Query 007156
Match_columns 615
No_of_seqs 258 out of 1405
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 18:36:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007156.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007156hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 1E-188 3E-193 1525.4 42.1 512 102-615 1-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 8E-188 3E-192 1522.0 43.4 513 102-615 3-546 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 4E-188 2E-192 1528.0 41.3 516 98-615 33-578 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-107 1E-111 872.7 27.0 370 180-606 55-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 1E-100 4E-105 812.7 16.6 356 173-586 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 7.6E-96 3E-100 774.3 21.7 349 173-583 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.8E-78 6.3E-83 651.5 23.4 380 173-611 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.5 9.2E-07 3.1E-11 95.6 12.6 118 332-483 200-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.3 1.5E-06 5.1E-11 94.0 9.2 120 332-485 191-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.1 8.9E-06 3E-10 86.4 9.9 213 218-473 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.5 0.00054 1.8E-08 74.6 12.4 119 332-484 227-346 (464)
12 1l7d_A Nicotinamide nucleotide 97.2 0.0044 1.5E-07 65.0 14.0 211 219-472 20-296 (384)
13 4dio_A NAD(P) transhydrogenase 97.1 0.00065 2.2E-08 72.9 7.2 110 352-479 187-322 (405)
14 3ond_A Adenosylhomocysteinase; 96.9 0.0021 7E-08 70.6 9.3 122 332-486 245-366 (488)
15 3k92_A NAD-GDH, NAD-specific g 96.8 0.0088 3E-07 64.6 12.9 122 333-473 199-329 (424)
16 3p2y_A Alanine dehydrogenase/p 96.7 0.0022 7.4E-08 68.4 6.8 100 353-473 182-305 (381)
17 4fcc_A Glutamate dehydrogenase 96.5 0.065 2.2E-06 58.3 17.0 155 304-473 140-354 (450)
18 3aoe_E Glutamate dehydrogenase 96.4 0.012 4.1E-07 63.4 10.8 120 334-473 197-323 (419)
19 1a4i_A Methylenetetrahydrofola 96.0 0.015 5E-07 60.4 8.5 93 336-472 146-239 (301)
20 3jyo_A Quinate/shikimate dehyd 95.9 0.018 6.1E-07 58.5 8.5 88 339-446 111-205 (283)
21 3aog_A Glutamate dehydrogenase 95.8 0.05 1.7E-06 59.0 11.9 123 334-473 214-344 (440)
22 3l07_A Bifunctional protein fo 95.8 0.023 7.7E-07 58.5 8.8 83 335-455 141-224 (285)
23 3d4o_A Dipicolinate synthase s 95.8 0.035 1.2E-06 55.8 9.7 119 336-483 136-255 (293)
24 1gpj_A Glutamyl-tRNA reductase 95.8 0.16 5.4E-06 53.6 15.1 121 332-473 145-269 (404)
25 3r3j_A Glutamate dehydrogenase 95.7 0.16 5.6E-06 55.3 15.4 134 333-485 217-368 (456)
26 2bma_A Glutamate dehydrogenase 95.7 0.086 2.9E-06 57.7 13.2 122 334-473 231-372 (470)
27 3p2o_A Bifunctional protein fo 95.5 0.035 1.2E-06 57.1 8.9 91 335-469 140-231 (285)
28 3tri_A Pyrroline-5-carboxylate 95.5 0.067 2.3E-06 53.5 10.7 98 355-474 3-102 (280)
29 1b0a_A Protein (fold bifunctio 95.4 0.031 1.1E-06 57.6 8.0 94 334-471 138-232 (288)
30 3ngx_A Bifunctional protein fo 95.4 0.036 1.2E-06 56.8 8.4 81 334-454 131-212 (276)
31 4a5o_A Bifunctional protein fo 95.3 0.046 1.6E-06 56.3 8.7 83 335-455 141-224 (286)
32 1c1d_A L-phenylalanine dehydro 95.2 0.11 3.8E-06 54.8 11.6 112 334-474 153-266 (355)
33 1edz_A 5,10-methylenetetrahydr 95.2 0.029 1E-06 58.4 7.2 101 349-473 171-278 (320)
34 4a26_A Putative C-1-tetrahydro 95.1 0.05 1.7E-06 56.4 8.2 92 335-470 145-239 (300)
35 1v9l_A Glutamate dehydrogenase 95.0 0.067 2.3E-06 57.7 9.5 122 334-473 189-325 (421)
36 3tnl_A Shikimate dehydrogenase 95.0 0.041 1.4E-06 56.9 7.5 91 339-446 138-237 (315)
37 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.018 6.2E-07 51.3 4.1 88 333-446 4-91 (144)
38 3don_A Shikimate dehydrogenase 95.0 0.025 8.6E-07 57.4 5.6 85 340-446 102-186 (277)
39 3t4e_A Quinate/shikimate dehyd 95.0 0.044 1.5E-06 56.6 7.5 90 340-446 133-231 (312)
40 2egg_A AROE, shikimate 5-dehyd 94.6 0.038 1.3E-06 56.1 6.0 87 340-446 125-215 (297)
41 3u62_A Shikimate dehydrogenase 94.4 0.085 2.9E-06 52.7 7.8 99 341-470 97-200 (253)
42 2c2x_A Methylenetetrahydrofola 94.3 0.094 3.2E-06 53.9 8.1 97 334-472 137-234 (281)
43 4e12_A Diketoreductase; oxidor 94.3 0.099 3.4E-06 52.0 8.2 97 356-475 5-124 (283)
44 2yfq_A Padgh, NAD-GDH, NAD-spe 94.2 0.22 7.6E-06 53.7 11.0 122 334-473 191-326 (421)
45 1v8b_A Adenosylhomocysteinase; 94.1 0.28 9.6E-06 53.7 11.8 109 347-485 249-357 (479)
46 1bgv_A Glutamate dehydrogenase 94.1 0.57 1.9E-05 51.0 13.9 123 334-473 209-350 (449)
47 2tmg_A Protein (glutamate dehy 94.0 0.45 1.5E-05 51.2 13.0 124 334-473 188-319 (415)
48 2rir_A Dipicolinate synthase, 94.0 0.12 4E-06 52.0 7.9 110 346-483 148-257 (300)
49 1leh_A Leucine dehydrogenase; 93.5 0.12 4.3E-06 54.4 7.4 112 334-473 150-264 (364)
50 1pjc_A Protein (L-alanine dehy 93.3 0.17 5.9E-06 52.4 8.0 96 353-472 165-269 (361)
51 3u95_A Glycoside hydrolase, fa 93.2 0.18 6E-06 54.9 8.1 128 357-497 2-183 (477)
52 2dpo_A L-gulonate 3-dehydrogen 93.1 0.27 9.4E-06 50.5 9.0 123 355-503 6-151 (319)
53 1pzg_A LDH, lactate dehydrogen 93.0 0.2 7E-06 51.6 8.0 106 356-475 10-137 (331)
54 1mld_A Malate dehydrogenase; o 93.0 0.33 1.1E-05 49.7 9.5 101 357-473 2-120 (314)
55 1nvt_A Shikimate 5'-dehydrogen 93.0 0.076 2.6E-06 53.2 4.6 116 264-399 32-159 (287)
56 3d64_A Adenosylhomocysteinase; 92.9 0.32 1.1E-05 53.4 9.7 100 346-473 268-367 (494)
57 3fbt_A Chorismate mutase and s 92.9 0.16 5.3E-06 51.8 6.8 104 340-473 107-218 (282)
58 2hk9_A Shikimate dehydrogenase 92.8 0.2 6.7E-06 49.9 7.3 84 340-446 114-197 (275)
59 3o8q_A Shikimate 5-dehydrogena 92.8 0.16 5.6E-06 51.4 6.7 118 264-399 29-159 (281)
60 1hyh_A L-hicdh, L-2-hydroxyiso 92.7 0.14 4.8E-06 51.7 6.1 102 356-474 2-126 (309)
61 3dtt_A NADP oxidoreductase; st 92.6 0.16 5.6E-06 49.4 6.2 109 349-473 13-127 (245)
62 3pwz_A Shikimate dehydrogenase 92.4 0.18 6E-06 50.9 6.4 119 265-399 24-153 (272)
63 3mw9_A GDH 1, glutamate dehydr 92.4 0.34 1.2E-05 53.4 9.0 113 345-473 232-352 (501)
64 1gtm_A Glutamate dehydrogenase 92.3 0.53 1.8E-05 50.5 10.2 59 334-403 190-250 (419)
65 3tum_A Shikimate dehydrogenase 92.0 0.27 9.1E-06 49.7 7.1 48 340-398 110-157 (269)
66 1b8p_A Protein (malate dehydro 91.8 0.17 5.8E-06 51.9 5.4 111 356-473 6-136 (329)
67 2v6b_A L-LDH, L-lactate dehydr 91.6 0.075 2.6E-06 54.0 2.5 123 357-496 2-139 (304)
68 2d5c_A AROE, shikimate 5-dehyd 91.5 0.26 8.8E-06 48.4 6.3 81 340-446 102-182 (263)
69 2i6t_A Ubiquitin-conjugating e 91.0 0.42 1.4E-05 48.9 7.4 101 356-474 15-129 (303)
70 3ce6_A Adenosylhomocysteinase; 90.9 1.3 4.4E-05 48.6 11.6 108 347-485 266-374 (494)
71 2ewd_A Lactate dehydrogenase,; 90.9 0.21 7.3E-06 50.6 5.1 100 356-474 5-125 (317)
72 1nyt_A Shikimate 5-dehydrogena 90.9 0.41 1.4E-05 47.5 7.0 49 339-399 103-151 (271)
73 1zud_1 Adenylyltransferase THI 90.8 0.32 1.1E-05 48.1 6.2 37 352-399 25-61 (251)
74 2eez_A Alanine dehydrogenase; 90.8 0.26 9E-06 51.2 5.8 97 352-472 163-268 (369)
75 3fef_A Putative glucosidase LP 90.8 0.41 1.4E-05 51.9 7.5 106 353-473 3-149 (450)
76 3oet_A Erythronate-4-phosphate 90.7 1.2 4.1E-05 47.4 10.8 108 332-471 96-211 (381)
77 2o4c_A Erythronate-4-phosphate 90.6 1.3 4.5E-05 46.9 11.0 179 332-554 93-281 (380)
78 3rui_A Ubiquitin-like modifier 90.6 0.24 8.2E-06 52.0 5.3 37 352-399 31-67 (340)
79 1p77_A Shikimate 5-dehydrogena 90.4 0.33 1.1E-05 48.3 5.8 49 339-399 103-151 (272)
80 2g1u_A Hypothetical protein TM 90.3 0.57 1.9E-05 42.0 6.8 37 351-399 15-51 (155)
81 2zqz_A L-LDH, L-lactate dehydr 90.3 0.25 8.6E-06 51.0 5.0 106 355-473 9-128 (326)
82 1o6z_A MDH, malate dehydrogena 90.2 0.2 6.9E-06 50.8 4.3 103 357-473 2-122 (303)
83 1ldn_A L-lactate dehydrogenase 90.2 0.14 4.9E-06 52.2 3.2 105 356-473 7-126 (316)
84 1x7d_A Ornithine cyclodeaminas 90.1 0.54 1.8E-05 49.0 7.4 114 340-481 116-238 (350)
85 1obb_A Maltase, alpha-glucosid 90.0 0.31 1E-05 53.3 5.7 124 355-496 3-174 (480)
86 3h5n_A MCCB protein; ubiquitin 90.0 0.81 2.8E-05 47.7 8.6 38 351-399 114-151 (353)
87 2hjr_A Malate dehydrogenase; m 89.9 0.25 8.6E-06 50.8 4.7 128 356-500 15-160 (328)
88 1t2d_A LDH-P, L-lactate dehydr 89.9 0.32 1.1E-05 50.0 5.4 125 356-497 5-152 (322)
89 1ez4_A Lactate dehydrogenase; 89.8 0.31 1.1E-05 50.1 5.2 105 356-473 6-124 (318)
90 2hmt_A YUAA protein; RCK, KTN, 89.5 0.41 1.4E-05 41.0 5.1 102 353-473 4-108 (144)
91 3d0o_A L-LDH 1, L-lactate dehy 89.3 0.49 1.7E-05 48.4 6.3 107 354-473 5-126 (317)
92 2ekl_A D-3-phosphoglycerate de 89.3 2.6 8.7E-05 43.1 11.6 94 349-471 136-233 (313)
93 1y6j_A L-lactate dehydrogenase 89.3 0.42 1.4E-05 48.9 5.8 104 356-473 8-126 (318)
94 1a5z_A L-lactate dehydrogenase 89.2 0.5 1.7E-05 48.1 6.3 105 357-475 2-121 (319)
95 2rcy_A Pyrroline carboxylate r 89.2 1.9 6.4E-05 41.5 10.0 92 355-474 4-95 (262)
96 2i99_A MU-crystallin homolog; 89.0 1.3 4.3E-05 45.0 9.0 103 352-480 132-237 (312)
97 2vhw_A Alanine dehydrogenase; 88.6 0.51 1.8E-05 49.3 5.9 95 352-470 165-268 (377)
98 1s6y_A 6-phospho-beta-glucosid 88.6 0.34 1.2E-05 52.4 4.7 127 356-496 8-175 (450)
99 1smk_A Malate dehydrogenase, g 88.5 0.33 1.1E-05 49.8 4.3 104 356-473 9-128 (326)
100 3vku_A L-LDH, L-lactate dehydr 88.4 0.47 1.6E-05 49.2 5.5 106 355-473 9-128 (326)
101 3kkj_A Amine oxidase, flavin-c 88.3 0.44 1.5E-05 42.2 4.4 31 357-399 4-34 (336)
102 1lld_A L-lactate dehydrogenase 88.1 0.38 1.3E-05 48.1 4.4 104 355-474 7-128 (319)
103 3h8v_A Ubiquitin-like modifier 87.9 0.5 1.7E-05 48.4 5.2 38 351-399 32-69 (292)
104 3d1l_A Putative NADP oxidoredu 87.8 0.38 1.3E-05 46.7 4.1 99 351-473 6-105 (266)
105 4g2n_A D-isomer specific 2-hyd 87.7 3.4 0.00012 43.2 11.4 164 350-552 168-336 (345)
106 1omo_A Alanine dehydrogenase; 87.7 1.9 6.7E-05 44.0 9.5 111 341-481 113-229 (322)
107 1up7_A 6-phospho-beta-glucosid 87.5 0.89 3.1E-05 48.6 7.1 124 356-496 3-164 (417)
108 4gsl_A Ubiquitin-like modifier 87.4 0.53 1.8E-05 53.1 5.5 37 352-399 323-359 (615)
109 3ba1_A HPPR, hydroxyphenylpyru 87.4 3.2 0.00011 43.0 10.9 91 350-472 159-253 (333)
110 1wwk_A Phosphoglycerate dehydr 87.2 3.2 0.00011 42.2 10.7 93 350-471 137-233 (307)
111 1oju_A MDH, malate dehydrogena 87.2 0.47 1.6E-05 48.4 4.5 104 357-473 2-121 (294)
112 4huj_A Uncharacterized protein 87.1 0.63 2.1E-05 44.5 5.1 93 356-474 24-117 (220)
113 2xxj_A L-LDH, L-lactate dehydr 87.0 0.32 1.1E-05 49.8 3.1 104 356-473 1-119 (310)
114 1guz_A Malate dehydrogenase; o 86.8 0.71 2.4E-05 46.8 5.6 104 357-473 2-121 (310)
115 4e21_A 6-phosphogluconate dehy 86.8 1.1 3.8E-05 46.7 7.2 95 353-472 20-117 (358)
116 2zyd_A 6-phosphogluconate dehy 86.8 0.82 2.8E-05 49.5 6.4 102 352-473 12-116 (480)
117 1txg_A Glycerol-3-phosphate de 86.7 1.3 4.4E-05 44.1 7.3 94 357-473 2-107 (335)
118 2ph5_A Homospermidine synthase 86.6 3.2 0.00011 45.6 10.9 100 354-471 12-115 (480)
119 3gt0_A Pyrroline-5-carboxylate 86.6 1.5 5.2E-05 42.3 7.5 98 356-474 3-101 (247)
120 2gcg_A Glyoxylate reductase/hy 86.6 3.3 0.00011 42.4 10.5 94 350-471 150-247 (330)
121 3vh1_A Ubiquitin-like modifier 86.5 0.63 2.2E-05 52.3 5.4 38 351-399 323-360 (598)
122 3gvi_A Malate dehydrogenase; N 86.4 0.99 3.4E-05 46.7 6.5 106 353-473 5-127 (324)
123 2dbq_A Glyoxylate reductase; D 86.3 5.5 0.00019 40.8 12.0 93 350-471 145-241 (334)
124 3jtm_A Formate dehydrogenase, 86.2 3.3 0.00011 43.3 10.4 147 350-527 159-310 (351)
125 1z82_A Glycerol-3-phosphate de 86.0 0.46 1.6E-05 48.1 3.7 98 355-475 14-116 (335)
126 3hdj_A Probable ornithine cycl 86.0 4.2 0.00014 41.6 10.8 101 354-483 120-227 (313)
127 3lk7_A UDP-N-acetylmuramoylala 85.9 1.5 5.3E-05 46.5 7.8 121 352-510 6-126 (451)
128 1u8x_X Maltose-6'-phosphate gl 85.8 0.41 1.4E-05 52.1 3.4 126 355-496 28-194 (472)
129 3i83_A 2-dehydropantoate 2-red 85.8 0.92 3.2E-05 45.7 5.8 102 356-474 3-109 (320)
130 1npy_A Hypothetical shikimate 85.7 1.1 3.8E-05 45.0 6.3 47 341-399 106-152 (271)
131 1ur5_A Malate dehydrogenase; o 85.7 1.2 4E-05 45.4 6.4 104 356-473 3-122 (309)
132 3p7m_A Malate dehydrogenase; p 85.5 0.58 2E-05 48.3 4.2 106 354-473 4-125 (321)
133 4ina_A Saccharopine dehydrogen 85.5 1.2 4.1E-05 46.9 6.7 96 356-471 2-108 (405)
134 4hy3_A Phosphoglycerate oxidor 85.4 2.7 9.4E-05 44.2 9.3 161 350-552 171-339 (365)
135 1ks9_A KPA reductase;, 2-dehyd 85.3 1.6 5.6E-05 42.1 7.1 95 357-473 2-100 (291)
136 3nep_X Malate dehydrogenase; h 85.2 0.52 1.8E-05 48.6 3.7 104 357-473 2-121 (314)
137 1hdo_A Biliverdin IX beta redu 85.0 3.1 0.0001 37.5 8.3 98 355-470 3-111 (206)
138 1jw9_B Molybdopterin biosynthe 84.7 0.67 2.3E-05 45.7 4.0 37 352-399 28-64 (249)
139 1y7t_A Malate dehydrogenase; N 84.6 0.79 2.7E-05 46.4 4.7 110 356-473 5-133 (327)
140 3k5p_A D-3-phosphoglycerate de 84.6 6 0.0002 42.5 11.6 164 350-552 151-322 (416)
141 2d4a_B Malate dehydrogenase; a 84.6 0.92 3.1E-05 46.3 5.1 99 357-473 1-119 (308)
142 2cuk_A Glycerate dehydrogenase 84.6 6.4 0.00022 40.1 11.4 88 350-471 139-230 (311)
143 2izz_A Pyrroline-5-carboxylate 84.4 2.4 8.3E-05 42.8 8.1 101 354-474 21-122 (322)
144 2p4q_A 6-phosphogluconate dehy 84.3 1.8 6.3E-05 47.1 7.7 98 356-473 11-112 (497)
145 3hg7_A D-isomer specific 2-hyd 84.3 2.1 7.2E-05 44.3 7.7 162 349-554 134-304 (324)
146 2d0i_A Dehydrogenase; structur 84.3 4.8 0.00016 41.4 10.4 91 351-471 142-236 (333)
147 1f0y_A HCDH, L-3-hydroxyacyl-C 84.2 1.2 4.1E-05 44.3 5.7 32 356-399 16-47 (302)
148 2j6i_A Formate dehydrogenase; 84.2 3.4 0.00012 43.2 9.3 97 349-471 158-258 (364)
149 2raf_A Putative dinucleotide-b 84.1 2.1 7.2E-05 40.6 7.1 80 351-474 15-94 (209)
150 1x0v_A GPD-C, GPDH-C, glycerol 84.0 2.2 7.5E-05 43.0 7.6 111 355-474 8-128 (354)
151 4dgs_A Dehydrogenase; structur 84.0 5.6 0.00019 41.4 10.8 160 350-552 166-331 (340)
152 3tl2_A Malate dehydrogenase; c 84.0 0.84 2.9E-05 47.0 4.5 106 353-473 6-130 (315)
153 3pqe_A L-LDH, L-lactate dehydr 83.6 0.64 2.2E-05 48.1 3.5 106 355-473 5-125 (326)
154 4fgw_A Glycerol-3-phosphate de 83.5 1.4 4.8E-05 47.0 6.2 22 356-377 35-56 (391)
155 1xdw_A NAD+-dependent (R)-2-hy 83.5 4.8 0.00016 41.4 10.0 91 350-471 141-235 (331)
156 3ic5_A Putative saccharopine d 83.4 1.4 4.9E-05 36.3 5.0 88 354-460 4-92 (118)
157 3k96_A Glycerol-3-phosphate de 83.2 1.1 3.8E-05 46.6 5.1 100 355-474 29-137 (356)
158 3evt_A Phosphoglycerate dehydr 83.0 3.4 0.00012 42.7 8.6 161 350-552 132-301 (324)
159 3ado_A Lambda-crystallin; L-gu 82.9 1.7 5.7E-05 45.1 6.3 33 355-399 6-38 (319)
160 1hye_A L-lactate/malate dehydr 82.8 1.8 6.1E-05 44.0 6.4 102 357-473 2-125 (313)
161 3pp8_A Glyoxylate/hydroxypyruv 82.6 2.3 7.9E-05 43.7 7.2 163 350-552 134-301 (315)
162 1lss_A TRK system potassium up 82.5 1.5 5.2E-05 37.3 5.0 33 355-399 4-36 (140)
163 2pi1_A D-lactate dehydrogenase 82.2 6.3 0.00022 40.7 10.3 95 349-473 135-233 (334)
164 1lu9_A Methylene tetrahydromet 82.1 2.5 8.5E-05 41.9 7.0 75 313-399 71-152 (287)
165 1jay_A Coenzyme F420H2:NADP+ o 81.9 0.82 2.8E-05 42.6 3.2 94 357-474 2-101 (212)
166 1yj8_A Glycerol-3-phosphate de 81.9 1.7 5.9E-05 44.6 5.9 110 356-474 22-145 (375)
167 3abi_A Putative uncharacterize 81.7 1.4 4.7E-05 45.4 5.1 89 356-471 17-109 (365)
168 1y8q_A Ubiquitin-like 1 activa 81.5 1.2 4.1E-05 46.3 4.6 37 352-399 33-69 (346)
169 3gvx_A Glycerate dehydrogenase 81.5 7.3 0.00025 39.6 10.3 159 351-553 118-282 (290)
170 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.5 2.1 7E-05 46.3 6.6 97 357-473 3-106 (478)
171 2w2k_A D-mandelate dehydrogena 81.5 7.9 0.00027 40.0 10.8 97 349-471 157-257 (348)
172 4egb_A DTDP-glucose 4,6-dehydr 81.3 5 0.00017 39.6 8.9 106 353-470 22-149 (346)
173 2yq5_A D-isomer specific 2-hyd 81.3 13 0.00046 38.6 12.4 92 349-471 142-237 (343)
174 3phh_A Shikimate dehydrogenase 81.0 1.3 4.4E-05 44.9 4.5 87 355-470 118-209 (269)
175 3vrd_B FCCB subunit, flavocyto 80.7 1.2 4.2E-05 45.3 4.3 35 355-399 2-36 (401)
176 1tt5_B Ubiquitin-activating en 80.5 1.2 4.1E-05 48.0 4.3 38 351-399 36-73 (434)
177 3c85_A Putative glutathione-re 80.3 2.7 9.3E-05 38.3 6.1 37 352-399 36-72 (183)
178 2pgd_A 6-phosphogluconate dehy 80.1 2.1 7E-05 46.2 6.0 98 356-473 3-104 (482)
179 3b1f_A Putative prephenate deh 80.1 1.5 5.2E-05 43.0 4.6 96 355-472 6-103 (290)
180 1qp8_A Formate dehydrogenase; 80.0 11 0.00037 38.3 11.0 88 351-471 120-211 (303)
181 4dll_A 2-hydroxy-3-oxopropiona 79.8 1.7 5.7E-05 44.0 4.9 34 354-399 30-63 (320)
182 3l6d_A Putative oxidoreductase 79.6 1.5 5.1E-05 44.1 4.5 36 352-399 6-41 (306)
183 3pef_A 6-phosphogluconate dehy 79.6 2 6.8E-05 42.4 5.3 32 356-399 2-33 (287)
184 3doj_A AT3G25530, dehydrogenas 79.5 2.2 7.4E-05 42.9 5.6 36 352-399 18-53 (310)
185 2x0j_A Malate dehydrogenase; o 79.5 2.2 7.5E-05 43.6 5.7 104 357-473 2-121 (294)
186 3i6i_A Putative leucoanthocyan 79.4 1.3 4.4E-05 44.3 3.8 104 352-467 7-117 (346)
187 2z2v_A Hypothetical protein PH 79.1 1.7 5.9E-05 45.3 4.9 120 354-502 15-137 (365)
188 2iz1_A 6-phosphogluconate dehy 79.1 3.4 0.00012 44.4 7.3 99 355-473 5-106 (474)
189 2qrj_A Saccharopine dehydrogen 79.1 4.3 0.00015 43.5 7.9 72 354-457 213-289 (394)
190 2h78_A Hibadh, 3-hydroxyisobut 79.0 1.8 6.3E-05 42.8 4.8 32 356-399 4-35 (302)
191 3r6d_A NAD-dependent epimerase 78.8 2.4 8.3E-05 39.4 5.3 94 356-468 6-106 (221)
192 4gwg_A 6-phosphogluconate dehy 78.7 4.6 0.00016 44.0 8.2 98 356-473 5-106 (484)
193 2nac_A NAD-dependent formate d 78.5 6.5 0.00022 41.8 9.2 166 349-551 185-356 (393)
194 3k6j_A Protein F01G10.3, confi 78.4 2.1 7.3E-05 46.5 5.5 32 356-399 55-86 (460)
195 2uyy_A N-PAC protein; long-cha 78.2 2.8 9.5E-05 41.7 5.9 32 356-399 31-62 (316)
196 2g76_A 3-PGDH, D-3-phosphoglyc 78.2 8.8 0.0003 39.7 9.8 92 350-471 160-256 (335)
197 2vns_A Metalloreductase steap3 78.1 1.7 5.8E-05 41.4 4.1 96 351-474 24-119 (215)
198 2pzm_A Putative nucleotide sug 77.8 6 0.00021 39.1 8.2 104 351-470 16-136 (330)
199 3cky_A 2-hydroxymethyl glutara 77.8 2.3 7.9E-05 41.7 5.1 32 356-399 5-36 (301)
200 3o38_A Short chain dehydrogena 77.8 3.3 0.00011 39.8 6.1 76 352-446 19-112 (266)
201 3pdu_A 3-hydroxyisobutyrate de 77.8 2.2 7.4E-05 42.1 4.9 32 356-399 2-33 (287)
202 1id1_A Putative potassium chan 77.7 2.2 7.6E-05 37.9 4.5 34 354-399 2-35 (153)
203 3fi9_A Malate dehydrogenase; s 77.6 1.6 5.4E-05 45.6 4.1 107 353-473 6-129 (343)
204 3hn2_A 2-dehydropantoate 2-red 77.4 4.9 0.00017 40.2 7.5 101 356-474 3-107 (312)
205 4aj2_A L-lactate dehydrogenase 77.0 1.2 4.2E-05 46.2 3.0 118 352-486 16-149 (331)
206 3gg9_A D-3-phosphoglycerate de 76.9 8.3 0.00028 40.2 9.3 161 350-552 155-325 (352)
207 1dxy_A D-2-hydroxyisocaproate 76.5 16 0.00053 37.6 11.1 92 349-471 139-234 (333)
208 1j4a_A D-LDH, D-lactate dehydr 76.5 14 0.00047 38.0 10.7 93 350-472 141-237 (333)
209 3e8x_A Putative NAD-dependent 76.4 5 0.00017 37.6 6.8 100 351-470 17-131 (236)
210 2q1w_A Putative nucleotide sug 76.3 9.3 0.00032 37.8 9.1 104 352-470 18-137 (333)
211 3qsg_A NAD-binding phosphogluc 76.3 6.7 0.00023 39.5 8.1 34 355-399 24-57 (312)
212 4hb9_A Similarities with proba 76.3 2.3 8E-05 42.4 4.7 32 356-399 2-33 (412)
213 3ldh_A Lactate dehydrogenase; 76.1 1.3 4.3E-05 46.3 2.8 124 355-496 21-163 (330)
214 1y8q_B Anthracycline-, ubiquit 75.9 2.8 9.7E-05 47.4 5.8 37 352-399 14-50 (640)
215 3gpi_A NAD-dependent epimerase 75.3 1.9 6.4E-05 41.7 3.6 97 354-470 2-109 (286)
216 3qha_A Putative oxidoreductase 74.6 3.1 0.00011 41.5 5.1 33 355-399 15-47 (296)
217 3ggo_A Prephenate dehydrogenas 74.5 5.7 0.0002 40.3 7.1 94 355-470 33-128 (314)
218 2x5o_A UDP-N-acetylmuramoylala 74.4 18 0.00061 38.1 11.1 115 352-508 2-116 (439)
219 3ip1_A Alcohol dehydrogenase, 74.3 16 0.00056 37.7 10.7 86 342-445 200-292 (404)
220 3dhn_A NAD-dependent epimerase 74.2 4.5 0.00015 37.4 5.8 95 356-468 5-110 (227)
221 1yb4_A Tartronic semialdehyde 74.0 3.8 0.00013 39.9 5.5 30 356-397 4-33 (295)
222 4b4u_A Bifunctional protein fo 73.9 9.7 0.00033 39.5 8.7 85 333-455 157-242 (303)
223 1sc6_A PGDH, D-3-phosphoglycer 73.8 25 0.00085 37.3 12.1 91 350-471 140-234 (404)
224 4id9_A Short-chain dehydrogena 73.7 8.4 0.00029 38.0 8.0 97 351-470 15-126 (347)
225 3c24_A Putative oxidoreductase 73.7 3.7 0.00013 40.4 5.3 91 356-473 12-104 (286)
226 1vpd_A Tartronate semialdehyde 73.7 2.8 9.7E-05 41.1 4.5 32 356-399 6-37 (299)
227 3hhp_A Malate dehydrogenase; M 73.6 4.8 0.00016 41.4 6.3 103 357-473 2-121 (312)
228 4e5n_A Thermostable phosphite 73.5 7.7 0.00026 40.0 7.9 167 350-552 140-317 (330)
229 1mx3_A CTBP1, C-terminal bindi 73.2 23 0.00079 36.7 11.5 161 351-551 164-333 (347)
230 2dq4_A L-threonine 3-dehydroge 73.2 10 0.00035 38.1 8.6 87 338-444 149-240 (343)
231 3d1c_A Flavin-containing putat 73.0 2.9 9.8E-05 41.5 4.4 35 355-400 4-38 (369)
232 2z1m_A GDP-D-mannose dehydrata 72.8 7.6 0.00026 37.9 7.3 103 354-470 2-127 (345)
233 1gdh_A D-glycerate dehydrogena 72.5 12 0.00041 38.2 9.0 94 350-471 141-239 (320)
234 3fwz_A Inner membrane protein 72.2 2.5 8.4E-05 37.3 3.3 32 356-399 8-39 (140)
235 3slg_A PBGP3 protein; structur 72.0 20 0.00069 35.7 10.3 101 352-470 21-141 (372)
236 3fys_A Protein DEGV; fatty aci 71.7 1.7 5.9E-05 44.9 2.5 151 209-389 16-178 (315)
237 5mdh_A Malate dehydrogenase; o 71.6 1.9 6.5E-05 44.7 2.8 110 356-473 4-132 (333)
238 4a9w_A Monooxygenase; baeyer-v 71.3 2.8 9.7E-05 40.8 3.8 34 355-400 3-36 (357)
239 3nrc_A Enoyl-[acyl-carrier-pro 71.2 6.2 0.00021 38.5 6.2 79 352-447 23-115 (280)
240 3fbs_A Oxidoreductase; structu 71.2 3.6 0.00012 39.2 4.4 32 356-399 3-34 (297)
241 3fg2_P Putative rubredoxin red 71.1 3.8 0.00013 42.1 4.9 37 356-402 2-38 (404)
242 3hyw_A Sulfide-quinone reducta 71.1 3 0.0001 43.6 4.1 34 356-399 3-36 (430)
243 2g5c_A Prephenate dehydrogenas 70.8 6.4 0.00022 38.3 6.3 97 356-473 2-99 (281)
244 3kb6_A D-lactate dehydrogenase 70.6 18 0.00061 37.4 9.8 111 350-494 136-252 (334)
245 3m2p_A UDP-N-acetylglucosamine 70.5 13 0.00045 36.2 8.4 93 356-470 3-109 (311)
246 1bg6_A N-(1-D-carboxylethyl)-L 70.4 5.5 0.00019 39.8 5.8 93 356-471 5-110 (359)
247 2nvu_B Maltose binding protein 70.3 3.1 0.00011 47.4 4.4 35 354-399 410-444 (805)
248 3oz2_A Digeranylgeranylglycero 70.2 3.7 0.00013 40.5 4.4 31 357-399 6-36 (397)
249 3lzw_A Ferredoxin--NADP reduct 70.1 4 0.00014 39.5 4.6 32 356-399 8-39 (332)
250 3klj_A NAD(FAD)-dependent dehy 70.0 4.5 0.00015 41.9 5.2 37 354-402 8-44 (385)
251 3pdi_B Nitrogenase MOFE cofact 69.9 3.9 0.00013 44.1 4.8 107 314-444 274-384 (458)
252 4ezb_A Uncharacterized conserv 69.7 4 0.00014 41.4 4.6 33 356-399 25-57 (317)
253 3f8d_A Thioredoxin reductase ( 69.5 4.1 0.00014 39.2 4.4 33 355-399 15-47 (323)
254 3alj_A 2-methyl-3-hydroxypyrid 69.4 4.5 0.00015 40.9 4.9 38 352-401 8-45 (379)
255 3s2u_A UDP-N-acetylglucosamine 69.0 18 0.00063 36.7 9.4 40 428-471 85-124 (365)
256 3l4b_C TRKA K+ channel protien 68.9 3.7 0.00013 38.7 3.9 95 357-471 2-100 (218)
257 2zbw_A Thioredoxin reductase; 68.6 4.2 0.00014 39.8 4.4 34 355-400 5-38 (335)
258 4b8w_A GDP-L-fucose synthase; 68.0 10 0.00035 36.2 6.9 93 352-470 3-113 (319)
259 3ehe_A UDP-glucose 4-epimerase 67.7 18 0.00062 35.1 8.7 95 357-470 3-114 (313)
260 3ek2_A Enoyl-(acyl-carrier-pro 67.6 5.4 0.00018 38.0 4.8 81 350-446 9-103 (271)
261 3h8l_A NADH oxidase; membrane 67.5 4.8 0.00016 41.2 4.8 36 356-400 2-37 (409)
262 2jae_A L-amino acid oxidase; o 67.4 4.8 0.00016 42.1 4.8 42 348-401 4-45 (489)
263 2ywl_A Thioredoxin reductase r 67.3 5.2 0.00018 35.8 4.4 32 356-399 2-33 (180)
264 3itj_A Thioredoxin reductase 1 67.1 3.6 0.00012 39.9 3.6 33 355-399 22-54 (338)
