Query: 136 KCKVIVSSHNYQ--YTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-VHS 192
K+I S H++ ++ + N + + D++KF A D + + H
Sbjct: 1189 FTKIIGSHHDFDGAFSWDNAEWENRYNQALSLDVDVIKFVGMAKSFEDNLALERFRGNHK 1248
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
P+I + M E G +SR+L +T L N +APGQ T+ + Y G
Sbjct: 1249 SKPLIAINMSEFGKVSRVLNTVLTP-ITSELLPNA--AAPGQLTLAQINQTYT-SMGGIQ 1304
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD---DIAKFFQTYSSNDFAGFS 309
K F ++GKP+GHS+SPIL+N +K +G F D DI K SN G +
Sbjct: 1305 PKEFYVVGKPIGHSRSPILHNTGYKLLGLPHTFDKYETDLAADIKKELLDGKSN-LGGLA 1363
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIP K +K E+ AK +GAVN + + G NTD++G +A+
Sbjct: 1364 VTIPLKLDIMKYMSELTEAAKLVGAVNTVTPL-GNSNFQGDNTDWLGIRNAL-------- 1414
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA 428
+ GV +LAG +VIGAGG +A Y + G +++ I NRT +
Sbjct: 1415 -IGNGVPESLAGVSGLVIGAGGTSRAAIYALHSLGCSQIFIINRTTSK------------ 1461
Query: 429 LSLADLENFNPED---------GMILANTTSIGMQPKV--DETPIPKHALG--------- 468
LA+L+N PE I A TS+G+ + P+ LG
Sbjct: 1462 --LAELKNSFPESYNVVAIGSASEIEALETSVGVAVNCVPGDKPLDDALLGKLERFLTKA 1519
Query: 469 -HYALV---FDAVYTPKITRLLREAEES-GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
H + + +A Y P +T +++ A + ++ G +M + Q Q++++T L A
Sbjct: 1520 THSSFIPTLLEAAYKPAVTPVMKIAHDKYQWQVIPGSQMLVHQGVAQFQKWTQLKAPFKA 1579
>gi|217963602|ref|YP_002349280.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386009012|ref|YP_005927290.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|386027625|ref|YP_005948401.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217332872|gb|ACK38666.1| shikimate dehydrogenase [Listeria monocytogenes HCC23]
gi|307571822|emb|CAR85001.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|336024206|gb|AEH93343.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 289
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 140/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSPI+YN +F+ G + ++ + +A + + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIRTFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ DGKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S + GK +IGAGGA A+ GA+ + I + YD+A++ ++
Sbjct: 121 -----SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
H L D E N E IL N T +GM P ETPI ++ L V D
Sbjct: 176 EVPHCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVFRKELIVTDI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|320352427|ref|YP_004193766.1| 3-dehydroquinate dehydratase [Desulfobulbus propionicus DSM 2032]
gi|320120929|gb|ADW16475.1| 3-dehydroquinate dehydratase, type I [Desulfobulbus propionicus DSM
2032]
Length = 233
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 109/205 (53%), Gaps = 8/205 (3%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
D+VEIRLDG+++ + I L K P L T RP WEGGQ+ G E ERV++L A+
Sbjct: 33 DVVEIRLDGMRDPQCGQCIAALDK----PVLATNRPAWEGGQWTGSEEERVNLLCAALRW 88
Query: 111 GADYIDVELQVAREFNDS-IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADI 169
GA Y+DVEL A E I+ + KVIVSSH++ TP L + ++ ASGADI
Sbjct: 89 GARYVDVELATASELQAQIIQEAHRHQAKVIVSSHDFDGTPDAAQLHATLQQMMASGADI 148
Query: 170 VKFATTALDITDVARVF---QITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN 226
K TTA+ +V RV Q + P+ MG G ISR GGF+T+ L
Sbjct: 149 GKIVTTAVSAAEVLRVLALQQDALAHDFPLCAFAMGRAGTISRFATLFLGGFMTYAALSE 208
Query: 227 GIVSAPGQPTIKDLLDLYNFRQMGP 251
+APGQ T+ +L L + P
Sbjct: 209 AQATAPGQLTVDNLHRLLSLLDHRP 233
>gi|353240388|emb|CCA72260.1| probable ARO1-Pentafunctional AROM polypeptide [Piriformospora indica
DSM 11827]
Length = 1615
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 231/511 (45%), Gaps = 67/511 (13%)
Query: 48 SGADLVEIRLDGLK--------NFNPRE----NIKTLIKESPVPTLFTYRPIWEGGQY-D 94
+G D VE+R+D L N PRE + L + +P ++T R I +GG + D
Sbjct: 1113 TGIDAVELRVDLLSPHGAAKQPNVPPREYVIQQLAWLKHITNLPVVYTVRTIAQGGAFPD 1172
Query: 95 GDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED 154
E +L L +++G +YIDVE + + +K K+I S H++ D
Sbjct: 1173 KAHEELFALLELGIQMGTEYIDVETTLPHSKIRKLAARK-GASKLIASYHDWS-----GD 1226
Query: 155 LSNLVARIQA------SGADIVKFATTALDITDVARVFQIT-----VHSQVPIIGLVMGE 203
L I+A S DIVK A + + + T + PII + +GE
Sbjct: 1227 LRWFGTEIEAIHTTASSLGDIVKIVGKANSLEENMELRSFTKSVKKANQSKPIIAINLGE 1286
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
+G +SRIL F +T L + +APGQ + + + P K F + G P+
Sbjct: 1287 QGQLSRILNETFTP-VTHSQLP--VAAAPGQLSFSQIQSGLHLLGQLP-AKRFYLFGNPI 1342
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCC 322
S SP L+N F +G + + + + ++ S F G S TIPHK ++
Sbjct: 1343 SKSPSPTLHNSGFHVLGLPHHYELHQTETVDESVRSIIRSPTFGGASVTIPHKLTIMEAL 1402
Query: 323 DEVDTVAKSIGAVNCIIR-RQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379
DE+ AK IGAVN +I Q+DGK L G NTD+ G +++ +S
Sbjct: 1403 DELSPAAKLIGAVNTVIPVEQADGKTILLGDNTDWQGIRNSV---------LSRSACRWT 1453
Query: 380 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH----ALS-LAD 433
A ++IGAGG +A Y G R+++ NRTY A +LA + AL+ L+D
Sbjct: 1454 AQDTGLIIGAGGTARAAVYALNQLGVGRILLWNRTYSSATQLASSFPVEYNITALTDLSD 1513
Query: 434 LENFNPE--DGMILANTTSIG---MQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+ N P G + A+ + G + P++ +V + Y PK+T LL
Sbjct: 1514 ISNVPPSIIIGTVPASAVTEGGVKLAPEM-------FGCRQGGVVVEMAYRPKVTPLLEL 1566
Query: 489 AEESGA--TIVSGLEMFIGQAYEQYERFTGL 517
A ++ + T V G+++ + Q Q+E +T L
Sbjct: 1567 ASKASSKWTQVYGVDVLLEQGLRQFELWTTL 1597
>gi|358380070|gb|EHK17749.1| hypothetical protein TRIVIDRAFT_43497 [Trichoderma virens Gv29-8]
Length = 1569
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 231/511 (45%), Gaps = 53/511 (10%)
Query: 40 VDMGKANASGADLVEIRLDGLKNFNPRENIK--TLIKE-SPVPTLFTYRPIWEGGQYDGD 96
VD+ + D VE+R+D L++ P+ +K +L++ + P +FT R +GG++ D
Sbjct: 1064 VDILPRVTADCDAVELRVDLLQDQQPQAVMKQVSLLRHVTGKPIIFTVRSESQGGKFPDD 1123
Query: 97 ENE-RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
N+ R + RLA+ +G +YID+E+ ++ E +R + +I S H+ S ++
Sbjct: 1124 NNDLRRALYRLALRMGVEYIDLEVTLSDEIIQEVRDSRGHTV-IITSHHDPAGALSWKNA 1182
Query: 156 SNLVARIQA-SGADIVKFATTALDITD---VARVFQITVHSQ-VPIIGLVMGERGLISRI 210
S + A +A D++K TA + D + R + +Q PII L MG G +SR+
Sbjct: 1183 SWVSAYNRALQYGDVIKLVGTARTVEDNFDLIRFKSRMLAAQPTPIIALNMGSAGKLSRV 1242
Query: 211 LCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKS 268
L GFLT +APGQ + ++ L ++ P F + GKP+ S+S
Sbjct: 1243 L----NGFLTPVSHPALPFKAAPGQLSAAEIRQGLALLGEIEPQN--FYLFGKPISKSRS 1296
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
P L+N F VG + L D + + S DF G S TIP K+ + D++
Sbjct: 1297 PALHNALFGQVGLPHEYQRLETDKVEDVLEVLRSADFGGASVTIPLKQDIMPHLDDLTDA 1356
Query: 329 AKSIGAVNCII---RRQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
K IGAVN ++ +DG +L G NTD+ G + + GV +
Sbjct: 1357 VKIIGAVNTVVPTTDNSADGRKRLTGDNTDWKGMVYVLR---------KAGVKAQDGNAS 1407
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH-----ALSLADLENF 437
VIGAGG +A + + G + + + R + LA + S AD E
Sbjct: 1408 AAVIGAGGTSRAAIFALHSLGFSPIYLVGRDAKKVESLASSFPAEYGVQPVASTADAEQL 1467
Query: 438 N----------PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
P D + + I + TP A ++ + Y P T +++
Sbjct: 1468 ASKPVVSISTIPADKPLDSGVEEI-LGAVFKSTP---AAQNESRVLLEMAYHPPRTPVIQ 1523
Query: 488 EAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
AE +G T +SGLE+ Q + Q+E +TG+
Sbjct: 1524 IAESAGNWTTISGLEVLAAQGWYQFETWTGI 1554
>gi|398818042|ref|ZP_10576641.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
gi|398028840|gb|EJL22343.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
Length = 283
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 148/280 (52%), Gaps = 38/280 (13%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ G PV HS+SP+++N AF G + V+ ++ + G +
Sbjct: 6 TKLVGLFGHPVSHSQSPMMHNTAFSETGLGFAYAAFDVEPENLEDAVAGIRALGLKGINV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK A + DE+D +AK IGAVN ++ R DG+L GYNTD +G + ++ E G+
Sbjct: 66 TIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSLVEETGI--- 120
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG- 426
L ++ ++GAGGA +A+A+ +G R + I NR+ +RA LAE VG
Sbjct: 121 ---------VLEKQVVTMVGAGGAARAVAFTLAEQGVREIRIINRSRERAAVLAEHVGTI 171
Query: 427 ----------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA 476
A ++AD +L NTTSIGM P V ETP+P L V D
Sbjct: 172 VPTKIVEQGEGAAAIAD--------SSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDL 223
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y P TRLL+EA GAT+ SG+ MF+ Q +E +TG
Sbjct: 224 IYNPLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTG 263
>gi|144899674|emb|CAM76538.1| Quinate/Shikimate 5-dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 144/269 (53%), Gaps = 18/269 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
K+ G++G PVGHS+SP L+ + +G +G +V L V +D A F+ FAG +
Sbjct: 7 AKLAGVLGWPVGHSRSPRLHGYWLERLGIDGAYVPLPVRPEDFASVFRALPKMGFAGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKE A+ DEV+ +AK IGAVN ++ R+ DG + G NTD G + + +
Sbjct: 67 TVPHKEQALILADEVEPLAKRIGAVNTLVVRE-DGSILGLNTDAFGFMQNLLE------- 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
+ S + VV+GAGGA +A+ G + + NR+ +RA +LA +GG +
Sbjct: 119 -THPASLGYLNRPAVVLGAGGAARAVIAALADAGVPEIRLVNRSLERAEKLAAEIGG-PI 176
Query: 430 SLADLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+ + + +L NTTS+GM QP +D + AL A+V D VY P++T LL
Sbjct: 177 RVQQWDRLDLAGAGLLVNTTSLGMTGQPPLD---LDLSALPQDAVVNDIVYAPRVTDLLL 233
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
A+ G +V GL M + QA + + G
Sbjct: 234 RAQARGNPVVDGLGMLLWQAVRGFSLWFG 262
>gi|83814489|ref|YP_446381.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294508318|ref|YP_003572376.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
gi|123528180|sp|Q2S0A0.1|AROE_SALRD RecName: Full=Shikimate dehydrogenase
gi|83755883|gb|ABC43996.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294344646|emb|CBH25424.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
Length = 285
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 145/280 (51%), Gaps = 26/280 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ ++G PV HS SP ++N AF++ N +V V + + + F G +
Sbjct: 7 TQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFLGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T PHKEA + DEV A+++GAVN I+R G+L G NTD G + +E+ RG
Sbjct: 67 TTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLEE--RG--- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG--AKAKGARVVIANRTYDRARELAETVGGH- 427
AL G +V GAGGA +A+ YG + + R+ I R D+A LA + H
Sbjct: 120 -----GDALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAADLAAHD 174
Query: 428 ---ALSLADLEN--FNPEDGMILANTTSIGMQP-KVDETPIPKHA-LGHYALVFDAVYTP 480
AL ++ E + ++ N T +GM P + +TP P +V+D VYTP
Sbjct: 175 PDGALRVSSFEEAALSVRTSRLVVNATPLGMAPDRRGQTPWPNPVDFTADHVVYDLVYTP 234
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFT--GLP 518
+ TRLLREA GAT + GL+M + QA Y ++T G+P
Sbjct: 235 EETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWTDRGMP 274
>gi|304314453|ref|YP_003849600.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
gi|302587912|gb|ADL58287.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 297
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 152/278 (54%), Gaps = 32/278 (11%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFS 309
+T++ GIIG P+ HS SP ++N AFK++G + +V V + + + + + G +
Sbjct: 20 NTQLTGIIGYPLTHSLSPQMHNAAFKALGMDWAYVPFPVKPSGLEEAVRGLRALNVRGVN 79
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKE+ ++ EVD A IGAVN + + D + GYNTD G + A+E+
Sbjct: 80 VTIPHKESVLEYIGEVDETASLIGAVNTL--KFEDETIMGYNTDASGCLRALEE------ 131
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV----- 424
+++ G +++GAGGA +A A+ +GA V I NRT +RAR LAE +
Sbjct: 132 ------VTSVDGSSVIILGAGGAARACAFQLAVRGASVTILNRTPERARALAEDIKGALD 185
Query: 425 -----GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVY 478
GG+ L A +E + IL +TT +GM P +D+ P+ K L H L V+D VY
Sbjct: 186 IRVKYGGYELIPACVEGAD-----ILIDTTPVGMYPHMDDEPLVKAELMHEGLVVYDLVY 240
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T LLREA +GA VSGL M + Q E + ++G
Sbjct: 241 NPPETCLLREARAAGAVPVSGLRMLLYQGAEAFRIWSG 278
>gi|145577893|gb|ABP82665.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
gi|145577895|gb|ABP82666.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 146/252 (57%), Gaps = 28/252 (11%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGGHALSLA----DL 434
+++GAGGA +A+ + G + + +ANRT D+A+EL TV ALSL +
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATEEQ 168
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L EA+E GA
Sbjct: 169 ENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 495 TIVSGLEMFIGQ 506
I +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|148555739|ref|YP_001263321.1| shikimate dehydrogenase [Sphingomonas wittichii RW1]
gi|148500929|gb|ABQ69183.1| shikimate dehydrogenase [Sphingomonas wittichii RW1]
Length = 289
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 142/283 (50%), Gaps = 34/283 (12%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSND-FAGFSCTIPH 314
+IG P+GHSKSP ++ G + H+ +D+ +F+ + + G + TIPH
Sbjct: 14 VIGDPIGHSKSPTIHKFWLDRAGIPADYRAAHVKPEDLWIYFEERRRDPAWRGCNVTIPH 73
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K+A +K D +D A+ IGAVN ++ DGKL GYNTDY G + I L
Sbjct: 74 KQAVMKLVDRIDPAAERIGAVNTVM--PEDGKLVGYNTDYAGFLEPIRPLL--------- 122
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
+ ++ V G GGA KA+ G +V+A R D+AR L E +A +
Sbjct: 123 -AQQHLFRMARVFGTGGAAKAVVLALHDHGFTIVVAARDLDKARALREAFEPDERLIAPI 181
Query: 435 ENF-NPED-------GMI--LANTTSIGM--QPKV--DETPIPKHALGHYALVFDAVYTP 480
E F +P D G++ + NTTS+GM QP + D + +P A+ ++D VY P
Sbjct: 182 EIFADPTDFPFDDREGILDLVVNTTSLGMNGQPPLALDFSHVPPDAV-----IYDIVYAP 236
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T LL EA+ G + GL M IGQA +ERF G P +A
Sbjct: 237 LETPLLAEAKRHGLRTIDGLHMLIGQAAAAFERFYGRPAPRDA 279
>gi|188997216|ref|YP_001931467.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932283|gb|ACD66913.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 279
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 147/283 (51%), Gaps = 31/283 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T V+GI G PV HSKSP AF+ +G N V+V V +DI K ++ D G +
Sbjct: 6 NTLVYGIFGYPVKHSKSPTFQTAAFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIKGVN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKE + +E+ K I AVN I + DG L GYNTD+ G I +++
Sbjct: 66 VTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDWYGFIEGLKE------ 117
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-- 426
+ +AGK +VIGAGG+ +A+ YG +GA ++ +ANRT RA L E
Sbjct: 118 -----IMPDIAGKRVLVIGAGGSSRAIIYGLLNQGAGKIYLANRTIQRAENLIEDFSNFY 172
Query: 427 -------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA-LVFDAVY 478
+SL ++ E +I+ NTTS+G+ D+ I + L + + V D +Y
Sbjct: 173 RIVKMIIKPISLEEINRILNEVELIV-NTTSVGLNE--DDPEIFDYNLINSSHTVVDIIY 229
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKM 521
K T+LLR+A+E A +G M I Q + +E +TG P +
Sbjct: 230 --KETKLLRKAKEKNAKYQNGYPMLIYQGAKSFEIWTGKPAPI 270
>gi|328950649|ref|YP_004367984.1| shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450973|gb|AEB11874.1| Shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 270
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 137/264 (51%), Gaps = 19/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 313
G+IG P+ HS SP ++ A ++ G G++ L D++ + G + T+P
Sbjct: 3 LGLIGYPLAHSVSPAMHRAALQAAGLEGIYRLLETPPDELESRVMEVRRG-YRGVNVTVP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HK A + DEV ++IGAVN I+ +G+L G+NTD G A+E +
Sbjct: 62 HKVAVLPYLDEVSPEVQAIGAVNTIV--NEEGRLVGHNTDAPGFTRALE---------AA 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
GV++ G VV+GAGGA +A+ Y GARV +ANRT+ RA+ LAE G A+
Sbjct: 111 GVTAR--GLRAVVLGAGGAARAVVYALVQAGARVRVANRTFARAKALAEVFGAEAVPFEG 168
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + +L N TS+G+ +PIP+ A+V D VY P TRLLREA +
Sbjct: 169 PEFVRAVREADLLVNATSVGLN-DPGASPIPEGVWPREAVV-DIVYNPLETRLLREARAA 226
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G V GL M + Q +E +TG
Sbjct: 227 GLVAVDGLGMLVWQGALAFELWTG 250
>gi|15613887|ref|NP_242190.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
gi|20137510|sp|Q9KD93.1|AROE_BACHD RecName: Full=Shikimate dehydrogenase
gi|10173940|dbj|BAB05043.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
Length = 278
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 21/272 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K+FG++G PVGHS SP+++N+ F+ + F+G + V+ + K + + GF+ T
Sbjct: 3 KLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK + D VD A+ IGAVN ++ + DG+LFG NTD G + ++ D
Sbjct: 63 IPHKVTIMDYLDMVDEEAQEIGAVNTVVMK--DGQLFGSNTDGQGYLESLMDV------- 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELA-----ETVG 425
V++ + ++IGAGGA +A+ K + R + IANRT +A E +
Sbjct: 114 ---VTTPFPTQDVLIIGAGGAARAIGTVLKREKVRSITIANRTLAKAEEFSGVLESSETS 170
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
ALSL + E E ++ NTTS+GM P+VD+ P+ L +V D +Y P T+
Sbjct: 171 CSALSLKEAEQ-QLERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVSDLIYNPLETKF 229
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LREA++ GA V GL MF+ Q +E +TGL
Sbjct: 230 LREAKQKGAKTVDGLGMFVNQGALAFELWTGL 261
>gi|312137431|ref|YP_004004768.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
gi|311225150|gb|ADP78006.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
Length = 281
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 159/281 (56%), Gaps = 27/281 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SP+++N AF+ G + V+V H+ +++ + + + G +
Sbjct: 6 TKVVGVIGDPVEHSLSPVMHNAAFEYYGLDYVYVPFHVKKENLKDAIKGSKALNIKGLNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D +D AK IGA+N I + + DG + G+NTD GA+ A+++
Sbjct: 66 TIPHKRNVIKYLDWIDDAAKLIGAINTI-KFEDDG-IKGFNTDGKGAVMALKE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG---G 426
+ + K +++GAGGA +A+A+ +GA+ + I NRT ++A ELA+ + G
Sbjct: 117 -----VTEIKNKKILILGAGGAARAVAFQLALEGAKNICILNRTVEKAEELAKDINKKTG 171
Query: 427 HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKIT 483
+ LE E D IL + T +GM P V++ P+ K + H L+ D VY P T
Sbjct: 172 VKTNSGSLELIEKEIKDTDILIDATPVGMYPNVNQEPLVKAEMMHENLIVNDLVYNPIKT 231
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP 524
LL+EAE++GA +SG+EM + Q E ++ +TG M AP
Sbjct: 232 TLLKEAEKAGAKTISGVEMLVYQGAEAFKIWTG----MEAP 268
>gi|302674061|ref|XP_003026716.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
gi|300100400|gb|EFI91813.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
Length = 1635
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 227/512 (44%), Gaps = 70/512 (13%)
Query: 48 SGADLVEIRLDGLKN--------FNP-----RENIKTLIKESPVPTLFTYRPIWEGGQYD 94
+G D VE+R+D L++ + P R+ + L + + +P ++T R +GG +
Sbjct: 1131 AGVDAVELRVDLLRSPQGGSAGVYIPPAAYVRDQVALLRRATNLPIVYTVRTKAQGGAFP 1190
Query: 95 GDENERVDVLRLAMEL-GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVE 153
D++ L G +YIDVE+ + + + K ++I S H++ +
Sbjct: 1191 DDQSAAAAALLDLALRLGVEYIDVEISLPSDHIHQLV-KNKGYAQLIASWHDWTGAMRWD 1249
Query: 154 DLSNLVARIQASG-ADIVKFATTA------LDITDVARVFQITVHSQVPIIGLVMGERGL 206
QA+ DIVK A L + D AR H + P+I L MGE G
Sbjct: 1250 GADVAAKYAQAATFGDIVKIVGKANALEDNLALLDFARA-----HDRKPLIALNMGEAGQ 1304
Query: 207 ISRIL--CAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264
+SR+L C F+ + +APGQ + + + P K F + G P+
Sbjct: 1305 MSRVLGTC-----FVPVSHPKLPFKAAPGQLSFAQIQQALHLLGALP-AKKFYLFGTPIA 1358
Query: 265 HSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEAAVKCCD 323
HS SP L+N F ++G + L + + S+ DF G S TIP K + D
Sbjct: 1359 HSMSPTLHNTGFAALGLPHTYSLLETSTVGDEIKAAVSAPDFGGASVTIPFKLDVIPLLD 1418
Query: 324 EVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
E+ AK IGAVN II Q D K L G NTD +G +A+ L G V SAL
Sbjct: 1419 ELSDAAKVIGAVNTIIPIQRDSKRILRGDNTDCLGIQAAVTSRLAG-----ARVGSAL-- 1471
Query: 382 KLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRAREL-AETVGGHALSLADLENF-- 437
V+GAGG +A Y A GA + + NRT +A EL A L L L+ +
Sbjct: 1472 ----VLGAGGTARAAIYALHALGASPIYLFNRTRSKAEELHAAFPNAPVLVLDKLDAWGE 1527
Query: 438 -NPEDGMIL------ANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYTPKITRLLR 487
P +I+ A TT G + +P+ L H A+V D Y P T LL+
Sbjct: 1528 NTPAPNVIVSCVPAAATTTEAGSE----GLHLPQGLLAHQNGPAVVVDMAYKPAETPLLQ 1583
Query: 488 EAEESGA---TIVSGLEMFIGQAYEQYERFTG 516
A+ G + V G+E+ + Q + Q+E +TG
Sbjct: 1584 LAKAVGGEHWSTVPGVEVLLEQGFVQFELWTG 1615
>gi|255941492|ref|XP_002561515.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|327507668|sp|B6HAA7.1|ARO1_PENCW RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|211586138|emb|CAP93886.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1586
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 238/521 (45%), Gaps = 80/521 (15%)
Query: 49 GADLVEIRLDGLKNFNP------------RENIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
G+D VE+R+D LK+ P E + L + + +P +FT R +GG++ D
Sbjct: 1075 GSDAVELRVDLLKD--PAVDGDIPSIDYVNEQMSLLRRRTTLPVIFTIRTKSQGGRFPDD 1132
Query: 97 ENER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYTPSV 152
++ + + RLA G +++D+E+ F D++ E K+I S H+ + T S
Sbjct: 1133 AHDAAMQLYRLAFRCGCEFVDLEIA----FPDAMLRAVTEMKGYSKIIASHHDPKGTLSW 1188
Query: 153 EDLSNLVARIQA-SGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLI 207
++S + + +A D++K A LD + R F+ VP+I + MG+ G +
Sbjct: 1189 ANMSWIPSYNRALEYGDVIKLVGVANTLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQL 1248
Query: 208 SRILCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGH 265
SRIL GF+T + + +APGQ + ++ MG + F I G PV
Sbjct: 1249 SRIL----NGFMTPVSHPSLPFKAAPGQLSAAEIR--RGLSLMGEIKAQKFAIFGSPVSG 1302
Query: 266 SKSPILYNEAFKSVGFNGVFVHL---LVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
S+SP L+N F +G + L V+D+ F + + DF G S TIP K +
Sbjct: 1303 SRSPALHNTLFAKMGLPHDYSRLETTKVEDVKDFIR---APDFGGASVTIPLKLDIMPLL 1359
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
DEV A+ IGAVN I+ R S+G +L GYNTD+ G I + + GV +
Sbjct: 1360 DEVAQEAEIIGAVNTIV-RVSNGNNPPRLIGYNTDWQGMIRCMRN---------AGVYGS 1409
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF 437
+ VVIG GG +A + G + + + RT + + T + ++ ++N
Sbjct: 1410 TGSQSAVVIGGGGTARAAIFALHNMGFSPIYVVGRTASKLESMVSTFPTN-YNIRVVDNR 1468
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGH---------------------YALVFDA 476
D + +I +D P+ + L H + ++ +
Sbjct: 1469 AQLDTVPQVAIGTIPADRPID--PVMRETLCHMFERAQEIDGTLIGKSSDTSKHRVLLEM 1526
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A ++G + + GLE+ +GQ Q+ +TG+
Sbjct: 1527 AYKPAVTALMQLASDAGWSTIPGLEVLVGQGVHQFVHWTGI 1567
>gi|387929812|ref|ZP_10132489.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
gi|387586630|gb|EIJ78954.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
Length = 277
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+ HS SP+++N+ FK G + + H+ D+ Q + + +GF+ T
Sbjct: 3 KLYGVIGDPISHSMSPVMHNDLFKVYGIDAHYHPFHVKRGDLEAAVQGLKAINCSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + D++D +A++IGAVN ++ + G+L G+NTD G + +GL+ V
Sbjct: 63 VPHKTEIMNFLDDIDPLAEAIGAVNTVVNK--GGRLIGFNTDGRGFL----EGLKRNFAV 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGG 426
L ++IGAGGA KA+ Y G + + NRT ++A +L E +V
Sbjct: 117 -------LDSTRVLIIGAGGAAKAIYYTMAHAGVKHIDFCNRTAEKAAQLIEACPFSVQS 169
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ EN +I+ TTS+GM P ++ +P+ LG A V D +Y P T +L
Sbjct: 170 NIYPREKAENRLSNYNLII-QTTSVGMSPNINASPLSLENLGIGAFVSDIIYNPLETVIL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
R+A+ GA +GL+MF+ Q +E++TG+
Sbjct: 229 RDAKRRGAGTQNGLDMFVFQGAFAFEKWTGI 259
>gi|270307833|ref|YP_003329891.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
gi|270153725|gb|ACZ61563.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
Length = 286
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 25/275 (9%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGF 308
PD +FGIIG PV HS SP + N AFK N +++ + +D+ + + G
Sbjct: 5 PDA-LFGIIGYPVSHSISPAMQNAAFKYCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGL 63
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
+ TIPHK +K D +D AK IGAVN I+ +G L GYNTD+ G + +E R
Sbjct: 64 NVTIPHKIEVIKYIDVLDPAAKKIGAVNTIV--NENGVLKGYNTDFGGFVRLLE---HNR 118
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---- 424
+ A A F ++GAGG+ A+A G R+ + R ++A++LA +
Sbjct: 119 I--------APAKHCFALLGAGGSAHAIALAICTLGGRLTVLARQEEKAKDLASKMCLRF 170
Query: 425 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
G A L +L + N E+ + I+ N T +GM ++ +P L V DA+Y P
Sbjct: 171 NGKAQGL-ELNDTNLEEVLAETDIIVNCTPVGMGNLAGQSLVPARFLRPDLTVIDAIYNP 229
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
TRLL+EAE GA I++GLEM + Q +E +T
Sbjct: 230 CKTRLLKEAENKGAKIINGLEMLVWQGAMSFEIWT 264
>gi|350266770|ref|YP_004878077.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599657|gb|AEP87445.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 280
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 20/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG P+GHS SP ++N + K + +G + V DD+ + + G + T
Sbjct: 3 KLFGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ A+ + I NRT ++A++L E+
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIARNVPKKFDICNRTLEKAKQLTESTPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ PI A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPISLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+EA + G + G+ MF+ QA ++ +TGL
Sbjct: 230 KEAHQKGLKTLDGVGMFVEQAALSFQLWTGL 260
>gi|86136752|ref|ZP_01055330.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
gi|85826076|gb|EAQ46273.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
Length = 277
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 140/267 (52%), Gaps = 21/267 (7%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG PV HSKSP L K+ G G +V H+ +D+ +T F G + TIPH
Sbjct: 10 GVIGCPVAHSKSPQLQTHWLKTHGIAGHYVPMHVEPEDLETVIRTLPKAGFVGVNVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA +K D+V AK +GA N II R SDG + NTD G I+ ++ G + SG
Sbjct: 70 KEAVMKIADKVTDRAKLMGAANTIIFR-SDGSILADNTDGYGFITNLQQGAPDWVPTSGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD 433
+ V+GAGGA +A+ G +++ NRT +RA +L G + + D
Sbjct: 129 AA---------VLGAGGACRAVVASLIEAGVPEILLTNRTRERAEQLHSDFGKR-IQVVD 178
Query: 434 --LENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
L ED ++ NTTS+GM +P++ +P L +V D +Y+P T LL+ A
Sbjct: 179 WVLAGNIIEDAALVVNTTSLGMVGKPRLR---VPLDGLKPNMVVTDLIYSPLKTNLLQTA 235
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
EE G T+V GL M + QA +ER+ G
Sbjct: 236 EEMGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|289432356|ref|YP_003462229.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452203313|ref|YP_007483446.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
gi|288946076|gb|ADC73773.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452110372|gb|AGG06104.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
Length = 286
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
Q PD +FGIIG PV HS SP + N AFK N +++ + +D+ + +
Sbjct: 2 QTIPDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNI 60
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHK +K D +D AK IGAVN I+ +G+L GYNTD+ G + +E
Sbjct: 61 RGLNVTIPHKIEVIKYIDTLDPAAKKIGAVNTIV--NENGQLKGYNTDFGGFVRLLE--- 115
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV- 424
R+ A A F ++GAGG+ A++ G + + R ++A++LA +
Sbjct: 116 HNRI--------APAKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMC 167
Query: 425 -------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G L+ A+LE E +I+ N T IGM ++ IP L V DA+
Sbjct: 168 LRFKGKAQGLELNEANLEETLAESNIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAI 226
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P TRLL +AE+ GA I++GLEM + Q +E +T
Sbjct: 227 YNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWT 264
>gi|433545542|ref|ZP_20501895.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
gi|432183197|gb|ELK40745.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
Length = 283
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 151/273 (55%), Gaps = 24/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T++ G+ G PV HS+SP+++N AF G + + V+ + + G +
Sbjct: 6 TQLVGLFGHPVSHSQSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLRGINV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK A + DE+D +AK IGAVN ++ + DG+L GYNTD +G + ++ E G+
Sbjct: 66 TIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSLVEETGI--- 120
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH 427
L ++ ++GAGGA +A+A+ KG + + I NR+ +RA LAE VG
Sbjct: 121 ---------VLDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEHVGT- 170
Query: 428 ALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
+ +E +D + +L NTTSIGM P V +TP+P L +V D +Y P T
Sbjct: 171 IVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYNPLET 230
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
RLLREA+ GAT+ SG+ MF+ Q +E +TG
Sbjct: 231 RLLREAQAIGATVHSGVGMFVNQGALAFELWTG 263
>gi|229918236|ref|YP_002886882.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
gi|259585281|sp|C4L3U2.1|AROE_EXISA RecName: Full=Shikimate dehydrogenase
gi|229469665|gb|ACQ71437.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
Length = 261
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 136/264 (51%), Gaps = 24/264 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
+IG P+ HS SP L+ + ++ G G + + D + F D+ GF+ TIP
Sbjct: 3 LAVIGHPIAHSLSPQLHEQWLRASGLFGRYEAIDATPDQLPALFAAMREGDWDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE V+ D++D AK GAVN + +R DG+L G NTD G + A+ R +V
Sbjct: 63 YKEVVVRYLDDLDEAAKHAGAVNTVYKR--DGRLIGTNTDGAGLVQALMPYTDFRGHV-- 118
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
+++GAGGA + + + V I NRT +RA+ LA+T G +
Sbjct: 119 -----------LIVGAGGAARGIVQALPTRD--VTIVNRTVERAKALADTFG---VVYTT 162
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
+ + ++ TTS+GM + TP+ L +V D +Y P +T +L+EA+ G
Sbjct: 163 FDEMDVSRYDVIIQTTSVGMDER--STPLSLEGLRQNTVVCDIIYRPLVTPMLQEAKSRG 220
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
A IV+G+ MF+GQ +E++TG+
Sbjct: 221 ANIVTGVAMFVGQGALSFEKWTGV 244
>gi|223044396|ref|ZP_03614430.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
gi|222442265|gb|EEE48376.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
Length = 269
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SPI+++ F ++ N + + + +D+ + +GF+ TIP
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DEVD +K++GAVN ++ R DGK GYNTD +G ++ ++
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ L +++GAGGA K +A K ++ IANRT R + + +A+SL
Sbjct: 111 -IYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAISLN 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM K +++ I L + LV D VY P T +L EAE
Sbjct: 168 DAEKYLDEFDIVI-NTTPAGMD-KNNDSVINLRNLSPHTLVSDIVYIPYKTPILLEAESK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|314933766|ref|ZP_07841131.1| shikimate dehydrogenase [Staphylococcus caprae C87]
gi|313653916|gb|EFS17673.1| shikimate dehydrogenase [Staphylococcus caprae C87]
Length = 269
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SPI+++ F ++ N + + + +D+ + +GF+ TIP
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFLLLRDIITEKKLSGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DEVD +K++GAVN ++ R DGK GYNTD +G ++ ++
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ L +++GAGGA K +A K ++ IANRT R + + +A+SL
Sbjct: 111 -IYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAISLN 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM K +++ I L + LV D VY P T +L EAE
Sbjct: 168 DAEKYLDEFDIVI-NTTPAGMD-KNNDSVINLRNLSPHTLVSDIVYIPYKTPILLEAESK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|172056803|ref|YP_001813263.1| shikimate 5-dehydrogenase [Exiguobacterium sibiricum 255-15]
gi|259585280|sp|B1YKR3.1|AROE_EXIS2 RecName: Full=Shikimate dehydrogenase
gi|171989324|gb|ACB60246.1| shikimate 5-dehydrogenase [Exiguobacterium sibiricum 255-15]
Length = 261
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 131/264 (49%), Gaps = 27/264 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+L+ K+ G G + L V D + F Q F G + TIP
Sbjct: 3 FAVIGHPIAHSLSPMLHETWLKAAGLFGCYTTLDVEGDGLEAFVQKVRKRQFDGINVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK-LFGYNTDYVGAISAIEDGLRGRLNVS 372
HK A + D ++ A GAVN + DG+ L G NTD G A+
Sbjct: 63 HKSAIIPFLDRLEPAAARAGAVNTVYW---DGEELVGANTDGTGFARAL----------- 108
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
++ K +VIGAGGA + + V + NRT A ++A G A+ +
Sbjct: 109 ---ATWTNAKNSLVIGAGGAARGII---PMLPGHVTVMNRTNQTAEQVAAEFGQSAVPWS 162
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+ P D ++ NTTS+GM P +D+TPI A AL+ D +Y P TRLLREA +
Sbjct: 163 RTLDLTPYD--VIINTTSVGMAPAIDQTPIELTAT--TALICDIIYRPTPTRLLREATAN 218
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G + G+ MF+ QA E +ERFTG
Sbjct: 219 GLDTLDGVLMFVLQAAEAFERFTG 242
>gi|88602321|ref|YP_502499.1| shikimate 5-dehydrogenase [Methanospirillum hungatei JF-1]
gi|88187783|gb|ABD40780.1| shikimate dehydrogenase [Methanospirillum hungatei JF-1]
Length = 454
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 133/266 (50%), Gaps = 21/266 (7%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCT 311
D ++GI+G P HSKSP +YN F G + D +F G S T
Sbjct: 198 DIFLYGILGYPCMHSKSPGIYNHLFADYGMPAHYTWFEHKDPGRFLSLLPGTGVRGLSVT 257
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKE + DE+ A+SIGAVN I+ + D K +G+NTD+ G +E
Sbjct: 258 IPHKETVIPYLDEIKHDAESIGAVNTILIQ--DDKKYGFNTDWKGIYRPLE--------- 306
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
G V++GAGGA A Y +G VI NRT +RA LA G +L
Sbjct: 307 ------GTHGDTAVILGAGGAAAAAVYAVSMRGFTPVILNRTPERAEHLARKSGAEIGTL 360
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
AD+ ++P+ +L N T IGM TPIP AL VFD VYTP+ T LL+ A
Sbjct: 361 ADIGKYHPD---LLINATPIGMGSD-PHTPIPPSALEPGMKVFDLVYTPRDTPLLQAALA 416
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
SG +++ G EMFI Q EQ+ TG+
Sbjct: 417 SGCSVIPGTEMFIHQLAEQFRILTGI 442
>gi|288560500|ref|YP_003423986.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
gi|288543210|gb|ADC47094.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
Length = 298
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 143/283 (50%), Gaps = 31/283 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG P+ H+ SP + N +++ N +++ H+ D++ + + G +
Sbjct: 6 TKILGVIGDPIEHTFSPAMQNAGLEALNLNYIYLPFHVKSDNLNSAIEGAKTLGIRGLNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRG 367
TIPHK + C DEVD +A IGAVN I + + GYNTD G + AIE+
Sbjct: 66 TIPHKREVITCLDEVDPIANMIGAVNTIKFDYDENEGISTKGYNTDAYGCLRAIEE---- 121
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG 426
+++ K ++GAGGA +A+A+ A + + I NR +++A LA +
Sbjct: 122 --------KASVKDKKITIVGAGGASRAIAFQMASSDIGELSILNRNFNKAESLANDIKS 173
Query: 427 HALSLADLENFN------------PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+ L D N N ++ IL +TT IGM P +++ PI + H L+
Sbjct: 174 NLKQLNDNFNLNINAYDMDSLKREIQESEILIDTTPIGMYPNINDKPIASADMMHDDLIV 233
Query: 475 -DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D VYTP T L++EA+++ A +V G +M + Q +E + G
Sbjct: 234 NDIVYTPMETSLIKEAKKANAEVVYGYKMLLYQGIRSFEIWLG 276
>gi|226311576|ref|YP_002771470.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|254806733|sp|C0ZB07.1|AROE_BREBN RecName: Full=Shikimate dehydrogenase
gi|226094524|dbj|BAH42966.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 283
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 148/273 (54%), Gaps = 24/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T++ G+ G PV HS+SP+++N AF G + V+ ++ + G +
Sbjct: 6 TQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLKGINV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK A + DE+D +AK IGAVN ++ R DG+L GYNTD +G + ++ E G+
Sbjct: 66 TIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSLVEETGI--- 120
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH 427
L ++ ++GAGGA +A+A+ +G + + I NR+ +RA LAE VG
Sbjct: 121 ---------VLEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEHVG-M 170
Query: 428 ALSLADLENFNPE----DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
+ +E E D +L NTTSIGM P V ETP+P L V D +Y P T
Sbjct: 171 IVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYNPLET 230
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
RLL+EA GAT+ SG+ MF+ Q +E +TG
Sbjct: 231 RLLKEARAIGATVHSGIGMFVNQGALAFELWTG 263
>gi|449123706|ref|ZP_21760028.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
gi|448943959|gb|EMB24841.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
Length = 493
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 230/522 (44%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + AD YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P +D P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|397690320|ref|YP_006527574.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
gi|395811812|gb|AFN74561.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
Length = 293
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 146/297 (49%), Gaps = 42/297 (14%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV------HLLVDDIAKFFQTYSSNDF 305
+TK+ GIIG P+ HS SP+++N AF+ N +++ LL D +
Sbjct: 10 NTKIIGIIGHPIKHSFSPLMHNLAFELTKLNYIYLPFDVPPTLLKDSLKGMIAL----GI 65
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GF+ TIP KE + ++ A IGAVN I+ +G L GYNTD +G I ++
Sbjct: 66 KGFNVTIPLKEKVIPLLKDISEEANIIGAVNTIV--NDEGVLRGYNTDVLGVIESL---- 119
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG--AKAKGARVVIANRTYDRARELAE- 422
L VIGAGGA +++ Y K R+ I NRT A L E
Sbjct: 120 -------NPYKEELQNSAVTVIGAGGAARSVIYALIRHFKVERINIVNRTEQIAESLKEY 172
Query: 423 --------TVGGHALSLADLEN-FNPEDGMILANTTSIGMQPKVDE--TPIPKHALGHYA 471
+ + L DL N FN ++ NTTS+GM P +D+ T IP+ +
Sbjct: 173 FSTKMLFNNIKAYPLMPPDLVNTFN--SSKLIVNTTSMGMFPDIDDAATTIPE-SFNKEQ 229
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYK 528
+VFD VYTP T+LL+ AE GA I++GL MF+ Q + +E +TG +M +YK
Sbjct: 230 IVFDVVYTPIKTKLLKLAESRGARIITGLRMFVEQGAKSFELWTG--EEMPKDEIYK 284
>gi|73748307|ref|YP_307546.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
gi|123620202|sp|Q3ZZN3.1|AROE_DEHSC RecName: Full=Shikimate dehydrogenase
gi|73660023|emb|CAI82630.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 286
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
Q PD +FGIIG PV HS SP + N AFK N +++ + +D+ + +
Sbjct: 2 QTIPDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNI 60
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHK +K D +D AK IGAVN I+ +G+L GYNTD+ G + +E
Sbjct: 61 RGLNVTIPHKIEVIKYIDTLDPAAKKIGAVNTIV--NENGQLKGYNTDFGGFVRLLE--- 115
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV- 424
R+ A A F ++GAGG+ A++ G + + R ++A++LA +
Sbjct: 116 HNRI--------APAKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMC 167
Query: 425 -------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G L+ A+LE E +I+ N T IGM ++ IP L V DA+
Sbjct: 168 LRFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAI 226
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P TRLL +AE+ GA I++GLEM + Q +E +T
Sbjct: 227 YNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWT 264
>gi|145577939|gb|ABP82688.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 28/252 (11%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A+ ++S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALR-------SIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGGHALSLA----DL 434
+++GAGGA +A+ + G + + +ANRT D+A+EL TV ALSL +
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATEEQ 168
Query: 435 ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA 494
EN++ I+ TT+IGM P+V+ TP+ +L +V D +Y P T++L EA+E GA
Sbjct: 169 ENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGA 223
Query: 495 TIVSGLEMFIGQ 506
I +G++MF+ Q
Sbjct: 224 MIQNGIDMFVYQ 235
>gi|14520666|ref|NP_126141.1| shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|24211539|sp|Q9V1H7.1|AROE_PYRAB RecName: Full=Shikimate dehydrogenase
gi|5457882|emb|CAB49372.1| aroE shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|380741199|tpe|CCE69833.1| TPA: shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
Length = 264
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 148/264 (56%), Gaps = 19/264 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
KV+G+IGKPV HS SP+++N F+ G + V+V V+++ K + +G + T+P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE K DE+ A+ I +VN II +G L GY TD VGA A+E
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTII--NLEGSLIGYTTDGVGARKALER---------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
+ + G+ +++GAGGAGKA+AY +K A +V+ NRT +A+ L E G SL +
Sbjct: 110 --FTEIEGRNVLILGAGGAGKAIAY-ELSKIANIVVLNRTPSKAKSL-EKFGVKGGSLDE 165
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
L N+ +L N TS+GM +E+ +P+ L +V D VY P TRLLR+AE G
Sbjct: 166 LPNYVGWAD-VLINATSVGMG--TNESLVPRRLLRRELIVMDIVYKPLKTRLLRDAESVG 222
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
++ GL M I Q E ++ +TG+
Sbjct: 223 CRVIDGLWMLIYQGAESFKLWTGI 246
>gi|46116890|ref|XP_384463.1| hypothetical protein FG04287.1 [Gibberella zeae PH-1]
Length = 1568
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 243/500 (48%), Gaps = 48/500 (9%)
Query: 49 GADLVEIRLDGLKNFNPRENIK---TLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++ + I+ TL + P +FT R +GG++ D +E +++
Sbjct: 1072 GSDAVELRVDLLQDRSIDSVIRQVSTLRASAKKPIVFTLRTESQGGKFPDSAYDEGLELY 1131
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
RLA+ +G +YIDVE+ + E ++ + ++I S H+ + T S ++ S + +A
Sbjct: 1132 RLAVRMGMEYIDVEMTLPDEMIKTVTESR-GYSRIIASHHDPKGTMSWKNASWIQYYNRA 1190
Query: 165 -SGADIVKF---ATTALDITDVARVFQITVHSQ-VPIIGLVMGERGLISRILCAKFGGFL 219
DI+K A T D D+AR +Q P+I + MG+ G +SR+L +F +
Sbjct: 1191 LQYGDIIKLVGIARTPEDNFDLARFKSRMQEAQKTPMISMNMGKAGKLSRVL-NRFLTPV 1249
Query: 220 TFGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKS 278
+ L +APGQ + ++ L + P F + GKP+ S+SP L+N FK
Sbjct: 1250 SHPALP--FKAAPGQMSAAEIRQALALLGDLEPHN--FYLFGKPISASRSPALHNTLFKQ 1305
Query: 279 VGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI 338
G + L D+I S DF G S TIP K + DE+ A++IGAVN +
Sbjct: 1306 TGLPHQYHRLETDNIEDVRDVLKSPDFGGASVTIPLKLDIMGKLDELSDAARTIGAVNTV 1365
Query: 339 I---RRQSDG--KLFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKLFVVIGAGGA 392
+ + +G +L G NTD+ G + A+ G++G+ + G + +V+G+GG
Sbjct: 1366 VPFGKPDDNGCRRLLGDNTDWRGMVHALRHAGIQGQDTDNKGAA--------MVVGSGGT 1417
Query: 393 GKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH----ALSLA-DLENFNPEDGMILA 446
+A + + G + IA R ++A +A LS A D E + ++++
Sbjct: 1418 TRAAIFALHSLGFGPIYIAARNQEKADAIAADFPKEYQLEGLSRASDAEKVSENLKVVIS 1477
Query: 447 NTTS-IGMQPKVDE-------TPIPKHALGHYALVFDAVYTPKITRLLREAEESGA-TIV 497
+ + P + E P P G ++ + Y P T +++ A+++G T +
Sbjct: 1478 TIPADRPIDPTLQELVGAVLSRPAPA---GERRVLLEMAYKPSHTPIMQLADDAGNWTTI 1534
Query: 498 SGLEMFIGQAYEQYERFTGL 517
GLE+ Q + Q+E +TG+
Sbjct: 1535 PGLEVLSSQGWYQFELWTGI 1554
>gi|161528058|ref|YP_001581884.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
gi|259585286|sp|A9A233.1|AROE_NITMS RecName: Full=Shikimate dehydrogenase
gi|160339359|gb|ABX12446.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
Length = 273
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 150/278 (53%), Gaps = 24/278 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HS SP +++ AF+ + + ++ + D++ + + AGF+ T
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKDELGEGIEGLKKIQIAGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK +K D++D IGAVN ++ +DG L GYNTD G + ++ + N+
Sbjct: 63 IPHKIEMMKYLDKIDESCSLIGAVNTVV--SNDGVLKGYNTDMDGFLEPLK-----KRNI 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAE-----TVG 425
S+ L ++GAGGA +A+ G AK K + IANRT ++A L E ++
Sbjct: 116 EIENSNVL------LLGAGGAARAIVAGFAKEKAKSITIANRTIEKANNLVEFAKKISLD 169
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+A+++ D + +D I+ N TSIG+Q + +PI + +V+D VY P T
Sbjct: 170 ANAITI-DQVGESAKDYNIIVNATSIGLQN--ESSPISFEGVNEKTVVYDIVYLPMNTDF 226
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
L++A+E ATI+ G EM +GQA +E + G+ NA
Sbjct: 227 LKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNA 264
>gi|383318782|ref|YP_005379623.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
gi|379320152|gb|AFC99104.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
Length = 268
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 144/269 (53%), Gaps = 25/269 (9%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFN---GVFVHLLVDDIAKFFQTYSSNDFAGFSCT 311
++G+IG P+ HS SP ++N AFK++G + G F H+ + + + F G + T
Sbjct: 4 MYGVIGDPIAHSLSPAMHNAAFKALGMDCYYGAF-HVKGRYLHEAVNGARALGFGGLNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHKEA ++ E D A+ IGA N I R + YNTD GAI+++ED
Sbjct: 63 VPHKEAVIRFV-EADAAAREIGAANTIDFRTNKA----YNTDAPGAIASLEDS------- 110
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
GV + G+ +V+GAGGA +A+ YG GA V IANRT +A +LA + +
Sbjct: 111 --GVK--VKGRSVLVLGAGGAARAVTYGLLKAGATVTIANRTAQKAADLAAYMREYGEVF 166
Query: 432 AD-LENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
++N + + I+ NTT++GM DET + L VFD VY P TRLL+E
Sbjct: 167 GTGMDNLREKVSISDIIVNTTTVGMGQ--DETLVTADMLSDRQTVFDLVYRPVETRLLKE 224
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A +GA + G+ M + Q +E +TG+
Sbjct: 225 ARLAGARAIDGITMLVRQGALSFEIWTGV 253
>gi|453086579|gb|EMF14621.1| Pentafunctional AroM protein [Mycosphaerella populorum SO2202]
Length = 1559
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 226/505 (44%), Gaps = 48/505 (9%)
Query: 49 GADLVEIRLD---------GLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
G+D +E+R+D G ++ P E + L + +P +FT R + +GGQ+ +
Sbjct: 1052 GSDAIELRVDLLVDPDKEPGETHWRPGFLSEQVALLRASTTLPLIFTLRSVSQGGQFPDE 1111
Query: 97 ENERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED- 154
E+ L + +G D++D+EL A E + + + + C +I S H+ + S D
Sbjct: 1112 ATEQAIALYAEGLRMGFDFVDLELTAAPELKEYVLSHR-KMCTIISSHHDPKGQLSWADG 1170
Query: 155 LSNLVARIQASG--ADIVKFATTALD--ITDVARVFQITVHSQ---VPIIGLVMGERGLI 207
A A+ DIVK A D D + F+ TV + +P+I + MGE G +
Sbjct: 1171 AEEWRAHFDAARQYGDIVKLIGVAKDSDANDDLKAFKKTVAKEFPHLPVIAMNMGELGKM 1230
Query: 208 SRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHS 266
SR+ GF+T + +APGQ + ++ + P K F + GKPV S
Sbjct: 1231 SRVT----NGFMTPVSHPALPVKAAPGQVSAAEIRKVLGIVGEIP-AKKFYLFGKPVQQS 1285
Query: 267 KSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326
+SP L+N F G ++ D + S +F G S TIP K + D +D
Sbjct: 1286 RSPALHNTLFNLTGLPHIYGTHETDQASSAADIIRSPEFGGASVTIPLKLDIMPLLDAID 1345
Query: 327 TVAKSIGAVNCII-RRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
A++IGAVN I+ + S GK L G+NTD+ G + A+ + G + VS AG
Sbjct: 1346 PAAQTIGAVNTIVPTKSSSGKNMLVGHNTDWQGMVLALRNA--GAQSTPAAVSRE-AG-- 1400
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLADLENFNPE 440
+V+G GG +A Y K G + + + R + +L + + L+ E
Sbjct: 1401 -MVVGGGGTARAAIYALKNMGYSPIYLLGRNKTKLAQLTASFPAEYNITLLSSPEEARQV 1459
Query: 441 DGMILANTTSIGMQPKVDET--PIPKHALGHYA------LVFDAVYTPKITRLLREAEES 492
+ +I +D T I + A ++ + Y P +T+L+ AE+S
Sbjct: 1460 AVPPVVAVGTIPGDLPIDTTLESILQTVFAQSAATTRSKVLLEMAYKPAVTQLMELAEKS 1519
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G V GLE + Q Q++ +T +
Sbjct: 1520 GWNTVPGLEALVAQGVHQFKLWTDI 1544
>gi|407978440|ref|ZP_11159271.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
gi|407414998|gb|EKF36614.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
Length = 280
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 146/270 (54%), Gaps = 20/270 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTI 312
++G+IG PVGHS SP ++N A K G +G + V+ D+A + +GF+ T+
Sbjct: 4 LYGLIGYPVGHSMSPDIHNAALKDAGIDGHYHGFQVEEHDLADAVSGMKALGISGFNVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK ++ D++D A+ + AVN + R G+L GYNTD G + ++ + L L
Sbjct: 64 PHKVEIMQYLDKIDVTAERLRAVNTV--RLEKGQLVGYNTDGEGFLHSLLEALDQPL--- 118
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALS 430
S L+ F++IGAGGA +A+ Y A+ A I NRT ++A L E+ G S
Sbjct: 119 ----SELS---FLMIGAGGAARAI-YMTMAEYAPKSFDITNRTIEKAESLIESAEGKITS 170
Query: 431 LADLENFNPE---DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A N E + ++ +TTSIGM P V+ETPI A+V D VY P T+LL
Sbjct: 171 SAIPLNQAEERLGNYDVIIHTTSIGMYPNVEETPISLTKAKKTAVVCDIVYNPIETKLLS 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
EA G V G+ MF+GQA +E +TG+
Sbjct: 231 EAAGLGLKTVDGVGMFVGQAARAFELWTGI 260
>gi|213401703|ref|XP_002171624.1| pentafunctional AROM polypeptide [Schizosaccharomyces japonicus
yFS275]
gi|327507670|sp|B6JVD0.1|ARO1_SCHJY RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|211999671|gb|EEB05331.1| pentafunctional AROM polypeptide [Schizosaccharomyces japonicus
yFS275]
Length = 1584
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 235/527 (44%), Gaps = 67/527 (12%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G D VE+R D L++ N E TL +P +FT R +GG++ + +E
Sbjct: 1077 GCDAVELRADLLEDPNSTTGYPSVEFVAEQFATLRAAIDLPIIFTVRSKDQGGRFPNANE 1136
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+E V+++ A+ G D +D+EL + E +I +K E K+I S H+ S
Sbjct: 1137 SEAVELMLAALRWGVDVLDLELGWSTESLQAIYARK-ENTKIITSWHDTAQRCSWAQPDE 1195
Query: 158 LVARIQASGA--DIVKFATTA------LDITDVARVFQITVHSQVPIIGLVMGERGLISR 209
+ ++ + A D+VKF A D+ + F+ ++ P+I + MG G +SR
Sbjct: 1196 WLQKLDMATAFGDVVKFVGIAKSMQDNFDLEKFRKSFK--GYTNKPLIAINMGTVGQLSR 1253
Query: 210 ILCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSK 267
+ F LT T +APGQ +++ ++ + MG K F + G P+ HSK
Sbjct: 1254 V----FNNVLTPVTSPALPYKAAPGQLSVRQIITALSL--MGSISPKKFYLFGTPIQHSK 1307
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SPIL+ + G + + + S DF G + TIP+K ++ DE+
Sbjct: 1308 SPILHKTCYDLTGLPYTYDLFETESVEGVKDVLSQPDFGGANVTIPYKLDILQYLDELSD 1367
Query: 328 VAKSIGAVNCIIRRQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
A+ +GAVN ++ +G KL G NTD+ G + R V G ++ L GK +
Sbjct: 1368 EARFLGAVNTVVPISENGKRKLRGDNTDWRGIV---------RTFVRAGANN-LNGKNAL 1417
Query: 386 VIGAGGAGKALAYGAKAKGAR-VVIANRTYDRAREL------------------AETVGG 426
VIGAGG +A + GA+ + + NRT A ++ +E
Sbjct: 1418 VIGAGGTSRAAIFAMHKLGAKNIYLLNRTLVNAEKVKAVFPEEYNVKVIDHTKQSEISEW 1477
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
L +A + + P D L + S + + E P K + D Y P T L+
Sbjct: 1478 TKLQVAAVVSTVPAD-RPLPESVSKVIDALLSEIPAQKK---EQYVFLDMAYKPLNTPLM 1533
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLL 533
A + G T ++GLE+ + Q +E +TGL H++ +++L
Sbjct: 1534 SVASKHGYTCINGLEVLLQQGLASFEIWTGLAVPFE--HVFGLYMVL 1578
>gi|402074932|gb|EJT70403.1| pentafunctional AROM polypeptide [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1575
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 231/526 (43%), Gaps = 65/526 (12%)
Query: 26 ICVPIMGESVD---KMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVP 79
+ VP +G S D + VV G+D VE+R+D L++ +P + + L +P
Sbjct: 1063 LTVPNIGASADIIPRAVV--------GSDAVELRVDLLEDHSPEFVTKQVALLRYVCNLP 1114
Query: 80 TLFTYRPIWEGGQYDGDENE-RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
+FT R +GG+Y D E + + LA+ LG +Y+DVE+ + + + K K
Sbjct: 1115 IVFTVRTASQGGRYPDDNYEGALTLYLLAIRLGVEYVDVEMTMPDDVIEKTTQAK-GKTS 1173
Query: 139 VIVSSHNYQYTPSVEDLS------------NLVARIQASGADIVKFATTALDITDVARVF 186
+I S H+ + T S + S ++V + S D FA +
Sbjct: 1174 IIASHHDPKGTLSWRNGSWIPFYNKALRHGDVVKLVGWSRGDDDNFALAGF------KAR 1227
Query: 187 QITVHSQVPIIGLVMGERGLISRILCAKFGGFL---TFGTLENGIVSAPGQPTIKDLLDL 243
+ H P+I L MGE G +SR+L GFL T L +APGQ + ++
Sbjct: 1228 MSSAHKNTPLIALNMGEAGKLSRVL----NGFLAPVTHSCLTAA--AAPGQLSAAEIRRG 1281
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
+ P + F + GKP+ S+SP L+N F+ G ++ + D ++ + +
Sbjct: 1282 LHLLGKLPRRR-FHLFGKPISKSRSPALHNTLFEQNGLPHIYSNFETDVASEMQELIRAP 1340
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII-RRQSDG--KLFGYNTDYVGAISA 360
DF G S TIP K + DEV AK+IGAVN II +Q DG +L G NTD+ G
Sbjct: 1341 DFGGASVTIPLKLGVIPLLDEVSDSAKTIGAVNTIIPTQQPDGSVRLVGENTDWRGMALC 1400
Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARE 419
+ S GV + + VV+GAGG +A + + G A + + R+
Sbjct: 1401 LR---------SSGVVRPPSPRPAVVLGAGGTARAAIFALHSLGFAPIYVVARSAANVET 1451
Query: 420 LAETVGGH------ALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
+A + L L+ P+ + I A+ + V ++ +
Sbjct: 1452 MASSFPSEYDIKHLCEPLTRLDQAPPQVAISTIPADKATDPGMTDVFKSVLSLAPAAGTR 1511
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++ + Y P +T ++ AE SG V G + Q Q+E +TG+
Sbjct: 1512 VLLEMAYFPPVTAMMELAEASGWATVPGATVLAAQGKYQFELWTGV 1557
>gi|145577907|gb|ABP82672.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
entomocidus]
Length = 238
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|366166816|ref|ZP_09466571.1| shikimate dehydrogenase [Acetivibrio cellulolyticus CD2]
Length = 294
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 24/294 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HS SP L+N +G + ++V L VD ++ + + DF GF+
Sbjct: 11 TRLLGLIGNPVEHSVSPQLHNSLSLLLGLDLLYVPLKVDKENLEVVVKALKAVDFVGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP+K +K D+ A +G+VN + ++ +G+L+GYNTD G + A ++
Sbjct: 71 TIPYKRDIMKFIDDNTKEAILMGSVNTV--KKIEGRLYGYNTDGEGFLRAFKEA------ 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
+ GK V+IGAGGA + +A GA ++ I NRT ++ ELAE V +
Sbjct: 123 ----AGTGFKGKKVVMIGAGGAARPIAVKIAMDGAEKISIVNRTTQKSVELAEVVNENVA 178
Query: 430 SLADLENFNP-------EDGMILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 481
+ + NF E+ I+ NTTS+GM P +D++PI +V+D VY P
Sbjct: 179 EIVQVYNFEDKTLKMAFEESDIIINTTSVGMSPDIDKSPIENIDYFRSGQIVYDIVYNPS 238
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP-GKMNAPHLYKFFVLLL 534
T+ L +AE G + GL M Q YE +TG+ + + +YK F+ +L
Sbjct: 239 KTKFLADAESRGCKAIGGLGMLFYQGINSYEIWTGVKFSEKDLKDIYKSFITIL 292
>gi|150402110|ref|YP_001329404.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
gi|166219473|sp|A6VFM7.1|AROE_METM7 RecName: Full=Shikimate dehydrogenase
gi|150033140|gb|ABR65253.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
Length = 280
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 33/282 (11%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
M TK+ G+IG PV HS SPI++N A + +G N V++ V +++ +
Sbjct: 2 MDTKTKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQIT 61
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
GF+ TIPHK +K DE+D AK+IGAVN + + +GK GYNTD +GA +E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGAKRTLEEK-- 117
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET--- 423
+ L K ++IG+GGA +A+ + AK + I NR ++A+ L+E
Sbjct: 118 ---------AGILIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEFSK 167
Query: 424 -------VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFD 475
+ L L D++NF+ I+ NTT +GM P + P IP + A+V D
Sbjct: 168 KLKKQKPINYGDLDL-DIKNFD-----IILNTTPVGMHPNTNVDPVIPLKNIKKDAVVMD 221
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+Y P L+EA + GA ++GL M + Q +E +TG+
Sbjct: 222 LIYNPIEPVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWTGM 263
>gi|452204749|ref|YP_007484878.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
gi|452111805|gb|AGG07536.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
Length = 286
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
Q PD +FGIIG PV HS SP + N AFK N +++ + +D+ + +
Sbjct: 2 QTIPDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNI 60
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHK +K D +D AK IGAVN I+ +G+L GYNTD+ G + +E
Sbjct: 61 RGLNVTIPHKIEIIKYIDTLDPAAKKIGAVNTIV--NENGQLKGYNTDFGGFVRLLE--- 115
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV- 424
R+ A A F ++GAGG+ A++ G + + R ++A++LA +
Sbjct: 116 HNRI--------APAKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMC 167
Query: 425 -------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G L+ A+LE E +I+ N T IGM ++ IP L V DA+
Sbjct: 168 LRFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAI 226
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P TRLL +AE+ GA I++GLEM + Q +E +T
Sbjct: 227 YNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWT 264
>gi|448384460|ref|ZP_21563298.1| shikimate 5-dehydrogenase [Haloterrigena thermotolerans DSM 11522]
gi|445658526|gb|ELZ11344.1| shikimate 5-dehydrogenase [Haloterrigena thermotolerans DSM 11522]
Length = 267
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 147/275 (53%), Gaps = 23/275 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G +V D +A + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDQDALAAAIDGADALGVAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+AA++ D +A IGAVN I S G GYNTD VGA+ A+ D
Sbjct: 62 IPFKQAALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAVGALRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
L VVIGAGGAG+A+A+G GA V IANRT +AR+LAE V GH
Sbjct: 113 ----DVDLEDARAVVIGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPRASGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LAD+E E +L N TS+GM+ D TP+P AL V DAVY P TRLLR+
Sbjct: 168 -GLADVERLLAE-ADVLVNATSVGMEE--DATPVPADALHGDLAVLDAVYQPLETRLLRD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
A E+GAT V G M + Q E +E +TG + A
Sbjct: 224 AAEAGATTVDGAWMLLYQGVEAFEIWTGWDAPVEA 258
>gi|333896985|ref|YP_004470859.1| shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112250|gb|AEF17187.1| Shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 153/278 (55%), Gaps = 24/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
+ T ++GIIG P+GHS SP+++N AF+++ FN V+V V +D+ +
Sbjct: 2 NINSKTSIYGIIGHPIGHSLSPLIHNYAFENLDFNSVYVSFDVNEEDLKDAIIGIKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE+ +K D + AK IGAVN I + + G L GYNTD G + ++++
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--KNNSGSLEGYNTDVTGFMESLKEH- 118
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAE-- 422
NV + GK V++GAGGA KA+A G GA+ + + NR+ D+A+EL+
Sbjct: 119 ----NVD------VVGKNAVILGAGGAAKAVAVGLALLGAKSIYVCNRSIDKAKELSIHM 168
Query: 423 ----TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ +S DL + D IL N TS+GM P VD +PI + + V+D +Y
Sbjct: 169 ENNFNIKSLGISYNDLNMLDEID--ILINATSVGMHPNVDVSPIGEDVVAKAKFVYDIIY 226
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P+ T L AE+ ++GL+M I QA + ++ +TG
Sbjct: 227 NPEKTLFLSYAEKYRIKYINGLDMLINQAIDSFKIWTG 264
>gi|145577899|gb|ABP82668.1| shikimate 5-dehydrogenase [Bacillus cereus]
Length = 238
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 150/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM+P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMRPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|403384196|ref|ZP_10926253.1| shikimate dehydrogenase [Kurthia sp. JC30]
Length = 277
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K + +IG P+ HS SP+++N + +G ++ H+ +++ + F +GF+ T
Sbjct: 3 KWYAVIGDPIEHSMSPLMHNTWMNAEERDGTYIPLHITKENLVEGFNGMKLLGCSGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKEA + D++D +A+ +GAVN ++R Q DG GYNTD +G + ++ED
Sbjct: 63 IPHKEAIIPLLDDIDPLAQKMGAVNTVVR-QLDGTYKGYNTDGLGFVKSLEDA------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET--VGGHA 428
V + K +VIGAGGA + + + +G ++ IANRT +A+ + + V A
Sbjct: 115 ---VGTHHKDKRVLVIGAGGASRGICFALAQEGYTKLSIANRTVAKAQAICDELDVVATA 171
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
SL + E G+I+ TTS G+ P+ L + A+V D VY P +T L +
Sbjct: 172 YSLEEAAASLDEFGIII-QTTSAGLNNSAFSLPLSLEKLSNTAIVADIVYNPLMTPFLAQ 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERF 514
+++ GAT+V+GL MFI Q Y +
Sbjct: 231 SQQKGATVVTGLGMFIHQGALAYSYW 256
>gi|403414545|emb|CCM01245.1| predicted protein [Fibroporia radiculosa]
Length = 1621
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 231/513 (45%), Gaps = 65/513 (12%)
Query: 48 SGADLVEIRLDGLKNFNPRE--------------NIKTLIKESPVPTLFTYRPIWEGGQY 93
+G D +E+R+D L++ E I L +++ +P +FT R I +GGQ+
Sbjct: 1110 TGVDAIELRVDMLRSQKDFERPGSWIPSVAYVTDQIAALRQKTSLPIVFTTRTISQGGQF 1169
Query: 94 DGD-ENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSV 152
E E ++ A +G +YIDVE+ + + + +K +I S H++ +
Sbjct: 1170 PPHAEAEAFELFHAAARMGVEYIDVEISWSEKRIQELVARKGHSV-IIASWHDWSGN-ML 1227
Query: 153 EDLSNLVARIQASG--ADIVKFATTA------LDITDVARVFQITVHSQVPIIGLVMGER 204
D + A+ Q + DIVK A L + A+ Q + + + P+IG+ MG
Sbjct: 1228 WDGKEVEAKYQIASKFGDIVKIVGKANGFEDNLALHRFAKRMQSSTNGK-PLIGINMGVE 1286
Query: 205 GLISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK 261
G +SRIL T + + ++ +APGQ + ++ + P + F I G
Sbjct: 1287 GQLSRILNP------TLSPVSHPLLPSKAAPGQLSFAEIQTALHLIGQSPAQR-FYIFGN 1339
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFAGFSCTIPHKEAAVK 320
P+ HS SP L+N AF+ +G + + + + S DF G S TIP K +
Sbjct: 1340 PIAHSMSPTLHNTAFQILGLPHKYELFETQSVGEEIKAALVSPDFGGASVTIPFKLDVIP 1399
Query: 321 CCDEVDTVAKSIGAVNCII-RRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
D + A++IGAVN I+ R++S+G L+G NTD++G + I L N + +
Sbjct: 1400 LLDSLSPEAEAIGAVNTIVPRKKSNGSPLLYGDNTDWIGILECIRSALP---NTAQTPDA 1456
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLADLEN 436
AL +IGAGG +A Y + G + + + NRT A L + + D
Sbjct: 1457 AL------IIGAGGTSRAAIYALRQLGVKAIYLYNRTRQSAEVLVNAFPDAGVVIIDELG 1510
Query: 437 FNPEDG--------MILANTTSIGMQPKVDET---PIPKHALGHYALVFDAVYTPKITRL 485
PE G + A+ TS P V+ T P A + +V D Y P T L
Sbjct: 1511 TWPEGGRPPTVIISTVPASATS--TSPNVENTLYLPSSIFASQYPGVVVDMAYKPAETPL 1568
Query: 486 LREAEESGATI--VSGLEMFIGQAYEQYERFTG 516
L A + V G+E+ + Q ++Q+ +TG
Sbjct: 1569 LGLAADVAQKWNRVRGVEVLLEQGFKQFYLWTG 1601
>gi|449131376|ref|ZP_21767592.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
gi|448940209|gb|EMB21120.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
Length = 493
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 228/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KAYIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P +D P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|145577951|gb|ABP82694.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tolworthi]
Length = 238
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|145577941|gb|ABP82689.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
azorensis]
gi|145577953|gb|ABP82695.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
zhaodongensis]
Length = 238
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|420263280|ref|ZP_14765918.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769568|gb|EJF49413.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 289
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 36/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ G + V++ V DD+A Q+ D G +
Sbjct: 9 TRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLLGVNL 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE A+ IGA+N I+ ++ G+L G+NTD +G + A+ED
Sbjct: 69 SMPHKMAAVPLMDECSPAAELIGAINTIVNQE--GRLIGHNTDGIGFMRALED------- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE----------- 419
+ ++ GK VIGAGGA A+ A G + + R ++R E
Sbjct: 120 ----IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTI---RVFNRKDEFYPIIQEKLTQ 172
Query: 420 LAETVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 473
+AE ++L DLE+ + +L N T +GM+P +P+ L +L V
Sbjct: 173 IAEKTASE-ITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESLAV 231
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+D +Y P+ ++LL++A+E GA +GL M + Q ++ +TG
Sbjct: 232 YDVIYNPRESQLLKDAKEVGAKTANGLSMLLYQGAAAFKLWTG 274
>gi|145577927|gb|ABP82682.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
oswaldocruzi]
Length = 238
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 145/248 (58%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV + + + + + +GF+ T PHK A + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ + DGKL GYNTD +G + A++ +S S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------FIS---SEPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T H+++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|449115970|ref|ZP_21752430.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
gi|449119976|ref|ZP_21756363.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|449122373|ref|ZP_21758713.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948129|gb|EMB28967.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948596|gb|EMB29430.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|448955456|gb|EMB36223.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
Length = 493
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 228/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P +D P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|390935057|ref|YP_006392562.1| shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570558|gb|AFK86963.1| Shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 283
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 153/279 (54%), Gaps = 24/279 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
+ T +FGIIG P+GHS SP+++N AF+++ FN V+V V +D+ +
Sbjct: 2 DINSKTGIFGIIGHPIGHSLSPLIHNNAFENLDFNSVYVSFDVKQEDLKDAIMGVKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE+ +K D + AK IGAVN I R + G L GYNTD G + ++++
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--RNNAGLLEGYNTDVTGFMESLKEH- 118
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAE-- 422
NV + GK V++GAGGA KA+A G GA+ + + NR+ D+A EL+
Sbjct: 119 ----NVD------VEGKNAVILGAGGAAKAVATGLALLGAKSIYVCNRSIDKANELSIHI 168
Query: 423 ----TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ ++ DL + D +L N TS+GM P VD +PI + + V+D +Y
Sbjct: 169 ENNFNIKSRGIAYNDLNMLDEID--MLINATSVGMHPNVDVSPIEEDVVAKAKFVYDIIY 226
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P+ T L AE+ ++GL+M + QA + ++ +TG+
Sbjct: 227 NPEKTLFLSYAEKYQIRYINGLDMLVNQANDSFKIWTGV 265
>gi|449109291|ref|ZP_21745927.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
gi|448959099|gb|EMB39821.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
Length = 493
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 228/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P +D P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKVFAG 489
>gi|296333275|ref|ZP_06875728.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675221|ref|YP_003866893.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149473|gb|EFG90369.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413465|gb|ADM38584.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 280
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 146/270 (54%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K + +G + V DD+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ A+ + I NRT ++A++L E+
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIARNVPKKFDICNRTLEKAKQLTESTPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E + +I+ +TTS+GM P VDE PI A+V D VY P T LL
Sbjct: 171 EVLSIKEAEERLKQYDVII-HTTSVGMYPNVDEVPISLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEANQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|399046902|ref|ZP_10739090.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
gi|398055052|gb|EJL47144.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
Length = 283
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 150/273 (54%), Gaps = 24/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T++ G+ G PV HS SP+++N AF G + + V+ + + G +
Sbjct: 6 TQLVGLFGHPVSHSLSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLRGINV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK A + DE+D +AK IGAVN ++ + DG+L GYNTD +G + ++ E G+
Sbjct: 66 TIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSLVEETGI--- 120
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH 427
L ++ ++GAGGA +A+A+ KG + + I NR+ +RA LAE VG
Sbjct: 121 ---------VLDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEHVGT- 170
Query: 428 ALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
+ +E +D + +L NTTSIGM P V +TP+P L +V D +Y P T
Sbjct: 171 IVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYNPLET 230
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
RLLREA+ GAT+ SG+ MF+ Q +E +TG
Sbjct: 231 RLLREAQAIGATVHSGVGMFVNQGALAFELWTG 263
>gi|422810317|ref|ZP_16858728.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378751981|gb|EHY62569.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 289
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSPI+YN +F+ G + ++ + +A + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKIFNLRGANV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ +GKL G+ TD +G I+ + D
Sbjct: 69 TMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFIANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
S+ +AGK +IGAGGA A+ GA+ + I + Y++A++ ++
Sbjct: 121 -----SADVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQTVTSIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
H L D E N E IL N T +GM P ETPI ++ L V D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRKELIVTDI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y PK T+LL +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 IYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|145577905|gb|ABP82671.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 143/249 (57%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A+ L E V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V+ TP+ +L +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|346994901|ref|ZP_08862973.1| shikimate 5-dehydrogenase [Ruegeria sp. TW15]
Length = 277
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 144/271 (53%), Gaps = 15/271 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G+IG PV HS+SP L+ K+ G G ++ + V D+ T F G + T+PH
Sbjct: 10 GVIGHPVAHSRSPKLHGHWLKTYGLAGHYIPMDVAPADLETVLHTLPKAGFVGANVTVPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEAA++ D V A IGA N ++ R+ DG + NTD G ++ + G N + G
Sbjct: 70 KEAALRLADHVSDRASVIGAANTLVFRE-DGSIHADNTDGYGFMANLRAGAP-DWNPADG 127
Query: 375 VSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
+ VV GAGGA +A+ A+A +++ NRT RA L E G +
Sbjct: 128 PA--------VVFGAGGAARAVLQALAEAGVPEILLTNRTRTRADHLKEEFGQRITVVDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N E+ ++ NTTS+GMQ + E +P L A+V D VY P TRLL++AEE+
Sbjct: 180 VQAGNVIENAELVVNTTSLGMQGQ-PELRVPLDGLQPGAVVTDLVYAPLQTRLLQQAEEA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G T V GL M + QA +ER+ G+ +++A
Sbjct: 239 GCTTVDGLGMLLHQAVPGFERWFGVRPEVDA 269
>gi|320585990|gb|EFW98669.1| dehydroquinase class 1 [Grosmannia clavigera kw1407]
Length = 1584
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 238/516 (46%), Gaps = 75/516 (14%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTLIK-----ESPVPTLFTYRPIWEGGQY-DGDENERVD 102
GAD VE+R+D L++F +++ T + +P +FT R + +GG++ D D ++ +
Sbjct: 1080 GADAVELRVDLLESFA-VDSVSTQVALLRSVAKKLPIIFTVRTVSQGGRFPDADTDQALA 1138
Query: 103 VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED---LSNLV 159
+ R+A+ +G +Y+D+E+ + +++ K K ++I S H+ + T S + + +
Sbjct: 1139 LYRIAIRMGIEYVDLEMTMPDHVIEAVTKSK-GKTRIIASHHDPKGTLSWRNGGWMPHFN 1197
Query: 160 ARIQASGADIVKFATTALDITD---VA--RVFQITVHSQVPIIGLVMGERGLISRILCAK 214
+Q DI+K A + D VA + + H++ P+I L MG +G +SR+L
Sbjct: 1198 KALQH--GDIIKLIGVARSMEDNFAVAAFKTRMLATHAK-PMIALNMGSQGKLSRVL--- 1251
Query: 215 FGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPILY 272
GFLT + + +APGQ + +++ + +G + + F + G P+ S+SP L+
Sbjct: 1252 -NGFLTPVSHPDLPFAAAPGQLSAREIRQALSL--IGDLEQRRFVLFGMPIAKSRSPALH 1308
Query: 273 NEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI 332
F G + +A S DF G S TIP K + DEV A++I
Sbjct: 1309 QALFDLTGLPHTYGLAETSSVADVLPIVRSPDFGGASVTIPLKLDVMDVVDEVTEAARAI 1368
Query: 333 GAVNCIIR-------RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
GAVN II + +L G NTD+ G I A LRG S + AG +
Sbjct: 1369 GAVNTIIPVAASKGGKAGGARLIGDNTDWRGMIHA----LRGAGVERPSTSQSAAG---L 1421
Query: 386 VIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
V+G+GG +A Y A G + +A R A A+ V G S +++ P
Sbjct: 1422 VVGSGGTTRAAVYALHALGYGPIYLAARNSANA---AKIVDGFPASY-NVQLLGP----- 1472
Query: 445 LANTTSIGMQ----PKVDETPIPKH-------------------ALGHYALVFDAVYTPK 481
++T+S G P V T +P L ++ + Y P+
Sbjct: 1473 -SSTSSTGADAATPPSVIITTVPADKPLDDSVQGLLTTLLQRSTTLPGPRVLLEMAYMPR 1531
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+T ++ AE G V GLE+ Q + Q++ +TG+
Sbjct: 1532 VTPAMKLAEGFGWKTVPGLEVLAAQGWHQFQLWTGI 1567
>gi|302872326|ref|YP_003840962.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
gi|302575185|gb|ADL42976.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
Length = 279
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 137/261 (52%), Gaps = 23/261 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYSSNDFAGFSCTIP 313
+IGK + HS SP ++N+ +G + V+ ++ + D K + D GF+ TIP
Sbjct: 6 LIGKSLKHSISPFVHNKILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVIGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE ++ CDEV + I A N + ++ +GKL YNTD++G ++ED
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEEGKLLAYNTDWIGFKKSLED---------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--HALS 430
+ + K +V+G+GGA KA YG GA+ V +ANRTY++A L E L
Sbjct: 114 -IGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAERLREVFQDILKILP 172
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITRLLRE 488
+ L + + +I+ NTTS+GM P ++ +P + G V+D +Y P T L +
Sbjct: 173 VEWLRRYEFKYDIII-NTTSVGMYPNIESSPFDFENYVAGIPVFVYDMIYNPPKTTFLEK 231
Query: 489 AEESGATIVSGLEMFIGQAYE 509
AE+ G+ +GL+M + QA E
Sbjct: 232 AEKKGSKTENGLKMLVYQAVE 252
>gi|418620053|ref|ZP_13182864.1| shikimate dehydrogenase [Staphylococcus hominis VCU122]
gi|374823616|gb|EHR87611.1| shikimate dehydrogenase [Staphylococcus hominis VCU122]
Length = 268
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK +G N + +H+ V D + + + +GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPVQDFDNIKEIITEKNLSGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D++D AK++GAVN + + K GYNTD +G + ++
Sbjct: 63 HKERIIPFLDDIDEQAKAVGAVNTV--KIEGNKWIGYNTDGLGYVKGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L+ +++GAGGA K +A ++ ++ IANRT R + +A++L
Sbjct: 111 -VYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDI--NAITLQ 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + E +I+ NTTS G+ E+ I L LV D +Y P T L++AEE
Sbjct: 168 QAEQYLDEFDIII-NTTSAGLDNN-KESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|328541693|ref|YP_004301802.1| shikimate 5-dehydrogenase [Polymorphum gilvum SL003B-26A1]
gi|326411445|gb|ADZ68508.1| Shikimate 5-dehydrogenase [Polymorphum gilvum SL003B-26A1]
Length = 281
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 141/268 (52%), Gaps = 23/268 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
I G PV HS+SP+++ K G G ++ L V +D +F++ + + G + T+PHK
Sbjct: 9 ITGWPVAHSRSPLVHGHWLKKYGLAGDYIRLPVAPEDAERFYRHFGESGLVGCNVTVPHK 68
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A CDE+D A+++GAVN + DG+L G NTD +G + G L+
Sbjct: 69 ETAAAACDELDEAARAMGAVNTLW-LDGDGRLCGANTDGIGFL--------GNLDQRAPG 119
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHALSLAD 433
A G VV+GAGGA +A+ + +A+G A V I NRT ++A +LA+ G G D
Sbjct: 120 WDARPGPA-VVLGAGGAARAVVWALRARGFAPVKIFNRTTEKASQLADHFGFGVEAYPWD 178
Query: 434 LENFNPEDGMILANTTSIGMQPK----VDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
+ +L NTT+ GM K +D +PK ALV D +YTP T LLR+A
Sbjct: 179 KLCEHLGQAALLVNTTAAGMTGKPPLQIDLDGLPKD-----ALVTDIIYTPLETDLLRQA 233
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
G V GL M + QA +ER+ G+
Sbjct: 234 AARGNRTVDGLGMLLHQAAPGFERWFGV 261
>gi|167768014|ref|ZP_02440067.1| hypothetical protein CLOSS21_02557 [Clostridium sp. SS2/1]
gi|317498392|ref|ZP_07956687.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710343|gb|EDS20922.1| shikimate dehydrogenase [Clostridium sp. SS2/1]
gi|316894286|gb|EFV16473.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 291
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 147/280 (52%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+FG+IG PV HS SP + N F++ G +G ++ + +++ +F ++ + G +
Sbjct: 9 TKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNIQGCNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K AA + DE+ A+ IGAVN I+ R DGKL+G+ TD G ++ ++D G
Sbjct: 69 TMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKDHGIG--- 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 426
+ GK V+ GAGGA A+ GA+ + I N ++RA+++ E +
Sbjct: 124 --------VEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQKMVEKIKA 175
Query: 427 HALSL-ADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
+L + + +D M IL N T +GM+PK D T I + H LV D
Sbjct: 176 KVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHEGLVVADV 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY P+ TR LREA+E G V G M + Q ++ FTG
Sbjct: 236 VYNPEETRFLREAKEHGCITVPGKGMLLWQGVASFKLFTG 275
>gi|443631865|ref|ZP_21116045.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347980|gb|ELS62037.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 280
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V DD+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGIQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ A+ + I NRT ++A++L E+
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIARDIPKKFDICNRTLEKAKQLTESTPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
++A + G + G+ MF+ QA ++ +TG
Sbjct: 230 KQANQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|421859666|ref|ZP_16291870.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410830764|dbj|GAC42307.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 297
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 136/270 (50%), Gaps = 17/270 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T VF +IG P+ HS SP+++N A + +G N V+ H+ + + + Q + G +
Sbjct: 20 TAVFAVIGDPIKHSTSPLMHNAALRELGLNAVYTAFHVASEQLEQAVQGMRALGMCGMNV 79
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKEA + DEVD A IGAVN I+ R G+L GYNTD +G + ++++ + L+
Sbjct: 80 TIPHKEAVMAHLDEVDESASVIGAVNTIVNRS--GRLIGYNTDGLGFVRSLQEEIFSNLH 137
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---- 426
S ++ ++ G A KA R+ IANRT +RA LA +
Sbjct: 138 QS---------RILLIGAGGAARGIAYALLKAGCRRLQIANRTLERAEVLARDLSAFGTV 188
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A+ L + + I+ +TTS+GM P + P L +V D VY P T LL
Sbjct: 189 AAVQLGTRPTIDAHEVDIVIHTTSVGMHPDGEAVPFDPDWLRPDMIVSDIVYNPLKTALL 248
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
REA + G SGL MF+ Q E +TG
Sbjct: 249 REAGKRGCRTHSGLGMFVYQGAIALELWTG 278
>gi|222529868|ref|YP_002573750.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
gi|254806728|sp|B9MKW9.1|AROE_ANATD RecName: Full=Shikimate dehydrogenase
gi|222456715|gb|ACM60977.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
Length = 288
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 138/261 (52%), Gaps = 23/261 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFF--QTYSSNDFAGFSCTIP 313
+IGK + HS SP ++N + ++ + LL ++ K F D GF+ TIP
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEMLKEFVEMVRKDEDVVGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE ++ CDEV + I A N + ++ DGKL YNTD++G ++ED RG
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKLLAYNTDWIGFKRSLED--RG------ 115
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--HALS 430
+ K +V+G+GGA KA YG GA+ V +ANRTY++A +L E L
Sbjct: 116 ---VDVKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAEKLKEVFQDILKILP 172
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITRLLRE 488
+ L + + +I+ NTTS+GM P ++ +P + G V+D +Y P T L+E
Sbjct: 173 VEWLRRYEFKYDIII-NTTSVGMFPNIESSPFDFENYVAGVPVFVYDMIYNPLKTAFLKE 231
Query: 489 AEESGATIVSGLEMFIGQAYE 509
AE+ G I +GL+M + QA E
Sbjct: 232 AEKKGIKIENGLKMLVYQAIE 252
>gi|315283346|ref|ZP_07871557.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
gi|313612994|gb|EFR86925.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
Length = 289
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 141/280 (50%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
T++ G+IG P+ HSKSP++YN +F+ G + ++ ++ +A + + G +
Sbjct: 9 TRLLGLIGTPIDHSKSPVMYNYSFQKAGLDYAYLAFDTPIEKVADAISAIKTFNLRGSNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN I+ +GKL G+ TD +G ++ + D
Sbjct: 69 TMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVANLRDA------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
+AGK +IGAGGA A+ GA+ + I + Y++A++ ++
Sbjct: 121 -----HVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQTITSIKQ 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
H L D E N E IL N T +GM P ETPI ++ L V D
Sbjct: 176 EVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRKELIVTDI 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY PK T+LL +AE +G IV GL M + Q E Y+ FTG
Sbjct: 236 VYNPKKTKLLLDAEAAGCKIVGGLGMLLWQGAEAYKLFTG 275
>gi|449107487|ref|ZP_21744141.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451969179|ref|ZP_21922408.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
gi|448961687|gb|EMB42382.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451702047|gb|EMD56481.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
Length = 493
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 228/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ ++++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPIKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P +D P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|145577911|gb|ABP82674.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar kenyae]
Length = 238
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|374585221|ref|ZP_09658313.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
gi|373874082|gb|EHQ06076.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
Length = 292
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 143/275 (52%), Gaps = 18/275 (6%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSC 310
+ VFGI G PV HS SPIL+N F+ +GFNGV+V VD F + + +G S
Sbjct: 7 QSAVFGIFGNPVSHSISPILHNRTFEKMGFNGVYVPFCVDQTGPFLKKAVLHMGLSGLSV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQS-DGKLF-GYNTDYVGAISAIEDG---L 365
TIPHK A K D+ D +++ GA N ++ R++ +G++ +NTD GA+ A++ L
Sbjct: 67 TIPHKLWAAKAADQRDALSELTGAANTLLVRETRNGRILSAHNTDGPGAMRALQTAVPDL 126
Query: 366 RGRLNV---SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422
+GR V GG + A+ G+L + A G + G + I + T R A+
Sbjct: 127 KGRRVVIAGYGGSARAIVGQLLL---ASGVKQVAVTGRNMPKIKAFIRSFTKKRPDWAAK 183
Query: 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
+ +L D E IL NTT +GM+ P+P+ L V D VY P++
Sbjct: 184 LIPLKEEALLDYE------AHILINTTPLGMKGFDLSLPVPESFLRPGLAVMDIVYRPEM 237
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T +L A+++ ATIV G M + QA Q+E FTG+
Sbjct: 238 TPILIAAKKNRATIVPGYWMLLYQAVLQFELFTGM 272
>gi|314936284|ref|ZP_07843631.1| shikimate dehydrogenase [Staphylococcus hominis subsp. hominis C80]
gi|313654903|gb|EFS18648.1| shikimate dehydrogenase [Staphylococcus hominis subsp. hominis C80]
Length = 268
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK +G N + +H+ V D + + + +GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPVQDFDNIKEIITEKNLSGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D++D AK++GAVN + + K GYNTD +G + ++
Sbjct: 63 HKERIIPFLDDIDEQAKAVGAVNTV--KIEGNKWIGYNTDGLGYVKGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L+ +++GAGGA K +A ++ ++ IANRT R + +A++L
Sbjct: 111 -VYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDI--NAITLQ 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + E +I+ NTTS G+ E+ I L LV D +Y P T L++AEE
Sbjct: 168 QAERYLDEFDIII-NTTSAGLDNN-KESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|403237574|ref|ZP_10916160.1| shikimate 5-dehydrogenase [Bacillus sp. 10403023]
Length = 281
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 140/271 (51%), Gaps = 19/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
KV+G+IG P+ HS SP + N+ F++ + H+ + + G + T
Sbjct: 3 KVYGVIGNPISHSMSPAMLNDMFETYHIEARYHAFHVQTGQVKAAIEGIRGLGVYGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK + DEV+ VA +IGAVN I+ +GKL GYNTD G I ++ +
Sbjct: 63 IPHKVEVIDYLDEVEEVAANIGAVNTIV--NENGKLIGYNTDGNGFIRSLNRVIS----- 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE----TVGG 426
+ L +++GAGGA + + A G +++ I NRT +RA+ + + V
Sbjct: 116 ----NEELRSANVLIVGAGGAARGIFISLAAMGVSKIDIVNRTIERAKGIIDDCRFEVES 171
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
H LS + E + ++ NTTS+GM P VD+TP+ L +V D +Y P T+ L
Sbjct: 172 HPLSFKEAE-ASLSKYQVVVNTTSVGMHPNVDDTPLSVENLAPKTIVSDIIYNPFETKFL 230
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
R+A + GA +G+ MF+ Q +E++TG+
Sbjct: 231 RDAAKYGAITQNGIGMFVYQGALAFEKWTGI 261
>gi|340624235|ref|YP_004742688.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
gi|339904503|gb|AEK19945.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
Length = 278
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 149/273 (54%), Gaps = 23/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A K + N + V +++ + +F GF+
Sbjct: 6 TKLVGLIGHPVDHSFSPLMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D+ A++IGAVN + + +GK GYNTD +G A+E+
Sbjct: 66 TIPHKMNIMKYLDEIDSDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEEK------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---- 426
+ L K ++IG+GGA +A+++ AK + I NR ++A L++ + G
Sbjct: 118 -----TGILYDKNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEISGKLKK 171
Query: 427 -HALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITR 484
+ L+ L+ N E+ I+ NTT +GM P + P IP + + A+V D +Y P
Sbjct: 172 ENPLNYGGLD-INIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPV 230
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L+EA++ GA ++G+ M + Q +E +TG+
Sbjct: 231 FLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGV 263
>gi|449128721|ref|ZP_21764967.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
gi|448941129|gb|EMB22033.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
Length = 493
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 230/516 (44%), Gaps = 52/516 (10%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVELQVAREFNDS--IRGKKP 134
R +GG + G E R+ + + + YID+E +F+ S
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFAYIDLE----SDFDSSGIEEAAMA 116
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHS 192
K+I S H+ V+++ + + DI K A TA + D++ +F+ + + +
Sbjct: 117 FDIKIIRSLHS---KVPVKNIVKTIEGLSRFETDIPKLAFTANCLNDISELFKASKLIQN 173
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDLYNFRQM 249
Q I+ VMG GL SRIL + + + I + + D L +LY F ++
Sbjct: 174 QEYILS-VMGPYGLSSRILSKQLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKI 232
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
DT+++G+IGK V S SP ++N+ F+ N V++ + + + + G S
Sbjct: 233 DNDTRLYGVIGKDVNTSLSPQIHNKGFEQKNLNSVYIPISAVSSKEALDFANFLNIKGLS 292
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-----EDG 364
T P K + + + +K IGAVN +I + K FGYNTD G A+ E
Sbjct: 293 VTAPFKSEIIPQINSISEASKFIGAVNTLINE--NKKWFGYNTDVDGFQQALIEFLNEKD 350
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
LR G A V+ G + I NRT ++A+ +AE
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIAEK- 395
Query: 425 GGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
+ A L+ N + ++ TT+ GM+P +D P+ + VF+ +Y P
Sbjct: 396 --YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRP 453
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 454 ETTKMLQRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|400593009|gb|EJP61023.1| pentafunctional AROM polypeptide [Beauveria bassiana ARSEF 2860]
Length = 1562
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 223/504 (44%), Gaps = 62/504 (12%)
Query: 49 GADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL- 104
G+D VE+R+D L++ + E + L + + +P +FT R +GG + D E + L
Sbjct: 1071 GSDAVELRVDLLRSQDLDFVTEQVSILRQHTGLPIIFTVRTASQGGSFPDDATEALSALY 1130
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
L + LG +Y+DVE+ +S+ G K+I S H+ + T S + S + +A
Sbjct: 1131 HLGLRLGTEYLDVEITTPDHILESV-GLARGHTKLIASHHDPRGTLSWRNASWIAHYNRA 1189
Query: 165 -SGADIVKFATTALDITDVARVFQ----ITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
DI+K A + D +F+ + PII + MG G +SR+L GFL
Sbjct: 1190 LQYGDIIKLVGLAQKVEDNFDLFRFKSRMASDGSPPIIAINMGTAGQLSRVL----NGFL 1245
Query: 220 T-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKS 278
T +APGQ + ++ F + GKP+ S+SP L+N F
Sbjct: 1246 TPVSHPALPFKAAPGQLSATEIRQALALVGQLEGCSFF-LFGKPISQSRSPSLHNGLFAQ 1304
Query: 279 VGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI 338
G + + D++A T F G S TIP K + DE+ A++IGAVN +
Sbjct: 1305 CGLPHRYHLMETDNVADVRATLRDPSFGGASVTIPLKLDIIDELDELTEAARTIGAVNTV 1364
Query: 339 IR---RQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAG 393
I DG +L G NTD+ G + A+ G G ++ G S+A+ VIG+GG
Sbjct: 1365 IPFSGSVGDGTKRLLGDNTDWKGIVHALRVGGLGEIS---GDSAAM------VIGSGGTT 1415
Query: 394 KALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452
+A + + G R+ + RT A+ +A + N+N + + N +I
Sbjct: 1416 RAAVFALHSLGFNRIYVVGRT---AKNVAAMIAEFP------RNYNLQ---AVTNIATIA 1463
Query: 453 MQPKVDETPIPKH-------------------ALGHYALVFDAVYTPKITRLLREAEESG 493
P V + IP ++ D Y P+ T ++ AE +G
Sbjct: 1464 TLPNVIVSTIPGDKPIDTITERVISGVVNASVTASSRRVLLDMAYKPRETPAVKIAENAG 1523
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
+ + GLE+ Q + Q++ +TG+
Sbjct: 1524 WSTIPGLEVLASQGWYQFQLWTGI 1547
>gi|410456866|ref|ZP_11310717.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
gi|409927248|gb|EKN64391.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
Length = 277
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 144/271 (53%), Gaps = 21/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K++ ++G P+GHS SP++ N+ F + ++ V +D+ + + GF+ T
Sbjct: 3 KLYAVLGDPIGHSMSPVMLNDLFSFYQIDAHYLPFQVKTEDLGDAVKGLRAIGVGGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK + D VD +A SIGAVN ++ GKL GYNTD G + ++ +
Sbjct: 63 IPHKSTIIPFLDVVDELALSIGAVNTVV--NDGGKLIGYNTDGPGFLRSLNPYV------ 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAET----VGG 426
+++G+ +VIGAGGA + + + AK K + IANRT +RA L +
Sbjct: 115 -----PSVSGQRILVIGAGGAARGIYFAMAKEKPLVIDIANRTLERAVNLIADCPYDISS 169
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
ALSL + E +I+ TT IGM P++ + P+ L ++V D +Y P T+LL
Sbjct: 170 KALSLQEASEIIGEYDLII-QTTMIGMSPRMADQPLNLDNLAKQSIVCDIIYNPLETQLL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++A GA +G++MF+ Q +E++TG+
Sbjct: 229 QDAASKGARTQTGVDMFVYQGALAFEKWTGI 259
>gi|376261037|ref|YP_005147757.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
gi|373945031|gb|AEY65952.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
Length = 294
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 139/276 (50%), Gaps = 23/276 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T+++G++G P+ H+KSP ++N FK G N V++ +LV++ + + +F GF+
Sbjct: 11 TQLYGVLGNPIEHTKSPFIHNTLFKKFGVNAVYLPVLVENGKLEQVMDGLKGINFLGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K+ +K DEV +GA+N + ++ +G+ G NTD G + DG
Sbjct: 71 TVPYKKDVIKYLDEVSAEGMLMGAINTV--KKQNGRFIGTNTDAEGFVRDFCDGFE---- 124
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH-- 427
+ GK +++GAGG +A+A +G + I NRT A+ +++ V +
Sbjct: 125 ------TTFKGKRVMLLGAGGTSRAIAVKLATEGIEHLTIVNRTEANAKSISDLVNSNFG 178
Query: 428 -----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTPK 481
L D + E+ I+ NTT GM +D TP LV+D +Y PK
Sbjct: 179 NIVNTMLPEKDKLDKELENNQIVINTTPAGMSTYLDSTPFDIDFNFNGTQLVYDVLYVPK 238
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TR L +AE +G I +G M I Q +E +TG+
Sbjct: 239 KTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGM 274
>gi|117923340|ref|YP_863957.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
gi|170652874|sp|A0L3K8.1|AROE_MAGSM RecName: Full=Shikimate dehydrogenase
gi|117607096|gb|ABK42551.1| shikimate dehydrogenase [Magnetococcus marinus MC-1]
Length = 286
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 144/278 (51%), Gaps = 29/278 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T + +IG PV HS SP ++N A + N +V L V ++ + Q +++ GF+
Sbjct: 11 ETGLLAVIGDPVSHSLSPKMHNLALRHCQLNYCYVALPVKPHNLVRAVQGFAAMGMRGFN 70
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKE + + A IGAVN ++ DGK+ G+NTD G I+ +++ R
Sbjct: 71 ATIPHKENLLPLMHTLSEEASHIGAVNTVV-IDDDGKMTGHNTDAYGFITGLKEAWR--- 126
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHA 428
S L+G +++G+GGA +A+ YG +AK ARV+IANRT +RA+ L E + +A
Sbjct: 127 -------SDLSGLTAIMLGSGGAARAILYGLIQAKAARVIIANRTIERAQALIEAMQPYA 179
Query: 429 ------LSLADLENFNPEDGMILANTTSIGMQ----PKVDETPIPKHALGHYALVFDAVY 478
++ + E +L NTTS+G++ P +D +P H+A V D VY
Sbjct: 180 PNTQLMVAPTQADQLPLESCDLLINTTSMGLKGETIPYIDLARLP-----HHAFVSDIVY 234
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LLR + GL M I Q + +E +TG
Sbjct: 235 GAHPTPLLRATAQHQLGGQDGLPMLIHQGAKAFELWTG 272
>gi|52081116|ref|YP_079907.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644927|ref|ZP_07999160.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|404489997|ref|YP_006714103.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683093|ref|ZP_17657932.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
gi|81690974|sp|Q65H34.1|AROE_BACLD RecName: Full=Shikimate dehydrogenase
gi|52004327|gb|AAU24269.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348996|gb|AAU41630.1| shikimate dehydrogenase AroD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392736|gb|EFV73530.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|383439867|gb|EID47642.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
Length = 278
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 31/292 (10%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTI 312
++G+IG PV HS SP ++N A K + G + V+ D+ + + GF+ T+
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK + +K D +D A+++GAVN + RR+ +G L GYNTD G + +++ L
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNTV-RREKEG-LVGYNTDGAGFLKSLKPSL------- 114
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL 431
L+ ++IGAGGA +A+ A+ R+ +ANRT ++A + G A +L
Sbjct: 115 ---DRPLSELSILLIGAGGAARAIFTTLAAETPKRLDVANRTPEKALAFTQRFDGEARAL 171
Query: 432 ------ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
ADL ++ I+ TTS+GM P V+ P+ LV D +Y P T L
Sbjct: 172 SLQEAEADLSAYD-----IVIQTTSVGMHPNVEAAPLSLANAKETCLVCDIIYNPLKTAL 226
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSF 537
L EAE G + G+ MFIGQA +E +TG + P++ K ++L
Sbjct: 227 LHEAEAKGLKTLDGVGMFIGQAALAFELWTG-----HEPNMEKMKSIVLQQL 273
>gi|145577913|gb|ABP82675.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
seoulensis]
Length = 237
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 141/246 (57%), Gaps = 17/246 (6%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKRI 108
Query: 385 VVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLA-DLENFNPEDG 442
+++GAGGA +A+ + G + + +ANRT D+A+EL S+A LE E G
Sbjct: 109 LLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEEQG 168
Query: 443 M--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
I+ TT+ GM P V+ TP+ +L +V D +Y P T++L EA+E GA I +G+
Sbjct: 169 NYDIIIQTTTRGMHPHVEHTPLQTCSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQNGI 228
Query: 501 EMFIGQ 506
+MF+ Q
Sbjct: 229 DMFVYQ 234
>gi|120603886|ref|YP_968286.1| shikimate 5-dehydrogenase [Desulfovibrio vulgaris DP4]
gi|120564115|gb|ABM29859.1| shikimate dehydrogenase [Desulfovibrio vulgaris DP4]
Length = 301
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++GI+G P+GH+ SP+L+N F V++ V A F + + G S T
Sbjct: 35 RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVT 94
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE-DGLRGRLN 370
IPHKE A++ CD V A+++GAVN + G + G NTD G ++ + G+R
Sbjct: 95 IPHKEEALRLCDRVTDRARAVGAVNTLF--LEGGVVCGENTDVTGFLAPLRARGVR---- 148
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHAL 429
+ AL V+GAGGA +A+ G G R V I+NRT+D+A ELA G +
Sbjct: 149 ----IDEAL------VLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADVV 198
Query: 430 SLADLENFNPEDGMILANTTSIGMQ-PKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
E + G+++ NTT GMQ ++ E+P+P A + +D VY P TR L +
Sbjct: 199 PWD--ERGSAAAGLVV-NTTPCGMQGARMGESPLPDGAFTGRGMAYDLVYNPLTTRFLAD 255
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A +G GL MF+ Q EQ+ +TGL
Sbjct: 256 ARAAGWETQDGLGMFVEQGREQFRIWTGL 284
>gi|228476109|ref|ZP_04060817.1| shikimate dehydrogenase [Staphylococcus hominis SK119]
gi|228269932|gb|EEK11412.1| shikimate dehydrogenase [Staphylococcus hominis SK119]
Length = 268
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK +G N + +H+ V D + + + +GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPVQDFDNIKEIITEKNLSGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D++D AK++GAVN + + K GYNTD +G + ++
Sbjct: 63 HKERIIPFLDDIDEQAKAVGAVNTV--KIEGNKWIGYNTDGLGYVKGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L+ +++GAGGA K +A ++ ++ IANRT R + +A++L
Sbjct: 111 -VYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDI--NAITLQ 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + E +I+ NTTS G+ E+ I L LV D +Y P T L++AEE
Sbjct: 168 QAEQYLDEFDIII-NTTSAGLDYN-KESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|358399107|gb|EHK48450.1| hypothetical protein TRIATDRAFT_236452 [Trichoderma atroviride IMI
206040]
Length = 1570
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 233/514 (45%), Gaps = 57/514 (11%)
Query: 40 VDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGD 96
VD+ + +D VE+R+D L + P + + L + P +FT R +GG++ +
Sbjct: 1059 VDILPRVTADSDAVELRVDLLHDVQPEAVMKQVSLLRYVTGKPIIFTVRSESQGGKFPDN 1118
Query: 97 ENE-RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
+NE R+++ RLA+ +G +YID+E+ E +R + +I S H+ S ++
Sbjct: 1119 DNELRLELYRLALRMGVEYIDLEVTSTDEIMQEVRDNRGSSV-IITSHHDPAGALSWKNA 1177
Query: 156 SNLVARIQA-SGADIVKFATTALDITD---VARVFQITVHSQ-VPIIGLVMGERGLISRI 210
S + A +A D++K TA + D + R + +Q PII L MG G +SR+
Sbjct: 1178 SWIAAYNRALQYGDVIKLVGTARSVDDNFDLIRFKSRMLAAQPTPIIALNMGSAGKLSRV 1237
Query: 211 LCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKS 268
L GFLT +APGQ + ++ L ++ P + F + GKP+ S+S
Sbjct: 1238 L----NGFLTPVSHPALPFKAAPGQLSAAEIRQGLSLLGEIEP--RNFYLFGKPISKSRS 1291
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
P L+N F G + L D + + + DF G S TIP K+ + DE+
Sbjct: 1292 PALHNTLFGQTGLPHHYQRLETDKVEDVVEVLRAADFGGASVTIPLKQDIMAHLDELTDA 1351
Query: 329 AKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKL 383
AK IGAVN ++ + +L G NTD+ G + + G+R + +G S+A
Sbjct: 1352 AKVIGAVNTVVPVADESLGRQRLIGDNTDWKGMVHVLRKAGVRTQ---AGDASAA----- 1403
Query: 384 FVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLADLENF-NPED 441
VIG GG +A + A G + + + R + + LA + D+++ + D
Sbjct: 1404 --VIGTGGTSRAAIFALNALGFKPIYVIGRDAQKVQALASSFPAE----YDIQSVASAAD 1457
Query: 442 GMILANTTSIGMQPKVDETPIP-----------------KHALGHYALVFDAVYTPKITR 484
LA+ + + + PI G ++ + Y P T
Sbjct: 1458 AEKLASKPVVSISTVPADRPIDGGVGEILGAALKPAAATASGEGQSRVLLEMAYHPPQTP 1517
Query: 485 LLREAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
+++ AE+ G T + GLE+ Q + Q+E + G+
Sbjct: 1518 VIQIAEKVGGWTTILGLEVLAAQGWYQFETWNGI 1551
>gi|17229549|ref|NP_486097.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
gi|24211460|sp|Q8YVC1.1|AROE_ANASP RecName: Full=Shikimate dehydrogenase
gi|17131148|dbj|BAB73756.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
Length = 289
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 139/269 (51%), Gaps = 30/269 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ + D++ ++ GFS
Sbjct: 6 TKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVVGFSV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA++IGAVN + R+ + + G NTD G I+ ++ +
Sbjct: 66 TIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK---- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARE---------L 420
+ ++ V++G GGA +A+ G G A + + R R E +
Sbjct: 120 ------RDWSQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHSWENSPI 173
Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAV 477
AE + H L P+ + L NTT IGM P+VDE+P+ L + + +D +
Sbjct: 174 AENLQVHTWDY--LAKLIPQANL-LVNTTPIGMYPQVDESPLSAEELVNLQTGTIAYDLI 230
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQ 506
Y PK T+ L++A++ GA I+ GLEM + Q
Sbjct: 231 YIPKPTQFLQKAQQQGAIIIDGLEMLVQQ 259
>gi|333371747|ref|ZP_08463689.1| shikimate dehydrogenase [Desmospora sp. 8437]
gi|332975676|gb|EGK12562.1| shikimate dehydrogenase [Desmospora sp. 8437]
Length = 283
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 30/276 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+ G+IG PV HSKSP + NEAF+ G V++ V +++ + S F G++
Sbjct: 7 TEKTGLIGHPVAHSKSPEMMNEAFRREGLPWVYLAFDVASEELGRAVAGLKSLGFRGWNV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGR 368
TIPHK A ++ DEV+ A+ IGAVN +I R +G+L G NTD G + ++ E G
Sbjct: 67 TIPHKVAVMEHLDEVEESAREIGAVNTVIHR--NGRLIGTNTDGAGYLESLVRETGF--- 121
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGH 427
+ G+ V++GAGGA +A+ Y A+A ++ I NRT +A++LA+ H
Sbjct: 122 ---------DVKGRRVVILGAGGAARAVGYTLARAGAEQIGIVNRTEKKAQDLAD----H 168
Query: 428 ALSLADLENFNP-------EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
+ +P + +L TTS+GM P + P+ +L LV D +Y P
Sbjct: 169 LRRWTRADGISPGEADTAIREADLLVQTTSVGMHPHPEGCPVDPASLHKDLLVSDLIYHP 228
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ TRLL+EA+ GA + SGL M + Q +ER+TG
Sbjct: 229 RQTRLLQEAKTRGARVHSGLGMLLHQGALAFERWTG 264
>gi|284164650|ref|YP_003402929.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
gi|284014305|gb|ADB60256.1| shikimate 5-dehydrogenase [Haloterrigena turkmenica DSM 5511]
Length = 271
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 152/278 (54%), Gaps = 27/278 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
VFG++G PVGHS SP ++ A+ +G +V + I + AG + T
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPEPSAIEDAIDGADALGIAGLNVT 63
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ ++C E D +A IGAVN I +G G+NTD VGA+ A+ D
Sbjct: 64 IPFKQDVLECV-EADELATRIGAVNTI-DFTGEGAPTGHNTDAVGALRALRDH------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
GVS + G VV+GAGGAG+A+A+G GA V IANRT AR+LA+ V GH
Sbjct: 115 --GVS--VDGARAVVVGAGGAGRAVAFGLADAGATVEIANRTASTARDLADEVPGATGHG 170
Query: 429 L---SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L +L DL + D +L N TS+GM+ DETP+P AL V DAVY P TRL
Sbjct: 171 LEDETLVDLLS----DADVLVNATSVGMEE--DETPVPADALHGDLAVLDAVYRPLETRL 224
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LR+A +GAT V G M + Q E +ER+TG ++A
Sbjct: 225 LRDATAAGATTVDGAWMLLYQGVEAFERWTGREAPVDA 262
>gi|325570234|ref|ZP_08146100.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325156717|gb|EGC68891.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 292
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 36/283 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ G + V++ V DD+A Q+ D G +
Sbjct: 12 TRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLLGVNL 71
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE A+ IGA+N I+ ++ G+L G+NTD +G + A+ED
Sbjct: 72 SMPHKMAAVPLMDECSPAAELIGAINTIVNQE--GRLIGHNTDGIGFMRALED------- 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE----------- 419
+ ++ GK VIGAGGA A+ A G + + R ++R E
Sbjct: 123 ----IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTI---RVFNRKDEFYPIIQEKLTQ 175
Query: 420 LAETVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 473
+AE ++L DLE+ + +L N T +GM+P +P+ L +L V
Sbjct: 176 IAEKTASE-ITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESLAV 234
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+D +Y P+ T+LL++A+ GA +GL M + Q ++ +TG
Sbjct: 235 YDIIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFKLWTG 277
>gi|168209925|ref|ZP_02635550.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
gi|170711954|gb|EDT24136.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
Length = 271
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 18/267 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R D+A + E + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKDKAFKKFEDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
DLE N E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGDLEEINEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
+G V GL M +GQ + E + G+
Sbjct: 227 NNGLKTVDGLFMLVGQGVKAEEIWNGI 253
>gi|386759165|ref|YP_006232381.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
gi|384932447|gb|AFI29125.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
Length = 280
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 144/270 (53%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIKALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E+
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNSPKKFDICNRTLEKAKRLTESTPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LSL + E E ++ +TTS+GM P VDE P+ A+V D VY P T LL
Sbjct: 171 EVLSLKEAEE-RLEQYDVIIHTTSVGMYPNVDEVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|323136819|ref|ZP_08071900.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322398136|gb|EFY00657.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 281
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G++G P+ HS+SP ++N G +GV+V L ++ + + + FAG + TIPH
Sbjct: 12 GVMGWPISHSRSPKIHNYWMSQYGIDGVYVPLAIEPGKLEAALRALPALCFAGCNLTIPH 71
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEAA+ D ++ A IGAVNC++ Q DG+L G N D G I+++ +
Sbjct: 72 KEAALNFLDRIEPAAARIGAVNCVVVGQ-DGELIGRNYDGYGFIASLRE---------AA 121
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLAD 433
A VVIGAGG +A+ G GAR + + NRT +RA+ LA GG + A
Sbjct: 122 PDWGAARAPCVVIGAGGGARAIVSGLIEAGAREIRLFNRTMERAKALAADFGGPVRACAW 181
Query: 434 LENFNPEDGM-ILANTTSIGMQPKVDETP--IPKHALGHYALVFDAVYTPKITRLLREAE 490
E G +L NTTS GM V + P + AL ALV D VY P T LL EA
Sbjct: 182 QERHEALAGAGLLVNTTSQGM---VGQQPLDLSLAALPATALVADIVYAPLETPLLAEAR 238
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
GAT V GL M + QA + ++G+
Sbjct: 239 RMGATAVDGLGMLMHQARPAFRDWSGV 265
>gi|255263051|ref|ZP_05342393.1| shikimate 5-dehydrogenase [Thalassiobium sp. R2A62]
gi|255105386|gb|EET48060.1| shikimate 5-dehydrogenase [Thalassiobium sp. R2A62]
Length = 277
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 138/265 (52%), Gaps = 15/265 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP L+ K+ G G ++ + V D + + + F G + TIPH
Sbjct: 10 GVIGSPIAHSKSPALHGHWLKTYGLKGAYIPMDVTDSNLEEVIRMLPKMGFVGVNITIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K AA+ D++ A IGA N +I R+ DGK+ NTD G I+ ++ G G SG
Sbjct: 70 KVAALWIADQMTDRATLIGAANTLIFRR-DGKIHADNTDGYGFIANLKQGAPGWQPASGA 128
Query: 375 VSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
VV+GAGGA +A +A +A R+++ NRT +A L G +
Sbjct: 129 A---------VVLGAGGAARAVIASLIEAGTTRIILTNRTRLKAEGLKSEFGSKVEVVDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N E+ + NTTS+GM E +P L +V D VYTP TRLL+EAE++
Sbjct: 180 VQAGNVLEEATTVINTTSLGMT-GAPEFRVPLDGLRPGTVVTDIVYTPLKTRLLQEAEQA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G V GL M + QA +ER+ G+
Sbjct: 239 GCITVDGLGMLLHQAVPAFERWFGV 263
>gi|423099141|ref|ZP_17086849.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|370794376|gb|EHN62151.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 29/286 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + +
Sbjct: 5 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 64
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K +K DE+ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 65 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 122
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
GV +AGK +IGAGGA A+ GA+ + I + Y++A++
Sbjct: 123 ---------GVD--MAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAKQT 171
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
++ H L D + E IL N T +GM P +ETP+ +
Sbjct: 172 IASIKQEVPDCIVHIYDLNDAAKLHEEIATSDILVNATLVGMHPHENETPVKDTTVFRKD 231
Query: 472 L-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L V D VY PK TRLL +AE +G+ + GL M + Q E Y+ FTG
Sbjct: 232 LIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTG 277
>gi|433592454|ref|YP_007281950.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|433307234|gb|AGB33046.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
Length = 269
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 145/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G +V D D+A + + AG + T
Sbjct: 4 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDQDDLAAAIEGADALGIAGLNVT 63
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A++ D +A IGAVN I S G GYNTD VGA+ A+ D
Sbjct: 64 IPFKQEALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAVGALRALRDH------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
L VV+GAGGAG+A+A+G GA V IANRT +AR+LAE V GH
Sbjct: 115 ----DVDLEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPRASGH- 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE E +L N TS+GM+ D TP+P AL V DAVY P TRLLR+
Sbjct: 170 -GLAALERLLAE-ADVLVNATSVGMEE--DSTPVPADALHGDLAVLDAVYQPLETRLLRD 225
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A E+GAT V G M + Q E +E +TG
Sbjct: 226 AAEAGATTVDGAWMLLYQGVEAFEIWTG 253
>gi|340992667|gb|EGS23222.1| pentafunctional arom polypeptide-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1581
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 229/506 (45%), Gaps = 60/506 (11%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L+++ P + L + VP ++T R +GG++ D D + + +
Sbjct: 1081 GSDAVELRVDLLESYEPEFVARQVALLRAAAQVPIVYTVRTQSQGGKFPDEDYDLALRLY 1140
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
+ + G +Y+D+E+ + ++ K +I S H+ Q S + S + +A
Sbjct: 1141 QTGLRSGVEYLDLEMTMPDHILQAVTDAK-GFTSIIASHHDPQCKLSWKSGSWIPFYNKA 1199
Query: 165 -SGADIVKFATTALDITDVA-----RVFQITVHSQVPIIGLVMGERGLISRILCAKFGGF 218
D++K A ++ D + + H P+I L MG G +SR+L GF
Sbjct: 1200 LQYGDVIKLVGVAREMADNFALTNFKAKMLAAHDNKPMIALNMGTAGKLSRVL----NGF 1255
Query: 219 LT---FGTLENGIVSAPGQPT---IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILY 272
LT L + +APGQ + I+ L L ++ P K F + GKP+ S+SP L+
Sbjct: 1256 LTPVSHPALPSK--AAPGQLSATEIRQALSLIG--EIEP--KSFYLFGKPISASRSPALH 1309
Query: 273 NEAFKSVGFNGVFVHLLVDDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS 331
N F G + D+ +K ++ S DF G S TIP K + D A++
Sbjct: 1310 NTLFYKTGLPHHYSRFETDEASKALESLIRSPDFGGASVTIPLKLDIMPLLDSATDAART 1369
Query: 332 IGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNVSGGVS----SALAGKLF 384
IGAVN II + DG L G NTD+ G + A+ L+ SG S +A
Sbjct: 1370 IGAVNTIIPQTRDGSTTTLVGDNTDWRGMVHAL-------LHSSGSGSVVQRTAAPRGAA 1422
Query: 385 VVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF-NPEDG 442
+V+G+GG +A Y G A + I R+ +R EL G+ DL +P G
Sbjct: 1423 MVVGSGGTARAAIYALHDLGFAPIWIVARSEERVAELVRGFDGY-----DLRRMTSPHQG 1477
Query: 443 -------MILANTTSIGMQPKVDETPIPKHALGHYA----LVFDAVYTPKITRLLREAEE 491
+I + + P + E + GH + ++ + Y P T L+ AE+
Sbjct: 1478 KDNMPSVVISTIPATQPIDPSMREVIVEVLKHGHPSAEGKVLLEMAYQPPRTPLMTLAED 1537
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
G V GLE+ Q + Q++ +TG+
Sbjct: 1538 QGWRTVGGLEVLAAQGWYQFQLWTGI 1563
>gi|260431960|ref|ZP_05785931.1| shikimate 5-dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415788|gb|EEX09047.1| shikimate 5-dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
Length = 277
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 15/265 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HS+SP L+ K+ G G +V + V D+ ++ F G + T+PH
Sbjct: 10 GVIGHPIAHSRSPALHGYWLKTYGLPGHYVPMDVAPADLETVLRSLPKAGFVGANVTVPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEAA++ D V A IGA N ++ R +DG + NTD G + + G + G
Sbjct: 70 KEAALRLADHVSDRASVIGAANTLVFR-ADGSIHADNTDGYGFMQNLRAGAPDWVPQDGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
VV GAGGA +A+ A+A +++ NRT RA L E G +
Sbjct: 129 A---------VVFGAGGAARAVLQALAEAGVPEILLTNRTRSRADHLKEEFGQRITVVDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N E+ ++ NTTS+GMQ + E IP L +V D VYTP TRLL +AE +
Sbjct: 180 VQAGNVIENAELVVNTTSLGMQGQ-PELRIPLDGLQPGTVVTDLVYTPLKTRLLEQAEAA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G T+V GL M + QA +ER+ GL
Sbjct: 239 GCTVVDGLGMLLHQAVPGFERWFGL 263
>gi|407768077|ref|ZP_11115456.1| shikimate 5-dehydrogenase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288790|gb|EKF14267.1| shikimate 5-dehydrogenase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 288
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 153/293 (52%), Gaps = 21/293 (7%)
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSN 303
+R + +++ G++G PV HSKSP L+ G +G ++ L V D+ ++ +
Sbjct: 7 YRTLSGTSRLAGVMGWPVSHSKSPRLHGYWLAKYGIDGCYMPLPVEPDNFQDALKSLRNL 66
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
F+G + TIP KE A+ CDE+ A+ IGAVN + + DG++ G NTD G I +
Sbjct: 67 GFSGVNVTIPQKEMAMPECDELSDRARRIGAVNTVTFAK-DGRMLGDNTDGFGFIENLR- 124
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAE 422
+ A VV+GAGGA +A+ +G+ + IANRT RA +L
Sbjct: 125 --------QEAPNIDFASGPAVVLGAGGASRAVLIAMLDEGSPEIRIANRTRKRAEDLVT 176
Query: 423 TVGGHALSLAD--LENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVY 478
+ +++ + L+ + D ++ NTTS+GM QPK++ I L ALV D VY
Sbjct: 177 EINDPRINVVNWPLDPTSLADAALVVNTTSLGMVGQPKLE---IDLEGLPQTALVTDIVY 233
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFV 531
P IT LL +A++ G +V GL M + QA + R+ G+ ++ P L +F +
Sbjct: 234 APLITDLLAQAKKRGNQVVDGLGMLLHQARPGFHRWFGIDPEV-TPELREFVL 285
>gi|75909313|ref|YP_323609.1| shikimate 5-dehydrogenase [Anabaena variabilis ATCC 29413]
gi|123609023|sp|Q3M8H2.1|AROE_ANAVT RecName: Full=Shikimate dehydrogenase
gi|75703038|gb|ABA22714.1| shikimate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 289
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 139/269 (51%), Gaps = 30/269 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ + D++ ++ GFS
Sbjct: 6 TKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVVGFSV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA++IGAVN + R+ + + G NTD G I+ ++ +
Sbjct: 66 TIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK---- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARE---------L 420
+ ++ V++G GGA +A+ G G A + + R R E +
Sbjct: 120 ------RDWSQQIAVILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHSWDNSPI 173
Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAV 477
AE + H L P+ + L NTT IGM P+VDE+P+ L + A+ +D +
Sbjct: 174 AENLQVHTWDY--LAKLVPQANL-LVNTTPIGMYPQVDESPLSTEELANLQTGAIAYDLI 230
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQ 506
Y PK T+ L++A++ GA + GLEM + Q
Sbjct: 231 YIPKPTQFLQKAQQQGAIAIDGLEMLVQQ 259
>gi|145577915|gb|ABP82676.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar sotto]
gi|145577925|gb|ABP82681.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar alesti]
gi|145577955|gb|ABP82696.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
fukuokaensis]
Length = 238
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 147/248 (59%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++S L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SIS---HEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++GAGGA +A+ + G + + +ANRT D+A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|374299531|ref|YP_005051170.1| shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332552467|gb|EGJ49511.1| Shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
Length = 305
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 145/282 (51%), Gaps = 27/282 (9%)
Query: 238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAK 295
++ +DL QM + GIIG P+GHS SP+L+N AF+ VG G ++ + + +
Sbjct: 27 RERMDLPIIPQM-----LCGIIGNPLGHSLSPVLHNWAFREVGVAGTYMAWPMAPESLDD 81
Query: 296 FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYV 355
F + G S TIPHK +K C+E+ ++ GAVN + ++ G L G NTD
Sbjct: 82 FMAAVLTLPIWGVSVTIPHKTGIMKFCEELSGRCRAAGAVNTLHWKK--GLLCGENTDVQ 139
Query: 356 GAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTY 414
G ++ + + G+ A A +++GAGGA +A+ G + G R + +ANRT
Sbjct: 140 GFLAPLAEI---------GIKPASA----LILGAGGAARAVIAGLREWGVRSIHVANRTP 186
Query: 415 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALV 473
+ AR L + ++ + E +L N T +GM + D TP P + +V
Sbjct: 187 EAARTLCNHMRCQGVAWEERTGVQAE---LLVNATPLGMLGERQDATPWPVESFTRGQIV 243
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
+D +Y P TR L EA ++G ++ GLEMF+ QA Q+ +T
Sbjct: 244 YDLIYNPIDTRFLVEARQAGCAVIPGLEMFLHQAAAQFRLWT 285
>gi|448395763|ref|ZP_21568857.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
gi|445660344|gb|ELZ13140.1| shikimate 5-dehydrogenase [Haloterrigena salina JCM 13891]
Length = 269
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 27/278 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
VFG++G PVGHS SP ++ A+ +G +V + I + AG + T
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPEPSAIEDAIDGAEALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K ++C E D +A IGAVN I +G G+NTD VGA+ A+ D
Sbjct: 62 IPFKRDVLECV-EADELATRIGAVNTI-DFTGEGAPTGHNTDAVGALRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
GV+ + G VV+GAGGAG+A+A+G GA V IANRT ARELA+ V GH
Sbjct: 113 --GVT--VDGARAVVVGAGGAGRAVAFGLADAGATVEIANRTASTARELADEVPGATGHG 168
Query: 429 L---SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L +L DL + D +L N TS+GM+ DETP+P AL V DAVY P TRL
Sbjct: 169 LENETLVDLLS----DADVLVNATSVGMEE--DETPVPADALHGDLAVLDAVYQPLETRL 222
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LR+A +GAT V G M + Q E +ER+TG ++A
Sbjct: 223 LRDATAAGATTVDGAWMLLYQGVEAFERWTGREAPVDA 260
>gi|9087115|sp|O26344.2|AROE_METTH RecName: Full=Shikimate dehydrogenase
Length = 283
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 152/278 (54%), Gaps = 33/278 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T V GI+G P+GHS SPI++N AF+S+G + ++V V +++ + + G +
Sbjct: 6 THVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVEGVNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKEA ++ D++ A IGAVN + + DG + GYNTD G + A+E+
Sbjct: 66 TIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETV----- 424
+++ G +++GAGGA +A A+ KGA + I NRT ++AR LAE +
Sbjct: 117 -----VTSVEGSSVLILGAGGAARACAFQLAEKGASDITILNRTPEKARLLAEDMADKLG 171
Query: 425 -----GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVY 478
GG+ L +++ + IL +TT +GM P D+ P+ L H LV D VY
Sbjct: 172 FEASYGGYELIQGSVKSAD-----ILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLVY 226
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P+ T LLREAE + A VSG+ M + Q E + +TG
Sbjct: 227 NPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTG 264
>gi|297616585|ref|YP_003701744.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297144422|gb|ADI01179.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 148/285 (51%), Gaps = 24/285 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDF 305
Q+ DT+V GIIG P+GHS SP ++N A + + N V+V +VD+ A + +
Sbjct: 2 QVKADTRVLGIIGNPLGHSLSPQMHNRALEHLRLNYVYVPFVVDNHALKEAVDGIRALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIP KEA + D++ A+ GA N + + GKL GYNTD G ++++++
Sbjct: 62 DGVNVTIPFKEAVIGYLDDLSEEARWCGAANVV--KNCGGKLVGYNTDGAGFMASLQE-- 117
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELA--- 421
+G L G+ VV+GAGGA +A+ Y +A+ +V+ NR+ DRA LA
Sbjct: 118 QGVLP---------GGQRVVVLGAGGAARAITYHLVQAEVESLVLINRSVDRAEALAGEL 168
Query: 422 ETVGGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
E +G + E ++ + +L NTTSIGM P + E P H LV D
Sbjct: 169 EGIGDVPVKAVGWERACLQEAIEEADLLINTTSIGMYPWIREMPPLDPEWFHPGLVVCDI 228
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKM 521
VY P TRLL EA G V+G+ MF+ Q ++ TG+ +
Sbjct: 229 VYNPIQTRLLMEASMRGLKTVNGVGMFVHQGALAFQLLTGVAAPL 273
>gi|448334888|ref|ZP_21524043.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
gi|445618352|gb|ELY71927.1| shikimate 5-dehydrogenase [Natrinema pellirubrum DSM 15624]
Length = 267
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 145/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G +V D D+A + + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDQDDLAAAIEGADALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A++ D +A IGAVN I S G GYNTD VGA+ A+ D
Sbjct: 62 IPFKQEALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAVGALRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
L VV+GAGGAG+A+A+G GA V IANRT +AR+LAE V GH
Sbjct: 113 ----DVDLEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEPKARQLAEAVPRASGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE E +L N TS+GM+ D TP+P AL V DAVY P TRLLR+
Sbjct: 168 -GLAALERLLAE-ADVLVNATSVGMEE--DSTPVPADALHGDLAVLDAVYQPLETRLLRD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A E+GAT V G M + Q E +E +TG
Sbjct: 224 AAEAGATTVDGAWMLLYQGVEAFEIWTG 251
>gi|428780823|ref|YP_007172609.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
gi|428695102|gb|AFZ51252.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
Length = 325
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 142/280 (50%), Gaps = 28/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP++ N A +G + V+V L V D+ + +++ D GF+
Sbjct: 28 TKLLGVIGDPVEHSLSPVMQNAALNELGLDYVYVPLPVKKGDLNRALAGFTAIDLVGFNA 87
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D + A+ +GAVN + R + + G NTD G I+ + R
Sbjct: 88 TIPHKQAIIPLLDRITPEAQKVGAVNTVWRTEKGWE--GTNTDVDGFIAPLIPLDRDWSQ 145
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
V + V++G GGA +A+ G + G ++V + R ++ + + L
Sbjct: 146 V-----------MPVILGNGGAARAVIVGCEKLGCSKVAVVGRNREKLEQFQRSWEETGL 194
Query: 430 -------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
S DL N + +L NTT IGM P+++ +P+ AL H A+V+D +YT
Sbjct: 195 KTEICPYSWQDLPNLLSQT-QLLVNTTPIGMSPQIESSPVEATALKHLPNGAIVYDLIYT 253
Query: 480 PKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGLP 518
P+ TR L+ A++ G T + GLEM I Q E + P
Sbjct: 254 PRPTRFLQLAQQLGEYTTIDGLEMLIQQGAIALETWLEQP 293
>gi|423301948|ref|ZP_17279971.1| shikimate 5-dehydrogenase [Bacteroides finegoldii CL09T03C10]
gi|408471039|gb|EKJ89571.1| shikimate 5-dehydrogenase [Bacteroides finegoldii CL09T03C10]
Length = 248
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGIDAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQSH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G V +RT+ A ++
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESVFVSRTHK------------ADNM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + I+ NTT +GM PKVD P IP + + L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEHTIIVNTTPVGMFPKVDFCPNIPYNLVTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|325090339|gb|EGC43649.1| 3-dehydroquinate synthase [Ajellomyces capsulatus H88]
Length = 1574
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 232/520 (44%), Gaps = 72/520 (13%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1055 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1114
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1115 DAALQLYRLAVRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIIASHHDPKGQLSWVNGSW 1173
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A I D + + ++ VPII + MG++G +SR+L
Sbjct: 1174 IQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML- 1232
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ +G K F +IG PV S+SP
Sbjct: 1233 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLIGEIKAKKFAVIGNPVSASRSPA 1287
Query: 271 LYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
++N F+ +G + L D ++AK F S DF G S TIP K + + DE+
Sbjct: 1288 MHNTLFRQMGLPHTYGTLETDNPEVAKEF--IRSPDFGGASVTIPLKLSIMPLLDEIAPE 1345
Query: 329 AKSIGAVNCII--RRQSDGK-----LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
A SIGAVN I+ DGK L G+NTD+ G + + D S+ L
Sbjct: 1346 AMSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAGL-- 1403
Query: 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
VIG GG +A + + G + + + R+ D+ + T + DL E
Sbjct: 1404 ----VIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDH-DIRDLRRL--E 1456
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFD-----------------------AV 477
IL T +IG P + PI H +FD
Sbjct: 1457 SSRILP-TVAIGTIP--GDKPIEPHMREILCRLFDLCEKANSDTEQARGVSTKRILLEMA 1513
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1514 YKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNI 1553
>gi|329114276|ref|ZP_08243038.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
gi|326696352|gb|EGE48031.1| Shikimate dehydrogenase [Acetobacter pomorum DM001]
Length = 288
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 151/279 (54%), Gaps = 24/279 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
K+ G++G PV HS+SP+L+N + +G +V L V D + F G +
Sbjct: 16 AKLAGVLGWPVAHSRSPVLHNYWLRRYEVDGAYVPLPVEPDAFVAAVLGLQAAGFRGANI 75
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKEAA K D +D A+ GAVN ++ + DGK+ GY+TD G ++++E
Sbjct: 76 TIPHKEAAFKIADVLDHSAQRAGAVNTLVF-EDDGKIHGYSTDGAGFVASME-------- 126
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
S G + ++ + +GAGGA +++A + G RV + NRT RA ELA+ + G
Sbjct: 127 -SAGFNLPEQAQVLL-LGAGGAARSVAAALQDCGLRVAVTNRTQGRAEELAKALPG---- 180
Query: 431 LADLENFNP-EDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKITR 484
D+ +N ED + +L NTTS+GM+ D P A ALV D VY P++T
Sbjct: 181 -LDVLPWNMWEDRLGAYSLLVNTTSLGMEGGPDAAFRPSLAHAAKALVVADIVYVPRVTP 239
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LL EA+ +G + GL M + QA ++++ G+ +++A
Sbjct: 240 LLAEAQSAGLRTLGGLGMLLHQARLGFQKWYGVNPEVDA 278
>gi|427427552|ref|ZP_18917596.1| Shikimate 5-dehydrogenase I alpha [Caenispirillum salinarum AK4]
gi|425883478|gb|EKV32154.1| Shikimate 5-dehydrogenase I alpha [Caenispirillum salinarum AK4]
Length = 282
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 19/271 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+V G++G PV HS+SP L+ + G +G ++ L V +D A + FAG +
Sbjct: 7 TRVAGVMGWPVTHSRSPRLHGWWLEEHGIDGAYIPLPVRPEDFATAVRALPMLGFAGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKEAA++ CD+V +A+ IGAVN ++ R DG L+G NTD G + + G RG
Sbjct: 67 TVPHKEAALRACDDVSDLAERIGAVNTLVCRD-DGTLYGDNTDGFGFLENLRAGCRG--- 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
A AG V+ G A +A A V + NRT RA ELA ++GG A++
Sbjct: 123 -----WQADAGPAVVLGAGGAARAVVAALQDAGCPEVRLTNRTRARAEELAASLGG-AMT 176
Query: 431 LADLE-NFNPEDGM-ILANTTSIGMQ--PKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ D + DG +L NTT++GM+ P ++ +P L ALV D VY P +T LL
Sbjct: 177 VVDWDARAEALDGAGLLVNTTTLGMEGAPPLE---MPLDPLPRGALVTDIVYAPLVTDLL 233
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
AE G +V GL M + Q +E + G+
Sbjct: 234 TRAEARGNPVVDGLGMLLHQGRPGFEAWFGV 264
>gi|434396815|ref|YP_007130819.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
gi|428267912|gb|AFZ33853.1| Shikimate dehydrogenase [Stanieria cyanosphaera PCC 7437]
Length = 288
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 26/279 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GIIG PV HS SP+++N A + +G + V++ V +++A +++ D GFS
Sbjct: 8 TKLLGIIGDPVEHSLSPVMHNAAIEQMGIDYVYIPFPVKPNNLAIAIAGFATIDLIGFSV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + EV A+ IGAVN + R + + G NTD +G ++ +++ R
Sbjct: 68 TIPHKQAIIPLLSEVTPEAEMIGAVNTVWRTKVGWQ--GTNTDVIGFVAPLQNLERNWHQ 125
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGH-- 427
V+ V++G GGA +A+ G G + + I R D+ + ++ +
Sbjct: 126 VTP-----------VILGNGGAARAVIVGLIQLGCQEIHIVGRNKDKMAQFYQSWQDNRE 174
Query: 428 ---ALSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYT 479
L + E N +L NTT IGM P+V+++PI L A+V+D +YT
Sbjct: 175 IIKKLKIHYWEGLNALLPAAELLINTTPIGMYPQVEQSPIDAQLFKKLSSDAIVYDLIYT 234
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
P T+ L+ A++ GA I+ GLEM + Q E + P
Sbjct: 235 PNPTKFLQLAQKQGAIIIDGLEMLVQQGVAALEIWLQQP 273
>gi|299822865|ref|ZP_07054751.1| shikimate dehydrogenase [Listeria grayi DSM 20601]
gi|299816394|gb|EFI83632.1| shikimate dehydrogenase [Listeria grayi DSM 20601]
Length = 274
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 137/264 (51%), Gaps = 18/264 (6%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
+ +IG P+ HS SP ++N AF+S + + + + V+ + DF GF+ T+P
Sbjct: 4 YAVIGNPINHSLSPSMHNAAFRSEERDANYEAIQVSVEAFDAEIAHLLAGDFNGFNVTVP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE+ AK GAVN +I+ +DGK G NTD G + + +
Sbjct: 64 FKERIIPHLDELSPFAKRCGAVNTVIK--ADGKWLGDNTDGAGFMEGLHE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ + + ++IGAGGA KA+ A A ++VIANRT ++A + + A SLA
Sbjct: 112 -IKAVTSEDRILIIGAGGASKAIYLALADASPQQLVIANRTVEKAAAMVQKTH-EAWSLA 169
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + D I+ TTSIG+ +ETPI L +V D +Y P T L++A+
Sbjct: 170 KAEKY-LADFTIIIQTTSIGLPASKNETPIQLTNLQAGTVVVDIIYNPAETAFLKQAKTK 228
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
GA I +GL MF GQ Y+R+TG
Sbjct: 229 GAVIQNGLPMFSGQGALAYQRWTG 252
>gi|327507649|sp|C5G8R4.1|ARO1_AJEDR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239607236|gb|EEQ84223.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ER-3]
Length = 1597
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 240/519 (46%), Gaps = 70/519 (13%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIIASHHDPKGELSWANGSW 1194
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VPII + MG++G +SR+L
Sbjct: 1195 IQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML- 1253
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ + +G +K F +IG PV S+SP
Sbjct: 1254 ---NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSL--IGEIKSKKFAVIGNPVSASRSPA 1308
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
++N F+ +G ++ L +D + S DF G S TIP K + DE+ A
Sbjct: 1309 MHNALFRQMGLPHIYGTLETEDPEIVKKFIRSPDFGGASITIPLKLDIMPLLDEIAPEAV 1368
Query: 331 SIGAVNCII------RRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
SIGAVN I+ QS +L G NTD+ G + + D G + +++ AG
Sbjct: 1369 SIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--GAYPAATPTTTS-AG-- 1423
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHALSLADLENFNPED 441
+VIG GG +A + ++ G + + + R+ D+ + T H + + LE+ +
Sbjct: 1424 -LVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDIRI--LEDVKALE 1480
Query: 442 GMILANTTSIGMQPKVDETPIPKH-----------------------ALGHYALVFDAVY 478
+ T +IG P + PI H + ++ + Y
Sbjct: 1481 SL---PTVAIGTIP--GDKPIEPHMREILCELFDLCEKANSDAEQARGISTKRILLEMAY 1535
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1536 KPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTDI 1574
>gi|239637593|ref|ZP_04678565.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
gi|239596811|gb|EEQ79336.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
Length = 271
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 138/267 (51%), Gaps = 24/267 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N+ F+S+ + V++ ++D + GF+ TIP
Sbjct: 5 FAVIGDPISHSLSPLMHNKNFESLDLKYTYEAVNISIEDFDHIKEIIEGKSLDGFNITIP 64
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE+D + S+GAVN ++ R DGK GYNTD +G ++ GLR
Sbjct: 65 HKERIIPYLDEIDHQSSSVGAVNTVLIR--DGKWIGYNTDGIGYVT----GLR------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V + L +++GAGGA K +A K ++ +ANRT R V +L A
Sbjct: 112 QVYNDLENAYILILGAGGASKGIANELNKFVQPKLTVANRTMKRFESWDLDVNQISLDQA 171
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D PI L LV D VY P T +L AE
Sbjct: 172 ESHLDEFD-----IIINTTPAGMDNNQD-IPIDLKYLNPETLVSDIVYIPYKTPILIAAE 225
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
+ G I +GL+MF+ Q E ++ +TGL
Sbjct: 226 KKGNPIYNGLDMFVYQGAESFKIWTGL 252
>gi|326203602|ref|ZP_08193466.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325986422|gb|EGD47254.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T+++G++G P+ H+KSP ++N FK G NGV++ +LV+ + + +F GF+
Sbjct: 11 TQLYGVLGNPIEHTKSPFIHNTLFKKFGVNGVYLPVLVETGKLEQVMNGLKGINFLGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K+ + DEV +GA+N + ++ +G+ G NTD G + DG
Sbjct: 71 TVPYKKDVINYLDEVSAEGMLMGAINTV--KKQNGRFIGSNTDAEGFVRDFCDGF----- 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH-- 427
+ GK +++GAGG +A+A +G + I NRT A+ ++ V G+
Sbjct: 124 -----GTTFKGKRVMLLGAGGTSRAIAVRLAMEGIEHLTIVNRTEANAKSISNLVNGNFG 178
Query: 428 -----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTPK 481
L D + E+ I+ NTT GM +D TP LV+D +Y PK
Sbjct: 179 NLVSTMLPEKDKLDKAIENSQIVINTTPAGMSTYLDSTPFDIDFNFNGTQLVYDVLYVPK 238
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TR L +AE +G I +G M I Q +E +TG+
Sbjct: 239 KTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGI 274
>gi|429761248|ref|ZP_19293678.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|429184272|gb|EKY25295.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 291
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+FG+IG PV HS SP + N F++ G +G ++ + +++ +F ++ + G +
Sbjct: 9 TKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNIQGCNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K AA + DE+ A+ IGAVN I+ R DGKL+G+ TD G ++ ++D G
Sbjct: 69 TMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKDHGIG--- 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 426
+ GK V+ GAGGA A+ GA+ + I N ++RA+++ E +
Sbjct: 124 --------VEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQKMVEKIKA 175
Query: 427 HALSL-ADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
+L + + +D M IL N T +GM+PK D T I + H LV D
Sbjct: 176 KVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHEGLVVADV 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY P+ T+ LREA+E G V G M + Q ++ FTG
Sbjct: 236 VYNPEETKFLREAKEHGCITVPGKGMLLWQGVASFKLFTG 275
>gi|393222440|gb|EJD07924.1| Pentafunctional AroM protein [Fomitiporia mediterranea MF3/22]
Length = 1609
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 243/519 (46%), Gaps = 82/519 (15%)
Query: 48 SGADLVEIRLDGLK---------NFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQY 93
+G D +E+R+D L+ N+ P E + L +++ +P +FT R + +GG +
Sbjct: 1104 AGTDAIELRVDLLRVPKDVETRGNYIPPTAYVIEQLAALRQKTSLPIVFTVRSVSQGGSH 1163
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDS-IR--GKKPEKCKVIVSSHNYQYT 149
DG E E + + +A+ +G +YIDVEL +ND+ IR ++ ++I S H++
Sbjct: 1164 PDGAEAEALALFNVAVRMGCEYIDVELA----WNDARIREFAQRKGNSQIIASWHDWSGN 1219
Query: 150 -----PSVED-------LSNLVARIQASGADIVKFATTALD---ITDVARVFQITVHSQV 194
P V++ L N+V IV AT+ D + D R + T ++
Sbjct: 1220 MKWDGPQVKEKYAQAKELGNIV--------KIVGKATSLEDNFALADFVRSVEATPDAK- 1270
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVS---APGQPTIKDLLDLYNFRQMGP 251
P I + G G +SRIL + T + + ++S APGQ + + + P
Sbjct: 1271 PFIAINTGYEGQLSRILNS------TLSPITHPLMSVSAAPGQLSFAQIQTALHLIGQLP 1324
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFN---GVFVHLLVDD-IAKFFQTYSSNDFAG 307
+ + + G P+ S SP L++ F+++G +F + VD+ I Q+ S F G
Sbjct: 1325 AQRYY-LFGTPISQSPSPTLHSTGFQALGLPHTYSLFETVEVDESIRSLLQSPS---FGG 1380
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDG 364
S TIPHK A + DE+ AK+IGAVN II G L G NTD++G I
Sbjct: 1381 ASVTIPHKLAVMPLLDELTADAKAIGAVNTIIAETDPGGKRILRGDNTDWIG----IRST 1436
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET 423
+ RL G V +A +VIGAGG +A Y + G R+ + NRT A L +
Sbjct: 1437 VLARLPGDGRVPAA-----GLVIGAGGTSRAALYALHSLGVGRIYLYNRTRSAAEALRDA 1491
Query: 424 VGGHALSLAD-LENFNPEDGMILANT---TSIGMQPKVDETPIPKHAL-GHYALVFDAVY 478
+ + L D L++F+ ++ +T ++ ++ + + K + +V D Y
Sbjct: 1492 FPEYNIVLLDNLDSFSDAAPAVVISTIPGSATTLEKGSNGLYLTKALFSAEHGVVVDMAY 1551
Query: 479 TPKITRLLREAEES-GATIVSGLEMFIGQAYEQYERFTG 516
P T LL A S G V G+++ + Q + Q E +TG
Sbjct: 1552 KPAETPLLSLAASSQGWKTVRGVDVLLEQGFAQLELWTG 1590
>gi|392563015|gb|EIW56195.1| aromatic amino acid family biosynthesis-like protein [Trametes
versicolor FP-101664 SS1]
Length = 1616
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 223/513 (43%), Gaps = 65/513 (12%)
Query: 48 SGADLVEIRLDGLKNFNPR----------------ENIKTLIKESPVPTLFTYRPIWEGG 91
+G D +E+R+D L++ PR E I L ++ +P +FT R + +GG
Sbjct: 1105 AGVDAIEVRVDLLRS--PRDFDKLGAYIPPTSYVTEQITALRHKTRLPLIFTVRTVSQGG 1162
Query: 92 QY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT- 149
Q+ D E E ++ A+ LG +YIDVE+ + + +K K+I S H++
Sbjct: 1163 QFPDHAEKEAFELFLTAVRLGVEYIDVEISWTEKNIQDLVSRK-GHSKIIASWHDWSGNM 1221
Query: 150 ----PSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV-----PIIGLV 200
VE L R DIVK A + D + + +Q PII L
Sbjct: 1222 HWGGKPVEAKHQLAHRF----GDIVKIVGKANALEDNFALHNFVLRTQAVSGAKPIIALN 1277
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
MG G +SRIL + F +T L + +APGQ + + + P K F + G
Sbjct: 1278 MGVEGQMSRILNSTFSP-VTHPLLPSK--AAPGQLSFAQIQTALHLLGQLPAKK-FYLFG 1333
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ-TYSSNDFAGFSCTIPHKEAAV 319
P+ HS SP L+N AF+++G + L + + + ++ DF G S TIP K +
Sbjct: 1334 TPIAHSMSPTLHNTAFEALGLPHKYELLETATVGEEIKAAITAPDFGGASVTIPFKRDII 1393
Query: 320 KCCDEVDTVAKSIGAVNCII-RRQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
D + A+ IGAVN +I +++ DG L+G NTD+ G +I+ L +
Sbjct: 1394 PLLDGLSADAEIIGAVNTVIPQKREDGSLSLYGDNTDWRGITHSIQRSLPQGI------- 1446
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLADLE 435
L + +VIGAGG +A Y G + + + NRT A L + L +
Sbjct: 1447 --LTPEAALVIGAGGTSRAAIYALWKLGIQTIYLINRTRGSAETLVAAFPDAKIQLVEEL 1504
Query: 436 NFNPEDG--------MILANTTSIGMQPKVDETPIPKH--ALGHYALVFDAVYTPKITRL 485
P G + A+ TS+ + +P+ A +V D Y P T L
Sbjct: 1505 GVWPNGGPAPTVVISTVPASATSLDSS-ATNALYLPRALFAATKGGVVVDMAYKPADTPL 1563
Query: 486 LREAEESGA--TIVSGLEMFIGQAYEQYERFTG 516
L A G V G+E+ + Q Y Q +TG
Sbjct: 1564 LLLAANVGTHWRTVKGVEVLLEQGYHQLHLWTG 1596
>gi|428280059|ref|YP_005561794.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485016|dbj|BAI86091.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 280
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V DD+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|115492079|ref|XP_001210667.1| hypothetical protein ATEG_00581 [Aspergillus terreus NIH2624]
gi|121742811|sp|Q0D0F3.1|ARO1_ASPTN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|114197527|gb|EAU39227.1| hypothetical protein ATEG_00581 [Aspergillus terreus NIH2624]
Length = 1581
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 229/507 (45%), Gaps = 54/507 (10%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D LK+ +I + L + +P +FT R +GG++ D +
Sbjct: 1075 GSDAVELRVDLLKDPASDSDIPSVDYVAEQMSFLRSRTALPLIFTIRTKSQGGRFPDDAH 1134
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ +D+ RLAM G++++D+E+ E ++ K K+I S H+ + S ++S
Sbjct: 1135 DAAMDLYRLAMRSGSEFVDLEIAFPDEMLRAVTEMK-GYSKIIASHHDPKGELSWSNMSW 1193
Query: 158 LVARIQA-SGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISRILC 212
+ +A D++K A LD R F+ VP+I + MG+ G +SRIL
Sbjct: 1194 IKYYNRALEYGDVIKLVGVAKNLDDNTALRKFKTWAEEAHDVPMIAINMGDNGQLSRIL- 1252
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + ++ MG K F I G PV S+SP
Sbjct: 1253 ---NGFMTPVSHPSLPFKAAPGQLSATEIR--RGLSLMGEIKKKRFAIFGNPVSVSRSPA 1307
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
L+N F+ G + L + S DF G S TIP K + DE+ A+
Sbjct: 1308 LHNTLFQQSGLPHEYTRLETSNAEDVKDFIRSPDFGGASVTIPLKLDIMPLLDEIAREAE 1367
Query: 331 SIGAVNCI--IRRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 387
IGAVN I + SD +L GYNTD+ G I ++ + GV A VV+
Sbjct: 1368 IIGAVNTIVPVNNGSDKTRLVGYNTDWQGMILSLRN---------AGVYGANKDASAVVV 1418
Query: 388 GAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD------------ 433
G GG +A + G + + + R+ + + + ET G+ + + D
Sbjct: 1419 GGGGTARAAIFALHNMGYSPIYVIGRSASKLQSMVETFPTGYNIRVVDSSEQIDTVPQVA 1478
Query: 434 ---LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ P D + + + + + I K ++ + Y P +T L++ A
Sbjct: 1479 IGTIPADRPIDPGMRETLCHMFERAQELDADIVKTGEKAPRVLLEMAYKPAVTALMQLAS 1538
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
++G + GLE+ +GQ + Q++ +TG+
Sbjct: 1539 DAGWLTIPGLEVLVGQGWYQFKHWTGI 1565
>gi|145577919|gb|ABP82678.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
wratislaviensis]
gi|145577933|gb|ABP82685.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
shandongiensis]
Length = 237
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 141/246 (57%), Gaps = 17/246 (6%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
+D +A+ IGAVN ++ + DGKL GYNTD +G + A++ ++S S L K
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SIS---SEPLQEKRI 108
Query: 385 VVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLA-DLENFNPEDG 442
+++GAGGA +A+ + G + + +ANRT D+A+EL S+A LE E G
Sbjct: 109 LLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEEQG 168
Query: 443 M--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
I+ TT+ GM P V+ TP+ +L +V D +Y P T++L EA+E GA I +G+
Sbjct: 169 NYDIIIQTTTRGMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQNGI 228
Query: 501 EMFIGQ 506
+MF+ Q
Sbjct: 229 DMFVYQ 234
>gi|408395815|gb|EKJ74988.1| hypothetical protein FPSE_04808 [Fusarium pseudograminearum CS3096]
Length = 1568
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 246/510 (48%), Gaps = 50/510 (9%)
Query: 40 VDMGKANASGADLVEIRLDGLKNFNPRENIK---TLIKESPVPTLFTYRPIWEGGQY-DG 95
VD+ G+D VE+R+D L++ + I+ TL + P +FT R +GG++ D
Sbjct: 1063 VDLLPEVVVGSDAVELRVDLLQDRSVDSVIRQVSTLRASAKKPIVFTLRTESQGGKFPDS 1122
Query: 96 DENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
E +++ RLA+ +G +YIDVE+ + E ++ + ++I S H+ + T S ++
Sbjct: 1123 AYEEGLELYRLAVRMGMEYIDVEMTLPDEIIKTVTESR-GYSRIIASHHDPKGTMSWKNA 1181
Query: 156 SNLVARIQA-SGADIVKF---ATTALDITDVARVFQITVHSQ-VPIIGLVMGERGLISRI 210
S + +A DI+K A T D D+AR +Q P+I + MG+ G +SR+
Sbjct: 1182 SWIQYYNRALQYGDIIKLVGIARTPEDNFDLARFKARMQEAQKTPMISMNMGKAGKLSRV 1241
Query: 211 LCAKFGGFLTFGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSP 269
L +F ++ L +APGQ + ++ L + P F + GKP+ S+SP
Sbjct: 1242 L-NRFLTPVSHPALP--FKAAPGQMSAAEIRQALALLGDLEPHN--FYLFGKPISASRSP 1296
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
L+N FK G + L D+I S DF G S TIP K + DE+ A
Sbjct: 1297 ALHNTLFKQTGLPHQYRRLETDNIEDVRDVLKSPDFGGASVTIPLKLDIMGKLDELSDAA 1356
Query: 330 KSIGAVNCII---RRQSDG--KLFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKL 383
++IGAVN ++ + +G +L G NTD+ G + A+ G++G+ + G +
Sbjct: 1357 RTIGAVNTVVPFGKPDDNGCRRLLGDNTDWRGMVHALRHAGIQGQDTDNKGAA------- 1409
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH----ALSLA-DLENF 437
+V+G+GG +A + + G + IA R ++A +A LS A D E
Sbjct: 1410 -MVVGSGGTTRAAIFALHSLGFGPIYIAARNQEKADAIAAEFPKEYQLEGLSKASDAEKV 1468
Query: 438 NPEDGMILANTTS-IGMQPKVDE-------TPIPKHALGHYALVFDAVYTPKITRLLREA 489
+ ++++ + + P + E P P G ++ + Y P T +++ A
Sbjct: 1469 SENLKVVISTIPADRPIDPTLQELVGAVLSRPAPD---GERRVLLEMAYKPSHTPIMQLA 1525
Query: 490 EESG--ATIVSGLEMFIGQAYEQYERFTGL 517
+++G ATI GLE+ Q + Q+E +TG+
Sbjct: 1526 DDAGNWATI-PGLEVLSSQGWYQFELWTGI 1554
>gi|332708016|ref|ZP_08428014.1| shikimate dehydrogenase [Moorea producens 3L]
gi|332353241|gb|EGJ32783.1| shikimate dehydrogenase [Moorea producens 3L]
Length = 291
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 33/285 (11%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDF 305
Q+ TK+ G+IG PV HS SP+++N+A S+G + V++ L V D+ + +
Sbjct: 3 QITGTTKLLGVIGDPVEHSLSPLMHNQAIASLGVDYVYLPLPVKSADLKNAIAGFEAIGL 62
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GFS TIPHK+ + E+ TVA+ +GAVN + R +D G NTD G I+ ++
Sbjct: 63 VGFSITIPHKQTIIPLLSEISTVAQGVGAVNTVYR--NDHGWIGTNTDIEGFITPLQ--- 117
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRA------- 417
G V++G GGA +A+ G G + + R D+
Sbjct: 118 --------GYDRDWTQTTVVILGCGGAARAVVVGCAELGCTEIHVVGRNQDKLGQFKESW 169
Query: 418 --RELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---A 471
+LA T+ HA L +L +L N T +GM P ++++P+ + A+ A
Sbjct: 170 INSDLAITIHTHAWEQLPELIG----QANLLVNATPVGMYPNIEQSPVDQLAMARLPENA 225
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +D +YTP T+ LR+A+E GA + GLEM + Q ++ + G
Sbjct: 226 IAYDLIYTPNPTQFLRQAKERGAIAIDGLEMLVQQGAAAFKIWLG 270
>gi|145577921|gb|ABP82679.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 142/249 (57%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKAAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A+ L V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V+ TP+ +L +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|145577917|gb|ABP82677.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
thompsoni]
Length = 238
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT ++A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|209524414|ref|ZP_03272963.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
gi|209495205|gb|EDZ95511.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
Length = 285
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 139/278 (50%), Gaps = 24/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI+G PV HS SPI++N A +G + V+V V D +A ++ + + GF+
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQGFNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D V +A ++GAVN + SD G NTD G ++ ++D LN
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTV--WYSDKGWSGTNTDVAGFLAPLKD-----LN 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +A+ G G A + I R + E ++ L
Sbjct: 119 FPN-----WHEKIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHSPL 173
Query: 430 SLA----DLENFNP--EDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP 480
+ + + NP + +L NTT +GM P +D +P+ L A+ +D +YTP
Sbjct: 174 PIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIYTP 233
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ TR L+ A+ GA + GLEM I Q E + P
Sbjct: 234 RPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQP 271
>gi|149183163|ref|ZP_01861612.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
gi|148849146|gb|EDL63347.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
Length = 277
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 20/270 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G+IG P+GHS SP+++N+AF+ G + + LV +DI K + GF+ TI
Sbjct: 4 LYGVIGNPIGHSMSPLMHNDAFQEKGIDSHYQPFLVKSEDIEKAVKALKVLGVQGFNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + DEVD +A++IGAVN ++R+ + G+NTD +G I ++E+
Sbjct: 64 PHKRAIMPLLDEVDPLAEAIGAVNTVVRKGD--RFIGFNTDGMGFIRSLEE--------- 112
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSL 431
L K ++IGAGGA +A+ Y A G + + I NRT ++ ++ + S
Sbjct: 113 -SCPFPLDNKAVLIIGAGGAARAIFYSMAASGIKNIDICNRTPEKGEDIIKDCPFPCTS- 170
Query: 432 ADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
A L E M I+ TTS+GM P+ + P+ + A + D +Y P T++++
Sbjct: 171 ASLSLQQAEQSMELYDIIVQTTSVGMHPETNAMPLNVTRIKEGAFISDIIYNPLETKIMK 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
G +G+ MF+ Q +E +TG+
Sbjct: 231 TFCALGGKGDNGIGMFVHQGALAFELWTGI 260
>gi|16801401|ref|NP_471669.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|16414861|emb|CAC97565.1| lin2338 [Listeria innocua Clip11262]
Length = 289
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 29/286 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K +K DE+ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 63 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
GV +AGK +IGAGGA A+ GA+ + I + Y++A++
Sbjct: 121 ---------GVD--VAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAKQT 169
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
++ H L D + E IL N T +GM P +ETP+ +
Sbjct: 170 IASIKQEVPDCIVHIYDLNDAAKLHEEIATSDILVNATLVGMHPHENETPVKDTTVFRKD 229
Query: 472 L-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L V D VY PK TRLL +AE +G+ + GL M + Q E Y+ FTG
Sbjct: 230 LIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTG 275
>gi|376007198|ref|ZP_09784399.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
gi|375324390|emb|CCE20152.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
Length = 285
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 139/278 (50%), Gaps = 24/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI+G PV HS SPI++N A +G + V+V V D +A ++ + + GF+
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQGFNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D V +A ++GAVN + SD G NTD G ++ ++D LN
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTV--WYSDQGWSGTNTDVAGFLAPLKD-----LN 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +A+ G G A + I R + E ++ L
Sbjct: 119 FPN-----WHEKIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHSPL 173
Query: 430 SLA----DLENFNP--EDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP 480
+ + + NP + +L NTT +GM P +D +P+ L A+ +D +YTP
Sbjct: 174 PIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIYTP 233
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ TR L+ A+ GA + GLEM I Q E + P
Sbjct: 234 RPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQP 271
>gi|282895773|ref|ZP_06303860.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
gi|281199273|gb|EFA74139.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
Length = 303
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 30/271 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ + D++ + ++S GF+
Sbjct: 16 TKIMGVIGYPVEHSLSPLMHNAALDHLGLDYVYLPFPIAPDNLQEAIACFASIGVVGFNV 75
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + ++ +A++IGAVN +IR K G NTD G I+ ++ +
Sbjct: 76 TIPHKQAIIPLLHDLSPIAQAIGAVNTVIRVGE--KWVGTNTDVAGFIAPLQSTYNQNWH 133
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K VVIG GGA KA+ G G + + R ++ ++ ++ L
Sbjct: 134 ----------EKKAVVIGNGGAAKAVVAGCIQLGMTEIHLVGRNIEKLKQFEQSWIDSTL 183
Query: 430 -----------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFD 475
S L P+ + L NTT IGM P +DE+P+ + H L +A+ +D
Sbjct: 184 ADKFTNKLKIHSWEKLPQLIPQSNL-LVNTTPIGMYPNIDESPVTEDQLHQLPSHAIAYD 242
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQ 506
+Y PK TR L A+ GA + GLEM + Q
Sbjct: 243 LIYIPKPTRFLELAQTQGAIALDGLEMLVQQ 273
>gi|257866088|ref|ZP_05645741.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257872419|ref|ZP_05652072.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
gi|257800022|gb|EEV29074.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257806583|gb|EEV35405.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
Length = 286
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 145/280 (51%), Gaps = 30/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ G + V++ V DD+A Q+ D G +
Sbjct: 6 TRLAALFAKPAKHSISPAMHNLSFEEQGTDAVYLAFDVEPDDLAASIQSIRQLDLLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE A+ IGA+N I+ ++ G+L G+NTD +G + A+ED
Sbjct: 66 SMPHKMAAVALMDECSPAAELIGAINTIVNQE--GRLIGHNTDGIGFMRALED------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT-------YDRARELAE 422
+ ++ G VIGAGGA A+ A G + + + NR ++ ++A+
Sbjct: 117 ----IQVSILGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEKLTQIAQ 172
Query: 423 TVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
++L DLE+ + +L N T +GM+P E+P+ L +L V+D
Sbjct: 173 KTACE-ITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTESPLKDKTLLRESLAVYDV 231
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y P+ T+LL++A+ GA +GL M + Q +E +TG
Sbjct: 232 IYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTG 271
>gi|423063524|ref|ZP_17052314.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
gi|406714956|gb|EKD10114.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 138/278 (49%), Gaps = 24/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI+G PV HS SPI++N A +G + V+V V D +A ++ + + GF+
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVTPDQLASAYRGFQAIGVQGFNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D V +A ++GAVN + SD G NTD G ++ ++D LN
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTV--WYSDKGWSGTNTDVAGFLAPLKD-----LN 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +A+ G G A + I R + E ++ L
Sbjct: 119 FPN-----WHEKIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQSWLHSPL 173
Query: 430 SLA----DLENFNP--EDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP 480
+ + + NP +L NTT +GM P +D +P+ L A+ +D +YTP
Sbjct: 174 PIKVNVHNWQELNPLIRQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIYTP 233
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ TR L+ A+ GA + GLEM I Q E + P
Sbjct: 234 RPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQP 271
>gi|158523119|ref|YP_001530989.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511945|gb|ABW68912.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 23/277 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS-NDFAGFSCT 311
T++ +IG PV HS SP ++N AF + N V+V V+D+ + +F G S T
Sbjct: 8 TRLCAVIGNPVEHSLSPAIHNAAFAARNLNFVYVAFRVNDVGPALAGMRALENFRGMSIT 67
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK +A+ DE+ + +++GA+N ++ + G+L G NTD GA+ A+++
Sbjct: 68 IPHKISAIGHVDEITDLDRAMGAINTVVNEK--GRLTGSNTDGPGALKALKNA------- 118
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAY--GAKAKGARVVIANRTYDRARELAETV--GGH 427
GV ++ GK +++GAGG +A+A+ +A A +V+ + +L+ + G
Sbjct: 119 --GVETS--GKTVLMLGAGGVARAIAFTLAWQADIAELVLLDIDSALREQLSSDLKNGTS 174
Query: 428 A-LSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
A ++ A EN M I+ + T +GM PK D + +P VFD VY P
Sbjct: 175 ATITAAGFENKALAHAMARADIVIHCTPVGMHPKTDASLVPPDLFRPGMAVFDVVYNPLE 234
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
T+LL EA G VSG+E+F+ QA Q+E+FTG G
Sbjct: 235 TKLLTEAAAFGLKTVSGVELFVNQAVLQFEKFTGETG 271
>gi|75761259|ref|ZP_00741241.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491241|gb|EAO54475.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 229
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 139/234 (59%), Gaps = 20/234 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP+++N AF+ + N + LV++ + + + + +GF+ T
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
PHK A ++ DE+D +A+ IGAVN ++ + +G+L GYNTD +G + A++ ++
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQ-------SI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
S L GK +++GAGGA +A+ + G + + +ANRT D+A+EL A T ++
Sbjct: 114 S---HEPLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNS 170
Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
++L+ LE E G I+ TT+IGM P V+ TP+ +L +V D +Y P
Sbjct: 171 VALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNP 223
>gi|398307025|ref|ZP_10510611.1| shikimate 5-dehydrogenase [Bacillus vallismortis DV1-F-3]
Length = 280
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 147/270 (54%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGYYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMNYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ A+ + I NRT ++A++L E+
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIARDIPKKFDICNRTLEKAKQLTESAPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P V++ P+ A+V D VY P T LL
Sbjct: 171 EVLSMTEAEK-RLEQYDVIIHTTSVGMYPNVEDAPLSLQHAASCAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA ++G + G+ MF+ QA ++ +TG
Sbjct: 230 KEANQNGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|145577909|gb|ABP82673.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar higo]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +A+ IGAVN ++ + DG+L GYNTD +G + A++ ++S + L GK
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQ-------SIS---NEPLQGKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHALSLADLENFNPE 440
+++G+GGA +A+ + G + + +ANRT ++A+EL A T ++++L+ LE E
Sbjct: 109 ILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALS-LEKATEE 167
Query: 441 DGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
G I+ TT+IGM P V+ TP+ +L +V D +Y P T++L EA+E GA I +
Sbjct: 168 QGNYDIIIQTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|417907932|ref|ZP_12551699.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
gi|341595019|gb|EGS37697.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
Length = 269
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 140/264 (53%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SPI+++ F ++ N + + + +D+ + +GF+ TIP
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + EVD +K++GAVN ++ R DGK GYNTD +G ++ ++
Sbjct: 63 HKERIIPYLYEVDEQSKTVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ L +++GAGGA K +A K ++ IANRT R + + +A+SL
Sbjct: 111 -IYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAISLN 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM K +++ I L + LV D VY P T +L EAE
Sbjct: 168 DAEKYLDEFDIVI-NTTPAGMD-KNNDSVINLRNLSPHTLVSDIVYIPYKTPILLEAESK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +TG
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTG 249
>gi|320536898|ref|ZP_08036890.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
gi|320146254|gb|EFW37878.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
Length = 496
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 229/522 (43%), Gaps = 70/522 (13%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESP----VPTL 81
IC+ + ++++K +V + K S D+ E+R D L+ P+E + LI+ P +P +
Sbjct: 5 ICLVLTEDTIEKNLVLVQKYR-SLIDIAELRADFLQ---PQEVL--LIRRFPELAGIPVI 58
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGA-------DYIDVE--------LQVAREFN 126
T R +GG++ E RV + + YID+E + AR FN
Sbjct: 59 LTVRRRIDGGRFTAGEATRVTIFARGLAFSDPDPAKNFSYIDLEGDLQAPSIEEAARAFN 118
Query: 127 DSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF 186
+I K Y + ++ D+ + +++ S +IVK A A ++DV +F
Sbjct: 119 ITIIRSK------------YNHKKAITDIDAEIQQVRRSDDEIVKIAYKANSLSDVTNLF 166
Query: 187 QITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVS-APGQPTIKDLLDLYN 245
+ H + I + MG G+ SR+L + +T+ + PG L+ LY
Sbjct: 167 RFANHERGRCILVAMGAYGVPSRLLAGRLNSEITYVMPQEKTSEFIPGLIDPFSLVYLYR 226
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL---LVDDIAKFFQTYSS 302
F+Q+ TK+FG++G V S P ++N+A+ N V++ + + +D+ +F +
Sbjct: 227 FKQINEKTKIFGVVGSDVSESLGPQMHNKAYAKQNINAVYIPINARVSEDVIEFAEVAG- 285
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
+G S P K+ V +E +I A N + S+G +NTD A++
Sbjct: 286 --VSGLSIDHPFKKPIVSSMNECSKTTTAIRAANTAV--YSNGSWKAFNTDVESFSKALQ 341
Query: 363 DGLRG---RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE 419
+ L+ R N + + A + GKA I NRT ++A++
Sbjct: 342 EFLQVKNLRFNRVAIIGAGGAAQAVAYAVKQLHGKA------------CIFNRTVEKAKQ 389
Query: 420 LAETVGGHALSLAD-----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+A LA LE ++ I+ TT++G + E P+ + VF
Sbjct: 390 IALPYRFKWAILAPASVKLLEKYSS----IIIQTTTVGNSFSLAEDPLFFYTFTGKEAVF 445
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D Y P+ T LL AEE+G I +G M Q Y Q++ FTG
Sbjct: 446 DLNYKPEKTALLTHAEEAGCKITNGYRMLEYQTYRQFKIFTG 487
>gi|145577937|gb|ABP82687.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar bolivia]
gi|145577943|gb|ABP82690.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 142/249 (57%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A+ L V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V+ TP+ +L +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|312621914|ref|YP_004023527.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
gi|312202381|gb|ADQ45708.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
Length = 288
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 23/261 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYSSNDFAGFSCTIP 313
+IGK + HS SP ++N + ++ +L + D K + D GF+ TIP
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEKLKEFVEMVRKDEDVVGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE +K CDEV + I A N + ++ + KL YNTD++G ++ED
Sbjct: 66 YKEDILKFCDEVSEDVRIIKAANTV--KKENEKLLAYNTDWIGFKRSLED---------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLA 432
+ + K +V+G+GGA KA YG GA V +ANRTY++A L ET + L +
Sbjct: 114 -MEVDVKDKKILVLGSGGAAKACIYGLYRMGAEEVFVANRTYEKAESLKETFQ-NILKIV 171
Query: 433 DLENFNPEDGM--ILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITRLLRE 488
+E + I+ NTTS+GM P ++ +P + G V+D +Y P T L+E
Sbjct: 172 PVEWIRRYEFKYDIIINTTSVGMFPNIESSPFDFENYVAGIPVFVYDMIYNPLKTAFLKE 231
Query: 489 AEESGATIVSGLEMFIGQAYE 509
AE+ G I +GL+M + QA E
Sbjct: 232 AEKKGIKIENGLKMLVYQAIE 252
>gi|302418918|ref|XP_003007290.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
gi|327507675|sp|C9SE96.1|ARO1_VERA1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|261354892|gb|EEY17320.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
Length = 1574
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 229/516 (44%), Gaps = 51/516 (9%)
Query: 34 SVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEG 90
SVD VD+ G+D VE+R+D L++ P + L + +P +FT R + +G
Sbjct: 1057 SVDS-AVDVIPQVVVGSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQG 1115
Query: 91 GQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT 149
G + D D + + + LA+ +G ++ID+E+ ++ K + ++I S H+ +
Sbjct: 1116 GCFPDADHTQALSLYILALRMGVEFIDLEMTWPEHILQTVTNLK-GRSRIIASHHDPRGE 1174
Query: 150 PSVED--LSNLVARIQASGADIVKFATTAL---DITDVARVFQITVHSQ-VPIIGLVMGE 203
S ++ + R G+ ++K TA D D+AR + S P+I L MG
Sbjct: 1175 LSWKNGSWTPFYNRALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPVIALNMGA 1233
Query: 204 RGLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
G +SR+L GFLT +APGQ + ++ F + + F + GKP
Sbjct: 1234 LGKLSRVL----NGFLTPVSHPALPFKAAPGQLSAAEIRRAL-FLLGNINAQSFHLFGKP 1288
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
+ S+SP L+N F G + + D + DF G S TIP K +
Sbjct: 1289 ISKSRSPALHNSLFNLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLL 1348
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
DEV AK IGAVN II DG +L G NTD+ G + +E + V+ +++
Sbjct: 1349 DEVSESAKVIGAVNTIIPMPLDGSQKRRLLGDNTDWRGMVHCLES-----IGVASESTAS 1403
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF- 437
+VIG+GG +A + K+ G + R + ET+ + DL
Sbjct: 1404 TTTASALVIGSGGTTRAAIFALKSHGYHPIY---MLARNEQSLETIRASFPTDFDLRALG 1460
Query: 438 NPEDGMILANTTSI---------GMQPKVDET-------PIPKHALGHYALVFDAVYTPK 481
P + LA ++ M P + ET P+ + ++ + Y P+
Sbjct: 1461 GPAEVFTLAVAPTVVISTIPADKPMDPSLRETLEVVLKSPVSEQ---RTRVLLEMAYQPR 1517
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T +R AE++G + G E+ Q + Q++ +TG+
Sbjct: 1518 HTAAMRLAEDAGWRTIPGAEVLAAQGWHQFQMWTGI 1553
>gi|240103652|ref|YP_002959961.1| shikimate 5-dehydrogenase [Thermococcus gammatolerans EJ3]
gi|239911206|gb|ACS34097.1| Shikimate 5-dehydrogenase (aroE) [Thermococcus gammatolerans EJ3]
Length = 272
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 149/271 (54%), Gaps = 22/271 (8%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
M +T+++G+IG P HS SP ++N AF+ +G N V++ V + +
Sbjct: 1 MDAETRLYGLIGFPARHSLSPAMHNAAFRELGMNAVYLAFEVAPERLKMAVDGVRGLGIH 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+PHK ++ D + A+ IG+VN I+ +DG+L GYNTD VGA A+E
Sbjct: 61 GLNVTMPHKTTVIEHLDGLSGEAEEIGSVNTIV---NDGELIGYNTDGVGARRALE---- 113
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVG 425
+ ++L GK ++IGAGGAG+A+AY A +K + VV+ NRT ++AR L V
Sbjct: 114 --------MVTSLRGKNVLIIGAGGAGRAIAY-ALSKVSEVVVLNRTPEKARALERFGVT 164
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
G L+ +L + + +L N T +GM DE+P+P L +V D VY P TRL
Sbjct: 165 GDRLTPENLRRY-LANADVLINATPVGMNS--DESPVPAELLREGLVVMDIVYKPLKTRL 221
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LREAE G V GL M + Q E + +TG
Sbjct: 222 LREAERRGCVTVDGLWMLVHQGAESFRLWTG 252
>gi|336406804|ref|ZP_08587451.1| hypothetical protein HMPREF0127_04764 [Bacteroides sp. 1_1_30]
gi|295086799|emb|CBK68322.1| shikimate dehydrogenase [Bacteroides xylanisolvens XB1A]
gi|335933166|gb|EGM95176.1| hypothetical protein HMPREF0127_04764 [Bacteroides sp. 1_1_30]
Length = 248
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESIFVSRTHK------------ADDM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N+T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTVIVNSTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|389853036|ref|YP_006355270.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
gi|388250342|gb|AFK23195.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
Length = 273
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 155/272 (56%), Gaps = 21/272 (7%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
M +TKV+ +IGKPV HS SP+++N FK G N V+V V + + + A
Sbjct: 1 MNGETKVYAVIGKPVRHSLSPVMHNALFKKYGINAVYVAFEVFPEQLRDAILGVRALGIA 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+PHKE ++ D+V +K+I +VN +I S+G+L GY TD GA A+E
Sbjct: 61 GLNVTMPHKEKIIEYLDKVSPDSKAISSVNTVI--NSNGELIGYTTDGTGARKALER--- 115
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVG 425
+ + G +++GAGGAGKA+AY AK + VV+ NRT ++AR L + +
Sbjct: 116 ---------FTNVEGSRVLILGAGGAGKAIAYEL-AKYSDVVVLNRTPEKARALEKFGIK 165
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
G AL++ +L ++ E IL N TS+GM E+ +PK L +V D VY P T+L
Sbjct: 166 GDALTMENL-SYYIEWADILINATSVGMGKY--ESLVPKELLREGLVVMDIVYKPIKTKL 222
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L++AE++G V GL M + Q E ++ +TG+
Sbjct: 223 LKDAEKAGCLTVDGLWMLVYQGAESFKLWTGI 254
>gi|346976957|gb|EGY20409.1| pentafunctional AROM polypeptide [Verticillium dahliae VdLs.17]
Length = 1574
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 227/517 (43%), Gaps = 53/517 (10%)
Query: 34 SVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEG 90
SVD VD+ G+D VE+R+D L++ P + L + +P +FT R + +G
Sbjct: 1057 SVDS-AVDVIPQVVVGSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQG 1115
Query: 91 GQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYT 149
G++ D D + + + LA+ +G ++ID+E+ ++ K + ++I S H+ +
Sbjct: 1116 GRFPDEDHTQALSLYILALRMGVEFIDLEMTWPEHILQTVTNLK-GRSRIIASHHDPRGV 1174
Query: 150 PSVED--LSNLVARIQASGADIVKFATTAL---DITDVARVFQITVHSQ-VPIIGLVMGE 203
S ++ + R G+ ++K TA D D+AR + S PII L MG
Sbjct: 1175 LSWKNGSWTPFYNRALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPIIALNMGA 1233
Query: 204 RGLISRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
G +SR+L GFLT +APGQ + ++ F D + F + GKP
Sbjct: 1234 LGKLSRVL----NGFLTPVSHPALPFKAAPGQLSAAEIRRAL-FLLGNIDAQSFYLFGKP 1288
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322
+ S+SP L+N F G + + D + DF G S TIP K +
Sbjct: 1289 ISKSRSPALHNSLFDLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLL 1348
Query: 323 DEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIED-GLRGRLNVSGGVSS 377
D+V AK IGAVN II DG +L G NTD+ G + +E G+ +S
Sbjct: 1349 DQVSESAKVIGAVNTIIPIPLDGSQKRRLLGDNTDWRGMVHCLESIGVASESTAGTTTAS 1408
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
AL VIG+GG +A + K+ G + R + ET+ + DL
Sbjct: 1409 AL------VIGSGGTTRAAIFALKSHGYHPIY---MLARNEQSLETIRASFPADFDLRAL 1459
Query: 438 -NPEDGMILANTTSI---------GMQPKVDET-------PIPKHALGHYALVFDAVYTP 480
P + LA ++ M P + ET P+ ++ + Y P
Sbjct: 1460 GGPAEASALAVAPTVVISTIPADKPMDPSLRETLEVVLKSPVSDE---RTRVLLEMAYQP 1516
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ T +R AE++G + G E+ Q + Q++ +T +
Sbjct: 1517 RHTAAMRLAEDAGWRTIPGAEVLAAQGWHQFQMWTDI 1553
>gi|327507647|sp|C6HCG7.1|ARO1_AJECH RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240278751|gb|EER42257.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus H143]
Length = 1595
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 234/521 (44%), Gaps = 74/521 (14%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1135
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIIASHHDPKGQLSWVNGSW 1194
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A I D + + ++ VPII + MG++G +SR+L
Sbjct: 1195 IQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML- 1253
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ +G K F +IG PV S+SP
Sbjct: 1254 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLIGEIKAKKFAVIGNPVSASRSPA 1308
Query: 271 LYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
++N F+ +G + L D ++AK F S DF G S TIP K + + DE+
Sbjct: 1309 MHNTLFRQMGLPHTYGTLETDNPEVAKEF--IRSPDFGGASVTIPLKLSIMPLLDEIAPE 1366
Query: 329 AKSIGAVNCII--RRQSDGK-----LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
A SIGAVN I+ DGK L G+NTD+ G + + D S+ L
Sbjct: 1367 AMSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAGL-- 1424
Query: 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNP 439
VIG GG +A + + G + + + R+ D+ + T H + + LE+
Sbjct: 1425 ----VIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRI--LEDLKA 1478
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD-----------------------A 476
+ + T +IG P + PI H +FD
Sbjct: 1479 LESL---PTVAIGTIP--GDKPIEPHMREILCRLFDLCEKANSDTEQARGVSTKRILLEM 1533
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1534 AYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNI 1574
>gi|261200843|ref|XP_002626822.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
gi|327507650|sp|C5JKE6.1|ARO1_AJEDS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239593894|gb|EEQ76475.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
Length = 1597
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 237/522 (45%), Gaps = 76/522 (14%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIIASHHDPKGELSWANGSW 1194
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VPII + MG++G +SR+L
Sbjct: 1195 IQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML- 1253
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ + +G +K F +IG PV S+SP
Sbjct: 1254 ---NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSL--IGEIKSKKFAVIGNPVSASRSPA 1308
Query: 271 LYNEAFKSVGFNGVFVHLLVDD---IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
++N F+ +G + L +D + KF + S DF G S TIP K + DE+
Sbjct: 1309 MHNALFRQMGLPHTYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAP 1365
Query: 328 VAKSIGAVNCII------RRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
A SIGAVN I+ QS +L G NTD+ G + + D S+ L
Sbjct: 1366 EAVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDAGAYPAATPTTTSAGL- 1424
Query: 381 GKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHALSLADLENFN 438
VIG GG +A + ++ G + + + R+ D+ + T H + + LE+
Sbjct: 1425 -----VIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDIRI--LEDVK 1477
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKH-----------------------ALGHYALVFD 475
+ + T +IG P + PI H + ++ +
Sbjct: 1478 ALESL---PTVAIGTIP--GDKPIEPHMREVLCELFDLCEKANSDAEQARGISTKRILLE 1532
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1533 MAYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTDI 1574
>gi|255693616|ref|ZP_05417291.1| shikimate dehydrogenase [Bacteroides finegoldii DSM 17565]
gi|260620592|gb|EEX43463.1| putative shikimate dehydrogenase [Bacteroides finegoldii DSM 17565]
Length = 248
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGIDAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFSQSIQPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G V +RT+ A ++
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESVFVSRTHK------------ADNM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + I+ NTT +GM PKVD P IP + + L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEHTIIVNTTPVGMFPKVDFCPNIPYNLVTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|417656004|ref|ZP_12305695.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|418665234|ref|ZP_13226684.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|420163035|ref|ZP_14669782.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|420167992|ref|ZP_14674644.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
gi|329737254|gb|EGG73508.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|374409209|gb|EHQ80009.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|394234724|gb|EJD80298.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|394238020|gb|EJD83506.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
Length = 269
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L+EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILKEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|298482189|ref|ZP_07000377.1| shikimate dehydrogenase [Bacteroides sp. D22]
gi|298271746|gb|EFI13319.1| shikimate dehydrogenase [Bacteroides sp. D22]
Length = 248
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESIFVSRTHK------------ADDM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N+T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTVIVNSTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|422416778|ref|ZP_16493735.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
gi|313622721|gb|EFR93071.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
Length = 289
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 29/286 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K +K D++ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
GV +AGK +IGAGGA A+ GA+ + I + Y++A++
Sbjct: 121 ---------GVD--VAGKKMTIIGAGGAATAIQVQCALDGAQEITIFNIKDDFYEKAKQT 169
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
++ H L D + E IL N T +GM P +ETP+ +
Sbjct: 170 IASIKQEVPDCIVHIYDLNDTAKLHEEIATSDILVNATLVGMHPHENETPVKDTTVFRKD 229
Query: 472 L-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L V D VY PK TRLL +AE +G+ V GL M + Q E Y+ FTG
Sbjct: 230 LIVTDVVYNPKKTRLLLDAEAAGSKTVGGLGMLLWQGAEAYKLFTG 275
>gi|427727930|ref|YP_007074167.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
gi|427363849|gb|AFY46570.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
Length = 292
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 138/268 (51%), Gaps = 28/268 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + +++ + +++ ++ D GFS
Sbjct: 6 TKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYIYLPFPIKPENLEVAIAGLAAIDVVGFSV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ +A++IGAVN + R + + G NTD G IS ++ +
Sbjct: 66 TIPHKQAIIPLLAEISPIAQAIGAVNTVTRH--NNQWVGTNTDIEGFISPLQTTYQ---- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ K V++G GGA +A+ G G A + + R R +E + +
Sbjct: 120 ------QDWSQKTAVILGNGGAARAVVAGCYQLGFAEIHVIGRNPQRLKEFQHS--WESS 171
Query: 430 SLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVY 478
+AD +P D + +L NTT IGM P VDE+P+ + + A+ +D +Y
Sbjct: 172 PIADNLQVHPWDNLAKLIPEANLLVNTTPIGMYPHVDESPVSVEEMANLQTGAIAYDLIY 231
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQ 506
P+ T+ L+ A++ GA + GLEM + Q
Sbjct: 232 IPQPTKFLQYAQQQGAIAIDGLEMLVQQ 259
>gi|449102531|ref|ZP_21739279.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
gi|448966120|gb|EMB46778.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
Length = 493
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 228/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELGAD-------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + + YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ + + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKAIEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGA+N ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAINTLV--SENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P + P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|42527148|ref|NP_972246.1| 3-dehydroquinate dehydratase [Treponema denticola ATCC 35405]
gi|449111792|ref|ZP_21748361.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|449113401|ref|ZP_21749906.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
gi|41817572|gb|AAS12157.1| 3-dehydroquinate dehydratase, type 1, putative/shikimate
5-dehydrogenase, putative [Treponema denticola ATCC
35405]
gi|448957063|gb|EMB37816.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|448959611|gb|EMB40330.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
Length = 493
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 229/522 (43%), Gaps = 64/522 (12%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 3 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 60
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + AD YID+E + AR F+
Sbjct: 61 VRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAFD-- 118
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 188
K+I S H+ V+++ V + DI K A TA + DV+ +F+
Sbjct: 119 --------IKIIRSLHS---KVPVKNIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKA 167
Query: 189 T--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---LLDL 243
+ + +Q I+ VMG GL SRIL K + + I + + D L +L
Sbjct: 168 SKLIKNQEYILS-VMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQELIDPETLEEL 226
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN 303
Y F ++ +T ++G+IGK V S SP ++N+ FK N V++ + + +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-- 361
G S T P K + + + +K IGAVN ++ + K FGYNTD G A+
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALME 344
Query: 362 ---EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR 418
E LR G A V+ G + I NRT ++A+
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 419 ELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYALVF 474
+AE + A L+ N + ++ TT+ GM+P + P+ + VF
Sbjct: 391 NIAEK---YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKEKVF 447
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 448 ELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 489
>gi|409994164|ref|ZP_11277283.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
gi|409934994|gb|EKN76539.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
Length = 285
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 24/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI+G PV HS SPI++N A +G + V+V V D +A ++ + + GF+
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQGFNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D V +A ++GAVN + SD G NTD G ++ ++ R +
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTV--WYSDKGWSGTNTDVAGFLAPLKALNRPNWH 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +A+ G G A + I R + E ++ L
Sbjct: 124 ----------EKIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQSWLNSPL 173
Query: 430 SLA----DLENFNP--EDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP 480
+ + + NP + +L NTT +GM P +D +P+ L A+ +D +YTP
Sbjct: 174 PIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIYTP 233
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ TR L+ A+ GA + GLEM I Q E + P
Sbjct: 234 RPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQP 271
>gi|327507666|sp|C1FYJ9.1|ARO1_PARBD RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226289074|gb|EEH44586.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb18]
Length = 1538
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 236/512 (46%), Gaps = 56/512 (10%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L VP +FT R +GG++ D
Sbjct: 994 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQGGRFPDDAY 1053
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+EL + ++ K K+I S H+ + S + S
Sbjct: 1054 DAALQLYRLAIRMGSEFVDLELSFPEQLLRTVTEMK-GFSKIIASHHDPEGLLSWANGSW 1112
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VP+I + MG +G +SRIL
Sbjct: 1113 IQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMGYKGQLSRIL- 1171
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ MG K F +IGKPV S+SP