265 2pv7_A T-protein [includes: ch 67.1 15 0.00051 36.6 8.2 32 356-399 22-54 (298)
266 1n2s_A DTDP-4-, DTDP-glucose o 67.0 6.7 0.00023 37.7 5.5 86 357-470 2-104 (299)
267 3vtz_A Glucose 1-dehydrogenase 66.8 14 0.0005 35.8 7.8 79 350-446 9-92 (269)
268 3dme_A Conserved exported prot 66.7 5.2 0.00018 39.2 4.6 33 355-399 4-36 (369)
269 1i36_A Conserved hypothetical 66.4 9 0.00031 36.8 6.2 30 357-398 2-31 (264)
270 3lxd_A FAD-dependent pyridine 66.3 4.7 0.00016 41.5 4.4 38 354-401 8-45 (415)
271 2c20_A UDP-glucose 4-epimerase 66.1 14 0.00047 36.1 7.5 99 356-470 2-118 (330)
272 2xdo_A TETX2 protein; tetracyc 65.8 5.4 0.00018 40.7 4.7 36 353-400 24-59 (398)
273 2vou_A 2,6-dihydroxypyridine h 65.8 6.5 0.00022 40.0 5.3 34 354-399 4-37 (397)
274 2ahr_A Putative pyrroline carb 65.7 5.1 0.00017 38.5 4.3 90 356-473 4-93 (259)
275 2p5y_A UDP-glucose 4-epimerase 65.7 13 0.00046 36.0 7.3 98 357-470 2-117 (311)
276 3rp8_A Flavoprotein monooxygen 65.5 5.7 0.0002 40.4 4.8 36 353-400 21-56 (407)
277 3cgv_A Geranylgeranyl reductas 65.4 5.5 0.00019 39.8 4.6 34 355-400 4-37 (397)
278 1y56_B Sarcosine oxidase; dehy 65.3 5.5 0.00019 39.8 4.6 34 355-400 5-38 (382)
279 3nix_A Flavoprotein/dehydrogen 65.2 7.2 0.00025 39.5 5.5 34 355-400 5-38 (421)
280 2yy7_A L-threonine dehydrogena 65.2 7.4 0.00025 37.6 5.4 98 356-469 3-117 (312)
281 1yvv_A Amine oxidase, flavin-c 65.2 5.8 0.0002 38.7 4.6 33 356-400 3-35 (336)
282 1ryi_A Glycine oxidase; flavop 65.1 5.5 0.00019 39.7 4.5 35 355-401 17-51 (382)
283 3ab1_A Ferredoxin--NADP reduct 65.1 5.8 0.0002 39.5 4.7 34 355-400 14-47 (360)
284 1e6u_A GDP-fucose synthetase; 64.8 11 0.00039 36.5 6.6 87 355-470 3-107 (321)
285 2q7v_A Thioredoxin reductase; 64.8 5.6 0.00019 38.9 4.4 33 355-399 8-40 (325)
286 3llv_A Exopolyphosphatase-rela 64.7 6.5 0.00022 34.1 4.4 34 354-399 5-38 (141)
287 2cvz_A Dehydrogenase, 3-hydrox 64.6 4 0.00014 39.6 3.3 30 357-399 3-32 (289)
288 3e48_A Putative nucleoside-dip 64.6 11 0.00038 36.1 6.5 97 357-470 2-106 (289)
289 3k7m_X 6-hydroxy-L-nicotine ox 64.5 5.9 0.0002 40.4 4.7 32 357-400 3-34 (431)
290 3c96_A Flavin-containing monoo 64.4 6.4 0.00022 40.3 5.0 35 355-400 4-38 (410)
291 3ef6_A Toluene 1,2-dioxygenase 64.4 6.4 0.00022 40.7 5.0 37 356-402 3-39 (410)
292 2gf3_A MSOX, monomeric sarcosi 64.4 5.8 0.0002 39.6 4.5 35 356-402 4-38 (389)
293 3r9u_A Thioredoxin reductase; 64.0 6 0.00021 37.9 4.4 33 355-399 4-37 (315)
294 3axb_A Putative oxidoreductase 64.0 6.1 0.00021 40.8 4.7 37 351-398 19-55 (448)
295 2q0l_A TRXR, thioredoxin reduc 63.9 6.1 0.00021 38.2 4.5 33 356-399 2-34 (311)
296 2x3n_A Probable FAD-dependent 63.5 5.6 0.00019 40.3 4.3 34 355-400 6-39 (399)
297 2yjz_A Metalloreductase steap4 67.3 1.5 5.1E-05 41.8 0.0 92 353-473 17-108 (201)
298 1tt5_A APPBP1, amyloid protein 63.3 3.6 0.00012 45.4 3.0 38 351-399 28-65 (531)
299 3ew7_A LMO0794 protein; Q8Y8U8 63.3 25 0.00085 31.9 8.3 91 357-470 2-103 (221)
300 2gag_B Heterotetrameric sarcos 63.3 6.9 0.00024 39.2 4.9 36 355-400 21-56 (405)
301 3cty_A Thioredoxin reductase; 63.3 6.2 0.00021 38.4 4.4 33 355-399 16-48 (319)
302 3enk_A UDP-glucose 4-epimerase 63.1 11 0.00037 37.0 6.2 101 355-470 5-129 (341)
303 1zk7_A HGII, reductase, mercur 62.9 6.8 0.00023 41.1 4.9 33 355-399 4-36 (467)
304 4eqs_A Coenzyme A disulfide re 62.8 6.2 0.00021 41.4 4.6 34 357-400 2-35 (437)
305 1k0i_A P-hydroxybenzoate hydro 62.6 7.5 0.00026 39.2 5.0 33 356-400 3-35 (394)
306 2gqw_A Ferredoxin reductase; f 62.3 8.6 0.00029 39.7 5.5 38 355-402 7-44 (408)
307 2q2v_A Beta-D-hydroxybutyrate 62.2 11 0.00037 36.0 5.8 36 352-399 1-37 (255)
308 1xq6_A Unknown protein; struct 62.0 14 0.00047 34.2 6.4 101 353-470 2-133 (253)
309 2uzz_A N-methyl-L-tryptophan o 62.0 6.2 0.00021 39.2 4.2 35 356-402 3-37 (372)
310 2vdc_G Glutamate synthase [NAD 61.9 7.8 0.00027 41.3 5.2 34 354-399 121-154 (456)
311 1c0p_A D-amino acid oxidase; a 61.9 8.2 0.00028 38.5 5.1 34 355-400 6-39 (363)
312 3n74_A 3-ketoacyl-(acyl-carrie 61.9 6.4 0.00022 37.5 4.2 77 351-446 5-94 (261)
313 3dje_A Fructosyl amine: oxygen 61.9 7.1 0.00024 40.0 4.8 37 355-402 6-42 (438)
314 1ygy_A PGDH, D-3-phosphoglycer 61.8 22 0.00076 38.8 8.9 92 350-470 137-232 (529)
315 2dkn_A 3-alpha-hydroxysteroid 61.7 12 0.0004 34.9 5.9 68 357-446 3-73 (255)
316 3tzq_B Short-chain type dehydr 61.6 11 0.00039 36.5 6.0 77 351-446 7-96 (271)
317 3pid_A UDP-glucose 6-dehydroge 61.6 10 0.00034 40.9 6.0 44 436-485 146-189 (432)
318 2gv8_A Monooxygenase; FMO, FAD 61.6 6.6 0.00023 40.9 4.5 36 354-399 5-40 (447)
319 2wm3_A NMRA-like family domain 61.3 5.4 0.00018 38.7 3.6 99 355-471 5-115 (299)
320 3iwa_A FAD-dependent pyridine 61.3 7.4 0.00025 40.8 4.9 37 355-401 3-39 (472)
321 1uzm_A 3-oxoacyl-[acyl-carrier 61.3 22 0.00074 33.9 7.8 78 350-446 10-92 (247)
322 1hdc_A 3-alpha, 20 beta-hydrox 60.6 11 0.00038 36.1 5.7 36 352-399 2-38 (254)
323 2oln_A NIKD protein; flavoprot 60.6 7.1 0.00024 39.4 4.4 35 356-402 5-39 (397)
324 2xve_A Flavin-containing monoo 60.4 7.4 0.00025 41.2 4.7 38 356-399 3-40 (464)
325 2x4g_A Nucleoside-diphosphate- 60.3 23 0.00079 34.6 8.0 97 356-470 14-126 (342)
326 3cmm_A Ubiquitin-activating en 60.1 7.8 0.00027 46.1 5.3 38 351-399 23-60 (1015)
327 3sx6_A Sulfide-quinone reducta 60.1 8.3 0.00028 40.1 4.9 36 356-400 5-40 (437)
328 2q1s_A Putative nucleotide sug 60.1 14 0.00047 37.3 6.4 103 352-470 29-151 (377)
329 2zcu_A Uncharacterized oxidore 60.0 8.4 0.00029 36.7 4.6 98 357-470 1-104 (286)
330 1vl0_A DTDP-4-dehydrorhamnose 60.0 12 0.00042 35.8 5.8 88 352-470 9-113 (292)
331 3gg2_A Sugar dehydrogenase, UD 60.0 10 0.00034 40.7 5.7 32 356-399 3-34 (450)
332 3uox_A Otemo; baeyer-villiger 59.9 8 0.00027 42.2 5.0 35 354-400 8-42 (545)
333 3i1j_A Oxidoreductase, short c 59.6 21 0.00073 33.5 7.4 38 351-399 10-47 (247)
334 4hv4_A UDP-N-acetylmuramate--L 59.6 17 0.00058 39.2 7.4 107 355-497 22-130 (494)
335 3ka7_A Oxidoreductase; structu 59.6 8.5 0.00029 39.0 4.8 32 357-400 2-33 (425)
336 1dxl_A Dihydrolipoamide dehydr 59.6 9 0.00031 40.0 5.1 33 355-399 6-38 (470)
337 3nrn_A Uncharacterized protein 59.5 8.8 0.0003 39.2 4.9 33 357-401 2-34 (421)
338 1vdc_A NTR, NADPH dependent th 59.5 6.5 0.00022 38.4 3.8 32 355-398 8-39 (333)
339 4g6h_A Rotenone-insensitive NA 59.2 4.1 0.00014 43.9 2.5 32 356-399 43-74 (502)
340 3sc6_A DTDP-4-dehydrorhamnose 59.1 7.5 0.00026 37.3 4.1 83 357-470 7-106 (287)
341 3dfz_A SIRC, precorrin-2 dehyd 59.1 7.8 0.00027 38.1 4.3 36 352-399 28-63 (223)
342 2bka_A CC3, TAT-interacting pr 58.9 18 0.00062 33.6 6.6 102 353-470 16-132 (242)
343 1trb_A Thioredoxin reductase; 58.8 5 0.00017 38.9 2.8 34 354-399 4-37 (320)
344 2r9z_A Glutathione amide reduc 58.7 7.9 0.00027 40.8 4.6 33 355-399 4-36 (463)
345 3v76_A Flavoprotein; structura 58.7 7.8 0.00027 40.8 4.5 35 355-401 27-61 (417)
346 3ruf_A WBGU; rossmann fold, UD 58.6 9.1 0.00031 37.8 4.7 101 353-470 23-151 (351)
347 3urh_A Dihydrolipoyl dehydroge 58.6 8.1 0.00028 40.8 4.6 34 355-400 25-58 (491)
348 3k31_A Enoyl-(acyl-carrier-pro 58.6 17 0.00058 35.9 6.7 81 350-446 25-119 (296)
349 1sb8_A WBPP; epimerase, 4-epim 58.5 15 0.00052 36.4 6.4 101 353-470 25-153 (352)
350 3sxp_A ADP-L-glycero-D-mannohe 58.5 24 0.00081 35.2 7.8 108 351-470 6-138 (362)
351 3ec7_A Putative dehydrogenase; 58.4 5.9 0.0002 40.5 3.4 96 353-467 21-116 (357)
352 3i3l_A Alkylhalidase CMLS; fla 58.0 12 0.0004 41.4 6.0 37 353-401 21-57 (591)
353 2cul_A Glucose-inhibited divis 58.0 9.4 0.00032 36.2 4.5 33 355-399 3-35 (232)
354 3h28_A Sulfide-quinone reducta 57.9 8.9 0.0003 39.7 4.7 35 356-400 3-37 (430)
355 4gcm_A TRXR, thioredoxin reduc 57.7 8.5 0.00029 37.5 4.3 32 356-399 7-38 (312)
356 2c5a_A GDP-mannose-3', 5'-epim 57.5 38 0.0013 34.1 9.3 99 354-470 28-145 (379)
357 1dlj_A UDP-glucose dehydrogena 57.3 12 0.0004 39.3 5.5 30 357-399 2-31 (402)
358 1hxh_A 3BETA/17BETA-hydroxyste 57.2 11 0.00037 36.1 4.9 77 352-446 3-91 (253)
359 1mo9_A ORF3; nucleotide bindin 57.2 8.5 0.00029 41.3 4.6 35 354-400 42-76 (523)
360 3qvo_A NMRA family protein; st 57.0 21 0.0007 33.6 6.7 101 353-470 21-125 (236)
361 3s5w_A L-ornithine 5-monooxyge 57.0 8.7 0.0003 39.8 4.4 40 355-401 30-69 (463)
362 2hqm_A GR, grase, glutathione 56.9 7.8 0.00027 40.9 4.2 35 354-400 10-44 (479)
363 3kd9_A Coenzyme A disulfide re 56.5 8.8 0.0003 40.0 4.4 36 355-400 3-38 (449)
364 4ap3_A Steroid monooxygenase; 56.4 8.4 0.00029 42.0 4.4 35 354-400 20-54 (549)
365 4a7p_A UDP-glucose dehydrogena 56.4 49 0.0017 35.5 10.2 33 355-399 8-40 (446)
366 2qae_A Lipoamide, dihydrolipoy 56.4 9.2 0.00031 40.1 4.6 34 355-400 2-35 (468)
367 3tpc_A Short chain alcohol deh 56.3 26 0.00089 33.4 7.4 77 352-446 4-92 (257)
368 3oig_A Enoyl-[acyl-carrier-pro 56.2 18 0.00062 34.5 6.3 80 351-446 3-98 (266)
369 2o7s_A DHQ-SDH PR, bifunctiona 56.2 13 0.00045 40.4 5.8 36 352-399 361-396 (523)
370 1mv8_A GMD, GDP-mannose 6-dehy 56.2 12 0.00041 39.5 5.4 31 357-399 2-32 (436)
371 1q1r_A Putidaredoxin reductase 56.1 11 0.00039 39.2 5.2 37 355-401 4-40 (431)
372 2bc0_A NADH oxidase; flavoprot 56.1 11 0.00038 39.9 5.1 37 355-400 35-71 (490)
373 2e4g_A Tryptophan halogenase; 55.9 10 0.00034 41.0 4.8 38 355-401 25-62 (550)
374 4gde_A UDP-galactopyranose mut 55.8 11 0.00037 39.2 4.9 23 355-377 10-32 (513)
375 3ntd_A FAD-dependent pyridine 55.7 12 0.00043 39.9 5.5 37 356-402 2-38 (565)
376 3k30_A Histamine dehydrogenase 55.7 12 0.00041 41.8 5.6 34 355-400 391-424 (690)
377 3ics_A Coenzyme A-disulfide re 55.6 12 0.00042 40.5 5.5 39 354-402 35-73 (588)
378 2aqj_A Tryptophan halogenase, 55.5 9.8 0.00033 40.8 4.7 37 355-400 5-41 (538)
379 2yqu_A 2-oxoglutarate dehydrog 55.3 9.5 0.00032 39.8 4.4 33 356-400 2-34 (455)
380 1fl2_A Alkyl hydroperoxide red 55.3 9.1 0.00031 36.9 4.0 32 356-399 2-33 (310)
381 2d8a_A PH0655, probable L-thre 55.3 17 0.00058 36.6 6.2 48 339-399 154-201 (348)
382 2qcu_A Aerobic glycerol-3-phos 55.1 10 0.00035 40.3 4.8 34 355-400 3-36 (501)
383 2nu8_A Succinyl-COA ligase [AD 55.0 19 0.00064 36.3 6.4 86 355-466 7-93 (288)
384 3oc4_A Oxidoreductase, pyridin 54.9 12 0.00039 39.2 5.0 36 356-401 3-38 (452)
385 1zmd_A Dihydrolipoyl dehydroge 54.9 9.7 0.00033 40.0 4.4 34 355-400 6-39 (474)
386 1o5i_A 3-oxoacyl-(acyl carrier 54.9 49 0.0017 31.5 9.1 76 351-446 15-92 (249)
387 3ktd_A Prephenate dehydrogenas 54.7 15 0.00052 38.0 5.8 91 356-470 9-101 (341)
388 1ebd_A E3BD, dihydrolipoamide 54.7 9.3 0.00032 39.9 4.2 32 356-399 4-35 (455)
389 2weu_A Tryptophan 5-halogenase 54.7 7.6 0.00026 41.0 3.6 37 356-401 3-39 (511)
390 1ek6_A UDP-galactose 4-epimera 54.4 12 0.00041 36.8 4.8 103 356-470 3-132 (348)
391 1onf_A GR, grase, glutathione 54.4 9.8 0.00034 40.5 4.4 33 356-400 3-35 (500)
392 1m6i_A Programmed cell death p 54.4 8.2 0.00028 41.2 3.8 38 354-401 10-47 (493)
393 1qsg_A Enoyl-[acyl-carrier-pro 54.3 13 0.00045 35.7 4.9 78 353-446 7-98 (265)
394 2v3a_A Rubredoxin reductase; a 54.0 10 0.00035 38.6 4.3 35 355-399 4-38 (384)
395 1w4x_A Phenylacetone monooxyge 54.0 11 0.00039 40.5 4.9 35 354-400 15-49 (542)
396 4hkt_A Inositol 2-dehydrogenas 53.8 11 0.00039 37.6 4.6 89 356-467 4-92 (331)
397 3dqp_A Oxidoreductase YLBE; al 53.7 26 0.0009 32.2 6.7 94 357-470 2-106 (219)
398 2qa2_A CABE, polyketide oxygen 53.7 11 0.00036 40.5 4.6 34 354-399 11-44 (499)
399 1zk4_A R-specific alcohol dehy 53.7 14 0.00046 34.8 4.8 38 351-399 2-39 (251)
400 3uko_A Alcohol dehydrogenase c 53.7 26 0.0009 35.7 7.4 45 343-398 182-226 (378)
401 4a5l_A Thioredoxin reductase; 53.6 9.3 0.00032 36.8 3.8 32 356-399 5-36 (314)
402 3qj4_A Renalase; FAD/NAD(P)-bi 53.6 8.2 0.00028 38.3 3.5 34 357-399 3-36 (342)
403 1ges_A Glutathione reductase; 53.5 9 0.00031 40.1 3.9 33 355-399 4-36 (450)
404 2eq6_A Pyruvate dehydrogenase 53.5 11 0.00036 39.8 4.4 34 355-400 6-39 (464)
405 3fpz_A Thiazole biosynthetic e 53.4 12 0.0004 37.2 4.6 36 354-399 64-99 (326)
406 2hcy_A Alcohol dehydrogenase 1 53.4 32 0.0011 34.5 7.8 45 341-398 157-202 (347)
407 3l8k_A Dihydrolipoyl dehydroge 53.3 12 0.0004 39.4 4.7 35 355-401 4-38 (466)
408 1lvl_A Dihydrolipoamide dehydr 53.2 12 0.0004 39.4 4.7 33 355-399 5-37 (458)
409 3c4a_A Probable tryptophan hyd 53.2 12 0.00042 37.8 4.7 33 357-399 2-34 (381)
410 3rwb_A TPLDH, pyridoxal 4-dehy 53.2 19 0.00066 34.3 5.9 77 351-446 2-91 (247)
411 3ihm_A Styrene monooxygenase A 53.2 9.7 0.00033 39.6 4.1 32 356-399 23-54 (430)
412 3lad_A Dihydrolipoamide dehydr 53.2 13 0.00044 39.0 5.1 33 355-399 3-35 (476)
413 3r1i_A Short-chain type dehydr 53.1 32 0.0011 33.6 7.6 78 351-446 28-120 (276)
414 2qa1_A PGAE, polyketide oxygen 53.0 11 0.00037 40.4 4.5 35 353-399 9-43 (500)
415 2a87_A TRXR, TR, thioredoxin r 52.8 8.6 0.00029 37.9 3.5 34 354-399 13-46 (335)
416 3un1_A Probable oxidoreductase 52.8 42 0.0014 32.3 8.3 75 353-446 26-107 (260)
417 2wpf_A Trypanothione reductase 52.8 14 0.00047 39.5 5.2 32 355-397 7-38 (495)
418 3c4n_A Uncharacterized protein 52.8 13 0.00043 38.2 4.8 35 356-400 37-71 (405)
419 2gn4_A FLAA1 protein, UDP-GLCN 52.7 15 0.00051 37.0 5.2 102 350-470 16-142 (344)
420 2bry_A NEDD9 interacting prote 52.5 13 0.00043 39.9 4.9 37 354-402 91-127 (497)
421 3o0h_A Glutathione reductase; 52.5 12 0.00042 39.5 4.7 33 355-399 26-58 (484)
422 7mdh_A Protein (malate dehydro 52.1 17 0.0006 38.4 5.8 109 355-473 32-161 (375)
423 3grk_A Enoyl-(acyl-carrier-pro 52.0 17 0.00059 35.8 5.5 80 351-446 27-120 (293)
424 3g3e_A D-amino-acid oxidase; F 51.9 14 0.00048 36.6 4.8 38 357-400 2-39 (351)
425 2a8x_A Dihydrolipoyl dehydroge 51.8 12 0.00041 39.1 4.5 33 355-399 3-35 (464)
426 2cdu_A NADPH oxidase; flavoenz 51.8 12 0.00043 38.9 4.6 34 357-400 2-35 (452)
427 3uuw_A Putative oxidoreductase 51.7 11 0.00036 37.4 3.9 90 354-467 5-95 (308)
428 3ihg_A RDME; flavoenzyme, anth 51.7 11 0.00037 40.3 4.2 34 355-400 5-38 (535)
429 1rpn_A GDP-mannose 4,6-dehydra 51.6 31 0.0011 33.6 7.2 105 352-470 11-138 (335)
430 1nhp_A NADH peroxidase; oxidor 51.5 13 0.00043 38.7 4.6 35 357-401 2-36 (447)
431 1gy8_A UDP-galactose 4-epimera 51.5 33 0.0011 34.4 7.6 102 356-469 3-143 (397)
432 1v59_A Dihydrolipoamide dehydr 51.5 13 0.00044 39.0 4.7 34 355-400 5-38 (478)
433 1s3e_A Amine oxidase [flavin-c 51.5 13 0.00044 39.4 4.7 33 355-399 4-36 (520)
434 4fk1_A Putative thioredoxin re 51.4 12 0.00041 36.5 4.2 33 355-399 6-38 (304)
435 1yqd_A Sinapyl alcohol dehydro 51.3 32 0.0011 35.0 7.5 48 339-398 172-219 (366)
436 3moi_A Probable dehydrogenase; 51.1 8.6 0.00029 39.7 3.3 89 356-466 3-92 (387)
437 1xhc_A NADH oxidase /nitrite r 50.7 9.6 0.00033 38.9 3.5 35 355-402 8-42 (367)
438 3rkr_A Short chain oxidoreduct 50.6 38 0.0013 32.4 7.6 75 352-445 26-116 (262)
439 1fmc_A 7 alpha-hydroxysteroid 50.6 20 0.0007 33.5 5.5 37 351-399 7-44 (255)
440 2ydy_A Methionine adenosyltran 50.6 31 0.0011 33.4 7.0 92 355-470 2-110 (315)
441 1rkx_A CDP-glucose-4,6-dehydra 50.5 31 0.0011 34.1 7.1 102 353-470 7-132 (357)
442 4eez_A Alcohol dehydrogenase 1 50.5 35 0.0012 34.0 7.5 45 342-398 152-196 (348)
443 1t2a_A GDP-mannose 4,6 dehydra 50.3 38 0.0013 33.8 7.8 101 356-470 25-156 (375)
444 3gwf_A Cyclohexanone monooxyge 50.3 11 0.00038 41.0 4.1 35 355-400 8-42 (540)
445 1nff_A Putative oxidoreductase 50.3 32 0.0011 33.1 7.0 78 351-446 3-92 (260)
446 3p19_A BFPVVD8, putative blue 50.2 23 0.00078 34.4 6.0 82 350-446 11-98 (266)
447 3i6d_A Protoporphyrinogen oxid 50.2 14 0.00048 37.7 4.6 22 356-377 6-27 (470)
448 3lup_A DEGV family protein; PS 50.2 6.2 0.00021 40.0 1.9 134 234-390 4-148 (285)
449 1kyq_A Met8P, siroheme biosynt 50.2 10 0.00034 38.5 3.5 36 352-399 10-45 (274)
450 2ew2_A 2-dehydropantoate 2-red 50.1 15 0.00051 35.6 4.6 101 356-474 4-112 (316)
451 1lqt_A FPRA; NADP+ derivative, 50.0 15 0.0005 39.1 4.9 39 355-399 3-42 (456)
452 3gaf_A 7-alpha-hydroxysteroid 50.0 33 0.0011 32.9 7.0 78 351-446 8-100 (256)
453 1ojt_A Surface protein; redox- 50.0 13 0.00046 39.1 4.6 34 355-400 6-39 (482)
454 2fwm_X 2,3-dihydro-2,3-dihydro 50.0 60 0.0021 30.7 8.8 77 352-446 4-85 (250)
455 3e1t_A Halogenase; flavoprotei 49.9 11 0.00039 40.1 4.1 34 355-400 7-40 (512)
456 2g7z_A Conserved hypothetical 49.8 26 0.00091 35.3 6.5 123 235-389 6-147 (282)
457 1xdi_A RV3303C-LPDA; reductase 49.8 13 0.00043 39.5 4.3 36 356-400 3-38 (499)
458 4dry_A 3-oxoacyl-[acyl-carrier 49.8 19 0.00065 35.3 5.3 78 350-446 28-122 (281)
459 3uog_A Alcohol dehydrogenase; 49.8 18 0.00061 36.8 5.3 44 343-398 178-221 (363)
460 3nyc_A D-arginine dehydrogenas 49.7 9.7 0.00033 37.6 3.2 33 355-400 9-41 (381)
461 3op4_A 3-oxoacyl-[acyl-carrier 49.6 18 0.00062 34.5 5.1 77 352-446 6-94 (248)
462 2e1m_A L-glutamate oxidase; L- 49.5 15 0.00052 38.5 4.9 35 353-399 42-76 (376)
463 2i0z_A NAD(FAD)-utilizing dehy 49.5 14 0.00047 38.7 4.5 34 356-401 27-60 (447)
464 2wsb_A Galactitol dehydrogenas 49.5 21 0.00071 33.5 5.4 38 351-399 7-44 (254)
465 3h7a_A Short chain dehydrogena 49.4 31 0.001 33.1 6.7 77 352-446 4-94 (252)
466 3st7_A Capsular polysaccharide 49.3 42 0.0014 33.5 8.0 79 357-470 2-94 (369)
467 3ko8_A NAD-dependent epimerase 49.3 42 0.0014 32.3 7.7 94 357-470 2-113 (312)
468 1xg5_A ARPG836; short chain de 49.2 44 0.0015 32.2 7.8 37 352-399 29-65 (279)
469 1o94_A Tmadh, trimethylamine d 49.2 15 0.00051 41.4 5.0 35 354-400 388-422 (729)
470 2zb4_A Prostaglandin reductase 49.1 34 0.0012 34.4 7.3 52 337-399 141-195 (357)
471 1pzx_A Hypothetical protein AP 49.1 15 0.00051 37.2 4.5 128 235-389 4-148 (289)
472 1pqw_A Polyketide synthase; ro 49.1 42 0.0014 30.5 7.3 49 339-399 23-72 (198)
473 2jl1_A Triphenylmethane reduct 49.1 9.5 0.00032 36.4 3.0 99 356-470 1-107 (287)
474 2ehd_A Oxidoreductase, oxidore 49.0 35 0.0012 31.7 6.9 74 355-446 5-89 (234)
475 2gqf_A Hypothetical protein HI 48.9 13 0.00046 38.6 4.3 35 355-401 4-38 (401)
476 2pyx_A Tryptophan halogenase; 48.8 12 0.00041 40.0 4.1 39 355-400 7-52 (526)
477 4dgk_A Phytoene dehydrogenase; 48.7 12 0.0004 39.1 3.8 22 356-377 2-23 (501)
478 2rgh_A Alpha-glycerophosphate 48.7 15 0.00052 40.1 4.9 34 355-400 32-65 (571)
479 3f1l_A Uncharacterized oxidore 48.6 41 0.0014 32.0 7.4 37 351-399 8-45 (252)
480 2fzw_A Alcohol dehydrogenase c 48.6 39 0.0013 34.2 7.7 45 343-398 179-223 (373)
481 3dk9_A Grase, GR, glutathione 48.6 14 0.00047 38.8 4.4 33 355-399 20-52 (478)
482 3lov_A Protoporphyrinogen oxid 48.6 21 0.00073 36.9 5.8 36 355-400 4-39 (475)
483 3mz0_A Inositol 2-dehydrogenas 48.5 25 0.00084 35.4 6.1 93 356-467 3-95 (344)
484 2bi7_A UDP-galactopyranose mut 48.5 15 0.00053 37.8 4.6 34 355-400 3-36 (384)
485 3nks_A Protoporphyrinogen oxid 48.4 13 0.00046 38.3 4.2 34 356-399 3-36 (477)
486 4gqa_A NAD binding oxidoreduct 48.4 15 0.00052 37.9 4.6 110 344-465 14-129 (412)
487 2o23_A HADH2 protein; HSD17B10 48.3 24 0.00082 33.3 5.7 78 351-446 8-97 (265)
488 2gf2_A Hibadh, 3-hydroxyisobut 48.3 13 0.00045 36.2 3.9 31 357-399 2-32 (296)
489 1oi7_A Succinyl-COA synthetase 48.3 24 0.00081 35.6 5.9 148 355-541 7-162 (288)
490 2vvm_A Monoamine oxidase N; FA 48.2 15 0.00051 38.4 4.5 32 356-399 40-71 (495)
491 1h6d_A Precursor form of gluco 48.2 4.1 0.00014 43.1 0.3 94 354-467 82-179 (433)
492 3oqb_A Oxidoreductase; structu 48.1 13 0.00046 37.9 4.1 96 354-467 5-112 (383)
493 3atr_A Conserved archaeal prot 48.1 8.7 0.0003 40.1 2.7 33 356-400 7-39 (453)
494 1p0f_A NADP-dependent alcohol 48.1 40 0.0014 34.1 7.7 38 350-398 187-224 (373)
495 1kol_A Formaldehyde dehydrogen 48.0 40 0.0014 34.5 7.6 49 338-398 170-218 (398)
496 1fec_A Trypanothione reductase 47.7 19 0.00064 38.3 5.3 32 355-397 3-34 (490)
497 3ak4_A NADH-dependent quinucli 47.7 28 0.00095 33.2 6.1 77 352-446 9-97 (263)
498 1cjc_A Protein (adrenodoxin re 47.7 19 0.00066 38.2 5.4 35 355-399 6-40 (460)
499 4eye_A Probable oxidoreductase 47.5 34 0.0012 34.4 6.9 48 339-398 144-192 (342)
500 4b63_A L-ornithine N5 monooxyg 47.5 11 0.00037 40.5 3.4 42 358-399 42-85 (501)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=9.6e-189 Score=1525.40 Aligned_cols=512 Identities=52% Similarity=0.931 Sum_probs=503.3
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhccCCchhHHHHHHHHHhhhhhhhHHhhcc
Q 007156 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (615)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFYrll~~ 181 (615)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++||+|||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCCCcccccchh
Q 007156 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (615)
Q Consensus 182 ~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (615)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc----------
Q 007156 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI---------- 331 (615)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli---------- 331 (615)
|++|||+||||||++|||||||+|||||+||+||+|+|+||+|++|++|++|+||||++|+++|||+++|
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred ------------------ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007156 332 ------------------QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 393 (615)
Q Consensus 332 ------------------QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i 393 (615)
||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 394 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 394 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
||||++|||+++|. +|+++|++||+++++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999995 59999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 474 SQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 474 s~aEctpedA~~wT~GraifASGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
+++||+||||++||+|+|||||||||+||+| +||+++||||||+|||||||||+++++|++|||+|++|||++||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007156 553 QENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 615 (615)
Q Consensus 553 ~~~~~~g~l~P~i~~ir~vs~~VA~aVa~~A~~~GlA~~~~~~~dl~~~i~~~m~~P~Y~~~~ 615 (615)
++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999988788899999999999999999874
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=7.9e-188 Score=1522.04 Aligned_cols=513 Identities=49% Similarity=0.905 Sum_probs=503.9
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhccCCchhHHHHHHHHHhhhhhhhHHhhcc
Q 007156 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (615)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFYrll~~ 181 (615)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++||+|||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCCCcccccchh
Q 007156 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (615)
Q Consensus 182 ~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (615)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc----------
Q 007156 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI---------- 331 (615)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli---------- 331 (615)
|++|||+||||||++|||||||+|||||+||+||+|+|+||+|++|++|++|+||||++|+++|||+++|
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------------------ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007156 332 ------------------QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 393 (615)
Q Consensus 332 ------------------QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i 393 (615)