Sbjct: 1172 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLMGEIKAKKFAVIGKPVSSSRSPA 1226
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
++N FK +G + + D++ + S DF G S TIP K + DE+ A+
Sbjct: 1227 MHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLLDEIAPEAE 1286
Query: 331 SIGAVNCIIR-------RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
IGAVN I+ + +L G NTD+ G + + D G + + +S+ AG
Sbjct: 1287 MIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA--GAYSAATPTTSS-AG-- 1341
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD----LENF 437
++IG GG +A + + + + I R+ ++ +A + + + + D LE+
Sbjct: 1342 -LIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNIRIVDDVKALESL 1400
Query: 438 N-------PEDGMILANTTSI-----GMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
P D I + + + K + K + ++ + Y P +T L
Sbjct: 1401 PMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRILLEMAYKPSVTSL 1460
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++ A ++G T++ GLE+ + Q Q E +T +
Sbjct: 1461 MKLASDAGWTVLPGLEVLVAQGVYQSEYWTDI 1492
>gi|327351195|gb|EGE80052.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 1597
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 239/519 (46%), Gaps = 70/519 (13%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIIASHHDPKGELSWANGSW 1194
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VPII + MG++G +SR+L
Sbjct: 1195 IQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML- 1253
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ + +G +K F +IG PV S+SP
Sbjct: 1254 ---NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSL--IGEIKSKKFAVIGNPVSASRSPA 1308
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
++N F+ +G + L +D + S DF G S TIP K + DE+ A
Sbjct: 1309 MHNALFRQMGLPHTYGTLETEDPEIVKKFIRSPDFGGASITIPLKLDIMPLLDEIAPEAV 1368
Query: 331 SIGAVNCII------RRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
SIGAVN I+ QS +L G NTD+ G + + D G + +++ AG
Sbjct: 1369 SIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--GAYPAATPTTTS-AG-- 1423
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHALSLADLENFNPED 441
+VIG GG +A + ++ G + + + R+ D+ + T H + + LE+ +
Sbjct: 1424 -LVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMMSTFAPDHDIRI--LEDVKALE 1480
Query: 442 GMILANTTSIGMQPKVDETPIPKH-----------------------ALGHYALVFDAVY 478
+ T +IG P + PI H + ++ + Y
Sbjct: 1481 SL---PTVAIGTIP--GDKPIEPHMREVLCELFDLCEKANSDAEQARGISTKRILLEMAY 1535
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1536 KPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTDI 1574
>gi|301057611|ref|ZP_07198691.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
gi|300448335|gb|EFK12020.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
Length = 272
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 144/264 (54%), Gaps = 17/264 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
K++G++G PVGHS SP ++N AF+++ + D+ + + +G S TIP
Sbjct: 7 KIYGVLGNPVGHSLSPAMHNAAFEALDIPSFYGAFKTTDLKGCIRGMRALGISGMSITIP 66
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
K + D +D +A+ IGAVN I+ +G L GYNTD GA+ A+E +
Sbjct: 67 FKTDVMAYLDALDPLAEQIGAVNTIV--NENGLLRGYNTDGAGAMKALEAVVDP------ 118
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
GK V++GAGGA + + + A G ++ ++NR+ +R R LA+ + + L++
Sbjct: 119 ------VGKRCVLVGAGGAARGIGFMAVKNGMKLTVSNRSENRGRTLADFLECPFVPLSE 172
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
+++ + + +L TT +GM P+ + +P+ +V DAVY P T++L++A G
Sbjct: 173 IKSLDTD---VLIQTTPVGMFPRENASPVSADMFREGMVVMDAVYNPMETKMLKDARSRG 229
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
+ GLEMFI Q Q++ +TGL
Sbjct: 230 CETIGGLEMFIHQGALQFQLWTGL 253
>gi|388854816|emb|CCF51497.1| probable ARO1-Pentafunctional AROM polypeptide [Ustilago hordei]
Length = 1708
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 245/533 (45%), Gaps = 78/533 (14%)
Query: 40 VDMGKANASGADLVEIRLDGLKNFNP----------------RENIKTLIKESPVPTLFT 83
+++ ++ SGAD +E R D L NP R + L + +P +FT
Sbjct: 1179 LELIRSMESGADALEFRADLL---NPSGQPVTTPQVPPNDFVRNQLAALRHRTSLPIVFT 1235
Query: 84 YRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE---KCKV 139
R +GG + D + E D++ LA+ G +YID+EL F+DS+ E ++
Sbjct: 1236 VRTHSQGGMFPDNHQKEYFDLISLALRHGCEYIDLELG----FDDSLLTAVVEAKANSQI 1291
Query: 140 IVSSHNYQYTPSVE-DLSNLVARIQASGADIVKFATTALDITDVARV----FQITVHSQV 194
I S H++ E D + + DI K A + D + +++ +
Sbjct: 1292 IASHHDWSGNLDWESDTTAAIYTRACQFGDIAKIIGKANSMEDNYSLERFRAKVSASATK 1351
Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTK 254
P++ + MG G SR++ F +T T+ + +APGQ T + + +G T
Sbjct: 1352 PLLAVNMGAAGQFSRVVNPVFTP-ITHETMP--VKAAPGQLTFRQIQTALAL--IGQTTA 1406
Query: 255 V-FGIIGKPVGHSKSPILYNEAFKSVGFNG---VFVHLLVDD-IAKFFQTYSSNDFAGFS 309
+ F + G P+ HS SP+L+N AF ++G +F VDD IA + + S DF G S
Sbjct: 1407 LKFALFGSPISHSLSPVLHNTAFGALGLPHHYELFETAEVDDAIAAYVR---SGDFGGAS 1463
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIR-RQSDGK---LFGYNTDYVGAISAIEDGL 365
TIPHK A +K D+V AK+IGAVN +I R ++GK L G NTD++ AIE
Sbjct: 1464 VTIPHKLAIIKYLDQVSDEAKAIGAVNTVIPIRDAEGKVTALLGDNTDWI----AIETLA 1519
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
R L L G +VIGAGG+ +A + G ++++ NRT A LA+ V
Sbjct: 1520 RRSLRTVHLADPNLTG---LVIGAGGSARAALFALYRLGVKKILLFNRTLANAENLAKQV 1576
Query: 425 GGH-----ALSLADLENFNPE--DGMILANTTSIG--MQPKVDE-TPIPKHALGHYA--L 472
SL ++ + E ++++N + G + P +P L + A +
Sbjct: 1577 PVEWNVQVLTSLDEIGSLPAELAPSVVVSNIPAEGATLDPNAQGLIHLPVGILKNPAGGV 1636
Query: 473 VFDAVYTPKITRLLREAEESGATI---------VSGLEMFIGQAYEQYERFTG 516
V D Y P T LL+ A++ + + G+ + + Q Q+ R++G
Sbjct: 1637 VIDMSYRPYSTSLLQLAQQVNTAVAAGKKLWSAIPGITILLEQGCHQFLRWSG 1689
>gi|147669087|ref|YP_001213905.1| shikimate 5-dehydrogenase [Dehalococcoides sp. BAV1]
gi|189046312|sp|A5FRZ5.1|AROE_DEHSB RecName: Full=Shikimate dehydrogenase
gi|146270035|gb|ABQ17027.1| shikimate dehydrogenase [Dehalococcoides sp. BAV1]
Length = 286
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 141/278 (50%), Gaps = 25/278 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
Q PD +FGIIG PV HS SP + N AFK N +++ + +D+ + +
Sbjct: 2 QTIPDA-LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNI 60
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + TIPHK +K D +D AK IGAVN I+ +G++ GYNTD+ G + +E
Sbjct: 61 RGLNVTIPHKIEVIKYIDTLDPAAKKIGAVNTIV--NENGQMKGYNTDFGGFVRLLE--- 115
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV- 424
R+ A A F ++GAGG+ A++ G + + R ++A++LA +
Sbjct: 116 HNRI--------APAKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMC 167
Query: 425 -------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
G L+ A+LE E +I+ N T IGM ++ I L V DA+
Sbjct: 168 LRFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLISPRLLRPDLTVIDAI 226
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P TRLL +AE+ GA I++GLEM + Q +E +T
Sbjct: 227 YNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWT 264
>gi|82751198|ref|YP_416939.1| shikimate 5-dehydrogenase [Staphylococcus aureus RF122]
gi|123547838|sp|Q2YT32.1|AROE_STAAB RecName: Full=Shikimate dehydrogenase
gi|82656729|emb|CAI81157.1| shikimate 5-dehydrogenase [Staphylococcus aureus RF122]
Length = 268
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 142/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFLKLKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D EN+ E +++ NTT GM +E+ I L L+ D +Y P T +L EAE
Sbjct: 168 DAENYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIIYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|423294986|ref|ZP_17273113.1| shikimate 5-dehydrogenase [Bacteroides ovatus CL03T12C18]
gi|392674566|gb|EIY68012.1| shikimate 5-dehydrogenase [Bacteroides ovatus CL03T12C18]
Length = 248
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQQKGKVKLVGYNSDIIGFTQSIQPLLQPHHQK 123
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 124 A------------LILGTGGASKAVYHGLKNLGLESIFVSRTHK------------ADDM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + I+ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTIIVNCTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|160887051|ref|ZP_02068054.1| hypothetical protein BACOVA_05065 [Bacteroides ovatus ATCC 8483]
gi|156107462|gb|EDO09207.1| putative shikimate dehydrogenase [Bacteroides ovatus ATCC 8483]
Length = 250
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 6 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 65
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 66 KEQVIPFLDELDRDTAKIGAVNVIKIIRQQKGKVKLVGYNSDIIGFTQSIQPLLQPHHQK 125
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 126 A------------LILGTGGASKAVYHGLKNLGIESIFVSRTHK------------ADDM 161
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + I+ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 162 LTYEELTPEIMAEYTIIVNCTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 221
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 222 KGEAQGAVVKNGLEMLLLQAFAAWE 246
>gi|402571542|ref|YP_006620885.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402252739|gb|AFQ43014.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 279
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HS SP ++N ++++G N + V++ + + + + FAG++ T
Sbjct: 3 KQFAVIGNPIKHSLSPAMHNAGYETLGINAEYQRFRVEEHCLEEAVKGLRALGFAGWNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHKEA V D + A+ GAVN + + +G+L G+NTD G + ++E+ LRG
Sbjct: 63 LPHKEAIVSFMDTLTPEAEKAGAVNTV--KNQNGRLIGHNTDGKGFVRSVENDLRG---- 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE---TVGGHA 428
L GK V++GAGGA K +A +G + I NR ++A+ L + +VGG
Sbjct: 117 -------LKGKKAVLLGAGGASKGIAMALAQQGMNLHILNRNPEKAKTLVQIIHSVGG-- 167
Query: 429 LSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
A F P D + +L TTS+G+ + P + ALV D ++ P T
Sbjct: 168 --TATFGEFEPGDWLENLDLLVQTTSVGLNK--EPFPFSLEGIDKEALVVDIIFNPLETS 223
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LREA++ G +GLEM + Q +E + G ++A
Sbjct: 224 FLREAKKLGCRTQNGLEMLLYQGALAWEFWLGEQAPLDA 262
>gi|418284153|ref|ZP_12896885.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21202]
gi|365165017|gb|EHM56847.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21202]
Length = 268
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 142/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDQVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|261402316|ref|YP_003246540.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
gi|261369309|gb|ACX72058.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
Length = 283
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 154/275 (56%), Gaps = 25/275 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SPI++N AFK N V+V +L + + + S GF+
Sbjct: 6 TKVVGLIGHPVEHSFSPIMHNTAFKDKKLNYVYVAFDVLPEHLGDAIKGAKSLGIVGFNI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D AK IGAVN + + +GK GYNTD +GA A+E+ +
Sbjct: 66 TIPHKIEVMKYLDEIDKDAKLIGAVNTV--KIDNGKAIGYNTDGIGARRALEEEI----- 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----- 425
+ GK VV GAGGAG+A+A+ AK R++IANRT ++A+ LA+ +
Sbjct: 119 ------GEVKGKNIVVYGAGGAGRAVAFEL-AKNNRIIIANRTIEKAKNLAKEIAEKLNK 171
Query: 426 --GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPKI 482
G + +DL N + D I+ N T IGM P VD PI K L +V D VY P
Sbjct: 172 KFGEEVKFSDL-NVDLSDVDIVINATPIGMYPNVDVEPIVKADKLREDMVVMDLVYNPLE 230
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA+++ A ++GL M I Q ++ +TG+
Sbjct: 231 TVLLKEAKKANAKAINGLGMLIHQGAVAFKIWTGV 265
>gi|145577935|gb|ABP82686.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar vazensis]
Length = 238
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 142/249 (57%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A+ L V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V+ TP+ +L +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPYVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|254509711|ref|ZP_05121778.1| shikimate 5-dehydrogenase [Rhodobacteraceae bacterium KLH11]
gi|221533422|gb|EEE36410.1| shikimate 5-dehydrogenase [Rhodobacteraceae bacterium KLH11]
Length = 277
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 15/271 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HS+SP L+ KS +G +V + V D+ +T F G + T+PH
Sbjct: 10 GVIGHPIAHSRSPKLHGHWLKSYALDGHYVPMDVAPADLETVLRTLPKAGFVGANVTVPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEAA++ D+V A IGA N ++ + DG + NTD G ++ + DG N G
Sbjct: 70 KEAALRLADQVSDRASVIGAANTLMFHE-DGSILADNTDGYGFMANLRDGAP-DWNPQDG 127
Query: 375 VSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
+ VV GAGGA +A+ A+A +++ NRT RA L E G +
Sbjct: 128 PA--------VVFGAGGAARAVLQALAQAGVPEILLTNRTRARADHLKEEFGQRITVIDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N E ++ NTTS+GMQ + E +P L A+V D VY P T+LL++AEE+
Sbjct: 180 VQAGNVIEQAELVVNTTSLGMQGQ-PELRVPLDGLQPGAVVTDLVYAPLQTQLLKQAEEA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G T V GL M + QA +E + G+ +++A
Sbjct: 239 GCTTVDGLGMLLHQAVPGFECWFGVRPEVDA 269
>gi|237721322|ref|ZP_04551803.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_2_4]
gi|293369404|ref|ZP_06615989.1| putative shikimate 5-dehydrogenase [Bacteroides ovatus SD CMC 3f]
gi|299148550|ref|ZP_07041612.1| shikimate dehydrogenase [Bacteroides sp. 3_1_23]
gi|336414812|ref|ZP_08595156.1| hypothetical protein HMPREF1017_02264 [Bacteroides ovatus
3_8_47FAA]
gi|383114468|ref|ZP_09935231.1| shikimate 5-dehydrogenase [Bacteroides sp. D2]
gi|423288849|ref|ZP_17267700.1| shikimate 5-dehydrogenase [Bacteroides ovatus CL02T12C04]
gi|229449118|gb|EEO54909.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_2_4]
gi|292635571|gb|EFF54078.1| putative shikimate 5-dehydrogenase [Bacteroides ovatus SD CMC 3f]
gi|298513311|gb|EFI37198.1| shikimate dehydrogenase [Bacteroides sp. 3_1_23]
gi|313693826|gb|EFS30661.1| shikimate 5-dehydrogenase [Bacteroides sp. D2]
gi|335942182|gb|EGN04030.1| hypothetical protein HMPREF1017_02264 [Bacteroides ovatus
3_8_47FAA]
gi|392670047|gb|EIY63533.1| shikimate 5-dehydrogenase [Bacteroides ovatus CL02T12C04]
Length = 248
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQQKGKVKLVGYNSDIIGFTQSIQPLLQPHHQK 123
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 124 A------------LILGTGGASKAVYHGLKNLGIESIFVSRTHK------------ADDM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + I+ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTIIVNCTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|116873669|ref|YP_850450.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742547|emb|CAK21671.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 29/286 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T++ +IG P+ HSKSPI+YN +F+ G + ++ + V+ +A + +
Sbjct: 3 KRISGSTRLLSLIGTPIDHSKSPIMYNYSFEKAGLDYAYLAFDIPVNKVADAITAIKTFN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K +K D++ A+ IGAVN I+ +GKL G+ TD +G ++ + D
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVTNLRDS 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
S ++GK +IGAGGA A+ G + + I + Y++A++
Sbjct: 121 -----------SVDVSGKKMTIIGAGGAATAIQVQCALDGVKEIAIFNIQDDFYEKAKQT 169
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
++ H L+D + E IL N T +GM P +ETP+ +
Sbjct: 170 VASIKEEVPECSVHIYDLSDTKKLYAEIATSDILVNATLVGMHPHENETPVKDTTVFRKD 229
Query: 472 LVF-DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
L+ D +YTPK TRLL +AE +GA V GL M + Q E Y+ FTG
Sbjct: 230 LIVADIIYTPKKTRLLLDAEAAGAKTVGGLGMLLWQGAEAYKLFTG 275
>gi|262408542|ref|ZP_06085088.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_1_22]
gi|294646497|ref|ZP_06724134.1| putative shikimate 5-dehydrogenase [Bacteroides ovatus SD CC 2a]
gi|294807525|ref|ZP_06766322.1| putative shikimate 5-dehydrogenase [Bacteroides xylanisolvens SD CC
1b]
gi|345512371|ref|ZP_08791901.1| shikimate 5-dehydrogenase [Bacteroides sp. D1]
gi|423212266|ref|ZP_17198795.1| shikimate 5-dehydrogenase [Bacteroides xylanisolvens CL03T12C04]
gi|229444243|gb|EEO50034.1| shikimate 5-dehydrogenase [Bacteroides sp. D1]
gi|262353407|gb|EEZ02501.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_1_22]
gi|292638116|gb|EFF56497.1| putative shikimate 5-dehydrogenase [Bacteroides ovatus SD CC 2a]
gi|294445226|gb|EFG13896.1| putative shikimate 5-dehydrogenase [Bacteroides xylanisolvens SD CC
1b]
gi|392695154|gb|EIY88379.1| shikimate 5-dehydrogenase [Bacteroides xylanisolvens CL03T12C04]
Length = 248
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPSINNFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G + +RT+ A +
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESIFVSRTHK------------ADDM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTVIVNCTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|448310668|ref|ZP_21500466.1| shikimate 5-dehydrogenase [Natronolimnobius innermongolicus JCM
12255]
gi|445607408|gb|ELY61289.1| shikimate 5-dehydrogenase [Natronolimnobius innermongolicus JCM
12255]
Length = 269
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 149/278 (53%), Gaps = 27/278 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
VFG+IG PVGHS SP ++ A+ ++ + +V D I ++ G + T
Sbjct: 2 DVFGLIGNPVGHSLSPPMHEAAYDALEMDARYVTFEPDPDAIEDAIDGAAALGVTGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A++C E D +A IGAVN I + G+NTD GA+ ++ D
Sbjct: 62 IPFKQDALECV-EADPLASRIGAVNTIDFTGE--RPTGHNTDAGGALRSLRDH------- 111
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
A+ G+ VV+GAGGAG+A+A+G A V IANRT A ELA+ V GH
Sbjct: 112 ----DVAVDGERAVVVGAGGAGRAIAFGLADADATVEIANRTESTAHELADDVPGATGHG 167
Query: 429 L---SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L +LADL D IL N TS+GM DETP+P AL V DAVY+P TRL
Sbjct: 168 LESGTLADLL----ADADILVNATSVGMD-DGDETPVPAAALHGELAVLDAVYSPLETRL 222
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LREA ++GAT + G M + Q E +E +TG ++A
Sbjct: 223 LREAADAGATTIDGAWMLLYQGVEAFEHWTGRDAPVDA 260
>gi|443309942|ref|ZP_21039617.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
gi|442779995|gb|ELR90213.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
Length = 291
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 26/283 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SPI++N A +G + V++ L V D++ +++ D GF+
Sbjct: 9 TKLLGVIGHPVEHSLSPIMHNAAIAHLGLDYVYLPLPVHPDNLQAAISGFAAIDLVGFNI 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A E+ AK+IGA+N + R S G NTD G I+ ++
Sbjct: 69 TIPHKQAITPLITEISATAKAIGAINT-VWRTSSSIWAGTNTDVEGFITPLQT------- 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL 429
+ + K +V+G GGA +A+ G G + + R + E + G AL
Sbjct: 121 ----YAQNWSEKTALVLGNGGAARAVVAGCAQLGFKETYVVGRNPTKLAEFIASWGNSAL 176
Query: 430 -------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
S L P+ +I+ NTT IGM P V E+P+ +G A+ +D +YT
Sbjct: 177 ATQLLVRSWDKLPLLIPQAKVII-NTTPIGMYPNVRESPLSDEEMGLLAADAIAYDLIYT 235
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
P T+ L++A+ GAT + GLEM + Q + + P ++
Sbjct: 236 PSPTKFLQQAQAKGATAIDGLEMLVQQGAAALKIWLQQPAPID 278
>gi|390596086|gb|EIN05489.1| Pentafunctional AroM protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1627
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 234/521 (44%), Gaps = 75/521 (14%)
Query: 49 GADLVEIRLDGLKN----------FNP-----RENIKTLIKESPVPTLFTYRPIWEGGQY 93
G D VE+R+D L+ + P + + L + + +P +FT R +GG +
Sbjct: 1109 GVDAVELRVDLLRRPQDIGSAQPGYIPPVAYVADQLAALRRATSLPVVFTVRTASQGGAF 1168
Query: 94 DGD-ENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK--CKVIVSSHNY--QY 148
D E E ++ LA+ L A+Y+DVE+ + D IR K ++I S H++
Sbjct: 1169 PDDAEKEAFELADLALRLAAEYVDVEISWS---EDRIRDLATRKGHSQIIASWHDFSGNM 1225
Query: 149 TPSVEDLSNLVARIQASGADIVKFATTALDITD-------VARVFQITVHSQVPIIGLVM 201
T S D R A G DIVK A + D VAR + PII L M
Sbjct: 1226 TWSAVDTLRKHDRAHALG-DIVKLVGFAETLEDNFALHDFVAR--RSAAPGAKPIIALNM 1282
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
G G +SR+L GG+ +F + + ++ +APGQ T + + P + F +
Sbjct: 1283 GTEGQMSRVL----GGWSSFSPVTHALLPSRAAPGQLTFAQVQTALHLLGQLP-ARRFYL 1337
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKE 316
+G P+ HS SP+L+N F +G + L D + + DF G S TIP K
Sbjct: 1338 LGNPIAHSPSPVLHNTGFAVLGLPHRYALLQTATVDEEEVRAAMRAADFGGASVTIPFKR 1397
Query: 317 AAVKCCDEVDTVAKSIGAVNCIIRR-QSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSG 373
+ DE+ AK+IGAVN ++ R + DG LFG NTD++G I +R RL
Sbjct: 1398 DIMAELDELSEHAKAIGAVNTVVARARPDGTRYLFGDNTDWLG----IRACVRARL---A 1450
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELA----------E 422
G + AG +VIGAGG +A Y + G + V + NRT RA +A E
Sbjct: 1451 GAAVPEAG---LVIGAGGTARAAIYALRGLGVKTVYVYNRTRARAEAVARGFEFAGTEAE 1507
Query: 423 TVGGHALSLADLENFNPED--GMILANTTSIGMQPKVDE-TPIPKHALGHYALVFDAVYT 479
T G L P G + A+ T++ + E P +V + Y
Sbjct: 1508 TEIGVVDVLGRWSAAAPGVVVGTVPASATTLDPAARDAEFLPSAIFEREEGGVVIEMAYR 1567
Query: 480 PKITRLL----REAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T LL R+ E T V G+++ + Q YEQ+E +TG
Sbjct: 1568 PAETPLLALARRQGGERWKTAV-GVDVLLEQGYEQFEMWTG 1607
>gi|418313246|ref|ZP_12924740.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21334]
gi|365236517|gb|EHM77406.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21334]
Length = 268
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 142/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELEGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE ++ D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIQYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|435850486|ref|YP_007312072.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
gi|433661116|gb|AGB48542.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
Length = 273
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 20/269 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+F + G P+ HS SP+++N AFK+ G + + V + + + + F G + T
Sbjct: 3 KIFAVFGDPIEHSLSPVMHNAAFKAKGMDCTYHAFRVSREKLKDAIKGAHAMGFGGLNLT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+P KE A+K E D +A +GAVN + + DG + GYNTD +GA A+ V
Sbjct: 63 VPLKEEALKIV-EPDLLAAVMGAVNTVDLK--DG-IRGYNTDGIGAERAL---------V 109
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHALS 430
GV + G +++GAGGA + +++ + GA V IANRT +RA LAE V +
Sbjct: 110 DAGVK--IEGAKVLIVGAGGAARGISFQLASDGADVTIANRTPERAMRLAEDVAVAGNVK 167
Query: 431 LADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LE + +L N T++GM P+V+ T + +VFD VY P T+LL E
Sbjct: 168 GCGLEQLDDLIASADVLINCTTLGMHPQVETTIATAEQMHAGLVVFDIVYNPLKTKLLME 227
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
AE++G+ VSG+ M + Q E + +TG+
Sbjct: 228 AEKAGSKTVSGVMMLVYQGAEAFRIWTGV 256
>gi|291571861|dbj|BAI94133.1| shikimate 5-dehydrogenase [Arthrospira platensis NIES-39]
Length = 285
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 138/278 (49%), Gaps = 24/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI+G PV HS SPI++N A +G + V+V V D +A ++ + + GF+
Sbjct: 6 TKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQGFNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + D V +A ++GAVN + SD G NTD G ++ ++ LN
Sbjct: 66 TIPHKQAIIPLLDNVSKLATAVGAVNTV--WYSDKGWSGTNTDVAGFLAPLK-----ALN 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +A+ G G A + I R + E ++ L
Sbjct: 119 CPN-----WHEKIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQSWLNSPL 173
Query: 430 SLA----DLENFNP--EDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP 480
+ + + NP + +L NTT +GM P +D +P+ L A+ +D +YTP
Sbjct: 174 PIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAYDLIYTP 233
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
+ TR L+ A+ GA + GLEM I Q E + P
Sbjct: 234 RPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQP 271
>gi|418321231|ref|ZP_12932577.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
VCU006]
gi|418875535|ref|ZP_13429791.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC93]
gi|365225463|gb|EHM66706.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
VCU006]
gi|377769607|gb|EHT93375.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC93]
Length = 268
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLADTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIISYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T MN+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADMNS 256
>gi|304392715|ref|ZP_07374655.1| shikimate 5-dehydrogenase [Ahrensia sp. R2A130]
gi|303295345|gb|EFL89705.1| shikimate 5-dehydrogenase [Ahrensia sp. R2A130]
Length = 278
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+TK +IG P+ HS+SP+++ + G ++ V +++ FF + +F G +
Sbjct: 3 ETKRAFVIGHPISHSRSPLVHGMWLQHHALEGTYIAHDVSPENLLAFFNRIRAGEFVGGN 62
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKE A++ DEVD A+ +GA+N + +L G NTD G ++ ++D R
Sbjct: 63 ITLPHKETALELVDEVDDTARRLGAINTVWMEGD--RLLGTNTDGEGFLANLDD----RH 116
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA 428
+ AG L V+GAGGA +A+ G +G RV +ANRT R +AE GG
Sbjct: 117 PGWDAPARLRAGAL--VLGAGGASRAIVMGLADRGFQRVTVANRTVARGEAIAEEFGGPC 174
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+++ E D ++ NTTS+GM + PI LV DAVYTP +T LL
Sbjct: 175 DTISIDEASKGGDYGLIVNTTSLGM--GGEGMPIDPALFPRSTLVTDAVYTPLMTPLLLA 232
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A+ +G V GL M + QA +ER+ G+
Sbjct: 233 AKAAGQPTVDGLGMLLYQAVPGFERWFGI 261
>gi|262051254|ref|ZP_06023478.1| shikimate dehydrogenease [Staphylococcus aureus 930918-3]
gi|259160891|gb|EEW45911.1| shikimate dehydrogenease [Staphylococcus aureus 930918-3]
Length = 268
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELEGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAEN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|217967442|ref|YP_002352948.1| shikimate 5-dehydrogenase [Dictyoglomus turgidum DSM 6724]
gi|226729103|sp|B8E257.1|AROE_DICTD RecName: Full=Shikimate dehydrogenase
gi|217336541|gb|ACK42334.1| shikimate 5-dehydrogenase [Dictyoglomus turgidum DSM 6724]
Length = 275
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 32/282 (11%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSND 304
+ P TK++G+IG P+GHS S ++N AF+++ + +++++ ++ +FF
Sbjct: 2 ISPSTKLYGLIGYPLGHSISFYIHNAAFRALSIDALYLNIPIE--PEFFSKAILGIKYLP 59
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + TIPHKE+ ++ DE+ ++ +GAVN + R K G NTD+ G + +ED
Sbjct: 60 IYGLNVTIPHKESIIEFLDEISEISNILGAVNTVYRENHKWK--GDNTDFGGFLKTLED- 116
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAET 423
LN+S S +++GAGGA +A+ Y G + V + NRTY+RA ++A
Sbjct: 117 ----LNLSSDFSC-------LILGAGGAARAVIYAVLEYGFKEVYLTNRTYERAEKIAVE 165
Query: 424 VGGH------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
V + + D E + + +IL NTTSIG+ K ETP V+D +
Sbjct: 166 VKKNKNFEIKVIPWEDREKIS--EKVILINTTSIGLDGK--ETPW-NGDFKKLVFVYDII 220
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
Y PK T LL+ A+E+ +GL+M I QA +E++ G G
Sbjct: 221 YNPKETPLLKLAKENNVPYKNGLDMLIYQACLSWEKWFGFVG 262
>gi|254466135|ref|ZP_05079546.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206687043|gb|EDZ47525.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 277
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 141/266 (53%), Gaps = 19/266 (7%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G+IG PV HSKSP L+ K+ G +V + V+ D+A+ + F G + TIPH
Sbjct: 10 GVIGCPVSHSKSPQLHGHWLKTHRIAGHYVPMHVEPADLAEAIRAMPKMGFVGANVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA + D+V AK IGA N +I R+ DG + NTD G ++ + G SG
Sbjct: 70 KEAVMGIADKVTDRAKLIGAANTLIFRE-DGTILADNTDGYGFVTNLHQGAPDWDPQSGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD 433
VV+GAGGA +A+ G ++++NRT +RA +L + G +
Sbjct: 129 A---------VVLGAGGACRAVVASLIEAGVPEILLSNRTRERAEQLQKDFGNRIRVVEW 179
Query: 434 LENFNP-EDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L+ N E+G ++ NTTS+GM +P++ +P L A+V D +Y P T LL AE
Sbjct: 180 LQAGNAIEEGRLIVNTTSLGMVGKPRLR---VPLDGLRSDAVVTDLIYAPLKTGLLETAE 236
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTG 516
E+G T+V GL M + QA +ER+ G
Sbjct: 237 EAGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|417890247|ref|ZP_12534326.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21200]
gi|341855940|gb|EGS96784.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21200]
Length = 268
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINTGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|126738509|ref|ZP_01754214.1| shikimate 5-dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126720308|gb|EBA17014.1| shikimate 5-dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 277
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 139/264 (52%), Gaps = 15/264 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG PV HSKSP L ++G G +V H+ +D+ +T F G + TIPH
Sbjct: 10 GVIGCPVAHSKSPQLQTHWLTTLGIAGHYVPMHVEAEDLETVIRTLPKAGFVGANVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA ++ D++ AK +GA N +I R DG + NTD G I+ + +G N + G
Sbjct: 70 KEAVMEIADKITDRAKLMGAANTLIFR-PDGSIMADNTDGYGFITNLH---QGAPNWNPG 125
Query: 375 VSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
A V+GAGGA +A +A +A +++ NRT +RA +L + G +
Sbjct: 126 SGPA------AVLGAGGACRAVIASLLEAGIPEIMLTNRTQERAEKLRKEFGKKIKVVEW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
L N ED ++ NTTS+GM+ K +P L +V D +YTP T L++ AEE
Sbjct: 180 LHAGNIIEDAKLVVNTTSLGMEGK-PRLRVPLDGLAPDKVVTDLIYTPLKTHLIKTAEEV 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G T+V GL M + QA +ER+ G
Sbjct: 239 GCTVVDGLGMLLHQAVPGFERWFG 262
>gi|327507667|sp|C0S433.1|ARO1_PARBP RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225681904|gb|EEH20188.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb03]
Length = 1603
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 237/512 (46%), Gaps = 56/512 (10%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L VP +FT R +GG++ D
Sbjct: 1083 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQGGRFPDDAY 1142
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+EL ++ ++ K K+I S H+ + S + S
Sbjct: 1143 DAALQLYRLAIRMGSEFVDLELSFPKQLLRTVTEMK-GFSKIIASHHDPEGLLSWANGSW 1201
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VP+I + MG +G +SRIL
Sbjct: 1202 IQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMGYKGQLSRIL- 1260
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ MG K F +IGKPV S+SP
Sbjct: 1261 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLMGEIKAKKFAVIGKPVSSSRSPA 1315
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
++N FK +G + + D++ + S DF G S TIP K + DE+ A+
Sbjct: 1316 MHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLLDEIAPEAE 1375
Query: 331 SIGAVNCIIR-------RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
IGAVN I+ + +L G NTD+ G + + D G + + +S+ AG
Sbjct: 1376 MIGAVNTIVSVPAAPGDKFQSSRLIGRNTDWQGMVRCLSDA--GAYSAATPTTSS-AG-- 1430
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD----LENF 437
++IG GG +A + + + + I R+ ++ +A + + + + D LE+
Sbjct: 1431 -LIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNIRIVDDVKALESL 1489
Query: 438 N-------PEDGMILANTTSI-----GMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
P D I + + + K + K + ++ + Y P +T L
Sbjct: 1490 PMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRILLEMAYKPSVTSL 1549
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++ A ++G T++ GLE+ + Q Q E +T +
Sbjct: 1550 MKLASDAGWTVLPGLEVLVAQGVYQSEYWTDI 1581
>gi|159906101|ref|YP_001549763.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
gi|238687001|sp|A9AB08.1|AROE_METM6 RecName: Full=Shikimate dehydrogenase
gi|159887594|gb|ABX02531.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
Length = 279
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 33/277 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SPI++N A K +G N ++ V +++ + AGF+
Sbjct: 6 TKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIAGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D AKSIGAVN + + +GK GYNTD +G A+E+
Sbjct: 66 TIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEEK------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--- 427
S L K ++IG+GGA +A+++ AK + I NR ++A+ L+E +
Sbjct: 118 -----SGILINKNILIIGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEELSTKLKK 171
Query: 428 -------ALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYT 479
AL++ D++NF+ I+ NTT +GM P D P IP + + A+V D +Y
Sbjct: 172 ENSIKYGALNI-DIKNFD-----IIINTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIYN 225
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P L+EA + G ++GL M + Q ++ +TG
Sbjct: 226 PLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTG 262
>gi|428308139|ref|YP_007144964.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
gi|428249674|gb|AFZ15454.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 27/279 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG P+ HS SP+++N A +G + V++ + +D+ +++ D GFS
Sbjct: 8 TKLLGVIGSPIEHSLSPVMHNAAITHLGLDYVYLPFPIKPEDLEIAIAGFAAIDLVGFSV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA+++GAVN + R + G NTD G I+ + D R N
Sbjct: 68 TIPHKQAIMPLLSEISPVAQAVGAVNTVWRNHNGWS--GTNTDVEGFIAPLRDHNR---N 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
V+ V++G GGA +A+ G G ++V + R D+ + ++ L
Sbjct: 123 WQESVA--------VILGNGGASRAVVAGCAQLGFSKVQVVGRNQDKLNQFLDSFTNSPL 174
Query: 430 SL-------ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+ +L N + + L NTT IGM P V+++P+ + A+ +D +YT
Sbjct: 175 DVNLSVHQWEELPNLISQANL-LVNTTPIGMHPHVNDSPVDAELMAKLPTDAIAYDIIYT 233
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
PK T+ L+ A+ GA + GLEM I Q + + P
Sbjct: 234 PKPTQFLKAAQNFGAITIDGLEMLIYQGAAALKIWLNQP 272
>gi|289192372|ref|YP_003458313.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus sp.
FS406-22]
gi|288938822|gb|ADC69577.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus sp.
FS406-22]
Length = 220
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 132/228 (57%), Gaps = 12/228 (5%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ +SV+K + + AD+VE R+D LK + E+IK K P + T
Sbjct: 1 MICLPVVEDSVEK-AIKTAEKYLEIADIVEFRIDMLKEVS-EEDIKKFAK---YPCIITV 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIV 141
RP WEGG + G+ ER+++++ A+E A Y+D+EL+ E N I R + K K+I+
Sbjct: 56 RPDWEGGYWKGNNEERLNLIKKAIEYNAKYVDIELR--EEKNKEIVKFRDEIGSKTKIII 113
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H+++ TPS E L ++V + + G DI KFAT A DV + ++ IIG+ M
Sbjct: 114 SYHDFEKTPSKEKLVDVVEKALSIG-DIAKFATMANSKEDVLNILEVINKYPGKIIGIGM 172
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
GE+G ++RIL FG LTF + + G SAPGQ + L +++ ++
Sbjct: 173 GEKGKLTRILGVYFGSILTFASYK-GKSSAPGQVDVDTLKEIWKLMKL 219
>gi|425770111|gb|EKV08585.1| Pentafunctional AROM polypeptide [Penicillium digitatum Pd1]
gi|425771658|gb|EKV10095.1| Pentafunctional AROM polypeptide [Penicillium digitatum PHI26]
Length = 1586
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 231/515 (44%), Gaps = 68/515 (13%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L++ E + L + + +P +FT R +GG++ D +
Sbjct: 1075 GSDAVELRVDLLRDPTVDGDIPSVDYVNEQLSILRRSTTLPLIFTIRTKSQGGRFPDDAH 1134
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK---CKVIVSSHNYQYTPSVED 154
+ + + RLA G +++D+E+ F D++ E ++I S H+ T S +
Sbjct: 1135 DAAIQLYRLAFRSGCEFVDLEIA----FPDAMLRAVTEMKGYSRIIASHHDPMGTLSWAN 1190
Query: 155 LSNLVARIQA-SGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISR 209
+S + + +A D++K A LD + R F+ VP+I + MG+ G +SR
Sbjct: 1191 VSWMQSYNRALEYGDVIKLVGVANSLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQLSR 1250
Query: 210 ILCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSK 267
IL GF+T + + +APGQ + ++ MG K F + G PV S+
Sbjct: 1251 IL----NGFMTPVSHPSLPFKAAPGQLSAAEIR--RGLSLMGEIKAKKFAVFGSPVSGSR 1304
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N F +G + L +I ++DF G S TIP K + DEV
Sbjct: 1305 SPALHNTLFGKMGLPHEYSRLETTNIEDVKDFIRASDFGGASVTIPLKLDIMPLLDEVAQ 1364
Query: 328 VAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
A+ IGAVN I+ + K L GYNTD+ G + + + GV + +
Sbjct: 1365 EAEIIGAVNTIVPVPNGDKPPRLIGYNTDWQGMVRCMRN---------AGVYGSTGNESA 1415
Query: 385 VVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VVIG GG +A + G + + + R+ + ++ T + ++ ++N D +
Sbjct: 1416 VVIGGGGTARAAIFALHDMGFSPIYVVGRSASKLEDMVSTFPIN-YNIRVVDNRAQLDTV 1474
Query: 444 ILANTTSIGMQPKVDETPIPKHALGH---------------------YALVFDAVYTPKI 482
+I +D P+ + L H + ++ + Y P +
Sbjct: 1475 PQVAIGTIPADRSID--PVMRETLCHMFERAQEIDGTLIGKSSDASKHRVLLEMAYKPTV 1532
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T L++ A ++G T + GLE+ +GQ Q+ +TG+
Sbjct: 1533 TALMQLASDAGWTTIPGLEVLVGQGVYQFVHWTGI 1567
>gi|347549627|ref|YP_004855955.1| putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982698|emb|CBW86717.1| Putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 289
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 139/280 (49%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + + G +
Sbjct: 9 TRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAITAMKTFNLRGSNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 69 TMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
GV +AGK +IGAGGA A+ + GA+ + I + Y +A++ ++
Sbjct: 121 ---GVD--IAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDNFYQKAKQTVTSIKK 175
Query: 427 -------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
H L D E E IL N T +GM P +ETP+ + L+ D
Sbjct: 176 EVPDCIVHIYDLNDTEKLYAEIATSDILVNATLVGMHPYENETPVKDATIFSKDLIVADV 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY PK T+L+ +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 VYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|428768969|ref|YP_007160759.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683248|gb|AFZ52715.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
Length = 287
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 26/285 (9%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDF 305
Q+ TK+ GIIG P+ HS SP+ N A S+ + ++V V+ ++ + F T+ +
Sbjct: 2 QITGKTKLLGIIGNPIEHSMSPVFQNSAIASLNLDYIYVPFAVEKENLQELFNTFKAVKI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GF+ TIPHKE + D + AK IGAVN + +++ + G NTD G IS ++
Sbjct: 62 RGFNVTIPHKENVLPFLDYITETAKIIGAVNTVWLTENN-QWHGTNTDIDGFISPLKSLD 120
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETV 424
+ N++ +V+G GGA +A+ G G R + I R D+ ++ +
Sbjct: 121 KNWANITP-----------LVLGNGGASRAVIVGCSELGCREIKIVGRNLDKLKQFKASF 169
Query: 425 GGHAL-------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVF 474
L + +L + P +I+ NTT +GM P + ++P+ + A+ +
Sbjct: 170 ANTTLKAEISIYTWDELTDLIPHSQLIV-NTTPMGMYPHISQSPLTSSQAQLICEDAIAY 228
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
D +Y P+ T L++AE+ GA I+ G EM + Q +E +T P
Sbjct: 229 DLIYNPRPTLFLQQAEKQGAKIIDGSEMLVQQGAVAFEIWTHHPA 273
>gi|445059505|ref|YP_007384909.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
gi|443425562|gb|AGC90465.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
Length = 269
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 24/267 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N+ F+S+ + V++ +++ + GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPLMHNKNFESLDLKFTYEAVNVPIENFKHIREIIEEKHLDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE+D + S+GAVN ++ R DGK GYNTD +G ++ ++
Sbjct: 63 HKERIIPYLDEIDAQSSSVGAVNTVLIR--DGKWIGYNTDGIGYVTGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V + L +++GAGGA K +A K ++ +ANRT R V +L A
Sbjct: 111 -VYNDLENAYILILGAGGASKGIANELIKFVNTKLTVANRTMKRFETWDLEVNQISLEQA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D PI L LV D VY P T +L AE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMDDNQD-IPIDLKYLNPETLVSDIVYIPYKTPILIAAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
G I +GL+MF+ Q E ++ +TGL
Sbjct: 224 NKGNPIYNGLDMFVYQGAESFKIWTGL 250
>gi|156034494|ref|XP_001585666.1| hypothetical protein SS1G_13550 [Sclerotinia sclerotiorum 1980]
gi|327507671|sp|A7F7H0.1|ARO1_SCLS1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|154698953|gb|EDN98691.1| hypothetical protein SS1G_13550 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1576
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 227/511 (44%), Gaps = 63/511 (12%)
Query: 47 ASGADLVEIRLDGLKNFNPRE----------NIKTLIKESPVPTLFTYRPIWEGGQY-DG 95
A G+D VE+R+D L++ + I L +P +FT R + +GG++ D
Sbjct: 1072 AVGSDAVEVRVDLLEDPSSTNGIPGTDFLSVQIAHLRSVVHLPVIFTVRTVSQGGRFPDA 1131
Query: 96 DENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
E + + +LA+++G +YID+E+ E + K ++I S H+ Q T S ++
Sbjct: 1132 AHEEALKLYKLAVKMGIEYIDLEIAFPDELLQEVTEAK-GFSRIIASHHDPQGTLSWKNG 1190
Query: 156 SNLVARIQA-SGADIVKFATTALDITD---VARVFQITVHS--QVPIIGLVMGERGLISR 209
+A DI+K +A I D +A+ F+ T+ + P+I + MG G +SR
Sbjct: 1191 GWFQHYNRALQYGDIIKLVGSAKSIEDNFALAK-FKKTMAAAHDTPLIAINMGVTGKLSR 1249
Query: 210 ILCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSK 267
+L GF+T + + +APGQ + ++ L ++ P K F + G P+ S+
Sbjct: 1250 VL----NGFMTPVSHPSLPFKAAPGQLSAAEIRSTLSTLGEIEP--KSFYLFGTPISQSR 1303
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N FK G + L D +A + DF G S TIP K + D V
Sbjct: 1304 SPALHNTLFKQTGLPHRYSRLETDRVADVQDVIRAPDFGGASVTIPLKLDIIPLLDSVTD 1363
Query: 328 VAKSIGAVNCIIRRQSD-GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
K IGAVN II + +L G NTD++G ++ ++ S S + +V
Sbjct: 1364 AVKVIGAVNTIIPTPDNPPRLVGENTDWLGMTHSL-------MSASHTPSPVDSPSPALV 1416
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRAREL-------------------AETVGG 426
IGAGG +A Y + G + + + RT + L E
Sbjct: 1417 IGAGGTARAAIYALHSLGHSPIYMVARTPSKLDTLINSFPSSFNIIPLPSTTSATELTTP 1476
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A++++ + P + + + K DE G + + Y P T L+
Sbjct: 1477 PAVAISTIPADRPIESNMRETLAVLLRHEKKDE--------GKQRTLLEMAYKPSQTPLM 1528
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
R AE++G + GLE+ Q + Q++++T +
Sbjct: 1529 RMAEDAGWVAIPGLEVLSAQGWYQFQKWTSI 1559
>gi|95928775|ref|ZP_01311521.1| shikimate 5-dehydrogenase [Desulfuromonas acetoxidans DSM 684]
gi|95135120|gb|EAT16773.1| shikimate 5-dehydrogenase [Desulfuromonas acetoxidans DSM 684]
Length = 280
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 27/288 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFS 309
+TK++GI+G PV HS SP++ N AF ++G + V+V H++ +D+ + G +
Sbjct: 6 ETKIYGILGDPVQHSLSPVMQNAAFTALGLDAVYVPFHVVPNDLEDAVAGLKALQVQGVN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKE D +D A IGAVN ++R S+ GYNTD +G + D L+ L
Sbjct: 66 VTVPHKEMVCAFMDRLDDEAALIGAVNTVVREGSE--FVGYNTDGLGLV----DSLKADL 119
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG-- 426
N+ + K +V+GAGGA ++ +G R + IANRT DRA++L E
Sbjct: 120 NID------VCQKNVMVLGAGGAARSAIVALARQGVRKLTIANRTVDRAQQLVERYQPSF 173
Query: 427 -------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
+L+ L + E +I+ N+TS+G+ + +P H +G ++D +Y+
Sbjct: 174 PDVDFLVSSLTCEALTSVVSETDLIV-NSTSLGLSGESFNV-LPWHVVGRPCYIYDMIYS 231
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL-PGKMNAPHL 526
+ T L+ A E G GL M I Q + +TG PG+ A L
Sbjct: 232 AQGTPLVLAARERGYRCCDGLGMLIAQGEAAFRLWTGKDPGRAMAQAL 279
>gi|56421059|ref|YP_148377.1| shikimate 5-dehydrogenase [Geobacillus kaustophilus HTA426]
gi|375009614|ref|YP_004983247.1| shikimate dehydrogenase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448238802|ref|YP_007402860.1| shikimate 5-dehydrogenase [Geobacillus sp. GHH01]
gi|56380901|dbj|BAD76809.1| shikimate 5-dehydrogenase [Geobacillus kaustophilus HTA426]
gi|359288463|gb|AEV20147.1| Shikimate dehydrogenase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445207644|gb|AGE23109.1| shikimate 5-dehydrogenase [Geobacillus sp. GHH01]
Length = 276
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 151/270 (55%), Gaps = 21/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
KV+G+IG PV HS SP+++N+AF +G + V+ + + AG + T
Sbjct: 3 KVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN II +DG+L GYNTD +G + A+E+ +N+
Sbjct: 63 IPHKLAVIPFLDEVDEHARRIGAVNTII--NNDGRLVGYNTDGLGYVQALEE----EMNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRA----RELAETVGG 426
+ L GK +VIGAGG + + + + A R+ +ANRT ++A RE E
Sbjct: 117 T------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ SLA+ E E +I+ NTTS+GM P+V+ P+ L +V D +Y P T+ L
Sbjct: 171 Y-FSLAEAETRLAEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETKWL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA+ GA + +G+ M + Q +E++TG
Sbjct: 229 KEAKARGARVQNGVGMLVYQGALAFEKWTG 258
>gi|170292125|pdb|2EGG|A Chain A, Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From
Geobacillus Kaustophilus
gi|170292126|pdb|2EGG|B Chain B, Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From
Geobacillus Kaustophilus
Length = 297
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 151/278 (54%), Gaps = 19/278 (6%)
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSS 302
N G KV+G+IG PV HS SP+++N+AF +G + V+ + +
Sbjct: 15 NLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRA 74
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
AG + TIPHK A + DEVD A+ IGAVN II +DG+L GYNTD +G + A+E
Sbjct: 75 LGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTII--NNDGRLVGYNTDGLGYVQALE 132
Query: 363 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAREL- 420
+ +N++ L GK +VIGAGG + + + + A R+ +ANRT ++A L
Sbjct: 133 E----EMNIT------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182
Query: 421 --AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ SLA+ E E +I+ NTTS+GM P+V+ P+ L +V D +Y
Sbjct: 183 REGDERRSAYFSLAEAETRLAEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T+ L+EA+ GA + +G+ M + Q +E++TG
Sbjct: 242 NPLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTG 279
>gi|15669272|ref|NP_248077.1| shikimate 5-dehydrogenase [Methanocaldococcus jannaschii DSM 2661]
gi|2492956|sp|Q58484.1|AROE_METJA RecName: Full=Shikimate dehydrogenase
gi|1591730|gb|AAB99086.1| shikimate 5-dehydrogenase (aroE) [Methanocaldococcus jannaschii DSM
2661]
Length = 282
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 143/276 (51%), Gaps = 27/276 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SPI++N AFK G N V+V +L +++ + GF+
Sbjct: 6 TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A+ IGAVN I + DGK GYNTD +GA A+E+ + GR+
Sbjct: 66 TIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI-GRVK 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----- 425
+VI G AK ++IANRT ++A LA+ +
Sbjct: 123 DKN-----------IVIYGAGGAARAVAFELAKDNNIIIANRTVEKAEALAKEIAEKLNK 171
Query: 426 --GHALSLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 481
G + + L+ DG+ I+ N T IGM P +D PI K L +V D +Y P
Sbjct: 172 KFGEEVKFSGLD--VDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPL 229
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA++ A ++GL M I Q ++ +TG+
Sbjct: 230 ETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGV 265
>gi|418308946|ref|ZP_12920527.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21194]
gi|365236095|gb|EHM76997.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21194]
Length = 268
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEDLNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|289435577|ref|YP_003465449.1| shikimate 5-dehydrogenase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171821|emb|CBH28367.1| shikimate 5-dehydrogenase, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 289
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 139/280 (49%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + + G +
Sbjct: 9 TRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNLRGSNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 69 TMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
GV+ +AGK +IGAGGA A+ + GA+ + I + Y +A++ ++
Sbjct: 121 ---GVT--VAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQTVASIKQ 175
Query: 427 HA-------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
L D E E IL N T +GM P ETP+ + H L+ D
Sbjct: 176 EVPNCIVRIYDLNDTEKLYAEIATSNILVNATLVGMHPYESETPVKDATVFHKDLIVADV 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY PK T+L+ +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 VYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|49483843|ref|YP_041067.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425720|ref|ZP_05602144.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428381|ref|ZP_05604779.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431018|ref|ZP_05607398.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433706|ref|ZP_05610064.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus E1410]
gi|257436620|ref|ZP_05612664.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
M876]
gi|258424023|ref|ZP_05686905.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9635]
gi|282904177|ref|ZP_06312065.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus C160]
gi|282906004|ref|ZP_06313859.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908915|ref|ZP_06316733.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911233|ref|ZP_06319035.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914402|ref|ZP_06322188.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus M899]
gi|282916866|ref|ZP_06324624.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
D139]
gi|282919371|ref|ZP_06327106.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
C427]
gi|282924696|ref|ZP_06332364.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
C101]
gi|283770671|ref|ZP_06343563.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus H19]
gi|283958359|ref|ZP_06375810.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503476|ref|ZP_06667323.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510493|ref|ZP_06669199.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
M809]
gi|293531033|ref|ZP_06671715.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus M1015]
gi|295428173|ref|ZP_06820805.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590861|ref|ZP_06949499.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
gi|384867431|ref|YP_005747627.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus TCH60]
gi|415682398|ref|ZP_11447714.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
CGS00]
gi|417887866|ref|ZP_12531985.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21195]
gi|418558996|ref|ZP_13123543.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21252]
gi|418564956|ref|ZP_13129377.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21264]
gi|418582522|ref|ZP_13146600.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597133|ref|ZP_13160666.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21342]
gi|418600986|ref|ZP_13164434.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21345]
gi|418889411|ref|ZP_13443544.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418892325|ref|ZP_13446438.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418901100|ref|ZP_13455156.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909447|ref|ZP_13463443.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG149]
gi|418917493|ref|ZP_13471452.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418923277|ref|ZP_13477193.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982601|ref|ZP_13530309.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986267|ref|ZP_13533952.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1500]
gi|56748590|sp|Q6GGA5.1|AROE_STAAR RecName: Full=Shikimate dehydrogenase
gi|49241972|emb|CAG40667.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271414|gb|EEV03560.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275222|gb|EEV06709.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278448|gb|EEV09084.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281799|gb|EEV11936.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus E1410]
gi|257283971|gb|EEV14094.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
M876]
gi|257845644|gb|EEV69676.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9635]
gi|282313531|gb|EFB43926.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
C101]
gi|282317181|gb|EFB47555.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
C427]
gi|282319353|gb|EFB49705.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
D139]
gi|282321583|gb|EFB51908.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus M899]
gi|282324928|gb|EFB55238.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327179|gb|EFB57474.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331296|gb|EFB60810.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595795|gb|EFC00759.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus C160]
gi|283460818|gb|EFC07908.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus H19]
gi|283790508|gb|EFC29325.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920301|gb|EFD97367.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus M1015]
gi|291095142|gb|EFE25407.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466857|gb|EFF09377.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
M809]
gi|295128531|gb|EFG58165.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575747|gb|EFH94463.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
gi|312437936|gb|ADQ77007.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus TCH60]
gi|315195498|gb|EFU25885.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
CGS00]
gi|341856895|gb|EGS97722.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21195]
gi|371976093|gb|EHO93385.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21264]
gi|371976346|gb|EHO93636.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21252]
gi|374395369|gb|EHQ66636.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21342]
gi|374400233|gb|EHQ71352.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21345]
gi|377702497|gb|EHT26819.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704311|gb|EHT28621.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704882|gb|EHT29191.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710932|gb|EHT35170.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377730619|gb|EHT54686.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735236|gb|EHT59272.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377750667|gb|EHT74605.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377752094|gb|EHT76018.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG149]
gi|377752919|gb|EHT76837.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 268
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|153807536|ref|ZP_01960204.1| hypothetical protein BACCAC_01816 [Bacteroides caccae ATCC 43185]
gi|423216996|ref|ZP_17203492.1| shikimate 5-dehydrogenase [Bacteroides caccae CL03T12C61]
gi|149129898|gb|EDM21110.1| putative shikimate dehydrogenase [Bacteroides caccae ATCC 43185]
gi|392629526|gb|EIY23533.1| shikimate 5-dehydrogenase [Bacteroides caccae CL03T12C61]
Length = 248
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G N +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSEGINAEYVNFEIPQINDFMEVIEENPNLRGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + +E+D IGAVN I I RQ GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLNELDPDTAKIGAVNVIKIIRQQKGKVKLIGYNSDIIGFTQSIQPLLQAH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G V +RT+ A +
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESVFVSRTHK------------ADGM 159
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 160 LTYEELTPEIMAEYTVIVNCTPVGMFPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA + +GLEM + QA+ +E
Sbjct: 220 KGEAQGAVVKNGLEMLLLQAFAAWE 244
>gi|418412007|ref|ZP_12985273.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
gi|410891590|gb|EKS39387.1| shikimate dehydrogenase [Staphylococcus epidermidis BVS058A4]
Length = 269
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 140/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFRSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ ++ +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 111 -IYESIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|407722348|ref|YP_006842010.1| shikimate dehydrogenase [Sinorhizobium meliloti Rm41]
gi|418402598|ref|ZP_12976107.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti CCNWSX0020]
gi|359503426|gb|EHK75979.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti CCNWSX0020]
gi|407320580|emb|CCM69184.1| Shikimate dehydrogenase [Sinorhizobium meliloti Rm41]
Length = 286
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 138/270 (51%), Gaps = 27/270 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTY---SSNDFAGFSCTIP 313
+ G PV HS+SP+++ K G G + H + + F DF G + TIP
Sbjct: 14 VTGYPVKHSRSPLIHGHWLKQFGIRGSYRAHEVTPEAFPDFMRQIKEGRTDFCGGNVTIP 73
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA + D D ++ +GA N + DGK+ NTD G ++ +++ +G +S
Sbjct: 74 HKEAAFRLADRPDELSAELGAANTLW--LEDGKIRATNTDGRGFVANLDERAKGWDRISA 131
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG--HALS 430
V ++GAGGA +A+ + +G + + + NRT +RARELA+ G HA S
Sbjct: 132 AV----------ILGAGGASRAVIQAIRDRGVKTIHVVNRTPERARELADRFGTAVHAHS 181
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLR 487
+A L G+ + NTTS+GM D P P L A+V D VY P T LLR
Sbjct: 182 MAALPEVVSGAGLFV-NTTSLGM----DGEPAPAIDFSGLAPDAVVTDIVYVPLKTPLLR 236
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+AEE G IV GL M + QA +E++ GL
Sbjct: 237 QAEEQGFRIVDGLGMLLHQAVPGFEKWFGL 266
>gi|89100813|ref|ZP_01173665.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89084459|gb|EAR63608.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 279
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 144/270 (53%), Gaps = 21/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+F +IG P+GHS SP ++N+ F G + +V L V +D+ + + AGF+ T
Sbjct: 3 KLFAVIGDPIGHSMSPAMHNDLFGIYGLDACYVPLKVRREDLGDAVKGLRAIGVAGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + DE+D +A++IGAVN ++ + DGKL GYNTD G + + +
Sbjct: 63 VPHKTEIMPFLDEIDQLAEAIGAVNTVLNK--DGKLIGYNTDGEGYVRGLASEV------ 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAET----VGG 426
+ K ++ GAGGA KA+ Y KG + + I NRT +A LA+ V
Sbjct: 115 -----PDFSRKKILIAGAGGAAKAIYYTLAQKGVQAIDICNRTAAKAEALADKCPFPVRT 169
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
AL E E +I+ TT IGM P V+ P + L A V D +Y P T+ L
Sbjct: 170 DALGFQQAEEKLAEYDIII-QTTPIGMLPDVNALPFGLYNLKAGAFVSDIIYNPLETKFL 228
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
REA+ GA+I +GL+MF+ Q +ER+TG
Sbjct: 229 REAKNKGASIQNGLKMFVCQGALAFERWTG 258
>gi|70726320|ref|YP_253234.1| shikimate dehydrogenease [Staphylococcus haemolyticus JCSC1435]
gi|123660361|sp|Q4L6U7.1|AROE_STAHJ RecName: Full=Shikimate dehydrogenase
gi|68447044|dbj|BAE04628.1| shikimate dehydrogenease [Staphylococcus haemolyticus JCSC1435]
Length = 268
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
+ +IG PV HS SP+++ FKS+ + +H+ D N GF+ TIP
Sbjct: 3 YAVIGDPVSHSLSPVMHQVNFKSLNMEDTYEALHIPTQDFHDIRHIIEDNHINGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE++ AK++GAVN + + + K GYNTD +G + ++
Sbjct: 63 HKERIIPYLDEINDQAKAVGAVNTV--KIINNKWIGYNTDGIGYVMGLKQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +A +K ++ IANRT R + +A+SL
Sbjct: 111 -VYPDLENAYVLILGAGGASKGIANELSKIVQPKLTIANRTMSRFETWDMDI--NAISLE 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
E + E +I+ NTTS G+ D+ I L LV D +Y P T+ L+EAE
Sbjct: 168 QSEQYLDEFDIII-NTTSAGLNNN-DDIVISLDNLSSSTLVSDIIYIPYKTKFLKEAEFK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G T+ +GL+MFI Q E ++ +TG
Sbjct: 226 GNTVYNGLDMFINQGAESFKIWTG 249
>gi|296109340|ref|YP_003616289.1| shikimate 5-dehydrogenase [methanocaldococcus infernus ME]
gi|295434154|gb|ADG13325.1| shikimate 5-dehydrogenase [Methanocaldococcus infernus ME]
Length = 277
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 148/275 (53%), Gaps = 21/275 (7%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDF--A 306
M TK+ G+IG PV HS SP+++N AFK N V++ V F +
Sbjct: 1 MDAKTKLVGLIGHPVEHSLSPVMHNAAFKDKNLNYVYLAFDVKPERLRFVVDGAKALGMV 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
GF+ TIPHK +K D++ AK IGAVN + + D GYNTD +GA A+E+ +
Sbjct: 61 GFNVTIPHKVEIIKYLDQLSEEAKLIGAVNTV--KIEDDIAIGYNTDGIGARRALEEEI- 117
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG- 425
+ K V+ GAGGA +A+A+ AK VVIANRT ++A++LA+ +
Sbjct: 118 ----------GKVKDKKIVIFGAGGAARAVAFEL-AKDNFVVIANRTLEKAKKLAKEIEE 166
Query: 426 --GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVYTPKI 482
+ +DL N + ED I+ N T +GM P V+E PI K L +V D VY P
Sbjct: 167 KLNREVGYSDL-NVDLEDVDIVINATPVGMYPNVNEKPIVSKERLRKDMVVMDLVYNPLE 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA++ GA + GL M I Q E ++ +TG+
Sbjct: 226 TTLLKEAKKVGAKTIDGLGMLIYQGAEAFKIWTGV 260
>gi|29726767|pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
gi|29726768|pdb|1NVT|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
Length = 287
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 143/276 (51%), Gaps = 27/276 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SPI++N AFK G N V+V +L +++ + GF+
Sbjct: 11 TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A+ IGAVN I + DGK GYNTD +GA A+E+ + GR+
Sbjct: 71 TIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI-GRVK 127
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----- 425
+VI G AK ++IANRT ++A LA+ +
Sbjct: 128 DKN-----------IVIYGAGGAARAVAFELAKDNNIIIANRTVEKAEALAKEIAEKLNK 176
Query: 426 --GHALSLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 481
G + + L+ DG+ I+ N T IGM P +D PI K L +V D +Y P
Sbjct: 177 KFGEEVKFSGLD--VDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPL 234
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA++ A ++GL M I Q ++ +TG+
Sbjct: 235 ETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGV 270
>gi|323345648|ref|ZP_08085871.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
gi|323093762|gb|EFZ36340.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
Length = 248
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + +++ + DI F + +SN D G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFENEGIDAKYINFEIPDIKDFPEILASNTDLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + D + AK+IGAVN I GK L G+N+D +G +IE L
Sbjct: 64 KEKVIDYLDSLSPEAKAIGAVNVIRVTHKGGKIVLKGFNSDVIGFTKSIEPILESY---- 119
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ YG K+ G + A+R+ +A+
Sbjct: 120 --------HKKALILGTGGASKAIDYGLKSLGLETLFASRSNKP----------NAIQYK 161
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
D+ ++ ++ N T +GM P D P +P + ++ L++D +Y P T +++ E
Sbjct: 162 DITADTVKEYNVIVNCTPLGMYPHADSCPQLPYETMDNHTLLYDLIYNPDETLFMKKGLE 221
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
GAT+ +GLEM + QA+ +E + G
Sbjct: 222 HGATVKNGLEMLLLQAFASWEFWHG 246
>gi|332157961|ref|YP_004423240.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
gi|331033424|gb|AEC51236.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
Length = 273
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 146/267 (54%), Gaps = 21/267 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TKV+G+IGKPV HS SPI++N F+ N V++ V+ + + G +
Sbjct: 7 TKVYGLIGKPVRHSLSPIMHNALFEKYNINAVYLAFEVELGRLRDAIMGAKALGIMGLNV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHK K DE+ A+ IG+VN I DG+L GYNTD +GA A+E
Sbjct: 67 TMPHKVEVTKFLDELSDEAREIGSVNTIA--NEDGRLVGYNTDGIGARKALER------- 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ + G +++GAGGAG+A+AY +K A VV+ NRT ++A+EL E G S
Sbjct: 118 -----VTEVEGSKVLILGAGGAGRAIAY-ELSKVAEVVVLNRTLEKAKEL-EKFGVKGDS 170
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L +L + E IL N TS+GM + + +PK+ L +V D VY P +TRLLR+A
Sbjct: 171 LEELPYY-IEWADILINATSVGMGE--ERSIVPKNLLRPSLVVMDIVYKPLLTRLLRDAR 227
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
G V GL M + Q E ++ +TG+
Sbjct: 228 SMGCVTVDGLWMLVYQGAESFKIWTGV 254
>gi|449095061|ref|YP_007427552.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
gi|449028976|gb|AGE64215.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
Length = 280
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLENAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|299738904|ref|XP_001834882.2| arom polypeptide [Coprinopsis cinerea okayama7#130]
gi|327507748|sp|A8NMB4.2|ARO1_COPC7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|298403528|gb|EAU86952.2| arom polypeptide [Coprinopsis cinerea okayama7#130]
Length = 1677
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 242/551 (43%), Gaps = 107/551 (19%)
Query: 49 GADLVEIRLDGLKNFNP-----------RENIKTLIKESPVPTLFTYRPIWEGGQY-DGD 96
GAD +E+R+D LK+ ++ + L + + +P ++T R +GG + DG+
Sbjct: 1132 GADALELRVDLLKDAKAPEAPFPSVAYVKDQVTALRRVTGLPIIYTVRTKAQGGAFPDGN 1191
Query: 97 ENERVDVLRLAMELGADYIDVELQVAREFND------SIRGKKPEKCKVIVSSHNY--QY 148
E +++ + LG +Y+DVE VA F+D S R KK VI S H++ +
Sbjct: 1192 AKEYKELVEAGVRLGVEYLDVE--VASIFSDKEVADLSKRTKKAGSTLVIASWHDWSGKM 1249
Query: 149 TPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-----ITVHSQVPIIGLVMGE 203
ED+ + G D+VK A + D ++ ++ + PII + M
Sbjct: 1250 QWDGEDVKRKYDEARKFG-DLVKIVGKAEKLEDNFKLLSFVKSATSLPNSPPIIAINMST 1308
Query: 204 RGLISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
G SRIL TF + + ++ +APGQ + K + + + P +K F + G
Sbjct: 1309 LGQSSRILNT------TFTPVSHPLLPTKAAPGQLSFKQIQQALHLLGLLP-SKHFHLFG 1361
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTYSSND-FAGFSCTIPHK 315
P+ HS SP L+N F+ +G F + L++ D + S + F G S TIP K
Sbjct: 1362 TPIAHSMSPTLHNTGFELLGLP--FKYGLLESKEVDCKEVRDVISDKEGFGGASVTIPFK 1419
Query: 316 EAAVKCCDEVDTVAKSIGAVNCII-----------RRQSDGKLFGYNTDYVGAISAI--- 361
++ DE+ AK IGAVN II + ++ L G NTD+VG I
Sbjct: 1420 VDVIELLDELTESAKEIGAVNTIIPVHRSSINAQGQEETTRVLVGDNTDWVGIRVCITQR 1479
Query: 362 --EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAR 418
E LR N SG +VIGAGG +A Y + G V+ + NRT ++A
Sbjct: 1480 VSEGELRNE-NTSG-----------LVIGAGGTARAAIYALQDLGVPVIYLFNRTKEKAE 1527
Query: 419 ELAETVGGHAL-----SLADLENFN-----------------PEDGMILANTTSIGMQPK 456
+LA+ G A L L+ P L + ++ + +
Sbjct: 1528 DLAKAFVGGADKKWNGQLVVLDKLGGGWGDVGVAPRVIVSTVPASATALPSASTAAIAGQ 1587
Query: 457 VDETP----IPKHALGHY---ALVFDAVYTPKITRLLREA----EESGATIVSGLEMFIG 505
VD++ +P + A+V D Y P T LL+ A EE V GLE+ +
Sbjct: 1588 VDKSTNQIVLPADVFAYTSGSAVVVDMAYKPAETPLLKLAKELKEEGNWACVQGLEVLLE 1647
Query: 506 QAYEQYERFTG 516
Q Y Q+E++TG
Sbjct: 1648 QGYIQFEKWTG 1658
>gi|241954088|ref|XP_002419765.1| pentafunctional AROM polypeptide, putative [Candida dubliniensis
CD36]
gi|327507655|sp|B9WFG1.1|ARO1_CANDC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|223643106|emb|CAX41980.1| pentafunctional AROM polypeptide, putative [Candida dubliniensis
CD36]
Length = 1550
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 227/492 (46%), Gaps = 44/492 (8%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
GAD VE+R+D LK+ + I T K + +P ++T R + +GG++ D + +E +L
Sbjct: 1066 GADAVELRVDLLKDTSAAFVAAQIATTRKHADLPIIYTVRTVSQGGKFPDENVDELKSLL 1125
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH---NYQYTPSVEDLSNLVAR 161
L + LG YID++L E + I KK I+ ++ N + + + N +
Sbjct: 1126 LLGIRLGVAYIDLQLTAPNELIEEISSKK--GFTRIIGTYQDINGELKWNNVEWKNKYNQ 1183
Query: 162 IQASGADIVKFATTALDITDVARVFQITVHSQV-PIIGLVMGERGLISRILCAKFGGFLT 220
+ ADIV+ A I D + + + P+I +G +G +S++L F ++
Sbjct: 1184 GVSMNADIVRLVGRANSIQDNLDLEDFKKQNTLKPLIAFNLGTQGKLSQVLNGTFTP-IS 1242
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
L N G TI ++ Y F G K F +IG P+ HS+SP L+N +K++
Sbjct: 1243 HQLLPND----DGLLTIGEINQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALN 1297
Query: 281 FNGVFVHLLVDDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII 339
F D+ + + +DF G + T+P K +K ++ A++IGAVN +I
Sbjct: 1298 LPYQFGRFEATDVDVVYDNLINKSDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI 1357
Query: 340 RRQSDGKLFGYNTDYVG-AISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY 398
+G FG NTD+VG + S I G+ + + +G +V+GAGG +A Y
Sbjct: 1358 --PVEGGYFGDNTDWVGISNSFIRAGVPPKSSSNG-----------LVVGAGGTSRAAIY 1404
Query: 399 GAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGMILANTTSIGMQPK 456
G ++ + NRT + EL ++ + L + + E + +L + I
Sbjct: 1405 ALHQMGCTKIYLVNRTVAKLEELVKSFPKDYNLEIVETEQQADKVNKVLLAVSCIPADKP 1464
Query: 457 VDETPIPK----------HALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIG 505
+D + K G + +A Y P++T +++ AEE ++ G+EM +
Sbjct: 1465 LDSDVLKKIERILSNGSEQVAGFKPTLLEASYKPRVTPIMKLAEEQYKWKVIPGVEMLVN 1524
Query: 506 QAYEQYERFTGL 517
Q Q++ TG
Sbjct: 1525 QGDRQFKLHTGF 1536
>gi|110799915|ref|YP_695145.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
gi|123148920|sp|Q0TT95.1|AROE_CLOP1 RecName: Full=Shikimate dehydrogenase
gi|110674562|gb|ABG83549.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
Length = 271
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 142/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE N E +I NTT GM P ++ + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEINEEFALI--NTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|304380807|ref|ZP_07363474.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|422742620|ref|ZP_16796623.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422746110|ref|ZP_16800043.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|304340683|gb|EFM06616.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|320140518|gb|EFW32372.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144056|gb|EFW35825.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 272
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 7 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELEGFNITIP 66
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 67 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 114 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 171
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 172 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 229
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 230 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 260
>gi|257875721|ref|ZP_05655374.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257809887|gb|EEV38707.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 286
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 144/280 (51%), Gaps = 30/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ G + V++ V DD+A Q+ D G +
Sbjct: 6 TRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE A+ IGA+N I+ ++ G+L G+NTD +G + A+ED
Sbjct: 66 SMPHKMAAVALMDECSPAAELIGAINTIVNQE--GRLIGHNTDGIGFMRALED------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT-------YDRARELAE 422
+ ++ G VIGAGGA A+ A G + + + NR ++ ++A+
Sbjct: 117 ----IQVSIIGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEKLTQIAQ 172
Query: 423 TVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
++L DLE+ + +L N T +GM+P +P+ L +L V+D
Sbjct: 173 KTACE-ITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESLAVYDV 231
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y P+ T+LL++A+ GA +GL M + Q +E +TG
Sbjct: 232 IYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTG 271
>gi|221310491|ref|ZP_03592338.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314815|ref|ZP_03596620.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319737|ref|ZP_03601031.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324015|ref|ZP_03605309.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767590|ref|NP_390444.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|418032255|ref|ZP_12670738.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430756355|ref|YP_007208894.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915012|ref|ZP_21963638.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
gi|251757241|sp|P54374.2|AROE_BACSU RecName: Full=Shikimate dehydrogenase
gi|225185218|emb|CAB14508.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471118|gb|EHA31239.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959814|dbj|BAM53054.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|407965389|dbj|BAM58628.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7003]
gi|430020875|gb|AGA21481.1| Shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115360|gb|EME05756.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
Length = 280
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|448360171|ref|ZP_21548813.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
gi|445640121|gb|ELY93211.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
Length = 278
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 144/275 (52%), Gaps = 26/275 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
VFG++G PVGHS+SP ++ A+ + ++ +V D D+ + G + T
Sbjct: 2 NVFGLLGNPVGHSRSPPMHEAAYDELTYDARYVTFEPDPSDLEAAVAGADALGITGLNVT 61
Query: 312 IPHKEAAVKC-CDEVDTVAKSIGAVNCI------IRRQSDGKLFGYNTDYVGAISAIEDG 364
IP K+ ++ E D +A IGAVN I R S G+ G+NTD GA+ A+ +
Sbjct: 62 IPFKQDVLELDLVEADELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRALREH 121
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
+AG VV+GAGGAG+A+++ GA V IANRT A ELA V
Sbjct: 122 -----------DVTVAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHELAADV 170
Query: 425 ---GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
GH L LE+ D IL N TS+GM+ DETP+P AL V DAVY P
Sbjct: 171 PDATGHGLDEGVLESL-LADADILVNATSVGME--ADETPVPADALHGDLAVMDAVYQPL 227
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRLLR+A ++GAT V G M + Q E +E +TG
Sbjct: 228 ETRLLRDATDAGATTVDGAWMLLYQGVEAFELWTG 262
>gi|387780687|ref|YP_005755485.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
LGA251]
gi|344177789|emb|CCC88268.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
LGA251]
Length = 268
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D +D A + GAVN ++ + DGK GYNTD VG + +
Sbjct: 63 HKERIIPYLDHIDEQAINAGAVNTVLIK--DGKWIGYNTDGVGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D +Y P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIIYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|392576505|gb|EIW69636.1| hypothetical protein TREMEDRAFT_44120 [Tremella mesenterica DSM 1558]
Length = 1595
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 229/515 (44%), Gaps = 79/515 (15%)
Query: 49 GADLVEIRLDGLKNFNPR----------------ENIKTLIKESPVPTLFTYRPIWEGGQ 92
GAD +E+R D L NP + L + +P +++ R +GG
Sbjct: 1095 GADAIELRADLL---NPTGQVVNAPSIPSLEYVGRQLSLLRLVTNLPIVYSVRSKEQGGF 1151
Query: 93 YDGDENERVD-VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YT 149
+ D+ + + + L + +Y+D+E+ DSI + + +I S H++
Sbjct: 1152 FPSDQPDAYEETVILGLRSACEYVDMEVAWPVPVMDSIVSHRGQS-HIIASWHDWSGSMK 1210
Query: 150 PSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHS----QVPIIGLVMGERG 205
S ++ N G DIVK TA +D ++ Q+ V S P++ + MGE G
Sbjct: 1211 WSSHEVRNKYIECAKYG-DIVKIVGTAKTSSDNSQ-LQLFVSSLSPNSKPLLAINMGELG 1268
Query: 206 LISRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
+SRI L + + ++ +APGQ ++K++L + M P K F I G P
Sbjct: 1269 QLSRITN------LILTPITHPLLPSRAAPGQLSVKEILLARHLIGMLPSKK-FYIAGSP 1321
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHL---LVDDIAKFFQTYSSNDFAGFSCTIPHKEAAV 319
+ HS SP L+N AFK+ G+ V+ L +DD +F + S++ G S T+P K +
Sbjct: 1322 ISHSMSPTLHNAAFKACGYPHVYTRLEAATIDD--EFLEILHSDETGGMSITMPLKLLIM 1379
Query: 320 KCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
D V A+ +GAVN +I +GK L G NTD+ A L S
Sbjct: 1380 DHLDSVSPDARLLGAVNTVIPSIRNGKRWLHGENTDWQAIYEAASTNLP-----SSSSKQ 1434
Query: 378 ALAGKLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
L G +VIGAGG + AL +K R+ + NRT A ++ + +
Sbjct: 1435 TLEG---LVIGAGGTCRAALMALHTSKAKRIYLYNRTLSNAEKVKSSFP---------KE 1482
Query: 437 FNPEDGMILANTTSIGMQPKVDETPIPKHAL---------------GHYALVFDAVYTPK 481
FN E L+ + + +P+V + +P +L G + D Y P+
Sbjct: 1483 FNIEIIDDLSIISHLDQKPQVIISTVPGESLTLKEGQGIYLSESIFGEEGVAIDLAYKPR 1542
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T L++ AE+ G VSG+E+ Q Y+Q+E + G
Sbjct: 1543 KTALIQLAEKKGWKAVSGIEILCLQGYKQHELWMG 1577
>gi|145577923|gb|ABP82680.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 142/248 (57%), Gaps = 20/248 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGHALSLADLENFN 438
++IGAGGA +A+ + G + + IANRT D+A+ L V HALS ++ N
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALS-SECAAEN 167
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
+ I+ TT+IGM P V+ TP+ +L +V D +Y P T++L +A+E GA I +
Sbjct: 168 QGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQN 227
Query: 499 GLEMFIGQ 506
G++MF+ Q
Sbjct: 228 GIDMFVYQ 235
>gi|433654873|ref|YP_007298581.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293062|gb|AGB18884.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 283
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 151/280 (53%), Gaps = 26/280 (9%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
+ T ++GIIG P+GHS SP+L+N AF+S+ N V++ V +++ +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPLLHNAAFESINLNSVYISFDVYEENLKDAILGIKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDG 364
G + T+PHKE +K D V AK IGAVN I + ++G L GYNTD G +I E G
Sbjct: 62 KGINVTVPHKENVIKYLDYVSDEAKLIGAVNTI--KNNNGILEGYNTDVTGFTESIKEHG 119
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAET 423
+ + GK V++GAGGA +A+A G G R ++IANR+ +RA+ L++
Sbjct: 120 ME------------VEGKNAVILGAGGAARAIAVGLSLTGVRSIIIANRSKERAKNLSDY 167
Query: 424 VGGHA------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
+ + ++ DL D IL N TS+GM P ++ +P+ ++ + V+D +
Sbjct: 168 IKNNLDINCTDVTYDDLNELKEID--ILINATSVGMSPNINLSPVDENVVVKAKFVYDII 225
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P+ T L AE+ ++G +M I QA ++ +TG+
Sbjct: 226 YNPEKTLFLSYAEKHKIRNLNGFDMLINQANHSFKIWTGV 265
>gi|422342123|ref|ZP_16423063.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
gi|325474191|gb|EGC77379.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
Length = 771
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 229/525 (43%), Gaps = 70/525 (13%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
T +C+ + ++++K + + K D+ E+R+D L N + ++ + + +P + T
Sbjct: 281 TKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYL-NQSEILYLRNFPERAGIPCILT 338
Query: 84 YRPIWEGGQYDGDENERVDVLRLAMELG-AD------YIDVEL--------QVAREFNDS 128
R +GG + G E R+ + + AD YID+E + AR F+
Sbjct: 339 VRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSSGIEEAARAFD-- 396
Query: 129 IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASG---ADIVKFATTALDITDVARV 185
K+I S H S + N+V I+ DI K A TA + DV+ +
Sbjct: 397 --------IKIIRSLH------SKVPVKNIVKTIEGLSRFETDIPKLAFTANCLNDVSEL 442
Query: 186 FQIT--VHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD---L 240
F+ + + +Q I+ VMG GL SRIL K + + I + + D L
Sbjct: 443 FKASKLIKNQEYILS-VMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETL 501
Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
+LY F ++ +T ++G+IGK V S SP ++N+ FK N V++ + +
Sbjct: 502 EELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFA 561
Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
+ G S T P K + + + +K IGAVN +I + K FGYNTD G A
Sbjct: 562 NLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLI--TENKKWFGYNTDVDGFQQA 619
Query: 361 I-----EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415
+ E LR G A V+ G + I NRT +
Sbjct: 620 LMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAE 665
Query: 416 RARELAETVGGHALSLADLENFNPED----GMILANTTSIGMQPKVDETPIPKHALGHYA 471
+A+ +AE + A L+ N + ++ TT+ GM+P + P+ +
Sbjct: 666 KAKNIAE---KYKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKE 722
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VF+ +Y P+ T++L+ A +G + +G +M QAY Q++ F G
Sbjct: 723 KVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAG 767
>gi|420206086|ref|ZP_14711596.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
gi|394277925|gb|EJE22242.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM008]
Length = 269
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQNIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|418631434|ref|ZP_13193897.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
gi|374835325|gb|EHR98941.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU128]
Length = 269
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQLQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G + +GL+ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDGIGYV----NGLK---QIYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + IANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMYGNKDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|145577959|gb|ABP82698.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 140/249 (56%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
EV +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 EVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A L V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V TP+ +L +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|57651988|ref|YP_186492.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus COL]
gi|87160694|ref|YP_494250.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195405|ref|YP_500209.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221710|ref|YP_001332532.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509824|ref|YP_001575483.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141133|ref|ZP_03565626.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258450576|ref|ZP_05698638.1| shikimate 5-dehydrogenase [Staphylococcus aureus A5948]
gi|262048595|ref|ZP_06021478.1| shikimate dehydrogenease [Staphylococcus aureus D30]
gi|282920144|ref|ZP_06327869.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9765]
gi|284024654|ref|ZP_06379052.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus 132]
gi|294848626|ref|ZP_06789372.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9754]
gi|379014804|ref|YP_005291040.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
VC40]
gi|384870136|ref|YP_005752850.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus T0131]
gi|385781881|ref|YP_005758052.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143201|ref|YP_005731594.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
TW20]
gi|415686214|ref|ZP_11450351.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus CGS01]
gi|417649274|ref|ZP_12299078.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21189]
gi|417901020|ref|ZP_12544897.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21266]
gi|418276948|ref|ZP_12891702.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21178]
gi|418285651|ref|ZP_12898319.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21209]
gi|418318509|ref|ZP_12929911.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21232]
gi|418571872|ref|ZP_13136092.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21283]
gi|418574411|ref|ZP_13138580.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21333]
gi|418579520|ref|ZP_13143615.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418641702|ref|ZP_13203907.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-24]
gi|418648407|ref|ZP_13210451.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-88]
gi|418650435|ref|ZP_13212453.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-91]
gi|418659226|ref|ZP_13220914.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-111]
gi|418873196|ref|ZP_13427506.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-125]
gi|418903902|ref|ZP_13457943.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418912206|ref|ZP_13466187.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG547]
gi|418925855|ref|ZP_13479757.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928945|ref|ZP_13482831.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418955541|ref|ZP_13507478.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-189]
gi|424785431|ref|ZP_18212234.1| Shikimate 5-dehydrogenase I alpha [Staphylococcus aureus CN79]
gi|440707281|ref|ZP_20887980.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21282]
gi|440735046|ref|ZP_20914657.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|71152253|sp|Q5HFG5.1|AROE_STAAC RecName: Full=Shikimate dehydrogenase
gi|122539390|sp|Q2FXY1.1|AROE_STAA8 RecName: Full=Shikimate dehydrogenase
gi|123485582|sp|Q2FGC8.1|AROE_STAA3 RecName: Full=Shikimate dehydrogenase
gi|172048916|sp|A6QHD8.1|AROE_STAAE RecName: Full=Shikimate dehydrogenase
gi|189046324|sp|A8Z4D5.1|AROE_STAAT RecName: Full=Shikimate dehydrogenase
gi|57286174|gb|AAW38268.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus COL]
gi|87126668|gb|ABD21182.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202963|gb|ABD30773.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150374510|dbj|BAF67770.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368633|gb|ABX29604.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861734|gb|EEV84533.1| shikimate 5-dehydrogenase [Staphylococcus aureus A5948]
gi|259163242|gb|EEW47801.1| shikimate dehydrogenease [Staphylococcus aureus D30]
gi|269941084|emb|CBI49469.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
TW20]
gi|282594492|gb|EFB99477.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9765]
gi|294824652|gb|EFG41075.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9754]
gi|315198707|gb|EFU29035.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus CGS01]
gi|329314271|gb|AEB88684.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus T0131]
gi|329728380|gb|EGG64817.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21189]
gi|341846179|gb|EGS87376.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21266]
gi|364522870|gb|AEW65620.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
11819-97]
gi|365169461|gb|EHM60709.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21209]
gi|365173931|gb|EHM64360.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21178]
gi|365242972|gb|EHM83667.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21232]
gi|371978364|gb|EHO95613.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21283]
gi|371979138|gb|EHO96373.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21333]
gi|374363501|gb|AEZ37606.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
VC40]
gi|375018157|gb|EHS11737.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-24]
gi|375026320|gb|EHS19703.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-88]
gi|375027721|gb|EHS21079.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-91]
gi|375036224|gb|EHS29302.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-111]
gi|375366387|gb|EHS70384.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-125]
gi|375370627|gb|EHS74425.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-189]
gi|377697547|gb|EHT21902.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377722463|gb|EHT46589.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG547]
gi|377738857|gb|EHT62866.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742917|gb|EHT66902.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744924|gb|EHT68901.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG2018]
gi|421956841|gb|EKU09170.1| Shikimate 5-dehydrogenase I alpha [Staphylococcus aureus CN79]
gi|436431141|gb|ELP28495.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506037|gb|ELP41876.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21282]
Length = 268
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELEGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|1303789|dbj|BAA12445.1| AroD [Bacillus subtilis]
Length = 280
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTFVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|325297310|ref|YP_004257227.1| shikimate dehydrogenase [Bacteroides salanitronis DSM 18170]
gi|324316863|gb|ADY34754.1| Shikimate dehydrogenase substrate binding domain protein
[Bacteroides salanitronis DSM 18170]
Length = 247
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 25/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K FG+IG P+GHS S +NE F S + +++ + I F + + N D G + TI
Sbjct: 2 KKFGLIGYPLGHSFSKNFFNEKFASENIDAQYINFEIPTIEDFPKVVTMNPDLCGLNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG--KLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + D VD VA IGAVN I Q G KL GYN+D +G +IE L
Sbjct: 62 PYKEKVISFLDRVDPVAAKIGAVNVIKFEQVKGKLKLAGYNSDVIGFTRSIESLLESY-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GG+ KA+ YG K G + +R + +T+ L+
Sbjct: 120 ----------HKKALILGTGGSSKAINYGLKELGLETLFVSRN----QHNEQTITYDELT 165
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++ + ++ N T +GM P+ D+ P IP L L++D +Y P T +++
Sbjct: 166 PEIMDEYK-----VIVNCTPVGMYPQADQCPNIPYECLTSKHLLYDLLYNPDTTLFMKKG 220
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
+ GA + +GLEM + QA+ +E
Sbjct: 221 SDRGAAVKNGLEMLLLQAFGSWE 243
>gi|379021377|ref|YP_005298039.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
M013]
gi|359830686|gb|AEV78664.1| Shikimate 5-dehydrogenase I alpha [Staphylococcus aureus subsp.