||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ .|+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcE
Confidence 9999999999999999999999999999999999999999999999987 599999999999
Q ss_pred EEEccCCccccCCccCccccchhhccccCCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 394 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 394 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987776 79999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHcc
Q 007156 472 PTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQ 550 (615)
Q Consensus 472 Pts~aEctpedA~~wT~GraifASGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~ 550 (615)
||+++||+||||++||+|+|||||||||+||+| +||+++||||||+|||||||||+++++|++|||+|++|||++||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007156 551 VTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 615 (615)
Q Consensus 551 v~~~~~~~g~l~P~i~~ir~vs~~VA~aVa~~A~~~GlA~~~~~~~dl~~~i~~~m~~P~Y~~~~ 615 (615)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999988788899999999999999999874
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=4.5e-188 Score=1528.01 Aligned_cols=516 Identities=46% Similarity=0.837 Sum_probs=506.1
Q ss_pred ccccccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhccCCchhHHHHHHHHHhhhhhhhHH
Q 007156 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (615)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFYr 177 (615)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccccCCcccccchHHHHHHHhhhhcCCCccccccCCc--chHHHHhccCCCCCeeEEEEeeCcccccCCCCCCcc
Q 007156 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (615)
Q Consensus 178 ll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 255 (615)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+|+++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhHHHHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc----
Q 007156 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI---- 331 (615)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli---- 331 (615)
|||||||++|||+||||||++|||||||+|||||+||+||+|+|+||+|++|++|++|+||||++|+++|||+++|
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------------------------ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChh
Q 007156 332 ------------------------QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLE 387 (615)
Q Consensus 332 ------------------------QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~e 387 (615)
||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999987 599999
Q ss_pred hhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 388 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 388 eArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999995 59999999999877778999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHH
Q 007156 468 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 547 (615)
Q Consensus 468 aLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aL 547 (615)
||||||+++||+||||++||+|+|||||||||+||+|+||+++||||||+|||||||||+++++|++|||+|++|||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccCCccCCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007156 548 AGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 615 (615)
Q Consensus 548 A~~v~~~~~~~g~l~P~i~~ir~vs~~VA~aVa~~A~~~GlA~~~~~~~dl~~~i~~~m~~P~Y~~~~ 615 (615)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999988788899999999999999999874
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=2.8e-107 Score=872.74 Aligned_cols=370 Identities=28% Similarity=0.373 Sum_probs=333.3
Q ss_pred ccCccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCCC-ccccc
Q 007156 180 IDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGI 258 (615)
Q Consensus 180 ~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 258 (615)
+++.+ .||++||||||++|++|+ +|++++++++.+| ++|||||||||||||||||+ +||||
T Consensus 55 ~~~~~-dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGFN-WFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSGG-GHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCHH-HCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCch
Confidence 33444 599999999999999985 4566777666666 48999999999999999999 59999
Q ss_pred chhhHHHHhhhcCCCCCceeeeeecCCCCccccccC------------cccccccccCCChhhHHHHHHHHHHHHHHHhC
Q 007156 259 PVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDD------------EFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 326 (615)
Q Consensus 259 ~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~D------------p~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~g 326 (615)
||||++|||+||||| |||||||+||+|. ++| |-|.|++.|++..++|++++++ .++++.
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~~--~~d~defve~v~~~~P~fG~InlEDf~ap~af~il~r----yr~~~~ 187 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKEG--KNDPDAVIEFVQRIQHTFGAINLEDISQPNCYKILDV----LRESCD 187 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTTS--CBCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHH----HHHHCS
T ss_pred hhhHHHHHHhcCCCc---eeeeEEeCCCccc--cCCHHHHHHHHHHhCCCCCeecHhhcCCchHHHHHHH----HHhhcc
Confidence 999999999999999 9999999997554 343 7789999999999999998866 577765
Q ss_pred ccccc---ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc
Q 007156 327 ERILI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 403 (615)
Q Consensus 327 p~vli---QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~ 403 (615)
..|++ ||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++ ++|||||++|||+
T Consensus 188 ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~i~l~D~~Gli~ 258 (487)
T 3nv9_A 188 IPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KKIVMFDSKGSLH 258 (487)
T ss_dssp SCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GGEEEEETTEECC
T ss_pred CCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----ccEEEEecccccc
Confidence 56776 999999999999999999999999999999999999999999975 49986 8999999999999
Q ss_pred cCCccCcc-----ccchhhccccC--CCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHccCCCcEEEecCCCCCc
Q 007156 404 SSRLESLQ-----HFKKPWAHEHE--PVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 475 (615)
Q Consensus 404 ~~R~~~L~-----~~k~~fA~~~~--~~~~L~e~V~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erPIIFaLSNPts~ 475 (615)
++|.+ |+ ++|.+||++.+ +.++|+|||+. +|||||+|++ +|+||+|||++|+ +|||||||||||
T Consensus 259 ~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PIIFaLSNPt-- 330 (487)
T 3nv9_A 259 NGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKPIVFCCANPV-- 330 (487)
T ss_dssp TTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSCEEEECCSSS--
T ss_pred CCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCCEEEECCCCC--
Confidence 99954 74 45677888653 45799999998 7999999976 7999999999995 899999999999
Q ss_pred CCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCccC
Q 007156 476 SECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQEN 555 (615)
Q Consensus 476 aEctpedA~~wT~GraifASGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~~~ 555 (615)
+||+||||++ +|+||||||| +++|||+||+|+|||||||+++++|++|||+|+++||++||+++++++
T Consensus 331 pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~ 398 (487)
T 3nv9_A 331 PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAEKRG 398 (487)
T ss_dssp CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHHHHHhhCCccc
Confidence 7999999998 5999999995 678999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007156 556 FDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRL-PPPKDLVKYAESCM 606 (615)
Q Consensus 556 ~~~g~l~P~i~~ir~vs~~VA~aVa~~A~~~GlA~~~-~~~~dl~~~i~~~m 606 (615)
+.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++++
T Consensus 399 l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 399 INPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp CBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred CCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999 799999999999999999999976 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.1e-100 Score=812.71 Aligned_cols=356 Identities=26% Similarity=0.403 Sum_probs=321.9
Q ss_pred hhhHHhhccCccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCC
Q 007156 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (615)
Q Consensus 173 ~LFYrll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (615)
.+++++.+++.| +|||+||||||++|++|+ ++|.++| +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~---~~p~~v~--------------~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKH-DLSIAYTPGVASVSSAIA---KDKTLAY--------------DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHH-HHHHHSTTTTHHHHHHHH---HCGGGHH--------------HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHH-HCeEEECchHHHHHHHHH---hCHHHHH--------------HhcccCCEEEEEECCccccCCCCcc
Confidence 567788888876 589999999999999986 4554444 6899999999999999999999999
Q ss_pred Cc-ccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccccc-----CcccccccccCCChhhHHHHHHHHHHHHHHHhC
Q 007156 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLD-----DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 326 (615)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~-----Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~g 326 (615)
++ |||||+||+.|||+||||| |+|||||+| +.+|+.+ -|.|.|++.+++..++|++++++ .+.+..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~-~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~----~r~~~~ 156 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTK-DTEEIISIVKALAPTFGGINLEDISAPRCFEIEQR----LIKECH 156 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCC-CHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHH----HHHHCS
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCC-CHHHHHHHHHHcCCceeEeccccCCChHHHHHHHH----hhhcCC
Confidence 98 9999999999999999999 999999999 5787743 38889999999999999998866 455544
Q ss_pred ccccc---ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc
Q 007156 327 ERILI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 403 (615)
Q Consensus 327 p~vli---QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~ 403 (615)
.+++. ||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+ |+ ++||++|++|||+
T Consensus 157 ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~-----Ga------~~I~v~D~~Gli~ 225 (398)
T 2a9f_A 157 IPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA-----GA------TKVTVVDKFGIIN 225 (398)
T ss_dssp SCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEETTEECC
T ss_pred cceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEECCCccc
Confidence 46666 9999999999999999999999999999999999999999999874 64 8999999999999
Q ss_pred cCCccCccccchhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCH
Q 007156 404 SSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTA 480 (615)
Q Consensus 404 ~~R~~~L~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctp 480 (615)
++|.++|+++|++||++.+. ..+|+|+|+. +|||||+|+ +|+||+|+|++|+ ++|||||||||| |||+|
T Consensus 226 ~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma---~~pIIfalsNPt--~E~~p 297 (398)
T 2a9f_A 226 EQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA---ARPVIFAMANPI--PEIYP 297 (398)
T ss_dssp TTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC---SSCEEEECCSSS--CSSCH
T ss_pred CCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC---CCCEEEECCCCC--ccCCH
Confidence 99933599999999987543 4689999998 899999999 8899999999997 899999999999 89999
Q ss_pred HHHhcccCCcEEEeeCCCCCCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCccCCCCCC
Q 007156 481 EEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGL 560 (615)
Q Consensus 481 edA~~wT~GraifASGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~~~~~~g~ 560 (615)
|||++| |+|||||| |+++|||+||+|+|||||||+++++|++|||+|+++||++||++++++++.++.
T Consensus 298 e~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~~~~ 365 (398)
T 2a9f_A 298 DEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAAKGIASLVPDDALSTTN 365 (398)
T ss_dssp HHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSCCSC
T ss_pred HHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCcccCCCCc
Confidence 999999 99999999 589999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHc
Q 007156 561 LYPPFKNIRKISAHIAAEVAAKAYEL 586 (615)
Q Consensus 561 l~P~i~~ir~vs~~VA~aVa~~A~~~ 586 (615)
|||++++ ++||.+||.||+++|+++
T Consensus 366 i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 366 IIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp CSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred cCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 9999999 999999999999999865
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=7.6e-96 Score=774.32 Aligned_cols=349 Identities=26% Similarity=0.428 Sum_probs=320.4
Q ss_pred hhhHHhhccCccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCC
Q 007156 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (615)
Q Consensus 173 ~LFYrll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (615)
..++++.++|.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 6788999999886 89999999999999986 5565554 6899999999999999999999999
Q ss_pred Cc-ccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccccc-----CcccccccccCCChhhHHHHHHHHHHHHHHHhC
Q 007156 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLD-----DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 326 (615)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~-----Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~g 326 (615)
++ |||||+||+.|||+||||| |+|||||+| +.+|+++ -|.|.|++.+++..++|+++.++ ++.+..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~-~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r----~r~~~~ 160 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSES-EEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQR----LSEEMN 160 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC-CHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHH----HHHHCS
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCC-CHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHH----hhhhcC
Confidence 98 9999999999999999999 999999999 5777743 37789999999999999988755 566655
Q ss_pred ccccc---ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc
Q 007156 327 ERILI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 403 (615)
Q Consensus 327 p~vli---QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~ 403 (615)
.+++. ||||+|++||+++|+|++|++++|+||||+|||+||++||++|+.. | .++||++|++|||+
T Consensus 161 Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~-----G------~~~I~v~Dr~Gli~ 229 (388)
T 1vl6_A 161 IPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL-----G------VKNVVAVDRKGILN 229 (388)
T ss_dssp SCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH-----T------CCEEEEEETTEECC
T ss_pred cceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC-----C------CCeEEEEECCCccc
Confidence 56666 9999999999999999999999999999999999999999999874 5 48999999999999
Q ss_pred cCCccC-ccccchhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCC
Q 007156 404 SSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECT 479 (615)
Q Consensus 404 ~~R~~~-L~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct 479 (615)
.+|.+. |+++|++||++.+. ..+|+|+|+. +|+|||+|+ +|+||+|+|+.|+ ++||||+||||| |||+
T Consensus 230 ~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~Ma---~~pIIfalSNPt--~E~~ 301 (388)
T 1vl6_A 230 ENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKKMS---RKPVIFALANPV--PEID 301 (388)
T ss_dssp TTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTTSC---SSCEEEECCSSS--CSSC
T ss_pred CCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHhcC---CCCEEEEcCCCC--CCCC
Confidence 999643 99999999987543 4689999998 899999999 7999999999996 799999999999 9999
Q ss_pred HHHHhcccCCcEEEeeCCCCCCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCccCCCCC
Q 007156 480 AEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKG 559 (615)
Q Consensus 480 pedA~~wT~GraifASGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~~~~~~g 559 (615)
||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ |||+|+++||++||+++ ++.++
T Consensus 302 p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~~~m~~aAa~alA~~~---~~~~~ 365 (388)
T 1vl6_A 302 PELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-ITKNMLLSAVEAIARSC---EPEPE 365 (388)
T ss_dssp HHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CCHHHHHHHHHHHHHTS---CCBTT
T ss_pred HHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cCHHHHHHHHHHHHhhh---ccCCC
Confidence 9999999 99999999 589999999999999999999999999 99999999999999999 67889
Q ss_pred CccCCCCChhhhHHHHHHHHHHHH
Q 007156 560 LLYPPFKNIRKISAHIAAEVAAKA 583 (615)
Q Consensus 560 ~l~P~i~~ir~vs~~VA~aVa~~A 583 (615)
.|||++++ ++||.+||.||+++|
T Consensus 366 ~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 366 RIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp BSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred cccCCCCc-chhhHHHHHHHHhhC
Confidence 99999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.8e-78 Score=651.46 Aligned_cols=380 Identities=28% Similarity=0.423 Sum_probs=335.9
Q ss_pred hhhHHhhccCccccCCcccccchHHHHHHHhhhhcCCCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCC
Q 007156 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (615)
Q Consensus 173 ~LFYrll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (615)
..++++.+++.| +|||+||||||++|++|++ |++++++ ||.++++|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 456777788877 5899999999999999873 6677664 888899999999999999999999
Q ss_pred Cc-ccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccccc-----CcccccccccCCChhhHHHHHHHHHHHHHHHhC
Q 007156 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLD-----DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 326 (615)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~-----Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~g 326 (615)
.+ ++|+++||++||++||||| ++|++||+. +.+++.+ -|-|.|++.|+++-|.++++++.. ++...
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~-d~de~~~~v~~l~~~f~GinvED~T~P~k~~il~~l----~~avN 154 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ-EPNKFIDIVKAIAPTFGGINLEDIASPKCFYILERL----REELD 154 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC-SHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHH----HHHCS
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC-CHHHHHHHHHHhCccCcEEEEEeCCCchHHHHHHHH----HHhcC
Confidence 97 8999999999999999999 999999993 6666522 166799999999999999987664 33321
Q ss_pred ccccc---ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc----cC
Q 007156 327 ERILI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD----SK 399 (615)
Q Consensus 327 p~vli---QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD----~~ 399 (615)
-.++. ||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|.. .|++ +++||++| ++
T Consensus 155 t~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~-----~G~~----~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 155 IPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE-----AGVK----PENVRVVELVNGKP 225 (439)
T ss_dssp SCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----TTCC----GGGEEEEEEETTEE
T ss_pred EEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----cCCC----cCeEEEEEccCCCc
Confidence 11222 899999999999999999999999999999999999999999986 3765 37999999 99
Q ss_pred CccccCCccC---ccccchhhccccC---CCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 400 GLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 400 GLi~~~R~~~---L~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
||++++ .. |++++++|++... ...+|.|+++. +|+|||+|+++ |+|++++++.|+ ++||||+||||
T Consensus 226 G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e~v~~m~---~~~iVfDLynP 298 (439)
T 2dvm_A 226 RILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQWIEKMN---EDAIVFPLANP 298 (439)
T ss_dssp EECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHHHHTTSC---TTCEEEECCSS
T ss_pred Cccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCChHHHHhcC---CCCEEEECCCC
Confidence 999887 24 7888889987543 24689999986 89999999985 899999999885 89999999999
Q ss_pred CCcCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 473 TSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 473 ts~aEctpedA~~wT~GraifASGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
+ +||++++|++| |.+++||| +++.|+|+||+|+|||||+|+++++|++|||+|+++||++||++++
T Consensus 299 ~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~a~~i~~~m~~aaa~ala~~~~ 364 (439)
T 2dvm_A 299 V--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASIVE 364 (439)
T ss_dssp S--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHTSS
T ss_pred C--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhcCCCCCCHHHHHHHHHHHHhhCc
Confidence 9 99999999998 88999998 4899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCC
Q 007156 553 QENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 611 (615)
Q Consensus 553 ~~~~~~g~l~P~i~~ir~vs~~VA~aVa~~A~~~GlA~~~~~~~dl~~~i~~~m~~P~Y 611 (615)
++ ..+.|||++++ ++||.+||.||+++|+++|+|+..++++|+.+|+++.||.+.|
T Consensus 365 ~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 365 EP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp SC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhHH
Confidence 76 68999999999 9999999999999999999998777788999999999998754
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.45 E-value=9.2e-07 Score=95.56 Aligned_cols=118 Identities=15% Similarity=0.246 Sum_probs=94.4
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
+||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++.+|++..
T Consensus 200 yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D~dp~---------- 254 (435)
T 3gvp_A 200 YCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTEIDPI---------- 254 (435)
T ss_dssp HHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCHH----------
T ss_pred hhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEeCChh----------
Confidence 89999999999765 7999999999999999999999999864 363 6888887532
Q ss_pred ccchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHH
Q 007156 412 HFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 483 (615)
Q Consensus 412 ~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA 483 (615)
+...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|+..+..
T Consensus 255 --ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~EId~~~L 318 (435)
T 3gvp_A 255 --CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TEIDVASL 318 (435)
T ss_dssp --HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TTBTGGGG
T ss_pred --hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--ccCCHHHH
Confidence 111111 11123579999986 99999998888999999999996 778999999997 88887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.28 E-value=1.5e-06 Score=94.00 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=95.9
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
.||+.+++.|++. .++..|.+.+++|+|.|..|.++|+.+... |. +++++|++..