aureus M013]
Length = 268
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDNTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|384176190|ref|YP_005557575.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595414|gb|AEP91601.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 280
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK IGAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E + +I+ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEERLGQYDVII-HTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|57867066|ref|YP_188739.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251811012|ref|ZP_04825485.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|282875976|ref|ZP_06284843.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|417913720|ref|ZP_12557383.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|418606026|ref|ZP_13169322.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|418609480|ref|ZP_13172632.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|418612796|ref|ZP_13175820.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|418625281|ref|ZP_13187934.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|418626391|ref|ZP_13189003.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|418629399|ref|ZP_13191907.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|419769474|ref|ZP_14295568.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771800|ref|ZP_14297846.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|420165585|ref|ZP_14672276.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|420170302|ref|ZP_14676863.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|420172648|ref|ZP_14679147.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|420197474|ref|ZP_14703198.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|420202365|ref|ZP_14707958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|420209101|ref|ZP_14714539.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|420211257|ref|ZP_14716631.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|420227385|ref|ZP_14732154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|421606910|ref|ZP_16048161.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
gi|71152254|sp|Q5HNV1.1|AROE_STAEQ RecName: Full=Shikimate dehydrogenase
gi|57637724|gb|AAW54512.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251805522|gb|EES58179.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|281295001|gb|EFA87528.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|341654742|gb|EGS78480.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|374407694|gb|EHQ78546.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|374409465|gb|EHQ80256.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|374817873|gb|EHR82048.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|374825423|gb|EHR89359.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|374832825|gb|EHR96530.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|374834102|gb|EHR97762.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|383358093|gb|EID35554.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360619|gb|EID38014.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|394235386|gb|EJD80958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|394240640|gb|EJD86063.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|394241809|gb|EJD87218.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|394266281|gb|EJE10927.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|394269773|gb|EJE14303.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|394279329|gb|EJE23637.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|394281710|gb|EJE25936.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|394297191|gb|EJE40800.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|406657379|gb|EKC83767.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
Length = 269
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|322692954|gb|EFY84835.1| pentafunctional AROM polypeptide [Metarhizium acridum CQMa 102]
Length = 1570
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 229/542 (42%), Gaps = 93/542 (17%)
Query: 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLF 82
+ VP + ES+ + + + G+D VEIR+D L +++ E + L S +P +F
Sbjct: 1056 LTVPKLNESLHAI-----SSASVGSDAVEIRVDLLDDWSLEAVTEQLSLLRFVSKLPVIF 1110
Query: 83 TYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVEL----QVAREFNDSIRGKKPEKC 137
T R + +GG++ D + R D+ RLA+ LG +Y+D E+ ++ +E +S R
Sbjct: 1111 TVRTVSQGGRFPDAANDHRYDLYRLALRLGVEYLDAEVTSTDEILQELTESRRNT----- 1165
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF----------- 186
+IVSSH + PS + A V F AL DV ++
Sbjct: 1166 -LIVSSH---HDPS--------GSLSWKNASWVPFYNRALQYGDVIKLVGNAKSIEDNFD 1213
Query: 187 ------QITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN-GIVSAPGQPTIKD 239
++ + PII + MG G +SRIL GFLT + N +APGQ + +
Sbjct: 1214 LANFKSRMMADHKTPIIAINMGVAGQLSRIL----NGFLTPVSHPNLPFKAAPGQLSASE 1269
Query: 240 LLD----LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAK 295
+ L R+ + F + G P+ S+SP L+N F G +
Sbjct: 1270 IRQGRALLGQIRK-----REFYLFGSPISQSRSPALHNALFGITGLPHEYHLHETSSAEN 1324
Query: 296 FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD-----GKLFGY 350
+ S F G S TIP K + DE+ A++IGAVN II D +L G
Sbjct: 1325 LGEVLHSESFGGASVTIPLKRDVMALVDELTPAAQAIGAVNTIIPLNDDISSNRRRLLGD 1384
Query: 351 NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVI 409
NTD+ G + + + GV S + + VIG+GG +A Y G + +
Sbjct: 1385 NTDWKGMVYTLSE---------AGVISPVQNESAAVIGSGGTTRAAIYALHFMGFDTIYV 1435
Query: 410 ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH 469
R + LA A E D LA++ S+ + + PI G
Sbjct: 1436 VGRDAHKVNTLASEFPRDYNVNAITEQAQAAD---LAHSPSVIISTIPADQPIDDGVKGA 1492
Query: 470 Y-------------ALVFDAVYTPKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFT 515
++ + Y P T++++ AE + T++ GLE+ Q + Q+E +T
Sbjct: 1493 VFTLLSLSAVSRVKRVLLEMAYKPHHTQIVQMAESTSTWTVIPGLEVLASQGWYQFEAWT 1552
Query: 516 GL 517
G+
Sbjct: 1553 GI 1554
>gi|229597718|pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis
gi|229597719|pdb|3DOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis Complexed With Shikimate
Length = 277
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|451822103|ref|YP_007458304.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788082|gb|AGF59050.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 147/287 (51%), Gaps = 29/287 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSND 304
+++ T ++ +IG PV HS SP +YN +F+ +G + +V + + ++ + + +
Sbjct: 3 KRISGSTALYCLIGSPVDHSGSPAMYNYSFQKLGIDSAYVAFDISEEKVSDAIAAFKTLN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K VK DE+ A+ IGAVN II + GKL G+ TD VG + +++
Sbjct: 63 IRGANVTMPCKSEVVKYMDELSPAARIIGAVNTIINKS--GKLTGHITDGVGFVRNLKEH 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
GV + GK+ V+GAGGA A+ GA+ + I + Y +A +
Sbjct: 121 ---------GVD--IKGKIITVLGAGGAATAIVVQCALDGAKEINIFNIKDAFYQKAEKT 169
Query: 421 AETVGGHA----LSLADLENFNPEDGMI-----LANTTSIGMQPKVDETPIPK-HALGHY 470
E + ++L DLE+ +G I L N T +GM P +E+PI +
Sbjct: 170 IENIKKEVPECVVNLCDLEDTQKLNGQIAASDILVNATRVGMHPNEEESPIKDTNVFTKE 229
Query: 471 ALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+V D VY P+ T+LL +AE G TIV G+ M + Q E ++ +TGL
Sbjct: 230 LVVADVVYNPRKTKLLEDAEAVGCTIVPGIGMLLWQGAEAFKLYTGL 276
>gi|417647121|ref|ZP_12296970.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|420184568|ref|ZP_14690677.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
gi|329725470|gb|EGG61953.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU144]
gi|394257219|gb|EJE02141.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM040]
Length = 269
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|27468200|ref|NP_764837.1| shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
gi|32129422|sp|Q8CP09.1|AROE_STAES RecName: Full=Shikimate dehydrogenase
gi|27315746|gb|AAO04881.1|AE016748_115 shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
Length = 272
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 6 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ G
Sbjct: 66 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEG------ 117
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 118 -----IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 172
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 173 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 227 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 259
>gi|242373900|ref|ZP_04819474.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis M23864:W1]
gi|242348454|gb|EES40056.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis M23864:W1]
Length = 271
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 139/264 (52%), Gaps = 20/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N F +G + + + + ++D + + GF+ TIP
Sbjct: 3 FAVIGHPISHSLSPVMHNANFSKLGLDYTYEALDIPIEDFHLIKEIITEKGLNGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE+D +K++GAVN ++ + DGK GYNTD +G ++ GLR
Sbjct: 63 HKERILPYLDEIDEQSKTVGAVNTVLIK--DGKWIGYNTDGIGYVT----GLRQ------ 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +A K ++ +ANRT R + + +A+SL
Sbjct: 111 -VYDDLESAYILILGAGGASKGIANELVKFVNPKLTVANRTMSRFNDWNLDI--NAISLE 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E++ +I+ NTT GM E+ + L ALV D VY P T +L EAE
Sbjct: 168 DAESYLDAFDIII-NTTPAGMAEN-KESVLNLKNLNTNALVSDIVYIPYKTPILEEAENK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G I +GL+MF+ Q E ++ +T
Sbjct: 226 GNPIYNGLDMFVYQGAESFKIWTN 249
>gi|386729297|ref|YP_006195680.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
71193]
gi|387602936|ref|YP_005734457.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ST398]
gi|404478946|ref|YP_006710376.1| shikimate 5-dehydrogenase [Staphylococcus aureus 08BA02176]
gi|418309961|ref|ZP_12921511.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21331]
gi|418978320|ref|ZP_13526121.1| Shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
DR10]
gi|283470874|emb|CAQ50085.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ST398]
gi|365237418|gb|EHM78264.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21331]
gi|379993936|gb|EIA15381.1| Shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
DR10]
gi|384230590|gb|AFH69837.1| Shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
71193]
gi|404440435|gb|AFR73628.1| shikimate 5-dehydrogenase [Staphylococcus aureus 08BA02176]
Length = 268
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDSYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTL--ARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|331220665|ref|XP_003323008.1| hypothetical protein PGTG_04545 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309301998|gb|EFP78589.1| hypothetical protein PGTG_04545 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1482
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 235/537 (43%), Gaps = 71/537 (13%)
Query: 36 DKMVVDMGKANASGADLVEIRLDGLK---------NFNPRE----NIKTLIKESPVPTLF 82
DK +D + G D VE+R+D L + P E + L + + +P ++
Sbjct: 942 DKTSLDRFEELTIGCDAVELRVDLLSTSGKAPTSPSIPPTEFVVKQVAALRRLTTLPIIY 1001
Query: 83 TYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
T R +GG + DG E + + G +Y+D+EL ++ E ++ +K K+I
Sbjct: 1002 TVRTCSQGGMFPDGQPEEWCKLAAMGFRTGCEYVDIELGLSPEQQKALCSQKGHS-KIIA 1060
Query: 142 SSHNYQYTPSVEDLSNLVAR---IQASGADIVKFATTALD-------ITDVARVFQITVH 191
S H++ D S ++ R ++A G D+VK + A D + + +
Sbjct: 1061 SYHDFSGRLKW-DSSEMIQRYHELKAYG-DMVKLVSRAADGLEDNLAMLEFRKKHATLQK 1118
Query: 192 SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR-QMG 250
+ +I + MG G +SRIL T L G +APGQ + + + Q+
Sbjct: 1119 DRQSLITINMGRSGQMSRILSPVLSP--TTHRLLPGPPAAPGQLSFRQIQTAQGLLGQII 1176
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL----VDDIAKFFQTYSSNDFA 306
P K F + G P+G S+SP+++ F ++G G V D + + ++DF
Sbjct: 1177 P--KQFWLFGAPIGQSRSPLIHGTGFDTLGLEGYRYQKCETSSVTD-STVLEKIHASDFG 1233
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIR-RQSDG--KLFGYNTDYVGAISAIED 363
G S TIP K +K D++ A+++GAVN I+ Q DG KL G NTD+ IE
Sbjct: 1234 GASVTIPLKVEIIKYLDQLTPDAQAVGAVNTIVPVSQRDGKIKLLGANTDWEAIKMKIEA 1293
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
L + + L VVIGAGG +A Y + G ++ I NRT +A E+A+
Sbjct: 1294 NLPAQQALGLITPGQLVRAAGVVIGAGGTARAAVYALHSLGYEQIYIHNRTRSKAEEVAQ 1353
Query: 423 TVGGH-ALSLADLENF--NPEDGM---------ILANTTSIGMQPKVDETPIPKHAL--- 467
+ + + D F + EDG+ + A T + P D+ IP H L
Sbjct: 1354 AFPSYFGIRVIDSLGFLCSGEDGVWQPSAIISAVPAQATRLSDDPPADKLEIP-HGLFDR 1412
Query: 468 --------GHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
YAL D+ + L+R V GL++ + QA Q++ +TG
Sbjct: 1413 PGGGVVIEMSYALGKDSALLRAVQDLVRWKS------VDGLQVLVQQAARQFQLWTG 1463
>gi|15924586|ref|NP_372120.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927176|ref|NP_374709.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
N315]
gi|148268079|ref|YP_001247022.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus JH9]
gi|150394148|ref|YP_001316823.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus JH1]
gi|156979914|ref|YP_001442173.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus Mu3]
gi|253315367|ref|ZP_04838580.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253732249|ref|ZP_04866414.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733153|ref|ZP_04867318.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006381|ref|ZP_05144982.2| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793672|ref|ZP_05642651.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9781]
gi|258411029|ref|ZP_05681309.1| shikimate dehydrogenease [Staphylococcus aureus A9763]
gi|258420168|ref|ZP_05683123.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9719]
gi|258437427|ref|ZP_05689411.1| shikimate dehydrogenease [Staphylococcus aureus A9299]
gi|258443633|ref|ZP_05691972.1| shikimate dehydrogenease [Staphylococcus aureus A8115]
gi|258446841|ref|ZP_05694995.1| shikimate dehydrogenease [Staphylococcus aureus A6300]
gi|258448755|ref|ZP_05696867.1| shikimate dehydrogenease [Staphylococcus aureus A6224]
gi|258453572|ref|ZP_05701550.1| shikimate dehydrogenease [Staphylococcus aureus A5937]
gi|269203223|ref|YP_003282492.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ED98]
gi|282893097|ref|ZP_06301331.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8117]
gi|282928229|ref|ZP_06335834.1| shikimate 5-dehydrogenase [Staphylococcus aureus A10102]
gi|295406719|ref|ZP_06816524.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8819]
gi|296276600|ref|ZP_06859107.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus MR1]
gi|297245699|ref|ZP_06929564.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8796]
gi|384864816|ref|YP_005750175.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|387150739|ref|YP_005742303.1| Shikimate 5-dehydrogenase I alpha; AroDI alpha [Staphylococcus
aureus 04-02981]
gi|415692714|ref|ZP_11454634.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus
CGS03]
gi|417651286|ref|ZP_12301049.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21172]
gi|417894418|ref|ZP_12538437.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21201]
gi|417898054|ref|ZP_12541980.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21259]
gi|418424744|ref|ZP_12997858.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS1]
gi|418427738|ref|ZP_13000743.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS2]
gi|418430581|ref|ZP_13003491.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433723|ref|ZP_13006315.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS4]
gi|418440118|ref|ZP_13011819.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS6]
gi|418446200|ref|ZP_13017673.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449214|ref|ZP_13020599.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452025|ref|ZP_13023359.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS10]
gi|418455019|ref|ZP_13026278.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457897|ref|ZP_13029096.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418567084|ref|ZP_13131449.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21272]
gi|418640434|ref|ZP_13202666.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-3]
gi|418652804|ref|ZP_13214767.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-99]
gi|418660821|ref|ZP_13222433.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-122]
gi|418878513|ref|ZP_13432748.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881279|ref|ZP_13435496.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884128|ref|ZP_13438321.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886860|ref|ZP_13441008.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418895358|ref|ZP_13449453.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418914697|ref|ZP_13468668.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418920676|ref|ZP_13474608.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418991523|ref|ZP_13539184.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784596|ref|ZP_14310359.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-M]
gi|424768943|ref|ZP_18196180.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus CM05]
gi|443637565|ref|ZP_21121640.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21236]
gi|54036753|sp|P63594.1|AROE_STAAN RecName: Full=Shikimate dehydrogenase
gi|54040822|sp|P63593.1|AROE_STAAM RecName: Full=Shikimate dehydrogenase
gi|166219220|sp|A7X302.1|AROE_STAA1 RecName: Full=Shikimate dehydrogenase
gi|189046322|sp|A6U268.1|AROE_STAA2 RecName: Full=Shikimate dehydrogenase
gi|189046323|sp|A5ITC3.1|AROE_STAA9 RecName: Full=Shikimate dehydrogenase
gi|13701394|dbj|BAB42688.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus N315]
gi|14247367|dbj|BAB57758.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus Mu50]
gi|147741148|gb|ABQ49446.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus JH9]
gi|149946600|gb|ABR52536.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus JH1]
gi|156722049|dbj|BAF78466.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus Mu3]
gi|253724038|gb|EES92767.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728909|gb|EES97638.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787644|gb|EEV25984.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9781]
gi|257840179|gb|EEV64643.1| shikimate dehydrogenease [Staphylococcus aureus A9763]
gi|257843879|gb|EEV68273.1| shikimate 5-dehydrogenase [Staphylococcus aureus A9719]
gi|257848632|gb|EEV72620.1| shikimate dehydrogenease [Staphylococcus aureus A9299]
gi|257851039|gb|EEV74982.1| shikimate dehydrogenease [Staphylococcus aureus A8115]
gi|257854416|gb|EEV77365.1| shikimate dehydrogenease [Staphylococcus aureus A6300]
gi|257858033|gb|EEV80922.1| shikimate dehydrogenease [Staphylococcus aureus A6224]
gi|257864303|gb|EEV87053.1| shikimate dehydrogenease [Staphylococcus aureus A5937]
gi|262075513|gb|ACY11486.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ED98]
gi|282590036|gb|EFB95118.1| shikimate 5-dehydrogenase [Staphylococcus aureus A10102]
gi|282764415|gb|EFC04541.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8117]
gi|285817278|gb|ADC37765.1| Shikimate 5-dehydrogenase I alpha; AroDI alpha [Staphylococcus
aureus 04-02981]
gi|294968466|gb|EFG44490.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8819]
gi|297177350|gb|EFH36602.1| shikimate 5-dehydrogenase [Staphylococcus aureus A8796]
gi|312829983|emb|CBX34825.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129874|gb|EFT85864.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727470|gb|EGG63926.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21172]
gi|341849556|gb|EGS90699.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21259]
gi|341852563|gb|EGS93452.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21201]
gi|371982788|gb|EHO99936.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21272]
gi|375014998|gb|EHS08669.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-3]
gi|375020972|gb|EHS14479.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-99]
gi|375040061|gb|EHS32967.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-122]
gi|377694635|gb|EHT19000.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695164|gb|EHT19528.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377714463|gb|EHT38664.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377723645|gb|EHT47770.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377725813|gb|EHT49926.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377731022|gb|EHT55080.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377757023|gb|EHT80919.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377764402|gb|EHT88255.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC348]
gi|383363806|gb|EID41132.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-M]
gi|387718026|gb|EIK06021.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS2]
gi|387718093|gb|EIK06087.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719523|gb|EIK07468.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS1]
gi|387724947|gb|EIK12578.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS4]
gi|387730268|gb|EIK17675.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS6]
gi|387735132|gb|EIK22269.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS8]
gi|387736494|gb|EIK23585.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS9]
gi|387744906|gb|EIK31670.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745072|gb|EIK31834.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387746665|gb|EIK33394.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS11b]
gi|402348334|gb|EJU83326.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus CM05]
gi|408423709|emb|CCJ11120.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408425699|emb|CCJ13086.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408427686|emb|CCJ15049.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408429675|emb|CCJ26840.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408431662|emb|CCJ18977.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408433656|emb|CCJ20941.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408435648|emb|CCJ22908.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|408437632|emb|CCJ24875.1| Shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ST228]
gi|443405348|gb|ELS63952.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21236]
Length = 268
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|321312051|ref|YP_004204338.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
gi|320018325|gb|ADV93311.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
Length = 280
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+GHS SP ++N + K +G +G + V+ D+ + + G + T
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + ++ + V
Sbjct: 63 VPHKISIMDYLDHIDESAKLLGAVNTV-RREGD-KLVGYNTDGEGFVKSL-------MKV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
S L+ F++IGAGGA +A+ + + I NRT ++A+ L E
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRNTPKKFDICNRTLEKAKRLTEATPSFHNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA + G + G+ MF+ QA ++ +TG
Sbjct: 230 KEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
>gi|417659556|ref|ZP_12309156.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|417908509|ref|ZP_12552266.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|418605463|ref|ZP_13168787.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|420183257|ref|ZP_14689390.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|420194893|ref|ZP_14700690.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|420214055|ref|ZP_14719335.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|420216205|ref|ZP_14721421.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|420220541|ref|ZP_14725500.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|420221619|ref|ZP_14726546.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|420225792|ref|ZP_14730619.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|420229699|ref|ZP_14734404.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|420232110|ref|ZP_14736752.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|420234757|ref|ZP_14739317.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
gi|329735193|gb|EGG71485.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|341655870|gb|EGS79593.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|374402352|gb|EHQ73382.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|394249720|gb|EJD94933.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|394263953|gb|EJE08674.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|394283977|gb|EJE28138.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|394285894|gb|EJE29960.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|394290245|gb|EJE34109.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|394292295|gb|EJE36054.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|394293226|gb|EJE36949.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|394298993|gb|EJE42548.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|394301832|gb|EJE45286.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|394304000|gb|EJE47410.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
Length = 269
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|427736701|ref|YP_007056245.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
gi|427371742|gb|AFY55698.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
Length = 290
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 142/270 (52%), Gaps = 28/270 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFS 309
+TK+ G+IG PV HS SP+++N A + + + V++ ++ ++A +++ GF+
Sbjct: 5 NTKLLGVIGHPVEHSLSPLMHNAALEKLRLDYVYLPFPIEPQNLATALDGFAAIGVVGFN 64
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK+A V ++ +A+++GAVN ++R+ D K G NTD G I+ ++ L
Sbjct: 65 ATIPHKQAIVPKLSNIEPIARAVGAVNTVVRK--DDKWIGTNTDVEGFIAPLQS-----L 117
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA 428
+ ++AL V+G GGA +A+ G G A V + R + E ++
Sbjct: 118 DRDWSQTNAL------VLGNGGAARAVVAGCTQLGCASVRVVGRNLQKLEEFRDSWQDSP 171
Query: 429 LSLADLE------NFNPE---DGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDA 476
LS + + PE + +L NTT IGM PK+D +PI H +V+D
Sbjct: 172 LSPLKVNVQVHEWGYIPEIIKEANLLINTTPIGMYPKIDNSPINADLFLHLPKDTIVYDL 231
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQ 506
+YTP T+ L+ A+++ T + GLEM + Q
Sbjct: 232 IYTPSPTKFLQYAQQADKTAIDGLEMLVQQ 261
>gi|418562513|ref|ZP_13126970.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21262]
gi|371973617|gb|EHO90965.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21262]
Length = 268
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDNYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|386831205|ref|YP_006237859.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|417799923|ref|ZP_12447055.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21310]
gi|418655639|ref|ZP_13217488.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-105]
gi|334272455|gb|EGL90820.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21310]
gi|375036132|gb|EHS29213.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-105]
gi|385196597|emb|CCG16226.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 268
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +S+A
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISIA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|238054389|sp|P07547.3|ARO1_EMENI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
Length = 1583
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 231/514 (44%), Gaps = 64/514 (12%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+D VE+R+D LK+ +I + L +P +FT R +GG++ D
Sbjct: 1074 GSDAVELRVDLLKDPASNNDIPSVDYVVEQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAH 1133
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK--CKVIVSSHNYQYTPSVEDL 155
+ +++ RLA G +++D+E+ D +R K K+I S H+ + S ++
Sbjct: 1134 DAALELYRLAFRSGCEFVDLEIAFP---EDMLRAVTEMKGFSKIIASHHDPKGELSWANM 1190
Query: 156 SNLVARIQA-SGADIVKFATTALDITD--VARVFQ--ITVHSQVPIIGLVMGERGLISRI 210
S + +A DI+K A +I D R F+ VP+I + MG++G +SRI
Sbjct: 1191 SWIKFYNKALEYGDIIKLVGVARNIDDNTALRKFKNWAAEAHDVPLIAINMGDQGQLSRI 1250
Query: 211 LCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKS 268
L GF+T + + +APGQ + ++ L ++ P K F I G P+ S+S
Sbjct: 1251 L----NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKP--KKFAIFGSPISQSRS 1304
Query: 269 PILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
P L+N F VG + L + + S DF G S TIP K + DEV
Sbjct: 1305 PALHNTLFAQVGLPHNYTRLETTNAQDVQEFIRSPDFGGASVTIPLKLDIMPLLDEVAAE 1364
Query: 329 AKSIGAVNCIIR----RQSDGKLFGYNTDYVGAISAIED-GLRGRLNVSGGVSSALAGKL 383
A+ IGAVN II + + +L G NTD+ G I ++ G+ G S+
Sbjct: 1365 AEIIGAVNTIIPVSTGKNTPSRLVGRNTDWQGMILSLRKAGVYGPKRKDQEQSA------ 1418
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+V+G GG +A Y G + + I RT + + T + ++ +E+ + +
Sbjct: 1419 -LVVGGGGTARAAIYALHNMGYSPIYIVGRTPSKLENMVSTFPS-SYNIRIVESPSSFES 1476
Query: 443 MILANTTSIGMQPKVDETPIPKHALGHY-------------------ALVFDAVYTPKIT 483
+ +I +D P + L H ++ + Y P++T
Sbjct: 1477 VPHVAIGTIPADQPID--PTMRETLCHMFERAQEADAEAVKAIEHAPRILLEMAYKPQVT 1534
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L+R A +SG + GLE+ +GQ + Q++ +TG+
Sbjct: 1535 ALMRLASDSGWKTIPGLEVLVGQGWYQFKYWTGI 1568
>gi|380693973|ref|ZP_09858832.1| shikimate 5-dehydrogenase [Bacteroides faecis MAJ27]
Length = 248
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 26/262 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F+S G N +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFRSEGINAEYVNFEIPNINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + +E+D IGAVN I I RQ GK L GYN+D +G +I+ L+ +
Sbjct: 64 KEQVIPFLNELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQPQ--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G V +RT+ L+
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESVFVSRTHKT---------DDMLTY 162
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAE 490
+L E+ ++ N T +GM PKVD P IP L L++D +Y P +T +++ E
Sbjct: 163 EELTPEIMEEHTVIVNCTPVGMYPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMKKGE 222
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
GA +GLEM + QA+ +E
Sbjct: 223 AQGAVTKNGLEMLLLQAFAAWE 244
>gi|291548176|emb|CBL21284.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 288
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T + G++G PV HS SP+++NEAF+ +G + V++ V + + + + + GF+
Sbjct: 8 TGLTGLLGSPVAHSVSPLMHNEAFRYLGLDYVYLCFDVTEETLPQAVEGLKACGIKGFNL 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K V+ DE+ A+ IGAVN + R +GKL G+NTD G + D
Sbjct: 68 TMPNKNKIVELLDELSPTAQLIGAVNTV--RNDNGKLKGFNTDGYGFTQSARDA------ 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-----IANRTYDRARELAETVG 425
+ G+ V+G GGAG A+ + +GA+ + +R ++RA +AE +
Sbjct: 120 -----GCDVKGRTITVMGVGGAGMAICGQSALEGAKKIHVFARPTSRYWERAAAMAEKMS 174
Query: 426 GHA---LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
+ L ++++ E+ +L N TS+GM P V T I AL H L V D
Sbjct: 175 HMTECEMILHEMDDHTALKDALEESNLLINATSVGMVPDVTGTVISDKALFHPELTVADV 234
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY P+ TRLLREA E+G +G+ M + Q + + +TGL
Sbjct: 235 VYEPRETRLLREAREAGCPTFNGMYMLLHQGVKAFHIWTGL 275
>gi|242242874|ref|ZP_04797319.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|418615660|ref|ZP_13178599.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|418633499|ref|ZP_13195912.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|420174638|ref|ZP_14681087.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|420190210|ref|ZP_14696154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|420192347|ref|ZP_14698207.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|420204514|ref|ZP_14710072.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
gi|242233649|gb|EES35961.1| shikimate dehydrogenease [Staphylococcus epidermidis W23144]
gi|374816710|gb|EHR80909.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU118]
gi|374839252|gb|EHS02770.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU129]
gi|394244869|gb|EJD90201.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM061]
gi|394259101|gb|EJE03971.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM037]
gi|394261558|gb|EJE06355.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM023]
gi|394273524|gb|EJE17955.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM015]
Length = 269
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQLQDIKKIISEKGIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLIK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + IANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMYGNKDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|414076194|ref|YP_006995512.1| shikimate dehydrogenase [Anabaena sp. 90]
gi|413969610|gb|AFW93699.1| shikimate dehydrogenase [Anabaena sp. 90]
Length = 288
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HS SP+++N A +G + V++ V +++ + ++S GFS
Sbjct: 6 TQLLGVIGHPVSHSLSPLMHNAALAKLGLDYVYLPFPVAPENLERAIAGFASIGVVGFSI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ +A++IGAVN + RQ D G NTD G I+ ++
Sbjct: 66 TIPHKQAILPLLSEISPIAQAIGAVNT-VTRQGD-NWVGTNTDVAGFIAPLQTTYH---- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ K V++G GGA +A+ G G A + + R + + ++
Sbjct: 120 ------QDWSQKKAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLQAFTQSWQNSPF 173
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+ +L N +L NTT +GM P VDE+P+ +G+ A+V+D +Y
Sbjct: 174 ADKFQVHEWQELPNLL-HQANLLVNTTPMGMYPHVDESPLSSQEMGYLPGDAIVYDLIYI 232
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
PK T+ L AE+ GA ++ GLEM + Q
Sbjct: 233 PKPTKFLHLAEKQGAIMIDGLEMLVQQ 259
>gi|220931440|ref|YP_002508348.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
gi|254806746|sp|B8D2C6.1|AROE_HALOH RecName: Full=Shikimate dehydrogenase
gi|219992750|gb|ACL69353.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
Length = 289
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 150/278 (53%), Gaps = 26/278 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+V G++G P+GHS SP ++N A+K +G N V++ L + D + + + + +F G +
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP+KE + DE+D +A IGAVN I+ + GKL GYNTD +G +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIV--NNGGKLKGYNTDALGFKKMLED------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELA----ETVG 425
S + G V+IGAGGA +A+ A A+ + + + NRT +A +L +T
Sbjct: 117 ---DCSFEIKGTKAVIIGAGGASRAVGAVLAREGASEIFLLNRTLKKAAKLVGIWNKTYP 173
Query: 426 G---HALSLADLENFNP--EDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYT 479
G AL L D + + P + ++ +TT +GM P + P I K A+ LV D VY
Sbjct: 174 GIKTVALPL-DEDKYLPVVKRCDVIIDTTPVGMAPGIKGGPVIAKEAITRDTLVVDLVYN 232
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P T L++ + GA ++G M I QA ++ +TG+
Sbjct: 233 PPETTLIKAGRQVGARTMNGFPMLIYQAAYAFKLWTGI 270
>gi|168204596|ref|ZP_02630601.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
gi|170663804|gb|EDT16487.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
Length = 271
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE N E +I NTT GM P ++ + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEINEEFALI--NTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
+G V GL M +GQ + E + G+
Sbjct: 227 NNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|224024792|ref|ZP_03643158.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
gi|224018019|gb|EEF76026.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
Length = 249
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 25/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K FG+IG P+GHS S +NE F S + +V+ + I F + ++N + AG + TI
Sbjct: 2 KKFGLIGFPLGHSFSKNFFNEKFHSENIDAEYVNFEIPTIEDFPKVLAANPNLAGLNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG--KLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + DE+D A++IGAVN I Q+ G KL GYN+D +G +IE L
Sbjct: 62 PYKEKVIPYLDELDKDAEAIGAVNVIKLVQTKGKRKLIGYNSDLLGFTQSIEPLLEP--- 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+ +G + G + +R+ R A TV L+
Sbjct: 119 ---------FHKKALILGTGGASKAINHGLQQLGLETLFVSRS----RHDANTVTYEELT 165
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
+ + ++ N T +GM P+ D+ P IP L L++D +Y P T +++
Sbjct: 166 PEIMAEYK-----VIVNCTPVGMYPQADKCPEIPYECLTPQHLLYDLLYNPDTTLFMKKG 220
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
+ GA + +GLEM + QA+ ++
Sbjct: 221 SDQGAVVKNGLEMLLLQAFGSWD 243
>gi|388545085|ref|ZP_10148369.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
gi|388276725|gb|EIK96303.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
Length = 271
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 22/260 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
I+G P S S ++N A+ ++G + FV V+D + G + ++P+K+A
Sbjct: 12 IMGSPF--SLSAKIHNAAYAALGLDYTFVCFGVEDPVAAVTAIRTLGVRGMNVSMPYKQA 69
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
+ D +D A+ IGAVN I DG L GYNTDY+GA+ A+++ R
Sbjct: 70 VMPHLDAIDESAQVIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTR----------- 116
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
L GK ++GAGGA +A+ YG GA+V + NR+ +R ELA+++G A +E+F
Sbjct: 117 -LNGKRVAIVGAGGAARAVVYGCTQAGAQVTVFNRSAERGSELAQSLG--AQWGGAVEHF 173
Query: 438 NPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI 496
+ + I+ N TS+G QP D P+ H +V D + P T LLR+A G
Sbjct: 174 HAKAFDIVINATSVGFKQP--DSNPLDGRLQSHL-IVMDVAFMPVQTALLRQARTLGCGT 230
Query: 497 VSGLEMFIGQAYEQYERFTG 516
V+G M + QA Q E +TG
Sbjct: 231 VAGTRMLVHQACRQIELYTG 250
>gi|188580745|ref|YP_001924190.1| shikimate 5-dehydrogenase [Methylobacterium populi BJ001]
gi|179344243|gb|ACB79655.1| shikimate 5-dehydrogenase [Methylobacterium populi BJ001]
Length = 278
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 25/269 (9%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
++G P+ HS+SP+++ G G + L V DD A FF+ ++ FAG + TIPHK
Sbjct: 7 VVGHPIRHSRSPLIHGHWLAEHGLAGTYERLDVAPDDFAAFFRALPASGFAGGNVTIPHK 66
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL-RGRLNVSGG 374
EAA + D + AK IGAVN +I G++ G NTD G I+ ++ L G +GG
Sbjct: 67 EAAFRLADSLTERAKKIGAVNTLI--VEGGRVRGDNTDAPGFIAHLDRSLGEGWPERTGG 124
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLA 432
+ +V+GAGGA +A+ G +G RV +ANR+ +RAR LAE GH AL+
Sbjct: 125 TA--------LVLGAGGAARAIVVGLVERGMRVRVANRSPERARALAELDPGHVEALAWE 176
Query: 433 DLENFNPEDGMILANTTSIGM--QPK--VDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
+ E G+ L NTTS+GM P +D P+P+ A V D VY P T LL
Sbjct: 177 AVPAALSETGL-LVNTTSLGMAGHPPLALDLAPLPER-----AAVADIVYVPLETPLLAA 230
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
A G V GL M + QA + + GL
Sbjct: 231 ARARGLAAVDGLGMLLHQAVPGFFAWFGL 259
>gi|403379143|ref|ZP_10921200.1| shikimate 5-dehydrogenase [Paenibacillus sp. JC66]
Length = 292
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 145/278 (52%), Gaps = 20/278 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T ++G+ G P+ HSKSP++ N AF G N + H+ + + F G +
Sbjct: 14 TVMYGVFGDPIAHSKSPLMLNRAFAEKGLNAAYAAFHIKPGTLRDAVNGIRALGFRGVNV 73
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK + D VD A +IGAVN I+ R DGKL GYNTD +G + ++++
Sbjct: 74 TIPHKLEVMDYLDHVDEHALAIGAVNTIVNR--DGKLTGYNTDGIGYVRSLKEE------ 125
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--- 426
A GK V++GAGGA K + Y +G + ++IANRT D+A +LA+ +
Sbjct: 126 ----AHFAPKGKTVVLVGAGGAAKGIGYALIQEGVKKLIIANRTPDKAYDLAKDLQAWTE 181
Query: 427 -HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+ L ++ ++ ED ++ +TT +GM P + + P + + LV D VY P TRL
Sbjct: 182 TEGIPLTEIGSY-LEDSELVVHTTRVGMHPHIHDIPFSPQHIHNQLLVSDIVYNPLDTRL 240
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
L EA GA GL MF+ Q +E +TGL + A
Sbjct: 241 LSEARLRGAKTHGGLGMFVYQGAYAFEYWTGLAAPVEA 278
>gi|417905458|ref|ZP_12549269.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21269]
gi|341843734|gb|EGS84956.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21269]
Length = 268
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SL
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLE 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +I+ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIII-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|99082700|ref|YP_614854.1| shikimate 5-dehydrogenase [Ruegeria sp. TM1040]
gi|123252059|sp|Q1GCM4.1|AROE_SILST RecName: Full=Shikimate dehydrogenase
gi|99038980|gb|ABF65592.1| shikimate dehydrogenase [Ruegeria sp. TM1040]
Length = 276
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 144/271 (53%), Gaps = 15/271 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP L+ K+ G +G ++ H+ +D+ + F G + TIPH
Sbjct: 10 GVIGCPIAHSKSPQLHRHWLKTYGVDGHYMPMHVEPEDLESVVRMMPRMGFVGANVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K++ ++ D+V AK +GA N +I + DG + NTD G I+ + +G SG
Sbjct: 70 KQSIMEIADKVTDRAKLMGAANTLIFHE-DGAIVADNTDGYGFITNLHEGAPDWDAKSGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
+ V GAGGA +A +A +A + + NRT RA+E+A+T G ++
Sbjct: 129 AT---------VFGAGGASRAVIASLIEAGVPEIRLTNRTRSRAKEVAQTFGSKVTAVDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+E N ED ++ NTTS+GM + +P L +V D VY P T LL+ AEE+
Sbjct: 180 VEAGNVIEDASLVVNTTSLGMTGQ-RRLRVPLDGLHSGIVVTDLVYNPLKTELLQAAEEA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G T+V GL M + QA +ER+ G ++N+
Sbjct: 239 GCTVVDGLGMLLHQAVPGFERWFGQRPEVNS 269
>gi|57234701|ref|YP_181209.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
gi|123618900|sp|Q3Z990.1|AROE_DEHE1 RecName: Full=Shikimate dehydrogenase
gi|57225149|gb|AAW40206.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 286
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 143/277 (51%), Gaps = 29/277 (10%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGF 308
PD +FG+IG PV HS SP + N AFK + +++ + +++ + + G
Sbjct: 5 PDA-LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGL 63
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
+ TIPHK +K D +D A+ IGAVN I+ +G+L GYNTD+ G + +E R
Sbjct: 64 NVTIPHKIEVIKYIDSLDPAAEKIGAVNTIV--NENGRLKGYNTDFGGFVRLLE---HNR 118
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
+ A A + F ++GAGG+ A+A G + + R ++A++LA G
Sbjct: 119 I--------APAKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLA---GKMC 167
Query: 429 LSLA------DLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
L L+ +L + N E+ + ++ N T +GM ++ +P L V DA+Y
Sbjct: 168 LRLSGKTQGLELNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIY 227
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
P TRLL +AE+ GA I++GLEM + Q +E +T
Sbjct: 228 NPCKTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWT 264
>gi|384550423|ref|YP_005739675.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302333272|gb|ADL23465.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 268
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D +Y P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIIYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|237756605|ref|ZP_04585122.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691236|gb|EEP60327.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 279
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 31/283 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T V+G+ G PV HSKSP F+ +G N V+V V +DI K ++ D G +
Sbjct: 6 NTLVYGLFGYPVKHSKSPTFQTAVFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIKGVN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHKE + +E+ K I AVN I + DG L GYNTD+ G I +++
Sbjct: 66 VTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDWYGFIEGLKE------ 117
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-- 426
+ +AGK +VIGAGG+ +A+ YG +G ++ +ANRT RA L E
Sbjct: 118 -----IMPDIAGKRVLVIGAGGSSRAIIYGLLNQGVGKIYLANRTIKRAENLIEDFSNFY 172
Query: 427 -------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA-LVFDAVY 478
+SL ++ E +I+ NTTS+G+ D+ I + L + + V D +Y
Sbjct: 173 RIVKMIIKPISLDEINRILNEVELIV-NTTSVGLNE--DDPEIFDYNLINSSHTVVDIIY 229
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKM 521
T+LL++A+E A +G M I Q + +E +TG P +
Sbjct: 230 EE--TKLLQKAKEKNANYQNGYPMLIYQGAKSFEIWTGKPAPI 270
>gi|396496869|ref|XP_003844839.1| similar to pentafunctional polypeptide AROM [Leptosphaeria maculans
JN3]
gi|312221420|emb|CBY01360.1| similar to pentafunctional polypeptide AROM [Leptosphaeria maculans
JN3]
Length = 1591
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 142/522 (27%), Positives = 231/522 (44%), Gaps = 82/522 (15%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQYDGDEN 98
GAD VE+R+D L + N +E + T L + P +FT R +GG++
Sbjct: 1083 GADAVELRVDLLVDPNGQEGLPTPEYVIEQLTILRTVTTTPIIFTIRTKAQGGKFPDTAY 1142
Query: 99 ERVDVLRL-AMELGADYIDVELQVA----REFNDSIRGKKPEKCKVIVSSHNYQYTPSVE 153
+ L L A+ LG +++D+E+ ++ RE ++ RG ++I S H+ + +
Sbjct: 1143 DEARALYLTALRLGCEFVDLEMTMSEDILREVSEG-RGY----TEIIASHHDPKSELNWS 1197
Query: 154 DLSNLVARIQA-SGADIVKFATTALDITD-----VARVFQITVHSQVPIIGLVMGERGLI 207
+ S + +A ++K A I D + + T H VP+I + MGE G +
Sbjct: 1198 NGSWMKYYNRALQYGTVIKLVGVAQSIKDNFALAEFKSWADTAHP-VPLIAINMGEHGKL 1256
Query: 208 SRILCAKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPV 263
SRIL GFLT + + ++ +APGQ + D+ MG TK F I G PV
Sbjct: 1257 SRIL----NGFLT--PVSHPLLPSATAPGQLSAADIR--LGLSLMGEIPTKKFFIFGSPV 1308
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP L+N F+ G V+ D + + DF G S TIP K+ D
Sbjct: 1309 SQSPSPRLHNRLFRETGLPHVYSRFETTDASSVRDIIRAPDFGGASVTIPLKQDVRTLLD 1368
Query: 324 EVDTVAKSIGAVNCIIRR--------QSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
V ++IGA+N I+ Q +L G NTDY+G I +++ G L+ SG
Sbjct: 1369 GVGPEVEAIGALNTIVPETSIDETTGQEVTRLIGLNTDYLGMILVLKNA--GALSQSG-- 1424
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH------- 427
SAL VIG GG + Y + G A + + R + L +
Sbjct: 1425 -SAL------VIGGGGTSRGAIYALREMGYAPIYLLGRNLSKITALKDDFPAEYNVQIIS 1477
Query: 428 ------------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
A+++ + P D I ++ + K E + + ++ +
Sbjct: 1478 SPEQVESLESMPAVAIGTIPADQPIDPAIRETLCALFAKAKKGEADVGSNG----RILLE 1533
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A+++G T V+GLE+ +GQ Q+E +TG+
Sbjct: 1534 MAYKPPVTALIQLAQDAGWTTVNGLEVLVGQGVHQFEYWTGI 1575
>gi|257898584|ref|ZP_05678237.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
gi|257836496|gb|EEV61570.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
Length = 284
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA+ ++ N+T+ + +E E +
Sbjct: 118 ---GIS--VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F D + +L N T IGM K+D++P+ ++ H L VFD +
Sbjct: 173 RTSCEIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|422419863|ref|ZP_16496818.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|422422950|ref|ZP_16499903.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313632237|gb|EFR99299.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313636739|gb|EFS02399.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 289
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 139/280 (49%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T++ +IG PV HSKSPI+YN +F+ G + ++ + V +A + + G +
Sbjct: 9 TRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNLRGSNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K +K D++ A+ IGAVN II DGKL G+ TD +G S + D
Sbjct: 69 TMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDGLGFASNLRDS------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
GV+ +AGK +IGAGGA A+ + GA+ + I + Y +A++ ++
Sbjct: 121 ---GVT--VAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQTVASIKQ 175
Query: 427 HA-------LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
L D E E IL N T +GM P +TP+ + H L+ D
Sbjct: 176 EVPNCIVQIYDLNDTEKLYAEIATSDILVNATLVGMHPYESKTPVKDATIFHKNLIVADV 235
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY PK T+L+ +AE +G V GL M + Q E Y+ FTG
Sbjct: 236 VYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTG 275
>gi|404482073|ref|ZP_11017301.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344769|gb|EJZ71125.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 289
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 24/294 (8%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-DDIAKFFQTYSSNDFAG 307
+ DTKV+GIIG PV HS SPIL N K + + + V ++I + + + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
F+ TIP+K+ + ++D AK IGA+N +I+ ++ K GYNTD +G ++ +
Sbjct: 62 FNVTIPYKKDMLDIVSDIDDRAKKIGAINTLIKTENGYK--GYNTDIIGLGMSLYNN--- 116
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG 426
S ++ GK +++GAGGA KA+ Y A +G + + + NR +A+EL VG
Sbjct: 117 --------SLSIKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELKAEVGI 168
Query: 427 HALSLADLE------NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV-FDAVYT 479
+S+ L+ N +D + TT++GM P V++ I + A D +YT
Sbjct: 169 KDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLIYT 228
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLL 533
P T +++ + G ++GL+M I Q +E + + K+ + K VLL
Sbjct: 229 PFETSFIKKMKSKGKICINGLDMLILQGVASFEIWNNI--KVKKDTIEKVKVLL 280
>gi|300867823|ref|ZP_07112465.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300334154|emb|CBN57639.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 292
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG P+ HS SP+++N A +G + V++ V +D+ +++ GFS
Sbjct: 6 TKLLGVIGHPIEHSLSPVMHNAALSHLGLDIVYLAFPVKPEDLNVAISGFAAVGLLGFSI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+ + EV VA ++GAVN + R + G NTD G ++ + L+
Sbjct: 66 TIPHKQGILPLLSEVSPVAIAVGAVNTVYRTANGWG--GTNTDVRGFLAPLRS-----LS 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ G + K+ V++G+GGA +A+ G G A + + R+ + E ++ L
Sbjct: 119 LKTGTKQDWSQKVAVILGSGGAARAVVAGCAELGCAEIHVVGRSEQKLTEFQQSWVNSPL 178
Query: 430 SLADLENFNPEDGMI------LANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYTP 480
++ L + E M+ L N T IGM P+ DE+P+ A L A+ +D +YTP
Sbjct: 179 AVNLLTHTWEELPMLISKADLLVNATPIGMYPRGDESPVALSAIERLSEGAIAYDLIYTP 238
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
T L++A+E GA + GLEM + Q E + P
Sbjct: 239 NPTLFLKQAQERGAIAIDGLEMLVQQGAAALEIWLQQP 276
>gi|373868603|ref|ZP_09605001.1| Shikimate 5-dehydrogenase I alpha [Sulfurimonas gotlandica GD1]
gi|372470704|gb|EHP30908.1| Shikimate 5-dehydrogenase I alpha [Sulfurimonas gotlandica GD1]
Length = 263
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 138/265 (52%), Gaps = 27/265 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
K+F I G PV HS+SP+++N FK++ + + + + D +K +T+ S +G + T+P
Sbjct: 2 KLFAIFGDPVSHSRSPLMHNCVFKNLNYKACYTRVHLKDGSKLKETFFSLGLSGANVTVP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE A K CDEV AK++G VN ++ +G+L GYNTD G + AIE+ G
Sbjct: 62 HKEEAYKACDEVRGFAKTVGVVNTLV--NENGRLIGYNTDADGFMYAIEE--------FG 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
V++ L ++GAGG KALA G +V + NR+ R E +G +
Sbjct: 112 KVNNVL------ILGAGGTAKALASRFMQDGIKVSVLNRSEGRLAYFKE-IGCETF---N 161
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKH----ALGHYALVFDAVYTPKITRLLREA 489
+ + ++ NTTS G+ K +E P PK L + + V DA+Y K+T L+ A
Sbjct: 162 WDTYKTAKYDLVINTTSAGL--KDEELPAPKEIINDVLANTSFVADAIY-GKLTPFLKLA 218
Query: 490 EESGATIVSGLEMFIGQAYEQYERF 514
+E T G +M +GQ E F
Sbjct: 219 QEKNITFKDGADMLLGQGVLANELF 243
>gi|320334938|ref|YP_004171649.1| shikimate dehydrogenase [Deinococcus maricopensis DSM 21211]
gi|319756227|gb|ADV67984.1| Shikimate dehydrogenase [Deinococcus maricopensis DSM 21211]
Length = 279
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 144/276 (52%), Gaps = 22/276 (7%)
Query: 244 YNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYS 301
Y R++ + F + P HS SP ++ AF+ G + + V + D+
Sbjct: 8 YTPRRLKRVKRAF-LYADPAAHSLSPRMHAAAFRFAGLDATYDAVRVPAADLPGAIAALR 66
Query: 302 SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI 361
+ D G + ++PHK AA+ D + A++IGAVN +I +DG L G NTD G ++A+
Sbjct: 67 APDVLGANLSLPHKAAALPHLDALTPAARAIGAVNTVI--HADGTLTGDNTDAPGLLAAL 124
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421
D + A AG + VV+GAGGA +A + +A+G V+I NRT D AR LA
Sbjct: 125 RD------------AHAPAGGVSVVLGAGGAARAAVWALRAEGRDVLILNRTLDNARALA 172
Query: 422 ETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTP 480
+GG A++ D+ D ++ N +S G+ D TP+P AL ALV+D VY P
Sbjct: 173 RDLGGTAVTREDVPWL---DITLIVNASSAGLG-DPDATPLPDPPALARGALVYDMVYKP 228
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ TRL+R+A GA +GL M QA + +TG
Sbjct: 229 RDTRLMRDARARGARTANGLGMLAHQARLAFTAWTG 264
>gi|134045782|ref|YP_001097268.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C5]
gi|132663407|gb|ABO35053.1| shikimate dehydrogenase [Methanococcus maripaludis C5]
Length = 280
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 152/278 (54%), Gaps = 35/278 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDI--------AKFFQTYSSND 304
TK+ G+IG PV HS SPI++N A + +G N ++ V + AK FQ
Sbjct: 7 TKLLGLIGHPVDHSFSPIMHNAAIEDLGINYRYLAFDVSEENLKDVVAGAKAFQ------ 60
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
AGF+ TIPHK +K DE+D AK+IGAVN + + +GK GYNTD +GA A+E+
Sbjct: 61 IAGFNITIPHKMNIMKYLDEIDDDAKAIGAVNTV--KIENGKAIGYNTDGIGAKKALEEK 118
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
+ L K ++IG+GG +A++Y AK ++ I NR ++A+ L+E +
Sbjct: 119 -----------TGILINKNILIIGSGGGSRAVSYEL-AKENKLTIINRNIEKAKILSEEL 166
Query: 425 GG-----HALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVY 478
++++ DL N + +D I+ NTT +GM P ++ P IP + + + A+V D +Y
Sbjct: 167 SKNLKKQNSITYGDL-NVDIKDFDIIINTTPVGMYPNMNVKPVIPLNDIKYGAVVMDLIY 225
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P L+EA + GA ++G+ M + Q +E + G
Sbjct: 226 NPLEPVFLKEAIKYGAETINGIGMLVYQGAVSFEIWAG 263
>gi|347548873|ref|YP_004855201.1| putative shikimate 5-dehydrogenase AroD [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981944|emb|CBW85929.1| Putative shikimate 5-dehydrogenase (AroD) [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 273
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 22/269 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS----NDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G + + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYNSVLIEEDA--FETEIKKLMVSGIRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A GAVN ++R++ GK +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELEPLAADSGAVNTVLRKE--GKWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGH-ALSL 431
+ S ++ GAGGA KA+ K A++ IANRT ++A E+ + H A++L
Sbjct: 112 -IRSITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHDNHYAMTL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E N + I+ TTSIG++ +++PI L + D +Y P T L+EA++
Sbjct: 171 EEAEK-NLANFTIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPGK 520
+GA I +GL MF+ Q +E +TG+ K
Sbjct: 230 NGAIIQNGLSMFVNQGALAFEIWTGVKPK 258
>gi|258515925|ref|YP_003192147.1| shikimate 5-dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
gi|257779630|gb|ACV63524.1| shikimate 5-dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
Length = 288
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 29/279 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TK+ GIIG P+ HS SP ++N AF ++G + +V H+ D+++ + + + G +
Sbjct: 10 TKICGIIGDPIEHSFSPFMHNAAFAALGLDYAYVPFHVKRDNLSDALKAVRALNIKGINV 69
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHK+A ++ DE+ + A IGAVN ++ G L GYNTD G + ++++
Sbjct: 70 TVPHKQAVLQYLDEISSSASLIGAVNTVVNNH--GYLVGYNTDAPGFVRSLKE------- 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-- 428
G S AG +F++ G A A + + + IANRT DRA E+A + G+
Sbjct: 121 -QAGFSPEGAG-IFILGAGGAARAVAVELALSGASLIHIANRTVDRAEEIAGLIEGNTSC 178
Query: 429 ---------LSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVY 478
LSL+ L +D ++ TTS GM P+V E P P A LV D +Y
Sbjct: 179 SSKAYSQQDLSLSKLM----KDADLIIQTTSQGMYPRVTELPAYPLDAFHAGQLVCDLIY 234
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P+ T L+ AE+ GA ++G+ M + Q +E +TGL
Sbjct: 235 NPRQTIFLQMAEQCGAKTLNGMGMLLYQGALAFEYWTGL 273
>gi|448309820|ref|ZP_21499674.1| shikimate 5-dehydrogenase [Natronorubrum bangense JCM 10635]
gi|445589358|gb|ELY43593.1| shikimate 5-dehydrogenase [Natronorubrum bangense JCM 10635]
Length = 269
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 143/271 (52%), Gaps = 27/271 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
VFG++G PVGHS SP ++ A+ +G +V + D+ + G + T
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDQLGLEARYVTFEPEPADLEAAIDGADALGITGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ + C E D +A IGAVN I S G G+NTD VGA+ A+ D
Sbjct: 62 IPFKQDVLDCV-EADELAARIGAVNTIDFTGS-GTPTGHNTDAVGAMRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
L G VV+GAGGAG+A+A+G GA V IANRT A +LAE V GH
Sbjct: 113 ----DVTLEGADAVVVGAGGAGRAIAFGLADAGATVEIANRTEATAHDLAEAVPGATGHG 168
Query: 429 LS---LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
L LADL ED IL N TS+GM+ DETP+P AL V DAVY P TRL
Sbjct: 169 LEADMLADLL----EDAEILVNATSVGMES--DETPVPADALHGELAVMDAVYQPLETRL 222
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LR+A E GAT V G M + Q E +E +TG
Sbjct: 223 LRDAAEVGATTVDGAWMLLYQGVEAFELWTG 253
>gi|422873291|ref|ZP_16919776.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
gi|380305676|gb|EIA17953.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
Length = 271
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE N E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEINEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|334318036|ref|YP_004550655.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti AK83]
gi|334097030|gb|AEG55041.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti AK83]
Length = 286
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 138/270 (51%), Gaps = 27/270 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTY---SSNDFAGFSCTIP 313
+ G PV HS+SP+++ K G G + H + + F DF G + TIP
Sbjct: 14 VTGYPVKHSRSPLIHGHWLKQFGIRGSYRAHEVTPEAFPDFMRQIKEGRTDFCGGNVTIP 73
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA + D D ++ +GA N + +GK+ NTD G ++ +++ +G +S
Sbjct: 74 HKEAAFRLADRPDELSAELGAANTLW--LENGKIRATNTDGRGFVANLDERAKGWDRISA 131
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG--HALS 430
V ++GAGGA +A+ + +G + + + NRT +RARELA+ G HA S
Sbjct: 132 AV----------ILGAGGASRAVIQAIRDRGVKTIHVVNRTPERARELADRFGTAVHAHS 181
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLR 487
+A L G+ + NTTS+GM D P P L A+V D VY P T LLR
Sbjct: 182 MAALPEVVSGAGLFV-NTTSLGM----DGEPAPAIDFSGLAPDAVVTDVVYVPLKTPLLR 236
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+AEE G IV GL M + QA +E++ GL
Sbjct: 237 QAEEQGFRIVDGLGMLLHQAVPGFEKWFGL 266
>gi|29349623|ref|NP_813126.1| shikimate 5-dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
gi|298383884|ref|ZP_06993445.1| shikimate dehydrogenase [Bacteroides sp. 1_1_14]
gi|383120557|ref|ZP_09941285.1| shikimate 5-dehydrogenase [Bacteroides sp. 1_1_6]
gi|29341533|gb|AAO79320.1| shikimate 5-dehydrogenase [Bacteroides thetaiotaomicron VPI-5482]
gi|251840389|gb|EES68471.1| shikimate 5-dehydrogenase [Bacteroides sp. 1_1_6]
gi|298263488|gb|EFI06351.1| shikimate dehydrogenase [Bacteroides sp. 1_1_14]
Length = 248
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 26/262 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F+S G N +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFRSEGINAEYVNFEIPNINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + +E+D IGAVN I I RQ GK L GYN+D +G +I+ L+ +
Sbjct: 64 KEQVIPFLNELDRDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLQPQ--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G K G V +RT+ L+
Sbjct: 121 ---------HKKALILGTGGASKAVYHGLKNLGIESVFVSRTHKT---------DDMLTY 162
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAE 490
+L E+ ++ N T +GM PKVD P IP L L++D +Y P +T +++ E
Sbjct: 163 EELTPEIMEEYTVIVNCTPVGMYPKVDFCPNIPYELLTPNHLLYDLLYNPNVTLFMKKGE 222
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
GA +GLEM + QA+ +E
Sbjct: 223 AQGAVTKNGLEMLLLQAFAAWE 244
>gi|416125333|ref|ZP_11595931.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|420199837|ref|ZP_14705507.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
gi|319400930|gb|EFV89149.1| shikimate dehydrogenase [Staphylococcus epidermidis FRI909]
gi|394271244|gb|EJE15740.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM031]
Length = 269
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G + +GL+ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYV----NGLK---QIYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMNGNKDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|288818612|ref|YP_003432960.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384129366|ref|YP_005511979.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|288788012|dbj|BAI69759.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308752203|gb|ADO45686.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
Length = 270
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 139/272 (51%), Gaps = 32/272 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T+V+GI+G PV HS SP+ N F+ + + V+V V D + F + G +
Sbjct: 7 TEVYGIVGFPVKHSLSPVFQNAFFEYLSLDAVYVPFEVKPDSFKEAFLGLKALGVKGVNI 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P KE A + CD D +K I AVN + + ++ GYNTD++G + A+ +
Sbjct: 67 TVPFKERAFELCDLSDEPSKVIRAVNTV---KFTDRIEGYNTDWIGFLRALRE------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ L GK +V+GAGG KA+ Y +G + I NRTY+RA ELA +
Sbjct: 117 ----LEKELEGKKVLVLGAGGTAKAVVYALSREGCYIYIFNRTYERAIELARNFSAQVVK 172
Query: 431 LADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHA-LGHYALVFDAVYTPKITRL 485
PED + I+ NTTS+G+ D+ P+ + L + +VFD +Y + T L
Sbjct: 173 -------KPEDVLDDADIIINTTSVGLSD--DDPPLFDYQMLRDHHIVFDVIY--RSTPL 221
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++ A + GA +GL M I Q E + +TGL
Sbjct: 222 VKTALKKGAKAQNGLSMLIYQGMESFRIWTGL 253
>gi|116750147|ref|YP_846834.1| shikimate 5-dehydrogenase [Syntrophobacter fumaroxidans MPOB]
gi|170652887|sp|A0LLU7.1|AROE_SYNFM RecName: Full=Shikimate dehydrogenase
gi|116699211|gb|ABK18399.1| shikimate dehydrogenase [Syntrophobacter fumaroxidans MPOB]
Length = 286
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 144/267 (53%), Gaps = 15/267 (5%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T+++ +IG PV HS SP++ N AF+S+ ++ L D++ + +T + F G S T+
Sbjct: 7 TELYAVIGNPVAHSLSPVMMNAAFRSMNVPATYLALQADELPEDLETLARFGFRGLSVTL 66
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE A + D VD +A++IGAVN ++R S G NTD++GA A+
Sbjct: 67 PHKELAYRLADHVDDMARTIGAVNTLMREGS--AWIGCNTDWLGATKALRR--------- 115
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ L G+ +++GAGGA +A+A+G K +GARV IANR ++ + LA++ + LA
Sbjct: 116 ---VTELEGREALILGAGGAARAVAFGMKREGARVTIANRCVEKGKALAKSFRCDFIPLA 172
Query: 433 DLENFNPEDGM-ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
L+ + ++ TS+G+Q + + +V + VY P T L A+
Sbjct: 173 ILDRARFDRHFDVVVQCTSVGLQGTIPTVLVSDSFFEPGMVVMETVYRPLRTPFLNAAKR 232
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLP 518
+GATIV G +M + Q Q E + P
Sbjct: 233 AGATIVHGTDMLVYQGVAQLEWWLSRP 259
>gi|261418458|ref|YP_003252140.1| shikimate 5-dehydrogenase [Geobacillus sp. Y412MC61]
gi|319767581|ref|YP_004133082.1| shikimate 5-dehydrogenase [Geobacillus sp. Y412MC52]
gi|261374915|gb|ACX77658.1| shikimate 5-dehydrogenase [Geobacillus sp. Y412MC61]
gi|317112447|gb|ADU94939.1| shikimate 5-dehydrogenase [Geobacillus sp. Y412MC52]
Length = 276
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 150/269 (55%), Gaps = 19/269 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
KV+G+IG PV HS SP+++N+AF +G + V+ + + AG + T
Sbjct: 3 KVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFPVEPGQVGAAIAGVRALGIAGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN II +DG+L G+NTD G + A+E+ +N+
Sbjct: 63 IPHKLAVIPFLDEVDEHARRIGAVNTII--NNDGRLIGFNTDGPGYVQALEE----EMNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA-ETVGGHA- 428
+ L GK +VIGAGG + + + + A R+ +ANRT ++A L E G +
Sbjct: 117 T------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGEDGRSA 170
Query: 429 -LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
SLA+ E E +I+ NTTS+GM P+V+ P+ L +V D +Y P T+ L+
Sbjct: 171 YFSLAEAETRLDEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETKWLK 229
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+ GA + +G+ M + Q +E++TG
Sbjct: 230 EAKARGARVQNGVGMLVYQGALAFEKWTG 258
>gi|434403542|ref|YP_007146427.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
gi|428257797|gb|AFZ23747.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
Length = 294
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ L + ++ +++ GFS
Sbjct: 11 TKLLGVIGHPVEHSLSPVMHNVALGEMGLDYVYLPLPIAPQNLEIAIAGFAAIGVVGFSV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA++IGAVN + R+ DGK G NTD G I+ ++
Sbjct: 71 TIPHKQAILPLLSEITPVAQAIGAVNTVTRQ--DGKWVGTNTDVEGFIAPLQTTYHQDWR 128
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
K+ V++G GGA +++ G G A + + R + E + G L
Sbjct: 129 ----------QKVAVILGNGGAARSVVAGCIQLGFASIHVVGRNVQKLEEFRHSWGNSPL 178
Query: 430 -------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+L P+ + L NTT +GM P+V+ +P+ + A+ +D +Y
Sbjct: 179 KEKFQVHQWEELPQLIPQADL-LVNTTPVGMYPQVEASPLSVEEMADLPADAIAYDLIYI 237
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
PK T L++AE+ GA + GLEM + Q
Sbjct: 238 PKPTLFLQQAEKQGAIAIDGLEMLVQQ 264
>gi|418325526|ref|ZP_12936732.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU071]
gi|365228128|gb|EHM69313.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU071]
Length = 269
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQ-------IYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K ++ K + +ANRT R + + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGISNELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|212694466|ref|ZP_03302594.1| hypothetical protein BACDOR_03994 [Bacteroides dorei DSM 17855]
gi|237711195|ref|ZP_04541676.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265750787|ref|ZP_06086850.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|423228191|ref|ZP_17214597.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|423239305|ref|ZP_17220421.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
gi|423243454|ref|ZP_17224530.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|212662967|gb|EEB23541.1| putative shikimate dehydrogenase [Bacteroides dorei DSM 17855]
gi|229455039|gb|EEO60760.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263237683|gb|EEZ23133.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392636974|gb|EIY30852.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|392645207|gb|EIY38939.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|392647092|gb|EIY40798.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
Length = 246
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K +G+IG P+GHS S +NE F S + +V+ + I + +N D GF+ TI
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNC--IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + DE+D A +IGAVN I+R++ KL GYN+D +G +I+ L +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSIDPLLEPQ-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+AYG K G +R RE E + + L+
Sbjct: 120 ----------HKKALILGTGGASKAIAYGLKKLGLECKFVSRN---LRE--EMLTYNQLT 164
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++ + ++ N T +GM P+ DE P IP L L++D +Y P T +++
Sbjct: 165 PEIMDEYK-----VIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMKKG 219
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
+ GA +GLEM + QA+ ++
Sbjct: 220 ADKGAITKNGLEMLLLQAFGAWD 242
>gi|315303238|ref|ZP_07873886.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313628395|gb|EFR96880.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 273
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 143/266 (53%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G + + +L+++ A F+T ++ GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYHSVLIEEDA--FETEIKKLMASGIRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A GAVN ++R++ GK +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELEPLAVDSGAVNTVLRKE--GKWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGH-ALSL 431
+ ++ GAGGA KA+ K A++ IANRT ++A E+ + H A++L
Sbjct: 112 -IRPITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHNNHYAMTL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E N D I+ TTSIG++ +++PI L + D +Y P T L+EA++
Sbjct: 171 EEAEK-NLADFTIIIQTTSIGLEASKNKSPISLSNLKKGTVCSDIIYNPAETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA I +GL MF+ Q +E +TG+
Sbjct: 230 NGAIIQNGLSMFVNQGALAFEIWTGV 255
>gi|119511936|ref|ZP_01631034.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
gi|119463432|gb|EAW44371.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
Length = 294
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HS SP+++N A +G + +++ + +++ ++ + GFS
Sbjct: 10 TQLLGVIGHPVEHSLSPVMHNAALAQLGLDYIYLPFPIKPENLEVAIAGLAAINVVGFSV 69
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ A++IGAVN + R+ + + G NTD G I+ ++ +
Sbjct: 70 TIPHKQAIMPLLSEISPTAQAIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYQ---- 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ K+ V++G GGA +A+ G + G A++ + R + + G L
Sbjct: 124 ------QDWSQKIAVILGHGGAARAVVAGCQQLGFAQIHVVGRNMQKLTAFGNSWGSSPL 177
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYT 479
+ DL P+ + L NTT +GM P V+E+P+ L A+ +D +YT
Sbjct: 178 AEKLQVHIWDDLAKLIPQANL-LVNTTPVGMYPLVNESPVSLADMQKLSSGAIAYDLIYT 236
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
P T+ L++A++ GA ++ GLEM + Q
Sbjct: 237 PNPTQFLQQAQKHGAIVIDGLEMLVQQ 263
>gi|15963756|ref|NP_384109.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti 1021]
gi|384531162|ref|YP_005715250.1| shikimate dehydrogenase [Sinorhizobium meliloti BL225C]
gi|384537879|ref|YP_005721964.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti SM11]
gi|433611798|ref|YP_007188596.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti GR4]
gi|24211520|sp|Q92TF0.1|AROE_RHIME RecName: Full=Shikimate dehydrogenase
gi|15072931|emb|CAC41390.1| Probable shikimate 5-dehydrogenase [Sinorhizobium meliloti 1021]
gi|333813338|gb|AEG06007.1| Shikimate dehydrogenase [Sinorhizobium meliloti BL225C]
gi|336034771|gb|AEH80703.1| Shikimate 5-dehydrogenase [Sinorhizobium meliloti SM11]
gi|429549988|gb|AGA04997.1| shikimate 5-dehydrogenase [Sinorhizobium meliloti GR4]
Length = 286
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 138/270 (51%), Gaps = 27/270 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTY---SSNDFAGFSCTIP 313
+ G PV HS+SP+++ K G G + H + + F DF G + TIP
Sbjct: 14 VTGYPVKHSRSPLIHGHWLKQFGIRGSYRAHEVTPEAFPDFMRQIKEGRTDFCGGNVTIP 73
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA + D D ++ +GA N + +GK+ NTD G ++ +++ +G +S
Sbjct: 74 HKEAAFRLADRPDELSAELGAANTLW--LENGKIRATNTDGRGFVANLDERAKGWDRISA 131
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG--HALS 430
V ++GAGGA +A+ + +G + + + NRT +RARELA+ G HA S
Sbjct: 132 AV----------ILGAGGASRAVIQAIRDRGVKTIHVVNRTPERARELADRFGTAVHAHS 181
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLR 487
+A L G+ + NTTS+GM D P P L A+V D VY P T LLR
Sbjct: 182 MAALPEVVSGAGLFV-NTTSLGM----DGEPAPAIDFSGLAPDAVVTDIVYVPLKTPLLR 236
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+AEE G IV GL M + QA +E++ GL
Sbjct: 237 QAEEQGFRIVDGLGMLLHQAVPGFEKWFGL 266
>gi|186684355|ref|YP_001867551.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186466807|gb|ACC82608.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 295
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++N A ++G + V++ + +++ ++ GFS
Sbjct: 11 TKLLGVIGHPVEHSLSPAMHNAAIANLGLDYVYLPFPIAPENLEVAIAGFAVIGVVGFSV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ +A+ IGAVN + R+ + + G NTD G I+ ++ +
Sbjct: 71 TIPHKQAIMPLLSEITPLAQMIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYK---- 124
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ K+ V++G GGA +A+ G G A++ + R R +E ++ +
Sbjct: 125 ------QDWSQKVAVILGNGGAARAVVAGCHQLGFAKIHVVGRNVQRLQEFRDSWSNSPI 178
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
S +L P+ + L NTT IGM PKVDE+P+ + + A+ +D +Y
Sbjct: 179 SENLQVHQWEELSKLIPQANL-LVNTTPIGMYPKVDESPLSIEEIANLPTGAIAYDLIYI 237
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
PK T+ L A++ GA + GLEM + Q
Sbjct: 238 PKPTQFLELAQKQGAIAIDGLEMLVQQ 264
>gi|21283276|ref|NP_646364.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus MW2]
gi|49486430|ref|YP_043651.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207685|ref|ZP_06924120.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911766|ref|ZP_07129209.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
gi|417653574|ref|ZP_12303305.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21193]
gi|417797508|ref|ZP_12444704.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21305]
gi|418316547|ref|ZP_12927985.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21340]
gi|418599976|ref|ZP_13163450.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21343]
gi|418645213|ref|ZP_13207341.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-55]
gi|418934566|ref|ZP_13488388.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988662|ref|ZP_13536334.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1835]
gi|443639918|ref|ZP_21123918.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21196]
gi|448741173|ref|ZP_21723143.1| shikimate 5-dehydrogenase [Staphylococcus aureus KT/314250]
gi|448745070|ref|ZP_21726944.1| shikimate 5-dehydrogenase [Staphylococcus aureus KT/Y21]
gi|24211482|sp|Q8NWA1.1|AROE_STAAW RecName: Full=Shikimate dehydrogenase
gi|56748578|sp|Q6G8X2.1|AROE_STAAS RecName: Full=Shikimate dehydrogenase
gi|21204716|dbj|BAB95412.1| shikimate dehydrogenease [Staphylococcus aureus subsp. aureus MW2]
gi|49244873|emb|CAG43334.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887702|gb|EFH26600.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886012|gb|EFK81214.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
gi|329733265|gb|EGG69602.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21193]
gi|334267000|gb|EGL85470.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21305]
gi|365241231|gb|EHM81986.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21340]
gi|374395565|gb|EHQ66828.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21343]
gi|375024046|gb|EHS17491.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-55]
gi|377717755|gb|EHT41930.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377770660|gb|EHT94421.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
CIGC128]
gi|443406193|gb|ELS64777.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21196]
gi|445548087|gb|ELY16343.1| shikimate 5-dehydrogenase [Staphylococcus aureus KT/314250]
gi|445561609|gb|ELY17802.1| shikimate 5-dehydrogenase [Staphylococcus aureus KT/Y21]
Length = 268
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD A + GAVN ++ + D K GYNTD +G + +
Sbjct: 63 HKERIIPYLDHVDEQAINAGAVNTVLIK--DDKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|340514021|gb|EGR44292.1| pentafunctional aromatic polypeptide [Trichoderma reesei QM6a]
Length = 1575
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 237/520 (45%), Gaps = 62/520 (11%)
Query: 37 KMVVDMGKANASGADLVEIRLDGLKNFNPRENIK--TLIKE-SPVPTLFTYRPIWEGGQY 93
K VD+ + D VE+R+D LK+ P+ +K +L++ + P +FT R +GG++
Sbjct: 1064 KDAVDILPRVTADCDAVELRVDLLKDQQPQAVMKQVSLLRHVTGKPIIFTVRSESQGGKF 1123
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSV 152
DG+ R+ + RLA+ +G +Y+D+E+ ++ E +R + +I S H+ S
Sbjct: 1124 PDGNNELRLALYRLALRMGVEYLDLEVTLSDEVLQQVRESRGHTV-IITSHHDPAGALSW 1182
Query: 153 EDLSNLVARIQA-SGADIVKFATTALDITD---VARVFQITVHSQ-VPIIGLVMGERGLI 207
++ S + A +A D++K TA I D + R + +Q PII L MG G +
Sbjct: 1183 KNASWISAYNRALQYGDVIKLVGTARSIEDNFDLIRFKSRMLAAQPTPIIALNMGSAGKL 1242
Query: 208 SRILCAKFGGFLT-FGTLENGIVSAPGQ---PTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
SR+L GFLT +APGQ I+ L L ++ P K F + GKP+
Sbjct: 1243 SRVL----NGFLTPVSHPALPFKAAPGQLSAAEIRQALSLLG--EIEP--KSFYLFGKPI 1294
Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S+SP L+N F VG + L D + + S DF G S TIP K+ + D
Sbjct: 1295 SKSRSPALHNTLFGQVGLPHEYKRLETDKVEDVVEVLRSADFGGASVTIPLKQDIMAHLD 1354
Query: 324 EVDTVAKSIGAVNCIIRRQSDG-----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
++ K IGAVN +I + +L G NTD+ G + + S GV +
Sbjct: 1355 DLTEAVKIIGAVNTVIPTADESLGGRQRLTGDNTDWKGMVHVLR---------SAGVKAQ 1405
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH---------- 427
VV+GAGG +A + + G + + + R +A+ LA +
Sbjct: 1406 SGDASAVVVGAGGTSRAAIFALHSLGFKPIYVVARDASKAQGLASSFPAEYGVQVVASAA 1465
Query: 428 ---------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+S++ + P D + ++ + + GH ++ + Y
Sbjct: 1466 EAEAIASKPIVSISTVPADKPIDAAVEEILGAVFKAAAASD-----NVQGHSRVLLEMAY 1520
Query: 479 TPKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
P T +++ AE++G ++GLE+ Q + Q+E +TG+
Sbjct: 1521 HPPRTPVIQIAEKAGDWKTITGLEVLAAQGWYQFETWTGI 1560
>gi|18978065|ref|NP_579422.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|397652658|ref|YP_006493239.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
gi|24211503|sp|Q8U0A6.1|AROE_PYRFU RecName: Full=Shikimate dehydrogenase
gi|18893854|gb|AAL81817.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|393190249|gb|AFN04947.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
Length = 271
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 148/269 (55%), Gaps = 20/269 (7%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-DDIAKFFQTYSSNDFAGFSC 310
+TK++GIIG PV HS SPI++N FK G N ++V V D+ + D G +
Sbjct: 5 ETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQGVNV 64
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+KE +K DE+ +++IG+VN ++ +GKL GY TD +GA A+E
Sbjct: 65 TMPYKEEVIKFLDELSEDSQNIGSVNTVV--NLEGKLVGYTTDGIGARRALER------- 115
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ + G +++GAGGAGKA+AY +K A VV+ NRT ++A+ L E G S
Sbjct: 116 -----FTQVDGANILILGAGGAGKAIAYEL-SKVANVVVLNRTIEKAKRL-EKFGIVGDS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L L + E IL N TS+GM +++ +PK+ L +V D VY P T LLR A+
Sbjct: 169 LEALP-YYVEWADILINATSVGMNE--EKSLVPKNLLRPGLVVMDIVYKPLNTLLLRYAQ 225
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPG 519
E G + GL M + Q E + +TG G
Sbjct: 226 EKGCIAIDGLWMLVYQGAESFRLWTGEEG 254
>gi|428772149|ref|YP_007163937.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428686428|gb|AFZ46288.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
Length = 286
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 31/285 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TKV GIIG P+ HS SPI+ N A + + ++V V D + + + D GF+
Sbjct: 7 TKVLGIIGNPIEHSLSPIIQNRAIAFLNLDYIYVPFPVMGDSLQVALDGFRAIDVQGFNV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ A+ IGAVN + Q+ G NTD G I+ ++ R +
Sbjct: 67 TIPHKQAVMPFLSEISDTAQLIGAVNTV--WQTPEGWHGTNTDIDGFIAPLKALNRDWED 124
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL 429
V+ +++G GGA +A+ G G R + + R+ D+ ++ + L
Sbjct: 125 VTP-----------IILGNGGASRAVVVGCAQLGCREIKVVGRSLDKLQQFKNSWDEQLL 173
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+DL + P +I+ NTT +GM P VD++P+ + A+V+D +YT
Sbjct: 174 QAKITIHPWSDLNDTLPHSELIV-NTTPLGMSPHVDKSPLDDQQISLLKLGAIVYDLIYT 232
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP 524
P+ T LL++A+ GA I+ G EM + Q ++ +T + NAP
Sbjct: 233 PRPTLLLQKAQNQGAIIIDGTEMLVQQGAVGFQIWT----EKNAP 273
>gi|331092180|ref|ZP_08341010.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401952|gb|EGG81526.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 291
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 146/285 (51%), Gaps = 28/285 (9%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSND 304
RQ+ T + G++G PV HS SP+++NE+F+ +G N +++ VD + + + +
Sbjct: 3 RQIDGHTILTGLLGSPVSHSISPLMHNESFRQLGLNYIYLAFDVDVNRLETAVEGLRALN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
GF+ T+P+K + CD++ AK GAVN ++ DG L GY TD +G + ++++
Sbjct: 63 VRGFNLTMPNKNEMCRLCDKLSPAAKISGAVNTVV--NDDGVLTGYTTDGIGYMQSLKEA 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR--VVIANR--TYDRAREL 420
+ GK ++GAGGA A+ A G R V NR ++ R ++
Sbjct: 121 -----------GHDIIGKKMTMLGAGGASTAILVQAALDGVREISVFNNRSASFHRMEKV 169
Query: 421 AETVGGHALSLADLENFNPE--------DGMILANTTSIGMQPKVDETPIPKHALGHYAL 472
E + + L +++ E + ++L N TS+GM P D + I + H L
Sbjct: 170 IEDLKNVSDCEMHLYDYSDEHILRREISESVLLTNGTSVGMSPHTDASIITDADMFHKNL 229
Query: 473 VF-DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ D +Y P+ T+LLR A ESG ++GL M + Q E ++ +TG
Sbjct: 230 IVSDVIYNPRETKLLRMARESGCPTLNGLYMLLFQGAEAFKLWTG 274
>gi|406946091|gb|EKD77393.1| shikimate 5-dehydrogenase I alpha [uncultured bacterium]
Length = 276
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 18/278 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
T++ +IG P+ H+KSP+L+ ++ + N V + +++++ + A + T+
Sbjct: 16 TQLNLVIGYPLQHTKSPLLHTTIYRHLHCNAVMLAHATNNLSETMNAAKTLSVALMAVTM 75
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P+K+ + +V AK + +VN +I R D KLFGYNTD G A+ N+S
Sbjct: 76 PYKKEIINYLGDVSEEAKKLNSVNTVISR--DDKLFGYNTDVDGVAYALR-------NIS 126
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
LA K ++IGAGGA A AY + A + NRT L GG+ +
Sbjct: 127 ------LANKNTLIIGAGGASHAAAYFLNKQNANLWWLNRTEHHVLPLITKFGGNQVDKT 180
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+ F P D I+ NTT +GM P V ++P+P ++ +VFD VY P T L++ A E
Sbjct: 181 KINEF-PID--IIINTTPLGMFPDVHQSPLPNYSFNANQIVFDMVYNPIDTLLIKNAREK 237
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF 530
GA +SG++M IGQ +Q E + P ++ H+ K
Sbjct: 238 GAECISGIDMLIGQGIKQIELWLNKPVDISIDHIKKIL 275
>gi|402312231|ref|ZP_10831161.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
gi|400370892|gb|EJP23874.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
Length = 289
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-DDIAKFFQTYSSNDFAG 307
+ DTKV+GIIG PV HS SPIL N K + + + V ++I + + + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
F+ TIP+K+ + ++D AK IGA+N +I+ + K GYNTD +G ++ +
Sbjct: 62 FNVTIPYKKDMLDIVSDIDERAKKIGAINTLIKTEKGYK--GYNTDIIGLGMSLYNN--- 116
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG 426
S ++ GK +++GAGGA KA+ Y A +G + + + NR +A+EL VG
Sbjct: 117 --------SLSIKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELRAEVGI 168
Query: 427 HALSLADLE------NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV-FDAVYT 479
+S+ L+ N +D + TT++GM P V++ I + A D +YT
Sbjct: 169 KDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLIYT 228
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLL 533
P T +++ + G ++GL+M I Q +E + + K+ + K VLL
Sbjct: 229 PFETTFIKKMKSKGKICINGLDMLILQGVASFEIWNNI--KVKKDTIEKVKVLL 280
>gi|297571483|ref|YP_003697257.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
gi|296931830|gb|ADH92638.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
Length = 288
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 138/268 (51%), Gaps = 29/268 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 313
FG+IG P+ HS SP+++N +F+++G + + L V D+ +++ + AG + T+P
Sbjct: 5 FGLIGDPIEHSLSPLIHNTSFRALGIDATYSLLEVPDHDVPSAIRSFKNLGIAGINVTMP 64
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+K A + E+ A+ +VN + R D ++ G++TD +G + + D
Sbjct: 65 YKRAVLPALHELTPTAELAQSVNTVAFR--DNQIIGHSTDGLGMLKPLRDA--------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI-----------ANRTYDRARELAE 422
G+ L+ + +++G+GGAG ++A A GAR V A+R R REL +
Sbjct: 114 GID--LSHEHILILGSGGAGTSVALAAAQSGARRVTLMNREGAGLERAHRLAARIRELPD 171
Query: 423 ---TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
T+G L+ D ++ N T+ GM P TP+P L + +V DAVYT
Sbjct: 172 ESCTIGVVPLATTVETERCVRDATVILNCTAAGMNPNPHATPVPTEWLSNRHVVMDAVYT 231
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQA 507
P++T+ LR+A +GA GL M + QA
Sbjct: 232 PRVTQFLRDASVAGARTFDGLSMLVAQA 259
>gi|327507646|sp|C0NL63.1|ARO1_AJECG RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225560322|gb|EEH08604.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus G186AR]
Length = 1595
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 233/521 (44%), Gaps = 74/521 (14%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRTSVPLVFTIRTKGQGGRFPDDAY 1135
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K K+I S H+ + S + S
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLLRTVTEMK-GFSKIITSHHDPKGQLSWVNGSW 1194
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A I D + + ++ VPII + MG++G +SR+L
Sbjct: 1195 IQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML- 1253
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ +G K F +IG PV S+SP
Sbjct: 1254 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLIGEIKAKKFAVIGNPVSASRSPA 1308
Query: 271 LYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
++N F+ +G + L D ++AK F S F G S TIP K + + DE+
Sbjct: 1309 MHNTLFRQMGLPHTYGTLETDNPEVAKEF--IRSPGFGGASVTIPLKISIMPLLDEIAPE 1366
Query: 329 AKSIGAVNCII--RRQSDGK-----LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
A SIGAVN I+ DGK L G+NTD+ G + + D S+ L
Sbjct: 1367 AMSIGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAGL-- 1424
Query: 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNP 439
VIG GG +A + + G + + + R+ D+ + T H + + LE+
Sbjct: 1425 ----VIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRI--LEDVKA 1478
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD-----------------------A 476
+ + T +IG P + PI H +FD
Sbjct: 1479 LESL---PTVAIGTIP--GDKPIEPHMREILCRLFDLCEKANSDTEQARGVSTKRILLEM 1533
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
Y P +T L++ A +SG T++ GLE + Q Q E +T +
Sbjct: 1534 AYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNI 1574
>gi|301057600|ref|ZP_07198680.1| 3-dehydroquinate dehydratase, type I [delta proteobacterium NaphS2]
gi|300448324|gb|EFK12009.1| 3-dehydroquinate dehydratase, type I [delta proteobacterium NaphS2]
Length = 222
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+ +M + ++ + M A+ + DL+E+RLD +K+F+ ++ +I + P L TY
Sbjct: 1 MICIALMAQDTEEALKKMTVASPN-CDLMEVRLDVMKSFD----LEKIISSAQKPLLITY 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIV 141
R EGG+ D +N RVD L A+ LGADYIDVE + E D + RGK ++++
Sbjct: 56 RSKKEGGKGDIPDNARVDYLLEAVRLGADYIDVEYAMPLEHRDRLFEGRGKS----RLVL 111
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ---VPIIG 198
S H TPS E LS+L+ ++ A+GA +VK T A D V ++ S+ V +
Sbjct: 112 SKHFMDGTPSEETLSHLLKKMTATGAHVVKIVTQARTTLDNLSVLRLIPESEALGVKAVA 171
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
MG G ISR+ C GG TF G SAPGQ T K++
Sbjct: 172 FCMGPLGRISRVACPLLGGAFTFAAFREGQESAPGQITAKEM 213
>gi|219853166|ref|YP_002467598.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
gi|219547425|gb|ACL17875.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
Length = 457
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 134/267 (50%), Gaps = 21/267 (7%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSC 310
P + GI G P HS SP +Y F G + + + IA+ + + G S
Sbjct: 200 PAPGLCGIAGFPASHSISPQMYAALFARFGLDYRYTRIEWPSIAEIIAVFRAGRLRGLSV 259
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP KE + D +D A +IGAVN ++R +L G+NTD++G ++
Sbjct: 260 TIPFKEQVIPLLDTIDPDATAIGAVNTVVR--CGDELAGFNTDWLGVRKPLQQH------ 311
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G+ V+IGAGGA A AY K+ G + I NRT +R R LA
Sbjct: 312 ---------RGERAVLIGAGGAAAAAAYALKSLGMDLTILNRTEERGRVLAARFDCSTAP 362
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L+ + +PE ++ + T +GM P T + + L VFD VYTP++T LLREAE
Sbjct: 363 LSRFGDLDPE---VVVHATPVGMHPDTG-TLLTRADLDEGMTVFDLVYTPRMTPLLREAE 418
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
+GA ++ G EMFI QA Q+E FTG+
Sbjct: 419 AAGAWVIPGTEMFIHQACAQFEHFTGI 445
>gi|365845089|ref|ZP_09385887.1| shikimate dehydrogenase [Flavonifractor plautii ATCC 29863]
gi|364562013|gb|EHM39885.1| shikimate dehydrogenase [Flavonifractor plautii ATCC 29863]
Length = 465
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 136/276 (49%), Gaps = 28/276 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFS 309
TK +IG+PV HSKSP++ N ++G + V++ V ++ + +AGF+
Sbjct: 189 STKKLCVIGEPVLHSKSPLIQNTMLAALGLDYVYLCQPVPRGRCREWLECAKFAGYAGFN 248
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKE V+ DE+D A+ GAVN + R DG+ +GYNTD G + A+ D
Sbjct: 249 ATMPHKEELVELMDELDGDARLFGAVNTVCIR--DGRAYGYNTDGAGFLRALNDE----- 301
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
G+ A GK +V+GAGGA KA+ GA VV+ NRT D+A L H
Sbjct: 302 ----GIDPA--GKRVLVLGAGGAAKAVCLKLAQAGAEVVVCNRTADKATALC----AHEP 351
Query: 430 SLADLENFNPE-------DGMILANTTSIGMQPKVD--ETPIPKHALGHYALVFDAVYTP 480
+ F+P+ + +L N TS+GM+ E AL A V D +Y P
Sbjct: 352 ARLRPAGFDPDTLRREAAECGLLVNCTSLGMEGAAGQFEEFSFLDALPAGAPVVDLIYAP 411
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LLR A E G +G + + QA E FTG
Sbjct: 412 AETELLRRAREGGHQTANGFGLLVNQAVLSLEHFTG 447
>gi|407464424|ref|YP_006775306.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
gi|407047612|gb|AFS82364.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
Length = 273
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 150/279 (53%), Gaps = 24/279 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
+K F +IG P+ HS SP +++ AF+ + + ++ + ++A+ + GF+
Sbjct: 2 SKSFAVIGDPIDHSLSPNIHSAAFREMNLDSSYIAYRIPKGELAEGIEGLKKIKIDGFNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D IGAVN + + DG L GYNTD G + + + L
Sbjct: 62 TIPHKIEMMKYLDKIDESCSLIGAVNTVSNK--DGVLKGYNTDMDGFLEPFK---KKELK 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRAREL---AETVG- 425
+S +++GAGGA +A+ G AK K + IANRT ++A++L A+++G
Sbjct: 117 ISD--------TKVLLLGAGGAARAIVAGFAKEKAKSITIANRTLEKAKDLSKFAKSIGL 168
Query: 426 -GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
+A+ + D++ + +D I+ N TSIG++ + +PI + +V+D VY P T
Sbjct: 169 DANAIKIEDVKE-SAKDYDIIVNATSIGLRN--EPSPISLDGINEKTIVYDIVYMPMNTD 225
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
++ A+E + I+ G EM +GQA +E + G+ NA
Sbjct: 226 FIKNAKEKKSIIIYGYEMLLGQAVRSFEIWHGIEAPYNA 264
>gi|431429706|ref|ZP_19512808.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|431759137|ref|ZP_19547752.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
gi|430587940|gb|ELB26151.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|430626334|gb|ELB62910.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
Length = 284
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTYDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMPSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA+ ++ N+T+ + +E E +
Sbjct: 118 ---GIS--VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F D + +L N T IGM K+D++P+ + H L VFD +
Sbjct: 173 RTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|118591448|ref|ZP_01548846.1| shikimate 5-dehydrogenase [Stappia aggregata IAM 12614]
gi|118436120|gb|EAV42763.1| shikimate 5-dehydrogenase [Stappia aggregata IAM 12614]
Length = 282
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 23/277 (8%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
M K I G PV HS+SP+++ K G G + + V + F++ ++++ +
Sbjct: 1 MSGSVKKAAITGHPVTHSRSPLVHGYWLKKHGIEGEYGRIDVPPETAEDFYRNFAASGLS 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+P+KE A C +D AKS+GA N I + +G+L G NTD +G + ++
Sbjct: 61 GANVTVPNKEVAAAACGWLDDAAKSMGAANTIWLDE-NGRLCGANTDGLGFLGNLD---- 115
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVG 425
+L VS A VV+GAGGA +A+ + ++ V I NRT+++A+ +A+ G
Sbjct: 116 -QLAPGWDVSRESA----VVLGAGGAARAVVWALLSRKFTTVHIVNRTFEKAKAIADKFG 170
Query: 426 GHALSLA-DLENFNPEDGMILANTTSIGMQPK----VDETPIPKHALGHYALVFDAVYTP 480
++ D E +L NTTS+GM K +D P+PK AL V DAVY P
Sbjct: 171 SGTIAHEWDKLGTVLEQAELLVNTTSLGMTGKAPLEIDLAPLPKSAL-----VTDAVYAP 225
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LLR A E G V GL M + QA +ER+ G+
Sbjct: 226 LETDLLRRARERGNQTVDGLGMLLHQAVPAFERWFGV 262
>gi|154151105|ref|YP_001404723.1| shikimate 5-dehydrogenase [Methanoregula boonei 6A8]
gi|153999657|gb|ABS56080.1| shikimate 5-dehydrogenase [Methanoregula boonei 6A8]
Length = 462
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 21/267 (7%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSC 310
P T+ G+ G P GHSKSP+L+N F+ N + +I + G S
Sbjct: 205 PQTRFLGVAGWPCGHSKSPVLFNRLFEHYRLNCHYTRFEAPEIGPVMEMARLISAKGLSV 264
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP K+ + DE+D A+ IGAVN ++ + G+ +G+NTD++ G+R L
Sbjct: 265 TIPFKQDVMSYLDEIDEAAQKIGAVNTVV--FACGRAYGWNTDWI--------GIRKPL- 313
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ L+G V++GAGG A AY + ++I NRT ++AR LAE G +
Sbjct: 314 ------AHLSGSRAVLLGAGGVAAAAAYALRDLDMEIIILNRTPEKARALAERTGCRFGA 367
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
D + NP+ ++ N TSIGMQP +P+ L V D VYTP +T L+ A
Sbjct: 368 WDDFDRTNPD---LVVNATSIGMQPDTG-SPLRDDQLKKEMTVCDLVYTPPVTSLIAAAR 423
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGL 517
++G T + G E F+ QA EQ+ F G+
Sbjct: 424 KAGCTTILGTETFVYQAQEQFRLFFGI 450
>gi|418437218|ref|ZP_13009014.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS5]
gi|418443136|ref|ZP_13014735.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS7]
gi|387727206|gb|EIK14738.1| aroE- shikimate 5-dehydrogenase [Staphylococcus aureus subsp.
aureus VRS5]
gi|387736812|gb|EIK23900.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus VRS7]
Length = 268
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D VD + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 HKERIIPYLDYVDEQTINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D VY P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|422422214|ref|ZP_16499167.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313637775|gb|EFS03128.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 273
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 139/266 (52%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMEAEYNSVLIEENA--FETEIKKLMDSGIRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A GAVN ++R+ D K +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELEPLAADSGAVNTVLRK--DDKWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELA-ETVGGHALSL 431
+ ++ GAGGA KA+ K AR+ +ANRT ++A E+ + HA++L
Sbjct: 112 -IRPITEKDSILITGAGGASKAIYLALKNHTNARITVANRTANKAVEMTKDNDNHHAMTL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E N D I+ TTSIG++ + +PI L + D +Y P T L+EA+E
Sbjct: 171 QEAEK-NLADFTIIIQTTSIGLEASKNTSPISLTNLTKGTICSDIIYNPAETAFLKEAKE 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA I +GL MF+ Q +E +TG+
Sbjct: 230 NGAIIQNGLPMFVNQGALAFEIWTGV 255
>gi|145577901|gb|ABP82669.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 139/247 (56%), Gaps = 18/247 (7%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK + +K D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ R DGKL GYNTD +G + +++ ++S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQ-------SIS---KEPLYQKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLA-DLENFNPED 441
+++GAGGA +A+ + G + + IANRT ++A L S A LE E
Sbjct: 109 ILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATEEQ 168
Query: 442 GM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
G I+ +TT+IGM P + TP+ +L +V D +Y P T+LL++A+ GA + +G
Sbjct: 169 GNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAKGAIVQNG 228
Query: 500 LEMFIGQ 506
++MF+ Q
Sbjct: 229 IDMFVYQ 235
>gi|18309682|ref|NP_561616.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
gi|24211457|sp|Q8XMI8.1|AROE_CLOPE RecName: Full=Shikimate dehydrogenase
gi|18144359|dbj|BAB80406.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
Length = 271
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKVIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE N E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEINEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|444319524|ref|XP_004180419.1| hypothetical protein TBLA_0D04030 [Tetrapisispora blattae CBS 6284]
gi|387513461|emb|CCH60900.1| hypothetical protein TBLA_0D04030 [Tetrapisispora blattae CBS 6284]
Length = 1584
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 236/518 (45%), Gaps = 61/518 (11%)
Query: 40 VDMGKANASGADLVEIRLDGLKNFNPRENIK--TLIKES--PVPTLFTYRPIWEGGQYDG 95
VD +A G D VE+R+D L + N K ++++ S +P +FT R +GG++
Sbjct: 1086 VDNLRAITYGCDAVEVRVDHLSDLNCANVSKQISILRTSTDSLPIIFTVRTEEQGGKFPN 1145
Query: 96 DE-NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ--YTPSV 152
E + LA++ G ++ID+EL + + K K +VI S H++ Y
Sbjct: 1146 KEIKLLKKLFLLALKAGVEFIDIELTLPTSVQYMVLNSK-GKTRVIGSHHDFNGSYGWEE 1204
Query: 153 EDLSNLVARIQASGADIVKFATTALDITDVARVFQITV-HSQVPIIGLVMGERGLISRIL 211
+ N + A DI+KF +A +D + + H+ P+I + M G ISR+L
Sbjct: 1205 PEWENRYNQALAMDVDIIKFVGSAKKFSDNLALERFRENHTSKPLIAVNMSALGKISRVL 1264
Query: 212 CAKFGGFLTFGTLE--NGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSP 269
F+T T E G V+APGQ ++ ++ +Y + K++ ++G P+ HS+SP
Sbjct: 1265 ----NPFMTPITSELLPG-VAAPGQLSLSEINKIYTTIGGFTEKKLY-VVGSPISHSRSP 1318
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND--FAGFSCTIPHKEAAVKCCDEVDT 327
IL+N + +G F D++A+ + + G + TIP K ++ E+
Sbjct: 1319 ILHNTGYNILGLPYKFDKFETDNVARVKEALLDGEPQLGGLAVTIPLKLDIMQYMSELTD 1378
Query: 328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 387
AK IGAVN +I +GK G NTD++G ++++ + GV L+ +++
Sbjct: 1379 AAKIIGAVNTVIPL-GNGKFKGDNTDWLGIVNSL---------IGNGVPEKLSNTCGLIV 1428
Query: 388 GAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH-----ALSLADLENFN--- 438
GAGG +A Y K G +++ + NRT + EL + ++ D+E
Sbjct: 1429 GAGGTSRAAVYALKQLGCSKIYMINRTTTKLHELKKQFPEEYNIIIPETVDDVEKIKESV 1488
Query: 439 -------PEDGMILANTTS-----IGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
P D + + S + +P+V P + +A Y P T ++
Sbjct: 1489 SIAVSCVPADKSLDSELLSKLERFLNKKPRVSYVPT----------LLEAAYKPVQTPVM 1538
Query: 487 REAEESGATI-VSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ A E + + G ++ + Q Q+E++TG A
Sbjct: 1539 KLAHEKYQWVTIPGSQLLVYQGVAQFEQWTGFKAPFKA 1576
>gi|150261273|pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261274|pdb|2HK7|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261275|pdb|2HK8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261276|pdb|2HK8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261277|pdb|2HK8|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261278|pdb|2HK8|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261279|pdb|2HK8|E Chain E, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261280|pdb|2HK8|F Chain F, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261281|pdb|2HK8|G Chain G, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261282|pdb|2HK8|H Chain H, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
Length = 269
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 151/280 (53%), Gaps = 41/280 (14%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
+ T+++G+IG PV HS SP+ N + G N V++ + +++ K F+ + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+P KE + D V+ AK IGAVN + + +GK +GYNTD++G + +++
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 115
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
+ + K +V+GAGGA +A+ Y +GA+V + NRT ++A +LA+
Sbjct: 116 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 168
Query: 427 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 476
++ +PE+ + ++ NTTS+G++ DE P + +Y L V D
Sbjct: 169 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 214
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y K T+LL++A+E GA ++ GL M + Q E ++ + G
Sbjct: 215 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNG 252
>gi|150261283|pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261284|pdb|2HK9|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261285|pdb|2HK9|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261286|pdb|2HK9|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
Length = 275
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 151/280 (53%), Gaps = 41/280 (14%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
+ T+++G+IG PV HS SP+ N + G N V++ + +++ K F+ + +
Sbjct: 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+P KE + D V+ AK IGAVN + + +GK +GYNTD++G + +++
Sbjct: 68 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 121
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
+ + K +V+GAGGA +A+ Y +GA+V + NRT ++A +LA+
Sbjct: 122 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 174
Query: 427 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 476
++ +PE+ + ++ NTTS+G++ DE P + +Y L V D
Sbjct: 175 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 220
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+Y K T+LL++A+E GA ++ GL M + Q E ++ + G
Sbjct: 221 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNG 258
>gi|297529310|ref|YP_003670585.1| shikimate 5-dehydrogenase [Geobacillus sp. C56-T3]
gi|297252562|gb|ADI26008.1| shikimate 5-dehydrogenase [Geobacillus sp. C56-T3]
Length = 276
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 149/269 (55%), Gaps = 19/269 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
KV+G+IG PV HS SP+++N+AF +G + V+ + + AG + T
Sbjct: 3 KVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN I+ +G+L GYNTD G + A+E+ ++V
Sbjct: 63 IPHKLAVIPFLDEVDEQARRIGAVNTIV--NDNGRLVGYNTDGPGYVKALEE----EMDV 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG-GHA- 428
S L GK +VIGAGG + + + + A R+ +ANRT ++A L G G +
Sbjct: 117 S------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGGDGRSA 170
Query: 429 -LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
SLA+ E E +I+ NTTS+GM P+V+ P+ L +V D +Y P T+ L+
Sbjct: 171 YFSLAEAETRLDEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETKWLK 229
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+ GA + +G+ M + Q +E++TG
Sbjct: 230 EAKARGARVQNGVGMLVYQGALAFEKWTG 258
>gi|344300412|gb|EGW30733.1| hypothetical protein SPAPADRAFT_142469 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1563
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 236/507 (46%), Gaps = 55/507 (10%)
Query: 49 GADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105
G+D VE+R+D LK+++ E L K +P ++T R +GG + E VD LR
Sbjct: 1072 GSDAVELRVDLLKDYSLTFVAEQTAILRKYIDLPIVYTVRTKSQGGSF---PEENVDQLR 1128
Query: 106 ----LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLV 159
L ++LG Y+D+EL E + + K ++I S H++ ++ N
Sbjct: 1129 ELLLLGIKLGVGYLDLELTTPNEVIEQVLANKG-FTRIIGSHHDFTGALKWNNVEWKNKY 1187
Query: 160 ARIQASGADIVKFATTALDITDVA--RVFQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
+ + ADIVK TA D +F+ ++ P+I + MGE+G +SR+L
Sbjct: 1188 NQAVSLNADIVKLVGTAKSFQDNIDLEIFR-RENTLKPLIAVNMGEQGKLSRVLNPILTP 1246
Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAF 276
+T + N + GQ +IK++ F ++G T K F +IG P+ HS+SP L+N +
Sbjct: 1247 -ITHELIPNK-PTGTGQLSIKEINKA--FTEIGGFTHKKFYVIGSPIEHSRSPNLHNAGY 1302
Query: 277 KSVGFNGVFVHLLVDDIAKFFQTYSSN--DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 334
+ + F +D ++ + DF G + T+P K +K E+ AK IGA
Sbjct: 1303 EKLNLPYTFDRFEAEDADVVYEQLIKDKADFGGLAITMPLKLQIMKYATELSDAAKVIGA 1362
Query: 335 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF-VVIGAGGAG 393
VN +I Q G FG NTDYVG I++ + GV S K+ +VIG GG
Sbjct: 1363 VNTLIPVQ--GGYFGDNTDYVGIINSF---------IRNGVPSIENSKVNGLVIGGGGTS 1411
Query: 394 KALAYGAKAKGA-RVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTS 450
+A Y G ++ NRT + E+ E+ + L E + + + L +
Sbjct: 1412 RAAIYALHEMGCDKIYWVNRTSSKLHEIKESFPSDYNIEILETKEQVDASEPVSLV-VSC 1470
Query: 451 IGMQPKVDETPIPK-HAL----------GHYALVFDAVYTPKITRLLREAEES-GATIVS 498
+ ++D+ + K AL G + +A Y P++T +++ A++ ++
Sbjct: 1471 VPATSELDKDLLVKIEALLLKGSESKQGGFVPNLLEAAYKPRVTPVMKLAQDKYEWNVIP 1530
Query: 499 GLEMFIGQAYEQYERFTGLPGKMNAPH 525
G+EM + Q Q++ TG NAP+
Sbjct: 1531 GVEMLVNQGERQFKIHTGF----NAPY 1553
>gi|254581466|ref|XP_002496718.1| ZYRO0D06578p [Zygosaccharomyces rouxii]
gi|327507680|sp|C5DVG6.1|ARO1_ZYGRC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238939610|emb|CAR27785.1| ZYRO0D06578p [Zygosaccharomyces rouxii]
Length = 1589
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 225/494 (45%), Gaps = 45/494 (9%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTL-IKESPVPTLFTYRPIWEGGQY-DGDENERVDV 103
G D VE+R+D L ++ + + + TL + +P +FT R +GG++ D D +
Sbjct: 1100 GCDAVELRVDHLAKYDSQFVSKQLSTLRTATNDLPIVFTLRTKKQGGKFPDEDYTGMARL 1159
Query: 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTPSVEDLSNLVAR 161
+A++ +YID+EL + + + K K+I S H++ +Y + N +
Sbjct: 1160 FDVALKACVEYIDLELTLPIDVQYKVSNTK-GYTKIIGSHHDFGAKYPWKDPEWENRYNQ 1218
Query: 162 IQASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+ D++KF TA D + + H P+I + MGE G ISR+L +T
Sbjct: 1219 ALSLDVDVIKFVGTATKFEDNLALERFREEHKSKPLIAINMGEIGKISRVLNPILTP-IT 1277
Query: 221 FGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT-KVFGIIGKPVGHSKSPILYNEAFKSV 279
L N SAPGQ T+ + + F MG T K F ++G PV HS+SP+L+N +K
Sbjct: 1278 SEHLPNS--SAPGQLTLAQINKI--FASMGGITSKKFFVVGNPVSHSRSPVLHNTGYKLN 1333
Query: 280 GFNGVFVHLLVDDIAKFFQTYSSND--FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
G F D +T + G + TIP K +K +++ A+ IGA+N
Sbjct: 1334 GLPHHFDRFETDSAQVVKETLLDGEPSLGGLAVTIPLKLDIMKYMNQLTDAARVIGAMNT 1393
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
+I + G NTD++G ++ S GV ++ +VIGAGG +A
Sbjct: 1394 VIPL-GNHHFKGDNTDWIGIKHSL---------TSNGVPEKVSNVAGLVIGAGGTSRAAI 1443
Query: 398 YGAKAKGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
Y G R+ + NRT ++ EL ++ A + +++ N G+ + + +
Sbjct: 1444 YSLHNLGCHRIFVINRTVSKSIELRDSFPQEYNVVAAETTQQIDHLNEHIGIAV---SCV 1500
Query: 452 GMQPKVDETPIPK-----HALGHYALV---FDAVYTPKITRLLREAEES-GATIVSGLEM 502
+D + K H H + V +A Y P +T +++ A + +V G E+
Sbjct: 1501 PADKDLDTELLAKLERFLHKGKHNSFVPTLLEAAYKPDVTPVMKLAHDKYQWQVVPGREL 1560
Query: 503 FIGQAYEQYERFTG 516
+ Q Q+E +TG
Sbjct: 1561 LVHQGVAQFEIWTG 1574
>gi|146296089|ref|YP_001179860.1| shikimate 5-dehydrogenase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166219462|sp|A4XID4.1|AROE_CALS8 RecName: Full=Shikimate dehydrogenase
gi|145409665|gb|ABP66669.1| shikimate 5-dehydrogenase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 279
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 23/261 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYSSNDFAGFSCTIP 313
+IGK + HS SP+++N+ + G + V+ ++ + D K + D GF+ TIP
Sbjct: 6 LIGKSLKHSISPLIHNKILSNFGIDAVYSNVELPDFEKLKEFVEMVKKDGDVVGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE ++ CDEV + I A N + ++ KL YNTD++G ++E+
Sbjct: 66 YKEDILEFCDEVSEDVRIIQAANTV--KKEGEKLVAYNTDWLGFKRSLEE---------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--HALS 430
V ++ K +++GAGGA KA YG G + V +ANRTY++A L E L
Sbjct: 114 -VGISVKDKRILILGAGGAAKACIYGLYRMGVKEVFVANRTYEKAESLKEVFQDILKILP 172
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITRLLRE 488
+ L + + +I+ NTTS+GM P ++ +P + G V+D +Y P T L E
Sbjct: 173 VEWLRRYEFKYDIII-NTTSVGMFPNIESSPFDFENYVAGIPVFVYDMIYNPPKTTFLEE 231
Query: 489 AEESGATIVSGLEMFIGQAYE 509
AE+ G+ +GL+M + QA E
Sbjct: 232 AEKKGSKTENGLKMLVYQAVE 252
>gi|375082963|ref|ZP_09730003.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
gi|374742310|gb|EHR78708.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
Length = 272
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 150/268 (55%), Gaps = 21/268 (7%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T+++G+IG PV HS SP+++N AFK++G N +++ V + + + + +G +
Sbjct: 5 ETRLYGVIGFPVRHSLSPVMHNAAFKALGINAIYLAFEVPPERLGDAMEGVRALGISGLN 64
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKEA + D + + IG+VN ++ R+ GKL G+ TD +GA A+E +
Sbjct: 65 VTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNRK--GKLEGHTTDGLGARRALERAIE--- 119
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVGGHA 428
L G+ ++IGAGGAGKA+AY +K VV+ NRT ++A+ L + G A
Sbjct: 120 ---------LGGRRILIIGAGGAGKAIAY-ELSKDNEVVVLNRTPEKAKALERFGIMGEA 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
L+ +L + E +L N TS+GM ETP+P L +V D VY P TRLL E
Sbjct: 170 LNRENLGKY-LEWAEVLINATSVGMNSW--ETPVPGEMLRKDLVVMDIVYKPLKTRLLTE 226
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
AE G V GL M + Q E ++ +TG
Sbjct: 227 AELMGCKTVDGLWMLVYQGIESFKLWTG 254
>gi|345515156|ref|ZP_08794662.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
gi|229434416|gb|EEO44493.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
Length = 246
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 26/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K +G+IG P+GHS S +NE F S + +V+ + I + +N D GF+ TI
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNC--IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + DE+D A +IGAVN I+R++ KL GYN+D +G +I+ L +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSIDPLLEPQ-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+AYG K G +R RE E + L+
Sbjct: 120 ----------HKKALILGTGGASKAIAYGLKKLGLECKFVSRN---LRE--EMLTYDQLT 164
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++ + ++ N T +GM P+ DE P IP L L++D +Y P T +++
Sbjct: 165 PEIMDEYK-----VIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMKKG 219
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
+ GA +GLEM + QA+ ++
Sbjct: 220 ADKGAITKNGLEMLLLQAFGAWD 242
>gi|16800593|ref|NP_470861.1| hypothetical protein lin1525 [Listeria innocua Clip11262]
gi|16413998|emb|CAC96756.1| lin1525 [Listeria innocua Clip11262]
Length = 273
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+IG P+ HS SP + N F+ +G N + +L+ D + + GF+ T P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFETEIKKLMDSGVRGFNITTPFK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E + DE++ +A + GAVN ++R+ DGK +G+NTD G + +E+ +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-----------I 112
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELA-ETVGGHALSLAD 433
S ++ GAGGA KA+ K+ A++ +ANRT ++A E+ + HA++L
Sbjct: 113 RSITKDDSILITGAGGASKAIYLALKSHTEAKITVANRTTEKAIEMTKDNDNHHAMTLEQ 172
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
E D I+ TTSIG++ +++PI L + D +Y P T L+EA+++G
Sbjct: 173 AEK-ELADFTIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKKNG 231
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
A +GL MF+ Q +E +TG+
Sbjct: 232 AITQNGLPMFVNQGALAFEIWTGI 255
>gi|418616268|ref|ZP_13179193.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
gi|374821094|gb|EHR85161.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
Length = 269
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVYQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ G
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEG------ 114
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ +++GAGGA K +A K + +ANRT R + + LS A
Sbjct: 115 -----IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|354547466|emb|CCE44200.1| hypothetical protein CPAR2_400020 [Candida parapsilosis]
Length = 1557
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 225/509 (44%), Gaps = 48/509 (9%)
Query: 47 ASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVD 102
A GA+ VE+R+D L ++ + + L K +P ++T R +GG + D D +
Sbjct: 1060 AVGANAVELRVDLLAKYDASYIADQVGLLRKTVDLPIIYTIRTKSQGGMFPDEDLDSIKS 1119
Query: 103 VLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARI 162
+L +++G D ID++L + D + K+ KVI S H++ +++
Sbjct: 1120 LLLFGIKIGVDVIDLQLISPNDVIDEVMAKR-SHTKVIASHHDFTGQLKWDNVEWKTKYD 1178
Query: 163 Q--ASGADIVKFATTALDITDVARVFQI-TVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
Q A ADIVK A+D D + + + ++ P+IGL MG +G +SR+L F
Sbjct: 1179 QGVAINADIVKLVGKAVDFNDNLLLEKFRSENTTKPLIGLNMGPKGKLSRVLNTVFTP-- 1236
Query: 220 TFGTLENGIVSAP---GQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAF 276
+ I P GQ T K++ + Y F+ G F ++G P+ HS+SP L+N +
Sbjct: 1237 ---VTHDLITDKPQGVGQLTFKEINEAY-FQIGGFIENRFWVVGSPIEHSRSPALHNAGY 1292
Query: 277 KSVGFNGVFVHLLVDDIAKFF-QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAV 335
K++ F D + Q +DF G + T+P K +K ++ AK +GA+
Sbjct: 1293 KALSLPYKFDRFESSDAETVYKQLMLRSDFGGLAITMPLKLDMMKYVTKLSDAAKLVGAI 1352
Query: 336 NCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKA 395
N I+ G G NTD+VG ++ + SG + L V G +A
Sbjct: 1353 NTIVPIDGGGGFLGDNTDWVGITNSFKQ--------SGFIGGNNVNGLVVGGGG--TSRA 1402
Query: 396 LAYGAKAKGA-RVVIANRTYDRARELA---------------ETVGGHALSLA--DLENF 437
Y G ++ + NRT + ++A E V G +SLA + +
Sbjct: 1403 AIYALHKLGCEKIYLLNRTVSKLHDVASSFPKEYNLEVVEQEEQVSGKPVSLAVSCVPSS 1462
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES-GATI 496
P D +L I + T A L+ +A Y P++T ++R AEE +
Sbjct: 1463 APLDETLLQRLELI-LDSNKPTTAAAAAADEEAPLLLEAAYKPRVTPVMRLAEEKYNWRV 1521
Query: 497 VSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
+ G+EM + Q EQ++ TG + H
Sbjct: 1522 IQGVEMLVNQGEEQFKIHTGFAPPYDVIH 1550
>gi|407476613|ref|YP_006790490.1| shikimate dehydrogenase [Exiguobacterium antarcticum B7]
gi|407060692|gb|AFS69882.1| Shikimate dehydrogenase [Exiguobacterium antarcticum B7]
Length = 262
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 133/264 (50%), Gaps = 26/264 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+L+ K+ G G + V + D + + G + TIP
Sbjct: 3 FAVIGHPIAHSLSPMLHETWLKAAGLFGCYTMVDVEADALESLVMRLRNRQLDGINVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVS 372
+K A + D ++ A GAVN + DG +L G NTD +G A L
Sbjct: 63 YKTAIIPFLDRLEPAAARAGAVNTVYW---DGDELVGANTDGIGFARA--------LATQ 111
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
G ++ L +VIGAGGA + + A RV + NRT A+++A G +++ +
Sbjct: 112 GTTTTNL-----LVIGAGGAARGII---PALSGRVTVMNRTDATAQQVATEFGCNSIPWS 163
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
+ + P D ++ NTTS+GM P ++ PI AL+ D +Y P TRLLREA S
Sbjct: 164 TVVDLTPYD--VVINTTSVGMAPHLEVMPI--ELTETTALICDIIYRPTPTRLLREATAS 219
Query: 493 GATIVSGLEMFIGQAYEQYERFTG 516
G + G+ MF+ QA E +ERFTG
Sbjct: 220 GLATLDGVLMFVLQAAEAFERFTG 243
>gi|428207318|ref|YP_007091671.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428009239|gb|AFY87802.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
Length = 294
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 141/267 (52%), Gaps = 17/267 (6%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP ++N A +G + V++ L V +D+A Q +++ GF+
Sbjct: 6 TKLLGVIGHPVEHSLSPAMHNAAIAHLGLDYVYLPLPVKPEDLAAALQGFAAIGLVGFNA 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + EV VA+++GAVN + R +D G NTD G ++ + + +
Sbjct: 66 TIPHKQAILPFLSEVSPVAQAVGAVNTVWR--TDEGWAGTNTDVEGFLAPLLE-KSKVKS 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ S + ++ V++G GGA +A+ G G A + + R + +E + +
Sbjct: 123 QKSKIDSPDSPQIAVILGNGGAARAVVAGCSQLGCAEICVVGRNEVKLQEFYTSWSNSQV 182
Query: 430 SLADLENFNPED-------GMILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYT 479
A+L+ + + +L NTT IGM P VD +P+ L A+ +D +YT
Sbjct: 183 Q-ANLQVYTWDKLPDLIARADLLVNTTPIGMYPHVDRSPLSLSEMAVLKQGAIAYDLIYT 241
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
P+ T L++A++ GA + GLEM + Q
Sbjct: 242 PRPTLFLQQAQQQGARTIDGLEMLVQQ 268
>gi|33236917|gb|AAP99004.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae TW-183]
Length = 503
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 212/469 (45%), Gaps = 52/469 (11%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
D++E+RLD + + +E + TLI + P L T+R + + L +L
Sbjct: 52 DIIELRLDLINELDDQE-LHTLITTAQNPIL-TFR-----QHKEMSTALWIQKLYSLAKL 104
Query: 111 GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170
++D+++ + + +IR P K K+I+S H T EDL + + A+ A+I
Sbjct: 105 EPKWMDIDVSLPKTALQTIRKSHP-KIKLILSYH----TDKNEDLDAIYNEMLATPAEIY 159
Query: 171 KF------ATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTL 224
K ++ AL+ AR+ P L MG GL SR+L + +
Sbjct: 160 KIVLSPENSSEALNYIKKARLL------PKPSTVLCMGTHGLPSRVLSPLISNAMNYAAG 213
Query: 225 ENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGV 284
+ APGQP +++LL YN+ ++ + ++G+IG PV S S + +N + N
Sbjct: 214 ISAPQVAPGQPKLEELLS-YNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLSLNAT 272
Query: 285 FVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ 342
++ V ++ FF F+G S T+P K A D +D A+ ++N ++ R
Sbjct: 273 YIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTLVFR- 331
Query: 343 SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA 402
+ K+ GYNTD G ++ N+S + K ++GAGGA KA+A
Sbjct: 332 -NQKILGYNTDGEGVAKLLKQK-----NIS------VNNKHIAIVGAGGAAKAIAATLAM 379
Query: 403 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI 462
+GA + I NRT A LA G A L LENF D I+ N + P+V
Sbjct: 380 QGANLHIFNRTLSSAAALATCCKGKAYPLGSLENFKTID--IIINC----LPPEV----- 428
Query: 463 PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
+V D P + L A++ G+ I+ G EMFI QA Q+
Sbjct: 429 -TFPWRFPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQF 476
>gi|392376053|ref|YP_003207886.1| shikimate dehydrogenase [Candidatus Methylomirabilis oxyfera]
gi|258593746|emb|CBE70087.1| Shikimate dehydrogenase [Candidatus Methylomirabilis oxyfera]
Length = 285
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 143/274 (52%), Gaps = 24/274 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDI---AKFFQTYSSNDFAGFSC 310
K+F + G PV HS SP++ N A ++ G +G+++ V A F +F G +
Sbjct: 8 KLFILFGDPVAHSLSPVMQNAALQAAGIDGLYIPWRVQSAGLPAAFESLRGMENFGGANV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKE A D + A ++GAVN ++ R DG L G NTD +G + ++ +
Sbjct: 68 TVPHKEQAFALVDTLTPEATAVGAVNTVVAR--DGHLLGANTDGLGFLRSLHEE------ 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAE----TVG 425
+ GK V++GAGGA +A+A+ GA +VI NRT RAR LAE +G
Sbjct: 120 ----ANFLPRGKPSVILGAGGAARAVAWSLAEAGAEPIVIVNRTAPRARSLAEFVYRNIG 175
Query: 426 GHALSLADLENFNP---EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
LA + P D ++ NTTS+G+ P D PI + L ALV+D +Y P+
Sbjct: 176 TSTTGLAIDDPQMPAIVRDCALVVNTTSVGLNPS-DPPPIDPNILQPRALVYDLIYRPQE 234
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T LLREA+ G ++ GL M + Q +E +TG
Sbjct: 235 TALLREAKRRGCRVIGGLGMLLYQGALAFELWTG 268
>gi|345879842|ref|ZP_08831408.1| hypothetical protein HMPREF9431_00072 [Prevotella oulorum F0390]
gi|343918909|gb|EGV29667.1| hypothetical protein HMPREF9431_00072 [Prevotella oulorum F0390]
Length = 247
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 138/265 (52%), Gaps = 32/265 (12%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
+ FG+IG P+GHS S +NE F + G + + + +++IA + + N G + T+
Sbjct: 2 ETFGLIGYPLGHSFSISFFNEKFANEGIDAQYCNFQIENIASLPEVLAQNPTLKGLNVTL 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLN 370
P+KEA + D++ A++IGAVN I GK L G+N+D +G +IE L R +
Sbjct: 62 PYKEAVISFLDDITPEARAIGAVNVIRVEHKGGKTLLKGFNSDVIGFTKSIEPMLE-RFH 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GG+ KA+ YG ++ G + +RT A+ A T
Sbjct: 121 -----------KKALILGTGGSAKAIHYGLRSLGLETLFVSRT---AKADAITY------ 160
Query: 431 LADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLL 486
+ PE D ++ N T GM PK D P +P A+G + L++D +Y P TR +
Sbjct: 161 ----DEVTPELIRDYHVVVNCTPCGMYPKADACPPLPYDAMGSHHLLYDLIYNPDETRFM 216
Query: 487 REAEESGATIVSGLEMFIGQAYEQY 511
++ E GA + +GLEM + QA+E +
Sbjct: 217 QKGIERGALVKNGLEMLLLQAFESW 241
>gi|417912227|ref|ZP_12555922.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|418621436|ref|ZP_13184212.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|420187201|ref|ZP_14693222.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
gi|341651238|gb|EGS75043.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU105]
gi|374829380|gb|EHR93184.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU123]
gi|394256180|gb|EJE01113.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM039]
Length = 269
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ V+ + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G ++ ++ G
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEG------ 114
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ +++GAGGA K +A K + +ANRT R + LS A
Sbjct: 115 -----IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNNNKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256
>gi|407462089|ref|YP_006773406.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
gi|407045711|gb|AFS80464.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
Length = 273
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 149/282 (52%), Gaps = 32/282 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HS SP +++ AF+ + + ++ + +++ + + GF+ T
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKEELGEGIEGLKKIKINGFNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK +K D++D IGAVN ++ +DG L GYNTD G + ++ + NV
Sbjct: 63 IPHKVEMMKYLDKIDESCSLIGAVNTVV--NNDGILKGYNTDMDGFLEPLK-----KRNV 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAE-----TVG 425
+A +++GAGGA +A+ G AK K + IANRT ++A L E ++
Sbjct: 116 D------IANSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANSLVEFAQKISLS 169
Query: 426 GHALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
+A+++ + +N+N I+ N TSIG+ K + +PI + +V+D VY P
Sbjct: 170 ANAITVDKVGESAKNYN-----IIVNATSIGL--KNESSPISLEGIDKETVVYDIVYMPM 222
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
T L++A+E A ++ G EM +GQA +E + G+ NA
Sbjct: 223 HTDFLKKAKEKNAIVIFGYEMLLGQAARAFEIWHGMEAPYNA 264
>gi|289434770|ref|YP_003464642.1| hypothetical protein lse_1405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171014|emb|CBH27556.1| aroE-2 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 139/266 (52%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G + +L+++ A F+T + GF+ T P
Sbjct: 24 VIGNPIRHSLSPAMQNRIFQELGMEAEYNSVLIEENA--FETEIKKLMDSGIRGFNITTP 81
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A GAVN ++R+ D K +G+NTD G + +E+
Sbjct: 82 FKERILPFLDELEPLAADSGAVNTVLRK--DDKWYGFNTDGKGYLEGLEE---------- 129
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELA-ETVGGHALSL 431
+ ++ GAGGA KA+ K AR+ +ANRT ++A E+ + HA++L
Sbjct: 130 -IRPITEKDSILITGAGGASKAIYLALKNHTNARITVANRTANKAVEMTKDNDNHHAMTL 188
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E N D I+ TTSIG++ + +PI L + D +Y P T L+EA+E
Sbjct: 189 QEAEK-NLADFTIIIQTTSIGLEASKNTSPISLTNLTKGTICSDIIYNPAETAFLKEAKE 247
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA I +GL MF+ Q +E +TG+
Sbjct: 248 NGAIIQNGLPMFVNQGALAFEIWTGV 273
>gi|393786807|ref|ZP_10374939.1| shikimate 5-dehydrogenase [Bacteroides nordii CL02T12C05]
gi|392658042|gb|EIY51672.1| shikimate 5-dehydrogenase [Bacteroides nordii CL02T12C05]
Length = 247
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F+S G + +V+ + I F + N + +G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGYFNEKFRSEGVDAEYVNFEIPSINDFMEVIEENPNLSGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + D +D IGAVN I I RQ GK L GYN+D +G +I+ L
Sbjct: 64 KEQVIPFLDSLDPDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLLP---- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ K +++G GGA KA+ +G K G V +RT H +
Sbjct: 120 --------SHKKALLLGTGGASKAVFHGLKNLGIESVFVSRT-------------HKPGM 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 159 LTYEELTPEVMAEYTVIVNCTPVGMYPKVDFCPNIPYEYLTPNHLLYDLLYNPNVTLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEERGAITKNGLEMLLLQAFAAWE 243
>gi|367035610|ref|XP_003667087.1| hypothetical protein MYCTH_2312474 [Myceliophthora thermophila ATCC
42464]
gi|347014360|gb|AEO61842.1| hypothetical protein MYCTH_2312474 [Myceliophthora thermophila ATCC
42464]
Length = 1576
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 231/509 (45%), Gaps = 61/509 (11%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL- 104
G+D VE+R+D L++++P + L + +P ++T R + +GG++ D+ E L
Sbjct: 1072 GSDAVELRVDLLESYDPEFVAHQVALLRSVAKIPIVYTVRTVSQGGRFPDDDYELARRLY 1131
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
++ + G +++D+E+ + + +++ K ++I S H+ Q S + S + +A
Sbjct: 1132 QIGLRTGVEFLDLEVTMPADILEAVTVSK-GFTRIIASHHDPQSKLSWRNGSWIPFYNKA 1190
Query: 165 -SGADIVKFATTALDITD----VARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
D++K A +I+D + ++ PII L MG G +SR+L GF+
Sbjct: 1191 LQYGDVIKLVGMAGEISDNFALTSFKTKMLAAHDTPIIALNMGPAGKLSRVL----NGFM 1246
Query: 220 TFGTLEN-GIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
T + + +APGQ + ++ L ++ P K F + GKP+ S+SP L+N F
Sbjct: 1247 TPVSHPDLPAKAAPGQLSATEIRQALALIGELEP--KSFYLFGKPISSSRSPALHNTLFG 1304
Query: 278 SVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
+ G + D + + F G S TIP K V D++ A++IGAVN
Sbjct: 1305 ATGLPHHYSLFETDKASDVQDLIRAPHFGGASVTIPLKLDIVPLLDDISEAARAIGAVNT 1364
Query: 338 IIRRQSDGK------LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG 391
II S K L G NTD+ G + A+ S GV+S + V+G+GG
Sbjct: 1365 IIPIPSAAKGDNKTTLLGDNTDWRGMVFALR---------SAGVASPPGAGM--VVGSGG 1413
Query: 392 AGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALS-----LADLENFNPEDGMIL 445
+A Y + G A + + RT +R +ELA GG LA E
Sbjct: 1414 TTRAAIYALHSLGYAPIYVVARTPERVKELA---GGFPADYRIQHLATREEAVAVAVAAR 1470
Query: 446 ANTTSIGMQPKVDETPIPK-------HALGHYA----------LVFDAVYTPKITRLLRE 488
++ + + PI AL ++ + YTP+ T L++
Sbjct: 1471 HELPTVVISTIPADKPIDSGMREVLVTALQGGGAAGKEKGEPRVLLEMAYTPRHTPLMQL 1530
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGL 517
AE++G + GLE+ Q + Q++ +TG+
Sbjct: 1531 AEDAGWVTIPGLEVLAAQGWYQFQLWTGI 1559
>gi|422415991|ref|ZP_16492948.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313623707|gb|EFR93855.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 273
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+IG P+ HS SP + N F+ +G N + +L+ D + + GF+ T P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEAEVKKLMDSGVRGFNITTPFK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E + DE++ +A + GAVN ++R+ DGK +G+NTD G + +E+ +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-----------I 112
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTYDRARELA-ETVGGHALSLAD 433
S ++ GAGGA KA+ K+ A++ +ANRT ++A E+ + HA++L
Sbjct: 113 RSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHHAMTLEQ 172
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
E D I+ TTSIG++ +++PI L + D +Y P T L+EA+++G
Sbjct: 173 AEK-ELADFTIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKKNG 231
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
A +GL MF+ Q +E +TG+
Sbjct: 232 AITQNGLPMFVNQGALAFEIWTGI 255
>gi|182624165|ref|ZP_02951952.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
gi|177910781|gb|EDT73141.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
Length = 271
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+G GGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGTGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE N E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEINEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|2492977|sp|Q12659.1|ARO1_PNECA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|475972|gb|AAA17839.1| pentafunctional enzyme [Pneumocystis carinii]
Length = 1581
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 222/500 (44%), Gaps = 49/500 (9%)
Query: 47 ASGADLVEIRLDGLKNFNPRE------------NIKTLIKESPVPTLFTYRPIWEGGQYD 94
+G D +EIR+D + P E I L +++ +P ++T R GG +
Sbjct: 1082 TAGCDAIEIRIDLFQK--PEEIDKYPSLEYIAEKIFLLRQKTSLPLIYTLRTTNHGGSFL 1139
Query: 95 GDENERV-DVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVE 153
E + + + + G +++D+EL +A E +I P K+I S HN + S +
Sbjct: 1140 SSEKKLAKEYILHGAKWGFEFLDIELDIASELFKTINNSWP-YTKIIASYHNIEKPISCD 1198
Query: 154 DLSNLVARIQASG-ADIVKFATTALDITD---VARVFQITVHSQVPIIGLVMGERGLISR 209
D + +A I+K T+ I D + ++ +VP I + G +G +SR
Sbjct: 1199 DFEWIQKYKEAQHYGHIIKLVGTSSSIEDNFFLEEFKSKFINKKVPSIIINTGIKGQLSR 1258
Query: 210 ILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSP 269
I+ F +T +L + I APGQ +IK++ + + P+ K F + GKP+ HS+SP
Sbjct: 1259 IMNT-FMTPVTHPSLPSKI--APGQLSIKEINTALHIMGLLPEKKYF-LFGKPIKHSQSP 1314
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N F+ +G + D I++ + +F G S TIP K DE+ A
Sbjct: 1315 NIHNLGFEILGLPYKYQLFETDSISELKEILHLEEFGGASVTIPLKTNISILLDEISDHA 1374
Query: 330 KSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIED---GLRGRLNVSGGVSSALAGKLF 384
IG+VN I R ++G+ L G NTD+ G I AI++ + N SG
Sbjct: 1375 ALIGSVNTITRTYNNGQYILKGENTDWQGIIKAIKNFNKFEKSFENFSG----------- 1423
Query: 385 VVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHALSLADLENFNPEDG 442
+IGAGGA +A Y + G + + + NR+ D+ +L H + + + N +
Sbjct: 1424 FIIGAGGASRAAIYALLSLGISPIYLINRSKDKLNKLYHFFNTNHIIPITEYHELNNINF 1483
Query: 443 MILANTTSIGMQPKVDETPIPKHAL-------GHYALVFDAVYTPKITRLLREAEESGAT 495
I ++I +D + + + + D Y T L A+
Sbjct: 1484 DIRIGISTIPTDNPIDPSVLEIAKIFFNLKRKSSEGIFLDMAYGSNTTDLTIIAKACNWK 1543
Query: 496 IVSGLEMFIGQAYEQYERFT 515
I+ GLE+ + Q EQ+ +T
Sbjct: 1544 IIHGLEILLEQGSEQFLLWT 1563
>gi|422412979|ref|ZP_16489938.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
gi|313618856|gb|EFR90731.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
Length = 273
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+IG P+ HS SP + N F+ +G N + +L+ D + + GF+ T P K
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEVEIKKLMDSGVRGFNITTPFK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E + DE++ +A + GAVN ++R+ DGK +G+NTD G + +E+ +
Sbjct: 66 ERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDGKGYLEGLEE-----------I 112
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTYDRARELA-ETVGGHALSLAD 433
S ++ GAGGA KA+ K+ A++ +ANRT ++A E+ + HA++L
Sbjct: 113 RSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHHAMTLEQ 172
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
E D I+ TTSIG++ +++PI L + D +Y P T L+EA+++G
Sbjct: 173 AEK-ELADFTIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAETAFLKEAKKNG 231
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
A +GL MF+ Q +E +TG+
Sbjct: 232 AITQNGLPMFVNQGALAFEIWTGI 255
>gi|126724530|ref|ZP_01740373.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium HTCC2150]
gi|126705694|gb|EBA04784.1| shikimate 5-dehydrogenase [Rhodobacteraceae bacterium HTCC2150]
Length = 278
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 15/271 (5%)
Query: 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAG 307
GP + G+IG P+ HSKSP L+ KS+G G ++ + V +++ + + F G
Sbjct: 3 GPKIPLAGVIGHPIAHSKSPRLHGHWLKSLGIAGHYIPMDVAPENLEETLRLLPKIGFRG 62
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
+ T+PHK+AA++ D V A IGA N +I R+ DG++ NTD G + I+ G
Sbjct: 63 VNITLPHKQAAMQIADLVTDRAALIGAANTLIFRK-DGRIHADNTDGYGFVENIKSGAPT 121
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG 426
G + V+GAGGA A+ G V I+NRT RA L E G
Sbjct: 122 WKPKEGPAA---------VLGAGGASAAIVSALLEVGVPEVRISNRTRVRAEGLRERFGA 172
Query: 427 HALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
++ N ++ + + N+TS+GM+ + E +P L A+V D VYTP TRL
Sbjct: 173 RVTVYDWVQAGNMIDEAVTVVNSTSLGME-GMPELRVPLDGLSEQAVVTDLVYTPLETRL 231
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+REA+ G V GL M I QA +ER+ G
Sbjct: 232 IREAKSIGCRTVDGLGMLIHQAVPGFERWFG 262
>gi|71019047|ref|XP_759754.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
gi|74701529|sp|Q4P8F6.1|ARO1_USTMA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|46099277|gb|EAK84510.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
Length = 1715
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 244/540 (45%), Gaps = 82/540 (15%)
Query: 40 VDMGKANASGADLVEIRLDGLK---------NFNPRENIKT----LIKESPVPTLFTYRP 86
+++ ++ SG+D +E R D L P E +K L + +P +FT R
Sbjct: 1175 LELIRSMESGSDALEFRADLLNPSGQPVTTPQIPPTEYVKNQLAALRHRTSLPIVFTVRT 1234
Query: 87 IWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
+GG + DG ++E +++ LA+ +YID+EL + ++ K ++I S H+
Sbjct: 1235 HSQGGMFPDGKQHEYFELISLALRHACEYIDLELGWDDDLLSAVVQAK-GNSQIIASWHD 1293
Query: 146 YQYTPSVEDLSNLVARIQASG------ADIVKFATTALDITDVARV-FQITVHSQVPIIG 198
+ E S A+I A I+ ATT D + R +++ + P++
Sbjct: 1294 WSGRLDWE--SESTAKIYEKACRFGDIAKIIGKATTMEDNYSLERFRAKVSATATKPLLA 1351
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
+ MG G +SRI+ F +T + +APGQ + + + + D + F +
Sbjct: 1352 VNMGSVGQLSRIVNPVFTP-ITHEAMP--FKAAPGQLSFRQVQTALSLIGQA-DARRFAL 1407
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHL----LVDDIAKFFQTYSSNDFAGFSCTIPH 314
G P+GHS SP+L+N F ++G + L + D +A F + S DF G S TIPH
Sbjct: 1408 FGSPIGHSLSPLLHNTGFAALGLPHQYELLESTEINDAVAAFVR---SPDFGGASVTIPH 1464
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIR-RQSDG---KLFGYNTDYVGAISAIEDGLRGRLN 370
K +K DEV AK+IGAVN II R + G L G NTD++ AIE R L
Sbjct: 1465 KLNIIKLLDEVTDEAKTIGAVNTIIPIRDAQGVVTSLVGDNTDWI----AIETLARRSLR 1520
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-- 427
L G +VIGAGG+ +A + G R+++ NRT A +LA V
Sbjct: 1521 TVHLADPNLTG---LVIGAGGSARAALFALYRLGVKRILLFNRTLANAEKLAREVPPEWN 1577
Query: 428 ---ALSLADLENFNPED--GMILANTTSIGMQPKVDETP-----IPKHALGHYA--LVFD 475
SL ++ + + ++++N + G +D + +P L + A +V D
Sbjct: 1578 VSVLTSLDEVAQLSADQSPSVVVSNIPAEGS--TLDASSRGLIHLPTCMLRNPAGGVVID 1635
Query: 476 AVYTPKITRLLREAEE----------SGAT---------IVSGLEMFIGQAYEQYERFTG 516
Y P T LL+ A++ + AT V G+ + + Q Q+ R+TG
Sbjct: 1636 MSYKPHYTSLLQLAQQVNTNHELAIGTNATKAPTRKLWAAVPGITILLEQGCHQFHRWTG 1695
>gi|296121797|ref|YP_003629575.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014137|gb|ADG67376.1| 3-dehydroquinate dehydratase-like protein [Planctomyces limnophilus
DSM 3776]
Length = 485
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 224/501 (44%), Gaps = 39/501 (7%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+ + ES VD+ A A +DLVE+ LD L ++K LI+ S P L +
Sbjct: 1 MICISVTPESRQLAKVDILNA-ARQSDLVELCLDRLLK---EPDVKDLIESSKKPILVSC 56
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
R GG + G E+ER+ +LR A+ G Y++++ ++A+ K P KV
Sbjct: 57 RSAENGGSWKGTEDERIQLLRQAILAGPAYVELDEEIAK--------KIPRFGKV---QR 105
Query: 145 NYQYTPSVEDLSNLVARIQASG---ADIVKFATTALDITDVARVFQITVHSQ---VPIIG 198
YT L +L + +G AD++KF T D+ + A ++V SQ +P++G
Sbjct: 106 VISYTSMNRPLHDLEEAFENAGILQADVIKF-TWPTDLLEAAWPL-LSVVSQKRAIPVVG 163
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
L +G+ GL +L K+G + LE G+ + GQPT+ +L D+Y +RQ+GP T+ +
Sbjct: 164 LGLGKSGLTFSLLGRKYGSPWIYAALEKGMEAFVGQPTVSELDDVYRWRQIGPKTRFIAV 223
Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHL---LVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+G +G + + N F ++ N + + VD I K +
Sbjct: 224 VGFGLGETMLCKILNAGFDNLDLNTRCLPIEFRSVDSIPKMLDILKIPGVIATNYASRRV 283
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
DEV ++K A + I+R DG +N + A+ +E+ L GR +G
Sbjct: 284 FPIASAQDEVSAISK---AGDLYIKR-PDG-WASHNLIWKTALRLLEETL-GR---TGPD 334
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
L K +V+G GG +LA G K + V I + D +++A + L L
Sbjct: 335 DRPLDRKNVMVVGKGGLAASLAVGIKKRNGLVSICSADDDEGQQIATMADARFVPLGKLY 394
Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
+ + ++ + G + +T I + + D P + L+ EA GA
Sbjct: 395 DTLVDVLVVASENLDHGSR----KTSISPTIIRPGMTILDLSSMPADSPLIDEARVRGAK 450
Query: 496 IVSGLEMFIGQAYEQYERFTG 516
IV E+F A + TG
Sbjct: 451 IVEPAEVFADYATNLFRSITG 471
>gi|238489101|ref|XP_002375788.1| pentafunctional polypeptide (AroM), putative [Aspergillus flavus
NRRL3357]
gi|317137116|ref|XP_001727508.2| shikimate dehydrogenase [Aspergillus oryzae RIB40]
gi|327507654|sp|B8N4Q9.1|ARO1_ASPFN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|220698176|gb|EED54516.1| pentafunctional polypeptide (AroM), putative [Aspergillus flavus
NRRL3357]
gi|391869672|gb|EIT78867.1| pentafunctional AROM protein [Aspergillus oryzae 3.042]
Length = 1578
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 237/517 (45%), Gaps = 74/517 (14%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTL--IKES--------PVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D LK+ +I ++ + E +P +FT R +GG++ D +
Sbjct: 1074 GSDAVELRVDLLKDPASDSDIPSVDYVAEQMAFLRSYVSLPLIFTIRTKSQGGRFPDDAH 1133
Query: 99 ER-VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ +++ RLA G++++D+E+ E ++ K K+I S H+ + S ++S
Sbjct: 1134 DAAMELYRLAFRSGSEFVDLEIAFPDEMLRAVTEMK-GYSKIIASHHDPKGELSWANMSW 1192
Query: 158 LVARIQA-SGADIVKFATTA--LDITDVARVFQITVHS--QVPIIGLVMGERGLISRILC 212
+ +A DI+K A LD R F+ + P+I + MG+ G +SRIL
Sbjct: 1193 MKYYNRALEYGDIIKLVGVAKNLDDNTALRKFKSWAEEAHETPLIAINMGDNGQLSRIL- 1251
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + ++ MG K F + G PV S+SP+
Sbjct: 1252 ---NGFMTPVSHPSLPFKAAPGQLSATEIRK--GLSLMGEIKQKKFAVFGTPVSGSRSPV 1306
Query: 271 LYNEAFKSVGFNGVFVHLL---VDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
L+N F G + L V+D+ F + S DF G S TIP K + D +
Sbjct: 1307 LHNTLFSQAGLPHEYGRLETANVEDVKDFIR---SPDFGGASVTIPLKLDIMPLLDHITP 1363
Query: 328 VAKSIGAVNCIIRRQSDG----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
A+ IGAVN II +DG +L G NTD+ G ++ + GV +A
Sbjct: 1364 EAEIIGAVNTII-PVADGDKPARLVGSNTDWQGMTLSLHN---------AGVETANKDAS 1413
Query: 384 FVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDG 442
+VIG GG +A Y + G + + + R+ + + + T S +++ + +
Sbjct: 1414 ALVIGGGGTARAAIYALHSMGFSPIYVIGRSAPKLQSMVSTFP----SSYNIQVIDSPET 1469
Query: 443 MILANTTSIGMQP---KVDETPIPKHALGH-------------------YALVFDAVYTP 480
+ T +IG P +D P+ + L H + ++ + Y P
Sbjct: 1470 LKTIPTVAIGTIPADKPID--PVMRETLCHMFERAQEADADVVKTGEKAHRVLLEMAYKP 1527
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+T L++ A +S + GLE+ +GQ + Q++ +TG+
Sbjct: 1528 SVTALMQLASDSNWHTIPGLEVLVGQGWYQFKHWTGI 1564
>gi|409385048|ref|ZP_11237769.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
gi|399207426|emb|CCK18684.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
Length = 272
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 139/270 (51%), Gaps = 28/270 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ ++ P+ HS SP ++N AF VG NGV++ D+ ++ + D G +
Sbjct: 7 TKLAAVVANPIKHSLSPFIHNLAFDHVGENGVYLAFETPEADLGSVIESIKTLDMYGVNL 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+KEAAV DE+ VAK GA+N I+ R DGKLFG +TD G +++
Sbjct: 67 SMPYKEAAVPYMDELSEVAKLTGAINTIVNR--DGKLFGTSTDGAGFFKSLK-------- 116
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL 429
+ G VIGAGGA +++ A +GAR + + NRTY EL G+ +
Sbjct: 117 -----HFKVKGSTITVIGAGGAARSIIAEAAVQGARQITVYNRTYK--PELFTNYPGNIV 169
Query: 430 --SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH-ALGHYALVFDAVYTPKITRLL 486
L+DL G +L NTTS+GM PIP L LV D +Y P T LL
Sbjct: 170 FKPLSDLTELT---GDLLVNTTSLGMDGV--SLPIPMALQLPKDMLVADVIYQPIETPLL 224
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
A+ G + V+GL M + QA E ++ +TG
Sbjct: 225 TYAKSQGNSTVNGLGMLLYQAAESFKLWTG 254
>gi|303237314|ref|ZP_07323884.1| putative shikimate 5-dehydrogenase [Prevotella disiens FB035-09AN]
gi|302482701|gb|EFL45726.1| putative shikimate 5-dehydrogenase [Prevotella disiens FB035-09AN]
Length = 248
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 142/265 (53%), Gaps = 26/265 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F++ G + +++ + +IA + ++ + GF+ TIP+
Sbjct: 4 YGLIGYPLEHSFSKEYFNEKFQNEGIDAQYLNYEISNIADLMEIINTTPNLKGFNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVS 372
KE +K D + AK+IGAVN + K++ GYN+D +G +IE L
Sbjct: 64 KEQIIKYLDALSPEAKAIGAVNVVKVEHHGNKVYLKGYNSDVIGFTKSIEPLLERY---- 119
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA++YG + G I + R + +A + + +S
Sbjct: 120 --------HKKALILGTGGAAKAISYGLASLG----IETKYVSRRKNIA-GLTYNDISPK 166
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDE-TPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ FN ++ N T +GM P V+E P+P A+ + L++D +Y P +T+ + + E
Sbjct: 167 IINEFN-----VIVNCTPVGMYPNVEEYLPLPYEAMDSHTLLYDLLYNPDVTQFMAKGAE 221
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
+GA + +GLEM + QA+E ++ + G
Sbjct: 222 NGAVVKNGLEMLLLQAFESWDIWNG 246
>gi|311069169|ref|YP_003974092.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|419820181|ref|ZP_14343794.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
gi|310869686|gb|ADP33161.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|388475693|gb|EIM12403.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
Length = 280
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+++G+IG P+GHS SP ++N A K +G +G + V D++ + + G + T
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDLGLDGHYHAFQVENDNLKDAVKGIKALGMIGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK A ++ D +D AK +GAVN + R L GYNTD G + ++ L
Sbjct: 63 VPHKVAIMEHLDHIDESAKVLGAVNTV--RTEGDMLVGYNTDGEGFVKSLRKIL------ 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETV----GG 426
+ ++IGAGGA +A+ + R I NRT ++A +L ++
Sbjct: 115 ----DKPVQDLSILMIGAGGAARAIFTTIVRENPKRFDICNRTLEKAEQLIQSSPSFQNK 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
L++ + E N E ++ +TTSIGM P +D PI + A+V D VY P T LL
Sbjct: 171 QVLTIKEAEE-NLERYDVIIHTTSIGMYPDIDAVPISLQRAANRAIVCDIVYNPIRTALL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
++AE+ G + G+ MF+ QA ++ +TG
Sbjct: 230 KQAEQKGLRTLDGVGMFVEQAALSFQLWTG 259
>gi|322420004|ref|YP_004199227.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
gi|320126391|gb|ADW13951.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
Length = 290
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 147/278 (52%), Gaps = 30/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T V GIIG PV HS SP+L+N AFK++G + ++V + + +A+ + AGFS
Sbjct: 7 TTVTGIIGWPVSHSLSPVLHNAAFKALGLDWIYVPFPIAPERLAEGICGLKAIGVAGFSV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK A + DEV A+ IGAVN ++ + G+L GYNTD +G I+A L +L+
Sbjct: 67 TIPHKVAIIPLLDEVTPEAELIGAVNTVVAKH--GRLTGYNTDGIGLIAA----LAAKLD 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTYDRARELAETVGG--- 426
GK +V+GAGGA + A+ A A ARV IANR+ A LA+ V G
Sbjct: 121 CD------PKGKSVLVLGAGGAARSAVVSLAGAGAARVEIANRSLAAATALADLVEGRLP 174
Query: 427 ------HALS-LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVY 478
LS L+D D ++ NTTS+GM D P + AL A ++D VY
Sbjct: 175 QTSFAARPLSVLSDAGFLGSFD--LVVNTTSVGMA--GDSFPGLSLKALKSGACIYDMVY 230
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P +T LL +AE G +GL M + Q + +TG
Sbjct: 231 APPVTPLLAQAEALGIPCANGLGMLVAQGEAAFRIWTG 268
>gi|425058431|ref|ZP_18461812.1| shikimate dehydrogenase [Enterococcus faecium 504]
gi|403038372|gb|EJY49588.1| shikimate dehydrogenase [Enterococcus faecium 504]
Length = 284
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 149/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++A N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVAYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|257388971|ref|YP_003178744.1| shikimate 5-dehydrogenase [Halomicrobium mukohataei DSM 12286]
gi|257171278|gb|ACV49037.1| shikimate 5-dehydrogenase [Halomicrobium mukohataei DSM 12286]
Length = 265
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 141/271 (52%), Gaps = 19/271 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFA--GFSCT 311
VFG+IG PVGHS SP ++ A++ + + +V D+ A S+ G + T
Sbjct: 2 DVFGLIGNPVGHSLSPPMHEAAYEQLDMDARYVTFEPDEDAAAAAIESARTLGITGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+AA + D D +A+ IGAVN + + + GYNTD VGA+ A+ R +V
Sbjct: 62 IPFKQAAFEAVDP-DPLARRIGAVNTVDLTGDEPR--GYNTDAVGAVRALR-----RHDV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ ++ + G +A+A+G +G V IANRT +RA +LA V G
Sbjct: 114 ALDGTAVVVGAGGAG-------RAVAFGLADEGMSVRIANRTVERAHDLAADVPGATGHG 166
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
D + D +L N TS+GM D TP+P AL V DAVY+P TRLLR+A
Sbjct: 167 LDELHDTVADADVLVNCTSVGMDE--DATPVPADALHGDLSVLDAVYSPIETRLLRDAAA 224
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
+G T V G M + Q E +ER+TGL ++
Sbjct: 225 AGGTTVDGAWMLLFQGVEAFERWTGLDAPVD 255
>gi|169344492|ref|ZP_02865461.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
gi|169297412|gb|EDS79521.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
Length = 271
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPDIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE + E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|15618943|ref|NP_225229.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae CWL029]
gi|15836566|ref|NP_301090.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae J138]
gi|16751990|ref|NP_445356.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae AR39]
gi|161484681|ref|NP_877347.2| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae TW-183]
gi|9087140|sp|Q9Z6M4.1|ARODE_CHLPN RecName: Full=Shikimate biosynthesis protein AroDE; Includes:
RecName: Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; AltName: Full=Type I DHQase;
Includes: RecName: Full=Shikimate dehydrogenase
gi|4377368|gb|AAD19172.1| Shikimate 5-Dehyrogenase [Chlamydophila pneumoniae CWL029]
gi|7189731|gb|AAF38612.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pneumoniae AR39]
gi|8979408|dbj|BAA99242.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae J138]
Length = 477
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 209/463 (45%), Gaps = 40/463 (8%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
D++E+RLD + + +E + TLI + P L T+R + + L +L
Sbjct: 26 DIIELRLDLINELDDQE-LHTLITTAQNPIL-TFR-----QHKEMSTALWIQKLYSLAKL 78
Query: 111 GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170
++D+++ + + +IR P K K+I+S H T EDL + + A+ A+I
Sbjct: 79 EPKWMDIDVSLPKTALQTIRKSHP-KIKLILSYH----TDKNEDLDAIYNEMLATPAEIY 133
Query: 171 KFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVS 230
K + + ++ + P L MG GL SR+L + + +
Sbjct: 134 KIVLSPENSSEALNYIKKARLLPKPSTVLCMGTHGLPSRVLSPLISNAMNYAAGISAPQV 193
Query: 231 APGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV 290
APGQP +++LL YN+ ++ + ++G+IG PV S S + +N + N ++ V
Sbjct: 194 APGQPKLEELLS-YNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLSLNATYIKFPV 252
Query: 291 D--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF 348
++ FF F+G S T+P K A D +D A+ ++N ++ R + K+
Sbjct: 253 TIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTLVFR--NQKIL 310
Query: 349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV 408
GYNTD G ++ N+S + K ++GAGGA KA+A +GA +
Sbjct: 311 GYNTDGEGVAKLLKQK-----NIS------VNNKHIAIVGAGGAAKAIAATLAMQGANLH 359
Query: 409 IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 468
I NRT A LA G A L LENF D I+ N + P+V
Sbjct: 360 IFNRTLSSAAALATCCKGKAYPLGSLENFKTID--IIINC----LPPEV------TFPWR 407
Query: 469 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
+V D P + L A++ G+ I+ G EMFI QA Q+
Sbjct: 408 FPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQF 450
>gi|15606233|ref|NP_213611.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
gi|9087118|sp|O67049.1|AROE_AQUAE RecName: Full=Shikimate dehydrogenase
gi|2983425|gb|AAC07007.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
Length = 269
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 147/274 (53%), Gaps = 29/274 (10%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
+ T+++G+IG PV HS SP+ N + G N V++ + +++ K F+ + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+P KE + D V+ AK IGAVN + + +GK +GYNTD++G + +++
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 115
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
+ + K +V+GAGGA +A+ Y +GA+V + NRT ++A +LA+
Sbjct: 116 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 168
Query: 427 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
++ +PE+ + ++ NTTS+G++ K D + +V D +Y K
Sbjct: 169 EVVN-------SPEEVIDKVQVIVNTTSVGLKDK-DPEIFNYDLIKKDHVVVDIIY--KE 218
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+LL++A+E GA + GL M + Q E ++ + G
Sbjct: 219 TKLLKKAKEKGAKLFDGLPMLLWQGIEAFKIWNG 252
>gi|346319592|gb|EGX89193.1| pentafunctional AROM polypeptide [Cordyceps militaris CM01]
Length = 1546
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 219/504 (43%), Gaps = 74/504 (14%)
Query: 49 GADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL- 104
G+D VE+R+D L + + E + L + + +P +FT R +GG + D E + L
Sbjct: 1071 GSDAVELRVDLLNSQDLDFVTEQVSILRQYTGLPIIFTVRTASQGGSFPDDATEALLALY 1130
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
L ++LG++Y+DVE+ A E +S+ + K+I S H+ + S + S + +A
Sbjct: 1131 HLGLQLGSEYLDVEITTADEILESVSSAR-GHTKLIASHHDPRGALSWRNASWIEHYNRA 1189
Query: 165 -SGADIVKFATTALDITD---VARVFQITVHSQ-VPIIGLVMGERGLISRILCAKFGGFL 219
DIVK A + D + R T Q PII + MG G +SR+L GFL
Sbjct: 1190 LQYGDIVKLVGLAHKVEDNFDLVRFKSRTTSEQGPPIIAINMGTVGQLSRVL----NGFL 1245
Query: 220 T-FGTLENGIVSAPGQPT---IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEA 275
T +APGQ + I+ L L Q+ + + F + GKP+ S+SP L+N
Sbjct: 1246 TPVSHPALPFKAAPGQLSAAEIRQALTLVG--QL--EARNFYLFGKPISQSRSPALHNGL 1301
Query: 276 FKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAV 335
F G + L D+ F G S TIP K + DE+ A+ IGAV
Sbjct: 1302 FDQCGLPHQYRLLETDNAIDVRPALRDPSFGGASVTIPLKLDIIGELDELTEAARIIGAV 1361
Query: 336 NCIIRRQS---DGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG 390
N +I S DG L G NTD+ G + A+ + GG+ + +VIG+G
Sbjct: 1362 NTVIPLSSSVGDGTQHLLGDNTDWKGIVHALRN---------GGIGEVTSNSTAMVIGSG 1412
Query: 391 GAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANT- 448
G +A + G R+ + RT + +ADL P+D + A T
Sbjct: 1413 GTTRAAVFALHTLGFGRIYVVGRTAKNVEAM----------IADL----PDDYNLQAVTD 1458
Query: 449 -TSIGMQPKVDETPIP--------------------KHALGHYALVFDAVYTPKITRLLR 487
+I + P V + IP AL L D Y P+ T ++
Sbjct: 1459 AATIAVLPNVIISTIPGDKPIDPMTEKVISAVVNASATALQQRVL-LDMAYKPRATPAVK 1517
Query: 488 EAEESGATIVSGLEMFIGQAYEQY 511
AE +G + GLE+ Q + Q+
Sbjct: 1518 IAESAGWPTIPGLEVLASQGWYQF 1541
>gi|448344727|ref|ZP_21533630.1| shikimate 5-dehydrogenase [Natrinema altunense JCM 12890]
gi|445637295|gb|ELY90449.1| shikimate 5-dehydrogenase [Natrinema altunense JCM 12890]
Length = 267
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 147/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A++ +G + DDI + + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEELGLEARYATFEPEEDDIGDAIRGADALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+A ++ D +A IGAVN I S G GYNTD VGA+ A+ +
Sbjct: 62 IPFKQAVLEIVAPED-LATRIGAVNTIDFAGS-GPPTGYNTDAVGALRALREH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
AL G+ VV+GAGGAG+A+A+G GA V +ANRT +AR+LA V GH
Sbjct: 113 ----DVALEGEQAVVVGAGGAGRAIAFGLADAGATVAVANRTESKARDLAAAVPRATGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE D +L N TS+GM D TP+P+ AL V DAVY+P TRLLR+
Sbjct: 168 -GLAALEELL-ADADVLVNATSVGMD--ADATPVPEDALHGGLAVLDAVYSPLETRLLRD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A ++GAT V G M + Q E +E +TG
Sbjct: 224 AADAGATTVDGAWMLLYQGVEAFEIWTG 251
>gi|431071468|ref|ZP_19494439.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|431104340|ref|ZP_19497064.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|431582328|ref|ZP_19520277.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|431740200|ref|ZP_19529117.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
gi|430567101|gb|ELB06187.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|430569928|gb|ELB08907.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|430594218|gb|ELB32188.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|430603736|gb|ELB41249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
Length = 284
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 28/275 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA+ ++ N+T+ + +E E +
Sbjct: 118 ---GIS--VKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F D + +L N T IGM K+D++P+ + H L VFD +
Sbjct: 173 RTSCKVKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYE 512
Y P+ TRLL+EA++ GA +GL M I Q +E
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFE 267
>gi|119495188|ref|XP_001264384.1| pentafunctional polypeptide (AroM), putative [Neosartorya fischeri
NRRL 181]
gi|327507664|sp|A1D244.1|ARO1_NEOFI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|119412546|gb|EAW22487.1| pentafunctional polypeptide (AroM), putative [Neosartorya fischeri
NRRL 181]
Length = 1578
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 231/515 (44%), Gaps = 69/515 (13%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT----------LIKESPVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L++ + I T L +P +FT R +GG++ D +
Sbjct: 1074 GSDAVELRVDLLEDPDSANGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAH 1133
Query: 99 -ERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
E + + RLA+ G +++D+E+ E ++ K K+I S H+ + S ++S
Sbjct: 1134 AEAMQLYRLAVRSGCEFVDLEIAFPDEMLRAVTEMK-GYSKIITSHHDPKGELSWANMSW 1192
Query: 158 LVARIQA-SGADIVKFATTALDITD--VARVFQITVHS--QVPIIGLVMGERGLISRILC 212
+ +A D++K A ++ D R F+ VP+I + MG G +SRIL
Sbjct: 1193 MKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRIL- 1251
Query: 213 AKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T +APGQ + D+ + MG K F + G P+ S+SP
Sbjct: 1252 ---NGFMTPVSHPALPFRAAPGQLSATDIRKGLSL--MGEIKKKRFALFGSPISESRSPA 1306
Query: 271 LYNEAFKSVGFNGVFVHLL---VDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
L+N F +G + L V+D+ F + + DF G S TIP K + DE+
Sbjct: 1307 LHNTLFAEMGLPHEYTRLETANVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEITA 1363
Query: 328 VAKSIGAVNCIIRRQSDG-----KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
A+ IGAVN ++ SDG +L G+NTD+ G + + + G G S
Sbjct: 1364 EAEIIGAVNTVV-PVSDGEGKPQRLVGHNTDWQGMVQCLRNA--GAYGADGNASG----- 1415
Query: 383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD----LEN 436
+V+G GG +A Y G + + I R + + T G+ + + + LE+
Sbjct: 1416 --LVVGGGGTSRAAIYALHHMGFSPIYIVGRNPAKLESMVATFPTGYNIRIVEGNEKLEH 1473
Query: 437 FN-------PED-----GM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
P D GM IL + + D + G ++ + Y P++
Sbjct: 1474 VPHVAIGTIPADRPIDPGMREILCHMFERAQEADADAA---RTIEGSPRVLLEMAYKPRV 1530
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T L++ A ++G T V GLE IGQ Q++ +TG+
Sbjct: 1531 TALMQLAVDAGWTTVPGLEALIGQGVHQFQHWTGI 1565
>gi|168217169|ref|ZP_02642794.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
gi|182380759|gb|EDT78238.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
Length = 271
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE + E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|374328665|ref|YP_005078849.1| shikimate dehydrogenase [Pseudovibrio sp. FO-BEG1]
gi|359341453|gb|AEV34827.1| Shikimate dehydrogenase [Pseudovibrio sp. FO-BEG1]
Length = 277
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 148/268 (55%), Gaps = 23/268 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+GHSKSP+++ K G G ++ V + F+ + + + F G + TIP+K
Sbjct: 6 VTGHPIGHSKSPLIHGYWLKQHGIEGSYIAQDVPPETAEGFYGSLAEHGFVGCNVTIPNK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A +++D AK IGAVN + ++ G L G NTD +G + ++ L N
Sbjct: 66 EHAYNSAEKLDDAAKMIGAVNTLWLDEA-GVLNGSNTDGLGFLGNLDQMLPNWDN----- 119
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLA-D 433
G +V+GAGGA +A+ + ++G V IANRT ++A++LA+ G + +++A D
Sbjct: 120 ----NGNKAIVLGAGGASRAIIWALLSRGYTEVYIANRTLEKAQKLADHFGPNTIAIAWD 175
Query: 434 L--ENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
E F D +L NTTS+GM QP+++ + L A+V D VY+P T+LLR++
Sbjct: 176 TLGEKFGEVD--LLVNTTSLGMTGQPELN---VDLDNLSKSAVVTDIVYSPLQTKLLRDS 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
E G V GL M + QA +E++ G+
Sbjct: 231 AERGNPTVDGLGMLLHQAVPGFEKWFGV 258
>gi|333910218|ref|YP_004483951.1| 3-dehydroquinate dehydratase [Methanotorris igneus Kol 5]
gi|333750807|gb|AEF95886.1| 3-dehydroquinate dehydratase [Methanotorris igneus Kol 5]
Length = 218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 126/227 (55%), Gaps = 16/227 (7%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+PI+ ++D + + KA AD+VE R+D L + N I+ ++K P + T
Sbjct: 1 MICIPIVDNNIDDALKNAEKA-LKEADIVEFRVDMLDDVNES-AIEEMVK---YPCIITV 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR-----EFNDSIRGKKPEKCKV 139
R WEGG + +ER+++++ A+E A ++D+EL+ + +F D I K K+
Sbjct: 56 RADWEGGFWKKSNDERINLIKKAIECNAKFVDIELKEEKNKELVKFRDEIGSK----TKI 111
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGL 199
I+S H+++ TPS E+L +V + DI KFA A DV +V + IIG+
Sbjct: 112 IISYHDFEKTPSCEELIKIVEE-ELKIGDIAKFAVMAKSKEDVLKVLNVINKYNGKIIGI 170
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
MGE G ++RIL FG LTF ++E G SAPGQ +K L +++
Sbjct: 171 AMGEEGKLTRILGVHFGSILTFASME-GKASAPGQIDVKKLKEIWKL 216
>gi|168213889|ref|ZP_02639514.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
gi|170714608|gb|EDT26790.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
Length = 271
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++N+
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++A + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE + E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|300711893|ref|YP_003737707.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448295583|ref|ZP_21485647.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299125576|gb|ADJ15915.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445583682|gb|ELY38011.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 273
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 146/274 (53%), Gaps = 25/274 (9%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTI 312
V+G++G PVGHS SP ++ A++ +G + +V D + S+ G + TI
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYRELGMDARYVTFEPDPESLEAAISGASALGIKGLNVTI 62
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P K+ + E+D +A IGAVN I G GYNTD GA A+E R +V
Sbjct: 63 PFKQEVLTLV-ELDDLADRIGAVNTI---DLTGTPTGYNTDAAGARRALE-----RHDVD 113
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHAL 429
L G V+IGAGGA +A+A+ +GA + IANRT +RA ELA V GH L
Sbjct: 114 ------LDGARAVLIGAGGAARAIAFVLADEGATIQIANRTKERAEELATAVPQTTGHGL 167
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
DL + E+ +L N TS+GM+ D +P+P +L + V D VY P TRLLR+A
Sbjct: 168 P--DLPDLL-ENADVLINATSVGME--TDTSPVPAESLHRHLTVMDVVYRPLETRLLRDA 222
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+++GA V G M + Q E ER+TG + A
Sbjct: 223 KQTGAETVDGGWMLLYQGVEALERWTGREAPVEA 256
>gi|384449779|ref|YP_005662381.1| shikimate dehydrogenase [Chlamydophila pneumoniae LPCoLN]
gi|269302837|gb|ACZ32937.1| shikimate dehydrogenase family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 477
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 209/463 (45%), Gaps = 40/463 (8%)
Query: 51 DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
D++E+RLD + + +E + TLI + P L T+R + + L +L
Sbjct: 26 DIIELRLDLINELDDQE-LHTLITTAQNPIL-TFR-----QHKEMSTALWIQKLYSLAKL 78
Query: 111 GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170
++D+++ + + +IR P K K+I+S H T EDL + + A+ A+I
Sbjct: 79 EPKWMDIDVSLPKTALQTIRKSHP-KIKLILSYH----TDKNEDLDAIYNEMLATPAEIY 133
Query: 171 KFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVS 230
K + + ++ + P L MG GL SR+L + + +
Sbjct: 134 KIVLSPENSSEALNYIKKARLLPKPSTVLCMGTHGLPSRVLSPLISNAMNYAAGISAPQV 193
Query: 231 APGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV 290
APGQP +++LL YN+ ++ + ++G+IG PV S S + +N + N ++ V
Sbjct: 194 APGQPKLEELLS-YNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLSLNATYIKFPV 252
Query: 291 D--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF 348
++ FF F+G S T+P K A D +D A+ ++N ++ R + K+
Sbjct: 253 TIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTLVFR--NQKIL 310
Query: 349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV 408
GYNTD G ++ N+S + K ++GAGGA KA+A +GA +
Sbjct: 311 GYNTDGEGVAKLLKQK-----NIS------VNNKHIAIVGAGGAAKAIAATLAMQGATLH 359
Query: 409 IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 468
I NRT A LA G A L LENF D I+ N + P+V
Sbjct: 360 IFNRTLSSAAALATCCKGKAYPLGSLENFKTID--IIINC----LPPEV------TFPWR 407
Query: 469 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
+V D P + L A++ G+ I+ G EMFI QA Q+
Sbjct: 408 FPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQF 450
>gi|20093378|ref|NP_619453.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
gi|24211500|sp|Q8THC3.1|AROE_METAC RecName: Full=Shikimate dehydrogenase
gi|19918745|gb|AAM07933.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
Length = 280
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 143/274 (52%), Gaps = 23/274 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+VFG+ G PVGHS SP ++N AF ++G + ++ V +++ K + F G + T
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 312 IPHKEAAVKC-CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
+P KE A+K D +A+ IGAVN ++ ++ G++ GYNTD +GA A+ L +
Sbjct: 63 VPLKEEALKLDFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQAL---LEAAVE 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL- 429
+ G +A+A+ A GA + + NRT +RA ELA+ V +L
Sbjct: 119 IRGSKVVVAGAGGAA--------RAVAFQLAADGAEITVVNRTEERAVELAKDVAAASLP 170
Query: 430 ------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
L+ L+ D IL NTT++GM P D T L VFD VY P T
Sbjct: 171 GKINGTGLSGLKEL-LRDADILINTTTLGMHPNTDTTIATAEELHSGLTVFDIVYNPLET 229
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
RLL+EA+ +GA VSG+ M + Q E ++ +TG+
Sbjct: 230 RLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGV 263
>gi|257887461|ref|ZP_05667114.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|293377413|ref|ZP_06623615.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|293570466|ref|ZP_06681521.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|424763558|ref|ZP_18191028.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430841215|ref|ZP_19459134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|431035007|ref|ZP_19491884.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|431737780|ref|ZP_19526732.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|431751761|ref|ZP_19540448.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|431756603|ref|ZP_19545235.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|431761855|ref|ZP_19550417.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
gi|257823515|gb|EEV50447.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|291609412|gb|EFF38679.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|292643931|gb|EFF62039.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|402422669|gb|EJV54899.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430493991|gb|ELA70241.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|430563722|gb|ELB02931.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|430598386|gb|ELB36127.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|430615055|gb|ELB52025.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|430620457|gb|ELB57259.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|430624547|gb|ELB61197.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
Length = 284
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA+ ++ N+T+ + +E E +
Sbjct: 118 ---GIS--VKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K+D++P+ + H L VFD +
Sbjct: 173 RTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|182680472|ref|YP_001834618.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636355|gb|ACB97129.1| shikimate 5-dehydrogenase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 284
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDF 305
Q P KV +IG P+ HS+SP+++N + G G + + + + +A F + F
Sbjct: 6 QDNPGPKVC-VIGYPIKHSRSPLIHNYWLQRYGIAGSYEKIEVAPEHLADFLRDLGGKGF 64
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE A CDEV A+ +GAVN + R DG+L G+NTD G + A++ +
Sbjct: 65 VGANVTLPHKETAFALCDEVSEEARQLGAVNTLFLR--DGRLHGHNTDGEGFLGALDQEV 122
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
G V+IGAGGA +AL + +GA + + NRT R+ E+A
Sbjct: 123 PAWDKDLGKA---------VIIGAGGAARALVFALLRRGAGEIALVNRTLARSEEIAMQG 173
Query: 425 GGH--ALSLADLENFNPEDGMILANTTSIGMQPK----VDETPIPKHALGHYALVFDAVY 478
GG S ADL + + +L N TS+GM + +D +P+P A+V D VY
Sbjct: 174 GGRITCHSYADLPDVL-KTADLLVNATSLGMAGQEPLVIDLSPLPAK-----AIVDDIVY 227
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T LLR+A G V GL M + QA + + G
Sbjct: 228 VPLETDLLRQARLRGLRRVGGLGMLLHQAVPGFRLWFG 265
>gi|423084552|ref|ZP_17073052.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
gi|357552122|gb|EHJ33897.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
Length = 287
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 142/281 (50%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +FK + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + +++
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKEN------ 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT----YDRARELAETVGG 426
GV + GK ++GAGGA A+ GAR + T Y RA + E +
Sbjct: 119 ---GVE--VKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRAEQTVENIKK 173
Query: 427 HA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
++L DLE+ N E IL N T IGM+P +ET I ++ LV D
Sbjct: 174 DVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDV 233
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 234 VYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGL 274
>gi|302900452|ref|XP_003048265.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|327507663|sp|C7YZ74.1|ARO1_NECH7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|256729198|gb|EEU42552.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1569
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 234/503 (46%), Gaps = 53/503 (10%)
Query: 49 GADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D VE+R+D L++ + + L + P +FT R + +GG++ D E +++
Sbjct: 1072 GSDAVELRVDLLQDRSVDSVTRQVSILRALAKKPIVFTLRTVSQGGKFPDEAYEEGLELY 1131
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
RLA+ +G +Y+DVE+ + ++ + ++I S H+ Q T S ++ S + +A
Sbjct: 1132 RLALRMGMEYVDVEMTLPENIIQTVTESRGH-SRIIASHHDPQGTMSWKNASWIPFYNRA 1190
Query: 165 -SGADIVKF---ATTALDITDVARVFQITVHSQ-VPIIGLVMGERGLISRILCAKFGGFL 219
DI+K A ++ D D+A+ +Q P+I + MG+ G +SR+L KF +
Sbjct: 1191 LQFGDIIKLVGVARSSEDNFDLAKFKSRMQEAQKTPMIAMNMGKAGKLSRVL-NKFLTPV 1249
Query: 220 TFGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKS 278
+ L +APGQ + ++ L + P F + GKP+ S+SP L+N F
Sbjct: 1250 SHPALP--FKAAPGQMSAAEIRRGLALLGDLDPCN--FYLFGKPISASRSPALHNTLFGQ 1305
Query: 279 VGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI 338
G + L D+I + + DF G S TIP K + DE+ A++IGAVN +
Sbjct: 1306 TGLPHQYHRLETDNIQDVREVLQAPDFGGASVTIPLKLDVMGQVDELSEAARTIGAVNTV 1365
Query: 339 I---------RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA 389
+ RR +L G NTD+ G + A+ D V S G VV G+
Sbjct: 1366 VPIGKADASDRR----RLLGDNTDWRGMVHALRDE-----GVEEQADSETKGAAMVV-GS 1415
Query: 390 GGAGKALAYGAKAKG-ARVVIANRTYDRARELA-------ETVGGHALSLADL--ENFNP 439
GG +A + + G + IA R + LA + G S AD N N
Sbjct: 1416 GGTTRAAIFALHSLGFGPIYIAARNQAKVDALAADFPAEYQLQGLSQPSDADKVSSNLNV 1475
Query: 440 EDGMILANTTSIGMQPKVDE---TPIPKHALG-HYALVFDAVYTPKITRLLREAEESGA- 494
I A+ + P + E + + A+G ++ + Y P T +++ A+E+G
Sbjct: 1476 VISTIPADRP---IDPSLQELVGALLSRPAVGTERRVLLEMAYKPSHTPIMQLADEAGNW 1532
Query: 495 TIVSGLEMFIGQAYEQYERFTGL 517
T V GLE+ Q + Q+E +TG+
Sbjct: 1533 TTVPGLEVLASQGWYQFELWTGI 1555
>gi|164688575|ref|ZP_02212603.1| hypothetical protein CLOBAR_02220 [Clostridium bartlettii DSM
16795]
gi|164602988|gb|EDQ96453.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 288
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 150/299 (50%), Gaps = 44/299 (14%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TKV+ +IG PV S SP ++N F+ + V+V V D + + + G +
Sbjct: 8 TKVYSVIGHPVSQSFSPKIHNYLFEKYDIDAVYVSYDVNPDRVKEGIEGIRHLGIMGTNV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D AK GAVN I + DGKL+GYNTD G +I D
Sbjct: 68 TIPHKIEVMKYLDEIDKKAKLFGAVNTI--KNVDGKLYGYNTDGTGLTKSIRDS------ 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGH-- 427
SG + GK ++IGAGGA +++A A + A + I NR+ ++A+ +A+T+ H
Sbjct: 120 -SG---EDIKGKKVLIIGAGGACRSIAIQLAIEEAASIEIVNRSIEKAQIIADTINSHFE 175
Query: 428 --------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPI------PKHALGHYALV 473
++ D++N + IL NTT IGM DE+PI PK+ +V
Sbjct: 176 TKAIASSKTITQDDIDNVD-----ILINTTPIGMG--TDESPIDTSLVPPKN-----MIV 223
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL-PGKMNAPHLYKFFV 531
DAVY P T L++ + I G++M I Q + +TG+ P + ++ K F+
Sbjct: 224 ADAVYKPHETALIKWGLKYNLKIAYGIQMLINQGIHSFSIWTGINPTLEDTENILKIFL 282
>gi|149248983|ref|XP_001528832.1| pentafunctional AROM polypeptide [Lodderomyces elongisporus NRRL
YB-4239]
gi|327507642|sp|A5H2Q8.1|ARO11_LODEL RecName: Full=Pentafunctional AROM polypeptide 1; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|146453336|gb|EDK47592.1| pentafunctional AROM polypeptide [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1551
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 237/500 (47%), Gaps = 60/500 (12%)
Query: 50 ADLVEIRLDGLKNFNPR---ENIKTLIK-ESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
++ VE+R+D L N E I L + +P L+T R + GQY D DE +L
Sbjct: 1064 SNAVELRVDLLANQETAYIAEQIGLLRSVATDLPILYTVRTKSQCGQYPDEDEEGMRKLL 1123
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVARI 162
+++G D ID++L + + K+ K+I S H++ +++ N A+
Sbjct: 1124 MFGLKMGVDIIDLQLISSPSTIAEVISKRGH-TKIIASHHDFTGDLKWDNVEWKNKYAQG 1182
Query: 163 QASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+ AD VK A D + F+ +++ P+IG+ MG +G +SR+L LT
Sbjct: 1183 VSIDADFVKLVGMAKTFDDNLLLENFR-RQNTEKPLIGINMGPQGKLSRVL----NKVLT 1237
Query: 221 FGTLENGIVSAP---GQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
T E I P GQ ++K++ + F+ G K F ++G PV HS+SP L+N A+
Sbjct: 1238 PVTHEL-ITDKPIGVGQLSLKEI-NQALFQIGGLLEKEFWVVGSPVSHSRSPALHNAAYA 1295
Query: 278 SVGFNGVFVHLLVDDIAKFF-QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
++G F DD K + Q F G + TIP K K C E+ AK IGAVN
Sbjct: 1296 ALGLPYKFDIFETDDAEKVYSQLMQKPTFGGLAVTIPLKLDIKKYCTELSESAKLIGAVN 1355
Query: 337 CIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
+ +DG+ G NTD++G ++ + + ++ GVS+ L V+G GG +
Sbjct: 1356 TVT-PIADGRKGFLGDNTDWIGIANSFK---KADFALASGVSNGL------VVGGGGTSR 1405
Query: 395 ALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453
A + + G ++ + NRT + ++L ++ + L + +N A++ SIG+
Sbjct: 1406 AAIFALHSLGCQKIYLLNRTESKLQDLVDSFPDYDLEILLEKN---------ASSVSIGL 1456
Query: 454 -------QPKVDETPIPK--HALGH-------YALVFDAVYTPKITRLLREAEES-GATI 496
+DET + K L + L+ +A Y P++T ++ A+E T+
Sbjct: 1457 VVSCVPGDKPLDETLMKKLDGVLSNNKGDKQTRPLLLEAAYKPRVTPIMELAKEKYDWTV 1516
Query: 497 VSGLEMFIGQAYEQYERFTG 516
+ G+EM + Q Q++ TG
Sbjct: 1517 IPGVEMLVNQGEAQFKLHTG 1536
>gi|307565620|ref|ZP_07628098.1| putative shikimate 5-dehydrogenase [Prevotella amnii CRIS 21A-A]
gi|307345652|gb|EFN91011.1| putative shikimate 5-dehydrogenase [Prevotella amnii CRIS 21A-A]
Length = 249
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 25/261 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE FK+ G N +++ + I ++ ++N + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFKNEGINAKYINFEIPTIDNLYEILATNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + DE+ AK+IGAVN I K L G+N+D +G +I L + +
Sbjct: 64 KEQVIPYIDELSPEAKAIGAVNVIRITHKGNKTILKGFNSDVIGFTRSISPLLMTQWH-- 121
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ YG K+ G + +RT + V +
Sbjct: 122 ---------KKALILGTGGAAKAVNYGLKSLGLETLFVSRTPSSGEISYDDVTPELIRFY 172
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ ++ N T +GM PKVD P +P A+ + L++D +Y P T +++ E
Sbjct: 173 N----------VIINCTPLGMYPKVDTYPKLPYDAMNNKTLLYDLIYNPDHTLFMKKGAE 222
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
GATI +GLEM + QA+ ++
Sbjct: 223 HGATIKNGLEMLLLQAFVSWD 243
>gi|298293764|ref|YP_003695703.1| shikimate 5-dehydrogenase [Starkeya novella DSM 506]
gi|296930275|gb|ADH91084.1| shikimate 5-dehydrogenase [Starkeya novella DSM 506]
Length = 281
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSC 310
T+ +IG PV HS+SP+++ K G +G + + ++ FF ++ + G +
Sbjct: 2 TRHAAVIGHPVAHSRSPLIHGYWLKKHGIDGTYGLRDVAPEEADTFFANFADSGLVGCNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKEAA + E D VA+++GA N + G+L G NTD G ++ ++
Sbjct: 62 TVPHKEAAFRALAEADQVARALGAANTLW--LEGGRLCGGNTDVYGFLANLDAAEPDWTR 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
G VV+GAGGA +A+ Y ++G RVV+ANRT RA L E G L
Sbjct: 120 ALGEA---------VVLGAGGASRAIVYALLSRGIDRVVVANRTLARAEALREKFGPRVL 170
Query: 430 SLADLENFNPEDGM-ILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ + +G +L NTTS+ M QP +D I AL ALV D VY P T LL
Sbjct: 171 PVDWRDLAGRLNGCRLLVNTTSLSMKGQPPLD---IELTALSPDALVTDIVYVPLETPLL 227
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ A+ G V GL M + QA +ER+ G+
Sbjct: 228 KAAKARGLATVDGLGMLLHQAVPGFERWFGV 258
>gi|440635900|gb|ELR05819.1| hypothetical protein GMDG_01896 [Geomyces destructans 20631-21]
Length = 984
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 226/505 (44%), Gaps = 64/505 (12%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTL--IKES--------PVPTLFTYRPIWEGGQYDGDEN 98
G+D VE+R+D L + + I TL + E +P +FT R + +GG++ D +
Sbjct: 494 GSDAVELRVDLLVDPASEDGIPTLDFVYEQVSLLRSAISLPLIFTIRTVGQGGRFPNDAH 553
Query: 99 ERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVED--L 155
+ L + A+ + +YIDVE+Q E ++ K K+I S H+ T S ++
Sbjct: 554 SQALALYKAAIRMAIEYIDVEIQFPTELLHTVCSNK-GLSKIIASHHDPSGTLSWKNAGW 612
Query: 156 SNLVARIQASGADIVKFATTALDITD---VARVFQITVHSQVPIIGLVMGERGLISRILC 212
+ R G DI+K A + D +A+ F+ + + P+I + MG +G +SR+L
Sbjct: 613 AQYYNRALEYG-DIIKLVGVAKSMDDNFALAK-FKNDMSHETPLIAINMGAKGKLSRVL- 669
Query: 213 AKFGGFLT-FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSKSPI 270
GF+T +APGQ + ++ L ++ P + + GKP+ S+SP
Sbjct: 670 ---NGFMTPVSHPALPFKAAPGQLSATEIRSGLSLLGELEPQN--YYLFGKPISASRSPA 724
Query: 271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
L+N+ FK G + V+ D Q S F G S TIP K + D + AK
Sbjct: 725 LHNKLFKKNGLSDVYGLFETDVAQDIEQVLKSESFGGASVTIPLKLDVIPLLDNLSEAAK 784
Query: 331 SIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 387
+IGAVN I + +S LFG NTD++ G++ L +G + +VI
Sbjct: 785 TIGAVNTIAKVRSSTNSTTLFGDNTDWI--------GIQKTLAAAGAQPGS-----GLVI 831
Query: 388 GAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILA 446
G+GG +A + ++ G + V I R+ + EL + G L + N E+ L
Sbjct: 832 GSGGTARAAIFALQSTGYSPVYIVARSASKVDELVSSFPG----LVHIR--NAEEAQSLE 885
Query: 447 NTTSIGMQPKVDETPIP-------------KHALGHYALVFDAVYTP-KITRLLREAEES 492
+ S+ + PI K A ++ + YT T L+ A ++
Sbjct: 886 SLPSVAVGTIPSSKPIDAGIREILVSIFHHKEAGDAQRVLLEMAYTASSTTALMNMATDA 945
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G V G E I Q EQ+ +TG+
Sbjct: 946 GWKAVEGAEALIWQGIEQFRIWTGI 970
>gi|145577903|gb|ABP82670.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 140/249 (56%), Gaps = 22/249 (8%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK A ++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
+ +A+ IGAVN ++ R DGKL GYNTD +G + A++ ++S L K
Sbjct: 61 GIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SIS---EDPLQEKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAE----TVGGHALSL-ADLENF 437
++IGAGGA +A+ + G + + IANRT D+A+ L V HALSL EN
Sbjct: 109 ILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAENQ 168
Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
D I+ TT+IGM P V+ TP+ + +V D +Y P T++L +A+E GA I
Sbjct: 169 GEYD--IIIQTTTIGMHPHVEYTPLEIRSSKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 498 SGLEMFIGQ 506