T Consensus 191 ~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga-------~Viv~D~~p~---------- 245 (436)
T 3h9u_A 191 YGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA-------RVVVTEVDPI---------- 245 (436)
T ss_dssp HHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHH----------
T ss_pred ccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCChh----------
Confidence 5999999999964 569999999999999999999999998642 53 6888888421
Q ss_pred ccchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhc
Q 007156 412 HFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 485 (615)
Q Consensus 412 ~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~ 485 (615)
+...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|++. .|+.++...+
T Consensus 246 --~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvgRg~--vEID~~~L~~ 311 (436)
T 3h9u_A 246 --NALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIGHFD--TEIQVAWLKA 311 (436)
T ss_dssp --HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECSSSG--GGBCHHHHHH
T ss_pred --hhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeCCCC--CccCHHHHHh
Confidence 111111 11123589999986 99999988888899999999995 789999999998 8999988765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.08 E-value=8.9e-06 Score=86.40 Aligned_cols=213 Identities=15% Similarity=0.214 Sum_probs=127.9
Q ss_pred CcchHHHHhccCCCCCeeEEEEeeCcccccCCCCCCc--ccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccccc--
Q 007156 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLD-- 293 (615)
Q Consensus 218 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~-- 293 (615)
++..++++.++ +.+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.++.++
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~~~~i~~l 90 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPLDDEIALL 90 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCCHHHHTTC
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCCHHHHHHh
Confidence 44556666553 4689999999999999999875 8889888 66776 2 567777643323222
Q ss_pred --CcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc----------c----cchHHHHHHHHHHHHHh----CC--
Q 007156 294 --DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI----------Q----GTASVVLAGLISAMKFL----GG-- 351 (615)
Q Consensus 294 --Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli----------Q----GTAaVvLAgll~Alr~~----g~-- 351 (615)
.--+++.-+. .|+. +.++++++ .|..++- | .+....+|| .+|++.. ++
T Consensus 91 ~~~~~li~~~~~-----~~d~---~~~~al~~-~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~ 160 (401)
T 1x13_A 91 NPGTTLVSFIWP-----AQNP---ELMQKLAE-RNVTVMAMDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFF 160 (401)
T ss_dssp CTTCEEEECCCG-----GGCH---HHHHHHHH-TTCEEEEGGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCS
T ss_pred cCCCcEEEEecC-----CCCH---HHHHHHHH-CCCEEEEeehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhccccc
Confidence 2223333222 2222 22345554 4455431 2 345555555 3343332 22
Q ss_pred --------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc-----------
Q 007156 352 --------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH----------- 412 (615)
Q Consensus 352 --------~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~----------- 412 (615)
.+...+|+|+|+|.+|.++++++.. .| | +++++|++.-..... ..+..
T Consensus 161 ~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~G-----a--~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~ 227 (401)
T 1x13_A 161 TGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LG-----A--IVRAFDTRPEVKEQV-QSMGAEFLELDFKEEA 227 (401)
T ss_dssp SCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEECSCGGGHHHH-HHTTCEECCC------
T ss_pred CCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEcCCHHHHHHH-HHcCCEEEEecccccc
Confidence 2568999999999999999988754 25 2 589999864321100 00100
Q ss_pred -cchhhccccCC------CCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 413 -FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 413 -~k~~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.+..|++...+ ..+|.+.++. .|++|++...+ .+++++.++.|. +..+|+-+|+|.
T Consensus 228 ~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk---~g~vIVdva~~~ 295 (401)
T 1x13_A 228 GSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK---AGSVIVDLAAQN 295 (401)
T ss_dssp --CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred cccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---CCcEEEEEcCCC
Confidence 00011111000 0147788875 99999995332 678999999995 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.51 E-value=0.00054 Score=74.65 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=90.2
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
.||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+.. .|+ +++.+|.+.. +
T Consensus 227 yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lra-----fGa-------~Viv~d~dp~----~----- 282 (464)
T 3n58_A 227 YGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAG-----AGA-------RVKVTEVDPI----C----- 282 (464)
T ss_dssp HHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSHH----H-----
T ss_pred hcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCCcc----h-----
Confidence 799998888885 567999999999999999999999998854 253 6888876421 0
Q ss_pred ccchhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHh
Q 007156 412 HFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAY 484 (615)
Q Consensus 412 ~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~ 484 (615)
...|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+... .|+..+...
T Consensus 283 ---a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvGRgd--vEID~~aL~ 346 (464)
T 3n58_A 283 ---ALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIGHFD--NEIQVAALR 346 (464)
T ss_dssp ---HHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECSSST--TTBTCGGGT
T ss_pred ---hhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcCCCC--cccCHHHHH
Confidence 01111 11123479999986 99999998888899999999995 778888888876 666665443
No 12
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.16 E-value=0.0044 Score=64.99 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=119.9
Q ss_pred cchHHHHhccCCCCCeeEEEEeeCcccccCCCCCCc--ccccchhhHHHHhhhcCCCCCceeeeeecCCCC-----cccc
Q 007156 219 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEKL 291 (615)
Q Consensus 219 ~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----ne~L 291 (615)
+..+.++.+ .+.+|+|.++++...|+.|.... |..|..++..++ ++. +|+|.+.+- .++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCHHH
Confidence 445555554 35789999999999999998764 778888877666 333 356666543 2332
Q ss_pred cc----CcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc-----ccc---------hHHHHH---HHHHHHHHhC
Q 007156 292 LD----DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI-----QGT---------ASVVLA---GLISAMKFLG 350 (615)
Q Consensus 292 L~----Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli-----QGT---------AaVvLA---gll~Alr~~g 350 (615)
++ .-.+++.-+.-. +. +.++++.++ |..++- +-+ ....+| +++.+.+..+
T Consensus 87 i~~l~~~~~~i~~~~~~~-----~~---~~~~~~~~~-gi~~~~~e~~~~~~~~~~l~~l~~~a~~ag~~av~~~~~~~~ 157 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGALT-----NR---PVVEALTKR-KITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFA 157 (384)
T ss_dssp GGGSCTTCEEEEECCGGG-----CH---HHHHHHHHT-TCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHhhccCCEEEEEecccC-----CH---HHHHHHHHC-CCEEEEeccccccccccccchhhHHHHHHHHHHHHHHHHHhh
Confidence 21 122334433221 11 122333332 233321 101 111122 4555666555
Q ss_pred C----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch-----
Q 007156 351 G----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----- 415 (615)
Q Consensus 351 ~----------~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~----- 415 (615)
+ .+...||+|+|+|.+|.++++++.. .|. +++++|++.- |.+.+..+-.
T Consensus 158 ~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~~~~~~~~Ga~~~~i 221 (384)
T 1l7d_A 158 RAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----TKEQVESLGGKFITV 221 (384)
T ss_dssp SCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----THHHHHHTTCEECCC
T ss_pred hcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----HHHHHHHcCCeEEee
Confidence 3 5788999999999999999988754 352 4999998532 1110111000
Q ss_pred ------------hhccccC------CCCCHHHHHhccCCcEEEEcc---C--CCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 416 ------------PWAHEHE------PVKELVDAVNAIKPTILIGTS---G--QGRTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 416 ------------~fA~~~~------~~~~L~e~V~~vkPtvLIG~S---~--~~g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
.|++... ....|.+.++. .|++|.++ + .+.+++++.++.|. +..+|+-+|-+
T Consensus 222 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk---~g~vivdva~~ 296 (384)
T 1l7d_A 222 DDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK---PGSVIIDLAVE 296 (384)
T ss_dssp -----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC---TTCEEEETTGG
T ss_pred cccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---CCCEEEEEecC
Confidence 1111100 00127777775 99999988 3 23478999999995 67789888864
No 13
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.10 E-value=0.00065 Score=72.91 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc--------------cchhh
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH--------------FKKPW 417 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~--------------~k~~f 417 (615)
.+...||+|+|+|.+|..+|+++... |. +++++|++.-......+ +.. -+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988642 52 68999997532111000 100 01124
Q ss_pred ccccCC------CCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCcEEEecCC-CCCcCCCC
Q 007156 418 AHEHEP------VKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECT 479 (615)
Q Consensus 418 A~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSN-Pts~aEct 479 (615)
+++..+ ..+|.|+++. .|++|++... +.+||+|+++.|. +..||+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 1378999987 9999998533 3589999999995 7899999995 33345554
No 14
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.93 E-value=0.0021 Score=70.58 Aligned_cols=122 Identities=17% Similarity=0.229 Sum_probs=91.8
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
+||+..++.|+. |.++..|.+.+++|.|+|..|.+||+.+.. .|. +++++|++.. + ..
T Consensus 245 yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA-------~Viv~D~~~~----~---a~ 302 (488)
T 3ond_A 245 YGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA-------RVIVTEIDPI----C---AL 302 (488)
T ss_dssp HHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCHH----H---HH
T ss_pred ccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHH----H---HH
Confidence 799999999887 788999999999999999999899888865 362 7888887521 1 11
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcc
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 486 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~w 486 (615)
... ...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.+++. .|+..++.-.|
T Consensus 303 ~Aa----~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 303 QAT----MEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGHFD--NEIDMLGLETH 366 (488)
T ss_dssp HHH----HTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSSTT--TTBTHHHHHTS
T ss_pred HHH----HhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCCCC--cccchHHHHHh
Confidence 111 111112456666664 89999998888899999998885 688999999985 78888776555
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.82 E-value=0.0088 Score=64.61 Aligned_cols=122 Identities=21% Similarity=0.182 Sum_probs=88.0
Q ss_pred cchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 333 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 333 GTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
-||--+..++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++... |+.
T Consensus 199 aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~G--lD~ 265 (424)
T 3k92_A 199 ATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPDG--LDI 265 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTTC--CCH
T ss_pred cHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCCC--CCH
Confidence 367777788888899999999999999999999999999999764 52 45679999999997642 322
Q ss_pred cc-hhhccccC-------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 413 FK-KPWAHEHE-------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 413 ~k-~~fA~~~~-------~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
.. +.+..... ..-+-.+. -.++.||||=+..+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 266 ~~l~~~~~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 266 PYLLDKRDSFGMVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp HHHHHHCCSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHHHHHHHhCCCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 11 11111111 11123343 45689999988774 69999988876 5788888888 65
No 16
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.67 E-value=0.0022 Score=68.38 Aligned_cols=100 Identities=22% Similarity=0.221 Sum_probs=67.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc-------------chhhcc
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-------------KKPWAH 419 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~-------------k~~fA~ 419 (615)
+...||+|+|+|.+|..+|+.+... |. +++++|++.-.. +.+.+. ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l----~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVA----EQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGH----HHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHH----HHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988653 52 689999864211 111110 011221
Q ss_pred cc------CCCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 420 EH------EPVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 420 ~~------~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.. ....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 10 012368888886 9999997433 3579999999995 788999998644
No 17
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.50 E-value=0.065 Score=58.33 Aligned_cols=155 Identities=16% Similarity=0.121 Sum_probs=106.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHhCccccc--------------------------------------------ccchHHHH
Q 007156 304 RAIGQEYAELLHEFMTAVKQNYGERILI--------------------------------------------QGTASVVL 339 (615)
Q Consensus 304 Ri~g~ey~~~vdeFv~Av~~~~gp~vli--------------------------------------------QGTAaVvL 339 (615)
..+..|-..|...||..+.+.+||.+-| .-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 3466677778888888887777776544 22676677
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .|+..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 78888899999999999999999999999999999763 53 5566788999988754 24332211110
Q ss_pred c--cCCCCCHHHH-------------HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 420 E--HEPVKELVDA-------------VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 420 ~--~~~~~~L~e~-------------V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
+ ......+.+. +-.++.|||+=+..+ +.+|++-++.+.+ +.-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a-~g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIA-NGVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHh-cCceEEecCCCCCC
Confidence 0 0001112221 234689999988774 5999999999864 22357777777 55
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.45 E-value=0.012 Score=63.45 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=84.1
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCccccCCccC---
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLES--- 409 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~-lvD~~GLi~~~R~~~--- 409 (615)
||-=+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++...-+
T Consensus 197 Tg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~Gld~~~ 264 (419)
T 3aoe_E 197 AGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPEGLDVAE 264 (419)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTTCCCHHH
T ss_pred hHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCCCCCHHH
Confidence 5555666777888889999999999999999999999998865 35 3555 999999998764311
Q ss_pred ccccchhhccccC--CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 410 LQHFKKPWAHEHE--PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 410 L~~~k~~fA~~~~--~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
|..++...-. .. .... .+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |+
T Consensus 265 l~~~~~~~g~-v~~~~~~~-~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~ 323 (419)
T 3aoe_E 265 VLSAYEATGS-LPRLDLAP-EE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGL 323 (419)
T ss_dssp HHHHHHHHSS-CSCCCBCT-TT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCB
T ss_pred HHHHHHhhCC-cceeeccc-hh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcC
Confidence 2222221100 00 0110 12 34578999998876 669999988877 5679998988 65
No 19
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.04 E-value=0.015 Score=60.38 Aligned_cols=93 Identities=20% Similarity=0.282 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccc
Q 007156 336 SVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK 414 (615)
Q Consensus 336 aVvLAgll~Alr~~g~~L~d~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k 414 (615)
-+|-.|++-.++..+.++...++|++|+| ..|.-+|.++... | .++++++++
T Consensus 146 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------------- 198 (301)
T 1a4i_A 146 PCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK--------------- 198 (301)
T ss_dssp CHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT---------------
T ss_pred CchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC---------------
Confidence 56778899999999999999999999999 5799999988652 4 468888743
Q ss_pred hhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 415 KPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 415 ~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ---------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ---------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ---------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ---------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999985 44566666644
No 20
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.94 E-value=0.018 Score=58.47 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 418 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA 418 (615)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 35788888888889999999999999887777777654 364 689999884 222 222222222
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 419 HE-------HEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 419 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
.. ..+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888886 89999887754
No 21
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.84 E-value=0.05 Score=59.05 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=83.7
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccC---c
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---L 410 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~---L 410 (615)
||-=+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++...=+ |
T Consensus 214 Tg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l 282 (440)
T 3aog_A 214 TGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDL 282 (440)
T ss_dssp HHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHH
Confidence 55555666777888899999999999999999999999998753 52 3344999999998865311 2
Q ss_pred cccchhhcc--c--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 411 QHFKKPWAH--E--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 411 ~~~k~~fA~--~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
..++..+-. + ....-+-.+ +-.++.||||=++. ++.+|++-++.+ .-.+|.--+| |+
T Consensus 283 ~~~~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 283 LRHVQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHHHHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHHHhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 222222110 0 000112334 44578999998776 568888888776 5678888887 55
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.84 E-value=0.023 Score=58.53 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc
Q 007156 335 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 413 (615)
Q Consensus 335 AaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~ 413 (615)
.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+++++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----K-------ATVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC--------------
Confidence 3467778889999999999999999999987 899999998752 4 257777652
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 007156 414 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 455 (615)
Q Consensus 414 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~ 455 (615)
..+|.+.++. +|++|...+.++.++.|+|+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899987 99999999999999998874
No 23
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.76 E-value=0.035 Score=55.82 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch
Q 007156 336 SVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK 415 (615)
Q Consensus 336 aVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~ 415 (615)
+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...+
T Consensus 136 svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~~~- 195 (293)
T 3d4o_A 136 PTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LARIA- 195 (293)
T ss_dssp HHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHH-
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHH-
Confidence 34434444455567889999999999999999999998854 252 688888752 11 11111
Q ss_pred hhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC-CCCCcCCCCHHHH
Q 007156 416 PWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQSECTAEEA 483 (615)
Q Consensus 416 ~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPts~aEctpedA 483 (615)
.+--..-+..+|.++++. .|++|-... .+.++++.++.|. +..+++=+| +|. ++..+.|
T Consensus 196 ~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 196 EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 110000012468888875 999997664 5799999998884 567888888 454 3445444
No 24
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.75 E-value=0.16 Score=53.63 Aligned_cols=121 Identities=21% Similarity=0.338 Sum_probs=71.6
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
.++.+++.+++--+-+..+ ++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| ..
T Consensus 145 ~~~~s~a~~av~~a~~~~~-~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~ 205 (404)
T 1gpj_A 145 EGAVSIGSAAVELAERELG-SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AV 205 (404)
T ss_dssp CSCCSHHHHHHHHHHHHHS-CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HH
T ss_pred CCCccHHHHHHHHHHHHhc-cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HH
Confidence 4555555554432222222 57899999999999999998888643 63 589998874 111 11
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHH--HH-ccCCCcEEEecCCCC
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEA--MA-SLNEKPIIFSLSNPT 473 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Fteevv~~--Ma-~~~erPIIFaLSNPt 473 (615)
...+.+--+.-+..++.+.++. .|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 206 ~la~~~g~~~~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 206 ELARDLGGEAVRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HHHHHHTCEECCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred HHHHHcCCceecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 1111221111122468888864 99999877654 3568888887 43 222334555566553
No 25
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.74 E-value=0.16 Score=55.33 Aligned_cols=134 Identities=17% Similarity=0.166 Sum_probs=91.1
Q ss_pred cchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 333 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 333 GTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
-||-=+.-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+.
T Consensus 217 aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~ 283 (456)
T 3r3j_A 217 ATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTK 283 (456)
T ss_dssp HHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCH
T ss_pred ccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCH
Confidence 456666677778888889999999999999999999999998764 52 3345889999888754 2322
Q ss_pred cch---------------hhccccCCCC--CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CCC
Q 007156 413 FKK---------------PWAHEHEPVK--ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 474 (615)
Q Consensus 413 ~k~---------------~fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pts 474 (615)
.+. .|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+.+ |.-++|.--+| |++
T Consensus 284 ~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T 360 (456)
T 3r3j_A 284 EQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH 360 (456)
T ss_dssp HHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC
T ss_pred HHHHHHHHHHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC
Confidence 111 1211000000 0011 23468999998887 67999999999843 25689999998 653
Q ss_pred cCCCCHHHHhc
Q 007156 475 QSECTAEEAYT 485 (615)
Q Consensus 475 ~aEctpedA~~ 485 (615)
+| +++.+.
T Consensus 361 -~e--A~~iL~ 368 (456)
T 3r3j_A 361 -IK--ALHKLK 368 (456)
T ss_dssp -TT--HHHHHH
T ss_pred -HH--HHHHHH
Confidence 44 455554
No 26
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.72 E-value=0.086 Score=57.68 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCccccCCccCccc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~-lvD~~GLi~~~R~~~L~~ 412 (615)
||--+.-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+.
T Consensus 231 Tg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~ 296 (470)
T 2bma_A 231 TGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTH 296 (470)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCH
T ss_pred chHHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCH
Confidence 55555667777888889999999999999999999999999653 52 444 888888887654 2311
Q ss_pred c--------c-------hhhcccc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 413 F--------K-------KPWAHEH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 413 ~--------k-------~~fA~~~---~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
. + ..|+... +...+ .+.. .++.||||=+.. ++.+|++-++.+-+ |.-.+|.--+| |+
T Consensus 297 edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 297 ENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHHHHHHHHHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHHHHHHHHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 1 1222110 00000 1222 568999998885 66999999999854 46779998998 55
No 27
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.55 E-value=0.035 Score=57.14 Aligned_cols=91 Identities=16% Similarity=0.258 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc
Q 007156 335 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 413 (615)
Q Consensus 335 AaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~ 413 (615)
.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+++++++
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----g-------AtVtv~h~~-------------- 193 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----G-------ATVSVCHIK-------------- 193 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC--------------
Confidence 4578888999999999999999999999976 899999998752 4 257888752
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEec
Q 007156 414 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 469 (615)
Q Consensus 414 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL 469 (615)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+
T Consensus 194 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDV 231 (285)
T 3p2o_A 194 ----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDV 231 (285)
T ss_dssp ----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEEC
T ss_pred ----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEe
Confidence 1368899987 99999999999999999884 34455544
No 28
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.51 E-value=0.067 Score=53.52 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=65.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
..||.|+|+|.-|.++|..+... |.. ..+|+++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988753 642 2478998874 1 1232222222 11112578899986
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCcEEEecCCCCC
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPTS 474 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNPts 474 (615)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 88877 44444 4568888888764 56668888888774
No 29
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.41 E-value=0.031 Score=57.59 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=74.0
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | ..+++++++
T Consensus 138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------- 192 (288)
T 1b0a_A 138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------- 192 (288)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS-------------
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-------------
Confidence 34567788999999999999999999999995 699999888642 3 468888642
Q ss_pred cchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 413 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 413 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-
T Consensus 193 -----------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi 232 (288)
T 1b0a_A 193 -----------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGI 232 (288)
T ss_dssp -----------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCC
T ss_pred -----------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccC
Confidence 0468899987 99999999999999998873 3345555543
No 30
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.41 E-value=0.036 Score=56.79 Aligned_cols=81 Identities=15% Similarity=0.289 Sum_probs=66.8
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.+|... | ..+++++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------- 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------- 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-------------
Confidence 34567788999999998 9999999999985 899999998752 4 357888752
Q ss_pred cchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHH
Q 007156 413 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVV 454 (615)
Q Consensus 413 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv 454 (615)
..+|.+.++. +|++|...+.++.+++++|
T Consensus 184 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 -----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp -----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred -----------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1468899997 9999999999989998886
No 31
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.29 E-value=0.046 Score=56.30 Aligned_cols=83 Identities=16% Similarity=0.261 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc
Q 007156 335 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 413 (615)
Q Consensus 335 AaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~ 413 (615)
--+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+++++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----g-------AtVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----G-------CTVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----T-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC--------------
Confidence 3567788899999999999999999999875 899999998752 4 357777652
Q ss_pred chhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 007156 414 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 455 (615)
Q Consensus 414 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~ 455 (615)
..+|.+.++. +|++|+..+.++.++.|+|+
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK 224 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899987 99999999999999998884
No 32
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.23 E-value=0.11 Score=54.76 Aligned_cols=112 Identities=20% Similarity=0.271 Sum_probs=76.7
Q ss_pred chHHHHHHHHHHHHHhCC-CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 334 TASVVLAGLISAMKFLGG-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~-~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
||--+.-++-.+++..|. .|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| .+
T Consensus 153 Tg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~----~~ 212 (355)
T 1c1d_A 153 TAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER----VA 212 (355)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH----HH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH----HH
Confidence 555666677788888898 8999999999999999999998754 363 67788874 111 11
Q ss_pred cchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CCC
Q 007156 413 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 474 (615)
Q Consensus 413 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pts 474 (615)
+.+.|- ...-++.|..+ ++.|+|+=+ +.++.++++.++.| .-.+|.=-+| |+.
T Consensus 213 ~a~~~g---a~~v~~~ell~-~~~DIliP~-A~~~~I~~~~~~~l----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 213 HAVALG---HTAVALEDVLS-TPCDVFAPC-AMGGVITTEVARTL----DCSVVAGAANNVIA 266 (355)
T ss_dssp HHHHTT---CEECCGGGGGG-CCCSEEEEC-SCSCCBCHHHHHHC----CCSEECCSCTTCBC
T ss_pred HHHhcC---CEEeChHHhhc-CccceecHh-HHHhhcCHHHHhhC----CCCEEEECCCCCCC
Confidence 222221 01113334333 578999954 45679999999998 3568887887 653
No 33
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.22 E-value=0.029 Score=58.42 Aligned_cols=101 Identities=20% Similarity=0.275 Sum_probs=70.3
Q ss_pred hCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC---C
Q 007156 349 LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---V 424 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~---~ 424 (615)
.|.++...++|++|+|. .|.-+|.++... | .+++++|++..-...|...+... ++.... .
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ra~~la~~----~~~~t~~~~t 234 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTRGESLKLN----KHHVEDLGEY 234 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEESCCCSSCC----CCEEEEEEEC
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhHHHHHhhh----cccccccccc
Confidence 68899999999999996 598888888642 4 36999999765555554333311 111100 1
Q ss_pred --CCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 425 --KELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 425 --~~L~e~V~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.+|.++++. +|++|+..+.++. ++.|+|+ +.-+|+-++.|-
T Consensus 235 ~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 235 SEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred cHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 469999998 9999999998887 8988873 234555555543
No 34
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.05 E-value=0.05 Score=56.36 Aligned_cols=92 Identities=24% Similarity=0.329 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc
Q 007156 335 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 413 (615)
Q Consensus 335 AaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~ 413 (615)
--+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+++++++ .
T Consensus 145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~-------T------ 199 (300)
T 4a26_A 145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG-------T------ 199 (300)
T ss_dssp CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------S------
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------C------
Confidence 4577788999999999999999999999876 899999998752 4 358888762 1
Q ss_pred chhhccccCCCCCHH--HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007156 414 KKPWAHEHEPVKELV--DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 414 k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 470 (615)
.+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 -----------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 -----------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp -----------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred -----------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88887 99999999999999998873 444555543
No 35
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.03 E-value=0.067 Score=57.72 Aligned_cols=122 Identities=17% Similarity=0.141 Sum_probs=80.5
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCccccCCccC---
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLES--- 409 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~-lvD~~GLi~~~R~~~--- 409 (615)
||-=+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++...=+
T Consensus 189 Tg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~G-------akVVavsD~~G~i~dp~GlD~~~ 256 (421)
T 1v9l_A 189 TGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MG-------AKVIAVSDINGVAYRKEGLNVEL 256 (421)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEECSSCEEECTTCCCTHH
T ss_pred hHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEECCCcEEECCCCCCHHH
Confidence 4445555667778888999999999999999999999988864 35 3455 899999998764211
Q ss_pred ccccchhhcc-------cc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 410 LQHFKKPWAH-------EH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 410 L~~~k~~fA~-------~~---~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
|..++...-. .. ....+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 257 l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 257 IQKNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp HHHTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred HHHHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 2222221110 00 11101122 34468899997765 668888877766 4678888888 55
No 36
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.02 E-value=0.041 Score=56.93 Aligned_cols=91 Identities=22% Similarity=0.314 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 418 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA 418 (615)
-.|++.+++..|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 35778888888899999999999999888777777754 364 6899998852 11111111111221
Q ss_pred c---------ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 419 H---------EHEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 419 ~---------~~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
. +-++..+|.++++. +|++|-++..|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 1 01111235666765 99999777654
No 37
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.96 E-value=0.018 Score=51.28 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=51.3
Q ss_pred cchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 333 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 333 GTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
|-.+|+.+++-.+-+.. +.||+|+|+|..|..++..+.. .|. + ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33455555554333332 7899999999999888776643 242 4 8888874 111 222
Q ss_pred cchhhccccCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 413 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 413 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
+.+.+.-+.....++.++++. .|++|=+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 222221111124578888876 88888766543
No 38
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.95 E-value=0.025 Score=57.39 Aligned_cols=85 Identities=21% Similarity=0.289 Sum_probs=55.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|+++++. .++.+.+.. .+..
T Consensus 102 ~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~~ 163 (277)
T 3don_A 102 IGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NINK 163 (277)
T ss_dssp HHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCEE
T ss_pred HHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hccc
Confidence 4677778888889999999999999888888877764 364 578998885 222222221 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 420 EHEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 420 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
....++.++++. +|++|-++..|
T Consensus 164 --~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 164 --INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp --ECHHHHHHTGGG--CSEEEECCC--
T ss_pred --ccHhhHHHHhcC--CCEEEECccCC
Confidence 112345565655 89999776654
No 39
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.95 E-value=0.044 Score=56.64 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
.|++.+++..|.++++.+++++|||.+|.+|+..|.. .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888899999999999999888888877764 364 689999884 2211112222222211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEEccCCC
Q 007156 420 E------HEPVKEL---VDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 420 ~------~~~~~~L---~e~V~~vkPtvLIG~S~~~ 446 (615)
. ..+..++ .+.++. .|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566765 89999877655
No 40
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.62 E-value=0.038 Score=56.12 Aligned_cols=87 Identities=20% Similarity=0.259 Sum_probs=55.4
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc
Q 007156 340 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 418 (615)
Q Consensus 340 Agll~Alr~~g-~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA 418 (615)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 56667776666 78889999999999988888887754 353 589999884 122 222222221
Q ss_pred cccCCC---CCHHHHHhccCCcEEEEccCCC
Q 007156 419 HEHEPV---KELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 419 ~~~~~~---~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
...... .++.++++. +|++|-+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566654 99999887755
No 41
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.37 E-value=0.085 Score=52.67 Aligned_cols=99 Identities=17% Similarity=0.380 Sum_probs=61.7
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc
Q 007156 341 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE 420 (615)
Q Consensus 341 gll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~ 420 (615)
|++.+++.. .+++ +++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|. ..|..