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|332981700|ref|YP_004463141.1| shikimate 5-dehydrogenase [Mahella australiensis 50-1 BON]
gi|332699378|gb|AEE96319.1| shikimate 5-dehydrogenase [Mahella australiensis 50-1 BON]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 139/268 (51%), Gaps = 26/268 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T++ +IG PV HS SP ++N ++ + NGV++ +L +++ + + + GF+
Sbjct: 6 TRLIALIGHPVEHSLSPRMHNVIYRHMDINGVYMAFDVLPENVGQAVHGFRALQIRGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED---GLRG 367
T+PHK+A + D D A IGAVN ++ G L GYNTD G + ++E +RG
Sbjct: 66 TVPHKQAVMPYLDATDRTASVIGAVNTVV--NDSGVLTGYNTDSSGFMRSLEYRGIDVRG 123
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET---- 423
R +V + A + + GAG RV IANRT D+A LA+
Sbjct: 124 R-DVLLLGAGGAARAVATALAMHGAG------------RVTIANRTPDKAAALADDINNY 170
Query: 424 VGGHALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIP-KHALGHYALVFDAVYTPK 481
VGG S A L + +L N TS GM P V+ P+P + L A+ +D +Y P+
Sbjct: 171 VGGSVCSGAPLSDIGSISCPYMLVNATSAGMWPHVESCPLPADYDLSGVAVAYDLIYNPE 230
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYE 509
T LL++AEE G V+GL+M I QA E
Sbjct: 231 RTLLLKKAEEHGCMPVNGLDMLIWQAIE 258
>gi|393781437|ref|ZP_10369632.1| shikimate 5-dehydrogenase [Bacteroides salyersiae CL02T12C01]
gi|392676500|gb|EIY69932.1| shikimate 5-dehydrogenase [Bacteroides salyersiae CL02T12C01]
Length = 247
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F S G + +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGYFNEKFHSEGIDAEYVNFEIPSINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + D +D IGAVN I I RQ GK L GYN+D +G +I+ L
Sbjct: 64 KEQVIPFLDSLDPDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIQPLLLP---- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ K +++G GGA KA+ +G K G V +RT H +
Sbjct: 120 --------SHKKALILGTGGASKAVFHGLKNLGIEGVFVSRT-------------HKPGM 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P +T ++
Sbjct: 159 LTYEELTPEIMTEYTVIVNCTPVGMYPKVDFCPDIPYEQLTPNHLLYDLLYNPNVTLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEERGAITKNGLEMLLLQAFAAWE 243
>gi|375086215|ref|ZP_09732637.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
gi|374566077|gb|EHR37330.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
Length = 286
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 147/276 (53%), Gaps = 30/276 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK G+IG P+ HS SP++ N A + G + ++ + + +D+ K + +F GF+
Sbjct: 7 TKNLGVIGYPIKHSLSPVIQNTAIQEAGIDYAYIAMPIAPEDLEKAVIGLKALNFTGFNV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK ++ DE+D +AK IGAVN + DGKL+GYNTD +G I+ + L+ +
Sbjct: 67 TIPHKVNIMQYLDEIDEMAKLIGAVNTV--HIKDGKLYGYNTDAIGFINPL---LKENVE 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL 429
+ K V++GAGGA +A+ G +G + +++A R +A+ LA
Sbjct: 122 IK--------DKTAVILGAGGACRAVVCGLIKQGIKNIILAVRNLAKAQLLANDFN---- 169
Query: 430 SLADLE--NFNPED-------GMILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYT 479
L D++ +++ E+ +L NTT +GM+ +D + P+ ++ A V+D VY
Sbjct: 170 DLVDIKVCDWHSEEFKQYLAQADLLVNTTPLGMEGNIDSKPPVDWESVKKSAFVYDIVYI 229
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
P T+ L+EA+E G I++G M Q +T
Sbjct: 230 PAETKFLQEAKEYGHKILNGERMLAEQGVAALHLWT 265
>gi|256810969|ref|YP_003128338.1| 3-dehydroquinate dehydratase [Methanocaldococcus fervens AG86]
gi|256794169|gb|ACV24838.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus fervens
AG86]
Length = 220
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 133/229 (58%), Gaps = 15/229 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ ++V++ + K AD+VE R+D LK + E+I K P++ T
Sbjct: 1 MICLPVVEDNVEE-AIKTAKKYLEIADIVEFRVDMLKEVS-EEDIAEFAK---YPSIITV 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIV 141
RP WEGG + G + ER+++++ A+E A ++D+EL+ E N I R + K K+I+
Sbjct: 56 RPEWEGGYWRGSDEERLNLIKKAIECNAKFVDIELR--EEKNREIVKFRDEIGSKTKIII 113
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVM 201
S H+++ TPS E L ++V + + G DI KFAT A + DV + ++ IIG+ M
Sbjct: 114 SYHDFEKTPSKEVLDDIVKKALSIG-DIAKFATMANNKEDVLNILEVINKYSGKIIGIGM 172
Query: 202 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQ---PTIKDLLDLYNFR 247
GE G ++RIL FG LTF + + G SAPGQ T+K++ L N +
Sbjct: 173 GENGKLTRILGVYFGSILTFASYK-GKSSAPGQVDIETLKEIWKLMNLK 220
>gi|255525064|ref|ZP_05392009.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
gi|255511217|gb|EET87512.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
Length = 289
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 144/287 (50%), Gaps = 29/287 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T ++ +IG PVGHS SP +YN +F+ +G + ++ + ++ + + +
Sbjct: 3 KRISGTTALYSLIGTPVGHSGSPAMYNYSFQKLGVDSAYLAFDISLEKVPDAIAAMKTLN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K VK DE+ A+ +GAVN I+ ++GKL G TD VG + ++++
Sbjct: 63 IKGSNVTMPCKSEVVKYMDELSPAARIVGAVNTIV--NNNGKLTGNITDGVGFVRSLKEN 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARE- 419
GV + GK +IGAGGA A+ GA+ + I + Y RA E
Sbjct: 121 ---------GVD--VKGKNITIIGAGGAATAIQVQCALDGAKEISIFNIKDDFYKRAEET 169
Query: 420 ---LAETVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYA 471
L + V + L DLE+ IL N T +GM P DE+PI +A+
Sbjct: 170 IEKLKQEVPQCVVELYDLEDRQKLREKIASSNILVNATKVGMHPHEDESPIKDNAVFRKD 229
Query: 472 LVF-DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LV D VY PK T+ L++AE G V G M + Q E ++ +TGL
Sbjct: 230 LVVSDTVYNPKQTKFLKDAEAVGCKTVDGTGMLLWQGAEAFKLYTGL 276
>gi|147920303|ref|YP_685926.1| shikimate 5-dehydrogenase [Methanocella arvoryzae MRE50]
gi|121690454|sp|Q0W4U3.1|AROE_UNCMA RecName: Full=Shikimate dehydrogenase
gi|110621322|emb|CAJ36600.1| shikimate 5-dehydrogenase [Methanocella arvoryzae MRE50]
Length = 269
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 142/272 (52%), Gaps = 30/272 (11%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTI 312
++G++G PV HS SP+++N AFK++ + + V + + F G + TI
Sbjct: 4 IYGVVGYPVEHSLSPVMHNAAFKALDMDCAYHKFEVKGEHLKDAILGARYLGFGGLNVTI 63
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKEAA++ E D A IGA N + +Q + +NTD GAI A+ DG
Sbjct: 64 PHKEAALRIM-EPDRTALEIGAANTLDFKQ----MRAFNTDAAGAIDALRDG-------- 110
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE------TVGG 426
GV L K +V+GAGGA +A+ YG +GA V IANRT +A +LA +V G
Sbjct: 111 -GVE--LENKGVLVLGAGGAARAVVYGLVKEGATVTIANRTTAKAADLAAYMRSFGSVFG 167
Query: 427 HAL-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
+L SL E D I+ NTT IGM + D+ + + L VFD VY P T L
Sbjct: 168 TSLDSLG--EKVRAVD--IVINTTPIGMGWE-DKPLVTRDMLDRSQAVFDLVYRPVETPL 222
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LREA +GA + G+ M Q + +E +TG+
Sbjct: 223 LREARAAGAKTIDGISMLARQGAKSFEIWTGV 254
>gi|398311509|ref|ZP_10514983.1| shikimate 5-dehydrogenase [Bacillus mojavensis RO-H-1]
Length = 278
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 142/270 (52%), Gaps = 20/270 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K++G+IG P+ HS SP ++N A K +G +G + V D + + + G + T
Sbjct: 3 KLYGVIGNPIAHSMSPDIHNAALKDLGLDGHYHAFKVEEDSLEDAVKGIRALGLQGINVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+PHK + + D +D AK +GAVN + RR+ D KL GYNTD G + R + +
Sbjct: 63 VPHKVSIMDHLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFV-------RSLMRI 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYDRARELAETVGG---- 426
S L+ F++IGAGGA +A+ + + I NRT ++A++L ++
Sbjct: 114 LDKPISELS---FLMIGAGGAARAIFTTIVRDNPEKFDICNRTIEKAKQLTDSAPSFRNV 170
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
LS+ + E E ++ +TTS+GM P V++ P+ A+V D VY P T LL
Sbjct: 171 EVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVEDIPLSLQRAASSAVVCDIVYNPIQTSLL 229
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
+EA++ G + G+ MF+ QA + +TG
Sbjct: 230 KEAKQKGLKTLDGVGMFVEQAALSFRLWTG 259
>gi|410668003|ref|YP_006920374.1| shikimate dehydrogenase [Thermacetogenium phaeum DSM 12270]
gi|409105750|gb|AFV11875.1| shikimate dehydrogenase AroE [Thermacetogenium phaeum DSM 12270]
Length = 301
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 149/285 (52%), Gaps = 22/285 (7%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
+G TKVF + G PVGHS SP++ N AF + G + +V L V D +A +
Sbjct: 5 IGGQTKVFALYGDPVGHSLSPVMQNRAFAACGLDCCYVPLRVKRDGLATAVAAIRALGLG 64
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + TIPHKE+ +K DEVD A+ IGAVN ++RR++ +L GYNTD G + ++ +
Sbjct: 65 GVNITIPHKESVLKYLDEVDREAELIGAVNAVVRREN--RLCGYNTDAAGFLRSLRE--- 119
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA---E 422
G + GK VV+GAGGA +A+A+ GA + + NR RAR LA E
Sbjct: 120 -----EAGFEAT--GKKAVVLGAGGAARAVAFALAIGGAVSLSVINRDPGRARTLAADLE 172
Query: 423 TVGGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
G + + E+ + ++ N T +GM P +PIP L LV D VY
Sbjct: 173 RKTGCCTAAGSFHDGLLEEALKGADLVVNATPVGMFPDCHSSPIPAEKLPPGILVCDLVY 232
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
P T+LL +A +G +++G+ M + Q +E +TG+ + A
Sbjct: 233 NPIRTKLLADAAAAGCRVLNGVGMLVAQGALAFELWTGIEAPVAA 277
>gi|254412118|ref|ZP_05025893.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
gi|196181084|gb|EDX76073.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
Length = 288
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 141/285 (49%), Gaps = 29/285 (10%)
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSN 303
+Q+ TK+ G+IG PV HS SPI++N A +G + V++ L V +D+ +++
Sbjct: 1 MQQITGTTKLLGVIGHPVEHSLSPIMHNRAIAQLGVDYVYLPLPVKPEDLDVAVAGFAAI 60
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
GF+ TIPHK+A + EV +A+ +GAVN + R +D G NTD +G I+ +
Sbjct: 61 GLQGFNITIPHKQAIIPLLAEVSDIAQLVGAVNTVWR--TDKGWSGTNTDVLGFIAPLNQ 118
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
R + VV+G GGA +A+ G G + + R + + +
Sbjct: 119 YQRDWHHTKA-----------VVLGYGGAARAVVVGCMQLGCPEIWVVGRNPYKLSQFQQ 167
Query: 423 TVGGHALSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPK---HALGHYA 471
+ LS + P + M +L NTT +GM P V+E+PI + L A
Sbjct: 168 SWANTPLS--KILQAYPWEEMPQLLQQADLLVNTTPVGMSPHVNESPIDEEIIQRLPKGA 225
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +D +YTP T+ L++A++ GA + GLEM + Q + + G
Sbjct: 226 IAYDLIYTPNPTKFLQQAKQQGANPIDGLEMLVQQGAAALQIWLG 270
>gi|254976300|ref|ZP_05272772.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-66c26]
gi|255093686|ref|ZP_05323164.1| shikimate 5-dehydrogenase [Clostridium difficile CIP 107932]
gi|255315436|ref|ZP_05357019.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-76w55]
gi|255518101|ref|ZP_05385777.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-97b34]
gi|255651217|ref|ZP_05398119.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-37x79]
gi|260684282|ref|YP_003215567.1| shikimate 5-dehydrogenase [Clostridium difficile CD196]
gi|260687941|ref|YP_003219075.1| shikimate 5-dehydrogenase [Clostridium difficile R20291]
gi|384361925|ref|YP_006199777.1| shikimate 5-dehydrogenase [Clostridium difficile BI1]
gi|260210445|emb|CBA64887.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
CD196]
gi|260213958|emb|CBE06042.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
R20291]
Length = 287
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +FK + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRL 369
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + + E+G+
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKENGIE--- 121
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVG 425
+ GK ++GAGGA A+ GAR + + Y RA + E +
Sbjct: 122 ---------VKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQTVENIK 172
Query: 426 GHA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-D 475
++L DLE+ N E IL N T IGM+P +ET I ++ LV D
Sbjct: 173 KDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTD 232
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 233 VVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGL 274
>gi|148243617|ref|YP_001228774.1| shikimate dehydrogenase [Synechococcus sp. RCC307]
gi|147851927|emb|CAK29421.1| Shikimate dehydrogenase [Synechococcus sp. RCC307]
Length = 298
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 27/277 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G+IG+P+ HS SP+++N A +G N ++ V D + + + ++ G S
Sbjct: 13 TELLGVIGQPIHHSLSPVMHNAAIAELGLNWRYLAFAVAPDRLQQAIEGLAAMGCRGLSV 72
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKE VD VA+ +GAVNC+I G G NTD+ G ++ L GRL
Sbjct: 73 TIPHKETVQPLLSSVDAVARELGAVNCLIP-DGQGGWRGTNTDWSGFLTP----LSGRLQ 127
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA- 428
G +++G+GG +A+ G +VV+ R + LAE V A
Sbjct: 128 EGGQA---------LILGSGGVVRAVLRSCCELGIEQVVLRGRNRSKLEALAEDVRNWAP 178
Query: 429 ---LSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALG---HYALVFDAVYTP 480
LS D E P E ++ N T +GM D+TP+ L A+V+D VYTP
Sbjct: 179 PLLLSSGD-EPLEPLLERSNLVVNGTPLGMAEMRDQTPLSAQQLSLLPASAVVYDVVYTP 237
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ T LL+ A + G ++ GLEM + Q + +TGL
Sbjct: 238 RPTLLLKLAAQRGLSVFDGLEMLVQQGAAALKLWTGL 274
>gi|409124062|ref|ZP_11223457.1| shikimate 5-dehydrogenase [Gillisia sp. CBA3202]
Length = 243
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 135/261 (51%), Gaps = 25/261 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKF-FQTYSSNDFAGFSCTI 312
K FG+IGK + +S S +N+ F S ++ + + I +F +ND +GF+ TI
Sbjct: 2 KTFGLIGKNIDYSFSRTYFNQKFSSEKIEAIYKNFDLAHITEFPVLLNENNDISGFNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
P+KEA + DE+D+ AK IGAVN I ++++ KL GYNTDY G A++ L+
Sbjct: 62 PYKEAIIPYLDELDSTAKEIGAVNTIKIKENE-KLIGYNTDYFGFTEALKPYLKAH---- 116
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA++Y + +RT ++ G + +
Sbjct: 117 --------HKKALILGTGGASKAISYALQKLEIEFTYVSRT--------KSFGN--FTYS 158
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+L + E ++ NTT +G P +++ PIP L LVFD +Y P T+L++ A +
Sbjct: 159 ELTSDIMESHNLIINTTPLGTSPNIEQNPPIPTQFLTSKHLVFDLIYNPSHTKLMKLALD 218
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
A + +GL M QA + +E
Sbjct: 219 QNAKVTNGLAMLEFQAEKAWE 239
>gi|156743354|ref|YP_001433483.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
gi|156234682|gb|ABU59465.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
Length = 283
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 146/280 (52%), Gaps = 31/280 (11%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYS--SNDFAGFSCTIPH 314
G+IG PV HS SP L++ AF+ +G + A + S + G + T+PH
Sbjct: 7 GVIGDPVSHSLSPFLHHAAFEHLGIAARYERWQTSSAALPARVASLRAPHVLGANVTLPH 66
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K A V+ D +D +A IGAVN I+R DG+L G NTD I+ + + G
Sbjct: 67 KIAVVRLLDRLDPLAAQIGAVNTIVR-LPDGQLEGCNTDAPATIATLRE--------DAG 117
Query: 375 VSSALAGKLFVVIGAGGAGKALAY---GAKAKGARVVIANRTYDRARELAETVGG----- 426
V A G+ V++GA GA +A A+ GA+A V+ NRT +RA EL V
Sbjct: 118 VDPA--GRRVVILGASGAARAAAFALIGARASMLTVI--NRTLERAEELLADVLASRDDD 173
Query: 427 ---HALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
AL+L D + + ++ N TS+G DETP+P + + ALVFD VY P
Sbjct: 174 PYLRALALDDPDVPDAIRAADVIINATSLGWH--RDETPLPGYLIPATALVFDMVYQP-- 229
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
TRLLREA ++GA+ + G M + QA +ER+TG P ++
Sbjct: 230 TRLLREAAQAGASTLDGRGMLVRQAALSFERWTGAPAPLD 269
>gi|154485097|ref|ZP_02027545.1| hypothetical protein EUBVEN_02820 [Eubacterium ventriosum ATCC
27560]
gi|149734050|gb|EDM50169.1| shikimate dehydrogenase [Eubacterium ventriosum ATCC 27560]
Length = 289
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G++G PV HSKSP+++NEA++ +G + V++ V +++ F+ + AGF+C
Sbjct: 11 TRLTGLLGSPVSHSKSPLMHNEAYRLLGLDYVYLCFDVPENNLQVAFEGLKKLNVAGFNC 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K K DE+ AK IGAVN ++ +GK G+NTD G I +++D
Sbjct: 71 TMPDKTLMSKLVDELSPAAKIIGAVNTVV--NDNGKFVGHNTDGTGYIRSLQD------- 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
+ GK ++G+GGA ++ A GAR + I + + +A +L +
Sbjct: 122 ----CGHNIVGKKMTLLGSGGAASSICVQAALDGAREIDVLSIKDNFWSKAEKLVSDIND 177
Query: 427 HALSLADLENFNPE-------DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVY 478
+ +L N + IL N T IGM P D + ++ L+ D +Y
Sbjct: 178 NTDCKVNLIEMNDDSIGESVFSSDILTNATPIGMAPNTDGCLVKDSSILRPELIVSDIIY 237
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T+L + A+E G ++ +GL M + Q E + +TG
Sbjct: 238 NPLETKLYKMAKEKGCSVFNGLYMLLYQGAEAFFLWTG 275
>gi|154276498|ref|XP_001539094.1| 3-dehydroquinate synthase [Ajellomyces capsulatus NAm1]
gi|327507648|sp|A6R8Q8.1|ARO1_AJECN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|150414167|gb|EDN09532.1| 3-dehydroquinate synthase [Ajellomyces capsulatus NAm1]
Length = 1538
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 241/552 (43%), Gaps = 74/552 (13%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L + VP +FT R +GG++ D
Sbjct: 992 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRTSVPLVFTIRTKGQGGRFPDDAY 1051
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + RLA+ +G++++D+E+ + ++ K +I S H+ + S + S
Sbjct: 1052 DAALQLYRLAVRMGSEFVDLEISFPEQLLRTVTEMK-GFSTIIASHHDPKGQLSWVNGSW 1110
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A I D + + ++ +PII + MG++G +SR+L
Sbjct: 1111 IQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNIPIIAINMGDKGQLSRML- 1169
Query: 213 AKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSPI 270
GF+T + + +APGQ + +++ +G K F +IG PV S+SP
Sbjct: 1170 ---NGFMTPVSHPSLPFKAAPGQLSAREIRK--GLSLIGEIKAKKFAVIGNPVSASRSPA 1224
Query: 271 LYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328
++N F+ +G + L D ++AK F S F G S TIP K + + DE+
Sbjct: 1225 MHNTLFRQMGLPHTYGTLETDNPEVAKEF--IRSPGFGGASVTIPLKLSIMPLLDEIAPE 1282
Query: 329 AKSIGAVNCII-------RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
A SIGAVN I+ + +L G+NTD+ G + + D S+ L
Sbjct: 1283 AMSIGAVNTIVCAPPAPDSKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAGL-- 1340
Query: 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNP 439
VIG GG +A + + G + + + R+ D+ + T H + + LE+
Sbjct: 1341 ----VIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRI--LEDVKA 1394
Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD-----------------------A 476
+ + T +IG P + PI H +FD
Sbjct: 1395 LESL---PTVAIGTIP--GDKPIEPHMREILCKLFDLCEKANSDTEQARGVSTKRILLEM 1449
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYS 536
Y P +T L++ A +SG T++ GLE + Q Q E +T + +K + + L +
Sbjct: 1450 AYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNITPVYEYARCWKVYDVKLIN 1509
Query: 537 FNKFHIFTYFLF 548
+ + + +
Sbjct: 1510 CERGNAISLLVL 1521
>gi|312135613|ref|YP_004002951.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
gi|311775664|gb|ADQ05151.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
Length = 283
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 136/268 (50%), Gaps = 23/268 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYSSNDFAGFSCTIP 313
+IGK + HS SP ++N +G + V+ ++ + D K + D GF+ TIP
Sbjct: 6 LIGKSLKHSISPFIHNRILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVVGFNITIP 65
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE ++ CDEV + I A N + ++ +GKL YNTD++G ++ED
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKKNGKLLAYNTDWIGFKRSLED---------- 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLA 432
+ + K +V+G+GGA KA YG G + V + NRTY++ E +++ L +
Sbjct: 114 -IGVDVKDKKILVLGSGGAAKACIYGLYRMGVKEVFVTNRTYEKT-ESIKSLFEDILKII 171
Query: 433 DLENFNPEDGM--ILANTTSIGMQPKVDETP--IPKHALGHYALVFDAVYTPKITRLLRE 488
+E D I+ NTTS+GM P ++ +P + G V+D +Y P T L+E
Sbjct: 172 PVEWLKKYDFKYDIIINTTSVGMFPNIENSPFDFENYVAGIPVFVYDIIYNPLKTTFLKE 231
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
AE G +GL+M + QA E + + G
Sbjct: 232 AEIRGIKTGNGLKMLVYQAVEAEKIWFG 259
>gi|299140686|ref|ZP_07033824.1| shikimate dehydrogenase [Prevotella oris C735]
gi|298577652|gb|EFI49520.1| shikimate dehydrogenase [Prevotella oris C735]
Length = 248
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 134/261 (51%), Gaps = 26/261 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + + + + + + + N D G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGFFNEKFQNEGIDAQYCNFEIPSLDCLPEIIAQNPDLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVS 372
KE + DE+ AK+IGAVN I + K F GYN+D +G +IE L
Sbjct: 64 KEKIIDFLDEISPEAKNIGAVNVIRVNHNGNKTFMKGYNSDVIGFTKSIEPLLE------ 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ YG ++ G ++ +R E T+ +++
Sbjct: 118 ------RCHKKALILGTGGASKAIKYGLESLGLETLLVSRF-----ERPGTIQYQSVTPQ 166
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
L+ + ++ N T GM PK DE P +P A+ + L++D +Y P T + + E
Sbjct: 167 LLQEYK-----VIVNCTPCGMYPKADECPALPYEAMDSHTLLYDLIYNPDETLFMHKGAE 221
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
GAT+ +GLEM + QA+E ++
Sbjct: 222 YGATVKNGLEMLLLQAFESWK 242
>gi|388580067|gb|EIM20385.1| Pentafunctional AroM protein [Wallemia sebi CBS 633.66]
Length = 1530
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 235/517 (45%), Gaps = 69/517 (13%)
Query: 47 ASGADLVEIRLDGLKNFNPRENIKT-------------LIKESPVPTLFTYRPIWEGGQY 93
++G D +E+R+D L + + L + + +P ++T R +GG
Sbjct: 1025 SAGIDALEVRVDLLSEDGKAPTVPSVPSADYVSAQLSALRQCTSLPIIYTVRTHSQGGMI 1084
Query: 94 DGDENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNY--QYTP 150
++ E + L L + LG+++IDVEL + D + K+ K+I S H++ Y
Sbjct: 1085 PDEKFEDIAALIELGIALGSEFIDVELNLPDSLIDDVV-KRKGNSKIIASMHDFPGNYKW 1143
Query: 151 SVEDLSNLVARIQASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERGLIS 208
++S ++ A D+VK A + D F + + P++ +G G +S
Sbjct: 1144 DSTEMSQKYSQ-GAKYGDVVKLVGRANSLEDNFETSKFLSKLPASPPVLAFNVGVIGQLS 1202
Query: 209 RILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR-QMGPDTKVFGIIGKPVGHSK 267
RI +T L + +APGQ + K++ N Q+ D+K F + G P+ S+
Sbjct: 1203 RIQNYVLTP-VTHELLPSK--AAPGQLSFKEIQQALNLTGQL--DSKKFYLFGCPIQQSQ 1257
Query: 268 SPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326
SP L+N F+ +G V+ +H Q S DF G S TIPHK + +
Sbjct: 1258 SPTLHNTGFQQLGLPYVYSLHEREQLDGSVDQILESPDFGGASVTIPHKVGILNKIHTLS 1317
Query: 327 TVAKSIGAVNCIIRRQS-DGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
AK+IGAVN I+ R+ +GK LFG NTD+ AI+ + ++ S ++ AG
Sbjct: 1318 MPAKAIGAVNTIVVREDVNGKRELFGDNTDW----QAIKSCAQSSVDGSDPITKESAG-- 1371
Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
+VIGAGG +A Y A G + Y+R +E AE V D FN +
Sbjct: 1372 -LVIGAGGTCRAALYALHALGCGTIY---LYNRTKENAENV------TKDFPTFNIQ--- 1418
Query: 444 ILANTTSIGMQPKV-----------------DETPIPKHALGHYA-LVFDAVYTPKITRL 485
+L N ++ +P++ D +PK G + +V D Y P T L
Sbjct: 1419 VLDNLNNVVEKPQIIVSCIPASATTIEEGSGDGIYLPKTIFGRQSGVVIDMSYKPLKTPL 1478
Query: 486 LREAEESGATI-VSGLEMFIGQAYEQYERFTG-LPGK 520
LR +EE+ + V G + + Q + Q++ +TG PG+
Sbjct: 1479 LRLSEEANGWVGVPGATILLEQGFAQFKLWTGRQPGR 1515
>gi|427705993|ref|YP_007048370.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
gi|427358498|gb|AFY41220.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
Length = 290
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 140/267 (52%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G+IG PV HS SP+++N A ++G + +++ + +++ +++ GFS
Sbjct: 8 TELLGVIGHPVEHSLSPVMHNAALAALGVDYIYLPFPIAPENLQIAIAGFATIGVTGFSV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ VA++IGAVN + R+ + + G NTD G I+ ++ +
Sbjct: 68 TIPHKQAIMPLLSEITLVAQAIGAVNTVTRK--NQQWVGTNTDIEGFIAPLQTTYQ---- 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ K+ +++G GGA +A+ G G A + + R R E ++ G +
Sbjct: 122 ------QDWSQKVAIILGNGGAARAVVAGCYQLGFAEIHVVGRNEQRLIEFRDSWGSSPI 175
Query: 430 -------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+ L P+ + L NTT +GM P VD++P+ + A+ +D +Y
Sbjct: 176 AEKLQVHTWPTLVKLIPQANL-LVNTTPMGMYPNVDDSPLTAAEMNDLPSGAIAYDLIYI 234
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
P+ T+ L++AE+ GA ++ GLEM + Q
Sbjct: 235 PQPTKFLQQAEKQGAIVIDGLEMLVQQ 261
>gi|430837903|ref|ZP_19455853.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430858336|ref|ZP_19475964.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|431369954|ref|ZP_19509653.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
gi|430492183|gb|ELA68597.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430545545|gb|ELA85518.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|430583701|gb|ELB22059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
Length = 284
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESVRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|288800100|ref|ZP_06405559.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
gi|288333348|gb|EFC71827.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
Length = 247
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 141/265 (53%), Gaps = 26/265 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG +GHS S +NE FK+ + V+++ + +I F+ +SN D G + TIP+
Sbjct: 4 YGLIGLKLGHSFSLNYFNEKFKNENIDAVYINYEISNIQDIFEIIASNPDLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNC--IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + DEV A +IGAVN II +++ L G+N+D VG +IE L R++
Sbjct: 64 KEQIIPYLDEVTPEATAIGAVNVVKIIHQENKTILKGFNSDVVGFTQSIEPLLE-RVH-- 120
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GG+ KA+A+G ++ G V+ +RT +A++
Sbjct: 121 ---------KKALILGTGGSAKAIAFGLESLGLEVLFVSRTPQV----------NAITYN 161
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
++ ++ ++ N T +GM P D P +P A+ L++D +Y P T +++
Sbjct: 162 EVTEATIKEYKVIVNCTPLGMYPNSDSYPELPYEAMDSSHLLYDLIYNPNETTFMKKGAM 221
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
GAT+ +GLEM + QA+ +E + G
Sbjct: 222 HGATVKNGLEMLLLQAFVSWEYWHG 246
>gi|150005076|ref|YP_001299820.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|294778884|ref|ZP_06744300.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|319642584|ref|ZP_07997231.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345520174|ref|ZP_08799574.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423311983|ref|ZP_17289920.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
gi|149933500|gb|ABR40198.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|254836003|gb|EET16312.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294447193|gb|EFG15777.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|317385818|gb|EFV66750.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392689362|gb|EIY82640.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
Length = 246
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K +G+IG P+GHS S +NE F S + +V+ + I + +N D G + TI
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGLNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNC--IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + DE+D A +IGAVN I+R++ +L GYN+D +G +IE L +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTRLIGYNSDVIGFTQSIEPLLEPQ-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+AYG K G +R RE E + L+
Sbjct: 120 ----------HKKALILGTGGASKAIAYGLKKLGLECKFVSRN---LRE--EMLTYDQLT 164
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++ + ++ N T +GM P+ DE P IP L L++D +Y P T +++
Sbjct: 165 PEIMDEYK-----VVVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMKKG 219
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
+ GA +GLEM + QA+ ++
Sbjct: 220 ADKGAITKNGLEMLLLQAFGAWD 242
>gi|69249504|ref|ZP_00604998.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257878246|ref|ZP_05657899.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257880974|ref|ZP_05660627.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257889556|ref|ZP_05669209.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257892504|ref|ZP_05672157.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260559796|ref|ZP_05831975.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|261207823|ref|ZP_05922508.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289566376|ref|ZP_06446804.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|293560591|ref|ZP_06677079.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|293569865|ref|ZP_06680952.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|294621710|ref|ZP_06700874.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|314937722|ref|ZP_07845045.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|314942645|ref|ZP_07849473.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|314948840|ref|ZP_07852211.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|314950852|ref|ZP_07853922.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|314992913|ref|ZP_07858311.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|314995671|ref|ZP_07860762.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|383328271|ref|YP_005354155.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|389868552|ref|YP_006375975.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|406581268|ref|ZP_11056426.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|406583572|ref|ZP_11058628.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|406585881|ref|ZP_11060835.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|406591382|ref|ZP_11065666.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410937496|ref|ZP_11369356.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|415891282|ref|ZP_11549686.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|416142973|ref|ZP_11599688.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|424790457|ref|ZP_18217001.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|424795666|ref|ZP_18221490.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|424819259|ref|ZP_18244382.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|424857325|ref|ZP_18281485.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|424864847|ref|ZP_18288746.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|424950425|ref|ZP_18365589.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|424953710|ref|ZP_18368654.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|424956712|ref|ZP_18371476.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|424959170|ref|ZP_18373771.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|424963383|ref|ZP_18377611.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|424969022|ref|ZP_18382613.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|424969603|ref|ZP_18383161.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|424973123|ref|ZP_18386414.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|424976239|ref|ZP_18389343.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|424980094|ref|ZP_18392912.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|424984020|ref|ZP_18396574.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|424987351|ref|ZP_18399729.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|424990468|ref|ZP_18402680.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|424993800|ref|ZP_18405775.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|424997154|ref|ZP_18408921.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|425000132|ref|ZP_18411713.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|425004114|ref|ZP_18415443.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|425006313|ref|ZP_18417493.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|425009912|ref|ZP_18420895.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|425014063|ref|ZP_18424759.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|425016425|ref|ZP_18426989.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|425019992|ref|ZP_18430322.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|425024056|ref|ZP_18434145.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|425031046|ref|ZP_18436191.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|425034089|ref|ZP_18439001.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|425038010|ref|ZP_18442643.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|425040819|ref|ZP_18445261.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|425044491|ref|ZP_18448650.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|425049209|ref|ZP_18453074.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|425051105|ref|ZP_18454787.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|425062417|ref|ZP_18465577.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|427394923|ref|ZP_18887845.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430825333|ref|ZP_19443538.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430828586|ref|ZP_19446706.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430830533|ref|ZP_19448591.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430844277|ref|ZP_19462175.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430846256|ref|ZP_19464116.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430854634|ref|ZP_19472347.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430862200|ref|ZP_19479552.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430870903|ref|ZP_19483490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430959924|ref|ZP_19487059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|431008916|ref|ZP_19489356.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|431195518|ref|ZP_19500496.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|431228613|ref|ZP_19501754.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|431258926|ref|ZP_19505103.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|431540493|ref|ZP_19517950.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|431745997|ref|ZP_19534833.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|431748492|ref|ZP_19537250.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|431754638|ref|ZP_19543299.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|431765421|ref|ZP_19553935.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|431770633|ref|ZP_19559032.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|431773158|ref|ZP_19561490.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|431775980|ref|ZP_19564249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|431778556|ref|ZP_19566766.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|431782083|ref|ZP_19570221.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|431785527|ref|ZP_19573552.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|447913136|ref|YP_007394548.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
gi|68194130|gb|EAN08666.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257812474|gb|EEV41232.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257816632|gb|EEV43960.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257825916|gb|EEV52542.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257828883|gb|EEV55490.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260074020|gb|EEW62343.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|260078206|gb|EEW65912.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289161814|gb|EFD09686.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|291587613|gb|EFF19490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|291598719|gb|EFF29772.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|291605414|gb|EFF34860.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|313590144|gb|EFR68989.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|313592556|gb|EFR71401.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|313596985|gb|EFR75830.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|313598582|gb|EFR77427.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|313642925|gb|EFS07505.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644783|gb|EFS09363.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|364089488|gb|EHM32174.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|364094077|gb|EHM36288.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|378937965|gb|AFC63037.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|388533801|gb|AFK58993.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|402920798|gb|EJX41286.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|402924110|gb|EJX44343.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|402926323|gb|EJX46367.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|402929074|gb|EJX48868.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|402933157|gb|EJX52612.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|402938462|gb|EJX57471.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|402939866|gb|EJX58747.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|402945304|gb|EJX63662.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|402949532|gb|EJX67586.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|402949997|gb|EJX68022.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|402951232|gb|EJX69181.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|402959301|gb|EJX76568.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|402963746|gb|EJX80595.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|402967447|gb|EJX83999.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|402969940|gb|EJX86316.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|402970247|gb|EJX86605.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|402974689|gb|EJX90713.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|402979659|gb|EJX95321.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|402981658|gb|EJX97173.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|402986775|gb|EJY01884.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|402989906|gb|EJY04808.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|402990517|gb|EJY05387.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|402997497|gb|EJY11816.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|402999714|gb|EJY13891.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|403001557|gb|EJY15603.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|403007094|gb|EJY20689.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|403008172|gb|EJY21700.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|403010421|gb|EJY23803.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|403016457|gb|EJY29275.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|403020368|gb|EJY32910.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|403021388|gb|EJY33853.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|403027677|gb|EJY39552.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|403028708|gb|EJY40517.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|403029808|gb|EJY41540.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|403038452|gb|EJY49667.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|403038554|gb|EJY49765.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|404452798|gb|EJZ99949.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|404456367|gb|EKA03090.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|404461989|gb|EKA07837.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|404467858|gb|EKA12918.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410734109|gb|EKQ76030.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|425724059|gb|EKU86943.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430446226|gb|ELA55911.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430483135|gb|ELA60234.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430483419|gb|ELA60497.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430496867|gb|ELA72926.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430539050|gb|ELA79312.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430548293|gb|ELA88198.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430549491|gb|ELA89323.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430556408|gb|ELA95916.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|430558702|gb|ELA98113.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430560831|gb|ELB00123.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|430571896|gb|ELB10770.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|430574915|gb|ELB13678.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|430577021|gb|ELB15626.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|430593687|gb|ELB31669.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|430609424|gb|ELB46618.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|430613695|gb|ELB50698.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|430619232|gb|ELB56060.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|430628508|gb|ELB64943.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|430634900|gb|ELB71006.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|430637123|gb|ELB73161.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|430642095|gb|ELB77878.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|430643629|gb|ELB79348.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|430647496|gb|ELB82942.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|430648098|gb|ELB83521.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|445188845|gb|AGE30487.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
Length = 284
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|381182527|ref|ZP_09891329.1| shikimate 5-dehydrogenase [Listeriaceae bacterium TTU M1-001]
gi|380317577|gb|EIA20894.1| shikimate 5-dehydrogenase [Listeriaceae bacterium TTU M1-001]
Length = 269
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 19/267 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HS SP ++N A +G + + L ++ K F + G + T
Sbjct: 2 KNFAVIGNPISHSLSPEMHNAAILDLGIDADYTRKQLSIEQFDKEFPLFLKK-IDGCNVT 60
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
+P KE + DE+D AK GAVN I++R S K GYNTD +G + + + + L+
Sbjct: 61 VPFKERVIPFLDELDDFAKKCGAVNTIVQRNS--KWVGYNTDGLGYLLGLAE--KRALHK 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETV-GGHAL 429
+ V ++IGAGGA K + K K G +V +ANRT +A E+ A+
Sbjct: 117 NDRV---------LLIGAGGASKGIYLALKEKVGCQVTVANRTIQKAAEMIRDFENDRAI 167
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SL D+ D ++ TTSIG+ +DETPI H L + D +Y P T L+EA
Sbjct: 168 SL-DMAEEELGDFTVVIQTTSIGLPKTIDETPISLHHLKPGTICSDIIYNPAKTLFLKEA 226
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
E+ I +GL MFI Q + +TG
Sbjct: 227 EKRQGIIQNGLPMFIHQGALAFSLWTG 253
>gi|404417969|ref|ZP_10999751.1| shikimate 5-dehydrogenase [Staphylococcus arlettae CVD059]
gi|403489685|gb|EJY95248.1| shikimate 5-dehydrogenase [Staphylococcus arlettae CVD059]
Length = 265
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 133/263 (50%), Gaps = 20/263 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK+VG + L +D + GF+ TIP
Sbjct: 3 FAVIGSPIEHSLSPVMHNANFKAVGDQHTYDALRIDPQHFHSIKEIIKEQGLDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE+ + DE+D A+++GAVN ++ + D K GYNTD +G + ++++
Sbjct: 63 HKESILPYLDEIDEQAETVGAVNTVLIQ--DDKWIGYNTDGIGYVKSLKE---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K + K ++ +ANRT R V + SL
Sbjct: 111 -VYPDLENAYILILGAGGASKGITNELIKYVNPKITVANRTLSRFDHWNLDV--NTASLV 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D+E E +I+ NTT GM + E PI L LV D VY P T +L AE+
Sbjct: 168 DVEPVLSEFDIII-NTTPAGMDDNL-ELPIHLDYLSPQTLVSDIVYVPFKTPILAAAEQK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFT 515
G I +GL+MF+ Q E Y+ +T
Sbjct: 226 GNPIHNGLDMFVYQGAESYKIWT 248
>gi|126700322|ref|YP_001089219.1| shikimate 5-dehydrogenase [Clostridium difficile 630]
gi|115251759|emb|CAJ69594.1| Shikimate dehydrogenase 2 [Clostridium difficile 630]
Length = 287
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +FK + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + +++
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKEN------ 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 426
GV + GK ++GAGGA A+ GAR + I N Y RA + E +
Sbjct: 119 ---GVE--VKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQTVENIKK 173
Query: 427 HA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
++L DLE+ N E IL N T IGM+P +ET I ++ LV D
Sbjct: 174 DVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDV 233
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 234 VYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGL 274
>gi|74599755|sp|Q5XNP0.1|ARO1_SCLSC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|53854589|gb|AAU95677.1| arom [Sclerotinia sclerotiorum]
Length = 1590
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 63/508 (12%)
Query: 47 ASGADLVEIRLDGLKNFNPRE----------NIKTLIKESPVPTLFTYRPIWEGGQY-DG 95
A G+D VE+R+D L++ + I L +P +FT R + +GG++ D
Sbjct: 1072 AVGSDAVEVRVDLLEDPSSTNGIPGTDFLSVQIAHLRSVVHLPVIFTVRTVSQGGRFPDA 1131
Query: 96 DENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDL 155
E + + +LA+++G +YID+E+ E + K ++I S H+ Q T S ++
Sbjct: 1132 AHEEALKLYKLAVKMGIEYIDLEIAFPDELLQEVTEAK-GFSRIIASHHDPQGTLSWKNG 1190
Query: 156 SNLVARIQA-SGADIVKFATTALDITD---VARVFQITVHS--QVPIIGLVMGERGLISR 209
+A DI+K +A I D +A+ F+ T+ + P+I + MG G +SR
Sbjct: 1191 GWFQHYNRALQYGDIIKLVGSAKSIEDNFALAK-FKKTMAAAHDTPLIAINMGVTGKLSR 1249
Query: 210 ILCAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGHSK 267
+L GF+T + + +APGQ + ++ L ++ P K F + G P+ S+
Sbjct: 1250 VL----NGFMTPVSHPSLPFKAAPGQLSAAEIRSTLSTLGEIEP--KSFYLFGTPISQSR 1303
Query: 268 SPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327
SP L+N FK G + L D +A + DF G S TIP K + D V
Sbjct: 1304 SPALHNTLFKQTGLPHRYSRLETDRVADVQDVIRAPDFGGASVTIPLKLDIIPLLDSVTD 1363
Query: 328 VAKSIGAVNCIIRRQSD-GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
K IGAVN II + +L G NTD++G ++ ++ S S + +V
Sbjct: 1364 AVKVIGAVNTIIPTPDNPPRLVGENTDWLGMTHSL-------MSASHTPSPVDSPSPALV 1416
Query: 387 IGAGGAGKALAYGAKAKG-ARVVIANRTYDRAREL-------------------AETVGG 426
IGAGG +A Y + G + + + RT + L E
Sbjct: 1417 IGAGGTARAAIYALHSLGHSPIYMVARTPSKLDTLINSFPSSFNIIPLPSTTSATELTTP 1476
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
A++++ + P + + + K DE G + + Y P T L+
Sbjct: 1477 PAVAISTIPADRPIESNMRETLAVLLRHEKKDE--------GKQRTLLEMAYKPSQTPLM 1528
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERF 514
R AE++G + GLE+ Q + Q F
Sbjct: 1529 RMAEDAGWVAIPGLEVLSAQGWYQVSLF 1556
>gi|384172242|ref|YP_005553619.1| shikimate 5-dehydrogenase [Arcobacter sp. L]
gi|345471852|dbj|BAK73302.1| shikimate 5-dehydrogenase [Arcobacter sp. L]
Length = 264
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 136/269 (50%), Gaps = 31/269 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TK F I G PV HSKSP + N K + F+G++ HL+ +I K + N+++G +
Sbjct: 2 TKKFVIFGNPVEHSKSPQMQNAGLKYINFDGIYEKHHLIDGNIIK--NIFLENNYSGANI 59
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKE A + D V+ +AK I AVN I + DGK+ YNTD G + AIE
Sbjct: 60 TVPHKEFAYENADIVEGIAKEIKAVNTYILK--DGKVVAYNTDAPGFLKAIES------- 110
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G V + L ++GAGG KA++ K K +V + NR+ + E H +
Sbjct: 111 -FGKVKNVL------LLGAGGTAKAISLALKEKNIKVTVLNRSEGK----LEFFKNHNIP 159
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKH----ALGHYALVFDAVYTPKITRLL 486
ENF P+ ++AN+TS G+ K D P PK L + + FD VY KIT L
Sbjct: 160 SFSWENFKPDTYDLVANSTSAGL--KDDYLPAPKELLEPILKNASFAFDCVYG-KITPFL 216
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFT 515
A E+ I G +M + Q +E FT
Sbjct: 217 ALARENNCEIKDGEDMLLYQGLLAFELFT 245
>gi|384547828|ref|YP_005737081.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ED133]
gi|298694877|gb|ADI98099.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
ED133]
Length = 268
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEVISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE + + +D A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 YKERIIPYLEHIDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNINQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D +Y P T +L EAE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIIYIPYKTPILEEAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|225850624|ref|YP_002730858.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
gi|225646318|gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
Length = 281
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 41/289 (14%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T+V+GI G PV HSKSP+ N AF +G N V++ V +D+ + + G +
Sbjct: 8 ETEVYGIFGYPVKHSKSPLFQNAAFSYLGINAVYLPFSVKPEDLKNAVEGIRALSIKGVN 67
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKE +K +E+ K IGA N I + DG L YNTD G I +++
Sbjct: 68 ITVPHKEEVLKLVNEISEEVKYIGASNTI--KNIDGYLIAYNTDAYGFIQGLKE------ 119
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-- 426
+ ++GK +VIGAGGA +A+ YG +GA ++ I+NRT RA ++
Sbjct: 120 -----LVENISGKKVLVIGAGGASRAVVYGLIKEGAEKIYISNRTLKRAEDIIRDFSKLS 174
Query: 427 -------HALSLADLENF--NPEDGMILANTTSIGM----QPKVDETPIPKHALGHYALV 473
L L+ +E N + I+ NTTS+G+ +P D + I K +V
Sbjct: 175 RFTEKILEPLPLSQIEELLCNVD---IIVNTTSVGLRDEDRPLFDYSKIEKR-----HIV 226
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
D +Y + T LL+ AEE G GL M + Q +E +TG +N
Sbjct: 227 VDIIY--RKTPLLKAAEEKGCLWQDGLPMLLYQGARSFEIWTGKKAPIN 273
>gi|423081389|ref|ZP_17069997.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
gi|357551055|gb|EHJ32859.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
Length = 287
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 142/281 (50%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +FK + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + +++
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKEN------ 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT----YDRARELAETVGG 426
GV + GK ++GAGGA A+ GAR + T Y R+ + E +
Sbjct: 119 ---GVE--VKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRSEQTVENIKK 173
Query: 427 HA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
++L DLE+ N E IL N T IGM+P +ET I ++ LV D
Sbjct: 174 DVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDV 233
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 234 VYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGL 274
>gi|378727120|gb|EHY53579.1| pentafunctional AROM polypeptide [Exophiala dermatitidis NIH/UT8656]
Length = 1624
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 236/539 (43%), Gaps = 86/539 (15%)
Query: 49 GADLVEIRLDGLKNFNPRENIKT---------LIKES-PVPTLFTYRPIWEGGQY-DGDE 97
G+D VE+R+D LK+ + + I + L++ + P+P +FT R +GG++ D +
Sbjct: 1080 GSDAVELRVDLLKDPDSQSAIPSTEYVTSQLSLLRATVPLPVVFTVRTSSQGGRFPDTAQ 1139
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFN-DSIRG-KKPEKCKVIVSSHNYQYTPSVEDL 155
E + + LA+ +G +++D+E+ E SI K K+I S H+ Q S
Sbjct: 1140 AEYLQLCTLAIRMGCEFVDLEVATFPEIVLISIAALKSSSNSKIIASHHDPQGRLSWSKP 1199
Query: 156 SNLVA---RIQASGADIVKFATTALDITD---VARVFQITV--HSQVPIIGLVMGERGLI 207
+ + R G D+VK A I D + R Q + H +P+I + MG G
Sbjct: 1200 GSWIPLYNRCLQYG-DVVKLIGVAQTIDDNFSLRRFKQWSAEQHPDLPLIAINMGRAGQA 1258
Query: 208 SRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLD-LYNFRQMGPDTKVFGIIGKPVGH 265
SR+L GF+T +APGQ + K++ L ++ P K F + G P+
Sbjct: 1259 SRVL----NGFMTPVSHPALPFKAAPGQLSAKEIRQGLTLLGELAP--KQFLLFGSPIQA 1312
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV 325
SKSP+++N F G ++ + + + DF G S TIP K + DEV
Sbjct: 1313 SKSPVMHNRLFAETGLPHIYSLCETTSVDEVKARIRAEDFGGASVTIPLKLDVMPLLDEV 1372
Query: 326 DTVAKSIGAVNCIIRRQ----SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
D A+ IGAVN I+ Q +L GYNTDY+G + D LR + G S+A+
Sbjct: 1373 DETARLIGAVNTIVPVQDLQSQKTRLVGYNTDYLGMM----DCLR-----AAGASAAIGD 1423
Query: 382 --KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLE-- 435
+ +VIG GG +A + G + + + R + ELA++ + L + D E
Sbjct: 1424 VPQSGLVIGGGGTARAAIQTLHSMGYSPIYLIGRNRTKLAELADSFPAAYELVVLDAEVE 1483
Query: 436 ---------------NFNPEDGMILANTTSIGMQP-------KVDETPIP---------- 463
N P I +I + P ++ P+P
Sbjct: 1484 GAKTGENKSRFINTTNTPPPTVAIATIPANIPIDPTLGSALSRIFALPLPVRDAGEGQGQ 1543
Query: 464 ----KHALGHYALVFDAVYTPKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
++ + Y P T +++ AE++G + GLE+ + Q Q+E +TG+
Sbjct: 1544 GQGSATTTKPKRILLELAYKPAHTAVMQMAEQTGGWKTIQGLEVLVAQGLWQFEYWTGI 1602
>gi|420177912|ref|ZP_14684246.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
gi|420181401|ref|ZP_14687602.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394246317|gb|EJD91577.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394247099|gb|EJD92347.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
Length = 269
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 140/273 (51%), Gaps = 24/273 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP++++ F+S+ + +++ + + S GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPFNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D+++ AKS+GAVN ++ + DGK GYNTD +G + +GL+ +
Sbjct: 63 HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYV----NGLK---QIYE 113
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A +++GAGGA K +A K + IANRT R + LS A
Sbjct: 114 GIEDAY----ILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNSNKINLSHA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE
Sbjct: 170 ERHLDEFD-----IIINTTPAGMYGNKDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ G I +GL+MF+ Q E ++ +T L + A
Sbjct: 224 QKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEA 256
>gi|293553506|ref|ZP_06674134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430833289|ref|ZP_19451302.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430835984|ref|ZP_19453969.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|431295209|ref|ZP_19507097.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|431767006|ref|ZP_19555466.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
gi|291602383|gb|EFF32607.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430486744|gb|ELA63580.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430488824|gb|ELA65472.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|430581299|gb|ELB19744.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|430631879|gb|ELB68179.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
Length = 284
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|430822290|ref|ZP_19440869.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430864786|ref|ZP_19480611.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|431743724|ref|ZP_19532600.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
gi|430443348|gb|ELA53333.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430553567|gb|ELA93253.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|430606513|gb|ELB43864.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
Length = 284
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHEDLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|281420647|ref|ZP_06251646.1| shikimate dehydrogenase [Prevotella copri DSM 18205]
gi|281405420|gb|EFB36100.1| shikimate dehydrogenase [Prevotella copri DSM 18205]
Length = 248
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 135/261 (51%), Gaps = 26/261 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + +++ + I + SN + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSKNYFNEKFENEGIDAQYINFEIPSIENLTEILDSNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCII--RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + D V A +IGAVN I R D L GYN+D +G +IE +
Sbjct: 64 KEKVISYLDVVSPEANAIGAVNVIKVEHRGEDVYLKGYNSDVIGFTKSIEPYIEPY---- 119
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ +G K+ G +R Y+R T+ ++
Sbjct: 120 --------HKKALILGTGGASKAINFGLKSLGLETAFVSR-YERPG----TIQYEKITPE 166
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
++ +N ++ N T +GM P VDE P +P A+ + L++D +Y P T +++ +E
Sbjct: 167 VIKEYN-----VIVNCTPVGMYPHVDECPALPYEAMDSHTLLYDLIYNPDETLFMKKGKE 221
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
GAT+ +GLEM + QA+ ++
Sbjct: 222 HGATVKNGLEMLLLQAFASWD 242
>gi|373500632|ref|ZP_09591009.1| hypothetical protein HMPREF9140_01127 [Prevotella micans F0438]
gi|371952794|gb|EHO70628.1| hypothetical protein HMPREF9140_01127 [Prevotella micans F0438]
Length = 248
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 40/272 (14%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F + + +++ + I + SSN G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFANENIDAQYINFEIPSIDNLVEVLSSNPQLRGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVS 372
KE ++ D + A++IGAVN I Q + F G+N+D +G +IE L R +
Sbjct: 64 KEQVIRYLDSISPEAQAIGAVNVIRVSQKGNQTFLRGFNSDVIGFTKSIEPLLE-RYHRK 122
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR-------TYDRARELAETVG 425
+++G GGA KA+ YG K+ G + +R TYD + AET+
Sbjct: 123 A-----------LILGTGGAAKAVDYGLKSLGLETQMVSRSRKTGAITYDDVK--AETI- 168
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITR 484
E +N +L N T +G+ P VD P +P +A+ L++D +Y P T
Sbjct: 169 ---------EEYN-----VLVNCTPLGLYPNVDLCPALPYNAMNSRTLLYDLLYNPDETL 214
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+R+ E GAT+ +GLEM + QA+ +E + G
Sbjct: 215 FMRKGREQGATVKNGLEMLLLQAFASWEFWNG 246
>gi|227551431|ref|ZP_03981480.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257895956|ref|ZP_05675609.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
gi|227179440|gb|EEI60412.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257832521|gb|EEV58942.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
Length = 284
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA+ ++ N+T+ + +E E +
Sbjct: 118 ---GIS--VKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K+D++P+ + H L VFD +
Sbjct: 173 RTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPSETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|198276468|ref|ZP_03208999.1| hypothetical protein BACPLE_02663 [Bacteroides plebeius DSM 17135]
gi|198270556|gb|EDY94826.1| putative shikimate dehydrogenase [Bacteroides plebeius DSM 17135]
Length = 247
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 31/266 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K FG+IG P+GHS S +NE F S + +V+ + I + +N AG + TI
Sbjct: 2 KKFGLIGYPLGHSFSRNFFNEKFHSENIDAEYVNFEIPSIDELPHIIQANPSLAGLNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG--KLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + DE+D A+ IGAVN I + G KL GYN+D +G + +IE L
Sbjct: 62 PYKEKVISYLDELDKDAREIGAVNVIKVEHTKGGTKLKGYNSDIIGFVRSIEALLEPY-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+ G K G V+ +R ++ ++ T
Sbjct: 120 ----------HKKALILGTGGASKAIHQGLKQLGLEVLFVSR--NKHNDMTITY------ 161
Query: 431 LADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLL 486
E PE + ++ N T +GM PK DE P IP L L++D +Y P T +
Sbjct: 162 ----EEITPEIMQEYKVIVNCTPVGMYPKADECPNIPYELLTPQHLLYDLLYNPNTTLFM 217
Query: 487 REAEESGATIVSGLEMFIGQAYEQYE 512
++ + GA + +GLEM + QA+ ++
Sbjct: 218 KKGSDQGAIVKNGLEMLLLQAFGAWD 243
>gi|145577949|gb|ABP82693.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tohokuensis]
Length = 238
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 138/247 (55%), Gaps = 18/247 (7%)
Query: 266 SKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
S SP+++N+AF+ + + + LV++ + + + + +GF+ T PHK + +K D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
E+D +AK IGAVN ++ R D KL GYNTD +G + +++ ++S L K
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DRKLIGYNTDGIGYVRSLQ-------SIS---KEPLYQKR 108
Query: 384 FVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLA-DLENFNPED 441
+++GAGGA +A+ + G + + IANRT ++A L S A LE E
Sbjct: 109 ILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATEEQ 168
Query: 442 GM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG 499
G I+ +TT+IGM P + TP+ +L +V D +Y P T+LL++A+ GA + +G
Sbjct: 169 GNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAKGAIVQNG 228
Query: 500 LEMFIGQ 506
++MF+ Q
Sbjct: 229 IDMFVYQ 235
>gi|153953639|ref|YP_001394404.1| shikimate 5-dehydrogenase [Clostridium kluyveri DSM 555]
gi|146346520|gb|EDK33056.1| AroE3 [Clostridium kluyveri DSM 555]
Length = 289
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T + G+IG PV HSKSP++YN F+ + + V++ V + + + G +
Sbjct: 9 TGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMKGSNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRL 369
T+P K VK DE+ A+ IGAVN I+ +GKL G+ TD VG + ++ E+G+
Sbjct: 69 TMPCKSEVVKYMDELSPAARIIGAVNTIV--NDNGKLTGHITDGVGFVRSLKEEGVE--- 123
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVG 425
+ GK ++G+GGA A+ G++ + I + Y+RA++ ET+
Sbjct: 124 ---------VKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKNVETIK 174
Query: 426 GHA-------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-D 475
L D E N E IL N T +GM P DE+ I ++ LV D
Sbjct: 175 KEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKELVVAD 234
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+ L+ AE +G IV GL M + Q E ++ +TGL
Sbjct: 235 TVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGL 276
>gi|303249289|ref|ZP_07335521.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
gi|302489295|gb|EFL49252.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
Length = 270
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 22/268 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSC 310
++VFGIIG P+GH+ SP+++N FK G + L +++ F G S
Sbjct: 2 SRVFGIIGHPLGHTLSPLVHNWGFKRFGIKARYEAWPTLPEELGAFMVRLRETPVEGLSV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK + D V + +S+GAVN + R DG+L+ NTD G + LRG
Sbjct: 62 TIPHKTPVMAYVDAVTDLGRSVGAVNTLYWR--DGELWAENTDVEGFCRPLV--LRG--- 114
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
+A + +++G GG +A G G R+ + R+ ++A LA G L
Sbjct: 115 --------IAPRAALILGCGGVARAAVAGLVRLGVERLAVTGRSAEKAAVLAGEFG---L 163
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDE-TPIPKHALGHYALVFDAVYTPKITRLLRE 488
D + +L N T +GM +++ +P P ALG +V+D VYTP T +
Sbjct: 164 ERVDWDRRADFPAGLLVNATPMGMTGRLEGLSPYPAEALGPDHVVYDLVYTPDPTHFGAD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A +G +VSG+EMF+ QA EQ+ +TG
Sbjct: 224 ALAAGGLVVSGMEMFLYQAVEQFRLWTG 251
>gi|448338817|ref|ZP_21527852.1| shikimate 5-dehydrogenase [Natrinema pallidum DSM 3751]
gi|445621292|gb|ELY74768.1| shikimate 5-dehydrogenase [Natrinema pallidum DSM 3751]
Length = 267
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 145/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G + DDI + + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+AA++ D +A IGAVN I S G GYNTD +GA+ A+ +
Sbjct: 62 IPFKQAALELVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAIGALRALREH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
AL G+ VV+GAGGAG+A+A+G GA V +ANRT A +LA V GH
Sbjct: 113 ----DVALEGEQAVVVGAGGAGRAIAFGLADAGATVAVANRTESTAHDLAAAVPRATGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE D +L N TS+GM D TP+P+ AL V DAVY+P TRLLR+
Sbjct: 168 -GLAALEELL-ADADVLVNATSVGMD--ADATPVPEDALHEGLAVLDAVYSPLETRLLRD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A ++GAT + G M + Q E +E +TG
Sbjct: 224 AADAGATTIDGAWMLLYQGVEAFEIWTG 251
>gi|425054313|ref|ZP_18457820.1| shikimate dehydrogenase [Enterococcus faecium 505]
gi|403036076|gb|EJY47444.1| shikimate dehydrogenase [Enterococcus faecium 505]
Length = 284
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 146/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANDIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IEKKKMTLLGAGGASKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENFNPEDGM--------ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F D + +L N T IGM K++++P+ + H L VFD +
Sbjct: 173 RTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKINQSPLLDINMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YEPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|150398403|ref|YP_001328870.1| shikimate 5-dehydrogenase [Sinorhizobium medicae WSM419]
gi|229504033|sp|A6UEF5.1|AROE_SINMW RecName: Full=Shikimate dehydrogenase
gi|150029918|gb|ABR62035.1| shikimate 5-dehydrogenase [Sinorhizobium medicae WSM419]
Length = 286
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 27/270 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTYSSNDFAGF---SCTIP 313
+ G PV HS+SP+++ K G G + H + D F AGF + TIP
Sbjct: 14 VAGYPVKHSRSPLIHGYWLKRFGIQGSYRAHEVTSDAFPDFMRQIKEGTAGFCGGNVTIP 73
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA + D D ++ +GA N + +G + NTD G ++ +++ +G +S
Sbjct: 74 HKEAAFRLSDRPDELSAELGAANTLW--LENGTIRATNTDGRGFVANLDERAKGWDRISA 131
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG--HALS 430
V ++GAGGA +A+ + +G + + + NRT +RARELA+ G HA S
Sbjct: 132 AV----------ILGAGGASRAVIQAIRDRGVKAIHVVNRTPERARELADRFGSAVHAHS 181
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLR 487
+A L G+ + NTTS+GM D P P L A+V D VY P T LLR
Sbjct: 182 MAALPEVLSGAGLFV-NTTSLGM----DGEPAPAIDFSKLARDAVVTDIVYVPLKTPLLR 236
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+AEE G +V GL M + QA +E++ GL
Sbjct: 237 QAEEQGFRVVDGLGMLLHQAAPGFEKWFGL 266
>gi|299535724|ref|ZP_07049045.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|424739107|ref|ZP_18167529.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZB2]
gi|298728924|gb|EFI69478.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|422946972|gb|EKU41374.1| shikimate dehydrogenase [Lysinibacillus fusiformis ZB2]
Length = 276
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 145/267 (54%), Gaps = 16/267 (5%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K F ++G P+ HSKSP ++N F+ + + ++ H+ D + + +G++ T
Sbjct: 3 KWFAVMGDPIEHSKSPAMHNAWFEDMSIDATYIPLHVTPDQLESAVAGLKTLGASGWNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DE+D +A+ +GAVN ++R + GKL GYNTD +G + ++E+ +
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TKGKLKGYNTDGIGFVRSLEEAV------ 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHAL 429
GVS K +++GAGGA + +A+ + +G V IANRT A+ + + +G G A+
Sbjct: 116 --GVSHK--DKPVLLVGAGGAARGIAFAMQQQGYCHVTIANRTVTNAQMIIDEMGMGRAI 171
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SL E D I+ TS G+ P L A+V D VY P +T L+ A
Sbjct: 172 SLQQAEE-TLADFSIIVQMTSAGLSTGNFSMPFSLDRLMKEAIVADIVYNPLMTPFLQAA 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
EE GATIV+GL MF+ Q +E + G
Sbjct: 231 EEKGATIVTGLGMFVHQGAIAFEHWLG 257
>gi|116252592|ref|YP_768430.1| shikimate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257240|emb|CAK08335.1| putative shikimate dehydrogenase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 280
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 133/266 (50%), Gaps = 28/266 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
++G P+ HS+SP+L+ K G G + L V DI FF + + G + T+PHK
Sbjct: 8 VMGHPIAHSRSPMLHGYWLKRCGIEGSYERLDVPPQDIDSFFSGFREAGWIGGNITVPHK 67
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
A + D +D A+ +GAVN I DG L G NTD +G + I++ G
Sbjct: 68 TAVIPHLDHIDDAARKMGAVNTIW--WEDGVLVGGNTDAIGFLGNIDELAPGWDK----- 120
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
GK V++GAGGA +A YG ++G V + NRT +A LA G A A
Sbjct: 121 -----GKRAVILGAGGATRAATYGLLSRGLTVALCNRTVSKAEALASHFG--AGVSAHGM 173
Query: 436 NFNPE---DGMILANTTSIGM--QP--KVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
N PE + +L NTTS+GM QP +D +P+ K A+V+D +Y P T L++
Sbjct: 174 NALPELIAECDLLVNTTSLGMIGQPPLDIDLSPLKKD-----AIVYDVIYVPLETELIKA 228
Query: 489 AEESGATIVSGLEMFIGQAYEQYERF 514
A+ G V GL M + Q + R+
Sbjct: 229 AKARGHRSVDGLGMLLHQGVVGFNRW 254
>gi|219854261|ref|YP_002471383.1| hypothetical protein CKR_0918 [Clostridium kluyveri NBRC 12016]
gi|219567985|dbj|BAH05969.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 296
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T + G+IG PV HSKSP++YN F+ + + V++ V + + + G +
Sbjct: 16 TGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMKGSNV 75
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRL 369
T+P K VK DE+ A+ IGAVN I+ +GKL G+ TD VG + ++ E+G+
Sbjct: 76 TMPCKSEVVKYMDELSPAARIIGAVNTIV--NDNGKLTGHITDGVGFVRSLKEEGVE--- 130
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVG 425
+ GK ++G+GGA A+ G++ + I + Y+RA++ ET+
Sbjct: 131 ---------VKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKNVETIK 181
Query: 426 GHA-------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-D 475
L D E N E IL N T +GM P DE+ I ++ LV D
Sbjct: 182 KEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKELVVAD 241
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+ L+ AE +G IV GL M + Q E ++ +TGL
Sbjct: 242 TVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGL 283
>gi|60680389|ref|YP_210533.1| shikimate 5-dehydrogenase [Bacteroides fragilis NCTC 9343]
gi|265765542|ref|ZP_06093817.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_1_16]
gi|336408425|ref|ZP_08588918.1| hypothetical protein HMPREF1018_00933 [Bacteroides sp. 2_1_56FAA]
gi|375357242|ref|YP_005110014.1| putative shikimate 5-dehydrogenase [Bacteroides fragilis 638R]
gi|383117158|ref|ZP_09937905.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_2_5]
gi|423248876|ref|ZP_17229892.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL03T00C08]
gi|423253825|ref|ZP_17234756.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL03T12C07]
gi|423258790|ref|ZP_17239713.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL07T00C01]
gi|423264238|ref|ZP_17243241.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL07T12C05]
gi|423269197|ref|ZP_17248169.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL05T00C42]
gi|423273239|ref|ZP_17252186.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL05T12C13]
gi|423281891|ref|ZP_17260776.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 615]
gi|60491823|emb|CAH06581.1| putative shikimate 5-dehydrogenase [Bacteroides fragilis NCTC 9343]
gi|251947528|gb|EES87810.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_2_5]
gi|263254926|gb|EEZ26360.1| shikimate 5-dehydrogenase [Bacteroides sp. 2_1_16]
gi|301161923|emb|CBW21467.1| putative shikimate 5-dehydrogenase [Bacteroides fragilis 638R]
gi|335937903|gb|EGM99799.1| hypothetical protein HMPREF1018_00933 [Bacteroides sp. 2_1_56FAA]
gi|387776370|gb|EIK38470.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL07T00C01]
gi|392655454|gb|EIY49097.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL03T12C07]
gi|392657817|gb|EIY51448.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL03T00C08]
gi|392701619|gb|EIY94776.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL05T00C42]
gi|392706504|gb|EIY99627.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL07T12C05]
gi|392708271|gb|EIZ01379.1| shikimate 5-dehydrogenase [Bacteroides fragilis CL05T12C13]
gi|404582378|gb|EKA87072.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 615]
Length = 247
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGFFNEKFKSEGIDAEYVNFEIPEINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI--IRR-QSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I IR + KL GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDKDTAKIGAVNVIKIIRTPKRKIKLVGYNSDIIGFSQSIQPLLQPY--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GG+ KA+ +G K G V +RT +
Sbjct: 121 ---------HKKALILGTGGSSKAIYHGLKNLGIDSVFVSRTKKEG-------------M 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P IT ++
Sbjct: 159 LTYEELTPEVMAEHTVIVNCTPVGMYPKVDFCPAIPYELLTPNHLLYDLLYNPNITLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEEHGAVTKNGLEMLLLQAFAAWE 243
>gi|150400570|ref|YP_001324336.1| 3-dehydroquinate dehydratase [Methanococcus aeolicus Nankai-3]
gi|166219201|sp|A6UTA2.1|AROD_META3 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|150013273|gb|ABR55724.1| 3-dehydroquinate dehydratase, type I [Methanococcus aeolicus
Nankai-3]
Length = 218
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 18/228 (7%)
Query: 25 LICVPIMGESVDKMVVDMGKANASG---ADLVEIRLDGLKNFNPRENIKTLIKESPVPTL 81
+IC+P+ +DK + D K+ AD+VE R D L++ + +++I+ + K P++
Sbjct: 1 MICIPV----IDKNINDALKSAEEALKVADIVEFRADLLESVD-KQDIEKMAK---YPSI 52
Query: 82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCK 138
T R WEGG+Y GD N+R+++ + A+E +ID+EL+ E N + R K K K
Sbjct: 53 ITIRADWEGGEYTGDNNKRIELYKTAIENNVKFIDIELK--EEKNKELVEFRNKIGSKTK 110
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
+IVS H+++ TPS +DL +V + + DI KFAT A + D+ ++F + + IIG
Sbjct: 111 IIVSYHDFEKTPSKQDLMEIVEK-ELKIGDIAKFATMAQNKNDLLKIFAVISIYEGKIIG 169
Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
+ MGE G ++RI+ + G LTF ++E G SAPGQ + L ++
Sbjct: 170 IGMGEVGKLTRIIGVELGSILTFASME-GRSSAPGQVDVVKLKKIWEL 216
>gi|294673464|ref|YP_003574080.1| shikimate dehydrogenase [Prevotella ruminicola 23]
gi|294472935|gb|ADE82324.1| shikimate dehydrogenase [Prevotella ruminicola 23]
Length = 248
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 25/261 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +N+ F G N + + + I + + N + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSISYFNQKFADEGINAKYENFEIPTIDELPEIIDRNPNLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI--IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + D + A++IGAVN I + ++ L GYN+D +G +IE L + +
Sbjct: 64 KEKVIPFLDSISPEARAIGAVNVIRVVHEKNKTLLKGYNSDVIGFTQSIESMLDPKWH-- 121
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ +G K+ G V +R Y+R +T+ + ++
Sbjct: 122 ---------KKALILGTGGASKAINFGLKSLGIEPVFVSR-YERP----DTIQYNQITPE 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
++ +N ++ N T +GM PK DE P +P A+ + +++D +Y P T +R+ +
Sbjct: 168 VIKEYN-----VIVNCTPLGMYPKTDECPDLPYEAMNSHTILYDLIYNPDQTLFMRKGAK 222
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
GA + +GLEM + QA+ +E
Sbjct: 223 YGAEVKNGLEMLLLQAFASWE 243
>gi|379795954|ref|YP_005325952.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872944|emb|CCE59283.1| shikimate 5-dehydrogenase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 268
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 138/274 (50%), Gaps = 20/274 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP +++ FKS+G + + +++ V+D + S GF+ TIP
Sbjct: 3 FAVIGSPIEHSLSPSMHSANFKSLGLDYTYDALNIPVEDFHLIKEIISEKKLNGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + D +D A GAVN ++ ++ GK GYNTD +G + +
Sbjct: 63 HKERIMPYLDIIDEQAIIAGAVNTVLIKE--GKWIGYNTDGIGYVKGLYQ---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K + Y +K ++ +ANRT R V + ++L
Sbjct: 111 -VYPDLENAYILILGAGGASKGITYELSKIVKHKLTVANRTMSRFESWNLDV--NQITLN 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM D KH L ALV D VY P T +L +AEE
Sbjct: 168 DAEMYLDEFDIVI-NTTPAGMAENNDSIIELKH-LSQNALVSDIVYIPYKTPILLKAEEK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHL 526
G I +GL+MFI Q E ++ +TG +N L
Sbjct: 226 GNPIYNGLDMFIYQGAESFKIWTGKEADINCMKL 259
>gi|189461841|ref|ZP_03010626.1| hypothetical protein BACCOP_02507 [Bacteroides coprocola DSM 17136]
gi|189431435|gb|EDV00420.1| putative shikimate dehydrogenase [Bacteroides coprocola DSM 17136]
Length = 247
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 25/263 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
K FG+IG P+GHS S +NE F+S + +V+ + I F Q SN G + TI
Sbjct: 2 KKFGLIGYPLGHSFSRNFFNEKFQSENIDAEYVNFEIPTIEDFPQVIVSNPTLEGLNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG--KLFGYNTDYVGAISAIEDGLRGRLN 370
P+KE + +E+ A +IGAVN I ++ G KL G+N+D +G +IE L
Sbjct: 62 PYKEKVIPFLNELTPDAAAIGAVNVIKFERNKGKLKLIGHNSDVIGFTRSIEPLLESFHT 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ +++G GGA KA+ YG K G + +R+ H ++
Sbjct: 122 KA------------LILGTGGASKAINYGLKTLGIETLFVSRSAHNE---------HTIT 160
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++L ++ I+ N T +GM P+ D+ P IP L L++D +Y P T +R+
Sbjct: 161 YSELTPEIMDEYKIIVNCTPVGMYPQADKCPEIPYEYLTPRHLLYDLLYNPNTTLFMRKG 220
Query: 490 EESGATIVSGLEMFIGQAYEQYE 512
E GA + +GLEM + QA+ ++
Sbjct: 221 SEHGAVVKNGLEMLLLQAFGAWD 243
>gi|53712209|ref|YP_098201.1| shikimate 5-dehydrogenase [Bacteroides fragilis YCH46]
gi|52215074|dbj|BAD47667.1| shikimate 5-dehydrogenase [Bacteroides fragilis YCH46]
Length = 247
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGFFNEKFKSEGIDAEYVNFEIPEINDFMEVVEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI--IRR-QSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I IR + KL GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDKDTAKIGAVNVIKIIRTPKRKIKLVGYNSDIIGFSQSIQPLLQPY--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GG+ KA+ +G K G V +RT +
Sbjct: 121 ---------HKKALILGTGGSSKAIYHGLKNLGIDSVFVSRTKKEG-------------M 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P IT ++
Sbjct: 159 LTYEELTPEVMAEHTVIVNCTPVGMYPKVDFCPAIPYELLTPNHLLYDLLYNPNITLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEEHGAVTKNGLEMLLLQAFAAWE 243
>gi|58263434|ref|XP_569127.1| aromatic amino acid family biosynthesis-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134108382|ref|XP_777142.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817572|sp|P0CM23.1|ARO1_CRYNB RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|338817573|sp|P0CM22.1|ARO1_CRYNJ RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|50259827|gb|EAL22495.1| hypothetical protein CNBB3730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223777|gb|AAW41820.1| aromatic amino acid family biosynthesis-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1611
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 227/515 (44%), Gaps = 49/515 (9%)
Query: 49 GADLVEIRLDGLKNFNPR-------------ENIKTLIKESPVPTLFTYRPIWEGGQYDG 95
GAD VE R+D L + + +L + +P +F+ R +GG
Sbjct: 1112 GADAVEFRVDLLSTTGQAPTRPALPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVPS 1171
Query: 96 DENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ----YTP 150
D E L RL + +Y+D+E+ + DSI K E +I S H++ +
Sbjct: 1172 DNAEAYGALVRLGLRCACEYVDLEVCWPEQLLDSIVQLKRE-THIIASWHDWTGDMAWDG 1230
Query: 151 SVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV---PIIGLVMGERGLI 207
+++ A IV A + LD +A +F V S P++ + MG G +
Sbjct: 1231 EEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLA-IFVGEVQSHPGAKPLLAINMGAAGQL 1289
Query: 208 SRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSK 267
SRIL +T L + +APGQ T +++L P K F + G P+ HS
Sbjct: 1290 SRILNPILTP-VTHDALPSR--AAPGQLTAREILQARALTGSLP-AKKFVLFGSPIAHSV 1345
Query: 268 SPILYNEAFKSVGFNGVF-VHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326
SP+L+N F ++G + +H + S DF G S TIP K + D V
Sbjct: 1346 SPLLHNAGFATLGLPHTYRLHESEKVDQGVLEVIRSPDFGGASVTIPLKLDIIPHLDSVS 1405
Query: 327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVV 386
AK IGAVN +I R GKL G NTD+ A L +S G S+AL V
Sbjct: 1406 EDAKIIGAVNTVIPR--GGKLHGENTDWQAIHQAAAQNLDAD-ALSYGSSTAL------V 1456
Query: 387 IGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLADLENFN--PEDGM 443
IGAGG +A Y K + + + NRT + A ++ + + ++A + + + PE +
Sbjct: 1457 IGAGGTCRAAIYAMHKLRFKTIYLFNRTPENAAKVKASF-PESYNIAVVTSLSSLPEAPV 1515
Query: 444 ILANT---TSIGMQPKVDETPIPKHALGH-YALVFDAVYTPKITRLLREAE-ESGATIVS 498
++ +T S+ + +P L + D Y P +T LL AE + G +V
Sbjct: 1516 VVVSTVPGNSLTLDTFSQGIYLPSEVLSRPKGVAIDLAYKPHMTALLHAAEKKEGWKVVP 1575
Query: 499 GLEMFIGQAYEQYERFTGLPG---KMNAPHLYKFF 530
G+E+ Q ++Q+E +TG KM L K+F
Sbjct: 1576 GVEILCLQGFKQFEEWTGKRAPQKKMRKAVLDKYF 1610
>gi|289550633|ref|YP_003471537.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis HKU09-01]
gi|385784261|ref|YP_005760434.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|418413937|ref|ZP_12987153.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180165|gb|ADC87410.1| Shikimate 5-dehydrogenase I alpha, AroDI alpha [Staphylococcus
lugdunensis HKU09-01]
gi|339894517|emb|CCB53798.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|410877575|gb|EKS25467.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 271
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK++ + +H+ + + + GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPLMHNANFKALNMRHTYEAIHVPREHFHHIKDIIAEKEIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEA + D +D AK+IGAVN I +Q GK GYNTD +G ++ ++
Sbjct: 63 HKEAIIPYLDVIDDTAKNIGAVNTIAIKQ--GKWIGYNTDGIGYVTGLKH---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ + +++GAGGA K +A+ K ++ IANRT R V +L A
Sbjct: 111 -IYPDIEHAYILILGAGGASKGIAHELIKYVEPKITIANRTAKRFDSWTLDVNKISLETA 169
Query: 433 DLENFNPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ + N D I+ NTT +GM Q K + L LV D VY P T L +AE+
Sbjct: 170 E-RHLNQFD--IIINTTPVGMSQSKASVVSLSN--LSPQTLVSDIVYIPAKTPFLDQAEQ 224
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
+G I +GL+MFI Q + +TG +N
Sbjct: 225 NGNPIYNGLDMFILQGAASFNIWTGQTANIN 255
>gi|68466574|ref|XP_722769.1| hypothetical protein CaO19.4704 [Candida albicans SC5314]
gi|74591846|sp|Q5AME2.1|ARO1_CANAL RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|46444766|gb|EAL04039.1| hypothetical protein CaO19.4704 [Candida albicans SC5314]
Length = 1551
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 227/492 (46%), Gaps = 44/492 (8%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
GAD VE+R+D K+ + I + K + +P ++T R + +GG++ D + +E +L
Sbjct: 1067 GADAVELRVDLFKDTSAEFVAAQIAVIRKHADLPIIYTVRTMSQGGKFPDENVDELKSLL 1126
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH--NYQYTPSVEDLSNLVARI 162
L + LG Y+D++L E + I KK +VI + N + + + N +
Sbjct: 1127 LLGIRLGVAYVDLQLTAPNELIEEISSKK-GFTRVIGTYQDINGELKWNNVEWKNKYNQG 1185
Query: 163 QASGADIVKFATTALDITDVARVFQITVHSQV-PIIGLVMGERGLISRILCAKFGGFLTF 221
+ ADIV+ A I D + + + P+I +G +G +S++L TF
Sbjct: 1186 VSMNADIVRLVGKANSIQDNLDLENFKKQNTLKPLIAFNLGSQGKLSQVLNG------TF 1239