T Consensus 97 G~~~~l~~~--~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la---~~~~~- 154 (253)
T 3u62_A 97 GVVKSLEGV--EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALD---FPVKI- 154 (253)
T ss_dssp HHHHHTTTC--CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCC---SSCEE-
T ss_pred HHHHHHHhc--CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HHccc-
Confidence 667777543 5678 99999999999999888765 364 689999984 22222222 22211
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCcEEEecC
Q 007156 421 HEPVKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 421 ~~~~~~L~e~V~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLS 470 (615)
....++.++++. +|++|-++..+ -.+.++.+ .+..+|+-++
T Consensus 155 -~~~~~~~~~~~~--aDiVInatp~gm~p~~~~i~~~~l------~~~~~V~Div 200 (253)
T 3u62_A 155 -FSLDQLDEVVKK--AKSLFNTTSVGMKGEELPVSDDSL------KNLSLVYDVI 200 (253)
T ss_dssp -EEGGGHHHHHHT--CSEEEECSSTTTTSCCCSCCHHHH------TTCSEEEECS
T ss_pred -CCHHHHHhhhcC--CCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEee
Confidence 123467888876 99999766433 12344433 2456666654
No 42
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.34 E-value=0.094 Score=53.88 Aligned_cols=97 Identities=13% Similarity=0.270 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~ 412 (615)
-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.+|.. .|. ...+++++++
T Consensus 137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------- 193 (281)
T 2c2x_A 137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------- 193 (281)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT-------------
T ss_pred CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc-------------
Confidence 34566777888889999999999999999996 58888888753 210 2467877542
Q ss_pred cchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 413 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 413 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 -----------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred -----------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999984 34567666654
No 43
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.34 E-value=0.099 Score=52.03 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=57.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchh-------hccc--------
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE-------- 420 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~-------fA~~-------- 420 (615)
.||.|+|+|..|.+||..+... |. +++++|++- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998753 53 788898741 1 12211111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHccCCCcEEEecCCCCCc
Q 007156 421 -------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQ 475 (615)
Q Consensus 421 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPts~ 475 (615)
.....++.|+++. .|++|=+ .... ...+++.+.+.+....-.|+ .||-.+.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123578888876 8988843 3221 14566777776655444444 3444433
No 44
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.18 E-value=0.22 Score=53.66 Aligned_cols=122 Identities=14% Similarity=0.123 Sum_probs=71.8
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC-----CccccCCcc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK-----GLIVSSRLE 408 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~-----GLi~~~R~~ 408 (615)
||-=+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++...=
T Consensus 191 Tg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~Gl 259 (421)
T 2yfq_A 191 TGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNENGI 259 (421)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSSCC
T ss_pred hHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCCCC
Confidence 5555555677788889999999999999999999999999875 353 334489999 999976531
Q ss_pred CccccchhhccccCCCC--------CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 409 SLQHFKKPWAHEHEPVK--------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 409 ~L~~~k~~fA~~~~~~~--------~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
++...+ .+......+. +-.+ +-.++.||||=+.. ++.+|++-.+.+ .-.+|.-=+| |+
T Consensus 260 d~~~l~-~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 260 DFKELL-AYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp CHHHHH-HHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred CHHHHH-HHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 121111 1111111100 1112 23356777776654 457777776665 4556666666 44
No 45
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.15 E-value=0.28 Score=53.68 Aligned_cols=109 Identities=14% Similarity=0.234 Sum_probs=80.5
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCC
Q 007156 347 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKE 426 (615)
Q Consensus 347 r~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~ 426 (615)
+..+..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. + .+......+ ...+
T Consensus 249 r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~--~~~a~~~g~-----~~~~ 305 (479)
T 1v8b_A 249 RATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----C--AIQAVMEGF-----NVVT 305 (479)
T ss_dssp HHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----H--HHHHHTTTC-----EECC
T ss_pred hccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----h--HHHHHHcCC-----EecC
Confidence 5678899999999999999999999998643 53 6888887521 0 011011111 1247
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhc
Q 007156 427 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 485 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~ 485 (615)
|.|+++. .|++|.+....++++++.++.|. +.-||.=.+.-. .|+.-++..+
T Consensus 306 l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 306 LDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 9999986 99999998778899999999885 567888777654 6777777666
No 46
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.08 E-value=0.57 Score=50.98 Aligned_cols=123 Identities=17% Similarity=0.187 Sum_probs=82.6
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCc-cc
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QH 412 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L-~~ 412 (615)
||-=+.-++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++
T Consensus 209 Tg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~ 275 (449)
T 1bgv_A 209 TGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTE 275 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSH
T ss_pred hhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCH
Confidence 45555556777788889999999999999999999999888764 53 3344789998888753 23 11
Q ss_pred --------cc-------hhhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 413 --------FK-------KPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 413 --------~k-------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
++ ..|+.. .+... -.+ +-.++.|+|+=+.. ++.+|++-++.+.+ |.-.+|.-=+| |+
T Consensus 276 edi~~l~~~k~~~~g~v~~y~~~~~a~~i~-~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 276 EKINYMLEMRASGRNKVQDYADKFGVQFFP-GEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHHHHHHHHCCCCTHHHHHHHTCEEEE-TCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHHHHHHHHhccCCChhhcccccCCEEeC-chh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 11 111110 00000 001 22568999997775 66999999999864 34578888888 65
No 47
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.05 E-value=0.45 Score=51.25 Aligned_cols=124 Identities=21% Similarity=0.156 Sum_probs=82.0
Q ss_pred chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccC---c
Q 007156 334 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---L 410 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~---L 410 (615)
||-=+.-++-.+++..|.+++..||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++...=+ |
T Consensus 188 Tg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~Gld~~~l 257 (415)
T 2tmg_A 188 TGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEGFDVEEL 257 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCCCCHHHH
Confidence 5555555677778889999999999999999999999998865 0252 3344899999998764211 2
Q ss_pred cccchhhcc--c--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 411 QHFKKPWAH--E--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 411 ~~~k~~fA~--~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
..++...-+ + ....-+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 258 ~~~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 258 IRYKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHHHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HHHHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 222221100 0 000012334 45678999997776 568888888776 4568887777 55
No 48
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.98 E-value=0.12 Score=52.00 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=72.3
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCC
Q 007156 346 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 425 (615)
Q Consensus 346 lr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~ 425 (615)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 3456889999999999999999999998864 252 688888741 11 11111000110 0124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHH
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 483 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA 483 (615)
+|.|+++. .|++|-.... +.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 9999977664 699999888774 567888887522 34445444
No 49
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.49 E-value=0.12 Score=54.38 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=71.7
Q ss_pred chHHHHHHHHHHHHHh-CC-CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 334 TASVVLAGLISAMKFL-GG-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 334 TAaVvLAgll~Alr~~-g~-~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
||--+.-++..+++.. |. +|++.+|+|.|+|..|..+|+.+.+ .|. ++++.|++ . +.+.
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~------~-~~l~ 210 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN------K-AAVS 210 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------H-HHHH
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC------H-HHHH
Confidence 4444444555666664 76 8999999999999999999999865 363 57788863 1 1233
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
++.+.|--+ .-++.+.. ..+.|++|=++ ..++++++.++.| .-.+|.--+| |+
T Consensus 211 ~~a~~~ga~---~v~~~~ll-~~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 211 AAVAEEGAD---AVAPNAIY-GVTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp HHHHHHCCE---ECCGGGTT-TCCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred HHHHHcCCE---EEChHHHh-ccCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 333332111 11222322 25789999654 5669999888887 3467776666 54
No 50
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.32 E-value=0.17 Score=52.45 Aligned_cols=96 Identities=20% Similarity=0.294 Sum_probs=63.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc----CCCCCHH
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELV 428 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~ 428 (615)
+...+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888754 35 2 68999874 122 222222333210 1113466
Q ss_pred HHHhccCCcEEEEccCCCCC-----CCHHHHHHHHccCCCcEEEecCCC
Q 007156 429 DAVNAIKPTILIGTSGQGRT-----FTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~-----Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
+.++ +.|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999998876542 5888888884 45577777754
No 51
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.18 E-value=0.18 Score=54.93 Aligned_cols=128 Identities=21% Similarity=0.364 Sum_probs=71.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCC-----CCCHHHH
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEP-----VKELVDA 430 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~-----~~~L~e~ 430 (615)
||+|+||||.|. +..|+..+....-++.. -..|+|+|.+ .+|-+.....-+..+.. ..+ ..++.||
T Consensus 2 KI~iIGaGs~~~--t~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eA 73 (477)
T 3u95_A 2 KISIVGAGSVRF--ALQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDEA 73 (477)
T ss_dssp EEEEETTTSHHH--HHHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHH
T ss_pred EEEEECCCchhh--HHHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 899999999763 33333333221122110 1479999985 22311000011111111 111 2589999
Q ss_pred HhccCCcEEEEccC-------------------------------------CCC---CCC--------HHHHHHHHccCC
Q 007156 431 VNAIKPTILIGTSG-------------------------------------QGR---TFT--------KEVVEAMASLNE 462 (615)
Q Consensus 431 V~~vkPtvLIG~S~-------------------------------------~~g---~Ft--------eevv~~Ma~~~e 462 (615)
+++ +|+.|=..+ .+| +|- .|+++.|.++|.
T Consensus 74 l~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P 151 (477)
T 3u95_A 74 IEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAP 151 (477)
T ss_dssp HTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCT
T ss_pred hCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCC
Confidence 997 998884332 112 222 589999999999
Q ss_pred CcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCC
Q 007156 463 KPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGS 497 (615)
Q Consensus 463 rPIIFaLSNPts~aEctpedA~~wT~GraifASGS 497 (615)
.-+++=.|||. .-+|- -+.++++=++|=-+-|
T Consensus 152 ~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~ 183 (477)
T 3u95_A 152 KAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHG 183 (477)
T ss_dssp TCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCG
T ss_pred CeEEEEecChH--HHHHH-HHHHhCCCCeEEECCC
Confidence 99999999998 44442 2344454444433333
No 52
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.07 E-value=0.27 Score=50.53 Aligned_cols=123 Identities=15% Similarity=0.206 Sum_probs=70.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchh-------hccc-------
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE------- 420 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~-------fA~~------- 420 (615)
-.||.|+|+|.-|.+||..++.+ |. +++++|++- +.+...+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~-------~~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP-------RQITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH-------HHHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998763 64 688888741 111111100 0000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcE
Q 007156 421 --------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 491 (615)
Q Consensus 421 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~Gra 491 (615)
.....++.|+++. .|++| .+.+.. .+.+++.+.+.++...-.|++ ||=.+ ..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0113589999986 88877 333332 245677777877665444554 44222 45555555443221
Q ss_pred EEeeCCCCCCcc
Q 007156 492 IFASGSPFDPFE 503 (615)
Q Consensus 492 ifASGSPF~pV~ 503 (615)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 233345777764
No 53
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.05 E-value=0.2 Score=51.57 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=67.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCC---CCHHHHHh
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVDAVN 432 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~e~V~ 432 (615)
.||.|+|||+.|.++|.+|+.. |+ -+++|+|.+-=..+.-..++.+.. .+....... .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999998763 54 149999986211100000111111 111111112 57888888
Q ss_pred ccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCcEEEecCCCCCc
Q 007156 433 AIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 475 (615)
Q Consensus 433 ~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPts~ 475 (615)
. .|++|=+.+.+ |. .-+++.+.|.+++..-+|+=-|||..-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 6 89988665433 32 146888889999988888888999843
No 54
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.03 E-value=0.33 Score=49.66 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=66.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC---CCCHHHHHh
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 432 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e~V~ 432 (615)
||+|+|| |..|..++.+|+. .|+ ...++++|.+-. .+...+|.+...+ . +... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 367999998751 1110123222111 0 0011 136888998
Q ss_pred ccCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 433 AIKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
. .|++|=+.+.+. ...+++++.|.+++...+|+=.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 899885554442 23567888888889888888899998
No 55
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.99 E-value=0.076 Score=53.18 Aligned_cols=116 Identities=20% Similarity=0.184 Sum_probs=70.8
Q ss_pred HHHhhhcCCCCCceeeeeecCCCCccccc------cCcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc------
Q 007156 264 SLYTALGGIRPSACLPVTIDVGTNNEKLL------DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI------ 331 (615)
Q Consensus 264 ~LYta~gGI~P~~~LPI~LDvGTnne~LL------~Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli------ 331 (615)
..|..+ ||| ..-+.+|+. .++|. +++-+.|++---.-.++-..++|+.-...+..=.-+.++
T Consensus 32 ~~~~~~-gi~---~~y~~~~~~--~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~~~~a~~igavnt~~~~~g~l 105 (287)
T 1nvt_A 32 AAFKDK-GLN---YVYVAFDVL--PENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKA 105 (287)
T ss_dssp HHHHHT-TCC---EEEEEEECC--GGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEECHHHHHHTCCCEEEEETTEE
T ss_pred HHHHHc-CCC---cEEEEEEcC--HHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhcCHHHHHhCceeeEEeeCCEE
Confidence 356666 798 777888874 34442 233346776554334444444443222222211123322
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.|+-. ...|++.+++..+.++++.+++|+|||.+|.++|..|.+ .| +++++|++
T Consensus 106 ~g~nT-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 106 IGYNT-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp EEECC-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred EEecC-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 45222 778999999988889999999999999777777666643 12 78888874
No 56
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.92 E-value=0.32 Score=53.40 Aligned_cols=100 Identities=17% Similarity=0.273 Sum_probs=73.5
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCC
Q 007156 346 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 425 (615)
Q Consensus 346 lr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~ 425 (615)
.+.+|..+...+++|+|.|..|.++|+.+.. .| -+++.+|++.. + .+... ...-...
T Consensus 268 ~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G-------~~V~v~d~~~~----~--~~~a~-----~~G~~~~ 324 (494)
T 3d64_A 268 KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LG-------ATVWVTEIDPI----C--ALQAA-----MEGYRVV 324 (494)
T ss_dssp HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEECSCHH----H--HHHHH-----TTTCEEC
T ss_pred hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CC-------CEEEEEeCChH----h--HHHHH-----HcCCEeC
Confidence 3568899999999999999999999998853 25 36888887521 0 01100 0111124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
+|.|+++. .|+++......++++++.++.|. +.-||.=.+...
T Consensus 325 ~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 325 TMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp CHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred CHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 79999986 99999998778899999999995 566888777754
No 57
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.91 E-value=0.16 Score=51.82 Aligned_cols=104 Identities=19% Similarity=0.314 Sum_probs=65.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++. .+|...|. ..+.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 6888899888999999999999999998888887765 364 689999874 22211121 1111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC---C----CCCHHHHHHHHccCCCcEEEecC-CCC
Q 007156 420 EHEPVKELVDAVNAIKPTILIGTSGQG---R----TFTKEVVEAMASLNEKPIIFSLS-NPT 473 (615)
Q Consensus 420 ~~~~~~~L~e~V~~vkPtvLIG~S~~~---g----~Fteevv~~Ma~~~erPIIFaLS-NPt 473 (615)
..++.+.-+ +++|++|-++..| . .+..+.+ .+..+||=+. ||.
T Consensus 168 ----~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l------~~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 ----VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVV------AKFSSAVDLIYNPV 218 (282)
T ss_dssp ----EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHH------TTCSEEEESCCSSS
T ss_pred ----cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHc------CCCCEEEEEeeCCC
Confidence 012333222 3799999877644 1 1344443 2456777654 553
No 58
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.79 E-value=0.2 Score=49.92 Aligned_cols=84 Identities=19% Similarity=0.372 Sum_probs=55.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
.|++.+++..|..+++.+++|+|+|.+|.++|..|... | . +++++|+. .++ .......+-
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g------~-~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----G------A-KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----T------C-EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----C------C-EEEEEECC----HHH---HHHHHHHcC-
Confidence 37777777778889999999999999999999888653 4 2 78888874 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 420 EHEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 420 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0011256677765 99999776644
No 59
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.77 E-value=0.16 Score=51.43 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=71.6
Q ss_pred HHHhhhcCCCCCceeeeeecCCCC-cccccc---CcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc---cc---
Q 007156 264 SLYTALGGIRPSACLPVTIDVGTN-NEKLLD---DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI---QG--- 333 (615)
Q Consensus 264 ~LYta~gGI~P~~~LPI~LDvGTn-ne~LL~---Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli---QG--- 333 (615)
..|.++ |+| ..-+.+|+..+ -++.++ .+-+.|++--=--.++-..++|+.-...+.-=--|+++ .|
T Consensus 29 ~~f~~~-gl~---~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~ 104 (281)
T 3o8q_A 29 LFARQT-QQS---MIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEIL 104 (281)
T ss_dssp HHHHHT-TCC---EEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEE
T ss_pred HHHHHc-CCC---cEEEEeecCHHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEE
Confidence 455555 787 55555666422 122222 23346666544444555666655433333221123333 12
Q ss_pred ---chHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 334 ---TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 334 ---TAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
|- -.|++.+++..|.++++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 105 G~NTD---~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 105 GDNTD---GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp EECCH---HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred EEecH---HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 43 46788888888999999999999999888888777754 354 689999884
No 60
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.73 E-value=0.14 Score=51.69 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=62.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc---cchhhccccCC--CCCHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH---FKKPWAHEHEP--VKELVDA 430 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~---~k~~fA~~~~~--~~~L~e~ 430 (615)
.||.|+|||+.|..+|..|+.. |+ ..+++++|++- ++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11111110 00011100001 1355 66
Q ss_pred HhccCCcEEEEccCCC-------CCC-----------CHHHHHHHHccCCCcEEEecCCCCC
Q 007156 431 VNAIKPTILIGTSGQG-------RTF-----------TKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~-------g~F-----------teevv~~Ma~~~erPIIFaLSNPts 474 (615)
++. .|++|=+...+ |.. -+++++.|.+++...+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 664 89887554432 211 1588888988888888888999984
No 61
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.58 E-value=0.16 Score=49.40 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=62.1
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc--ccCCccCcc-ccchhhccc--cCC
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQ-HFKKPWAHE--HEP 423 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi--~~~R~~~L~-~~k~~fA~~--~~~ 423 (615)
...++...||.|+|+|..|.++|..|... | -+++++|++--- .+.....+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999998753 5 368888875211 000000000 001222222 112
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH-HccCCCcEEEecCCCC
Q 007156 424 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPT 473 (615)
Q Consensus 424 ~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~M-a~~~erPIIFaLSNPt 473 (615)
..++.|+++. +|++| ++.... ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999987 88887 444332 345666666 4333667999999974
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.42 E-value=0.18 Score=50.94 Aligned_cols=119 Identities=18% Similarity=0.095 Sum_probs=70.5
Q ss_pred HHhhhcCCCCCceeeeeecCCCC-cccccc---CcccccccccCCChhhHHHHHHHHHHHHHHHhCccccc------ccc
Q 007156 265 LYTALGGIRPSACLPVTIDVGTN-NEKLLD---DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILI------QGT 334 (615)
Q Consensus 265 LYta~gGI~P~~~LPI~LDvGTn-ne~LL~---Dp~YlGlr~~Ri~g~ey~~~vdeFv~Av~~~~gp~vli------QGT 334 (615)
.|.++ |+| ..-+.+|+..+ -++.++ .+-+.|++--=--.++-..++|+.-...+.-=--|+++ .|.
T Consensus 24 ~f~~~-gl~---~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~ 99 (272)
T 3pwz_A 24 FAQAS-NQQ---LEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAE 99 (272)
T ss_dssp HHHHT-TCC---EEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEE
T ss_pred HHHHc-CCC---cEEEEEEcCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEe
Confidence 44444 777 55555565422 122232 33346766544445556666655433333211123322 232
Q ss_pred hHHHHHHHHHH-HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 335 ASVVLAGLISA-MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 335 AaVvLAgll~A-lr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-.= -.|++.+ ++..|.++++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 100 NTD-~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 100 NFD-GIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp CCH-HHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred cCC-HHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 222 3578888 8878889999999999999888888777754 364 689998884
No 63
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.39 E-value=0.34 Score=53.43 Aligned_cols=113 Identities=24% Similarity=0.269 Sum_probs=75.1
Q ss_pred HHHHhCC--CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccC---ccccchhhcc
Q 007156 345 AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---LQHFKKPWAH 419 (615)
Q Consensus 345 Alr~~g~--~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~---L~~~k~~fA~ 419 (615)
+++..|. .|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++...=+ |..++.....
T Consensus 232 ~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~ 300 (501)
T 3mw9_A 232 YMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPDGIDPKELEDFKLQHGT 300 (501)
T ss_dssp HHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHHHHSS
T ss_pred HHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCCCCCHHHHHHHHHhcCC
Confidence 3445675 48999999999999999999999753 53 4566899999999764211 2222222110
Q ss_pred c--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007156 420 E--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 473 (615)
Q Consensus 420 ~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 473 (615)
- -+....+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 301 i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 301 ILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp STTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred eecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 0 0000000112445789999988875 69999988877 4789999998 43
No 64
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.28 E-value=0.53 Score=50.53 Aligned_cols=59 Identities=34% Similarity=0.365 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHHHhCCC-CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-ccCCccc
Q 007156 334 TASVVLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV-DSKGLIV 403 (615)
Q Consensus 334 TAaVvLAgll~Alr~~g~~-L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lv-D~~GLi~ 403 (615)
||--+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++
T Consensus 190 Tg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 190 TARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred hhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 5555556777788889999 9999999999999999999988641 253 45444 8877544
No 65
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.00 E-value=0.27 Score=49.72 Aligned_cols=48 Identities=33% Similarity=0.440 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
.|++.+++..|.+++..|+|++|||-|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4677888888999999999999999999998877754 354 78999987
No 66
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.76 E-value=0.17 Score=51.92 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=67.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC--Ccc--ccCCccCccccchhhccccCCCCCHHHH
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK--GLI--VSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~--GLi--~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ ..- ..+...+|.+.-.++..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 243111112479999975 100 0000001222111222222222578999
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 431 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
++. .|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8988866554421 2567888999986 777777789998
No 67
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.57 E-value=0.075 Score=53.96 Aligned_cols=123 Identities=20% Similarity=0.286 Sum_probs=68.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC-CCCCHHHHHhccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~-~~~~L~e~V~~vk 435 (615)
||.|+|||+.|.++|..+.. .|+ ...++++|.+---......++.+.. +|..... ...+. ++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~~-~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGGH-SELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEECG-GGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECCH-HHhCC--
Confidence 89999999999999987754 254 2479999986210000000111111 1111100 00233 56665
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeC
Q 007156 436 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASG 496 (615)
Q Consensus 436 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASG 496 (615)
.|++|=+.+.+.. .-+++++.|++++..-+|+-.|||.. ...+.+.+.+.-.-+|.+|
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8988865544321 12788888988888878877999983 2233344444334455554
No 68
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.53 E-value=0.26 Score=48.41 Aligned_cols=81 Identities=23% Similarity=0.412 Sum_probs=53.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
.|++.+++..|.++++ +++|+|+|.+|..+|..|.. .|. +++++|++ .++ .....+.+..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 4777888878889999 99999999999999888754 242 68888874 111 1122112211
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007156 420 EHEPVKELVDAVNAIKPTILIGTSGQG 446 (615)
Q Consensus 420 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 446 (615)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 2456666 4 489999766644
No 69
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.96 E-value=0.42 Score=48.86 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=64.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCCCCCHHHHHhcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V~~v 434 (615)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111111221 1111 0111456 66776
Q ss_pred CCcEEEEccCCC--CC-----------CCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 435 KPTILIGTSGQG--RT-----------FTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 435 kPtvLIG~S~~~--g~-----------Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
.|++|=+.+.+ |- .-+++++.|.+++..-+|+=.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89988655443 10 13578888889999999888999983
No 70
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.95 E-value=1.3 Score=48.61 Aligned_cols=108 Identities=16% Similarity=0.199 Sum_probs=75.4
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCCCC
Q 007156 347 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVK 425 (615)
Q Consensus 347 r~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~ 425 (615)
|..+..+.+.+|+|+|+|..|.++|+.+.. .|. +++.+|++- .+ + ..|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~----~~---~-----~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP----IN---A-----LQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH----HH---H-----HHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---H-----HHHHHcCCEEe
Confidence 456778899999999999999999988754 252 688888741 11 1 11111 11124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhc
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 485 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~ 485 (615)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 99999998888899999999984 556777777754 3666555443
No 71
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.91 E-value=0.21 Score=50.60 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=64.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccC----ccccchhhccccCC---CCCHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHEP---VKELV 428 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~----L~~~k~~fA~~~~~---~~~L~ 428 (615)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++-+. +.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 2599999852 21110 1111 011110111 1456
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 429 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
++++. +|++|=+.+.+.. +.+++++.+.+++..-+|+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67765 8988865544321 24678888888888889999999974
No 72
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.85 E-value=0.41 Score=47.54 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-.|++.+++..|.++++.+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 456677777778889999999999998888888777642 4 478888874
No 73
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.82 E-value=0.32 Score=48.14 Aligned_cols=37 Identities=30% Similarity=0.409 Sum_probs=32.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.||+++|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46688999999999999999999764 75 799999987
No 74
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.82 E-value=0.26 Score=51.15 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=60.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----ccCCCCCH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKEL 427 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L 427 (615)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999988764 352 688888741 11 2111111111 01112357
Q ss_pred HHHHhccCCcEEEEccCCCC-----CCCHHHHHHHHccCCCcEEEecCCC
Q 007156 428 VDAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 999999877543 46899999885 34566666643
No 75
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=90.80 E-value=0.41 Score=51.89 Aligned_cols=106 Identities=17% Similarity=0.277 Sum_probs=67.3
Q ss_pred CCCceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc---ccCCCCCH
Q 007156 353 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---EHEPVKEL 427 (615)
Q Consensus 353 L~d~riv~~GAGsA--G~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~---~~~~~~~L 427 (615)
.+..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+ .-.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 34579999999995 78999888742 122 2 3899999851 110001110111111 00112589
Q ss_pred HHHHhccCCcEEEEccCCC---------------CCC---------------------CHHHHHHHHccCCCcEEEecCC
Q 007156 428 VDAVNAIKPTILIGTSGQG---------------RTF---------------------TKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------teevv~~Ma~~~erPIIFaLSN 471 (615)
.||++. +|.+|=.-.+| |.. -.++++.|.+++..-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999997 89887544332 221 3577788889999999999999
Q ss_pred CC
Q 007156 472 PT 473 (615)
Q Consensus 472 Pt 473 (615)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 76
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.71 E-value=1.2 Score=47.37 Aligned_cols=108 Identities=14% Similarity=0.198 Sum_probs=81.0
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
+.+|=-+++.+|+..|..|..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ..
T Consensus 96 ~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~------~~-~~ 156 (381)
T 3oet_A 96 IAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEA-----LGI-------RTLLCDPPR------AA-RG 156 (381)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHHH------HH-TT
T ss_pred chhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCh------HH-hc
Confidence 556667899999999999999999999999999999999999864 264 688888621 00 10
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEccC--------CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG--------QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~--------~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
......+|.|+++. .|+++=.-- ..++|+++.++.|. +..|+.=.|.
T Consensus 157 --------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~aR 211 (381)
T 3oet_A 157 --------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINACR 211 (381)
T ss_dssp --------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECSC
T ss_pred --------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECCC
Confidence 11223589999987 898874431 35689999999995 6778877665
No 77
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=90.62 E-value=1.3 Score=46.92 Aligned_cols=179 Identities=12% Similarity=0.128 Sum_probs=106.9
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 332 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 332 QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
+.+|=-+++.+|+..|..|..|.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|+..- . .
T Consensus 93 ~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~~------~-~- 152 (380)
T 2o4c_A 93 RGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRG-----LGW-------KVLVCDPPRQ------A-R- 152 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHHHH------H-H-
T ss_pred HHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHH-----CCC-------EEEEEcCChh------h-h-
Confidence 445556899999999999999999999999999999999998864 264 6888886310 0 0
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEcc---C-----CCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHH
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTS---G-----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 483 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA 483 (615)
. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.-.---|-.-.+|
T Consensus 153 ~-------~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sRG~vvd~~aL~~a 220 (380)
T 2o4c_A 153 E-------PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASRGAVVDNQALRRL 220 (380)
T ss_dssp S-------TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSCGGGBCHHHHHHH
T ss_pred c-------cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCCCcccCHHHHHHH
Confidence 0 01123579999986 89887542 1 34688999998884 5667776664221111111223
Q ss_pred hcccCCcEEEeeCCCC--CCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCcc
Q 007156 484 YTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQE 554 (615)
Q Consensus 484 ~~wT~GraifASGSPF--~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~~ 554 (615)
+ .+|+..-|-=-=| +| ..+.. .. + +|+++-|=++--...+ -..|...+++.+......+
T Consensus 221 L--~~g~i~~A~LDV~~~EP-~~~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~nl~~~l~g~ 281 (380)
T 2o4c_A 221 L--EGGADLEVALDVWEGEP-QADPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQAYCAWRGIA 281 (380)
T ss_dssp H--HTTCCEEEEESCCTTTT-SCCHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHHHHHHHTCC
T ss_pred H--HhCCCceEEeeeeccCC-CCchh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHHHHHHHcCC
Confidence 3 3455433311111 11 01111 11 2 4888899875322221 2345555666666655433
No 78
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.61 E-value=0.24 Score=52.01 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57789999999999999999999875 75 799999996
No 79
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.37 E-value=0.33 Score=48.31 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-.|++.+++..|..++..+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 356777777777889999999999999988888887642 4 479998884
No 80
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.27 E-value=0.57 Score=42.00 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=28.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+...+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 44567899999999999999998864 24 378999875
No 81
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.26 E-value=0.25 Score=50.97 Aligned_cols=106 Identities=17% Similarity=0.278 Sum_probs=64.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
..||.|+|||+.|..+|-+|+.. ++ ...++|+|.+-=-.++...+|.+.. +|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877542 44 2689999984100000000122221 232211000133566776
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 9999866555422 1245677778889999999999998
No 82
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.24 E-value=0.2 Score=50.83 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=63.7
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCccccCCccCccccchhhccccCC-CCCHHHHHh
Q 007156 357 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVN 432 (615)
Q Consensus 357 riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~--~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~e~V~ 432 (615)
||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 243 257999997 31000000001222111 1111000 022 56676
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 433 AIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 433 ~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
. .|++|=+.+.+ |. .++++++.|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 5 89998666544 22 4677889999999999999999998
No 83
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.21 E-value=0.14 Score=52.21 Aligned_cols=105 Identities=16% Similarity=0.261 Sum_probs=62.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCC-CCHHHHHhcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~-~~L~e~V~~v 434 (615)
.||.|+|||..|.++|..+... |+ ...|+++|.+--..+....++.+. .++....... .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 44 258999998621111100012221 1111100000 123456665
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+. ...+++++.|.+++..-++|=.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 898886554443 12357788888888887888889998
No 84
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.12 E-value=0.54 Score=49.03 Aligned_cols=114 Identities=12% Similarity=0.159 Sum_probs=68.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc
Q 007156 340 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 419 (615)
Q Consensus 340 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 419 (615)
++.+++.... +....++.|+|+|..|..++..+... .+ .++++++|+. .++ ...+.+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~------~~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LG------IEEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CC------CcEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3445554443 24568999999999999988776543 23 2689998873 222 3333333321
Q ss_pred c----cCCCCCHHHHHhccCCcEEEEccCCC---CCCCHHHHHHHHccCCCcEEEecCC--CCCcCCCCHH
Q 007156 420 E----HEPVKELVDAVNAIKPTILIGTSGQG---RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAE 481 (615)
Q Consensus 420 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Fteevv~~Ma~~~erPIIFaLSN--Pts~aEctpe 481 (615)
. .....++.|+++. .|++|=++..+ -+|..+.+ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 1 1124689999986 89998766543 13443332 23447777775 55 5677664
No 85
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.97 E-value=0.31 Score=53.32 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=75.0
Q ss_pred CceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-c--ccCC---CCC
Q 007156 355 DQRFLFLGAGEAG--TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEP---VKE 426 (615)
Q Consensus 355 d~riv~~GAGsAG--~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~--~~~~---~~~ 426 (615)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++-+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4589999999964 4456666531 121 236899999853 11111111111111 1 0111 257
Q ss_pred HHHHHhccCCcEEEEccCCC---------------CCCC-------------------------HHHHHHHHccCCCcEE
Q 007156 427 LVDAVNAIKPTILIGTSGQG---------------RTFT-------------------------KEVVEAMASLNEKPII 466 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~---------------g~Ft-------------------------eevv~~Ma~~~erPII 466 (615)
+.++++. +|++|=+.+++ |.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 99988555321 3333 6899999999999999
Q ss_pred EecCCCCCcCCCCHHHHhcccCCcEEEeeC
Q 007156 467 FSLSNPTSQSECTAEEAYTWSQGRAIFASG 496 (615)
Q Consensus 467 FaLSNPts~aEctpedA~~wT~GraifASG 496 (615)
+=.|||. . +..+-+.++. ..-+|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p-~~rviG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTV-PIKAVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHS-CSEEEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCC-CCcEEecC
Confidence 9999998 2 3334445554 34566665
No 86
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.96 E-value=0.81 Score=47.67 Aligned_cols=38 Identities=24% Similarity=0.534 Sum_probs=33.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|++.||+++|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 356789999999999999999999875 65 799999986
No 87
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.94 E-value=0.25 Score=50.84 Aligned_cols=128 Identities=15% Similarity=0.225 Sum_probs=72.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~~ 433 (615)
.||.|+|||+.|.++|.+++. .|+ -+++++|.+-=..+.-..++.+...++.... ....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999988765 254 1399999862111100001211111111110 011456 77776
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhccc--CCcEEEeeCC
Q 007156 434 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFASGS 497 (615)
Q Consensus 434 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT--~GraifASGS 497 (615)
.|++|=+.+.+ |. .-+++.+.+.+++..-+|+=-|||.+- . .+-+.+.+ .-.-+|++|.
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~--~-t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA--M-VYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH--H-HHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH--H-HHHHHHhcCCChhhEEEeCc
Confidence 89888554332 21 245778888888888777667999843 2 33344333 2334666665
Q ss_pred CCC
Q 007156 498 PFD 500 (615)
Q Consensus 498 PF~ 500 (615)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 88
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.86 E-value=0.32 Score=50.01 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=71.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC--CCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE--PVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~--~~~~L~e~V~~ 433 (615)
.||.|+|||+.|.++|.+++. .|+- +++|+|.+-=..++-...+.+...+...... ...++ ++++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 72 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG 72 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC
Confidence 489999999999999988875 2541 3999997511000000012211111111100 11456 77776
Q ss_pred cCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhccc--CCcEE
Q 007156 434 IKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAI 492 (615)
Q Consensus 434 vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT--~Grai 492 (615)
.|++|=+.+.+ |. +-+++.+.|.+++..-+|+=.|||.... .+-+.+.+ .-.-+
T Consensus 73 --aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~---t~~~~~~~g~~~~rv 147 (322)
T 1t2d_A 73 --ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM---VQLLHQHSGVPKNKI 147 (322)
T ss_dssp --CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH---HHHHHHHHCCCGGGE
T ss_pred --CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH---HHHHHHhcCCChHHE
Confidence 89988654333 21 3567888888889888877679998432 33344433 22345
Q ss_pred EeeCC
Q 007156 493 FASGS 497 (615)
Q Consensus 493 fASGS 497 (615)
|++|.
T Consensus 148 iG~gt 152 (322)
T 1t2d_A 148 IGLGG 152 (322)
T ss_dssp EECCH
T ss_pred EeccC
Confidence 55553
No 89
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.76 E-value=0.31 Score=50.06 Aligned_cols=105 Identities=14% Similarity=0.229 Sum_probs=63.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|||+.|..+|-+|+.. ++ ...|+|+|.+-=-.++-..+|.+.. +|.++..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988877543 44 2689999984100000001132221 232211000133566776
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 436 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 436 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8998865554421 1245677778899999999999998
No 90
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.48 E-value=0.41 Score=41.01 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=52.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHh
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 432 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 432 (615)
++..+|+|+|+|..|..+++.+.. .| .+++++|++- ++.+.+......+.. .+..+. +.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~--~d~~~~-~~l~ 64 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVI--ANATEE-NELL 64 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEE--CCTTCH-HHHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEE--eCCCCH-HHHH
Confidence 456789999999999999988864 24 3578888742 111111111001111 111222 2222
Q ss_pred c---cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 433 A---IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 433 ~---vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
. -++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 65 ~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 65 SLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp TTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred hcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 2 2589998665532011223444444455556666666665
No 91
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.31 E-value=0.49 Score=48.37 Aligned_cols=107 Identities=14% Similarity=0.252 Sum_probs=65.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHHHh
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAVN 432 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~V~ 432 (615)
...||.|+|||..|..+|-.|+.. |+ ...++|+|.+-=..++...+|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999988876542 44 268999997520001100113222 2332 11000013356777
Q ss_pred ccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 433 AIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
. .|++|=+.+.+..- =+++++.|.+++..-+|+=.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 99988665554321 245777788889999999999998
No 92
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.29 E-value=2.6 Score=43.08 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=64.6
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. +. . ..+ .+ .-...+|.
T Consensus 136 ~~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~---~-~~~-~~---g~~~~~l~ 191 (313)
T 2ekl_A 136 EGLELAGKTIGIVGFGRIGTKVGIIANA-----MGM-------KVLAYDILD----IR---E-KAE-KI---NAKAVSLE 191 (313)
T ss_dssp CCCCCTTCEEEEESCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH---H-HHH-HT---TCEECCHH
T ss_pred CCCCCCCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch---h-HHH-hc---CceecCHH
Confidence 3678999999999999999999998864 253 688888741 11 0 000 11 01113788
Q ss_pred HHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.-- ..++++++.++.|. +..++.=.|.
T Consensus 192 ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk---~ga~lIn~ar 233 (313)
T 2ekl_A 192 ELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK---DNVIIVNTSR 233 (313)
T ss_dssp HHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC---TTEEEEESSC
T ss_pred HHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC---CCCEEEECCC
Confidence 99986 898885432 34678899998884 5668877776
No 93
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.26 E-value=0.42 Score=48.92 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC-CCCCHHHHHhcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~-~~~~L~e~V~~v 434 (615)
.||.|+|||..|..+|-+|+. .|+ ...++++|.+-=..++...+|.+.. +|.++.. ...+ .++++.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a~~~- 74 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVFKEKAIGEAMDINHGL-PFMGQMSLYAGD-YSDVKD- 74 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC---CCHHHHHHTTSC-CCTTCEEEC--C-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChHHHHHHHHHHHHhH-HhcCCeEEEECC-HHHhCC-
Confidence 589999999999998887654 244 2589999985210000001122211 1221100 0123 456665
Q ss_pred CCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+..- -+++++.|.+++..-+|+=.|||.
T Consensus 75 -aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 75 -CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp -CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 99988655544211 168889999999999999999997
No 94
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.23 E-value=0.5 Score=48.11 Aligned_cols=105 Identities=15% Similarity=0.304 Sum_probs=61.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC-CCCCHHHHHhccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~-~~~~L~e~V~~vk 435 (615)
||.|+|||+.|.++|..|+.. |. ...++++|.+---...-...+.+.. ++..... ...+ .++++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~d-~~~~~~-- 67 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDKKRAEGDALDLIHGT-PFTRRANIYAGD-YADLKG-- 67 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHHG-GGSCCCEEEECC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHHHHHhhh-hhcCCcEEEeCC-HHHhCC--
Confidence 799999999999999988653 53 2479999985100000000011100 1110000 0123 345654
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCCc
Q 007156 436 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 475 (615)
Q Consensus 436 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts~ 475 (615)
+|++|=+-..+.. .-+++++.|.+++..-+|+-.|||...
T Consensus 68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 8888755444331 126888899888887788889999843
No 95
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.21 E-value=1.9 Score=41.51 Aligned_cols=92 Identities=12% Similarity=0.230 Sum_probs=61.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~------~------g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN------T------TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS------S------SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc------C------ceEEeCCHHHHHhc-
Confidence 35899999999999999988753 420 01368888874 111 0 00112467788875
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 88777 33333 457888888876656668888888875
No 96
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.02 E-value=1.3 Score=45.03 Aligned_cols=103 Identities=15% Similarity=0.181 Sum_probs=60.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
+....+|.|+|+|..|..+++.+... .|+ ++++++|+. .++ ...+.+.+........++.|++
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~~~~~~~~~~e~v 194 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQGEVRVCSSVQEAV 194 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSSCCEECSSHHHHH
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhCCeEEeCCHHHHH
Confidence 45667999999999999999888653 243 578888873 111 2222222210011236899999
Q ss_pred hccCCcEEEEccCC-CCCCCHHHHHHHHccCCCcEEEecC--CCCCcCCCCH
Q 007156 432 NAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTA 480 (615)
Q Consensus 432 ~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erPIIFaLS--NPts~aEctp 480 (615)
+. +|++|=+... ..+|.++ ...+.-+|+.+| +|. .-|+.+
T Consensus 195 ~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 195 AG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp TT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred hc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 86 8988854332 2233332 123456788774 343 355543
No 97
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.61 E-value=0.51 Score=49.31 Aligned_cols=95 Identities=17% Similarity=0.288 Sum_probs=61.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc----cCCCCCH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKEL 427 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 427 (615)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999988754 252 688888741 11 22112112111 0112357
Q ss_pred HHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCcEEEecC
Q 007156 428 VDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLS 470 (615)
.+.++. .|++|.+.+.+ .+++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788875 89999876544 357888888884 344566555
No 98
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=88.56 E-value=0.34 Score=52.39 Aligned_cols=127 Identities=14% Similarity=0.261 Sum_probs=77.1
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc--ccC-C---CCCHH
Q 007156 356 QRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--EHE-P---VKELV 428 (615)
Q Consensus 356 ~riv~~GAGsA-G~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~--~~~-~---~~~L~ 428 (615)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- +++.+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 367999998530 0111111111122211 111 1 25788
Q ss_pred HHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 429 DAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
++++. .|++|=+.++++. .=+++++.|.++|..-+|+=.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999866665431 12588899999999999999999982
Q ss_pred cCCCCHHHHhcccCCcEEEeeC
Q 007156 475 QSECTAEEAYTWSQGRAIFASG 496 (615)
Q Consensus 475 ~aEctpedA~~wT~GraifASG 496 (615)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 3334455666443566665
No 99
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=88.50 E-value=0.33 Score=49.85 Aligned_cols=104 Identities=21% Similarity=0.299 Sum_probs=65.4
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-ccccCCCCCHHHHHhc
Q 007156 356 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-AHEHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f-A~~~~~~~~L~e~V~~ 433 (615)
.||+|+| +|..|..++..|+. .|+ ...++++|.+.- .+...+|.+...+. .+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888753 343 256999996421 00000122111000 0000011257888887
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 434 IKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 434 vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+. -.++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655442 23667888888888888999999998
No 100
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.42 E-value=0.47 Score=49.24 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=65.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+.. +|.....-..+..++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhhh-hhcCCcEEEECcHHHhcC-
Confidence 46999999999999999888753 54 2589999984110110001233322 332211001223456665
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ | +| -+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877554433 1 23 258888999999999999999998
No 101
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=88.25 E-value=0.44 Score=42.18 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 59999999999999998875 375 57788864
No 102
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.05 E-value=0.38 Score=48.11 Aligned_cols=104 Identities=16% Similarity=0.277 Sum_probs=61.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC--CCCCHHHHHh
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE--PVKELVDAVN 432 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~--~~~~L~e~V~ 432 (615)
..||.|+|||+.|..+|..|... |. ..+++++|++---.+...-++.+. ..+..+.. ...+. ++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~-~~~~ 74 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEAEVLDMQHG-SSFYPTVSIDGSDDP-EICR 74 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHHT-GGGSTTCEEEEESCG-GGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHhh-hhhcCCeEEEeCCCH-HHhC
Confidence 35899999999999999887642 53 147999998631000000001111 11111100 00132 4555
Q ss_pred ccCCcEEEEccCCCCCCCH----------------HHHHHHHccCCCcEEEecCCCCC
Q 007156 433 AIKPTILIGTSGQGRTFTK----------------EVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fte----------------evv~~Ma~~~erPIIFaLSNPts 474 (615)
. +|++|=+.+.+. ++ ++++.|++++...+|+.++||..
T Consensus 75 ~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 75 D--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 4 888875544332 23 88899988888889999999984
No 103
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.89 E-value=0.5 Score=48.44 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 578999999999999999999999876 65 799999987
No 104
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.79 E-value=0.38 Score=46.71 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=60.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 3478888631 1122221111 00112456666
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 431 VNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
++ ++|++|=+.. ... .+++++.+.... +..+|.-+||-.
T Consensus 66 ~~--~~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NP--YAKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CS--CCSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hc--CCCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 65 4888884333 323 388888887544 567888888854
No 105
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.73 E-value=3.4 Score=43.16 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=94.4
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+... . .. .+.......+|.|
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~dr~~~----~---~~-----~~~g~~~~~~l~e 223 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARG-----FGL-------AIHYHNRTRL----S---HA-----LEEGAIYHDTLDS 223 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHT-----TTC-------EEEEECSSCC----C---HH-----HHTTCEECSSHHH
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHH-----CCC-------EEEEECCCCc----c---hh-----hhcCCeEeCCHHH
Confidence 567999999999999999999999863 254 6888887531 0 00 0001111257999
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCC-CCCccc
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-FDPFEY 504 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSP-F~pV~~ 504 (615)
+++. .|+++=.-- ..++|+++.++.|. +..++.=.|.-.---|-.-.+|+ .+|+.-.| |-. |++ +-
T Consensus 224 ll~~--sDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~-EP 294 (345)
T 4g2n_A 224 LLGA--SDIFLIAAPGRPELKGFLDHDRIAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFAN-EP 294 (345)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTT-TT
T ss_pred HHhh--CCEEEEecCCCHHHHHHhCHHHHhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCC-CC
Confidence 9986 898884432 23789999999995 56788777653322222222333 34654332 211 110 00
Q ss_pred CCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 505 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 505 ~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
.....--+..|+.+-|=+|-.... --+.|...+++-|.....
T Consensus 295 -~~~~pL~~~~nvilTPHia~~t~e-----~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 295 -AIDPRYRSLDNIFLTPHIGSATHE-----TRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp -SCCTTGGGCTTEEECCSCTTCBHH-----HHHHHHHHHHHHHHHHHT
T ss_pred -CCCchHHhCCCEEEcCccCcCCHH-----HHHHHHHHHHHHHHHHHc
Confidence 001111245688888877532211 124555666666665554
No 106
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=87.69 E-value=1.9 Score=44.01 Aligned_cols=111 Identities=19% Similarity=0.179 Sum_probs=66.5
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-
Q 007156 341 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH- 419 (615)
Q Consensus 341 gll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~- 419 (615)
+.+++..... ....++.|+|+|..|-.+++.+... .+ .++++++|+. .++ ...+.+.|..
T Consensus 113 s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~~---a~~la~~~~~~ 173 (322)
T 1omo_A 113 GGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EKA---AKKFVSYCEDR 173 (322)
T ss_dssp HHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHHHT
T ss_pred HHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HHH---HHHHHHHHHhc
Confidence 3444444432 3567999999999998888877653 23 2689988873 222 3333333321
Q ss_pred --ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCcEEEecC--CCCCcCCCCHH
Q 007156 420 --EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTAE 481 (615)
Q Consensus 420 --~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLS--NPts~aEctpe 481 (615)
+.. ..++.|++ . .|++|=++..+ -.|..+.+ .+.-.|+.++ +|. +-|+.++
T Consensus 174 ~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 174 GISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred CceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899988 5 89998765532 23433322 2456888883 455 6777764
No 107
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=87.52 E-value=0.89 Score=48.64 Aligned_cols=124 Identities=13% Similarity=0.178 Sum_probs=76.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC---CCCCHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISK-QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE---PVKELVDAV 431 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~-~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~---~~~~L~e~V 431 (615)
.||.|+|||+. ++..++..+.. ..++. ...|+|+|.+- +|.+........+++... ...++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444443 23442 36899999853 221101111111111111 125788999
Q ss_pred hccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHccCCCcEEEecCCCCCcCC
Q 007156 432 NAIKPTILIGTSGQGR---------------TF-------------------TKEVVEAMASLNEKPIIFSLSNPTSQSE 477 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~erPIIFaLSNPts~aE 477 (615)
+. +|++|=..++++ ++ =.++++.|.++| .-+|+=.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 97 999998777653 22 258899999999 99999999998 2
Q ss_pred CCHHHHhcccCCcEEEeeC
Q 007156 478 CTAEEAYTWSQGRAIFASG 496 (615)
Q Consensus 478 ctpedA~~wT~GraifASG 496 (615)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 3334455666443566665
No 108
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.43 E-value=0.53 Score=53.07 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57889999999999999999999875 75 799999997
No 109
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.35 E-value=3.2 Score=42.98 Aligned_cols=91 Identities=15% Similarity=0.257 Sum_probs=63.2
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . ... + ....+|.|
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~dr~~~----~---~~g----~----~~~~~l~e 211 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PISYFSRSKK----P---NTN----Y----TYYGSVVE 211 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCC----T---TCC----S----EEESCHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCCch----h---ccC----c----eecCCHHH
Confidence 567899999999999999999998853 353 5888887421 1 111 1 01247889
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
+++. .|+++=.- ...++++++.++.|. +..+|.-.|.-
T Consensus 212 ll~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~srG 253 (333)
T 3ba1_A 212 LASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIGRG 253 (333)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECSCG
T ss_pred HHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 89887442 124688889999884 45677766653
No 110
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.25 E-value=3.2 Score=42.23 Aligned_cols=93 Identities=18% Similarity=0.228 Sum_probs=63.5
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + ..+ .+ .-...+|.|
T Consensus 137 ~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~-~~---g~~~~~l~e 192 (307)
T 1wwk_A 137 GIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NILLYDPYP----NE-E---RAK-EV---NGKFVDLET 192 (307)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH-H---HHH-HT---TCEECCHHH
T ss_pred CcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCC----Ch-h---hHh-hc---CccccCHHH
Confidence 467999999999999999999998864 253 688888741 10 0 000 11 011237889
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.-- ..++++++.++.|. +.-++.=.|.
T Consensus 193 ll~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 193 LLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 8886 898885421 34688899998885 5667777766
No 111
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.19 E-value=0.47 Score=48.40 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=64.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHHHHhcc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~~v 434 (615)
||.|+|||..|.++|..|+.. |+ ...+.|+|.+-=..++-.-+|.+....|-.+. ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 43 24799999853111100001222221121110 00134 677876
Q ss_pred CCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ |- | -+++++.|.+++..-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887554443 32 1 246778888999999999999998
No 112
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.07 E-value=0.63 Score=44.51 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=57.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~l-vD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
.||.|+|+|..|..+|..|... |. ++++ +|++ .+.+....+.+- .....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988652 53 4555 6653 112222222221 0111244566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
+|++| ++..+ ...+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 33333 456777777655 45569999999984
No 113
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=86.98 E-value=0.32 Score=49.76 Aligned_cols=104 Identities=18% Similarity=0.305 Sum_probs=62.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC-CCCHHHHHhcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~e~V~~v 434 (615)
.||.|+|||+.|..+|-+|+. .++ ...++|+|.+-=-.++-..+|.+. .+|.++..- ..+ .++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGS-YGDLEG- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECC-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECC-HHHhCC-
Confidence 389999999999998887654 243 258999998620000000112221 122211000 123 566775
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ |. .-+++++.|.+++..-+|+=.|||.
T Consensus 68 -aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 68 -ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp -EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 89888554444 31 1246777788889999999999998
No 114
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.83 E-value=0.71 Score=46.82 Aligned_cols=104 Identities=22% Similarity=0.301 Sum_probs=60.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHHHHhcc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~~v 434 (615)
||.|+|||..|.++|..+... ++ -.+++++|.+--..+....++.+....+.... ....++.+ ++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~- 69 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN- 69 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC-
Confidence 799999999999999887642 22 25799999862110000000111100010000 00134544 665
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ |- +-+++++.|++++..-+|+-.|||.
T Consensus 70 -aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 70 -SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp -CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred -CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 88887554332 21 1157778888888888888899997
No 115
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.77 E-value=1.1 Score=46.72 Aligned_cols=95 Identities=13% Similarity=0.237 Sum_probs=61.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCCCCCHHHHH
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 431 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V 431 (615)
++..||.|+|.|..|..+|..|... | -+++++|+. . +.+.. ++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~~~~~----l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---NAVQA----LEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---HHHHH----HHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---HHHHH----HHHCCCEEeCCHHHHH
Confidence 4567999999999999999988753 5 367888873 1 11211 2111 12235788888
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCC
Q 007156 432 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNP 472 (615)
Q Consensus 432 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNP 472 (615)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 568877 333333 678888887654 356678777763
No 116
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.76 E-value=0.82 Score=49.52 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=63.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 430 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 430 (615)
.++..+|.|+|+|..|..+|..|.. .|. +++++|+. . +......+.... ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 3567799999999999999999865 253 57788763 1 112222111100 01123578888
Q ss_pred Hhcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 431 VNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 431 V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
++.. ++|++| ++.+.+...+++++.+...- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 45445456788888887554 356888888865
No 117
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.66 E-value=1.3 Score=44.07 Aligned_cols=94 Identities=12% Similarity=0.112 Sum_probs=57.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCccccCCccCccccchhhc--------cccCCCC-
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWA--------HEHEPVK- 425 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~--~GLi~~~R~~~L~~~k~~fA--------~~~~~~~- 425 (615)
||.|+|+|..|..+|..|... | .+++++|+ +.- .++..++... ....-..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988753 4 37888887 321 0111111000 0000112
Q ss_pred -CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 426 -ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 426 -~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
++.|+++. +|++|= +... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67787775 887773 3323 25788888876533456888888865
No 118
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=86.64 E-value=3.2 Score=45.56 Aligned_cols=100 Identities=13% Similarity=0.253 Sum_probs=55.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH----H
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV----D 429 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~----e 429 (615)
-+.||||+|||+.|-++|.+|++- .++. ..+|.+.|++-. +.+-.......+....-...+.. .
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVDVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCCHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhhHHhhcCCceeEEeccchhHHHHHHH
Confidence 357899999999999999999764 2332 247888887521 11101111112221111112333 3
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+|+. +|++|=+|- ..++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s~--~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVSI--GISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECCS--SSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECCc--cccCHHHHHHHHHc--CCCEEECCC
Confidence 4443 599996553 35777888876532 223455665
No 119
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.56 E-value=1.5 Score=42.34 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=60.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|+|..|..+|..|... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999988753 531 12478888873 1 1222222211 11123578899987
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 474 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 474 (615)
+|++| ++..+ -..+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 33333 45678888776543 4557777777664
No 120
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.55 E-value=3.3 Score=42.36 Aligned_cols=94 Identities=14% Similarity=0.249 Sum_probs=60.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. .+ ....+ .+ .-...++.|
T Consensus 150 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~---g~~~~~l~e 206 (330)
T 2gcg_A 150 GYGLTQSTVGIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF---QAEFVSTPE 206 (330)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT---TCEECCHHH
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc---CceeCCHHH
Confidence 357889999999999999999998753 253 588888741 11 11111 11 001127888
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.-. ..++++++.++.|. +..++.-.|.
T Consensus 207 ~l~~--aDvVi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 207 LAAQ--SDFIVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8886 898874432 23577888888874 4556665554
No 121
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.49 E-value=0.63 Score=52.33 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=33.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999999864 75 799999986
No 122
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.40 E-value=0.99 Score=46.67 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=65.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCC---CCHHH
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVD 429 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~e 429 (615)
++..||.|+|||..|.++|.+|+. .|+ + .+.|+|.+-=..++-..+|.+.. .|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEEEEeCCH-H
Confidence 456799999999999999988865 365 2 69999985211110001132221 122111111 344 7
Q ss_pred HHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 430 AVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
+++. .|++|=+.+.+ |. | -+++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7776 89887554433 32 1 156778888899899999999998
No 123
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.29 E-value=5.5 Score=40.84 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=61.8
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. +. + .. ..+ .-...+|.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHH
Confidence 567999999999999999999998864 253 688888742 11 1 00 011 011247889
Q ss_pred HHhccCCcEEEEcc-C---CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTS-G---QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S-~---~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.- . ..++++++.++.|. +..+|.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8886 88887432 2 12577888888884 4567766663
No 124
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=86.17 E-value=3.3 Score=43.26 Aligned_cols=147 Identities=15% Similarity=0.115 Sum_probs=86.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+... . ....+.. ......+|.|
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~e 216 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKP-----FGC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNE 216 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGG-----GCC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHH
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHH-----CCC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHH
Confidence 678999999999999999999998853 264 5888887521 0 1111100 0111257999
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYG 505 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~ 505 (615)
+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.---|---.+|++ +|+.-.|.--=|++--..
T Consensus 217 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~ 289 (351)
T 3jtm_A 217 MLPK--CDVIVINMPLTEKTRGMFNKELIGKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAP 289 (351)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC
T ss_pred HHhc--CCEEEECCCCCHHHHHhhcHHHHhcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCC
Confidence 9987 89888431 234689999999995 677888777633222222233443 466443432222111000
Q ss_pred CeeeCc-CCCccccccchhhHHH
Q 007156 506 DNVFVP-GQANNAYIFPGLGLGL 527 (615)
Q Consensus 506 G~~~~p-~Q~NN~yiFPGiglG~ 527 (615)
...| -+..|+.+-|=++-..
T Consensus 290 --~~~pL~~~~nvilTPHia~~t 310 (351)
T 3jtm_A 290 --KDHPWRYMPNQAMTPHTSGTT 310 (351)
T ss_dssp --TTCGGGTSTTBCCCCSCGGGS
T ss_pred --CCChhhcCCCEEECCcCCCCC
Confidence 0011 2345788888775443
No 125
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.02 E-value=0.46 Score=48.08 Aligned_cols=98 Identities=17% Similarity=0.329 Sum_probs=54.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch-hhcc----ccCCCCCHHH
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH----EHEPVKELVD 429 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~-~fA~----~~~~~~~L~e 429 (615)
+.||.|+|+|+-|..+|..|..+ | .+++++|+..- +.+.+..... .|-. ...-..++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999998753 4 46888887411 1011111000 0000 0000134555
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCc
Q 007156 430 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 475 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~ 475 (615)
++. .|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 443 67655 23222 456777766654 45577788887653
No 126
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=85.98 E-value=4.2 Score=41.64 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=66.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----ccCCCCCHHH
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVD 429 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~e 429 (615)
...++.|+|+|..|-.+++.+... .+ -++|+++|+. +.. .+...+.+ +.... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~a~---~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------ASP---EILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------CCH---HHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------HHH---HHHHHHHHhcCCeEEEe-CHHH
Confidence 457999999999998888877643 23 3789999996 212 22222221 11123 8999
Q ss_pred HHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCcEEEecCC--CCCcCCCCHHHH
Q 007156 430 AVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEEA 483 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSN--Pts~aEctpedA 483 (615)
+++. .|++|-+.... .+|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9987 99999765433 25555443 36778888875 44 578888754
No 127
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=85.91 E-value=1.5 Score=46.54 Aligned_cols=121 Identities=20% Similarity=0.245 Sum_probs=68.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
.++.+||+|+|.|.+|+++|++|.+ .| .++...|.+-.-.....+.|...--++-..+.+ . +.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~-~---~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP-L---ELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC-G---GGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCCh-H---Hhh
Confidence 4678999999999999999988865 36 478889985311000001121111111111111 1 111
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeeC
Q 007156 432 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFV 510 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~G~~~~ 510 (615)
+. .+|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|--||| ||||-.