Query: 222 GTLENGIVSAPGQ-PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
+ + ++ + TI +L Y F G K F +IG P+ HS+SP L+N +K++
Sbjct: 1240 TPISHKLLPNDEEFLTIGELNQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALN 1298
Query: 281 FNGVFVHLLVDDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII 339
F D+ + + DF G + T+P K +K ++ A++IGAVN +I
Sbjct: 1299 LPYQFGRFEATDVDVVYDNLINKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI 1358
Query: 340 RRQSDGKLFGYNTDYVG-AISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY 398
+G FG NTD+VG + S I G+ + + +G +V+GAGG +A Y
Sbjct: 1359 --PIEGGYFGDNTDWVGISNSFIRAGVPPKSSSNG-----------LVVGAGGTSRAAIY 1405
Query: 399 GAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGMILANTTSIGMQPK 456
G A++ + NRT + EL ++ + L + + E + + + I
Sbjct: 1406 ALHQMGCAKIYLVNRTAAKLEELVKSFPKDYNLEIVETEQQADKASKVSLAVSCIPADKP 1465
Query: 457 VDETPIPK----------HALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIG 505
+D + K + G + +A Y P++T +++ AEE ++ G+EM +
Sbjct: 1466 LDGEVLKKIERILSNGSEQSAGFKPTLLEASYKPRVTPIMKLAEEQYKWKVIPGVEMLVN 1525
Query: 506 QAYEQYERFTGL 517
Q Q++ TG
Sbjct: 1526 QGDRQFKLHTGF 1537
>gi|417897101|ref|ZP_12541044.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21235]
gi|341840367|gb|EGS81887.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus 21235]
Length = 268
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++ F S+G + + +++ ++D + S + GF+ TIP
Sbjct: 3 FAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE + D VD A + GAVN ++ + DGK GYNTD +G + +
Sbjct: 63 YKERIIPYLDHVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLH----------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K +AY AK ++ +ANRT AR + + + +SLA
Sbjct: 110 SVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRT--MARFESWNLNVNQISLA 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D E + E +++ NTT GM +E+ I L L+ D +Y P T +L AE
Sbjct: 168 DAEKYLAEFDIVI-NTTPAGMAGN-NESIINLKHLSPNTLMSDIIYIPYKTPILEVAERK 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G I +GL+MF+ Q E ++ +T +N+
Sbjct: 226 GNHIYNGLDMFVYQGAESFKIWTNKDADINS 256
>gi|282859528|ref|ZP_06268633.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|424900957|ref|ZP_18324499.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
gi|282587756|gb|EFB92956.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|388593157|gb|EIM33396.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
Length = 249
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 25/265 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G N +++ + I + + N + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFQNEGINAKYINFEIPSIEDLTEILALNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI--IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
KE + DE+ AK+IGAVN I R+ L G+N+D +G +IE L +
Sbjct: 64 KEQIIPYLDEISPEAKAIGAVNVIRITRKGHKTILKGFNSDVIGFTQSIEPLLMPHWH-- 121
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +V+G GGA KA+ YG K+ G + +R + + E + ++
Sbjct: 122 ---------KKALVLGTGGAAKAINYGLKSLGLDTKLVSR-----KPMLEEISYEKITPE 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
++++N ++ N T +GM P V+ P +P A+ +++D +Y P T +++
Sbjct: 168 IIKDYN-----VIVNCTPLGMYPNVETCPKLPYEAMNTKTILYDLIYNPDQTLFMKKGAA 222
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
GAT+ +GLEM + QA+ +E + G
Sbjct: 223 QGATVKNGLEMLLLQAFASWEFWHG 247
>gi|255656694|ref|ZP_05402103.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-23m63]
gi|296451777|ref|ZP_06893503.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296880095|ref|ZP_06904063.1| shikimate dehydrogenase [Clostridium difficile NAP07]
gi|296259387|gb|EFH06256.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296428909|gb|EFH14788.1| shikimate dehydrogenase [Clostridium difficile NAP07]
Length = 287
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +F+ + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFEKLDLDYRYLAFDITVDKVKEALSAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + +++
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKEN------ 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
+ GK ++GAGGA A+ GAR + + Y RA + E +
Sbjct: 119 -----EVEVKGKKVTIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQTVENIKK 173
Query: 427 HA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
++L DLE+ N E IL N T IGM+P +ET I ++ LV D
Sbjct: 174 EVPKCIVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDV 233
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY P+ T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 234 VYNPRKTKMIEDAESNGCKAIGGLGMLLYQGAESFNLYTGL 274
>gi|206889174|ref|YP_002248270.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226697499|sp|B5YJ55.1|AROE_THEYD RecName: Full=Shikimate dehydrogenase
gi|206741112|gb|ACI20169.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 275
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 142/266 (53%), Gaps = 19/266 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GI G P+ H+ SP+++NEAF +G + +V V D + + + + + G +
Sbjct: 6 TKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIRGVNI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKE ++ DE+ K+IGAVN I+ ++G L G+NTD G I +++D
Sbjct: 66 TVPHKETVIQYIDELSDEVKNIGAVNTIL--NNEGILKGFNTDVNGFILSLKDE------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-L 429
G+S + K F+++GAGGA KA+ YG +G +V I NRT A + E +
Sbjct: 118 ---GIS--MKNKNFLILGAGGAAKAIVYGILKEGGKVYIYNRTPSNALAIKEKFKKFGFI 172
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
+ +++ E ++ N TS+G++ K D P+ + + D VY T L+REA
Sbjct: 173 EIVEMDKSVTEKIDVIVNATSLGLK-KDDPMPLNPELIKPEHVYCDIVYPE--TPLMREA 229
Query: 490 EESGATIVSGLEMFIGQAYEQYERFT 515
E G +V G+ M + QA ++ +T
Sbjct: 230 ERIGCKVVGGIGMLLWQAAFAFKIWT 255
>gi|163757472|ref|ZP_02164561.1| shikimate 5-dehydrogenase protein [Hoeflea phototrophica DFL-43]
gi|162284974|gb|EDQ35256.1| shikimate 5-dehydrogenase protein [Hoeflea phototrophica DFL-43]
Length = 284
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYS--SNDFAGFSCTIP 313
+IG P+ HS+SP+++ ++ G G + VH+ D+ +F ++ +AG + T+P
Sbjct: 13 VIGDPISHSRSPLIHRHWLETAGIKGSYDPVHIRESDLKRFVAALKDGTSSYAGGNVTLP 72
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HK+A D +D AK IGAVN + G+L NTD G SA D L +
Sbjct: 73 HKQAIADLVDNIDETAKQIGAVNTVWLEA--GRLCATNTDSHG-FSANLDELEPGWD--- 126
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALS 430
GK VV GAGGA +A+ + KA+G + I NRT RA+EL++ GG A S
Sbjct: 127 ------RGKTAVVFGAGGASRAILHALKARGFTSIRIVNRTLARAQELSDRFGGGVSAHS 180
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLR 487
+ +L++ + + NTTS+GM TP+P L ALV D VY P +T ++
Sbjct: 181 IDELDDVS-SGANLFVNTTSLGMG----GTPVPDIDFSRLATGALVTDIVYVPLVTPIMA 235
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
A G V GL M + QA +E++ G
Sbjct: 236 MAASQGLATVDGLGMLLHQAAPGFEKWFG 264
>gi|448342902|ref|ZP_21531846.1| shikimate 5-dehydrogenase [Natrinema gari JCM 14663]
gi|445624483|gb|ELY77865.1| shikimate 5-dehydrogenase [Natrinema gari JCM 14663]
Length = 267
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 145/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G + DDI + + AG + T
Sbjct: 2 DVYGLVGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+AA++ D +A IGAVN I S G GYNTD +GA+ A+ +
Sbjct: 62 IPFKQAALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAIGALRALREH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
AL G+ VV+GAGGAG+A+A+G GA V IANRT +A +LA V GH
Sbjct: 113 ----DVALEGEQAVVVGAGGAGRAIAFGLTDAGATVAIANRTESKAHDLAAAVPRATGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE D +L N TS+GM D TP+P AL V DAVY+P TRLL++
Sbjct: 168 -GLAALEELL-ADADVLVNATSVGMD--ADATPVPADALHGDLAVLDAVYSPLETRLLQD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A ++GAT V G M + Q E +E +TG
Sbjct: 224 AADAGATTVDGAWMLLYQGVEAFEIWTG 251
>gi|313895569|ref|ZP_07829125.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975695|gb|EFR41154.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 286
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 135/278 (48%), Gaps = 29/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G++G P+ HS SP+L N A ++ G + V+V L V D + F GF+
Sbjct: 6 TKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKRDALRSAVLGLRDAGFCGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP K + D +D A+ IGAVN ++ +DG+L G+NTD G ++
Sbjct: 66 TIPFKTEIIAVLDALDEDARRIGAVNTVV-VGADGRLTGHNTDAAGFLAGF--------- 115
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
+ GVS L G VV+GAGGA +A+ G +A A+V I R + +L
Sbjct: 116 TACGVS--LRGAYVVVLGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCADFAAD-- 171
Query: 430 SLADLENFNPEDGM---------ILANTTSIGMQPKVDETPIPKHALGH-YALVFDAVYT 479
D+ F +D +L TT +GM P +E P A+ H A V+D +YT
Sbjct: 172 --GDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLIYT 229
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P TR LREA G V+G M Q E + +TG+
Sbjct: 230 PAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWTGV 267
>gi|294618196|ref|ZP_06697782.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|431499460|ref|ZP_19515039.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|431618722|ref|ZP_19522767.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
gi|291595544|gb|EFF26851.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|430588096|gb|ELB26301.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|430603872|gb|ELB41383.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
Length = 284
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELLT 270
>gi|339010605|ref|ZP_08643175.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
gi|338772760|gb|EGP32293.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
Length = 277
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 133/268 (49%), Gaps = 18/268 (6%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTI 312
+ G+ G+PVGHS SP+++N AF+ + V+D I + + + G + TI
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + D++D +A+ IGAVN I+ DG L GYNTD G + R L +
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIV--NEDGTLIGYNTDGTGYV-------RSLLEET 111
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A 428
G + L GA A K R+V NR+ +RA LA +G
Sbjct: 112 GIDLTEQTVTLLGAGGAARAVACTLVERGVKEIRIV--NRSLERAELLAMALGSQIPIRV 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
S A E +D +L NTTSIGM P + E P+ + L +V D +Y P T+LL+
Sbjct: 170 YSFAQAE-LAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQLLQC 228
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GAT SGL MFI Q YE +TG
Sbjct: 229 AKEIGATHHSGLGMFINQGALAYELWTG 256
>gi|347759215|ref|YP_004866777.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
gi|347591733|gb|AEP10775.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
Length = 280
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 144/273 (52%), Gaps = 21/273 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSC 310
T+ G+IG PV HS SP+++ + +G + + + DD++ + + + GF+
Sbjct: 2 TRKTGLIGHPVSHSLSPVIHTHWLQQYRIDGTYTAIDIAPDDLSTRVRALVDDGYVGFNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKE CD++D A+++GAVN + + G+L G+NTD G I+ ++
Sbjct: 62 TLPHKEEIAFLCDDLDDTAQAVGAVNTVT-IDNRGRLHGHNTDVDGFINHLK-------- 112
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
S L+GK VV+GAGGA +A+ Y + + + NRT +RA +A +
Sbjct: 113 -SSVPDFHLSGKHAVVLGAGGAARAVLYALLREDFEWITLINRTRERAVAVANDLDDDGR 171
Query: 430 SL-ADLENFNP--EDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITR 484
L D E D +L NTTS+GM Q +D + L A+V+D VY P +T
Sbjct: 172 VLIVDWEKRGGALADTDLLVNTTSLGMTGQAPLD---MDVGGLSPNAVVYDIVYRPLMTP 228
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LL++A+ G TIV+GL M + QA ++ + G+
Sbjct: 229 LLQQAKMRGNTIVTGLGMLLHQARPAFDAWYGV 261
>gi|238917253|ref|YP_002930770.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
gi|238872613|gb|ACR72323.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
Length = 290
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 26/288 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T+V G+IG PVGHS SP ++N + G + V+ V+ D+ + S + G +
Sbjct: 7 TRVCGLIGNPVGHSVSPAIHNNLARLTGKDMVYTTFKVEKGDVEAAVRGAYSLNILGLNV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHK + ++D +AK+IGAVN ++R +DG GYNTD +G +ED
Sbjct: 67 TVPHKSEVIDSLVDIDPLAKAIGAVNTLVR--ADGGFKGYNTDILGLARELED------- 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-- 427
G+ LA +++GAGGA +A+ + +KGA ++ + NR+ D+A+++A V H
Sbjct: 118 --EGIE--LADSKVIILGAGGAARAITFLCSSKGAKKIYLLNRSVDKAQDIAHAVNTHFN 173
Query: 428 -----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV-FDAVYTPK 481
+++AD + P D I+ TTS+G+ P I + A V D +Y P
Sbjct: 174 NEKVIPMNIADYADI-PGDDYIVIQTTSVGLHPNDTAVVIDDESFYKKAAVGVDIIYNPA 232
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP-GKMNAPHLYK 528
T ++ + G +GL+M + Q YE + K A +YK
Sbjct: 233 ETMFMKLIKAQGKKAYNGLKMLLYQGVSAYELWNDCKISKKEADEVYK 280
>gi|254472328|ref|ZP_05085728.1| shikimate 5-dehydrogenase [Pseudovibrio sp. JE062]
gi|211958611|gb|EEA93811.1| shikimate 5-dehydrogenase [Pseudovibrio sp. JE062]
Length = 277
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 145/266 (54%), Gaps = 19/266 (7%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+GHSKSP+++ K G G ++ V + F+ + + + F G + TIP+K
Sbjct: 6 VTGHPIGHSKSPLIHGYWLKQHGIEGSYIAQDVPPETAEGFYGSLAEHGFVGCNVTIPNK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A +++D AK IGAVN + ++ G L G NTD +G + ++ L N
Sbjct: 66 EHAYNSAEKLDDAAKMIGAVNTLWLDEA-GVLNGSNTDGLGFLGNLDQMLPNWDNY---- 120
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLA-D 433
G +V+GAGGA +A+ + ++G V IANRT ++A++LA+ G + +++ D
Sbjct: 121 -----GNKAIVLGAGGASRAIIWALLSRGYTEVYIANRTLEKAQKLADHFGPNTIAITWD 175
Query: 434 LENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ +L NTTS+GM QP+++ + L A+V D VY+P T+LLR++ E
Sbjct: 176 TLGEKLGEADLLVNTTSLGMTGQPELN---VDLDNLSKSAVVTDIVYSPLQTKLLRDSAE 232
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
G V GL M + QA +E++ G+
Sbjct: 233 RGNPTVDGLGMLLHQAVPGFEKWFGV 258
>gi|225849265|ref|YP_002729429.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643114|gb|ACN98164.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 280
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TKV+GI G PV HSKSP AF +G N V+V V +D+ K ++ AG +
Sbjct: 7 TKVYGIFGYPVKHSKSPTFQTAAFLHLGINAVYVPFEVNPNDLEKAVESLKVLKIAGVNI 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKE + +E+ K I A N I + DG L YNTD++G + +++
Sbjct: 67 TIPHKENVINYVNELSEEVKIIKAANTI--KNIDGYLIAYNTDWIGFVEGLKE------- 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-- 427
+ L K +VIGAGG+ +A+ YG + ++ +ANRT + L + H
Sbjct: 118 ----LEPNLEDKRVLVIGAGGSSRAVVYGLLRENVDKIYLANRTLPKVYNLIQEYKSHFR 173
Query: 428 -------ALSLADLENF-NPEDGMILANTTSIGMQPKVDETPIPKHA-LGHYALVFDAVY 478
+SL D+E F N D I+ NTTS+G+ ++ P+ ++ L +V D +Y
Sbjct: 174 IIDKIITPISLQDIEGFLNNVD--IIVNTTSVGLND--EDFPLFDYSLLKDSHIVVDIIY 229
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
K T+LL+ A+E G +G M I Q + +E +TG
Sbjct: 230 --KETKLLKVAKEKGCKHQNGFPMLIYQGAKSFEIWTG 265
>gi|294616615|ref|ZP_06696391.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430849862|ref|ZP_19467629.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
gi|291590565|gb|EFF22298.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430536557|gb|ELA76924.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
Length = 284
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ ++ N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLIVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|411120996|ref|ZP_11393368.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
gi|410709665|gb|EKQ67180.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
Length = 286
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 145/277 (52%), Gaps = 31/277 (11%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G++G P+ HS SPI++N A +G + V++ V +D+++ +++ GF+
Sbjct: 6 TKLLGVVGHPIEHSLSPIMHNAAIAQLGVDYVYLPFPVKPEDLSQALAGFAAIGVQGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK++ ++ ++ +A+++GAVN + R S+ G NTD G ++ + LR +
Sbjct: 66 TIPHKQSIMRLLSDISPLAQAVGAVNTVWR--SETGWHGTNTDVAGFLAPLRS-LRADWS 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRAR-ELAETVGGHA 428
+ +++G GGA +A+ G G RV + R DRA+ E + H+
Sbjct: 123 QTE----------VLILGIGGAARAVVAGCAELGCTRVRVVGR--DRAKLEQFQHSWAHS 170
Query: 429 LSLADLE--------NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAV 477
+ +L+ + P G+I+ NTT IGM P VD++PI + H + +D +
Sbjct: 171 PIMVNLQTHLWEALPSLLPMAGLIV-NTTPIGMFPNVDQSPISLEYILHLQPGTIAYDLI 229
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 514
YTP TR L+ A E GA + GLEM + Q E +
Sbjct: 230 YTPSPTRFLQYAAEHGAITLDGLEMLVQQGAAALELW 266
>gi|373459968|ref|ZP_09551735.1| Shikimate dehydrogenase [Caldithrix abyssi DSM 13497]
gi|371721632|gb|EHO43403.1| Shikimate dehydrogenase [Caldithrix abyssi DSM 13497]
Length = 279
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 27/272 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F IIG P+ HS SP+++N AF + + + + + ++ + + ++DF GF+ TIP
Sbjct: 4 FAIIGYPLKHSFSPLIHNRAFADLNMDAHYEKIEIAPEEFEREVERLKNSDFVGFNVTIP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE + D++ A IGA+N + ++ + G+NTD++G + +E
Sbjct: 64 YKERIIPFVDQLSAEAVKIGALNTV--KKIGKEWHGFNTDWIGFLKPLEK---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAK--AKGARVVIANRTYDRARELAETV---GGHA 428
SS++ K +++GAGGA + + + + R+V++NRT RA ELA G
Sbjct: 112 -FSSSI--KRCLLLGAGGAARGVFFALLHLPELQRIVLSNRTLKRAEELANQFRPFGQKT 168
Query: 429 LSLADLE---NFNPEDGMILANTTSIGMQPKVDETPIPKHALGH-YALVFDAVYTPKITR 484
+ ++D E N N +I+ NTTS+GM + + H +V+D +Y P T
Sbjct: 169 ICVSDFESLLNMNERFDLIV-NTTSVGMSGHNQTILLEPERVAHSKTVVYDLIYNPLKTI 227
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LL+ AEE G T ++GL M I QA E ++ +TG
Sbjct: 228 LLKRAEERGLTTINGLPMLIYQAEEAFKIWTG 259
>gi|373460325|ref|ZP_09552078.1| shikimate 5-dehydrogenase [Prevotella maculosa OT 289]
gi|371955972|gb|EHO73768.1| shikimate 5-dehydrogenase [Prevotella maculosa OT 289]
Length = 249
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 141/262 (53%), Gaps = 30/262 (11%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + + + + +I + N + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGFFNEKFQNEGIDAQYCNFEIPNIDCLQEVMVQNPNLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGL-RGRLN 370
KE + DE+ AK+IGAVN +I+ GK L GYN+D +G +IE L RG
Sbjct: 64 KEKIISFLDEISPEAKNIGAVN-VIKISHKGKKTILKGYNSDVIGFTKSIEPLLERGH-- 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
K +++G GGA KA+ YG + G + ++ +R Y+R T+ +++
Sbjct: 121 -----------KKALILGTGGASKAIKYGLNSLGVQTLLVSR-YERPG----TIQYSSVT 164
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREA 489
++ + ++ N T GM PK DE P +P A+ ++ L++D +Y P T +++
Sbjct: 165 PQIIQEYK-----VIVNCTPCGMYPKADECPDLPYEAMDNHTLLYDLIYNPDETLFMQKG 219
Query: 490 EESGATIVSGLEMFIGQAYEQY 511
+ GAT+ +GLEM + QA+E +
Sbjct: 220 AKYGATVKNGLEMLLLQAFESW 241
>gi|295660620|ref|XP_002790866.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
gi|327507665|sp|C1H8L1.1|ARO1_PARBA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226281118|gb|EEH36684.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1523
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 235/515 (45%), Gaps = 62/515 (12%)
Query: 49 GADLVEIRLDGLKNFNP----------RENIKTLIKESPVPTLFTYRPIWEGGQYDGDE- 97
G+D VE+R+D LK+ E I L VP +FT R +GG++ D
Sbjct: 994 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQGGRFPDDAY 1053
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+ + + LA+ +G++++D+EL + ++ K K+I S H+ + S + S
Sbjct: 1054 DAALRLYCLAIRMGSEFVDLELSFPEQLLRTVTEMK-GFSKIIASHHDPEGLLSWANGSW 1112
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQ----VPIIGLVMGERGLISRILC 212
+ +A D++K A + D A + + ++ VP+I + MG +G +SRIL
Sbjct: 1113 IQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMGYKGQLSRIL- 1171
Query: 213 AKFGGFLTFGTLENGIV--SAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSP 269
GF+T G+ +APGQ + +++ MG K F +IGKPV S+SP
Sbjct: 1172 ---NGFMT-PVSHPGLPFKAAPGQLSAREIRK--GLSLMGEIKAKKFAVIGKPVSSSRSP 1225
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
++N FK +G + + D+ + S DF G S TIP K + DE+ A
Sbjct: 1226 AMHNALFKQMGLPHTYGRIETDNPEDVKEFIRSPDFGGASVTIPLKLDIMPLLDEIAPEA 1285
Query: 330 KSIGAVNCIIR-------RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGK 382
+ IGAVN I+ + +L G NTD+ G + + D G + + +S+ AG
Sbjct: 1286 EMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA--GAYSAATPTTSS-AG- 1341
Query: 383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV-GGHALSLAD----LEN 436
++IG GG +A + + + + I R+ ++ +A + + + + D LE+
Sbjct: 1342 --LIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNIRIVDDVKALES 1399
Query: 437 FN-------PEDGMI-------LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
P D I L S+ + V+ + + ++ + Y P +
Sbjct: 1400 LPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAE--RRTGITPKRILLEMAYKPSV 1457
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T L++ A ++G T++ GLE+ + Q Q E +T +
Sbjct: 1458 TSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWTDI 1492
>gi|258404226|ref|YP_003196968.1| shikimate 5-dehydrogenase [Desulfohalobium retbaense DSM 5692]
gi|257796453|gb|ACV67390.1| shikimate 5-dehydrogenase [Desulfohalobium retbaense DSM 5692]
Length = 271
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 24/281 (8%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFS 309
D ++FGIIG P+GHS SP+L+N A ++ G G ++ + +A F G S
Sbjct: 3 DPRLFGIIGHPLGHSLSPVLHNWALEAQGIPGSYLRWDIPPARLADFVTAARLLPIHGAS 62
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK + D + A+ GAVN + Q +L G NTD G ++ +
Sbjct: 63 VTIPHKVEVIDYLDRITDRARQAGAVNTLYWEQD--RLCGTNTDSEGFLAPL-------- 112
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
++S+ + +++G GGA +A G V I R +++ LA GGH L
Sbjct: 113 -----LASSRFPRSALILGNGGAARACLAALLEHGTEVWICGRRREQSEVLAAAFGGHVL 167
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDE-TPIPKH-ALGHYALVFDAVYTPKITRLLR 487
D E+ + +L N+T +GM + + +P+P++ +L ++A V++ +Y P T L+R
Sbjct: 168 ---DWESRSTASAELLVNSTPLGMAGQRESLSPMPQNGSLQNFATVYELIYNPMDTVLIR 224
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYK 528
+A E G ++GL MF+ QA Q+ +TG +M+ P ++
Sbjct: 225 QAREEGLQTITGLAMFVHQAAAQFRLWTGR--EMDIPAAWE 263
>gi|448397353|ref|ZP_21569474.1| shikimate 5-dehydrogenase [Haloterrigena limicola JCM 13563]
gi|445672990|gb|ELZ25558.1| shikimate 5-dehydrogenase [Haloterrigena limicola JCM 13563]
Length = 267
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 145/275 (52%), Gaps = 23/275 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G +V D DI + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDEDDIEDAIAGADALGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A++ D A+ IGAVN I S G GYNTD VGA+ A+ D
Sbjct: 62 IPFKQDALEIVAPEDLAAR-IGAVNTIDFSGS-GPPTGYNTDAVGALRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
+ VV+GAGGAG+A+A+G GA V IANRT +A LAE V GH
Sbjct: 113 ----DVTIQDARAVVVGAGGAGRAVAFGLADAGATVAIANRTESKAHALAEEVPRATGHG 168
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
L DL+ + ++ N TS+GM+ D TP+P AL V DAVY+P TRLLR+
Sbjct: 169 LG--DLKRLV-TNADVVVNATSVGMES--DATPVPADALHEDLAVLDAVYSPLETRLLRD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
A ++GAT V G M + Q E +E +TG ++A
Sbjct: 224 AADAGATTVDGAWMLLYQGVEAFEIWTGRDAPVDA 258
>gi|254461040|ref|ZP_05074456.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium HTCC2083]
gi|206677629|gb|EDZ42116.1| shikimate 5-dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
Length = 277
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 131/262 (50%), Gaps = 15/262 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP L+ K G G ++ + + D+ + F G + TIPH
Sbjct: 10 GVIGHPIAHSKSPQLHGHWLKKNGIKGHYIPMDIAPKDLESAIRLLPKMGFVGVNVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA +K D V AK IGA N +I R+ DGK+ NTD G + L S
Sbjct: 70 KEAVLKIADLVTDRAKQIGAANTLIFRK-DGKIHADNTDGYGFMQ--------NLLQSAP 120
Query: 375 VSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
AG V +GAGGA +A LA ++++NRT +RA L G +
Sbjct: 121 KWDPRAGPAMV-LGAGGAARAVLASFIDIGVPEILLSNRTRERAETLKADFGDKITVVDW 179
Query: 434 LENFNPEDGM-ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N +G + NTTS+GM K E +P AL LV D VYTP T+LLR A E
Sbjct: 180 VQAGNAIEGANAVINTTSLGMIGK-PEMRVPLDALAPGMLVSDLVYTPLQTKLLRAATEV 238
Query: 493 GATIVSGLEMFIGQAYEQYERF 514
GAT V GL M + QA +ER+
Sbjct: 239 GATAVDGLGMLLHQATPGFERW 260
>gi|255101876|ref|ZP_05330853.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-63q42]
gi|255307745|ref|ZP_05351916.1| shikimate 5-dehydrogenase [Clostridium difficile ATCC 43255]
gi|423092746|ref|ZP_17080550.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
gi|357553616|gb|EHJ35363.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
Length = 287
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 143/281 (50%), Gaps = 29/281 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
T +F +IG PVGHSKSP++YN +FK + + ++ + VD + + + + G +
Sbjct: 7 TGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K A + DE+ A+ IGA N I+ +GKL G+ TD VG + +++
Sbjct: 67 TMPCKSAVTEYMDELSPAARIIGACNTIV--NDNGKLVGHITDGVGYVRNLKEN------ 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 426
GV + GK ++GAGGA A+ GAR + I N Y RA + E +
Sbjct: 119 ---GVE--VKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQTVENIKK 173
Query: 427 HA----LSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
++L DLE+ N + IL N T IGM+P +ET I ++ LV D
Sbjct: 174 DVPECVVNLYDLEDTNKLYEEIQSSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDV 233
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY PK T+++ +AE +G + GL M + Q E + +TGL
Sbjct: 234 VYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGL 274
>gi|398830722|ref|ZP_10588903.1| shikimate 5-dehydrogenase [Phyllobacterium sp. YR531]
gi|398213302|gb|EJM99895.1| shikimate 5-dehydrogenase [Phyllobacterium sp. YR531]
Length = 278
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+ HS+SP+++ K G G + V + +D F T N + G + TIPHK
Sbjct: 6 VTGYPIKHSRSPLIHGHWLKKYGLEGSYGAVEVAPEDFNDFVSTLQQNGYVGGNVTIPHK 65
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E A C + D A+ IGAVN + +G+L G NTD G ++ N+
Sbjct: 66 EMAFALCQKRDPAAEEIGAVNTLWFE--NGQLRGGNTDAYGFLA----------NLDASS 113
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLA 432
K +V+GAGGA +A+ Y K +G + I NRT RA+ELA+ G A A
Sbjct: 114 PKWDTHKTALVLGAGGASRAIIYALKQRGLTDIRIVNRTPARAKELADRFGSGISAHEWA 173
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
L +D ++ NTTS+GM+ K + I + +LV D VY P T LL+ A E+
Sbjct: 174 ALPEL-LDDASLIVNTTSLGMEGK-ESLAIDLSNVKSDSLVTDIVYVPLETPLLKAAREA 231
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G V GL M + QA +E + G+
Sbjct: 232 GLKTVDGLGMLLHQAVPGFEYWFGM 256
>gi|445115183|ref|ZP_21378157.1| shikimate 5-dehydrogenase [Prevotella nigrescens F0103]
gi|444840483|gb|ELX67514.1| shikimate 5-dehydrogenase [Prevotella nigrescens F0103]
Length = 250
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 28/262 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F++ G + + + + I + +N + G + TIP+
Sbjct: 4 YGLIGYPLEHSFSKGYFNEKFQNEGIDAEYNNYEISSIENLLEIIDTNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNV 371
K+ +K D + AK+IGAVN +IR + G L GYN+D +G +IE L
Sbjct: 64 KKQVIKYLDTLSPEAKAIGAVN-VIRIEHIGNKTYLKGYNSDVIGFTKSIEPLLERY--- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +V+G GGA KA+ YG K+ G +R R+ + + + LS
Sbjct: 120 ---------HKKALVLGTGGASKAVCYGLKSLGIETKCVSR-----RKNIDVLTYNDLSP 165
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAE 490
++ FN ++ N T +GM P V+E P+P A+ + L++D +Y P +TR + + +
Sbjct: 166 KIIKEFN-----VIVNCTPVGMYPNVEECLPLPYEAMDSHTLLYDLLYNPNVTRFMEKGK 220
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
E GA + +GLEM + QA+ ++
Sbjct: 221 EHGAVVKNGLEMLLLQAFASWD 242
>gi|315282396|ref|ZP_07870816.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
gi|313613948|gb|EFR87672.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
Length = 273
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 142/266 (53%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G N + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDA--FETEIKKLMDSGVRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A + GAVN ++R++ GK +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELEDLAAASGAVNTVLRKE--GKWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAE-TVGGHALSL 431
+ ++ GAGGA KA+ + A++ +ANRT ++A E+ + HA++L
Sbjct: 112 -IRPITKEDSILITGAGGASKAIYLALTSHTDAKITVANRTTEKAIEMTKGNPNHHAMTL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ EN D I+ TTSIG++ +++PI + + D +Y P T L+EA++
Sbjct: 171 QEAEN-ELADFTIIIQTTSIGLEASKNKSPISLANVSKGTICSDIIYNPAETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA +GL MF+ Q +E +TG+
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGI 255
>gi|289191666|ref|YP_003457607.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
gi|288938116|gb|ADC68871.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
Length = 284
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 139/283 (49%), Gaps = 41/283 (14%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SPI++N AFK G N V+V +L +++ + GF+
Sbjct: 6 TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A+ IGAVN I + DGK GYNTD +GA A+E+ + G++
Sbjct: 66 TIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI-GKVK 122
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+VI G AK V+IANRT ++A LA+ +
Sbjct: 123 DKN-----------IVIFGAGGAARAVAFELAKDNNVIIANRTVEKAEALAKEIS----- 166
Query: 431 LADLENFNPEDG---------------MILANTTSIGMQPKVDETPIPK-HALGHYALVF 474
E N + G I+ N T IGM P VD PI K L +V
Sbjct: 167 ----EKLNKKFGEEVKFSGLDIDLDGIDIIINATPIGMYPNVDVEPIVKAEKLREDMVVM 222
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
D +Y P T LL+EA++ A ++GL M I Q ++ +TG+
Sbjct: 223 DLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGV 265
>gi|78358603|ref|YP_390052.1| shikimate 5-dehydrogenase [Desulfovibrio alaskensis G20]
gi|123551238|sp|Q30VD9.1|AROE_DESDG RecName: Full=Shikimate dehydrogenase
gi|78221008|gb|ABB40357.1| shikimate 5-dehydrogenase [Desulfovibrio alaskensis G20]
Length = 279
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+++GIIG P+GHS SP+L+N F+ +G ++ V + +A+F +G S T
Sbjct: 9 QLYGIIGYPLGHSMSPLLHNWGFELLGEQAAYMAFPVAPEKLAEFICCARMLPVSGLSVT 68
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK+A + D V A++ GAVN + DGKL G NTD G + ++
Sbjct: 69 IPHKQAVMPLLDAVTPRAQAAGAVNTLF--YDDGKLTGDNTDVYGFLHPLD--------- 117
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALS 430
S G + A A +V+GAGGA A+ A+G V + NR DRAR LAE G ++
Sbjct: 118 SCGTAHAAA----LVLGAGGAANAVLAALTARGMCNVTVTNRNGDRARILAERFGVRCVA 173
Query: 431 LADLENFNPEDGMILANTTSIGMQ-PKVDETPI-PKHALGHYA-LVFDAVYTPKITRLLR 487
E + D ++ NTT +GM + +TP+ P A L +D +Y P T L
Sbjct: 174 W---EERHAVDADLVVNTTPLGMAGDRQAQTPLDPAFFSSRPAGLAYDLIYNPAQTFFLA 230
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
A+ +G +++GL+MF+ Q EQ+ + G
Sbjct: 231 SAQAAGWRVLNGLDMFVAQGAEQFRIWRG 259
>gi|452965408|gb|EME70431.1| shikimate 5-dehydrogenase [Magnetospirillum sp. SO-1]
Length = 278
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 133/270 (49%), Gaps = 19/270 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
++ G++G PV HS+SP L+ + + +G ++ L V D+ + F G +
Sbjct: 7 ARLAGVLGWPVSHSRSPRLHGFWLEQLDIDGAYLPLPVAPGDLEAVIRALPRMGFRGANV 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+PHKEA ++ D +D +A+ IGAVN ++ R DG L G NTD G + G
Sbjct: 67 TVPHKEAVMRLVDHLDPLARRIGAVNTLVARD-DGSLEGRNTDAYGFFENLRQGCPAWAP 125
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
SG + VIGAGGA +A+ G + +ANR+ +RA LA +GG
Sbjct: 126 ASGPAA---------VIGAGGASRAVVAALTDAGVPEIRLANRSRERAEILAADLGGPVR 176
Query: 430 SLADLENFNPEDG-MILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
+ E DG +L NTT++GM QP +D + AL ALV D VY P T LL
Sbjct: 177 VVEWSERAGMLDGCALLVNTTTLGMSGQPDLD---LDLSALPQTALVNDIVYVPLETDLL 233
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
A G +V GL M + QA + + G
Sbjct: 234 ARARRRGNPVVDGLGMLLHQAVPGFAAWFG 263
>gi|336255346|ref|YP_004598453.1| Shikimate dehydrogenase [Halopiger xanaduensis SH-6]
gi|335339335|gb|AEH38574.1| Shikimate dehydrogenase [Halopiger xanaduensis SH-6]
Length = 271
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 17/273 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
VFG++G PVGHS SP ++ A+ + + +V D D+ + ++ G + T
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELDIDARYVTFEPDPDDLEDAIEGAAALGVTGLNVT 63
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A+ E D +A IGAVN I + G+NTD GA+ A+ + L++
Sbjct: 64 IPFKQDALAVV-EPDDLAARIGAVNTI--DFTGDHPTGHNTDAGGALRALREQSDATLSL 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALS 430
+ + +A+A+G GA V IANRT +A +LA+ V
Sbjct: 121 EDARAVVVGAGGAG--------RAIAFGLADAGATVDIANRTESKAHDLADEVPDATGYG 172
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
L +LE D +L N TS+GM+ D TP+P +AL V DAVY P TRLLR+A
Sbjct: 173 LENLEELL-SDADVLVNATSVGMEE--DATPVPANALHGELTVMDAVYRPLETRLLRDAA 229
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
+ GAT V G M + Q E +ER+TG ++A
Sbjct: 230 DVGATTVDGAWMLLYQGVEAFERWTGWDAPVDA 262
>gi|397775825|ref|YP_006543371.1| shikimate 5-dehydrogenase [Natrinema sp. J7-2]
gi|397684918|gb|AFO59295.1| shikimate 5-dehydrogenase [Natrinema sp. J7-2]
Length = 269
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 145/268 (54%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G + DDI + + AG + T
Sbjct: 4 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYATFEPEADDIEDAIRGADALGIAGLNVT 63
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+AA++ D +A IGAVN I S G GYNTD +GA+ A+ +
Sbjct: 64 IPFKQAALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAIGALRALREH------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
AL G+ VV+GAGGAG+A+A+G GA V IANRT +A +LA V GH
Sbjct: 115 ----DVALEGEQAVVVGAGGAGRAIAFGLADAGATVAIANRTESKAHDLAAAVPRATGH- 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE D +L N TS+GM D TP+P AL V DAVY+P TRLL++
Sbjct: 170 -GLAALEELL-ADADVLVNATSVGMD--ADATPVPADALHGDLAVLDAVYSPLETRLLQD 225
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A ++GAT V G M + Q E +E +TG
Sbjct: 226 AADAGATTVDGAWMLLYQGVEAFEIWTG 253
>gi|256811286|ref|YP_003128655.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
gi|256794486|gb|ACV25155.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
Length = 282
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 153/275 (55%), Gaps = 25/275 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TKV G+IG PV HS SPI++N AFK G N V+V +L +++ + GF+
Sbjct: 6 TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A+ IGAVN I + +GK GYNTD +GA A+E+ +
Sbjct: 66 TIPHKIEIMKYLDEIDRDAQLIGAVNTI--KIENGKAIGYNTDGIGARKALEEEI----- 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR----ARELAETVG- 425
+ GK V+ GAGGA +A+A+ AK ++IANRT ++ ARE+AE +
Sbjct: 119 ------GEVKGKNIVIYGAGGAARAVAFDL-AKDNNIIIANRTVEKAEKLAREIAEKLNK 171
Query: 426 --GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPKI 482
G + L N + +D ++ N T IGM P VD PI K L +V D +Y P
Sbjct: 172 KFGEEIKFGGL-NVDLDDIDVVINATPIGMYPNVDVEPIVKADKLREDMVVMDLIYNPLE 230
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
T LL+EA+++ A ++GL M I Q ++ +TG+
Sbjct: 231 TVLLKEAKKANAKAINGLGMLIYQGAVAFKIWTGV 265
>gi|433639425|ref|YP_007285185.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
gi|433291229|gb|AGB17052.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
Length = 291
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 137/278 (49%), Gaps = 27/278 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA--KFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+++ G + +V D A + SS AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEARGMDATYVTFEPDRDALGDAIRGASSLGIAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCII----------RRQSDGKLFGYNTDYVGAISAI 361
IP KE A+ E D +A IGAVN I R + + G+NTD GA+ A+
Sbjct: 62 IPFKEGAIDHV-EPDDLAARIGAVNTIAFPEGGSAGADDRDAVTRPTGHNTDAAGAVRAL 120
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421
+ RG + + A A + LA GA V +ANRT +RA LA
Sbjct: 121 RE--RGFADRDDSLDGATAVVVGAGGAGRAIAFGLAEA----GATVRVANRTVERATALA 174
Query: 422 ETV---GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
V GH L DL D +L N TS+GM+ DE+ +P AL +V DAVY
Sbjct: 175 SEVPDASGHGLD--DLPTLL-ADATVLVNATSVGMES--DESIVPSEALHEDLVVMDAVY 229
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P+ TRLLR+A +GAT V G M + Q +ER+TG
Sbjct: 230 RPRETRLLRDAAATGATAVDGTWMLLYQGAAAFERWTG 267
>gi|269925229|ref|YP_003321852.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269788889|gb|ACZ41030.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
Length = 289
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 30/279 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K G+IG P+ HS SP+ AF ++G ++ V +D+ FF + ++ G + T
Sbjct: 2 KQVGVIGYPIKHSISPVFQQAAFDALGIEAIYKAYEVPPEDLRSFFFNLRNGNWLGVNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK AA K DE GA N II +G+L +NTD G I A+E+
Sbjct: 62 IPHKSAAAKLADERSQEVSFTGAANTIISM--NGRLKAHNTDISGFILALEEN------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAE-------- 422
+ K VV+G+GG +A+ Y A + + + R+ D+ L
Sbjct: 113 ----GFQIKSKRAVVLGSGGTTRAVVYALAICEAQSIAVIGRSQDKVHSLISELKPFFEH 168
Query: 423 ---TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE--TPIPKHALGHYALVFDAV 477
TV GH+ + ++ IL NTT IGM+ E +P+ K L +VFD V
Sbjct: 169 KQVTVTGHSWEKDSIRR-QIQNSDILINTTPIGMKGTDQEHLSPVSKEDLSSDLIVFDVV 227
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
Y P +T LL A++ GA+ +SG+EM I Q E + +TG
Sbjct: 228 YNPIMTPLLTYAKDVGASTISGIEMLIYQGAESFRLWTG 266
>gi|315658128|ref|ZP_07911000.1| shikimate dehydrogenase [Staphylococcus lugdunensis M23590]
gi|418637142|ref|ZP_13199472.1| shikimate dehydrogenase [Staphylococcus lugdunensis VCU139]
gi|315496457|gb|EFU84780.1| shikimate dehydrogenase [Staphylococcus lugdunensis M23590]
gi|374839832|gb|EHS03340.1| shikimate dehydrogenase [Staphylococcus lugdunensis VCU139]
Length = 271
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
F +IG P+ HS SP+++N FK++ + +H+ + + + GF+ TIP
Sbjct: 3 FAVIGDPISHSLSPLMHNANFKALNMRHTYEAIHVPREHFHHIKDIIAEKEIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEA + D +D AK+IGAVN I +Q GK GYNTD +G ++ ++
Sbjct: 63 HKEAIIPYLDVIDDTAKNIGAVNTIAIKQ--GKWIGYNTDGIGYVTGLKH---------- 110
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+ + +++GAGGA K +A+ K ++ +ANRT R V +L A
Sbjct: 111 -IYPDIEHAYILILGAGGASKGIAHELIKYVEPKITVANRTAKRFDSWTLDVNKISLETA 169
Query: 433 DLENFNPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ + N D I+ NTT +GM Q K + L LV D VY P T L +AE+
Sbjct: 170 E-RHLNQFD--IIINTTPVGMSQSKASVVSLSN--LSPQTLVSDIVYIPAKTPFLDQAEQ 224
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
+G I +GL+MFI Q + +TG +N
Sbjct: 225 NGNPIYNGLDMFILQGAASFNIWTGQTANIN 255
>gi|149249019|ref|XP_001528849.1| pentafunctional AROM polypeptide [Lodderomyces elongisporus NRRL
YB-4239]
gi|327507644|sp|A5H2P4.1|ARO12_LODEL RecName: Full=Pentafunctional AROM polypeptide 2; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|146453322|gb|EDK47578.1| pentafunctional AROM polypeptide [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1551
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 238/509 (46%), Gaps = 60/509 (11%)
Query: 50 ADLVEIRLDGLKNFNPR---ENIKTLIK-ESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
++ VE+R+D L N E I L + +P L+T R + GQY D DE +L
Sbjct: 1064 SNAVELRVDLLANQETAYIAEQIGLLRSVATDLPILYTVRTKSQCGQYPDEDEEGMRKLL 1123
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVARI 162
+++G D ID++L + + K+ K+I S H++ +++ N A+
Sbjct: 1124 MFGLKMGVDIIDLQLISSPSTIAEVISKRGH-TKIIASHHDFTGDLKWDNVEWKNKYAQG 1182
Query: 163 QASGADIVKFATTALDITD--VARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLT 220
+ AD VK A D + F+ +++ P+IG+ MG +G +SR+L LT
Sbjct: 1183 VSIDADFVKLVGMAKTFDDNLLLENFR-RQNTEKPLIGINMGPQGKLSRVL----NKVLT 1237
Query: 221 FGTLENGIVSAP---GQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
T E I P GQ ++K++ + F+ G K F ++G PV HS+SP L+N A+
Sbjct: 1238 PVTHEL-ITDKPIGVGQLSLKEI-NQALFQIGGLLEKEFWVVGFPVSHSRSPALHNAAYA 1295
Query: 278 SVGFNGVFVHLLVDDIAKFF-QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVN 336
++G F DD K + Q F G + TIP K K C E+ AK IGAVN
Sbjct: 1296 ALGLPYKFDIFETDDAEKVYTQLMQKPTFGGLAVTIPLKLDIKKYCTELSESAKLIGAVN 1355
Query: 337 CIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 394
+ +DG+ G NTD++G ++ + + ++ GV++ L V+G GG +
Sbjct: 1356 TVT-PIADGRKGFLGDNTDWIGIANSFK---KADFALASGVTNGL------VVGGGGTSR 1405
Query: 395 ALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453
A + + G ++ + NRT + ++L ++ + L + +N A++ SIG+
Sbjct: 1406 AAIFALHSLGCQKIYLLNRTESKLQDLVDSFPDYDLEILLEKN---------ASSVSIGL 1456
Query: 454 -------QPKVDETPIPK--HALGH-------YALVFDAVYTPKITRLLREAEES-GATI 496
+DET + K L + L+ +A Y P++T ++ A+E T+
Sbjct: 1457 VVSCVPGDKALDETLMKKLDGVLSNNKGDKQTRPLLLEAAYKPRVTPIMELAKEKYDWTV 1516
Query: 497 VSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
+ G+EM + Q Q++ TG H
Sbjct: 1517 IPGVEMLVNQGEAQFKLHTGYTAPYKVIH 1545
>gi|395225305|ref|ZP_10403832.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
gi|394446552|gb|EJF07373.1| shikimate 5-dehydrogenase [Thiovulum sp. ES]
Length = 261
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 33/260 (12%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
K+F I G PV HSKSP+++N FK + ++ ++D + + +G S T+P
Sbjct: 2 KLFTIFGNPVSHSKSPLIHNSVFKKYALDHRYIRTAIEDGKTIPDVMKNLNISGASVTVP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE A + CDEV VA+ IGAVNC++R GK+ GYNTD G I +I D ++
Sbjct: 62 HKEVAFQICDEVQGVARDIGAVNCLVRNNC-GKIIGYNTDGDGFIHSIRDWKFEKI---- 116
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLA 432
+++GAGG KA+ + +G + V I NR+ +R ++ +S+
Sbjct: 117 -----------LIVGAGGTAKAIVHSFINQGFKNVSIVNRSLNRLKDFENL----CISVN 161
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHAL------GHYALVFDAVYTPKITRLL 486
+N + ++ N TS G+ K D P+PK L G Y V DA+Y T L
Sbjct: 162 TWDNLKIDSFDLIVNVTSAGL--KDDLLPMPKEILEALFEKGKY--VVDAIYHE--TPFL 215
Query: 487 REAEESGATIVSGLEMFIGQ 506
R A+E G G +M + Q
Sbjct: 216 RLAKEKGLETKDGSDMLVYQ 235
>gi|212224285|ref|YP_002307521.1| shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
gi|212009242|gb|ACJ16624.1| aroE shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
Length = 275
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 137/274 (50%), Gaps = 27/274 (9%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGF 308
M +T ++G+IG+PV HS SP ++N F+ G N V++ V D+ + + G
Sbjct: 1 MDAETVLYGLIGRPVSHSLSPAMHNALFRLYGMNAVYLAFEVSDLEGAIKGIRALGIRGL 60
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE--DGLR 366
+ T+PHKE V D + + A+++ +VN ++ R G+L G+NTD VGA A+E L+
Sbjct: 61 NVTMPHKETVVGHLDGLSSEAEALNSVNTVVNR--GGELIGHNTDGVGARKALERFTKLK 118
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE---T 423
GR V+I G +K A VV+ NRT +RA+ L
Sbjct: 119 GR---------------RVLIIGAGGAGKAIAHELSKVASVVVLNRTPERAKTLERFGIE 163
Query: 424 VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
VG S + E N + +L N T +GM + + +P L A+V DAVYTP T
Sbjct: 164 VGRLERSRLEAEIRNAD---VLINATPVGMNE--ERSIVPPELLPEGAVVMDAVYTPPKT 218
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LLREAE G V GL M + Q E + +TG+
Sbjct: 219 LLLREAEARGCLTVDGLWMLVYQGAESFRLWTGV 252
>gi|451993921|gb|EMD86393.1| hypothetical protein COCHEDRAFT_1207375 [Cochliobolus heterostrophus
C5]
Length = 1589
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 228/516 (44%), Gaps = 70/516 (13%)
Query: 49 GADLVEIRLDGLKNFNPR----------ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
G+D VE+R+D L++ + E + L + +P +FT R +GG++ D
Sbjct: 1081 GSDAVELRIDLLEDPEGQPGLPTPDFVIEQLTILRTVTSIPVIFTLRTQAQGGKFPDQAY 1140
Query: 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
+E + + R A+ LG +++D+EL + I + ++I S H+ + + + S
Sbjct: 1141 DEALTLYRTALRLGCEFVDLELTMPEHVLQEISENR-GFSEIIASHHDPKGELNWRNGSW 1199
Query: 158 LVARIQA-SGADIVKFATTALDITDVARVFQITVHSQV----PIIGLVMGERGLISRILC 212
+ +A ++K A + D + + +Q P+I + MGE+G +SRIL
Sbjct: 1200 ISQYNRALQYGTVIKLVGVAKSLEDNFALAEFKSWAQTAHPTPLIAINMGEKGKMSRIL- 1258
Query: 213 AKFGGFLTFGTLENGIV---SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSP 269
GF+T + + ++ +APGQ + D+ + P TK F I G P+ S SP
Sbjct: 1259 ---NGFMT--PVSHPLLPSATAPGQLSAVDIRRGLSLMGEIP-TKQFYIFGSPIAQSPSP 1312
Query: 270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
L+N F+ G ++ D+ F + DF G S TIP K+ + D V
Sbjct: 1313 RLHNTLFRETGLPHIYSRHETTDVNSFRDIIRTPDFGGASVTIPLKQDVIPLLDGVGPEV 1372
Query: 330 KSIGAVNCIIRR----QSDGK----LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAG 381
+ IGAVN I+ ++ GK L G NTDY+G + + + + G SAL
Sbjct: 1373 EVIGAVNTIVPEVSIDETTGKQVTKLIGRNTDYLGMVLILRNA------GAQGNGSAL-- 1424
Query: 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRAREL----AETVGGHALSLAD--- 433
VIG GG +A Y K G + + + R + L +E H L+ D
Sbjct: 1425 ----VIGGGGTSRAAIYALKEMGYSPIYLLGRNPSKMEVLKNAFSEEYNVHVLNSPDDVA 1480
Query: 434 ------------LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
+ P D I S+ + K I +G ++ + Y P
Sbjct: 1481 ALDAAPQAAIGTIPADQPIDIAIRETLCSLFEKGKASVRDI---DVGGERILLEMAYKPS 1537
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+T L++ A ++G V+GLE+ +GQ Q+E +TG+
Sbjct: 1538 VTALIQLAMDNGWKTVNGLEVLVGQGVNQFEYWTGV 1573
>gi|291545243|emb|CBL18352.1| shikimate 5-dehydrogenase [Ruminococcus champanellensis 18P13]
Length = 281
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 30/274 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
++ +G+IG P+GHS SP L+ F G + + L + Q + G++ TI
Sbjct: 2 SEAYGLIGHPLGHSMSPFLHKALFALGGKDASYRLLDLAPETMEQQVQDMTGYLGWNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-GLRGRLNV 371
P+KE + D +D A AVNC+ RR+ DG L GYNTD G + A+ D L GR+
Sbjct: 62 PYKERIIPLLDRLDPSAARYNAVNCV-RREPDGTLTGYNTDCTGFLHAVRDFSLGGRV-- 118
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA---------RELAE 422
+++G GGAG+ +A A GA++ I R ++ R+
Sbjct: 119 -------------LLLGCGGAGRMMATEAATAGAQLTIGVRNPEKPELTALAAHLRKAYP 165
Query: 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
G L ++ D +L N+T +GM P + P+P + VFDA+Y P+
Sbjct: 166 AAGVQLLPFGEISG----DFDLLLNSTPVGMFPHTEGCPVPDAVIRRCGAVFDAIYNPEQ 221
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRL+ A ++G V G++M + QA E + G
Sbjct: 222 TRLMELARQAGIPTVGGMDMLVQQAACAQEIWYG 255
>gi|357051701|ref|ZP_09112869.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
gi|355379429|gb|EHG26591.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
Length = 289
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 30/279 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ + V++ VD +A Q+ D G +
Sbjct: 9 TRLAALFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLLGVNL 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE+ A+ IGA+N I+ + G L G+NTD +G + A+
Sbjct: 69 SMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRAL--------- 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYD-------RARELAE 422
G + ++ G VIGAGGA A+ A G + + NR + + +++A
Sbjct: 118 --GDIEVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESKLQQIAA 175
Query: 423 TVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
+ ++L DL++ ++ +L N T +GM+P+ D +P+ + +L V+D
Sbjct: 176 ATTCN-ITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESLAVYDV 234
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
+Y P+ TRLLR+A+ +GA +GL M + Q +E +T
Sbjct: 235 IYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWT 273
>gi|399575398|ref|ZP_10769156.1| shikimate 5-dehydrogenase [Halogranum salarium B-1]
gi|399239666|gb|EJN60592.1| shikimate 5-dehydrogenase [Halogranum salarium B-1]
Length = 285
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
+VFG++G PVGHS SP ++ A++++G + +V D +A + + G + T
Sbjct: 11 QVFGLVGNPVGHSLSPPMHEVAYEALGMDARYVTFEPDPDSLADAVRGADALGITGLNVT 70
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL-FGYNTDYVGAISAIEDGLRGRLN 370
IP K+ ++ D D +A IGAVN + SDG + GYNTD GA A+E R +
Sbjct: 71 IPFKQEMLELVDP-DPLAARIGAVNTV-DFSSDGDVPTGYNTDAGGARRALE-----RHD 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA------ETV 424
V+ ++A+ A A A GA V IANRT A ELA E+V
Sbjct: 124 VTLDGAAAVVVGAGGAGRAVAFALADA------GATVHIANRTEATATELANAVAETESV 177
Query: 425 GGHALSLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
A++ L++ P D +L N TS+GM+ DETPIP L V DAVY+P
Sbjct: 178 ANDAVTAGGLDSLAPTVPDADVLVNATSVGME--SDETPIPAELLHANLAVMDAVYSPLE 235
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRLLR+A ++GAT V G M + Q E ++ +TG
Sbjct: 236 TRLLRDATQAGATTVDGAWMLLYQGVEAFDHWTG 269
>gi|170078337|ref|YP_001734975.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7002]
gi|169886006|gb|ACA99719.1| shikimate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 287
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 27/279 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT--YSSNDFAGFSC 310
TK+ G+IG PV HS SPI++N A +G + V++ V A + + D GFS
Sbjct: 7 TKLLGVIGDPVKHSFSPIMHNAAIAELGVDYVYLAFPVAAAALKAALDGFWAIDLQGFSI 66
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + + + A+ +GAVN + R ++ + G NTD G ++ ++ R N
Sbjct: 67 TIPHKQAIMAHLEAIAPEAELVGAVNTVWRTETGWQ--GTNTDVAGFVAPLQALERDWSN 124
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL 429
V+ V++G GGA +A+ G G ++ + R ++ + +E+ L
Sbjct: 125 VTP-----------VILGNGGAARAVVVGCHQLGCPQIHVLGRDPEKLAQFSESWQNTPL 173
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYT 479
+ D + P+ +L N T IGM PKVD +P+ + + A+ +D +YT
Sbjct: 174 AGKVQTHLWGDRQRLIPQ-AQLLINATPIGMFPKVDASPVSDELMANLPPGAIAYDLIYT 232
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
P T+ L++A+ GA I+ G EM + Q E++ G P
Sbjct: 233 PSPTQFLKQAQTQGAAIIDGSEMLVQQGAIALEKWLGQP 271
>gi|436840750|ref|YP_007325128.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169656|emb|CCO23027.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 272
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 140/270 (51%), Gaps = 23/270 (8%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGF 308
PD K+FGIIG P+GH+ SP+L+N F V++ + I F T+ + +G
Sbjct: 6 PD-KLFGIIGHPLGHTMSPLLHNWGFAQQNIRAVYMAWPTQPESIENFMHTFRTLPVSGA 64
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
S TIPHK + + D++ AK+IGAVN + R + ++ G NTD G + + LR
Sbjct: 65 SVTIPHKISVMDYIDKLTDRAKAIGAVNTLYWR--NDQVIGDNTDTAG----VSEPLRPH 118
Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTYDRARELAETVGGH 427
V AL +IGAGGA +A G ++ + + I NRT +A +LAE
Sbjct: 119 ---CAQVKKAL------LIGAGGASRAAIVGLQSLQIEEIHITNRTQSKAGDLAEEFN-- 167
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDE-TPIPKHALGHYALVFDAVYTPKITRLL 486
+S D +N + ++ N+TS+GM K+++ P+ +V+D VY P T LL
Sbjct: 168 -VSTVDWDNRGDQHYDLIVNSTSLGMSGKLEKINPMILDNQDANTIVYDLVYNPLETVLL 226
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
REA + G+EMF+ Q Q++ +TG
Sbjct: 227 REAAARKCKTIHGIEMFLHQGLAQFKIWTG 256
>gi|421873988|ref|ZP_16305597.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
gi|372457099|emb|CCF15146.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
Length = 277
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 133/268 (49%), Gaps = 18/268 (6%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTI 312
+ G+ G+PVGHS SP+++N AF+ + V+D I + + + G + TI
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHK A + D++D +A+ IGAVN I+ DG L GYNTD G + R L +
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIV--NEDGTLIGYNTDGTGYV-------RSLLEET 111
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A 428
G + L GA A K R+V NR+ +RA LA +G
Sbjct: 112 GIDLTEQTVTLLGAGGAARAVACTLVERGVKEIRIV--NRSLERAELLALALGSQIPIRV 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
S A E +D +L NTTSIGM P + E P+ + L +V D +Y P T+LL+
Sbjct: 170 YSFAHAE-LAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQLLQC 228
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A+E GAT SGL MFI Q YE +TG
Sbjct: 229 AKEIGATHHSGLGMFINQGALAYELWTG 256
>gi|57640200|ref|YP_182678.1| shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
gi|73914165|sp|Q5JFT1.1|AROE_PYRKO RecName: Full=Shikimate dehydrogenase
gi|57158524|dbj|BAD84454.1| Shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
Length = 272
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 21/268 (7%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T+++G+IG P HS SP+++N AF+++G N V++ V +++ + + +G +
Sbjct: 5 ETRLYGVIGFPARHSLSPVMHNAAFRALGINAVYLAFEVPPEELGEAIGGAKALGISGLN 64
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKEA + D + + IG+VN ++ R+ G+L G+ TD +GA A+E +
Sbjct: 65 VTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNRK--GRLEGHTTDGLGARRALERAIE--- 119
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVGGHA 428
L G+ ++IGAGGAGKA+AY ++ VV+ NRT ++A+ L + G A
Sbjct: 120 ---------LGGRRILIIGAGGAGKAIAY-ELSRDNEVVVLNRTPEKAKALERFGITGDA 169
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
L+ +L + E +L N TS+GM ETP+P L +V D VY P TRLL E
Sbjct: 170 LNRENLGEY-LEWAEVLINATSVGMNSW--ETPVPAELLRRDLVVMDIVYKPLKTRLLTE 226
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
AE G V GL M + Q E + +TG
Sbjct: 227 AELRGCKTVDGLWMLVYQGIESFRLWTG 254
>gi|448528629|ref|XP_003869735.1| Aro1 pentafunctional aromatic enzyme [Candida orthopsilosis Co
90-125]
gi|380354089|emb|CCG23602.1| Aro1 pentafunctional aromatic enzyme [Candida orthopsilosis]
Length = 1548
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 226/508 (44%), Gaps = 59/508 (11%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
GA+ VE+R+D L ++ + + L K +P ++T R +GG + D D + +L
Sbjct: 1062 GANAVELRIDLLAKYDTSFIADQVGLLRKTVDLPIIYTIRTKSQGGMFPDEDLDTIRSLL 1121
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQ- 163
+++G D ID++L + + D + K+ KVI S H++ +++ Q
Sbjct: 1122 LFGIKIGVDVIDLQLISSNDVIDEVMAKR-SHTKVIASHHDFTGQLKWDNVEWKTKYDQG 1180
Query: 164 -ASGADIVKFATTALDITDVARVFQITVHSQV-PIIGLVMGERGLISRILCAKFGGFLTF 221
+ ADIVK A+D D + + + + P+IGL MG +G +SR+L F
Sbjct: 1181 VSINADIVKLVGKAIDFNDNLLLEKFRSENTIKPLIGLNMGPKGKLSRVLNTVFTP---- 1236
Query: 222 GTLENGIVSAP---GQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKS 278
+ I P GQ T+K++ + Y F+ G K F ++G P+ HS+SP L+N +++
Sbjct: 1237 -VTHDLITDKPQGVGQLTVKEINEAY-FQIGGFVEKKFWVVGSPIEHSRSPALHNAGYEA 1294
Query: 279 VGFNGVFVHLLVDDIAKFFQTYS-SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
+ F D + +DF G + T+P K +K ++ AK IGA+N
Sbjct: 1295 LSLPYEFDRFESSDAESVYNKLMLRSDFGGLAITMPLKLDMMKYATKLSDPAKLIGAINT 1354
Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
I+ D G NTD+VG ++ + G VV G G + A+
Sbjct: 1355 IV--PIDDGFLGDNTDWVGITNSFK---------QSGFVGGNNVNGLVVGGGGTSRAAIY 1403
Query: 398 YGAKAKGARVVIANRTYDRARELA---------------ETVGGHALSLA--DLENFNPE 440
K ++ + NRT + ++A E V G +SLA + + P
Sbjct: 1404 AMHKLGCQKIYLLNRTVSKLHDIANSFPKDYNIEIVESDEQVNGKPVSLAVSCVPSSAPL 1463
Query: 441 DGMILANTTSI--GMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES-GATIV 497
D ++L I +P DE L+ +A Y P++T +++ AE+ ++
Sbjct: 1464 DDVLLRRLEIIFNSNKPASDEA----------LLLLEAAYKPRVTPVMKLAEDKYNWKVI 1513
Query: 498 SGLEMFIGQAYEQYERFTGLPGKMNAPH 525
G+EM + Q EQ++ TG + H
Sbjct: 1514 QGVEMLVNQGKEQFKIHTGFAPPYDVIH 1541
>gi|304316729|ref|YP_003851874.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778231|gb|ADL68790.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 283
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 148/279 (53%), Gaps = 24/279 (8%)
Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
+ T ++GIIG P+GHS SP ++N AF+SV N V+V V +++ +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPFIHNAAFESVNLNSVYVSFDVHEENLKDAILGIKALGI 61
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
G + T+PHKE +K D + AK IGAVN I + ++G L GYNTD G ++++
Sbjct: 62 KGINVTVPHKENVMKYLDYISDEAKLIGAVNTI--KNNNGILEGYNTDVTGFTESLKEH- 118
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETV 424
+ GK V++GAGGA +A+A G G + ++IANR+ ++AR L+ +
Sbjct: 119 ----------DIVVEGKNAVILGAGGAARAVAVGLSLTGVKSIMIANRSKEKARNLSNYI 168
Query: 425 GGHA------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
+ ++ DL D IL N TS+GM P ++ +P+ + V+D +Y
Sbjct: 169 KNNLGINCIDVTYDDLNQLEEID--ILVNVTSVGMFPDINLSPVDESIAVKAKFVYDIIY 226
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P+ T+LL AE+ ++G +M I QA ++ +TG+
Sbjct: 227 NPEKTQLLSYAEKHSIRNLNGFDMLINQANHSFKIWTGM 265
>gi|448639954|ref|ZP_21677102.1| shikimate 5-dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
gi|445762481|gb|EMA13702.1| shikimate 5-dehydrogenase [Haloarcula sinaiiensis ATCC 33800]
Length = 265
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 140/269 (52%), Gaps = 27/269 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSCT 311
V+G+IG PVGHS SP ++ ++++G + +V D A + G + T
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPAADSGADAIDAAKTLGIDGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ + D +A+ IGAVN + G GYNTD VGA+ A+E +++
Sbjct: 62 IPFKQDVLDAVDPA-PLAERIGAVNTV--DFDGGTPTGYNTDAVGAVRALE---HHSVSL 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
SG AG +A+A+G +G V +ANRT +A LA+ V GH
Sbjct: 116 SGTAVVVGAGGAG---------RAVAFGLADEGLSVKVANRTESKADALADEVPDASGHG 166
Query: 429 L-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L SL+DL D IL N TS+GM+ DETP+P AL V DAVYTP TRLL+
Sbjct: 167 LDSLSDLL----ADADILVNCTSVGMEE--DETPVPADALHGDLAVLDAVYTPIETRLLQ 220
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A +GAT V G M + Q E +ER+TG
Sbjct: 221 DAAAAGATTVDGAWMLLYQGVEAFERWTG 249
>gi|335433606|ref|ZP_08558426.1| shikimate 5-dehydrogenase [Halorhabdus tiamatea SARL4B]
gi|334898612|gb|EGM36716.1| shikimate 5-dehydrogenase [Halorhabdus tiamatea SARL4B]
Length = 265
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSCT 311
V+G++G PV HS SP ++ A+ +G + +V VD + + +G + T
Sbjct: 2 DVYGLLGNPVEHSLSPPMHEAAYDELGIDARYVTFEPPVDAAREAVAAAETLGVSGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ + E D +A IGAVN I S + G+NTD +GA+ A+E R +V
Sbjct: 62 IPFKQDVLGAV-EADDLASRIGAVNTI--DFSGERPTGHNTDALGAVRALE-----RHDV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
AL+G+ VV G +A+ +G +G V IANRT + A ELA V G +
Sbjct: 114 ------ALSGQAVVVGAGGAG-RAITFGLADEGMDVAIANRTVETAHELATEVPGASGHG 166
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
D + D +L N TS+GM D +P+P AL V DAVY+P TRLLREA
Sbjct: 167 LDALDSLLADADVLVNATSVGMDE--DRSPVPATALHAGLAVLDAVYSPIQTRLLREAAA 224
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
+G+T V G M + Q E +ER+TG
Sbjct: 225 AGSTTVDGAWMLLFQGVEAFERWTG 249
>gi|256830488|ref|YP_003159216.1| shikimate 5-dehydrogenase [Desulfomicrobium baculatum DSM 4028]
gi|256579664|gb|ACU90800.1| shikimate 5-dehydrogenase [Desulfomicrobium baculatum DSM 4028]
Length = 270
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL---VDDIAKFFQTYSSNDFAGFSCT 311
+ GIIG P+ H+ SPIL+N F+ +G + H+ + + F + G S T
Sbjct: 3 LLGIIGHPLSHTLSPILHNWGFREMGIKASY-HVWDTPPEKLLSFMAALRTLPIHGTSVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHKE + D++ A+ IGAVN + D L+G NTD G ++ + + R
Sbjct: 62 IPHKETVMPLVDKLTQSARDIGAVNTLY--WHDKVLWGDNTDVTGFMAPLLE----RGTQ 115
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
G V +V+GAGGA +A G + G +V+++ RT RA LA++ +
Sbjct: 116 PGTV---------LVLGAGGAARAAVCGLHSAGWKVLLSARTGGRADRLAQSFQAEHVPW 166
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
AD P +L NTT +GM K +L +LV+D VY PK T+LL +A
Sbjct: 167 ADRHEVRPH---LLVNTTPLGMSGPFQALSPWKSSLAGISLVYDLVYNPKETQLLAQARR 223
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
G I+ GL MF+ Q Q+ER+TG
Sbjct: 224 EGVEIIPGLPMFVHQGLAQFERWTG 248
>gi|340349111|ref|ZP_08672135.1| shikimate dehydrogenase [Prevotella nigrescens ATCC 33563]
gi|339612677|gb|EGQ17480.1| shikimate dehydrogenase [Prevotella nigrescens ATCC 33563]
Length = 250
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 28/262 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE F++ G + + + + I + +N + G + TIP+
Sbjct: 4 YGLIGYPLEHSFSKGYFNEKFQNEGIDAEYNNYEISSIESLLEIIDTNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNV 371
K+ +K D + AK+IGAVN +IR + G L GYN+D +G +IE L
Sbjct: 64 KKQVIKYLDALSPEAKAIGAVN-VIRIEHIGNKTYLKGYNSDVIGFTKSIEPLLERY--- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +V+G GGA KA+ YG K+ G +R R+ + + + LS
Sbjct: 120 ---------HKKALVLGTGGASKAVCYGLKSLGIETKCVSR-----RKNIDVLTYNDLSP 165
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAE 490
++ FN ++ N T +GM P V+E P+P A+ + L++D +Y P +TR + + +
Sbjct: 166 KIIKEFN-----VIVNCTPVGMYPNVEECLPLPYEAMDSHTLLYDLLYNPNVTRFMEKGK 220
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
E GA + +GLEM + QA+ ++
Sbjct: 221 EHGAVVKNGLEMLLLQAFASWD 242
>gi|78777476|ref|YP_393791.1| shikimate 5-dehydrogenase [Sulfurimonas denitrificans DSM 1251]
gi|78498016|gb|ABB44556.1| shikimate dehydrogenase [Sulfurimonas denitrificans DSM 1251]
Length = 263
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 27/265 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
K+F I G PV HS+SP+++N FK++ + + + + D +K +T+ S +G + T+P
Sbjct: 2 KLFAIFGDPVAHSRSPLMHNSVFKNLNYKACYTRIHLQDGSKLKETFLSLKLSGANITVP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA CDEV AK +G VN I+ +G+L GYNTD G + AI++ G
Sbjct: 62 HKEAAYAACDEVRGFAKKVGVVNTIVNE--NGRLIGYNTDADGFMFAIKE--------FG 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
V + L ++GAGG KALA G +V + NR+ R E +G +
Sbjct: 112 DVKNIL------ILGAGGTAKALASKFIDSGIKVSVMNRSDSRLSYFKE-LGCECF---N 161
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIP----KHALGHYALVFDAVYTPKITRLLREA 489
+NF + ++ N+TS G++ K E P P + L + + V + +Y KIT L+ A
Sbjct: 162 WDNFEIKKYDLVLNSTSAGLKDK--EFPAPLALIEQILNNTSFVAEVIY-GKITPFLKLA 218
Query: 490 EESGATIVSGLEMFIGQAYEQYERF 514
+E T G +M + Q E F
Sbjct: 219 KEKNITCKDGADMLLAQGILANELF 243
>gi|51246865|ref|YP_066749.1| 3-dehydroquinate dehydratase [Desulfotalea psychrophila LSv54]
gi|81641058|sp|Q6AIT8.1|AROD_DESPS RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|50877902|emb|CAG37742.1| related to 3-dehydroquinate dehydratase [Desulfotalea psychrophila
LSv54]
Length = 226
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 8/200 (4%)
Query: 49 GADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAM 108
GAD++E+RLD + I ++ LFT RP WEGG + G E +R+ +L A+
Sbjct: 27 GADVIEVRLD----YIDVPEIDPFVESLATDLLFTCRPTWEGGLFAGTEEDRLALLAEAV 82
Query: 109 ELGADYIDVELQVAREFNDSIRGKKPEK-CKVIVSSHNYQYTPSVEDLSNLVARIQASGA 167
GA YID+EL+ A E + +R E+ ++I+S H+++ T ++ L+ ++ ++Q +GA
Sbjct: 83 RAGAAYIDLELRSAEESHQYLRTYLAERETELILSYHDFESTATLAKLTGIIDQMQDAGA 142
Query: 168 DIVKFATTALDITDVARVFQITVHSQ---VPIIGLVMGERGLISRILCAKFGGFLTFGTL 224
DI K TTA DV RVFQ+ ++ +P+I MGE G +SR+ GG++T+
Sbjct: 143 DIGKLITTANSAADVVRVFQVLEYAAKKGLPLIAFCMGEAGAVSRVASCDLGGYMTYCCA 202
Query: 225 ENGIVSAPGQPTIKDLLDLY 244
+ V+A GQ TI ++ ++
Sbjct: 203 DGAEVTAAGQITISEMRGIF 222
>gi|261403468|ref|YP_003247692.1| 3-dehydroquinate dehydratase [Methanocaldococcus vulcanius M7]
gi|261370461|gb|ACX73210.1| 3-dehydroquinate dehydratase, type I [Methanocaldococcus vulcanius
M7]
Length = 223
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 10/229 (4%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ SV+K + + + +D+VE R+D + N E+I+ S P + T
Sbjct: 1 MICLPVVENSVEK-ALKVAEEYLKVSDIVEFRVDMMNNVK-EEDIEKF---SKYPCIITV 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSS 143
RP WEGG + G E ER+ +L+ A+E A ++D+EL+ + + + R + K K+I+S
Sbjct: 56 RPKWEGGFWKGSEEERLKLLKKAIECNAKFVDIELKEKKNKDLVNFRNEIGSKTKIIISY 115
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
H+++ TPS ++L +V + G DI KFAT D DV ++ IIG+ MGE
Sbjct: 116 HDFEKTPSKKELEEVVEKALELG-DIAKFATMVNDKKDVLKILHTIYKYSGNIIGIGMGE 174
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
+G ++RIL FG LTF + G SAPGQ + L +++ +++G D
Sbjct: 175 KGKLTRILGIYFGSVLTFASY-GGKSSAPGQIDVFSLKEIW--KELGID 220
>gi|110801505|ref|YP_698019.1| shikimate 5-dehydrogenase [Clostridium perfringens SM101]
gi|123341937|sp|Q0SV31.1|AROE_CLOPS RecName: Full=Shikimate dehydrogenase
gi|110682006|gb|ABG85376.1| shikimate dehydrogenase [Clostridium perfringens SM101]
Length = 271
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 18/268 (6%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
K+FG+IG+ +GHS SP ++N+ FK +G++ V D ++ G + T
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVRGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++++
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVDI 116
Query: 372 SGGVSSALAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
G F V+GAGGA ++ L Y +K ++V+ +R ++ + + + +S
Sbjct: 117 EGNS--------FFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKVFKKFKDFNINFMS 168
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+LE + E +I NTT GM P + + + + + + D VY P T+ L+ A+
Sbjct: 169 YGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVALDIVYNPLETKFLKMAK 226
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
++G V GL M +GQ + E + G+
Sbjct: 227 DNGLKTVDGLFMLVGQGVKAEEIWNGIK 254
>gi|281425825|ref|ZP_06256738.1| shikimate dehydrogenase [Prevotella oris F0302]
gi|281400086|gb|EFB30917.1| shikimate dehydrogenase [Prevotella oris F0302]
Length = 248
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 26/261 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + + + + + + + N D G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIGFFNEKFQNEGIDAQYCNFEIPSLDCLPEIIAQNPDLKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVS 372
KE + DE+ AK+IGAVN I + K F GYN+D +G +IE L
Sbjct: 64 KEKIIDFLDELSPEAKNIGAVNVIRVNHNGNKTFMKGYNSDVIGFTKSIEPLLE------ 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
K +++G GGA KA+ YG ++ G ++ +R E T+ +++
Sbjct: 118 ------RCHKKALILGTGGASKAIKYGLESLGLETLLVSRF-----ERPGTIQYQSVTPQ 166
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ + ++ N T GM PK DE P +P A+ + L++D +Y P T + + E
Sbjct: 167 LFQEYK-----VIVNCTPCGMYPKADECPALPYEAMDSHTLLYDLIYNPDETLFMHKGAE 221
Query: 492 SGATIVSGLEMFIGQAYEQYE 512
GAT+ +GLEM + QA+E ++
Sbjct: 222 YGATVKNGLEMLLLQAFESWK 242
>gi|253578605|ref|ZP_04855877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850923|gb|EES78881.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 29/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
T + ++G PV HS SP+++NE+F+ +G + V++ V++ + + GF+
Sbjct: 8 TGLTALLGSPVAHSISPLMHNESFRLLGLDYVYLCFDVNEETLPAAVAGLKTCGIRGFNL 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K V+ DE+ A+ IGAVN ++ +GKL GYNTD G + ++ D
Sbjct: 68 TMPNKNKIVELLDELSPEAQLIGAVNTVL--NDNGKLIGYNTDGYGFMQSVRDA------ 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV--IANRT---YDRARELAETVG 425
+ GK V+G GGA A+ + GA V A RT ++R ++ AE +
Sbjct: 120 -----GHDITGKNITVMGVGGASMAICAQSALDGAASVHIFARRTSRYWNRTQKFAENLS 174
Query: 426 ---GHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
G + L D ++ +L N TS+GM P +D+T I +L H LV D
Sbjct: 175 AKTGCQVCLFDNDDHTALRDSIAQSYLLINATSVGMVPDIDDTIIKDTSLFHPELVVADV 234
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
VY P+ TRLLREA+ +G +G+ M + Q + ++ +TG
Sbjct: 235 VYEPQETRLLREAKATGCQTFNGMYMLLHQGAKAFQIWTG 274
>gi|313145427|ref|ZP_07807620.1| shikimate 5-dehydrogenase [Bacteroides fragilis 3_1_12]
gi|423279911|ref|ZP_17258824.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 610]
gi|313134194|gb|EFR51554.1| shikimate 5-dehydrogenase [Bacteroides fragilis 3_1_12]
gi|404584247|gb|EKA88912.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 610]
Length = 247
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGFFNEKFKSEGIDAEYVNFEIPEINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I R GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDKDTAQIGAVNVIKIVRGPKGKVKLTGYNSDIIGFSQSIQPLLQPY--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GG+ KA+ +G K G + +RT +
Sbjct: 121 ---------HKKALILGTGGSSKAIYHGLKNLGIDSIFVSRTQKEG-------------M 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P T ++
Sbjct: 159 LTYEELTPEIMAEHTVIVNCTPVGMYPKVDFCPAIPYELLTPNHLLYDLLYNPNTTLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEEHGAVTKNGLEMLLLQAFAAWE 243
>gi|45358499|ref|NP_988056.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
gi|74554623|sp|Q6LYQ2.1|AROE_METMP RecName: Full=Shikimate dehydrogenase
gi|44921257|emb|CAF30492.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
Length = 278
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 23/273 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SPI++N A K + N + V +++ + +F GF+
Sbjct: 6 TKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNI 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K DE+D A++IGAVN + + +GK GYNTD +G A+E+
Sbjct: 66 TIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEEK------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----- 425
+ L K ++IG+GGA +A+++ AK + I NR ++A L++ +
Sbjct: 118 -----TGILINKNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEISRKLKK 171
Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITR 484
+ L+ L+ N E+ I+ NTT +GM P + P IP + + A+V D +Y P
Sbjct: 172 ENPLNYGGLD-INIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPV 230
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
L+EA++ GA ++G+ M + Q +E +TG+
Sbjct: 231 FLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGI 263
>gi|424662022|ref|ZP_18099059.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 616]
gi|404578333|gb|EKA83068.1| shikimate 5-dehydrogenase [Bacteroides fragilis HMW 616]
Length = 247
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS G + +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGFFNEKFKSEGIDAEYVNFEIPEINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I R GK L GYN+D +G +I+ L+
Sbjct: 64 KEQVIPFLDELDKDTAKIGAVNVIKIVRGPKGKVKLTGYNSDIIGFSQSIQPLLQPY--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GG+ KA+ +G K G V +RT +
Sbjct: 121 ---------HKKALILGTGGSSKAIYHGLKNLGIDNVFVSRTQKEG-------------M 158
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
E PE + ++ N T +GM PKVD P IP L L++D +Y P T ++
Sbjct: 159 LTYEELTPEIMAEHTVIVNCTPVGMYPKVDFCPAIPYELLTPNHLLYDLLYNPNTTLFMK 218
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ EE GA +GLEM + QA+ +E
Sbjct: 219 KGEEHGAVTKNGLEMLLLQAFAAWE 243
>gi|282879523|ref|ZP_06288254.1| putative shikimate 5-dehydrogenase [Prevotella timonensis CRIS
5C-B1]
gi|281306471|gb|EFA98500.1| putative shikimate 5-dehydrogenase [Prevotella timonensis CRIS
5C-B1]
Length = 247
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 131/262 (50%), Gaps = 28/262 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+GHS S +NE F++ G + +V+ + I + +SN + G + TIP+
Sbjct: 4 YGLIGYPLGHSFSIDYFNEKFENEGIDAQYVNFEIPKIENLEEVLASNPELKGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK---LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+ AK IGAVN +IR GK L GYN+D +G +IE L
Sbjct: 64 KEKVISYLDEISPEAKEIGAVN-VIRVTHKGKKTLLKGYNSDVIGFTRSIEPMLETFHQK 122
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
+ +++G GGA KA+ G ++ G +RT + L+
Sbjct: 123 A------------LILGTGGAAKAIDVGLRSLGITTKFVSRTPRQG----------VLTY 160
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAE 490
D+ D I+ N T +GM P D P +P A+ + L++D +Y P T L++
Sbjct: 161 QDITPAVMNDYRIVVNCTPVGMYPHADTCPPLPYEAMDMHHLLYDLIYNPDETLFLKKGA 220
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
E GATI +GLEM + QA+ +E
Sbjct: 221 EHGATIKNGLEMLLLQAFVSWE 242
>gi|432330989|ref|YP_007249132.1| shikimate 5-dehydrogenase [Methanoregula formicicum SMSP]
gi|432137698|gb|AGB02625.1| shikimate 5-dehydrogenase [Methanoregula formicicum SMSP]
Length = 463
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 140/284 (49%), Gaps = 22/284 (7%)
Query: 235 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 294
P ++ L +L N P T++ G+ G P HS+ P L+N F G N + +++
Sbjct: 189 PALRRLEELLNNPPSDPQTRILGVAGYPCAHSRGPTLFNGLFAEYGLNNFYTLFEDPELS 248
Query: 295 KFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT-VAKSIGAVNCIIRRQSDGKLFGYNTD 353
+ Q + D G S TIP K+ + DEVD A+ IGAVN ++ + G GYNTD
Sbjct: 249 QIMQVARAIDAKGLSVTIPFKQDVIGYLDEVDEHAAQQIGAVNTVV--FACGSAIGYNTD 306
Query: 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT 413
++G I L G + G V++GAGG A AY V I NRT
Sbjct: 307 WLG----IRKPLVG-----------MKGAKVVLLGAGGVASAAAYALTDLNMDVTILNRT 351
Query: 414 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV 473
+RA+ELA+ G + + P+ ++ NTT +GM+P +P+ + L V
Sbjct: 352 PERAKELAKRFGCRWAAWDTFDTIRPD---LVVNTTPLGMEPDT-RSPLNESQLYPDLTV 407
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+D VYTP IT L+ A G T ++G +F+ QA EQ+ + G+
Sbjct: 408 YDLVYTPPITPLIEMARAKGCTTITGTGLFLEQAKEQFYLWFGI 451
>gi|340751883|ref|ZP_08688693.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
gi|229420848|gb|EEO35895.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
Length = 273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 19/264 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+G++GK +GHS SP ++N F +G + ++D + GF+ TIP+K
Sbjct: 4 YGLVGKKLGHSLSPEIHNYIFDKLGVEAEYSLYEIEDGKDILKLMEEKGIKGFNITIPYK 63
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
E + D + A+ IGAVN + + +G+ +GYN+DY G + +E
Sbjct: 64 EIVMSQLDFISEEAEKIGAVNLV--KIKNGESYGYNSDYYGVVEMLEKH----------- 110
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGAR--VVIANRTYDRARELAETVGGHALSLAD 433
+ GK+ V+G+GGA K++ GA+ VV+ + REL + +
Sbjct: 111 DVKVKGKICYVLGSGGASKSVIVALHDLGAKEIVVVTRDVESKRRELKNRF--RNIEVVS 168
Query: 434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 493
EN G I+ NTT +GM P +D +P+ + L + + D VY PK T+ L+ A+
Sbjct: 169 YENIIG--GDIVVNTTPLGMYPNIDSSPLDEEILKRFDIAVDIVYNPKTTKFLQLAKNCS 226
Query: 494 ATIVSGLEMFIGQAYEQYERFTGL 517
V G+ M +GQA + E + G+
Sbjct: 227 LKCVDGVSMLVGQAIKSDELWEGI 250
>gi|257869370|ref|ZP_05649023.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
gi|257803534|gb|EEV32356.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
Length = 289
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 30/279 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
T++ + KP HS SP ++N +F+ + V++ VD +A Q+ D G +
Sbjct: 9 TRLATLFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLLGVNL 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++PHK AAV DE+ A+ IGA+N I+ + G L G+NTD +G + A+
Sbjct: 69 SMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRAL--------- 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYD-------RARELAE 422
G + ++ G VIGAGGA A+ A G + + NR + + +++A
Sbjct: 118 --GDIEVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESKLQQIAA 175
Query: 423 TVGGHALSLADLENFNP-----EDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDA 476
+ ++L DL++ ++ +L N T +GM+P+ D +P+ + +L V+D
Sbjct: 176 ATTCN-ITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESLAVYDV 234
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
+Y P+ TRLLR+A+ +GA +GL M + Q +E +T
Sbjct: 235 IYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWT 273
>gi|150399456|ref|YP_001323223.1| 3-dehydroquinate dehydratase, type I [Methanococcus vannielii SB]
gi|166219208|sp|A6UQ39.1|AROD_METVS RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|150012159|gb|ABR54611.1| 3-dehydroquinate dehydratase, type I [Methanococcus vannielii SB]
Length = 218
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 128/223 (57%), Gaps = 8/223 (3%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+PI+ +V+K ++ +A G D+VE RLD L N + + K + +P++ T
Sbjct: 1 MICIPIIDNTVEKALISAKEALKYG-DIVEFRLDLLDNLTKFD----IEKFAKIPSIITI 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSS 143
R WEGG + N+R++ L+ A++ GA +IDVEL+ + + R + K K+IVS
Sbjct: 56 RANWEGGAWKESNNKRIEFLKHAIKHGAKFIDVELKEEKNLELVTYRNEIGSKTKIIVSY 115
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
H+++ TP + +L ++V + + DI KFAT + DV ++ ++ II + MGE
Sbjct: 116 HDFEKTPEINELIDVVEK-ELKIGDIAKFATFSNSKKDVLKILEVMNKYPGDIIAIGMGE 174
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
G ++RIL +FG LTF +++ G SAPGQ + L ++ N
Sbjct: 175 SGKLTRILGLRFGSILTFASMK-GKSSAPGQIDVTKLKEILNL 216
>gi|291542078|emb|CBL15188.1| Shikimate 5-dehydrogenase [Ruminococcus bromii L2-63]
Length = 281
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 32/277 (11%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA------KFFQTYSSNDF 305
+TK F +IG P+GH+ SP ++ F+ G + L DIA +F T S D
Sbjct: 2 ETKKFAVIGHPIGHTMSPFIHTRLFELQGVKAEYTKL---DIAPENLEYEFKNTLSKLD- 57
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
GF+ TIPHK+A + DE+D A+ G+VN + + K GY TD DG
Sbjct: 58 -GFNITIPHKQAVIPFLDEIDAKAEMYGSVNTVSNKNGISK--GYTTD--------PDGF 106
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR------ARE 419
L+ +G + L G++ V+IG GG + +AY K ++ A R D E
Sbjct: 107 LKALDAAGIM---LNGRI-VIIGCGGVARTMAYEVVLKKQPLLFAVRKEDLKIAEALCDE 162
Query: 420 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
+ +TV G +S ++ + D +L N T IGM PK++ P+ + VFDAVY
Sbjct: 163 IRKTVAGCDVSFCLIDELSG-DIDVLINATPIGMFPKIENQPVSDSVINRCTNVFDAVYN 221
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
P T L+++A +GAT SG+ M + QA +E + G
Sbjct: 222 PLETMLVKKARANGATAESGMAMLVWQAVVSHEHWDG 258
>gi|395329229|gb|EJF61617.1| Pentafunctional AroM protein [Dichomitus squalens LYAD-421 SS1]
Length = 1601
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 217/511 (42%), Gaps = 61/511 (11%)
Query: 48 SGADLVEIRLDGLKN------FNP--------RENIKTLIKESPVPTLFTYRPIWEGGQY 93
+G D VE+R+D L++ P E I L + +P +FT R +GGQ+
Sbjct: 1095 AGVDAVEVRVDLLRSSEDYDKLGPYIPPTAYVTEQIAALRHMTTLPLIFTVRTASQGGQF 1154
Query: 94 -DGDENERVDVLRLAMELGADYIDVELQVA-REFNDSIRGKKPEKCKVIVSSH----NYQ 147
D E E ++ A+ LG +YIDVE+ + + + I GK ++I S H N +
Sbjct: 1155 PDHAEKEAFELFVTAIRLGVEYIDVEISWSEKNIRNLIAGKG--HSQIIASWHDWSGNMR 1212
Query: 148 YTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV-----PIIGLVMG 202
+ D VAR DIVK A + D + + + PII + MG
Sbjct: 1213 WDSKALDEKYGVAR---EYGDIVKIVGKANRLEDNFALHNFVLRQRATSDAKPIIAINMG 1269
Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKP 262
G +SRIL + F +T L +APGQ T + + P K F + G P
Sbjct: 1270 VEGQMSRILNSTFSP-VTHNLLPTK--AAPGQLTFAQIQTALHLLGQLPAKK-FYLFGTP 1325
Query: 263 VGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA-KFFQTYSSNDFAGFSCTIPHKEAAVKC 321
+ HS SP L+N AF+ +G + + + + ++ +F G S TIP K +
Sbjct: 1326 IAHSMSPTLHNTAFEVLGLPHKYELFETETVGDEIRAAIAAPNFGGASVTIPFKRDIIPL 1385
Query: 322 CDEVDTVAKSIGAVNCIIR-RQSDG--KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
D + A++IGAVN +I +DG +L G NTD+ G +I L S
Sbjct: 1386 LDRLSPDAEAIGAVNTVIPVLTADGAVQLVGENTDWRGITHSIRRSLP---------PSV 1436
Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALSLADLENF 437
L + ++IGAGG +A Y G + + NRT A L +
Sbjct: 1437 LKPEAALIIGAGGTSRAAIYALWKLGIETIYLFNRTASSAHALVNAFPDVNIKFIAALGA 1496
Query: 438 NPEDG--------MILANTTSIGMQPKVDETPIPKHALGHYA--LVFDAVYTPKITRLLR 487
P++G + A+ TS+ D + K +V D Y P T LL
Sbjct: 1497 WPDNGPAPTVIVSTVPASATSLDSS-NSDAILLTKSLFSAPTGGVVIDMAYKPAETPLLV 1555
Query: 488 EAEESGATI--VSGLEMFIGQAYEQYERFTG 516
A +GA V G+E+ + Q Y Q+ +TG
Sbjct: 1556 LARNTGAQWRRVKGVEVLLEQGYHQFHLWTG 1586
>gi|15669645|ref|NP_248458.1| 3-dehydroquinate dehydratase [Methanocaldococcus jannaschii DSM
2661]
gi|11386641|sp|Q58849.1|AROD_METJA RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|1592097|gb|AAB99464.1| 3-dehydroquinate dehydratase (aroD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 220
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 128/230 (55%), Gaps = 16/230 (6%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ +SV+K + + AD+VE R+D LK + E+I+ K P + T
Sbjct: 1 MICLPVVEDSVEK-AIKTAEKYLEIADIVEFRIDMLKEVS-EEDIEKFAK---YPCIITV 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR-----EFNDSIRGKKPEKCKV 139
R WEGG + G+ ER+++++ A+E A ++D+EL+ + +F D I K K+
Sbjct: 56 RADWEGGYWKGNNEERLNLIKKAIECNAKFVDIELREEKNKELVKFRDEIGSK----TKI 111
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGL 199
I+S H+++ TPS E L +V + + G DI KFAT A DV + ++ IIG+
Sbjct: 112 IISYHDFEKTPSKEKLVEIVEKALSIG-DIAKFATMANSKEDVLNILEVINKYPGKIIGI 170
Query: 200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQM 249
MGE+G ++RIL FG LTF + G SAPGQ I L +++ +
Sbjct: 171 GMGEKGKLTRILGVYFGSILTFASY-KGKSSAPGQVDIDTLKEIWRLMDL 219
>gi|148655701|ref|YP_001275906.1| shikimate 5-dehydrogenase [Roseiflexus sp. RS-1]
gi|148567811|gb|ABQ89956.1| shikimate dehydrogenase [Roseiflexus sp. RS-1]
Length = 283
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPH 314
G+IG PV HS SP L+N AF+ +G + ++ + + + G + T+PH
Sbjct: 7 GVIGDPVDHSLSPFLHNAAFEHLGIVARYERWRTSSAELPQRIASLRAPHILGANVTLPH 66
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K A + D +D A+ IGAVN I+R DG+L G NTD I+ + + G
Sbjct: 67 KIAVIPLLDRLDPQAEQIGAVNTIVR-LPDGQLEGCNTDAPATIATLRE--------DAG 117
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLAD 433
GK V++GA GA +A A A A + + NRT +RA EL V ++ +
Sbjct: 118 FDPT--GKRIVLLGASGAARAAACALIAAQATALTVINRTLERAEELLADVLANSDADPY 175
Query: 434 LENFNPED---------GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
L P+D ++ N TS+G DETP+P H + ALVFD VY P TR
Sbjct: 176 LRALTPDDPDVPEAIASADLIINATSLGWH--ADETPLPGHLIPATALVFDMVYRP--TR 231
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
LLREA ++GA + G M + QA +ER+TG+ ++
Sbjct: 232 LLREAAQAGAATLDGRGMLVRQAALSFERWTGVSAPLD 269
>gi|402489611|ref|ZP_10836405.1| shikimate 5-dehydrogenase [Rhizobium sp. CCGE 510]
gi|401811403|gb|EJT03771.1| shikimate 5-dehydrogenase [Rhizobium sp. CCGE 510]
Length = 285
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 147/285 (51%), Gaps = 37/285 (12%)