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTTT 126 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTTT 126 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHHH
Confidence 21 268888655655 34677766654 345665 22 333455567788888998 787543
No 128
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.85 E-value=0.41 Score=52.14 Aligned_cols=126 Identities=15% Similarity=0.234 Sum_probs=77.0
Q ss_pred CceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-c-ccC-C---CCCH
Q 007156 355 DQRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H-EHE-P---VKEL 427 (615)
Q Consensus 355 d~riv~~GAGsA-G~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~-~~~-~---~~~L 427 (615)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. . ..+ . ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 459999999996 55566666531 01432 36799999853 22111111112221 1 111 1 2579
Q ss_pred HHHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 428 VDAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.++++. +|++|=+.+.++. .=+++++.|.++|..-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899987 9999866655321 1358889999999999999999998
Q ss_pred CcCCCCHHHHhcccCCcEEEeeC
Q 007156 474 SQSECTAEEAYTWSQGRAIFASG 496 (615)
Q Consensus 474 s~aEctpedA~~wT~GraifASG 496 (615)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 3334455555443566654
No 129
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.77 E-value=0.92 Score=45.73 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=58.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCc--cc-cchhhc-cccCCCCCHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL--QH-FKKPWA-HEHEPVKELVDAV 431 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L--~~-~k~~fA-~~~~~~~~L~e~V 431 (615)
.||.|+|+|+-|..+|..|.+. | .+++++|+.-. ..=+...+ +. ....+. ++..-..++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 5899999999999999988653 4 47888887531 00000000 00 000000 0001113454443
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007156 432 NAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 474 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 474 (615)
+ .+|++| ++... ..++++++.++.+- +..+|+.+.|-..
T Consensus 70 ~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 70 T--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp S--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred C--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 2 478777 55544 34678999987543 4567888999764
No 130
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.73 E-value=1.1 Score=45.03 Aligned_cols=47 Identities=6% Similarity=0.207 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 341 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 341 gll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
|+..+++..|.. .+.+++++|||.+|.+++..|.. .|. ++|+++++.
T Consensus 106 G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 106 AIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 334444443443 46799999999999999888764 364 689998884
No 131
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.65 E-value=1.2 Score=45.37 Aligned_cols=104 Identities=19% Similarity=0.287 Sum_probs=61.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC--CCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE--PVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~--~~~~L~e~V~~ 433 (615)
.||.|+|||..|.++|-.++. .|+ . +++++|.+-=-.++...+|.+...+...... ...++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999998754 353 1 3999997520000000112221111111100 01456 67776
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 434 IKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 434 vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+.. .-+++.+.+.+++..-+|+--|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8998866544421 1246778888888888887789998
No 132
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.54 E-value=0.58 Score=48.25 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=64.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCC--CCHHHHH
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAV 431 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V 431 (615)
+..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=..++-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 355 2 69999985211100001132221 111111111 1224677
Q ss_pred hccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 432 NAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
+. .|++|=+.+.+ |. | -+++++.+.+++..-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 89887555443 31 1 256778888899888999999997
No 133
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.52 E-value=1.2 Score=46.91 Aligned_cols=96 Identities=23% Similarity=0.334 Sum_probs=55.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-----------ccCCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----------EHEPV 424 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-----------~~~~~ 424 (615)
.||+|+|||-.|..+|+.|.+ .|- .-.+++++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999999777777766643 231 01478888874 111 2222222211 11222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 425 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 425 ~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
.++.++++..++|++|=+++.. +..+++++..+.. ..+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~--~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPY--QDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGG--GHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCcc--cChHHHHHHHHhC-CCEE-EecC
Confidence 4688889888999999876532 4567776654433 3444 2444
No 134
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=85.43 E-value=2.7 Score=44.25 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=90.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.++.|+|.|..|-.+|+.+.. .|+ +++.+|+.. .. + .... ..-...+|.|
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~V~~~d~~~----~~-~---~~~~----~g~~~~~l~e 226 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------RIRVFDPWL----PR-S---MLEE----NGVEPASLED 226 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------EEEEECSSS----CH-H---HHHH----TTCEECCHHH
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------EEEEECCCC----CH-H---HHhh----cCeeeCCHHH
Confidence 567889999999999999999998743 254 688888641 10 0 0010 0111247999
Q ss_pred HHhccCCcEEEEc----cCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccC
Q 007156 430 AVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYG 505 (615)
Q Consensus 430 ~V~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~ 505 (615)
+++. .|+++=. ....++|+++.++.|. +.-++.=.|.-.---|---.+|+ ..|+.- | |- +|. .
T Consensus 227 ll~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~-a-aL---DV~-~ 293 (365)
T 4hy3_A 227 VLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFILLSRADVVDFDALMAAV--SSGHIV-A-AS---DVY-P 293 (365)
T ss_dssp HHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEECSCGGGSCHHHHHHHH--HTTSSE-E-EE---SCC-S
T ss_pred HHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEECcCCchhCHHHHHHHH--HcCCce-E-Ee---eCC-C
Confidence 9986 9998832 3345689999999995 56688777653311222222333 356543 3 31 111 0
Q ss_pred Ceee----CcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 506 DNVF----VPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 506 G~~~----~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
.... .--+..|+.+-|=+|-... .--+.|...+++-|.....
T Consensus 294 ~EPl~~~~pL~~~~nvilTPHia~~t~-----e~~~~~~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 294 EEPLPLDHPVRSLKGFIRSAHRAGALD-----SAFKKMGDMVLEDMDLMDR 339 (365)
T ss_dssp SSSCCTTCGGGTCTTEEECCSCSSCCH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCChhhcCCCEEECCccccCHH-----HHHHHHHHHHHHHHHHHHc
Confidence 0010 0124568888887753222 1234455556666665554
No 135
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.30 E-value=1.6 Score=42.10 Aligned_cols=95 Identities=13% Similarity=0.109 Sum_probs=57.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccc---hhhccccCCCCCHHHHHhc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK---KPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k---~~fA~~~~~~~~L~e~V~~ 433 (615)
||.|+|+|..|..+|..|... | .+++++|+.- ++.+.+.... ..+-.. -...+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eeecC-ccccCC
Confidence 799999999999999988653 4 3788888752 2111121110 000000 01123 466765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
+|++|= +.... ..+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888773 33332 3689999887643 456777789865
No 136
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.23 E-value=0.52 Score=48.57 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=63.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCC--CCHHHHHhcc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 434 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~v 434 (615)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-+|.+.. .+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhccc-cccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988763 54 2589999985311111001132211 121100111 134567776
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877444433 31 1256777888999999999999998
No 137
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.99 E-value=3.1 Score=37.53 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=55.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHHHh
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAVN 432 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~V~ 432 (615)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +...+......+. -+..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8888888877764 24 46888887521 1011101111111 12222245777887
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHccCCCcEEEecC
Q 007156 433 AIKPTILIGTSGQGRT---------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~---------Fteevv~~Ma~~~erPIIFaLS 470 (615)
. +|++|=+.+.... .+..++++|.+..-+.+||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 5 8999988775431 1456667766554455665433
No 138
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.68 E-value=0.67 Score=45.69 Aligned_cols=37 Identities=27% Similarity=0.470 Sum_probs=31.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d 64 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFD 64 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCC
Confidence 35578999999999999999999875 65 799999997
No 139
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=84.64 E-value=0.79 Score=46.44 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=65.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc---cccCCccCccccchhhccccCCCCCHHHHH
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL---IVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ..... .+|.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~-~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVV-MELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchh-hhhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24310000137999997420 00000 012211112322222225688888
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 432 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
++ +|++|=+.+.+.. .|.++++++.+++ .+..++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977765532 3456788888876 566778899996
No 140
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.63 E-value=6 Score=42.52 Aligned_cols=164 Identities=13% Similarity=0.196 Sum_probs=97.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+..- .... -+ ....+|.|
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~e 204 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAES-----LGM-------TVRYYDTSDK--------LQYG---NV---KPAASLDE 204 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECTTCC--------CCBT---TB---EECSSHHH
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEECCcch--------hccc---Cc---EecCCHHH
Confidence 567899999999999999999998754 264 6888887411 1100 01 12357999
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCC-C--CCc
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-F--DPF 502 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSP-F--~pV 502 (615)
+++. .|+++=.-- ..+.|+++.++.|. +..++.=.|.=.---|---.+|+ .+|+.- +-|-. | +|.
T Consensus 205 ll~~--aDvV~lhvPlt~~T~~li~~~~l~~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i~-gAalDVf~~EP~ 276 (416)
T 3k5p_A 205 LLKT--SDVVSLHVPSSKSTSKLITEAKLRKMK---KGAFLINNARGSDVDLEALAKVL--QEGHLA-GAAIDVFPVEPA 276 (416)
T ss_dssp HHHH--CSEEEECCCC-----CCBCHHHHHHSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSEE-EEEECCCSSCCS
T ss_pred HHhh--CCEEEEeCCCCHHHhhhcCHHHHhhCC---CCcEEEECCCChhhhHHHHHHHH--HcCCcc-EEEeCCCCCCCC
Confidence 9987 898874321 23689999999994 67788877764422222223344 356543 22322 2 121
Q ss_pred ccCCeeeCc-CCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 503 EYGDNVFVP-GQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 503 ~~~G~~~~p-~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
.-+.....| -+..|+.+-|=+|-....+ -+.|...+++.|.+...
T Consensus 277 ~~~~~~~~pL~~~~nvilTPHig~~T~ea-----~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 277 SNGERFSTPLQGLENVILTPHIGGSTEEA-----QERIGTEVTRKLVEYSD 322 (416)
T ss_dssp STTSCCCCTTTTCTTEEECCSCTTCCHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CcccccchhHhcCCCEEECCCCCCCCHHH-----HHHHHHHHHHHHHHHHh
Confidence 111000112 3567999999886433222 24556666777766653
No 141
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=84.59 E-value=0.92 Score=46.28 Aligned_cols=99 Identities=18% Similarity=0.364 Sum_probs=61.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCcc----CccccchhhccccC--CCCCHHHH
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHE--PVKELVDA 430 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~--~~~~L~e~ 430 (615)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++-+ +|.+....+..... ...+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 689999999999999777542 44 379999985 22211 12211101111100 01344 66
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 431 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
++. .|++|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 776 9999866555431 1357888888888888777789998
No 142
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.55 E-value=6.4 Score=40.13 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=63.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..+.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .. + ...+|.|
T Consensus 139 ~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~e 189 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRIGQAVAKRALA-----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEE 189 (311)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CS---SS------S----CBCCHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---cc------c----ccCCHHH
Confidence 457899999999999999999998864 253 688888741 11 11 1 1357989
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.- ...++++++.++.|. +..++.=.|.
T Consensus 190 ll~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~sr 230 (311)
T 2cuk_A 190 LLKE--ADVVSLHTPLTPETHRLLNRERLFAMK---RGAILLNTAR 230 (311)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHTTSC---TTCEEEECSC
T ss_pred HHhh--CCEEEEeCCCChHHHhhcCHHHHhhCC---CCcEEEECCC
Confidence 9986 89888652 234678888888773 5678888886
No 143
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=84.44 E-value=2.4 Score=42.84 Aligned_cols=101 Identities=12% Similarity=0.180 Sum_probs=60.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
...||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.+...++ + ...-..+..|+++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH 84 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc
Confidence 345899999999999999988653 531 11468888874 110 01111110 0 00112467788876
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCCC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 474 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPts 474 (615)
.|++| ++..+ -..+++++.++.. .+..+|.-++|..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 78766 33333 4577888877653 34568888888774
No 144
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.34 E-value=1.8 Score=47.07 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=59.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch-hhc-cccCCCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~e~V~~ 433 (615)
.+|.|+|+|..|.++|..|... |. +++++|+. .+ .+..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QS---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SH---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 53 67888874 11 1211111 000 001123578888775
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 434 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 434 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
. +||++| ++.+.+...+++++.+..+- +.-||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 44434345677777776543 345777788743
No 145
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=84.34 E-value=2.1 Score=44.35 Aligned_cols=162 Identities=18% Similarity=0.164 Sum_probs=95.1
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. + . ...... .....+|.
T Consensus 134 ~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~dr~~---~-~---~~~~~~-----~~~~~~l~ 189 (324)
T 3hg7_A 134 PYQGLKGRTLLILGTGSIGQHIAHTGKH-----FGM-------KVLGVSRSG---R-E---RAGFDQ-----VYQLPALN 189 (324)
T ss_dssp CCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC---C-C---CTTCSE-----EECGGGHH
T ss_pred CCcccccceEEEEEECHHHHHHHHHHHh-----CCC-------EEEEEcCCh---H-H---hhhhhc-----ccccCCHH
Confidence 3578999999999999999999999864 264 688888764 1 1 111111 11235799
Q ss_pred HHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEe-----eCCCC
Q 007156 429 DAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPF 499 (615)
Q Consensus 429 e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifA-----SGSPF 499 (615)
|+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-.---|-.-.+|++ +|+.-.| ..=|.
T Consensus 190 ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl 262 (324)
T 3hg7_A 190 KMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPL 262 (324)
T ss_dssp HHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSC
T ss_pred HHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCC
Confidence 99986 89888531 224678888888884 567887776533112222223332 4443111 11121
Q ss_pred CCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCcc
Q 007156 500 DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQE 554 (615)
Q Consensus 500 ~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~~ 554 (615)
++ + ..--+..|+.+-|=++- .+. ...|...+++-|.....-+
T Consensus 263 ~~---~---~pL~~~~nvilTPHia~------~t~-~~~~~~~~~~nl~~~~~G~ 304 (324)
T 3hg7_A 263 PA---D---SPLWGQPNLIITPHNSA------YSF-PDDVAQIFVRNYIRFIDGQ 304 (324)
T ss_dssp CT---T---CTTTTCTTEEECCSCSS------CCC-HHHHHHHHHHHHHHHHTTC
T ss_pred CC---C---ChhhcCCCEEEeCCCcc------ccH-HHHHHHHHHHHHHHHHcCC
Confidence 11 0 00124568888887752 232 3567777777777766533
No 146
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.26 E-value=4.8 Score=41.41 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=60.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + ..+..-+. ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV-N---VEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH-H---HHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h---hhhhcCce----ecCHHHH
Confidence 78999999999999999999998753 253 688888742 11 0 00100011 1378888
Q ss_pred HhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 431 VNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 431 V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
++. .|+++=.-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874322 13578888888884 45 7766663
No 147
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.17 E-value=1.2 Score=44.34 Aligned_cols=32 Identities=31% Similarity=0.542 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|.+||..++.+ | -+++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G-------~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----G-------HTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 5899999999999999998753 5 368899974
No 148
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=84.17 E-value=3.4 Score=43.24 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=64.7
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.+|.|+|.|..|..+|+.+.. .|+ ++++.+|+... . ....+ .+ ......+|.
T Consensus 158 ~~~~l~g~tvgIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~ 216 (364)
T 2j6i_A 158 DAYDIEGKTIATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAEE-KV--GARRVENIE 216 (364)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHHH-HT--TEEECSSHH
T ss_pred CcccCCCCEEEEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHHH-hc--CcEecCCHH
Confidence 4678999999999999999999998853 253 34888886421 0 11011 10 001124799
Q ss_pred HHHhccCCcEEEEccCC----CCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.--. .++|+++.+..|. +.-+|.-.|.
T Consensus 217 ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~ar 258 (364)
T 2j6i_A 217 ELVAQ--ADIVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTAR 258 (364)
T ss_dssp HHHHT--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSC
T ss_pred HHHhc--CCEEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCC
Confidence 98885 8998854322 2688998888884 5678887776
No 149
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.07 E-value=2.1 Score=40.62 Aligned_cols=80 Identities=16% Similarity=0.231 Sum_probs=49.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
..+...||.|+|+|..|..+|..|... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 356678999999999999999988652 4 368888763 11 1
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 431 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
++ ++|++| ++... ...+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi-~av~~-~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVI-MAVPY-PALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEE-ECSCH-HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEE-EcCCc-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 366655 22222 335677776654323678888999653
No 150
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=84.00 E-value=2.2 Score=43.02 Aligned_cols=111 Identities=14% Similarity=0.174 Sum_probs=63.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccC-CccCccccch--hhccc------cCCCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFKK--PWAHE------HEPVK 425 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~-R~~~L~~~k~--~fA~~------~~~~~ 425 (615)
..||.|+|+|.-|..+|..|...-... . ....+++++|+..-.... +.+.+..... .|-.. ..-..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 368999999999999999997652110 0 001468888875321100 0011111000 01000 00114
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 474 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 474 (615)
++.|+++. +|++| ++... -..+++++.++.+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888875 88777 44333 46789999887653 4668889999654
No 151
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=84.00 E-value=5.6 Score=41.42 Aligned_cols=160 Identities=18% Similarity=0.191 Sum_probs=83.5
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .. .+. ...+|.|
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~dr~~----~~--~~-----~~~----~~~sl~e 218 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SVRYWNRST----LS--GV-----DWI----AHQSPVD 218 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSSC----CT--TS-----CCE----ECSSHHH
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCc----cc--cc-----Cce----ecCCHHH
Confidence 578999999999999999999998853 354 688888742 11 01 111 1257999
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCC--Ccc
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFE 503 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~--pV~ 503 (615)
+++. .|+++=.-- ..++++++.++.|. +.-++.=.|.=.---|-.-.+|++ +|+.-.|.=-=|+ |..
T Consensus 219 ll~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~ 291 (340)
T 4dgs_A 219 LARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNVARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI 291 (340)
T ss_dssp HHHT--CSEEEECC----------CHHHHHHTT---TTCEEEECSCC----------------CCSSEEEESCCSSSSSC
T ss_pred HHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEECCCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC
Confidence 9987 898884321 24678889999885 566887777644333333334443 3443222111111 110
Q ss_pred cCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 504 YGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 504 ~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
+. .--+..|+.+-|=+|-....+ .+.|...+++.|.....
T Consensus 292 -~~---~L~~~~nvilTPHia~~t~e~-----~~~~~~~~~~nl~~~~~ 331 (340)
T 4dgs_A 292 -RS---EFHTTPNTVLMPHQGSATVET-----RMAMGKLVLANLAAHFA 331 (340)
T ss_dssp -CS---HHHHSSSEEECSSCSSCCHHH-----HHHHHHHHHHHHHHHHT
T ss_pred -cc---chhhCCCEEEcCcCCcCCHHH-----HHHHHHHHHHHHHHHHc
Confidence 00 112446777777765322111 23455555565555543
No 152
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=83.97 E-value=0.84 Score=47.01 Aligned_cols=106 Identities=19% Similarity=0.272 Sum_probs=66.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC--ccccCCccCccccchhhccccCCC---CCH
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--LIVSSRLESLQHFKKPWAHEHEPV---KEL 427 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G--Li~~~R~~~L~~~k~~fA~~~~~~---~~L 427 (615)
.+..||.++|||..|.++|..++. .|+ ..+.++|.+- -..++...+|.+. .++....... .+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d- 72 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSD- 72 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESC-
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCC-
Confidence 345799999999999999998875 254 3799999861 1111111123222 2333211111 12
Q ss_pred HHHHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 428 VDAVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
.++++. .|++|=+.+.+ |- | -+++++.+++++..-+|+-.|||.
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 356665 89887554433 21 2 257888888999999999999998
No 153
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.63 E-value=0.64 Score=48.13 Aligned_cols=106 Identities=16% Similarity=0.204 Sum_probs=65.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC-CCCHHHHHhc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~e~V~~ 433 (615)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|++. .+|....-. ..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 54 258999997410000000013332 333311000 1112356665
Q ss_pred cCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007156 434 IKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 434 vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+ |- | -+++++.+.+++..-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 88877554432 31 1 257778888999999999999998
No 154
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=83.51 E-value=1.4 Score=46.97 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=20.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALE 377 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~ 377 (615)
.||.|+|||+=|+++|.+|.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 3999999999999999999875
No 155
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=83.50 E-value=4.8 Score=41.39 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=64.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .+ + .++. ..+|.|
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~--~~---~-~~~~----~~~l~e 194 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRIGRVAAQIFHG-----MGA-------TVIGEDVFE----IK--GI---E-DYCT----QVSLDE 194 (331)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CC--SC---T-TTCE----ECCHHH
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCc----cH--HH---H-hccc----cCCHHH
Confidence 467889999999999999999998864 253 588888742 11 11 1 1111 237999
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.- ...++|+++.++.|. +.-++.=.|.
T Consensus 195 ll~~--aDvV~~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 195 VLEK--SDIITIHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp HHHH--CSEEEECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred HHhh--CCEEEEecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 9986 89988641 234689999999884 5668887774
No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.42 E-value=1.4 Score=36.33 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=51.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHHHh
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAVN 432 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~V~ 432 (615)
...+|+|+|+|..|..+++.|.. .|. .+++++|++. ++.+.+......+. -+.....++.++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 34689999999999999888865 241 4688888741 11111110010111 01111234666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc
Q 007156 433 AIKPTILIGTSGQGRTFTKEVVEAMASL 460 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~ 460 (615)
++|++|=+.+ ..++..+++.+.+.
T Consensus 69 --~~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 69 --GFDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp --TCSEEEECSC--GGGHHHHHHHHHHT
T ss_pred --CCCEEEECCC--chhhHHHHHHHHHh
Confidence 4899996653 34677777777643
No 157
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.17 E-value=1.1 Score=46.61 Aligned_cols=100 Identities=19% Similarity=0.183 Sum_probs=59.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccc--hhhccc------cCCCCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--KPWAHE------HEPVKE 426 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k--~~fA~~------~~~~~~ 426 (615)
..||.|+|+|+-|.++|..|.+. | .+++++|++-- +.+.++... ..|-.. ..-..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~----~~~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESD----HVDEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHH----HHHHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHH----HHHHHHHcCCCcccCCCCccCCCeEEECC
Confidence 36899999999999999998752 4 36778887411 000111100 001000 001247
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007156 427 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 474 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 474 (615)
+.|+++. +|++| ++.+. -+.+++++.++.+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888875 77776 33332 36778888887654 4567778888553
No 158
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=82.98 E-value=3.4 Score=42.71 Aligned_cols=161 Identities=17% Similarity=0.279 Sum_probs=94.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . .......+ ...+|.|
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~-----~G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~e 187 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASA-----LGM-------HVIGVNTTGH----P---ADHFHETV-----AFTATAD 187 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHH
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHh-----CCC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHH
Confidence 678999999999999999999998864 264 6888887521 1 11111111 1246888
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEee-----CCCCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS-----GSPFD 500 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifAS-----GSPF~ 500 (615)
+++. .|+++=.- ...++|+++.+..|. +..++.=.|.-..--|-.-.+|++ +|+.-.|. .-|.+
T Consensus 188 ll~~--aDvV~l~lPlt~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~ 260 (324)
T 3evt_A 188 ALAT--ANFIVNALPLTPTTHHLFSTELFQQTK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLP 260 (324)
T ss_dssp HHHH--CSEEEECCCCCGGGTTCBSHHHHHTCC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCC
T ss_pred HHhh--CCEEEEcCCCchHHHHhcCHHHHhcCC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCC
Confidence 8886 89888431 224689999998884 567887777533222222223333 45432221 11111
Q ss_pred CcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 501 PFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 501 pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
+ + ..--+..|+.+-|=++-. ...-.+.|...+++-|...+.
T Consensus 261 ~----~--~pL~~~~nvilTPHia~~-----t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 261 T----D--HPLWQRDDVLITPHISGQ-----IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp T----T--CGGGGCSSEEECCSCTTC-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred C----C--ChhhcCCCEEEcCccccC-----hHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 001245688888877521 122346666667777766653
No 159
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.91 E-value=1.7 Score=45.05 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=26.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999988763 65 57888863
No 160
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=82.79 E-value=1.8 Score=43.97 Aligned_cols=102 Identities=21% Similarity=0.306 Sum_probs=64.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CC-ccccCCccCccccchhhccccCCC----CCHH
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KG-LIVSSRLESLQHFKKPWAHEHEPV----KELV 428 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~--~G-Li~~~R~~~L~~~k~~fA~~~~~~----~~L~ 428 (615)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+. .-..+|.+.. ++....-.. .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~-~~~~dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLE-GLREDIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHH-HHHHHHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhH-HHHHHHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999998887753 243 256999997 31 000 0000122211 222100011 1367
Q ss_pred HHHhccCCcEEEEccCCCC---C-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 429 DAVNAIKPTILIGTSGQGR---T-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g---~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
++++. .|++|=+.+.+. . .+++++++|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 78886 898887766542 1 3568889999999 99999999998
No 161
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=82.64 E-value=2.3 Score=43.73 Aligned_cols=163 Identities=13% Similarity=0.119 Sum_probs=94.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- ...... .+. ...+|.|
T Consensus 134 ~~~l~g~tvGIiG~G~IG~~vA~~l~~-----~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~e 189 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVLGAKVAESLQA-----WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRA 189 (315)
T ss_dssp CCCSTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHH
T ss_pred CCCcCCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHH
Confidence 567999999999999999999998854 354 6788887421 111111 110 1146889
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCccc-
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY- 504 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~- 504 (615)
+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-..--|---.+|++ .|+.-.|.=-=|++--.
T Consensus 190 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~ 262 (315)
T 3pp8_A 190 FLNQ--TRVLINLLPNTAQTVGIINSELLDQLP---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLP 262 (315)
T ss_dssp HHHT--CSEEEECCCCCGGGTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC
T ss_pred HHhh--CCEEEEecCCchhhhhhccHHHHhhCC---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCC
Confidence 8886 89887431 234688999988884 567777776533222222223333 45543332111111000
Q ss_pred CCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 505 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 505 ~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
.+. .--+..|+.+-|=++ +.+. .+.|...+++-|.....
T Consensus 263 ~~~--pL~~~~nvilTPHia------~~t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 263 QES--PLWRHPRVAMTPHIA------AVTR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp TTC--GGGGCTTEEECSSCS------SCCC-HHHHHHHHHHHHHHHHH
T ss_pred CCC--hhhcCCCEEECCCCC------cccH-HHHHHHHHHHHHHHHHc
Confidence 000 012456888888775 2332 25677777777766654
No 162
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.52 E-value=1.5 Score=37.31 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=26.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999988864 24 468899874
No 163
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.23 E-value=6.3 Score=40.75 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=66.0
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.|..|.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|+..- . .. . ...-...+|.
T Consensus 135 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~~------~-~~--~----~~g~~~~~l~ 189 (334)
T 2pi1_A 135 LARELNRLTLGVIGTGRIGSRVAMYGLA-----FGM-------KVLCYDVVKR------E-DL--K----EKGCVYTSLD 189 (334)
T ss_dssp CBCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCC------H-HH--H----HTTCEECCHH
T ss_pred cceeccCceEEEECcCHHHHHHHHHHHH-----CcC-------EEEEECCCcc------h-hh--H----hcCceecCHH
Confidence 3667999999999999999999999864 254 6888887421 1 10 0 0011123599
Q ss_pred HHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 429 DAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 429 e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
|+++. .|+++=.- ...++|+++.++.|. +.-|+.=.|.-.
T Consensus 190 ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRg~ 233 (334)
T 2pi1_A 190 ELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTARGK 233 (334)
T ss_dssp HHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSCGG
T ss_pred HHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEECCCCc
Confidence 99986 89887541 334689999999994 567887777533
No 164
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.12 E-value=2.5 Score=41.90 Aligned_cols=75 Identities=24% Similarity=0.332 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHH-hCc-cccc--ccchH-HHHHHHHHHHHHh-CCCCCCceEEEeC-cChHHHHHHHHHHHHHHHhcCCC
Q 007156 313 LLHEFMTAVKQN-YGE-RILI--QGTAS-VVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMP 385 (615)
Q Consensus 313 ~vdeFv~Av~~~-~gp-~vli--QGTAa-VvLAgll~Alr~~-g~~L~d~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls 385 (615)
.++++.+.++.. +|+ ++.+ ...|. ..-.|++.+++.. +.++++.+++|.| +|.+|.+++..|.+ .|.