Query: 249 MGPDTKVFG----IIGKPVGHSKSPILYNEAFKSVGFNGVF-VHLLVDD-IAKFFQTYS- 301
MG + FG + G P+ HS+SP+++ K++G G + H + + A F T
Sbjct: 1 MGDSRETFGPKAFVTGFPIKHSRSPLIHGYWLKTLGLPGSYRAHEVAPEAFADFIATMKD 60
Query: 302 -SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
S+ FAG + TIPHKE A + D+ D +++ +GA N + DG L NTD G I+
Sbjct: 61 GSSGFAGGNVTIPHKELAFRLADKPDALSRELGAANTLW--LEDGALHATNTDGRGFIAN 118
Query: 361 IEDGLRG--RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRA 417
+++ G R + + VV GAGGA +A+ + +G R + + NRT +RA
Sbjct: 119 LDERHPGWDRHDTA------------VVFGAGGASRAIIQAVRDRGFREIHVVNRTVERA 166
Query: 418 RELAETVGG--HALSLADLENFNPEDGMILANTTSIGMQ----PKVDETPIPKHALGHYA 471
RELA+ G +A A L G+ + NTTS+GM P++D TP L A
Sbjct: 167 RELADRFGPKVYAHPAAALTEVMKSAGLFI-NTTSLGMDGEPAPQLDFTP-----LAADA 220
Query: 472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+V D VY P T LL +AEE G IV GL M + QA +E++ G
Sbjct: 221 VVTDIVYVPLKTPLLAQAEEQGFPIVDGLGMLLHQAVPGFEKWFG 265
>gi|68466283|ref|XP_722916.1| hypothetical protein CaO19.12175 [Candida albicans SC5314]
gi|46444923|gb|EAL04195.1| hypothetical protein CaO19.12175 [Candida albicans SC5314]
Length = 1551
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 226/492 (45%), Gaps = 44/492 (8%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
GAD VE+R+D K+ + I + K + +P ++T R + +GG++ D + +E +L
Sbjct: 1067 GADAVELRVDLFKDTSAEFVAAQIAVIRKHADLPIIYTVRTMSQGGKFPDENVDELKSLL 1126
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH--NYQYTPSVEDLSNLVARI 162
L + LG Y+D++L E + I KK +VI + N + + + N +
Sbjct: 1127 LLGIRLGVAYVDLQLTAPNELIEEISSKK-GFTRVIGTYQDINGELKWNNVEWKNKYNQG 1185
Query: 163 QASGADIVKFATTALDITDVARVFQITVHSQV-PIIGLVMGERGLISRILCAKFGGFLTF 221
+ ADIV+ A I D + + + P+I +G +G +S++L TF
Sbjct: 1186 VSMNADIVRLVGKANSIQDNLDLENFKKQNTLKPLIAFNLGSQGKLSQVLNG------TF 1239
Query: 222 GTLENGIVSAPGQ-PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVG 280
+ + ++ + TI +L Y F G K F +IG P+ HS+SP L+N +K++
Sbjct: 1240 TPISHKLLPNDEEFLTIGELNQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALN 1298
Query: 281 FNGVFVHLLVDDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII 339
F D+ + + DF G + T+P K +K ++ A++IGAVN +I
Sbjct: 1299 LPYQFGRFEATDVDVVYDNLINKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI 1358
Query: 340 RRQSDGKLFGYNTDYVG-AISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAY 398
+G FG NTD+VG + S I G+ + + +G +V+GAGG +A Y
Sbjct: 1359 --PIEGGYFGDNTDWVGISNSFIRAGVPPKSSSNG-----------LVVGAGGTSRAAIY 1405
Query: 399 GAKAKG-ARVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGMILANTTSIGMQPK 456
G A++ + NRT + EL ++ + L + + E + + + I
Sbjct: 1406 ALHQMGCAKIYLVNRTAAKLEELVKSFPKDYNLEIVETEQQADKASKVSLAVSCIPADKP 1465
Query: 457 VDETPIPK----------HALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIG 505
+D + K + G + +A Y P++T +++ EE ++ G+EM +
Sbjct: 1466 LDGEVLKKIERILSNGSEQSAGFKPTLLEASYKPRVTPIMKLTEEQYKWKVIPGVEMLVN 1525
Query: 506 QAYEQYERFTGL 517
Q Q++ TG
Sbjct: 1526 QGDRQFKLHTGF 1537
>gi|16803530|ref|NP_465015.1| hypothetical protein lmo1490 [Listeria monocytogenes EGD-e]
gi|284801877|ref|YP_003413742.1| hypothetical protein LM5578_1632 [Listeria monocytogenes 08-5578]
gi|284995019|ref|YP_003416787.1| hypothetical protein LM5923_1584 [Listeria monocytogenes 08-5923]
gi|386053743|ref|YP_005971301.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|404283982|ref|YP_006684879.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404413569|ref|YP_006699156.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|405758538|ref|YP_006687814.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|16410919|emb|CAC99568.1| lmo1490 [Listeria monocytogenes EGD-e]
gi|284057439|gb|ADB68380.1| hypothetical protein LM5578_1632 [Listeria monocytogenes 08-5578]
gi|284060486|gb|ADB71425.1| hypothetical protein LM5923_1584 [Listeria monocytogenes 08-5923]
gi|346646394|gb|AEO39019.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|404233484|emb|CBY54887.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404236420|emb|CBY57822.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|404239268|emb|CBY60669.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
Length = 273
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 141/266 (53%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G N + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDA--FETEIKKLMDSGVRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE+D +A + GAVN +++++ K +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELDNLAAASGAVNTVLKKED--KWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELA-ETVGGHALSL 431
+ S ++ GAGGA KA+ + A++ +ANRT ++A E+ + HA++L
Sbjct: 112 -IRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E D I+ TTSIG++ +++PI + + D +Y P T L+EA++
Sbjct: 171 EEAEK-QLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA +GL MF+ Q +E +TG+
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGI 255
>gi|374635880|ref|ZP_09707469.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
gi|373560842|gb|EHP87092.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
Length = 282
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 22/272 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
TK+ G++G PV HS SPI++N AF+ N V++ +L +++ + GF+
Sbjct: 6 TKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLRYVIDGAKAMGIVGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK ++ DE+D AK IGAVN I + + K GYNTD +GA A+E+ + ++
Sbjct: 66 TIPHKIEIMEYLDEIDENAKLIGAVNTI--KIENNKAIGYNTDGLGARMALEEEIGKVVD 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
S ++I G AK ++IANRT ++A+ LAE V
Sbjct: 124 KS------------IIIYGAGGAARAVAFELAKNNNIIIANRTIEKAKSLAEEVREKLNK 171
Query: 431 LADLENFNPEDGM-----ILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITR 484
+ ++ D I+ N T IGM P VD PI K H + V D +Y P T
Sbjct: 172 TEEEVKYSGLDASLDEIDIIINATPIGMYPNVDVEPIVKAEEMHNDMVVMDLIYNPLETV 231
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
LL+EA++ GA ++GL M I Q +E +T
Sbjct: 232 LLKEAKKVGAKTINGLGMLIYQGAIAFEIWTN 263
>gi|452944376|ref|YP_007500541.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. HO]
gi|452882794|gb|AGG15498.1| shikimate 5-dehydrogenase [Hydrogenobaculum sp. HO]
Length = 273
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 30/284 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T +GI G PV HS SP+ + AF N +++ V +D+ + + G +
Sbjct: 9 TLCYGIFGYPVKHSLSPVFQSFAFSKKNINAIYIPFEVKPEDLEIAIKGAKAMSVKGLNI 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHKE+ ++ D + K IG+ N ++ ++ K YNTDY+G A+E+
Sbjct: 69 TIPHKESVLEFVDVISDDVKKIGSCNTLLFEENIIK--AYNTDYIGFKRALEE------- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET----VGG 426
++L GK +V+GAGG KA+ Y + G +V + NRT +A +L E V G
Sbjct: 120 -----KTSLNGKKALVLGAGGTSKAIIYALTSSGVKVYLHNRTIKKALKLKEIFDVEVIG 174
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
H + D+ + I+ NTTS+G++ DE + + +VFD +Y K T L+
Sbjct: 175 H---IEDILQYVD----IIVNTTSVGLKDD-DEALFDYDKISAHHIVFDVIY--KDTALI 224
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF 530
++A+E GA V+GL M + Q E ++ +TG+ AP +++
Sbjct: 225 KKAKEKGAVAVNGLPMLVYQGLESFKIWTGVDAFDIAPQIFELL 268
>gi|404316696|ref|ZP_10964629.1| shikimate 5-dehydrogenase [Ochrobactrum anthropi CTS-325]
Length = 282
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+ HS+SP+++ +G +G + + V +D F + + N FAG + TIPHK
Sbjct: 7 VTGFPIKHSRSPLIHGFWLDELGIDGSYEAIEVKPEDFGFFASSLAENGFAGGNVTIPHK 66
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
EAA + +D AK+IGAVN + +G+L G NTD G + ++ G N
Sbjct: 67 EAAYAAVESLDEAAKAIGAVNTLWLE--NGRLNGGNTDAYGFAANLDASASGWDN----A 120
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLA-D 433
SAL V+GAGGA +A+A+ ++G +V I NRT RA++LA G + D
Sbjct: 121 DSAL------VLGAGGASRAIAHALLSRGFKKVAIVNRTVSRAQDLATHFGPRVSAYGWD 174
Query: 434 LENFNPEDGMILANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEE 491
D ++ NTTS+GM ++ P+ A+ D VY P T L++AEE
Sbjct: 175 AAQKLVSDAGLIVNTTSLGMSGHDEQEVFPLDLGKASRKAVATDIVYVPLKTPFLKKAEE 234
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
+G V GL M + QA +ER+ G
Sbjct: 235 AGLVTVDGLGMLLHQAVPGFERWFG 259
>gi|451822090|ref|YP_007458291.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788069|gb|AGF59037.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 31/300 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T ++ +IG P+GHS SP +YN +F+ +G + +V + ++ + + + +
Sbjct: 3 KRISGTTALYCLIGTPIGHSGSPAMYNYSFQKLGIDSAYVAFDISIEKVKDTIAAFRTLN 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K K DE+ A+ +GAVN I+ GKL G TD VG + +++
Sbjct: 63 IKGANVTMPCKNEVAKYMDELSPAARLVGAVNTIV--NDGGKLTGNITDGVGFVRNLKEH 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRAREL 420
GV + K ++GAGGA A+ GA+ + I + Y +A +
Sbjct: 121 ---------GVD--IKNKKITILGAGGAATAIQVQCALDGAKEINTFNIKDDFYKKAEKT 169
Query: 421 AETVGGHA----LSLADLE-----NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA 471
E + L+L DLE N D IL N T +GM P +E+PI +
Sbjct: 170 IENIRKEVSECVLNLYDLEDVKKLNEKIADSDILVNATHVGMHPNENESPIKDIRVFRRD 229
Query: 472 LVF-DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF 530
LV D +Y P+ T+LL EAE +G IV+G+ M + Q E ++ +TGL +M A + + F
Sbjct: 230 LVVSDVIYNPRKTKLLEEAEAAGCKIVTGIGMLLWQGVEAFKLYTGL--EMPAKEVDELF 287
>gi|433772242|ref|YP_007302709.1| shikimate 5-dehydrogenase [Mesorhizobium australicum WSM2073]
gi|433664257|gb|AGB43333.1| shikimate 5-dehydrogenase [Mesorhizobium australicum WSM2073]
Length = 285
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+ HS+SP+++ G +G + + + ++ A+F T +N + G + TIPHK
Sbjct: 10 VTGHPIKHSRSPMIHGHWLAKHGIDGSYQAIDVAPENFAEFLATLQANGYRGGNVTIPHK 69
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
EAA D A IGAVN + DG L+G NTD G + ++D + G
Sbjct: 70 EAAFAGVARRDHAADEIGAVNTLW--FEDGTLWGGNTDGHGFAANLDD------HAPGWA 121
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALSLA 432
++ A VV+GAGGA +A+ + KA+G + I NRT RA EL + G A LA
Sbjct: 122 ANGPA----VVLGAGGAARAVIHALKARGLGDIRIVNRTLARAIELRDRFGAGVSAHPLA 177
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
D +L NTT++GMQ D PK L +A+V D VY P T LL A
Sbjct: 178 ATGELL-RDAGLLVNTTALGMQGNGDLAADPK-GLPAHAVVNDIVYVPLETPLLAAARAR 235
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
G V GL M + QA +ER+ G+ K+ A
Sbjct: 236 GLKTVDGLGMLLNQAVPGFERWFGVRPKVTA 266
>gi|402771674|ref|YP_006591211.1| shikimate 5-dehydrogenase [Methylocystis sp. SC2]
gi|401773694|emb|CCJ06560.1| Shikimate 5-dehydrogenase [Methylocystis sp. SC2]
Length = 280
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 134/274 (48%), Gaps = 33/274 (12%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPH 314
G++G P+ HS+SP ++N F G G + L V+ + + + FAG + TIPH
Sbjct: 11 GVMGWPIAHSRSPKIHNHWFAQYGIEGCYAPLPVEPGRLEAALRAMPALGFAGCNLTIPH 70
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KE A++ D VD A IGAVNCI+ + +G L G N D G I+++ +
Sbjct: 71 KETALQFLDHVDDSAARIGAVNCIV-VERNGALIGRNYDGYGFIASLYE----------- 118
Query: 375 VSSALAGKLF-------VVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG 426
A L+ V+IGAGG +A+ +G GAR + + NRT RA LA G
Sbjct: 119 -----AAPLWRAERAPCVIIGAGGGARAIVHGLLEAGAREIRLFNRTLARAEILAADFGP 173
Query: 427 HALSLA-DLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKIT 483
+L D +L N TS GM QP +D + AL ALV D VY P T
Sbjct: 174 RVSALRWDERQAGLAGAGLLVNATSQGMVGQPPLD---LSLAALPTSALVADIVYAPLET 230
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LL A + GAT V GL M + QA + +TG+
Sbjct: 231 PLLAAARKHGATPVDGLGMLLHQARPAFRDWTGV 264
>gi|325280796|ref|YP_004253338.1| Shikimate dehydrogenase substrate binding domain-containing protein
[Odoribacter splanchnicus DSM 20712]
gi|324312605|gb|ADY33158.1| Shikimate dehydrogenase substrate binding domain protein
[Odoribacter splanchnicus DSM 20712]
Length = 247
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 30/265 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTI 312
+++GIIG P+GHS SP +NE F+ + + DI + D GF+ TI
Sbjct: 2 QIYGIIGYPLGHSCSPRYFNEKFQKENIAAEYRSFEMPDIRQLPTLLQQTPDLCGFNVTI 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLN 370
PHK+ + DE+ A++IGAVNC+ +G L GYNTD G A+ +
Sbjct: 62 PHKQNILPFLDEISEEARAIGAVNCVKVSHPNGHPYLVGYNTDMYGFRKALLEF------ 115
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
+ +S AL ++G GGA KA+ Y + V +RT +A E+ G+A +
Sbjct: 116 IPAAISKAL------ILGNGGAAKAVRYALHSLNMEVSTVSRTPRQADEI-----GYA-A 163
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDE-TPIPKHAL--GHYALVFDAVYTPKITRLLR 487
L DL P ++ NTT +G P E P+P L GHY +FD VY P+ T ++
Sbjct: 164 LPDLITGYP----LIVNTTPLGTWPDTSEFPPLPYELLTAGHY--LFDLVYNPETTTFMQ 217
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ +GA +G M++GQA + +E
Sbjct: 218 KGRAAGAHACNGYAMWLGQAEKNWE 242
>gi|13542148|ref|NP_111836.1| shikimate 5-dehydrogenase [Thermoplasma volcanium GSS1]
gi|74575260|sp|Q978S5.1|AROE_THEVO RecName: Full=Shikimate dehydrogenase
gi|14325579|dbj|BAB60482.1| shikimate 5-dehydrogenase [Thermoplasma volcanium GSS1]
Length = 267
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 22/268 (8%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL-LVDDIAKFFQTYSSNDFAG 307
M P VFG+IG PV HS I+YN F+ G N +++ + + + K+F +Y+S G
Sbjct: 1 MMPPDYVFGLIGHPVSHSIGQIVYNRYFQKKGLNAIYLSIDIFPETLKYFMSYASK-MDG 59
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
F+ TIPHK + + D++D A+SIG+VN + + DG L G+NTDY G IE +
Sbjct: 60 FNVTIPHKISIMDYLDQIDWEARSIGSVNLV--KTEDGLLKGFNTDYYG----IEYMFK- 112
Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
GGV ++GK VV G+GG + + + A+ V +AR++
Sbjct: 113 ----KGGVD--VSGKSIVVAGSGGIARTVIHYLIKNNAKSVTV-----KARDVKLAKNKL 161
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
D++ + D I N T +G + D P P+ G + D VY P +T L+
Sbjct: 162 NAYDVDIKEYANNDYDIYINCTPLGTEAVGD--PFPEVQFGKGKIAVDVVYNPPVTPFLK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFT 515
A SG+ +SGL+++IGQA + + T
Sbjct: 220 RAGISGSKTLSGLDLYIGQAIKTLDILT 247
>gi|73662471|ref|YP_301252.1| shikimate 5-dehydrogenase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642725|sp|Q49Y37.1|AROE_STAS1 RecName: Full=Shikimate dehydrogenase
gi|72494986|dbj|BAE18307.1| shikimate 5-dehydrogenase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 265
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 136/269 (50%), Gaps = 25/269 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
+ +IG P+ HS SP+++N F ++ + +++ +D + + + +GF+ TIP
Sbjct: 3 YAVIGNPIDHSLSPVMHNANFAALNDLSSYEAINIRNEDFHRIKEIINDKALSGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKE + DE+D +K++GAVN + + DGK GYNTD +G ++ GLR
Sbjct: 63 HKERIIPYLDEIDEQSKTVGAVNTV--KIVDGKWIGYNTDGIGYVT----GLR------- 109
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTYDRARELAETVGGHALSLA 432
V L +++GAGGA K LA K ++ +ANR+ DR V +L A
Sbjct: 110 QVYPDLEDAYILILGAGGASKGLANELKKFVRPKLTVANRSMDRFESWQLEVNKISLQEA 169
Query: 433 D--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
+ L F+ I+ NTT GM E I L + LV D VY P T +L AE
Sbjct: 170 EAALSEFD-----IIINTTPAGMNQN-KEVIINLDNLDSHTLVSDIVYVPFKTPILEIAE 223
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTG-LP 518
G I +GL+MF+ Q E Y +TG LP
Sbjct: 224 AKGNPIHNGLDMFVYQGAESYRIWTGELP 252
>gi|138896097|ref|YP_001126550.1| shikimate 5-dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|134267610|gb|ABO67805.1| Shikimate 5-dehydrogenase [Geobacillus thermodenitrificans NG80-2]
Length = 276
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 21/269 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV---DDIAKFFQTYSSNDFAGFSCT 311
V+G++G PV HS SP+++N+AF G + + HL + + + + AG + T
Sbjct: 4 VYGLLGFPVEHSLSPLMHNDAFAYFGISARY-HLFSVNPEQVGEAIAGVRALGIAGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN I+ G+L GYNTD G + A+E+ + L+
Sbjct: 63 IPHKMAVIPFLDEVDEHARRIGAVNTIV--NDSGRLIGYNTDGPGYVKALEEEMDIHLD- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAREL---AETVGGH 427
GK ++IGAGG + + + + A R+ IANRT ++A L +
Sbjct: 120 ---------GKRILLIGAGGGARGIYFSLLSTAAERIDIANRTAEKAARLIGEGDERRST 170
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
LA+ E E +I+ NTTS+GM P VDE P+ + +V D +Y P T+ L+
Sbjct: 171 FFPLAEAERRLAEYDIII-NTTSVGMHPHVDEQPLSLQQMRPGTVVSDIIYNPLETKWLK 229
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+ GA + +G+ M + Q +E++TG
Sbjct: 230 EAKARGARVQNGVGMLVYQGALAFEKWTG 258
>gi|385809656|ref|YP_005846052.1| shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
gi|383801704|gb|AFH48784.1| Shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
Length = 290
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 147/282 (52%), Gaps = 28/282 (9%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFA 306
M T++ G++G P+ H+ SP ++N AF+ G + +++ +++ ++ + + +
Sbjct: 5 MHLKTQLVGLVGHPIKHTYSPFIHNVAFELTGLDYIYLPFNVIPSNLKSAIKGLVALGYK 64
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
GF+ TIPHK + +V A +GA+N ++ + GK+FGYNTD G + ++
Sbjct: 65 GFNVTIPHKVKVKEFMSKVSEEASFVGAINTVLIEE--GKMFGYNTDVAGVLESLY---- 118
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG--AKAKGARVVIANRTYDRARELAE-- 422
+A VVIGAGG+ +A+ Y + +R+ + NRT RA L +
Sbjct: 119 -------AYRKEIADNECVVIGAGGSARAVIYTLIKHFRPSRIHLVNRTEQRAETLRQFF 171
Query: 423 -------TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHAL-GHYALVF 474
+ + L D+++ ++ +++ N TS+GM P D+ + + L +VF
Sbjct: 172 KTKIKFDSFTVNELIPPDIKDI-IKNSVLIVNATSVGMHPDEDDAVLTQKDLFSKEQIVF 230
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
D VY P T+LL+ AE +GA V G++M + QA + +E +TG
Sbjct: 231 DLVYNPAQTKLLKLAESAGAKTVDGIKMLVNQAAKSFEIWTG 272
>gi|196248990|ref|ZP_03147690.1| shikimate 5-dehydrogenase [Geobacillus sp. G11MC16]
gi|196211866|gb|EDY06625.1| shikimate 5-dehydrogenase [Geobacillus sp. G11MC16]
Length = 276
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 21/269 (7%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV---DDIAKFFQTYSSNDFAGFSCT 311
V+G++G PV HS SP+++N+AF G + + HL + + + + AG + T
Sbjct: 4 VYGLLGFPVEHSLSPLMHNDAFAYFGISARY-HLFSVKPEQVGEAIAGVRALGIAGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DEVD A+ IGAVN I+ G+L GYNTD G + A+E+ + L+
Sbjct: 63 IPHKMAVIPFLDEVDEHARRIGAVNTIV--NDSGRLIGYNTDGPGYVKALEEEMDIHLD- 119
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAREL---AETVGGH 427
GK ++IGAGG + + + + A R+ IANRT ++A L +
Sbjct: 120 ---------GKRILLIGAGGGARGIYFSLLSTAAERIDIANRTAEKAARLIGEGDERRST 170
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
LA+ E E +I+ NTTS+GM P VDE P+ + +V D +Y P T+ L+
Sbjct: 171 FFPLAEAERRLAEYDIII-NTTSVGMHPHVDEQPLSLQQMRPGTVVSDIIYNPLETKWLK 229
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
EA+ GA + +G+ M + Q +E++TG
Sbjct: 230 EAKARGARVQNGVGMLVYQGALAFEKWTG 258
>gi|150388897|ref|YP_001318946.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|166988267|sp|A6TM69.1|AROE_ALKMQ RecName: Full=Shikimate dehydrogenase
gi|149948759|gb|ABR47287.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 286
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 25/276 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
T++ G++G PV HS SP+++N AF+ +G + V++ V D++ + + D AGF+
Sbjct: 9 TRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVAGFNV 68
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P+K+ + DE+ A+ IG+VN ++ + +G L GYNTD G + + D
Sbjct: 69 TMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDGKGYVMGLADE------ 120
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGH-- 427
G+S GK V+ GAGGA K++A +GA+ + I NRT + A E+ + +
Sbjct: 121 ---GISPE--GKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNIINKNIP 175
Query: 428 -----ALSLADLE-NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTP 480
A D E ++ + N T++GM +++ I + H L+ D VY P
Sbjct: 176 TCKTSATGYEDNELKQQLKEADLFINCTNLGMGSHEEKSIISSTDILHPDLIVSDVVYAP 235
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
T+LL AEE G ++GL M IGQ ++ +TG
Sbjct: 236 PKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTG 271
>gi|365891052|ref|ZP_09429522.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365333035|emb|CCE02053.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 293
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-----IAKFFQTYSSNDFAGFSCT 311
G+IG P+ HS SP ++ A ++G + + V +A + FAG + T
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
P+KEA V DE+ A ++GAVN ++ R DG+L G+NTD G A+E
Sbjct: 75 YPYKEAVVALLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTTGFERAVEP-------- 124
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----G 426
+ S G++ +IGAGG GKA+A+ G V R +D R A+ + G
Sbjct: 125 ---LISRTGGRVVALIGAGGVGKAIAFALANLG---VSDLRIFDTERARADKLASLLPAG 178
Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
++++AD + + + N T IGM P TP+P H L V DAVY+P T LL
Sbjct: 179 PSITVADSVEQALQGAVGVVNGTPIGMLPN-RGTPVPDHLLRADLWVADAVYSPLWTPLL 237
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTGL 517
+ A+ GA ++ G E+ I QA + +E FTGL
Sbjct: 238 KAAKAKGAQVLLGRELAIYQAADAFELFTGL 268
>gi|307721327|ref|YP_003892467.1| shikimate dehydrogenase [Sulfurimonas autotrophica DSM 16294]
gi|306979420|gb|ADN09455.1| shikimate dehydrogenase [Sulfurimonas autotrophica DSM 16294]
Length = 264
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
+K+F I G PV HS+SP+++N FK++ + + L++D K +T+ + G + T+
Sbjct: 2 SKLFSIFGNPVSHSRSPLMHNAVFKNLNYKACYTRTLLEDDTKLKETFFALGLDGANVTV 61
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE+A + CDE+ AK IG VN +I +GKL GYNTD G + AI D + N+
Sbjct: 62 PHKESAYEACDEIRGFAKKIGVVNTLINE--NGKLIGYNTDADGFMYAI-DEFKDIKNI- 117
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
+V+GAGG KAL +G V I NR+ R E + +
Sbjct: 118 ------------LVLGAGGTAKALVQKFLEEGLHVSILNRSEARLSYF-EKLNCECYT-- 162
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKH----ALGHYALVFDAVYTPKITRLLRE 488
ENF + ++ NTTS G+ K + P PK L + DA+Y KIT L+
Sbjct: 163 -WENFVLKQYDLVVNTTSAGL--KDENFPAPKEIIETILNNTRYAADAIY-GKITPFLQL 218
Query: 489 AEESGATIVSGLEMFIGQAYEQYERF 514
A+E T G +M +GQ E F
Sbjct: 219 AKEKQLTCKDGSDMLLGQGVLANELF 244
>gi|291296199|ref|YP_003507597.1| shikimate 5-dehydrogenase [Meiothermus ruber DSM 1279]
gi|290471158|gb|ADD28577.1| shikimate 5-dehydrogenase [Meiothermus ruber DSM 1279]
Length = 271
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 143/265 (53%), Gaps = 20/265 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY---SSNDFAGFSCTI 312
G+IG PVGHS SP ++ A ++ G G + L + F + F G + TI
Sbjct: 3 LGLIGFPVGHSLSPAMHQAALRAAGLEGSYRAL--ETPPSFLRARLQEVRRAFTGVNVTI 60
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
PHKE+ + DE+ A +IGAVN I+ Q G+L GYNTD +G I+ +++
Sbjct: 61 PHKESVLAYLDELSPEAAAIGAVNTIVCEQ--GRLIGYNTDAMGFIAGLDE--------- 109
Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
G+ A K +++GAGGA +A+AY K +GA V + NRT +RAR L +G H ++
Sbjct: 110 AGI--AYRNKKALLLGAGGAARAVAYALKEEGAHVAVYNRTTERARALCAAMGLHLVTEP 167
Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
LE +L NTTS+G+ +P+P L +V D +Y P+ TRLL EA+++
Sbjct: 168 LLEAAV-RSCDLLVNTTSVGLN-DPTRSPLPPGLLPRAGVVVDIIYHPQTTRLLLEAQQA 225
Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
G + GL M + Q +E +TG+
Sbjct: 226 GLVTLGGLPMLVWQGALAFELWTGV 250
>gi|422809569|ref|ZP_16857980.1| Shikimate 5-dehydrogenase I alpha [Listeria monocytogenes FSL
J1-208]
gi|378753183|gb|EHY63768.1| Shikimate 5-dehydrogenase I alpha [Listeria monocytogenes FSL
J1-208]
Length = 273
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 142/266 (53%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G N + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDA--FETEIKKLMDSGVRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE++ +A + GAVN +++++ GK +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELEDLAAASGAVNTVLKKE--GKWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELA-ETVGGHALSL 431
+ S ++ GAGGA KA+ + A++ +ANRT ++A E+ + HA++L
Sbjct: 112 -IRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E D I+ TTSIG++ +++PI + + D +Y P T L+EA++
Sbjct: 171 EEAEK-QLADFTIIIQTTSIGLEASKNKSPISLANVKKGTICSDIIYNPDETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA +GL MF+ Q +E +TG+
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGI 255
>gi|126660700|ref|ZP_01731799.1| shikimate 5-dehydrogenase [Cyanothece sp. CCY0110]
gi|126617998|gb|EAZ88768.1| shikimate 5-dehydrogenase [Cyanothece sp. CCY0110]
Length = 288
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 25/278 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ GIIG PV HS SP++ N + +G + +++ V +++ +++ GF+
Sbjct: 8 TKLLGIIGHPVEHSLSPVMQNAEIERLGVDYIYIPFPVKPENLQTALDGFATIGVMGFNA 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + EV T AK +GAVN + R ++ K G NTD +G ++ ++ R
Sbjct: 68 TIPHKQAIIPLLSEVTTTAKLVGAVNTVWRTETGWK--GTNTDVIGFVTPLKALNRDWNT 125
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL 429
+ +++G GGA +A+ G G R + + R D+ + ++ L
Sbjct: 126 IKP-----------IILGNGGAARAVVVGLVELGCRHICVVGRDKDKLGQFKQSWDNSEL 174
Query: 430 SLA-DLENFNPEDGMI-----LANTTSIGMQPKVDETPIPKHALGHY---ALVFDAVYTP 480
+ + +++ GM+ + NTT IGM P D +P+ + A+ +D +Y P
Sbjct: 175 QASITVHSWDELSGMVSESQLIVNTTPIGMFPHTDNSPVDSDLWDKFSNTAIAYDLIYNP 234
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
T+ L++A++ G TI+ GL+M + Q E + P
Sbjct: 235 SPTQFLKDAKQQGLTIIDGLDMLVYQGAAALEIWLQQP 272
>gi|210622509|ref|ZP_03293214.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
gi|210154222|gb|EEA85228.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
Length = 294
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 153/290 (52%), Gaps = 34/290 (11%)
Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQ 298
++ NF +T++F ++G PV +S SP +++ F+ G NG ++ ++ I K +
Sbjct: 5 IERRNFMGTNSETRIFALLGHPVSNSFSPNMHSYLFEKYGVNGAYLCFDIEPRKIYKTVE 64
Query: 299 TYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAI 358
+ + GF+ TIP+K + DE+D A+ IGAVN + + DG L GYNTD G +
Sbjct: 65 SMRILNAVGFNVTIPYKTDIMAGLDEIDRNAELIGAVNTV--KNEDGVLKGYNTDGRGFV 122
Query: 359 SAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRA 417
AI D N+S + GK +++G+GGA +++A + G ++ I NR+ + A
Sbjct: 123 KAIID-----RNIS------IIGKSALILGSGGACRSIAIEMASNGIGKIDIRNRSLENA 171
Query: 418 RELAETVGG----------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH-A 466
++A+ V ++ DLE ++ L NTT IGM+ K E PI +
Sbjct: 172 EKIAKRVNSVFGTEVVYSKEVVTKNDLEKYD-----FLINTTPIGMESK--ECPIDEGIE 224
Query: 467 LGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
+ +V+D VY P T L++ AE++ ++ G++M I Q + +E +TG
Sbjct: 225 VDSDIVVYDIVYKPHRTNLIKWAEKNNLKVIHGIDMLINQGIDAFEIWTG 274
>gi|297584671|ref|YP_003700451.1| shikimate 5-dehydrogenase [Bacillus selenitireducens MLS10]
gi|297143128|gb|ADH99885.1| shikimate 5-dehydrogenase [Bacillus selenitireducens MLS10]
Length = 277
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 28/274 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCT 311
++FG+ G P+ HS SP ++ A G +G + H+ + + + + G + T
Sbjct: 3 QIFGVFGDPIEHSMSPAMHEAALSHAGIDGAYHAFHVKPEGLQDAVKGVRALGIRGVNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK +K D +D +A+ IGAVN I+ DG L G+NTD G + +GLR L
Sbjct: 63 IPHKVDVMKHLDAIDPLAERIGAVNTIV--NDDGVLTGFNTDGAGYL----EGLRPLL-- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHA-- 428
+ L ++IGAGGA +A+A +K + + +ANRT +A ELA+ +A
Sbjct: 115 ----THPLTDMRVLIIGAGGAARAVAMTLASKEVKELYVANRTETKAGELAKACKPYAAS 170
Query: 429 ------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
L+ A L F+ ++ NTTS+GM P VD PI LG +V D +Y P
Sbjct: 171 RSLTLSLAQARLMEFD-----LVINTTSVGMSPNVDNIPISLEMLGRDTIVTDLIYNPME 225
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
TRLL+ A + GA +GL MF+ Q +E++TG
Sbjct: 226 TRLLKMARQKGAKTQNGLNMFVLQGGLAFEKWTG 259
>gi|153008187|ref|YP_001369402.1| shikimate 5-dehydrogenase [Ochrobactrum anthropi ATCC 49188]
gi|151560075|gb|ABS13573.1| shikimate 5-dehydrogenase [Ochrobactrum anthropi ATCC 49188]
Length = 292
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
+ G P+ HS+SP+++ +G +G + + + +D + F + + N FAG + TIPHK
Sbjct: 7 VTGFPIRHSRSPLIHGFWLDELGIDGSYEAIEVKPEDFSFFASSLAENGFAGGNVTIPHK 66
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
EAA + +D AK+IGAVN + +G+L G NTD G + ++ G N
Sbjct: 67 EAAYAAVESLDEAAKAIGAVNTLWLE--NGRLHGGNTDAYGFAANLDASASGWDN----A 120
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLA-D 433
SAL V+GAGGA +A+ + ++G +V I NRT RA++LA G + D
Sbjct: 121 DSAL------VLGAGGASRAIVHALLSRGFKKVAIVNRTVSRAQDLATHFGPRVSAYGWD 174
Query: 434 LENFNPEDGMILANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEE 491
D ++ NTTS+GM ++ P+ A+ D VY P T L++AEE
Sbjct: 175 AAQKLVSDAGLIVNTTSLGMSGHDEQEVFPLDLGKASRKAVATDIVYVPLKTPFLKKAEE 234
Query: 492 SGATIVSGLEMFIGQAYEQYERFTG 516
+G V GL M + QA +ER+ G
Sbjct: 235 AGLVTVDGLGMLLHQAVPGFERWFG 259
>gi|402701993|ref|ZP_10849972.1| shikimate/quinate 5-dehydrogenase [Pseudomonas fragi A22]
Length = 271
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 133/259 (51%), Gaps = 22/259 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
I+G P S S ++N A+ ++G + FV V+D + G + ++P+K A
Sbjct: 12 IMGSP--FSLSAKIHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTA 69
Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
+ D +D A+ IGAVN I DG L GYNTDY+GAI A+++ V+G
Sbjct: 70 VMPHLDAIDESARVIGAVNTI--NNVDGVLTGYNTDYLGAIRALQE-------VTG---- 116
Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
L K VIGAGGA +A+ +G ARV + NRT +R LAE +G A +E F
Sbjct: 117 -LRDKRIAVIGAGGAARAVVFGCLQAAARVTLFNRTAERGTALAEDLG--ARWGGSVEAF 173
Query: 438 NPEDGMILANTTSIGM-QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI 496
+ I+ N TS+G QP D P+ L + +V D + P T LL++A+ G T
Sbjct: 174 TASNFDIVINATSVGFKQP--DSNPLDGR-LASHLIVMDVAFMPVHTALLQQAKALGCTT 230
Query: 497 VSGLEMFIGQAYEQYERFT 515
V+G M + QA Q E +T
Sbjct: 231 VAGTRMLVHQACRQIELYT 249
>gi|408356445|ref|YP_006844976.1| shikimate dehydrogenase [Amphibacillus xylanus NBRC 15112]
gi|407727216|dbj|BAM47214.1| shikimate dehydrogenase [Amphibacillus xylanus NBRC 15112]
Length = 276
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 136/269 (50%), Gaps = 21/269 (7%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
G+IG PV HSKSP ++ G + + + D + ++D +GF+ TIP
Sbjct: 3 LGLIGYPVQHSKSPWIHQHFLSETNLTGNYQLIEIHPDQFDEEIMKLKASDLSGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+KE + DE+ A+ IGAVN ++ R + + +G NTD G ++A+++
Sbjct: 63 YKEKIIPYLDEISPAAQKIGAVNTVVCR--NNRWYGDNTDGRGLVTALKEQFPELFT--- 117
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAET----VGGHA 428
K +++GAGGA + + Y + +VIANRT RA+ L + + A
Sbjct: 118 ------GDKSVLILGAGGASRGIYYALLNEEFEEIVIANRTVIRAQALIDANPSGISSAA 171
Query: 429 LSLADLE-NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
+S ++ E N D +I TTS+GM P ++E I L A+V D VY P T+LLR
Sbjct: 172 ISFSEAEAKLNQFDLVI--QTTSVGMTPHIEEQVIDLSRLKPGAVVSDIVYQPFWTKLLR 229
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A+ G + G EM I QA +E ++G
Sbjct: 230 DAKARGGRVHHGHEMLIYQAKLAFEMWSG 258
>gi|402302379|ref|ZP_10821493.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
gi|400380598|gb|EJP33412.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
Length = 286
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 134/278 (48%), Gaps = 29/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND--FAGFSC 310
TK+ G++G P+ HS SP+L N A ++ G + V+V L V A D F GF+
Sbjct: 6 TKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKREALRSAVLGLRDAGFCGFNV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP K + D +D A+ IGAVN ++ +DG+L G+NTD G ++
Sbjct: 66 TIPFKTEIIAVLDTLDEDARRIGAVNTVV-VGADGRLTGHNTDTAGFLAGF--------- 115
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
+ GVS L G VV GAGGA +A+ G +A A+V I R + +L
Sbjct: 116 TACGVS--LRGAHAVVFGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCADFAAD-- 171
Query: 430 SLADLENFNPEDGM---------ILANTTSIGMQPKVDETPIPKHALGH-YALVFDAVYT 479
D+ F +D +L TT +GM P +E P A+ H A V+D +YT
Sbjct: 172 --GDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLIYT 229
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
P TR LREA G V+G M Q E + +TG+
Sbjct: 230 PAETRFLREAARHGHRCVNGETMLAAQGAEAFFLWTGV 267
>gi|448677985|ref|ZP_21689175.1| shikimate 5-dehydrogenase [Haloarcula argentinensis DSM 12282]
gi|445773660|gb|EMA24693.1| shikimate 5-dehydrogenase [Haloarcula argentinensis DSM 12282]
Length = 265
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 27/269 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LVDDIAKFFQTYSSNDFAGFSCT 311
V+G+IG PVGHS SP ++ ++++G + +V D A+ + + G + T
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAGYEALGLDARYVTFEPAADSGAEAIEAAETLGIDGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ + D +A+ IGAVN + G GYNTD VGA+ A+E +V
Sbjct: 62 IPFKQDVLDAVDPA-PLAERIGAVNTV--DFDGGTPTGYNTDAVGAVRALE-----HHDV 113
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
S ++ + G +A+A+G +G V IANRT +A LA+ V GH
Sbjct: 114 SLSGTAVVVGAGGAG-------RAVAFGLADEGLSVRIANRTESKADALADEVPDASGHG 166
Query: 429 L-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
L SL DL D +L N TS+GM+ D TP+P AL V DAVYTP TRLL+
Sbjct: 167 LNSLPDLL----ADADVLVNCTSVGMEE--DTTPVPADALHGDLAVLDAVYTPIETRLLQ 220
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+A +GAT V G M + Q E +ER+TG
Sbjct: 221 DAAAAGATTVDGAWMLLYQGVEAFERWTG 249
>gi|169829301|ref|YP_001699459.1| shikimate dehydrogenase [Lysinibacillus sphaericus C3-41]
gi|238688192|sp|B1HUI4.1|AROE_LYSSC RecName: Full=Shikimate dehydrogenase
gi|168993789|gb|ACA41329.1| Shikimate dehydrogenase [Lysinibacillus sphaericus C3-41]
Length = 276
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 146/267 (54%), Gaps = 16/267 (5%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HSKSP ++N F+ + ++ H+ + + + +G++ T
Sbjct: 3 KWFAVIGDPIEHSKSPAMHNAWFEEMSVEATYIPLHVSSEQLGAAVAGLKTLGASGWNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DE+D +A+ +GAVN ++R ++GKL GYNTD VG + ++E+
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TEGKLIGYNTDGVGFVRSLEEA------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG-GHAL 429
V S+ K +++GAGGA + +A+ + +G + + + NRT A+ + + +G G A+
Sbjct: 115 ---VGSSHKDKPVLLVGAGGAARGIAFAMQQQGYSDLTMTNRTVANAQAIVDEMGIGRAI 171
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SL + E +I+ TS G+ P + L A+V D VY P +T L+ A
Sbjct: 172 SLKEAEETLAHFSIIV-QMTSAGLATGNFSMPFSLNRLAKGAIVADIVYNPLMTPFLQAA 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
EE GATIV+GL MF+ Q +E + G
Sbjct: 231 EEKGATIVTGLGMFVHQGAIAFEHWLG 257
>gi|329764791|ref|ZP_08256384.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138704|gb|EGG42947.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 273
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 148/279 (53%), Gaps = 24/279 (8%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
+K F +IG P+ HS SP +++ AF+ + + ++ + ++ + ++ GF+
Sbjct: 2 SKTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKGELEEGVESLKKIKIDGFNV 61
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK +K D++D IGAVN + +G L GYNTD G + + + N
Sbjct: 62 TIPHKIEMMKYIDKLDDSCSIIGAVNTV--SNDNGILKGYNTDMDGFLEPFK-----KKN 114
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRAREL---AETVGG 426
+S + K +++GAGGA +A+ G AK + IANRT A L ++ +G
Sbjct: 115 LS------IKNKKILLLGAGGAARAIVAGCAKEHAQTITIANRTIQNANNLVNFSKKIGL 168
Query: 427 HALSLADLENF--NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
A+++ +E+ ++ ++ N TS+G+ K + +PI + +V+D VY P T
Sbjct: 169 DAIAIK-IEDVGDTAKNYDVIVNATSVGL--KNEPSPISLEEINPKTIVYDIVYMPINTD 225
Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
LL++A+E GATI+ G EM +GQA +E + G+ NA
Sbjct: 226 LLKKAKEKGATIIYGYEMLLGQATRAFEIWHGIEAPYNA 264
>gi|126653885|ref|ZP_01725732.1| shikimate 5-dehydrogenase [Bacillus sp. B14905]
gi|126589610|gb|EAZ83749.1| shikimate 5-dehydrogenase [Bacillus sp. B14905]
Length = 276
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 16/267 (5%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCT 311
K F +IG P+ HSKSP ++N F+ + + ++ H+ + + + +G++ T
Sbjct: 3 KWFAVIGDPIEHSKSPAMHNAWFEEMSIDATYIPIHVSSEQLESAVAGLKTLGASGWNVT 62
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IPHK A + DE+D +A+ +GAVN ++R ++GKL G+NTD VG + ++E+
Sbjct: 63 IPHKTAIIPYLDELDELAQKMGAVNTVVRT-TNGKLKGFNTDGVGFVRSLEEA------- 114
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG-GHAL 429
V S+ K +++GAGGA + +A+ + +G + I NRT A+ + + +G G A+
Sbjct: 115 ---VGSSHKDKPVLLVGAGGAARGIAFAMQQQGYNDLTITNRTVANAQAIVDEMGIGRAI 171
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
SL + E E +I+ TS G+ P + L A+V D VY P +T L+ A
Sbjct: 172 SLKEAEETLAEFSIIV-QMTSAGLATGNFSMPFSLNRLEKGAIVADIVYNPLMTPFLQAA 230
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTG 516
EE GATIV+GL MF+ Q +E + G
Sbjct: 231 EEKGATIVTGLGMFVHQGAISFEHWLG 257
>gi|386050466|ref|YP_005968457.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|346424312|gb|AEO25837.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
Length = 273
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 22/266 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT----YSSNDFAGFSCTIP 313
+IG P+ HS SP + N F+ +G N + +L+++ A F+T + GF+ T P
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDA--FETEIKKLMDSGVRGFNITTP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
KE + DE+D +A + GAVN +++++ K +G+NTD G + +E+
Sbjct: 64 FKERILPFLDELDNLAAASGAVNTVLKKED--KWYGFNTDGKGYLEGLEE---------- 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELA-ETVGGHALSL 431
+ S ++ GAGGA KA+ + A++ +ANRT +A E+ + HA++L
Sbjct: 112 -IRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTKKAIEMTKDNNNHHAITL 170
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
+ E D I+ TTSIG++ +++PI + + D +Y P T L+EA++
Sbjct: 171 EEAEK-QLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKK 229
Query: 492 SGATIVSGLEMFIGQAYEQYERFTGL 517
+GA +GL MF+ Q +E +TG+
Sbjct: 230 NGAITQNGLPMFVNQGALAFEIWTGI 255
>gi|451945875|ref|YP_007466470.1| 3-dehydroquinate dehydratase [Desulfocapsa sulfexigens DSM 10523]
gi|451905223|gb|AGF76817.1| 3-dehydroquinate dehydratase [Desulfocapsa sulfexigens DSM 10523]
Length = 229
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 128/228 (56%), Gaps = 9/228 (3%)
Query: 21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
K+ + ICV I S+D + + + A+ AD++EIRLD L + TL P
Sbjct: 2 KSHSRICVSIGRSSIDDALA-IADSVAAQADVLEIRLDFLHTPAVSPFVNTL----RTPL 56
Query: 81 LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE-KCKV 139
LFT RP WEGG++ G E +R+ L A+ Y+D+EL + + +R E + K+
Sbjct: 57 LFTNRPDWEGGEFVGKEEQRIGPLLEAVTENCGYVDLELLAPDDSHQRMRMALQESRTKL 116
Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-VHSQV--PI 196
I+S HN++ TP+ E+L +A +Q GADI K TTA DV RV Q+ V Q+ P+
Sbjct: 117 ILSWHNFKDTPTREELVGRMALMQDKGADIGKIITTAHSHRDVLRVLQLQEVAEQLGFPL 176
Query: 197 IGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
I MG G++SR+ + GG++T+ ++ + +APGQ ++ L +++
Sbjct: 177 IAFCMGRPGVVSRVATCELGGYMTYCSVSDDEATAPGQLSVGSLREIH 224
>gi|430005752|emb|CCF21555.1| Shikimate dehydrogenase [Rhizobium sp.]
Length = 276
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 137/268 (51%), Gaps = 23/268 (8%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSND--FAGFSCTIP 313
+ G PV HS+SP+++ K+ G G + V D F S +AG + TIP
Sbjct: 4 VAGWPVKHSRSPLIHRHWLKTFGIEGDYRLEPVKPADFPAFVADLKSGASIYAGGNVTIP 63
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
HKEAA D DTVA+ +GA N + R DG+L NTD G + +++ G VS
Sbjct: 64 HKEAASALADRCDTVAEELGAANTLWR--EDGRLCATNTDVHGFAANLDERHPGWDKVSR 121
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HALS 430
V V+GAGGA +A+ + +G + + + NRT RA ELA+ G HA S
Sbjct: 122 AV----------VLGAGGASRAVIRAFRDRGISEINVVNRTLSRAAELADRFGPTIHAHS 171
Query: 431 LADLENFNPEDGMILANTTSIGMQPK-VDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
+A L G+ + NTTS+GM + V E ++G ALV D VY P T +L++A
Sbjct: 172 MAALPEVIQGAGLFV-NTTSLGMDGQDVPEIDFSTMSIG--ALVTDIVYVPLQTPILKQA 228
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
E G V GL M + QA +ER+ G+
Sbjct: 229 EAQGLATVDGLGMLLHQAVPGFERWFGI 256
>gi|428313606|ref|YP_007124583.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
gi|428255218|gb|AFZ21177.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
Length = 293
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 27/274 (9%)
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSN 303
Q+ TK+ G+IG P+ HS SP+++N A +G + +++ + D+ +++
Sbjct: 1 MSQITGKTKLLGVIGDPIEHSLSPVMHNAAIAEMGLDYIYLPFPIKTADLGVAIAGFAAI 60
Query: 304 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED 363
GFS TIPHK+A + EV +AK GAVN + R + G NTD G ++ ++
Sbjct: 61 GVQGFSVTIPHKQAIISLLSEVSAIAKLTGAVNTVWRTEQGWS--GTNTDVEGFVAPLQ- 117
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAE 422
LN S+ V++G GGA +A+ G G A + + R + + +
Sbjct: 118 ----ALNRDWSQSTP------VILGHGGAARAVVVGCTQLGCAEIHVVGRNVQKLSQFQQ 167
Query: 423 TVGGHALSLA-------DLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYAL 472
+ L + +L P+ +++ N+T +GM P VD++P+ A L A+
Sbjct: 168 SWVNAPLPITLNVHRWDELPELLPQADLVV-NSTPVGMYPNVDQSPLDAAAMELLRPDAI 226
Query: 473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQ 506
+D +YTP T+ L++A+E GA + GLEM + Q
Sbjct: 227 AYDLIYTPNPTQFLQQAQEQGAVAIDGLEMLVQQ 260
>gi|260753372|ref|YP_003226265.1| shikimate 5-dehydrogenase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552735|gb|ACV75681.1| shikimate 5-dehydrogenase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 293
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 140/285 (49%), Gaps = 26/285 (9%)
Query: 243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTY 300
+ N P G+IG P+ HS+SP L+ ++ G NG + V D +A+ +
Sbjct: 1 MSNTENKRPVPATAGVIGWPIAHSQSPALHRFWLEACGINGDYSRFPVHPDHLAQAIKAL 60
Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
+ G + T+PHK+A + DE+D +AK GAVN I+R DG+L GYN+D G + A
Sbjct: 61 PAWGMRGVNVTVPHKQAVIPLLDEIDPLAKKAGAVN-IVRVAEDGRLQGYNSDITGFMEA 119
Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
++ ++ + G+ A F+V G A +A G I NR +++AR L
Sbjct: 120 LQPAIKAQ---GAGLRKA-----FIVGAGGAARAVALGLTEA-GFTCQIVNRNFEKARAL 170
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGM--QPKVDETPIPKHALGH 469
A +G H+L F +DG ++ N T++GM QP +D + +
Sbjct: 171 ARDIGALRGDIEFHSLEDNREPEFTLQDGELGVIVNATTLGMSGQPPLD---LSLEKVDP 227
Query: 470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 514
+LV+D VY P T LL+ A+ G + GL M IGQA +E F
Sbjct: 228 RSLVYDIVYVPLETPLLKAAKARGMQTIDGLSMLIGQAAAAFELF 272
>gi|259417622|ref|ZP_05741541.1| shikimate dehydrogenase [Silicibacter sp. TrichCH4B]
gi|259346528|gb|EEW58342.1| shikimate dehydrogenase [Silicibacter sp. TrichCH4B]
Length = 276
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 139/270 (51%), Gaps = 15/270 (5%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP L+ ++ +G ++ H+ +D+ + F G + TIPH
Sbjct: 10 GVIGCPIAHSKSPQLHRHWLRTHEIDGHYMPMHVEPEDLESVVRMMPKMGFVGANVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
K+A ++ D+V AK +GA N +I + DG + NTD G I+ + +G SG
Sbjct: 70 KQAIMEIADKVTDRAKLMGAANTLIFHE-DGVIVADNTDGYGFITNLHEGAPDWDAKSGP 128
Query: 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD 433
+ V+GAGGA +A+ G + + NRT RA E+AET G +
Sbjct: 129 AT---------VLGAGGASRAVVASLIEAGVPEIRLCNRTRSRAEEIAETFGSKITVVDW 179
Query: 434 LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
++ N ED ++ NTTS+GM + +P L +V D VYTP T LL+ AE++
Sbjct: 180 VQAGNVIEDATLVVNTTSLGMVGQ-RRLRVPLDGLHSGIVVTDLVYTPLKTELLQAAEDA 238
Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
T+V GL M + QA +ER+ G ++N
Sbjct: 239 NCTVVDGLGMLLHQAVPGFERWFGQRPEVN 268
>gi|257877328|ref|ZP_05656981.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257811494|gb|EEV40314.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 282
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 36/290 (12%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PVGHS SP +YN F + + V++ + D +A+ + + + +G +
Sbjct: 9 TKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFKMSG-NV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
T+P K AA + DE+ AK +GA+N I+ + GKL G+ TD VG + D L+
Sbjct: 68 TMPCKTAAAEYMDELTPAAKMVGAINTIVNDE--GKLVGHITDGVGFV----DNLQAH-- 119
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV----IANRTYDRARELAETVGG 426
+ K FVVIGAGGA A+ +GA + I + Y++ +E +
Sbjct: 120 -----DVKMKDKKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGKETVARIKE 174
Query: 427 H----ALSLADL-------ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VF 474
+ A+ + DL E N D L N T++GM TPI L H L V
Sbjct: 175 YYPDLAIEIYDLADQALLAEKINEAD--CLVNATTVGMGEGNTATPIADTDLLHADLTVA 232
Query: 475 DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG--LPGKMN 522
DA+Y P +T+LL++A G V G M IGQ ++ FTG LP K N
Sbjct: 233 DAIYNPPMTQLLKDASAKGCKTVGGKGMLIGQGKAAFKLFTGKELPIKAN 282
>gi|189467980|ref|ZP_03016765.1| hypothetical protein BACINT_04374 [Bacteroides intestinalis DSM
17393]
gi|189436244|gb|EDV05229.1| putative shikimate dehydrogenase [Bacteroides intestinalis DSM
17393]
Length = 248
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 127/265 (47%), Gaps = 32/265 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS + +V+ + +I F + N + G + TIP+
Sbjct: 4 YGLIGYPLRHSFSIGYFNEKFKSENIDAEYVNFEIPNINDFMEVIEENPNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +IE L+
Sbjct: 64 KEQVIPFLDELDKDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIEPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ G G V +RT + L
Sbjct: 121 ---------HKKALILGTGGASKAVYRGLANLGIESVFVSRTKKESSHLT---------- 161
Query: 432 ADLENFNPE---DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLR 487
+ PE + I+ N T +GM PKVD P IP L L++D +Y P T ++
Sbjct: 162 --YDELTPEIMQEYTIIVNCTPVGMYPKVDFCPDIPYDQLTPNHLLYDLLYNPNETLFMK 219
Query: 488 EAEESGATIVSGLEMFIGQAYEQYE 512
+ E GA +GLEM + QA+ +E
Sbjct: 220 KGEAHGAVTKNGLEMLLLQAFAAWE 244
>gi|260438487|ref|ZP_05792303.1| shikimate dehydrogenase [Butyrivibrio crossotus DSM 2876]
gi|292809076|gb|EFF68281.1| shikimate dehydrogenase [Butyrivibrio crossotus DSM 2876]
Length = 286
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 140/281 (49%), Gaps = 28/281 (9%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
M T++ +IG PVGHS SP+++N +G N + V D + + + D
Sbjct: 1 MDAKTRLCCLIGNPVGHSLSPMIHNTLADELGINLCYTAFKVEKDRLHEAVAGADAFDIL 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
G + T+PHK +K ++D +A IGAVN ++R DG GYNTD +G +E+
Sbjct: 61 GMNVTVPHKCEIIKELSDIDPLAARIGAVNTLVR--VDGGYKGYNTDAIGLYRELEEE-- 116
Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG 425
+ + K +++GAGGA A+ Y KG A++ + NRT+D+A++LA+ V
Sbjct: 117 ---------NIIIKDKEVIILGAGGASNAITYICADKGAAKIYLLNRTFDKAKKLADDVN 167
Query: 426 GH------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALV---FDA 476
H L+++D PE + TTS G+ P D+ PI Y LV D
Sbjct: 168 SHFGDVVVPLAISDYR-LIPEGKYPVIQTTSCGLYPHNDDAPIYDKEF--YELVEAGVDI 224
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
++ P T ++ +ESGA +GL+M + Q +E + +
Sbjct: 225 IFNPAKTMFMKLCKESGARAYNGLKMLLYQGIAAFELWNDI 265
>gi|448327621|ref|ZP_21516944.1| shikimate 5-dehydrogenase [Natrinema versiforme JCM 10478]
gi|445617587|gb|ELY71182.1| shikimate 5-dehydrogenase [Natrinema versiforme JCM 10478]
Length = 267
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 139/268 (51%), Gaps = 23/268 (8%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
V+G++G PVGHS SP ++ A+ +G +V D DI + AG + T
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELGLEARYVTFEPDEDDIDDAVHGADALGVAGLNVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
IP K+ A++ D +A IGAVN I S G GYNTD VGA+ A+ D
Sbjct: 62 IPFKQDALEIVAPED-LATRIGAVNTIDFSGS-GPPTGYNTDAVGALRALRDH------- 112
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
+ VV+GAGGAG+A+A+G GA V IANRT A ELA+ V GH
Sbjct: 113 ----DVDIEDARAVVVGAGGAGRAVAFGLADAGATVAIANRTEQTAHELADEVPRATGH- 167
Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
LA LE D IL N TS+GM+ D TP+P AL V DAVY P TRLL +
Sbjct: 168 -GLAALEELV-GDADILINATSVGMEE--DATPVPADALHEELAVLDAVYRPLETRLLAD 223
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
A E GAT V G M + Q E +E +TG
Sbjct: 224 AAEVGATTVDGAWMLLYQGVEAFEIWTG 251
>gi|162449910|ref|YP_001612277.1| hypothetical protein sce1639 [Sorangium cellulosum So ce56]
gi|161160492|emb|CAN91797.1| aroE1 [Sorangium cellulosum So ce56]
Length = 258
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 146/263 (55%), Gaps = 21/263 (7%)
Query: 266 SKSPI-----LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
S+ P+ ++ ++++G + ++ V D+ + + G ++P+K+A +
Sbjct: 2 SRHPVTTGAAMHLAGYRALGLDFTYIPFAVTDVEGATRGMRALGIRGLGVSMPYKQAVIP 61
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 380
DE+D VA+ IGAVN I+ DG+L GYNTD++GA+ A+E+ + L
Sbjct: 62 LLDELDPVAERIGAVNTIV--NDDGRLRGYNTDWIGAVRALEE------------VTHLG 107
Query: 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 440
G +++GAGGA +A+A+G +GA V +ANR ++AR+LA VGG A+ L D +P+
Sbjct: 108 GARVLLLGAGGAARAVAFGLAERGASVTVANRDLEKARQLAAAVGGAAVPL-DAAALSPD 166
Query: 441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 500
G +L N TS+GM +P+P+ L LV D VY P IT L+ A GAT V G
Sbjct: 167 HG-VLVNATSLGMAEVDARSPVPEEVLREGLLVMDIVYKPMITELVAAARRRGATAVHGG 225
Query: 501 EMFIGQAYEQYERFTGLPGKMNA 523
M + QA EQ+ +TG ++A
Sbjct: 226 RMLLHQAAEQFRLYTGREPPLDA 248
>gi|83942023|ref|ZP_00954485.1| shikimate 5-dehydrogenase [Sulfitobacter sp. EE-36]
gi|83847843|gb|EAP85718.1| shikimate 5-dehydrogenase [Sulfitobacter sp. EE-36]
Length = 277
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 134/266 (50%), Gaps = 19/266 (7%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSCTIPH 314
G+IG P+ HSKSP ++ K++G G ++ H+ +D+ + + F G + TIPH
Sbjct: 10 GVIGSPIAHSKSPQIHGHWLKTLGLQGAYIPLHVEPEDLRQVLEAMPKMGFIGANVTIPH 69
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG 374
KEA ++ D + A IGAVN I R +DGK+ G NTD G I N+ G
Sbjct: 70 KEAVIEIADIITDRAAMIGAVNTITFR-ADGKIQGDNTDGYGFIE----------NLKAG 118
Query: 375 VSSALAGK-LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLA 432
+ + G V+GAGGA +A+ G +++ANRT RA L +V G+ +++
Sbjct: 119 APNWVPGDGPACVLGAGGAARAVISSLLDAGVPEILLANRTRVRAERL-RSVFGNRVTVY 177
Query: 433 DLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
D ++ NTTS+GM K E +P L +V D VY P T LL AE
Sbjct: 178 DWSQAGTMVSHAGLVVNTTSLGMIGK-SELRVPLDGLRADTVVTDLVYAPLKTTLLATAE 236
Query: 491 ESGATIVSGLEMFIGQAYEQYERFTG 516
+G V GL M + QA +ER+ G
Sbjct: 237 AAGCVTVDGLGMLLHQAVPGFERWFG 262
>gi|430852566|ref|ZP_19470297.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
gi|430541400|gb|ELA81545.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
Length = 284
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++P+ ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ T LL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|334127717|ref|ZP_08501620.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
gi|333388853|gb|EGK60023.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
Length = 288
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G++G P+GHS SPI+ NEA ++ G + V+ L V D + AGF+
Sbjct: 8 TKLLGVLGAPIGHSLSPIIQNEALRAAGLDYVYAALPVRADALTSAVHGLRDAGIAGFNV 67
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIP K + D++ A+ I AVN ++ + +G+L G+NTD G ++ + RG
Sbjct: 68 TIPFKTEIIPLMDDLSEDARRIHAVNTVV-VEENGRLVGHNTDVTGFLAGFAE--RG--- 121
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
ALAGK V+IGAGGA +A+ +G G + VVI R+ + LA
Sbjct: 122 ------IALAGKKAVLIGAGGAARAVLWGLLRSGVSLVVIGVRSAQKGAALAADFAADGD 175
Query: 430 SLA---DLENFNPEDGM--ILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKIT 483
A D F G I+ TT +GM P V E P+ A+ A+ +D +YTP T
Sbjct: 176 VRAYAFDDPAFTSALGSADIIVQTTPLGMTPHVGEMPPVDVAAIKSSAVFYDLIYTPAET 235
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMN 522
R LR A G ++G M + Q E + +TG+ M
Sbjct: 236 RFLRAAAAHGHETINGETMLVAQGAEAFFLWTGVRPDME 274
>gi|374635112|ref|ZP_09706716.1| 3-dehydroquinate dehydratase, type I [Methanotorris formicicus
Mc-S-70]
gi|373563302|gb|EHP89501.1| 3-dehydroquinate dehydratase, type I [Methanotorris formicicus
Mc-S-70]
Length = 224
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 127/229 (55%), Gaps = 18/229 (7%)
Query: 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLF 82
+IC+PI+ ++ + + KA AD+VE R+D LK + +++I+E + P +
Sbjct: 6 NMICIPIVDNNIGTALKNAKKA-LEVADIVEFRVDMLKEVD-----ESVIEEMAKFPCII 59
Query: 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR-----EFNDSIRGKKPEKC 137
T R WEGG + +ER+ +++ A+E A ++D+EL+ + +F D I K
Sbjct: 60 TVRAYWEGGFWKKSNDERIKLIKKAIECNAKFVDIELREEKNKELVKFRDEIGSK----T 115
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
K+I+S H+++ TPS E+L +V G DI KFA A DV +V + + II
Sbjct: 116 KIIISYHDFEKTPSYEELIKIVEDGLKIG-DITKFAVMARGKEDVLKVLNVINKYEGEII 174
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
G+ MGE G ++RIL FG LTF ++E G SAPGQ +K L +++
Sbjct: 175 GIAMGEEGKLTRILGVHFGSILTFASME-GKASAPGQIDVKKLKEIWEL 222
>gi|302386967|ref|YP_003822789.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
gi|302197595|gb|ADL05166.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
Length = 290
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 155/300 (51%), Gaps = 31/300 (10%)
Query: 247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSND 304
+++ T + G+IG PVGHS SP +YN F+ +G + ++ + V+++ K + +
Sbjct: 3 KRISGKTGLLGLIGSPVGHSGSPAMYNYCFEKLGLDYAYLAFDIQVEEVPKAMEAIRTFH 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
G + T+P K AVK DE+ A+ IGAVN I+ DGKL G+ TD G + + D
Sbjct: 63 MRGCNVTMPCKNEAVKYMDELSPAARIIGAVNTIV--NEDGKLVGHITDGHGFVDNLRDH 120
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRAREL 420
GV +AGK +V G GGA A+ +GAR + I NR ++R +
Sbjct: 121 ---------GVE--IAGKKIIVCGGGGAAAAIQVQCALEGAREISIFNRKDGFFERTLQT 169
Query: 421 AETVGG-------HALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYA 471
AE + + + D+E E G ILAN T +GM+P +E+ I +
Sbjct: 170 AERIRQEKPDCIVNVYDIGDMETMRAEMGSSDILANATILGMKPMDNESVIKDVTMFRPG 229
Query: 472 LVF-DAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF 530
LV DAVY PK T++L+EA+ +G T ++G M + Q E ++ +TGL +M + K F
Sbjct: 230 LVVVDAVYNPKETKMLKEAKAAGCTCINGQGMLVWQGAEAFKLYTGL--EMPVEEVKKLF 287
>gi|405118432|gb|AFR93206.1| arom polypeptide [Cryptococcus neoformans var. grubii H99]
Length = 1611
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 232/528 (43%), Gaps = 75/528 (14%)
Query: 49 GADLVEIRLD-----GLKNFNPR--------ENIKTLIKESPVPTLFTYRPIWEGGQYDG 95
GAD VE R+D G +P + + +L + +P +F+ R +GG
Sbjct: 1112 GADAVEFRIDLLNTTGHAPTSPASPPISFVAKQLASLRLATTLPIVFSVRSKDQGGMVPS 1171
Query: 96 DENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQ----YTP 150
D E L RL + +Y+D+E+ + DSI K E +I S H++ +
Sbjct: 1172 DNAEAYGALVRLGLRCACEYVDLEVCWPEQLLDSIVQLKRE-THIIASWHDWTGDMAWDG 1230
Query: 151 SVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV---PIIGLVMGERGLI 207
+++ A IV A + LD +A +F V S P++ + MG G +
Sbjct: 1231 EEMKAKHVLCEKYGDVAKIVGTAKSGLDNAKLA-IFVGEVQSHPGAKPLLAINMGAAGQL 1289
Query: 208 SRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSK 267
SR+L +T L + +APGQ T +++L P K F + G P+ HS
Sbjct: 1290 SRVLNPILTP-VTHDALPSR--AAPGQLTAREILQARALTGSLP-AKKFVLFGSPIAHSV 1345
Query: 268 SPILYNEAFKSVGFN---GVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324
SP+L+N F ++G G+ VD + S +F G S TIP K + D
Sbjct: 1346 SPLLHNTGFATLGLPHNYGLHESEKVDQ--GVLEMIRSPEFGGASVTIPLKLDIIPHLDS 1403
Query: 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLF 384
V AK IGAVN +I R GKL+G NTD+ A L + +S G S+AL
Sbjct: 1404 VSEDAKIIGAVNTVIPR--GGKLYGENTDWQAIRQAAAQNLDDDV-LSDGSSTAL----- 1455
Query: 385 VVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
VIGAGG +A Y K + + + NRT + A ++ + E++N
Sbjct: 1456 -VIGAGGTCRAAIYAMHKLRFKTIYLFNRTPENAAKVKASFP---------ESYNI---A 1502
Query: 444 ILANTTSIGMQPKVDETPIPKHAL-------GHY----------ALVFDAVYTPKITRLL 486
I+ + +S+ P V + +P ++L G Y + D Y P +T LL
Sbjct: 1503 IVTSLSSLPEAPVVVVSTVPGNSLTLDTFSQGIYLPSEVFSRPKGVAIDLAYKPHMTALL 1562
Query: 487 REAE-ESGATIVSGLEMFIGQAYEQYERFTGLPG---KMNAPHLYKFF 530
+ AE + G + G+E+ Q ++Q+E +TG KM L K+F
Sbjct: 1563 QAAEKKEGWKALPGVEILCLQGFKQFEEWTGKRAPEKKMRKAVLDKYF 1610
>gi|342218958|ref|ZP_08711555.1| putative shikimate dehydrogenase [Megasphaera sp. UPII 135-E]
gi|341588357|gb|EGS31756.1| putative shikimate dehydrogenase [Megasphaera sp. UPII 135-E]
Length = 275
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 22/258 (8%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCTIP 313
FG++G HS SP ++ F +G N + L D+ Q + FAG + TIP
Sbjct: 3 FGLLGNNT-HSLSPQIHQHIFDDLGTNDTYTLLAYATTDMDVLLQQIEAAGFAGINVTIP 61
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
+K + D++ A++IGAVN I+ + GK +GYNTDY DG L G
Sbjct: 62 YKTEVIPFLDQLSPAAQTIGAVNTIVF--AAGKRYGYNTDY--------DGFHLALQAHG 111
Query: 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV--IANRTYDRAREL--AETVGGHAL 429
++GK VV+G GGA +A+ A+GA+ + I+ + + + AE GGH
Sbjct: 112 ---VNISGKTCVVLGTGGASRAIVALLHAQGAKNIRLISRQPLQKKADCLYAEKWGGHIE 168
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
S A+L D IL N T +GM P+++ +P+ +G +V D +Y P+ TRLL++A
Sbjct: 169 SYAELYARPTCD--ILVNATPVGMYPQIEASPLMTLPVGTGDVVIDIIYRPQETRLLQQA 226
Query: 490 EESGATIVSGLEMFIGQA 507
+ G ++G+ M + QA
Sbjct: 227 RQQGKQTINGMYMLVAQA 244
>gi|322707656|gb|EFY99234.1| pentafunctional AROM polypeptide [Metarhizium anisopliae ARSEF 23]
Length = 1570
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 218/516 (42%), Gaps = 82/516 (15%)
Query: 49 GADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDENERVDVL 104
G+D +EIR+D L +++ E + L S +P +FT R + +GG++ D + R D+
Sbjct: 1074 GSDAIEIRVDLLDDWSLEAVTEQLSLLRFVSKLPIIFTVRTVSQGGRFPDAANDHRHDLY 1133
Query: 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164
RLA+ LG +Y+D E+ + E + + + +IVSSH+ + +
Sbjct: 1134 RLALRLGVEYLDAEVTSSDEILQEL--TETRRNTLIVSSHH-----------DPAGSLSW 1180
Query: 165 SGADIVKFATTALDITDVARVF-----------------QITVHSQVPIIGLVMGERGLI 207
A + F AL +V ++ ++ + PII + MG G +
Sbjct: 1181 KNASWIPFYNRALQYGNVIKLVGNAKSIEDNFDLANFKSRMMADHKTPIIAINMGAAGQL 1240
Query: 208 SRILCAKFGGFLT-FGTLENGIVSAPGQPTIKDLLDLYNFRQ----MGP-DTKVFGIIGK 261
SRIL GFLT + +APGQ L RQ +G + F + G
Sbjct: 1241 SRIL----NGFLTPVSHPDLPFKAAPGQ------LSAAEIRQGRALLGQIKKREFYLFGS 1290
Query: 262 PVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKC 321
P+ S+SP L+N F G + + S F G S TIP K +
Sbjct: 1291 PISQSRSPALHNTLFGITGLPHEYHLHETSSAENLDEVLHSESFGGASVTIPLKRDVIAL 1350
Query: 322 CDEVDTVAKSIGAVNCIIRRQSD-----GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVS 376
DE+ A++IGAVN II D +L G NTD+ G + + + GV
Sbjct: 1351 VDELTPAAQAIGAVNTIIPLNDDIPSNKRRLLGDNTDWKGMVYTLSE---------AGVI 1401
Query: 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVI-----ANRTYDRARELAETVGGHALS- 430
+ + + VIG+GG +A Y G + A++ A E +A++
Sbjct: 1402 NPIKNESAAVIGSGGTTRAAIYALHFMGFETIYVVGRDAHKVNTLASEFPRDYNVNAITE 1461
Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDE-------TPIPKHALGHYALV-FDAVYTPKI 482
A +F +I+ ++I +D T + A+ V + Y P
Sbjct: 1462 PAQAADFTHSPSVII---STIPADQPIDNGVEDVVFTLLSLSAVSRVKRVLLEMAYKPHH 1518
Query: 483 TRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
T++++ AE G T++ GLE+ Q + Q+E +TG+
Sbjct: 1519 TQIVQMAESIGTWTVIPGLEVLASQGWYQFEAWTGI 1554
>gi|21227376|ref|NP_633298.1| shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452209858|ref|YP_007489972.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
gi|24211496|sp|Q8PXE6.1|AROE_METMA RecName: Full=Shikimate dehydrogenase
gi|20905736|gb|AAM30970.1| Shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452099760|gb|AGF96700.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
Length = 280
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 143/275 (52%), Gaps = 25/275 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
+VFG+ G PVGHS SP ++N AF ++G + ++ V + + K + F G + T
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 312 IPHKEAAVKCCDEV--DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
+P KE A+K D V D +AK IGAVN ++ + G + GYNTD GA A+ D
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVFGKK-GDIQGYNTDGPGAKQALLD------ 114
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
+ G VV GAGGA +A+A+ A GA + + NRT +RA LA + L
Sbjct: 115 -----TGVEIRGSRMVVAGAGGAARAVAFQLAADGADITVINRTEERAVGLAREISAADL 169
Query: 430 -------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
L+ L+ D +L NTT++GM P D T + L VFD VY P
Sbjct: 170 PGKIRGTGLSGLKELL-RDADVLINTTTLGMHPNTDATIVTAEELHSGLTVFDIVYNPLE 228
Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TRLLREA SGA +SG+ M + Q E + +TG+
Sbjct: 229 TRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGV 263
>gi|440684478|ref|YP_007159273.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
gi|428681597|gb|AFZ60363.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
Length = 288
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 136/267 (50%), Gaps = 26/267 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N A +G + V++ + +++ +++ GFS
Sbjct: 6 TKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFTAIGVVGFSV 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + E+ +A++IGAVN + RQ +G + G NTD G IS ++
Sbjct: 66 TIPHKQAILPFLTEISPIAQAIGAVNT-VTRQGNGWV-GTNTDVEGFISPLQTTY----- 118
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHAL 429
+ + K V++G GGA +A+ G G A + + R + E ++
Sbjct: 119 -----NQDWSQKTAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLTEFWQSWQNSPF 173
Query: 430 S-------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYT 479
+ +L P+ + L NTT +GM P VD++P+ L +V+D +Y
Sbjct: 174 ADKFQVHDWQELPKLIPQANL-LVNTTPVGMYPHVDQSPLSIEEMVDLPSGGIVYDLIYI 232
Query: 480 PKITRLLREAEESGATIVSGLEMFIGQ 506
PK T+ L+ AE+ GA + GLEM + Q
Sbjct: 233 PKPTQFLKLAEKQGAIPIDGLEMLVQQ 259
>gi|384214801|ref|YP_005605965.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354953698|dbj|BAL06377.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 292
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 134/268 (50%), Gaps = 22/268 (8%)
Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKF---FQTYSSNDFAGFSCT 311
G+IG P+ HS SP ++ A +++G G + + + D A + FAG + T
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGVNVT 74
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
P+KEA V DE+ A ++GAVN ++ R DG+L G+NTD G A+ L
Sbjct: 75 YPYKEAVVPLLDELAPGAAAMGAVNTVVAR--DGRLIGHNTDTTGFARAVAPLL------ 126
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALS 430
A +G VIG GG GKA+A+ A K + + I + RA +LA + H +
Sbjct: 127 ------APSGNAVAVIGTGGVGKAIAFALASLKVSGLRIFDSETARAEKLASLLARHGGA 180
Query: 431 LADLENFNPEDGMI-LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
+ DG L N T +GM P P+P L V DAVY+P IT LL A
Sbjct: 181 TVAKSVEDALDGATGLVNGTPVGMLPN-RGMPVPATLLHEKMWVADAVYSPLITPLLAAA 239
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
+ GA I++G E+ I QA + +E FTGL
Sbjct: 240 QAKGARIMTGRELAIYQAADAFELFTGL 267
>gi|430820141|ref|ZP_19438778.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
gi|430439831|gb|ELA50141.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
Length = 284
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+ P HS SP+++N AF++ + V++ V+ ++ + ++ + D G +
Sbjct: 6 TKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDMLGVNL 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
++P+K A + DEV A+ IGAVN I+ + G+L GYNTD G + ++++
Sbjct: 66 SMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA------ 117
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA----NRTYDRARELAETVGG 426
G+S + K ++GAGGA KA+ A GA ++ N+T+ + +E E +
Sbjct: 118 ---GIS--IKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSY 172
Query: 427 HALSLADLENF--------NPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAV 477
+ +F + ++ +L N T IGM K++++ + ++ H L VFD +
Sbjct: 173 RTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSLLLDISMMHENLAVFDLI 232
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
Y P+ TRLL+EA++ GA +GL M I Q +E +T
Sbjct: 233 YAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWT 270
>gi|403172838|ref|XP_003331976.2| hypothetical protein PGTG_13928 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170018|gb|EFP87557.2| hypothetical protein PGTG_13928 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1620
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 235/529 (44%), Gaps = 55/529 (10%)
Query: 36 DKMVVDMGKANASGADLVEIRLDGLK---------NFNPRE----NIKTLIKESPVPTLF 82
DK ++D + G D VE+R+D L + P E + L + + +P ++
Sbjct: 1080 DKNILDRFEELTVGCDAVELRVDLLSTSGKAPTSPSIPPTEFVVKQVAALRRLTTLPIIY 1139
Query: 83 TYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
T R +GG + DG E + + G +Y+D+EL ++ E ++ +K K+I
Sbjct: 1140 TVRTCSQGGMFPDGQPEEWCKLAAMGFRTGCEYVDIELGLSPEQQKALCSQKGHS-KIIA 1198
Query: 142 SSHNYQYTPSVEDLSNLVARIQASGA--DIVKFATTALD-------ITDVARVFQITVHS 192
S H++ D S ++ R A D+VK + A D + + +
Sbjct: 1199 SYHDFSGRLKW-DSSEMIQRYHELKAYGDMVKLVSRAADGLEDNLAMLEFRKKHATLQKD 1257
Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR-QMGP 251
+ +I + MG G +SRIL T L G +APGQ + + + Q+ P
Sbjct: 1258 RQSLITINMGRSGQMSRILSPVLSP--TTHPLLPGPPAAPGQLSFRQIQTAQGLLGQIIP 1315
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL----VDDIAKFFQTYSSNDFAG 307
K F + G P+G S+SP+++ F ++G G V D + + ++DF G
Sbjct: 1316 --KQFWLFGAPIGQSRSPLIHGTGFDTLGLEGYRYQKCETSSVTD-STVLEKIHASDFGG 1372
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII---RRQSDGKLFGYNTDYVGAISAIEDG 364
S TIP K +K D++ A+++GAVN I+ +R KL G NTD+ + IE
Sbjct: 1373 ASVTIPLKVEIIKYLDQLTPDAQAVGAVNTIVPVSQRNGKIKLLGANTDWEAIKTKIEAN 1432
Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET 423
L + + S L VVIGAGG +A Y + G ++ I NRT +A E+A+
Sbjct: 1433 LPAQQALGLITPSQLVRAAGVVIGAGGTARAAVYALHSLGYEQIYIHNRTRSKAEEVAKA 1492
Query: 424 VGGH-ALSLADLENF--NPEDGM---------ILANTTSIGMQPKVDETPIPKHALGHY- 470
+ + + D F + E+G+ + A T + P D IP+
Sbjct: 1493 FPSYFGIRVIDSLGFLCSGEEGVWQPSAIVSAVPAQATRLSDDPPSDRLEIPRGLFDRPG 1552
Query: 471 -ALVFDAVYT-PKITRLLREAEE-SGATIVSGLEMFIGQAYEQYERFTG 516
+V + Y+ K + LLR ++ G V GLE+ + Q Q++ +TG
Sbjct: 1553 GGVVIEMSYSLGKDSPLLRAVQDLVGWKSVDGLELLVEQGARQFQLWTG 1601
>gi|302390016|ref|YP_003825837.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
gi|302200644|gb|ADL08214.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
Length = 288
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 143/279 (51%), Gaps = 26/279 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
DTKV GIIG PV HS SP+++N AF+ + + V+V V +++ + + + + G +
Sbjct: 6 DTKVLGIIGYPVDHSLSPVIHNAAFEELKLSCVYVPFPVKPENLKEAIEGIRALNVGGVN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK + DE+ A IGAVN I+ + G+L G+NTD G + L
Sbjct: 66 VTIPHKVKVMNYLDEISKEAAVIGAVNTIVNK--GGRLVGFNTD--------ASGFKDAL 115
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA---ETVG 425
GV L GK +V+GAGGA +A+ GA ++++NRT RA+EL + G
Sbjct: 116 YRIAGVD--LTGKRVLVLGAGGAARAVVGQCLLSGASSIIVSNRTKTRAKELEFHFKKAG 173
Query: 426 -GHALSLADLENFNPEDGM-----ILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVY 478
G +S+ + P + I+ANT G + + E IP L + FDAVY
Sbjct: 174 MGSKISIIEWGK-QPWRRVASRVDIIANTAGAGQKDDLGLELEIPWDDLDKNTVFFDAVY 232
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
TRLL+EA+ G V G M + Q E ++ +TGL
Sbjct: 233 GSGSTRLLKEAQSRGHLTVPGKYMLLYQGVEAFKLWTGL 271
>gi|398826203|ref|ZP_10584462.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
gi|398221636|gb|EJN08040.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
Length = 292
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 135/274 (49%), Gaps = 22/274 (8%)
Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKF---FQTYSSNDF 305
P + G+IG P+ HS SP ++ A +++G G + + + D A + F
Sbjct: 9 PKKLLTGLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGF 68
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
AG + T P+KEA V DE+ A ++ AVN ++ R DG+L G+NTD G A+ L
Sbjct: 69 AGTNVTFPYKEAVVPLLDELAPTAATMAAVNTVVVR--DGRLIGHNTDTTGFARAVAPLL 126
Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETV 424
A +G VIG GG GKA+A+ A K + + I + RA +LA +
Sbjct: 127 ------------APSGNAVAVIGTGGVGKAIAFALASLKVSDLRIFDSEPARAEKLAALL 174
Query: 425 GGHALSLADLENFNPEDGMI-LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
H + + DG L N T +GM P D TP+ L V DAVY+P IT
Sbjct: 175 APHGGARVARSVEDALDGATGLVNGTPVGMLPNRD-TPVAATLLRENLWVADAVYSPLIT 233
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
LL A GA I++G E+ I QA + +E FTGL
Sbjct: 234 PLLAAARAKGARIMTGRELAIYQAADAFELFTGL 267
>gi|294494923|ref|YP_003541416.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
gi|292665922|gb|ADE35771.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
Length = 268
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 147/269 (54%), Gaps = 26/269 (9%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY----SSNDFAGFS 309
KVFG++G P+ HS SP ++N AF+ + + + V K+ + + F G +
Sbjct: 3 KVFGVLGDPIEHSLSPAMHNAAFRELEMDCEYHAFRVRH--KYLKNAILGAQAMGFGGLN 60
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
T+PHKE A++ + DT+A+ IGAVN + +DG + G+NTD +GA A+ + G +
Sbjct: 61 ITVPHKEKALEFTNP-DTLARRIGAVNTV--SFNDG-IRGHNTDGLGAEMALLEAGVG-I 115
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
N S V++GAGGA +A+A+ KGA V IANRT ++A LAE VG
Sbjct: 116 NASN----------VVLVGAGGAARAIAFHFAEKGAGVTIANRTPEKAEVLAEDVG---C 162
Query: 430 SLADLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
S A LEN +D IL N TS GM P +D T + L VFD VY P T+LL
Sbjct: 163 SHAGLENLKELLQDSDILINATSAGMHPHIDSTIASRDILHPGLAVFDIVYNPLQTKLLH 222
Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
+AE +GA + G+ M + Q E + +TG
Sbjct: 223 QAELAGAKPIGGVAMLVHQGAEAFRIWTG 251
>gi|406944124|gb|EKD75970.1| hypothetical protein ACD_43C00266G0001, partial [uncultured
bacterium]
Length = 299
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 168/348 (48%), Gaps = 56/348 (16%)
Query: 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGI 228
I K ATT + D+ + Q+ II + MGE G+++R+ +LTF +
Sbjct: 5 IPKIATTINTVADLNIIAQLQQKYGKKIIAIGMGELGMMTRLYNK---SWLTFAAISTAS 61
Query: 229 VSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL 288
+APGQ T+ Q+ +T+++G+IG + HS SP L+N+ FK +
Sbjct: 62 QTAPGQLTVT---------QLRSNTQLYGLIGDDIAHSLSPSLHNDWFKKQHLPHRYQLW 112
Query: 289 LVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF 348
+++ +F + ++ G S T P K+ + C+++D AK+IGAVN ++RR KL+
Sbjct: 113 QANNLPEFMEVFNFFQLPGASVTKPFKKEVISYCNKLDRHAKAIGAVNTLVRR--GKKLY 170
Query: 349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV 408
GYNTD+ G SA+ L +++G+GGA +A+AY AK A +
Sbjct: 171 GYNTDWFGVQSAL--------------GQTLHDARILILGSGGAAQAVAYAAKQAHANTI 216
Query: 409 IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 468
TV HA NF+ ++ N T P+ ++ +P+ AL
Sbjct: 217 --------------TVLAHAELPTKQTNFD-----VVVNAT-----PERNKLLLPEVALK 252
Query: 469 HYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFIGQAYEQYERFT 515
+ +V D +Y P T+LLR A + A ++ GL M QA EQ+ +T
Sbjct: 253 N-KIVMDCIYKP--TKLLRAARQYQAKRVIDGLPMLRDQAKEQFRLWT 297
>gi|428775357|ref|YP_007167144.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
gi|428689636|gb|AFZ42930.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
Length = 283
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 143/280 (51%), Gaps = 28/280 (10%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
TK+ G+IG PV HS SP+++N +G + V++ L V D+ + +++ D GF+
Sbjct: 6 TKLLGVIGDPVEHSLSPVMHNAVLNHLGLDYVYLPLPVKKGDLERALAGFTAIDLVGFNA 65
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
TIPHK+A + + + A+ +GAVN + R ++ + G NTD G I+ ++ + N
Sbjct: 66 TIPHKQAIIPYLNRITPEAQQVGAVNTVWRTEAGWE--GTNTDVDGFIAPLKSLDQDWSN 123
Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
++ V++G GGA +A+ G AK + + + R ++ + + +
Sbjct: 124 ITP-----------VILGNGGAARAVIVGCAKLGCSEIAVVGRNQEKLEQFKSSWANTGV 172
Query: 430 SLADLENFNPED-------GMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYT 479
S A ++ + E+ +L NTT IGM P D +P+ + L + A+ +D +YT
Sbjct: 173 SAA-IKTYLWEELPHLVSQTQLLVNTTPIGMSPDADASPVEREILKELPNCAIAYDLIYT 231
Query: 480 PKITRLLREAEESG-ATIVSGLEMFIGQAYEQYERFTGLP 518
P+ TRLL+ A+++ A GLEM I Q E + P
Sbjct: 232 PRPTRLLQLAQDNANAVTFDGLEMLIQQGAAALEIWLQQP 271
>gi|319411943|emb|CBQ73986.1| probable ARO1-Pentafunctional AROM polypeptide [Sporisorium reilianum
SRZ2]
Length = 1715
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 239/549 (43%), Gaps = 100/549 (18%)
Query: 40 VDMGKANASGADLVEIRLDGLK---------NFNPRENIKT----LIKESPVPTLFTYRP 86
+++ ++ +GAD +E R D L P E +K L + +P +FT R
Sbjct: 1176 LELIRSMETGADALEFRADLLNPSGQPVTAPQVPPTEYVKNQLAALRHRTSLPIVFTVRT 1235
Query: 87 IWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHN 145
+GG + DG + E D++ +A+ G +YID+EL ++D++ V+ + N
Sbjct: 1236 HSQGGMFPDGAQQEYFDLISMALRHGCEYIDLELG----WDDALLAA------VVEAKGN 1285
Query: 146 YQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF-----------------QI 188
Q S D S R+ K T A D+A++ ++
Sbjct: 1286 SQIIASWHDWS---GRLDWESEATAKIYTKACRFGDIAKIIGKANTMEDNYSLERFRAKV 1342
Query: 189 TVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ 248
+ + P++ + MG G SRI+ F +T + + +APGQ + + + +
Sbjct: 1343 SATATKPLLAVNMGAVGQYSRIVNPVFTP-ITHELMP--VKAAPGQLSFRQVQTALSLIG 1399
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNG---VFVHLLVDDIAKFFQTYSSNDF 305
+ + F +IG P+ HS SP+L+N F ++G +F VD+ F S DF
Sbjct: 1400 QA-EPRRFALIGSPISHSLSPLLHNTGFATLGLPHNYELFETAEVDEAVAAF--VRSPDF 1456
Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIR-RQSDGK---LFGYNTDYVGAISAI 361
G S TIPHK ++ D+V AK+IGAVN +I R ++GK L G NTD++ AI
Sbjct: 1457 GGASVTIPHKLNIIRLLDQVTDEAKAIGAVNTVIPVRNAEGKVTALVGDNTDWI----AI 1512
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAREL 420
E R L V A +VIGAGG+ +A + G R+++ NRT A +L
Sbjct: 1513 ETLARRSLKT---VHLADPNLTALVIGAGGSARAALFALYRLGVKRILLFNRTLANAEKL 1569
Query: 421 AETV----GGHALSLADLENFNPED---GMILANTTSIGMQPKVDETP-----IPKHALG 468
A+ V H L+ D P D ++++N + G +D +P L
Sbjct: 1570 AKEVPVEWNVHVLASLDEIAQLPLDHSPSVVVSNIPAEGA--TLDAAAAGLIHLPAVILQ 1627
Query: 469 HYA--LVFDAVYTPKITRLLREAEESGATI-------------------VSGLEMFIGQA 507
+ A +V D Y P T LL+ ++ T G+ + + Q
Sbjct: 1628 NPAGGVVIDMSYKPYHTSLLQLVQQVNTTTELAIGTNVTKAPLRKLWTACPGITILLEQG 1687
Query: 508 YEQYERFTG 516
Q++R+TG
Sbjct: 1688 CHQFQRWTG 1696
>gi|407473822|ref|YP_006788222.1| shikimate 5-dehydrogenase [Clostridium acidurici 9a]
gi|407050330|gb|AFS78375.1| shikimate 5-dehydrogenase AroE [Clostridium acidurici 9a]
Length = 282
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
+T ++ +IG P+ S SP ++N +FK G N ++ L V +D+ + + G +
Sbjct: 6 NTNLYCLIGHPISKSLSPEIHNYSFKKNGINAKYIALDVSTEDLEDAVKGIKALGIRGCN 65
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIPHK +K DE+D A+ +GAVN + + +GKL GYNTD G + ++D
Sbjct: 66 VTIPHKIDIIKYLDEIDEEAELLGAVNTV--KNENGKLIGYNTDGRGFVQVLKDK----- 118
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAR----ELAET- 423
+ + K V+GAGGA +A++ +G ++ I NRT ++A+ E+ E
Sbjct: 119 ------NIEIKNKNIAVLGAGGAARAISIILAKEGINQITIFNRTIEKAKIIIDEIKEKF 172
Query: 424 --VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
V G SL ++ IL N TSIGM P +DE P+ ++ D VY P
Sbjct: 173 PDVTGMYSSLES-NKYDLSSVDILINCTSIGMYPNIDEMPVDPSIFPRQTVICDIVYKPL 231
Query: 482 ITRLLREAEESGATIVSGLEMFIGQ 506
T+LL +E++G + GL+M I Q
Sbjct: 232 KTKLLEMSEKNGNIAIGGLDMLIYQ 256
>gi|424919306|ref|ZP_18342670.1| shikimate 5-dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392855482|gb|EJB08003.1| shikimate 5-dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 281
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 132/268 (49%), Gaps = 31/268 (11%)
Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
++G P+ HS+SP+L+ K G G + L + D+ FF +S + G + T+PHK
Sbjct: 8 VMGHPISHSRSPMLHGYWLKRYGIEGSYERLDIPPQDVDTFFSRFSEAGWIGGNITVPHK 67
Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
A + D +D A +GAVN I DG L G NTD +G + I++ G
Sbjct: 68 TAVIPHLDHIDDAATKMGAVNTI--WWEDGVLVGGNTDAIGFLGNIDELAPGW------- 118
Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHALS- 430
+ K V++GAGGA +A YG ++G V + NRT +A LA G H +S
Sbjct: 119 --DMGAKRAVILGAGGATRAATYGLLSRGLTVALCNRTVSQAEVLASHFGAGVSAHGMSE 176
Query: 431 LADLENFNPEDGMILANTTSIGM--QP--KVDETPIPKHALGHYALVFDAVYTPKITRLL 486
L DL +L N TS+GM QP +D +P+ K A+V+D +Y P T L+
Sbjct: 177 LPDLLATCD----LLVNATSLGMIGQPPLDIDLSPLKKD-----AIVYDVIYVPLETELI 227
Query: 487 REAEESGATIVSGLEMFIGQAYEQYERF 514
+ A+ G V GL M + Q + R+
Sbjct: 228 KAAKARGHRSVDGLGMLLHQGVVGFNRW 255
>gi|407772677|ref|ZP_11119979.1| shikimate 5-dehydrogenase [Thalassospira profundimaris WP0211]
gi|407284630|gb|EKF10146.1| shikimate 5-dehydrogenase [Thalassospira profundimaris WP0211]
Length = 288
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 26/282 (9%)
Query: 246 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ----TYS 301
+R + +++ G++G PV HSKSP L+ G +G ++ L V+ + FQ +
Sbjct: 7 YRTLSGTSRLAGVMGWPVSHSKSPRLHGYWLAKYGIDGCYMPLPVE--PENFQAALISLR 64
Query: 302 SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI 361
+ F+G + TIP KE A+ CDE+ A+ IGAVN + + DG+L G NTD G + +
Sbjct: 65 NLGFSGVNVTIPQKEMAMPECDELSDRARRIGAVNTVTFAK-DGRLLGDNTDGFGFLENL 123
Query: 362 EDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAREL 420
A A VV+GAGGA +A+ +G + +ANRT RA ++
Sbjct: 124 R---------QEAPDIAFASGPAVVLGAGGACRAVLVALLDEGCPEIRLANRTRKRAEDV 174
Query: 421 AETVGGHALSLADLENFNPE--DGM-ILANTTSIGM--QPKVDETPIPKHALGHYALVFD 475
A + + + D P+ DG ++ NTTS+GM QPK++ I L ALV D
Sbjct: 175 AAEIKDPRIKVIDWP-VAPDALDGASLVVNTTSLGMVGQPKLE---IDLSGLPQTALVTD 230
Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
VY P +T LL +A+ G IV GL M + QA + R+ G+
Sbjct: 231 IVYAPLMTDLLVQAKARGNPIVDGLGMLLHQARPGFHRWFGI 272
>gi|427387021|ref|ZP_18883077.1| shikimate 5-dehydrogenase [Bacteroides oleiciplenus YIT 12058]
gi|425725924|gb|EKU88792.1| shikimate 5-dehydrogenase [Bacteroides oleiciplenus YIT 12058]
Length = 248
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 26/262 (9%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN-DFAGFSCTIPH 314
+G+IG P+ HS S +NE FKS + +V+ + I F + N + G + TIP+
Sbjct: 4 YGLIGYPLKHSFSIGYFNEKFKSENIDAEYVNFEIPSINDFMEIIGENSNLCGLNVTIPY 63
Query: 315 KEAAVKCCDEVDTVAKSIGAVNCI-IRRQSDGK--LFGYNTDYVGAISAIEDGLRGRLNV 371
KE + DE+D IGAVN I I RQ GK L GYN+D +G +IE L+
Sbjct: 64 KEQVIPYLDELDKDTAKIGAVNVIKIIRQPKGKVKLVGYNSDIIGFTQSIEPLLQPH--- 120
Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
K +++G GGA KA+ +G G V +RT G L+
Sbjct: 121 ---------HKKALILGTGGASKAVFHGLANLGIEGVFVSRTKK---------GSEYLTY 162
Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAE 490
+L ++ ++ N T +GM PKVD P IP L L++D +Y P T +++ E
Sbjct: 163 EELTPEVMQEYTVIVNCTPVGMYPKVDFCPNIPYELLTPNHLLYDLLYNPNETLFMKKGE 222
Query: 491 ESGATIVSGLEMFIGQAYEQYE 512
GA +GLEM + QA+ +E
Sbjct: 223 ARGAVTKNGLEMLLLQAFAAWE 244
>gi|375147920|ref|YP_005010361.1| shikimate dehydrogenase [Niastella koreensis GR20-10]
gi|361061966|gb|AEW00958.1| shikimate dehydrogenase [Niastella koreensis GR20-10]
Length = 244
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 128/268 (47%), Gaps = 30/268 (11%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGV----FVHLLVDDIAKFFQTYSSNDFAGFS 309
K +G+IG P+ HS S + E F+ G G F +D+ A Q D G +
Sbjct: 2 KRYGLIGFPLSHSFSQKYFTEKFQREGITGCVYDNFPLASIDEFAALIQ--QQTDLHGLN 59
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
TIP+KE + V K+IGA NCI R +G+L GYNTD VG E+ LR L
Sbjct: 60 VTIPYKEKVIPFLHAQSDVVKTIGACNCI--RIENGELTGYNTDVVG----FEESLRPLL 113
Query: 370 NVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
K +V+G GGA KA+ Y G +RT AR+L
Sbjct: 114 QPHH--------KKALVLGTGGAAKAVHYVLNKLGIEFYEVSRTPGTARQL--------- 156
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLRE 488
S + + ++ ++ NT+ +GM PKV+E P +P AL +FD VY P T L++
Sbjct: 157 SYQQVTDAVIKEHEVIINTSPLGMYPKVEECPPLPYQALTPKHYLFDLVYNPAKTLFLQK 216
Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTG 516
EE GA I +G +M I QA E + + G
Sbjct: 217 GEEQGAAIKNGHDMLIIQAEESWRIWNG 244
>gi|159905662|ref|YP_001549324.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C6]
gi|229488295|sp|A9A9R9.1|AROD_METM6 RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase;
AltName: Full=Type I DHQase
gi|159887155|gb|ABX02092.1| 3-dehydroquinate dehydratase, type I [Methanococcus maripaludis C6]
Length = 218
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTY 84
+IC+P++ E+V + +A G D+VE R+D L + + + K S +P++ T
Sbjct: 1 MICIPVIDENVSDAINSAKEALKYG-DIVEFRVDLLNDVT----FEDIEKFSKIPSILTI 55
Query: 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSS 143
R WEGG + +NER+++L+ A++ A +ID+EL+ R R + K K+IVS
Sbjct: 56 RAEWEGGAWKKSDNERIELLKYAIKNNAKFIDIELKEERNLELVKYRNEIGSKTKIIVSY 115
Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
H+++ TP +++L ++V + G DI KFAT A D ++ + II + MGE
Sbjct: 116 HDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKILNLMNKYSGKIIAIGMGE 174
Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
G ++RIL FG LTF ++E G SAPGQ +K L ++
Sbjct: 175 SGKLTRILGLDFGSILTFASME-GKASAPGQVDVKKLKEILEL 216
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,747,946,926
Number of Sequences: 23463169
Number of extensions: 428320224
Number of successful extensions: 1313843
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3198
Number of HSP's successfully gapped in prelim test: 5727
Number of HSP's that attempted gapping in prelim test: 1289137
Number of HSP's gapped (non-prelim): 9356
length of query: 616
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 467
effective length of database: 8,863,183,186
effective search space: 4139106547862
effective search space used: 4139106547862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)