T Consensus 71 ~~~~~~~~~~~~~~gavnt~~~~~~~G~nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~-----~G~- 144 (287)
T 1lu9_A 71 AGERVFEAVKKRFFGPFRVSCMLDSNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG-----EGA- 144 (287)
T ss_dssp HHHHHHHHHHHHCBTTBCCEEEECSTTHHHHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH-----TTC-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCcCCchHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH-----CcC-
Confidence 455666666654 454 3333 22222 2346777777776 7889999999999 89999999888865 352
Q ss_pred hhhhcCeEEEEccC
Q 007156 386 LEETRKKIWLVDSK 399 (615)
Q Consensus 386 ~eeArk~i~lvD~~ 399 (615)
+++++|++
T Consensus 145 ------~V~i~~R~ 152 (287)
T 1lu9_A 145 ------EVVLCGRK 152 (287)
T ss_dssp ------EEEEEESS
T ss_pred ------EEEEEECC
Confidence 48888874
No 165
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=81.86 E-value=0.82 Score=42.62 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=59.0
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc---c--ccCCCCCHHHH
Q 007156 357 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---H--EHEPVKELVDA 430 (615)
Q Consensus 357 riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA---~--~~~~~~~L~e~ 430 (615)
||.|+| +|..|..+|..|.+ .| .+++++|++- ++ +...++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988864 24 3688888741 11 211111110 0 011 2468888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 431 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
++. .|++|=+.. . -..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 898884433 3 235677776654334678999999774
No 166
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=81.86 E-value=1.7 Score=44.63 Aligned_cols=110 Identities=10% Similarity=0.178 Sum_probs=60.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccC-CccCccccc--hhhccc------cCCCCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFK--KPWAHE------HEPVKE 426 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~-R~~~L~~~k--~~fA~~------~~~~~~ 426 (615)
.||.|+|+|.-|.++|..|...-... . .-..+++++|+..-+... +.+.+.... ..|-.. ..-..+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999997652110 0 000468888875321100 001111100 000000 001246
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----c-CCCcEEEecCCCCC
Q 007156 427 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----L-NEKPIIFSLSNPTS 474 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~-~erPIIFaLSNPts 474 (615)
+.|+++. +|++| ++... -..+++++.++. + .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788875 78776 33322 467888888865 3 34568888998654
No 167
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=81.70 E-value=1.4 Score=45.39 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=54.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----ccCCCCCHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVDAV 431 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~e~V 431 (615)
-||+++|||-.|--+|+.|.+ ..++.++|... +++...+ +++. +..+..+|.+.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999988877776632 14677777641 1122221 2222 222334688888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 432 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
++ .|++|-+ .|.-+..+++++-.+... . +|-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 85 8998854 454678888888665433 2 455663
No 168
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=81.54 E-value=1.2 Score=46.28 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56788999999999999999999876 65 799999976
No 169
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=81.48 E-value=7.3 Score=39.61 Aligned_cols=159 Identities=12% Similarity=0.092 Sum_probs=96.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ... ++ ...+|.|+
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~----~~---~~~-----~~---~~~~l~el 170 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS----VD---QNV-----DV---ISESPADL 170 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC----CC---TTC-----SE---ECSSHHHH
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc----cc---ccc-----cc---ccCChHHH
Confidence 468899999999999999999998753 54 688888752 11 111 11 23579999
Q ss_pred HhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCC--CCccc
Q 007156 431 VNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPF--DPFEY 504 (615)
Q Consensus 431 V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF--~pV~~ 504 (615)
++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.=--| +|.
T Consensus 171 l~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~-- 241 (290)
T 3gvx_A 171 FRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWWNEPE-- 241 (290)
T ss_dssp HHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCTTTTS--
T ss_pred hhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhcccCCcchhhhhh--hccceEEeeccccCCcc--
Confidence 987 88887432 224678899888884 667888777533112222223333 343332211111 111
Q ss_pred CCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCCc
Q 007156 505 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQ 553 (615)
Q Consensus 505 ~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~~ 553 (615)
..--+..|+.+-|=++=| ....-.+.|...+++-|.....-
T Consensus 242 ----~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~~~ 282 (290)
T 3gvx_A 242 ----ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFFEG 282 (290)
T ss_dssp ----CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHTC-
T ss_pred ----cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhhcC
Confidence 112355688888887511 23445677888888888776653
No 170
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.47 E-value=2.1 Score=46.28 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=59.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-----cccCCCCCHHHHH
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----HEHEPVKELVDAV 431 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-----~~~~~~~~L~e~V 431 (615)
||.|+|+|..|..+|..|... |. +++++|+.. ++ +....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988652 53 588888741 11 111111100 0011235788888
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 432 NAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 432 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
+.. ++|++| ++.+.+...+++++.+...- +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 44434334677887776533 456788888854
No 171
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.45 E-value=7.9 Score=40.02 Aligned_cols=97 Identities=14% Similarity=0.067 Sum_probs=63.7
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....+ .+ ......+|.
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~ 215 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLE 215 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHH
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHH
Confidence 46789999999999999999999988522 353 6888887421 1 11111 00 000113788
Q ss_pred HHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.
T Consensus 216 ell~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~sr 257 (348)
T 2w2k_A 216 ELARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTAR 257 (348)
T ss_dssp HHHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred HHhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCC
Confidence 88886 898875421 23688888888884 4567765555
No 172
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.33 E-value=5 Score=39.64 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=62.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc----chhhcc-ccCCCCC
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKE 426 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~ 426 (615)
+...||+|.|| |-.|..+++.|++. |- .-+++.+|+...-. ....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888888763 52 24677777753211 11112111 111111 2222246
Q ss_pred HHHHHhccCCcEEEEccCCCCCC----------------CHHHHHHHHccCCCcEEEecC
Q 007156 427 LVDAVNAIKPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 470 (615)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999887754311 356788888776666888543
No 173
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=81.26 E-value=13 Score=38.63 Aligned_cols=92 Identities=11% Similarity=0.254 Sum_probs=65.8
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. . .... ..+ ...+|.
T Consensus 142 ~~~~l~gktvgIiGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ 195 (343)
T 2yq5_A 142 ISNEIYNLTVGLIGVGHIGSAVAEIFSA-----MGA-------KVIAYDVAY----N--PEFE----PFL----TYTDFD 195 (343)
T ss_dssp CBCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----C--GGGT----TTC----EECCHH
T ss_pred CccccCCCeEEEEecCHHHHHHHHHHhh-----CCC-------EEEEECCCh----h--hhhh----ccc----cccCHH
Confidence 4567899999999999999999998864 264 688888852 1 1011 111 113799
Q ss_pred HHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.-- ..++|+++.++.|. +..++.=.|.
T Consensus 196 ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aR 237 (343)
T 2yq5_A 196 TVLKE--ADIVSLHTPLFPSTENMIGEKQLKEMK---KSAYLINCAR 237 (343)
T ss_dssp HHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHHhc--CCEEEEcCCCCHHHHHHhhHHHHhhCC---CCcEEEECCC
Confidence 99987 899885432 24789999999995 6678876665
No 174
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.97 E-value=1.3 Score=44.86 Aligned_cols=87 Identities=18% Similarity=0.241 Sum_probs=52.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
+.|++|+|||.+|.+++..|.+. | .+|+++++. .++.+.|. .+.-......+|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~~~~~~~~l~------ 171 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGCDCFMEPPKS------ 171 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTCEEESSCCSS------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCCeEecHHHhc------
Confidence 78999999999999998888653 3 579999884 33322222 1110001112221
Q ss_pred CCcEEEEccCCC----CCCCHHHHH-HHHccCCCcEEEecC
Q 007156 435 KPTILIGTSGQG----RTFTKEVVE-AMASLNEKPIIFSLS 470 (615)
Q Consensus 435 kPtvLIG~S~~~----g~Fteevv~-~Ma~~~erPIIFaLS 470 (615)
++|++|-++..+ -.+.++.+. .+. +..+++=++
T Consensus 172 ~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 172 AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 699999776654 146777555 343 355776554
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=80.66 E-value=1.2 Score=45.34 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..||||+|+|.||+.+|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998653 31 1378888875
No 176
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=80.54 E-value=1.2 Score=47.99 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=32.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999874 75 799999986
No 177
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.30 E-value=2.7 Score=38.30 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=28.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988642 04 368888874
No 178
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.14 E-value=2.1 Score=46.22 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=59.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch-hhc-cccCCCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~e~V~~ 433 (615)
.||.|+|+|..|..+|..|... |. +++++|+.. + .+....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988652 53 588888741 1 1211111 000 000113578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 434 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 434 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
+ ++|++| ++.+.+...+++++.+..+- +.-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588777 44444345677887776543 345788888854
No 179
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.08 E-value=1.5 Score=43.01 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=57.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
-.||.|+|+|..|..+|..|... |. ..+++++|++. +.+...++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888741 1111111100000 012355566664
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCcEEEecCCC
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNP 472 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNP 472 (615)
+|++| ++.+.... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 88877 44444333 8888888764 456677767763
No 180
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=80.01 E-value=11 Score=38.34 Aligned_cols=88 Identities=16% Similarity=0.232 Sum_probs=62.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+..- + . . .....+|.|+
T Consensus 120 ~~l~g~~vgIIG~G~IG~~~A~~l~~-----~G~-------~V~~~dr~~~------~---~---~----~~~~~~l~el 171 (303)
T 1qp8_A 120 PLIQGEKVAVLGLGEIGTRVGKILAA-----LGA-------QVRGFSRTPK------E---G---P----WRFTNSLEEA 171 (303)
T ss_dssp CCCTTCEEEEESCSTHHHHHHHHHHH-----TTC-------EEEEECSSCC------C---S---S----SCCBSCSHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc------c---c---C----cccCCCHHHH
Confidence 36899999999999999999998864 254 6888887532 0 0 0 1123478888
Q ss_pred HhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 431 VNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 431 V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
++. .|+++=.- ...++|+++.++.|. +..++.=.|.
T Consensus 172 l~~--aDvV~l~~P~~~~t~~~i~~~~l~~mk---~gailin~sr 211 (303)
T 1qp8_A 172 LRE--ARAAVCALPLNKHTRGLVKYQHLALMA---EDAVFVNVGR 211 (303)
T ss_dssp HTT--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSC
T ss_pred Hhh--CCEEEEeCcCchHHHHHhCHHHHhhCC---CCCEEEECCC
Confidence 886 89887542 234578888888774 5668877776
No 181
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.79 E-value=1.7 Score=43.98 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=27.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 456999999999999999998753 53 58888874
No 182
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=79.62 E-value=1.5 Score=44.07 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=28.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+...||.|+|+|..|.++|..|... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57788874
No 183
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.61 E-value=2 Score=42.37 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..|... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999998753 5 367888874
No 184
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=79.51 E-value=2.2 Score=42.87 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=28.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+-.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34457999999999999999999763 53 68888874
No 185
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=79.47 E-value=2.2 Score=43.64 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=64.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC--CCCHHHHHhcc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~e~V~~v 434 (615)
||.|+|||..|..+|-+|... |+ ...+.|+|.+-=...+-.-+|.+-. .|...... ..+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeEecCCCHHHhCC-
Confidence 799999999999999887652 54 2579999975211111111243321 22211111 0122245665
Q ss_pred CCcEEEEccCCCCC--CC------------HHHHHHHHccCCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQGRT--FT------------KEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~g~--Ft------------eevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|++|=+.+.+.. -| +++++.+++++.+-||+-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8999866665421 12 46788888999999999999997
No 186
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.37 E-value=1.3 Score=44.33 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=60.3
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc---chhhcc-ccCCCCC
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF---KKPWAH-EHEPVKE 426 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~---k~~fA~-~~~~~~~ 426 (615)
+++..+|+|.|| |--|-.|++.|++ .| .+++.++++.--...+...+... ...+.. +..+..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~ 74 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEA 74 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHH
Confidence 345679999999 9888888888765 24 36888887530000000000000 001111 1222346
Q ss_pred HHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHccC-CCcEEE
Q 007156 427 LVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLN-EKPIIF 467 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~-erPIIF 467 (615)
|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 75 l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 75 MEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 8888986679999988775432 3678999988766 455654
No 187
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=79.13 E-value=1.7 Score=45.27 Aligned_cols=120 Identities=20% Similarity=0.225 Sum_probs=66.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc---cccCCCCCHHHH
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---HEHEPVKELVDA 430 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA---~~~~~~~~L~e~ 430 (615)
.+.||+|+|||-+|-.+|+.|.+. .++.++|++ .++ +......+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998887531 368888874 222 222222221 011223468888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCc
Q 007156 431 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 502 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV 502 (615)
+++ +|++|-+. +. .+..+++++-.+ ..=.++-+|.-....+.--++|.+ .|. .+..|.=|+|-
T Consensus 75 l~~--~DvVIn~~-P~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL-PG-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC-CH-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECC-Ch-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 89999763 23 356677665433 223356677622112222344443 353 33355556664
No 188
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=79.12 E-value=3.4 Score=44.41 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=61.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 433 (615)
..||.|+|+|..|..+|..|... |. +++++|+. . +.+....+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988652 53 57888863 1 112222221100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007156 434 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 473 (615)
Q Consensus 434 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 473 (615)
. ++|++| ++.+.+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 588877 44444445677887776543 456778888854
No 189
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.06 E-value=4.3 Score=43.46 Aligned_cols=72 Identities=25% Similarity=0.363 Sum_probs=48.1
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHh
Q 007156 354 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 432 (615)
Q Consensus 354 ~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 432 (615)
.--|++|+|+ |-+|.|-++.+.. .|.. ..++...|.+= ..+.. +| +.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~ 262 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIP 262 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHh
Confidence 3569999999 9999999988864 3531 12566666641 01100 01 2344
Q ss_pred ccCCcEEEEccCC----CCCCCHHHHHHH
Q 007156 433 AIKPTILIGTSGQ----GRTFTKEVVEAM 457 (615)
Q Consensus 433 ~vkPtvLIG~S~~----~g~Fteevv~~M 457 (615)
. .|++||+--. +-++|+|+++.|
T Consensus 263 ~--aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 263 Q--ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp H--SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred h--CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 3 8999998764 568999999988
No 190
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.02 E-value=1.8 Score=42.75 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 53 68888874
No 191
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.78 E-value=2.4 Score=39.36 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=54.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc-----chhhc-cccCCCCCHH
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-----KKPWA-HEHEPVKELV 428 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~-----k~~fA-~~~~~~~~L~ 428 (615)
.+|+|.|| |-.|..+++.|++. .| -++++++++. + ..+.+. ...+. -+..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 77888888877621 35 3688887751 1 012111 00111 1222224577
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEe
Q 007156 429 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFS 468 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFa 468 (615)
++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 77874 899998776543226778888876554556654
No 192
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.68 E-value=4.6 Score=44.04 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHHHHhc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~~ 433 (615)
.+|.|+|+|..|..+|..|... |. +++++|+. . +......+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988753 53 68888874 1 11222211111110 113678898875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007156 434 I-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 473 (615)
Q Consensus 434 v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 473 (615)
+ +||++| ++-+.+...+++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 588776 4444444567788877654 3567888888844
No 193
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=78.55 E-value=6.5 Score=41.79 Aligned_cols=166 Identities=11% Similarity=0.028 Sum_probs=90.7
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ....+ .+ ......+|.
T Consensus 185 ~~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~----~~---~~~~~-~~--G~~~~~~l~ 242 (393)
T 2nac_A 185 HAYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHR----LP---ESVEK-EL--NLTWHATRE 242 (393)
T ss_dssp TCCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CC---HHHHH-HH--TCEECSSHH
T ss_pred CCccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCc----cc---hhhHh-hc--CceecCCHH
Confidence 3678999999999999999999998753 253 688888642 11 10000 00 001124788
Q ss_pred HHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCC--Cc
Q 007156 429 DAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PF 502 (615)
Q Consensus 429 e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~--pV 502 (615)
|+++. .|+++=.- ...++|+++.++.|. +.-+|.=.|.-.---|-.-.+|+ .+|+.--|.--=|. |.
T Consensus 243 ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~ 315 (393)
T 2nac_A 243 DMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPA 315 (393)
T ss_dssp HHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSC
T ss_pred HHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCC
Confidence 98886 89887542 224688899888884 56677777752211111122333 34654333211111 11
Q ss_pred ccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccC
Q 007156 503 EYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 551 (615)
Q Consensus 503 ~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v 551 (615)
. .... --+..|+.+-|=++-....+ ...|...+++-|....
T Consensus 316 ~-~~~p--L~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 316 P-KDHP--WRTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFF 356 (393)
T ss_dssp C-TTCG--GGTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred C-CCCh--hHcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHH
Confidence 0 0111 12456888888885422221 2234445555555544
No 194
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.39 E-value=2.1 Score=46.49 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999998763 54 67788864
No 195
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.23 E-value=2.8 Score=41.74 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..|.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 58888874
No 196
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=78.22 E-value=8.8 Score=39.71 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=62.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCCCCCHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELV 428 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~ 428 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .| -+++.+|+.. .. . .+.. .-...+|.
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~-----~G-------~~V~~~d~~~----~~-~--------~~~~~g~~~~~l~ 214 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQS-----FG-------MKTIGYDPII----SP-E--------VSASFGVQQLPLE 214 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEECSSS----CH-H--------HHHHTTCEECCHH
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHH-----CC-------CEEEEECCCc----ch-h--------hhhhcCceeCCHH
Confidence 568999999999999999999998853 25 3688888641 10 0 1111 00123798
Q ss_pred HHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.- ...++|+++.++.|. +..++.=.|.
T Consensus 215 ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~ar 256 (335)
T 2g76_A 215 EIWPL--CDFITVHTPLLPSTTGLLNDNTFAQCK---KGVRVVNCAR 256 (335)
T ss_dssp HHGGG--CSEEEECCCCCTTTTTSBCHHHHTTSC---TTEEEEECSC
T ss_pred HHHhc--CCEEEEecCCCHHHHHhhCHHHHhhCC---CCcEEEECCC
Confidence 98886 89888542 123578888888884 5667777776
No 197
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=78.11 E-value=1.7 Score=41.39 Aligned_cols=96 Identities=16% Similarity=0.184 Sum_probs=55.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
++-...||.|+|+|..|..+|+.+.. .|. +++++|++- ++ +.. ++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~~----~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TAR----LFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HHH----HSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HHH----HHHcCCceecHHHH
Confidence 33345789999999999999998864 252 688888741 11 111 11110011268888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007156 431 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 474 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 474 (615)
++. +|++|=+.. .. ..+++++ ++...+.-+|.-+||+..
T Consensus 81 ~~~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred HhC--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 875 898884333 32 3455554 332235668888999873
No 198
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=77.84 E-value=6 Score=39.11 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=61.1
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCc---cCccccchhhccccCCCCC
Q 007156 351 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL---ESLQHFKKPWAHEHEPVKE 426 (615)
Q Consensus 351 ~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~---~~L~~~k~~fA~~~~~~~~ 426 (615)
+++++.+|+|.|| |-.|..+++.|++ .| -+++++|+.. .... ..+... ..+.-+..+..+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~~v-~~~~~Dl~d~~~ 79 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVAGL-SVIEGSVTDAGL 79 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCTTE-EEEECCTTCHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccCCc-eEEEeeCCCHHH
Confidence 4577889999998 7777777777653 24 3688888741 1100 011000 011112222235
Q ss_pred HHHHHhccCCcEEEEccCCCCC-C------------CHHHHHHHHccCCCcEEEecC
Q 007156 427 LVDAVNAIKPTILIGTSGQGRT-F------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~-F------------teevv~~Ma~~~erPIIFaLS 470 (615)
+.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 80 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 80 LERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 7778876679999988876532 0 345677776655567888544
No 199
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.82 E-value=2.3 Score=41.75 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=25.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998864 252 68888874
No 200
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.79 E-value=3.3 Score=39.76 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=46.3
Q ss_pred CCCCceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----------
Q 007156 352 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---------- 419 (615)
Q Consensus 352 ~L~d~riv~~GA-Gs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~---------- 419 (615)
.++++++||.|| |+ .|..+|+.|++ .| -+++++|++- +.+...++.+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 88888888765 35 3688888741 112222222211
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 420 -EHEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 420 -~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
|..+..++.++++.+ +.|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111223455666655 799999877654
No 201
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.76 E-value=2.2 Score=42.07 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..|... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357888874
No 202
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=77.65 E-value=2.2 Score=37.91 Aligned_cols=34 Identities=6% Similarity=0.137 Sum_probs=27.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+.+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 35689999999999999998865 24 468889885
No 203
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=77.58 E-value=1.6 Score=45.58 Aligned_cols=107 Identities=15% Similarity=0.293 Sum_probs=64.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc-cCCCCCHHHH
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDA 430 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~ 430 (615)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966554 365 247999997411001100113332 12110 0012578899
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcE-EEecCCCC
Q 007156 431 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 473 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 473 (615)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 89888554433 21 23466777888888885 88899997
No 204
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=77.45 E-value=4.9 Score=40.23 Aligned_cols=101 Identities=14% Similarity=0.191 Sum_probs=58.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccc--hhhc-cccCCCCCHHHHHh
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--KPWA-HEHEPVKELVDAVN 432 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k--~~fA-~~~~~~~~L~e~V~ 432 (615)
.||.|+|||+-|..+|..|... | .+++++|+.-+ ..=+...+.-.. ..+- ++..-..++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999888653 4 36888887531 000000111000 0000 00011135544 44
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCCC
Q 007156 433 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 474 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPts 474 (615)
.+|++| ++... ...+++++.++.+ .+..+|+.+.|-..
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 478877 55544 3477899998764 45678888999864
No 205
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=76.98 E-value=1.2 Score=46.21 Aligned_cols=118 Identities=17% Similarity=0.232 Sum_probs=70.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVD 429 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e 429 (615)
+....||.++|||..|.++|-.|+.. |+ ...+.|+|.+-=..++-.-+|.+.. .|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~~-~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHGS-LFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHTG-GGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhhh-hccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 2589999974110011001133221 232110 0113443
Q ss_pred HHhccCCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcc
Q 007156 430 AVNAIKPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 486 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~w 486 (615)
+++. .|++|=+.+.+ | +| -+++++.|++++..-+|+-.|||.. +..+-+++.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---i~t~~~~k~ 149 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD---ILTYVAWKI 149 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH---HHHHHHHHH
Confidence 4665 89887444433 3 12 2477888889999999999999983 333444444
No 206
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=76.90 E-value=8.3 Score=40.22 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=96.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. . . + ..... ......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~--~--~-~---~~~~~---g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRA-----FGM-------NVLVWGREN--S--K-E---RARAD---GFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSHH--H--H-H---HHHHT---TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEECCCC--C--H-H---HHHhc---CceEeCCHHH
Confidence 567899999999999999999998854 264 688888742 0 0 0 00000 0011258999
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEE------EeeCCCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI------FASGSPF 499 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~Grai------fASGSPF 499 (615)
+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-..--|---.+|++ +|+.- |.. -|.
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl 283 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPI 283 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCC
Confidence 9987 89887532 234689999999884 677888888744334444445554 34432 211 122
Q ss_pred CCcccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 500 DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 500 ~pV~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
++ .. .--+..|+.+-|=+|-..- .--+.|...+++-|.....
T Consensus 284 ~~----~~--pL~~~~nvilTPHia~~t~-----e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 284 LQ----GH--TLLRMENCICTPHIGYVER-----ESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CS----CC--GGGGCTTEEECCSCTTCBH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CC----CC--hhhcCCCEEECCCCCCCCH-----HHHHHHHHHHHHHHHHHHc
Confidence 10 00 1124568999998742111 1224566666777766654
No 207
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=76.51 E-value=16 Score=37.63 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=64.6
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHH
Q 007156 349 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 349 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
.+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .. . .++. ..+|.
T Consensus 139 ~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~--~~---~-~~~~----~~~l~ 192 (333)
T 1dxy_A 139 IGKELGQQTVGVMGTGHIGQVAIKLFKG-----FGA-------KVIAYDPYP----MK--GD---H-PDFD----YVSLE 192 (333)
T ss_dssp CCCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CS--SC---C-TTCE----ECCHH
T ss_pred CccCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---H-hccc----cCCHH
Confidence 4568999999999999999999998864 253 688888752 11 11 1 1121 23788
Q ss_pred HHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.-- ..++|+++.++.|. +.-++.=.|.
T Consensus 193 ell~~--aDvV~~~~P~~~~t~~li~~~~l~~mk---~ga~lIn~sr 234 (333)
T 1dxy_A 193 DLFKQ--SDVIDLHVPGIEQNTHIINEAAFNLMK---PGAIVINTAR 234 (333)
T ss_dssp HHHHH--CSEEEECCCCCGGGTTSBCHHHHHHSC---TTEEEEECSC
T ss_pred HHHhc--CCEEEEcCCCchhHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 99986 898885422 23688999999985 5667776665
No 208
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=76.46 E-value=14 Score=37.97 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=64.2
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. . ..+ ..++. ...+|.|
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~--~~~----~~~~~---~~~~l~e 195 (333)
T 1j4a_A 141 GREVRDQVVGVVGTGHIGQVFMQIMEG-----FGA-------KVITYDIFR----N--PEL----EKKGY---YVDSLDD 195 (333)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----C--HHH----HHTTC---BCSCHHH
T ss_pred cccCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----c--hhH----HhhCe---ecCCHHH
Confidence 457889999999999999999998864 254 688888742 1 101 11221 1237999
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007156 430 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNP 472 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNP 472 (615)
+++. .|+++=.-. ..++|+++.++.|. +..++.-.|.-
T Consensus 196 ll~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lIn~arg 237 (333)
T 1j4a_A 196 LYKQ--ADVISLHVPDVPANVHMINDESIAKMK---QDVVIVNVSRG 237 (333)
T ss_dssp HHHH--CSEEEECSCCCGGGTTCBSHHHHHHSC---TTEEEEECSCG
T ss_pred HHhh--CCEEEEcCCCcHHHHHHHhHHHHhhCC---CCcEEEECCCC
Confidence 9986 898885422 23678889998884 56677777763
No 209
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.40 E-value=5 Score=37.62 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=55.4
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch-hhcc-ccCCCCCH
Q 007156 351 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH-EHEPVKEL 427 (615)
Q Consensus 351 ~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~-~fA~-~~~~~~~L 427 (615)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. ++.+.+..... .+.. +.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4678899999998 8888888888765 25 3788888751 11111111111 1111 111 456
Q ss_pred HHHHhccCCcEEEEccCCCCC------------CCHHHHHHHHccCCCcEEEecC
Q 007156 428 VDAVNAIKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 79 ~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 79 SHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 66666 49999977765421 0345666665555455666444
No 210
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=76.35 E-value=9.3 Score=37.80 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc-chhhc-cccCCCCCHH
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWA-HEHEPVKELV 428 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~-k~~fA-~~~~~~~~L~ 428 (615)
.++..+|+|.|| |-.|..+++.|++ .| .+++++|+.. ....+.+... +..+. -+..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 7777777777754 25 4788888752 1111112111 11111 1222223577
Q ss_pred HHHhccCCcEEEEccCCCCCC-------------CHHHHHHHHccCCCcEEEecC
Q 007156 429 DAVNAIKPTILIGTSGQGRTF-------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~F-------------teevv~~Ma~~~erPIIFaLS 470 (615)
++++..++|++|=+.+....- +..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 788877899999887754320 345777776655567888543
No 211
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=76.30 E-value=6.7 Score=39.47 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999999764 52 478898884
No 212
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=76.26 E-value=2.3 Score=42.39 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-||+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 475 46677754
No 213
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=76.13 E-value=1.3 Score=46.27 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=72.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc--CCCCCHHHHHh
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 432 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~ 432 (615)
..||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988753 54 257999997311001000113222 1232211 01134443 55
Q ss_pred ccCCcEEEEccCC---CC-----CC------CHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCC---cEEEee
Q 007156 433 AIKPTILIGTSGQ---GR-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG---RAIFAS 495 (615)
Q Consensus 433 ~vkPtvLIG~S~~---~g-----~F------teevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~G---raifAS 495 (615)
. .|++|=+.+. +| +| -+++++.+.+++..-+|+-.|||.. ....-+++.+ | +-+|.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh-CCCHHHeecc
Confidence 4 8988833333 33 12 2567788889999999999999972 3344455544 2 335555
Q ss_pred C
Q 007156 496 G 496 (615)
Q Consensus 496 G 496 (615)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 4
No 214
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=75.95 E-value=2.8 Score=47.44 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=32.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|.+.||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46789999999999999999999875 75 799999987
No 215
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.33 E-value=1.9 Score=41.71 Aligned_cols=97 Identities=13% Similarity=0.203 Sum_probs=56.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
+..||+|.|||-.|..+++.|++ .| -+++.++++- +.+.+.-..+.-+..+..++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 34689999999888888888865 25 3677777641 11211111111122222345555654
Q ss_pred cCCcEEEEccCCCC-----------CCCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGR-----------TFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g-----------~Fteevv~~Ma~~~erPIIFaLS 470 (615)
++|++|=+.+... ..+..+++++.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997664321 01566777777655567887544
No 216
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.57 E-value=3.1 Score=41.46 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..||.|+|+|..|.++|..|.. .|. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3589999999999999998864 253 57888874
No 217
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.49 E-value=5.7 Score=40.31 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=53.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH-HHhc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD-AVNA 433 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e-~V~~ 433 (615)
-.||.|+|+|..|..+|..|... |. ..+++++|++- +.+...++.-+. .....++.| +++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS 94 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc
Confidence 37999999999999999988753 64 14799988741 111111100000 001134555 6654
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLS 470 (615)
+|++| ++.+.. -.+++++.+..+ .+.-||.-.+
T Consensus 95 --aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 --PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred --CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77776 444443 346677666543 3445555444
No 218
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=74.37 E-value=18 Score=38.11 Aligned_cols=115 Identities=10% Similarity=0.117 Sum_probs=64.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
.++.+||+|+|.|-+|++.|+.|.+ .|. ++...|++-..... ..|. .-..+-..+ .. .+.+
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g~---~~-~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTGS---LN-DEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEESS---CC-HHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEECC---Cc-HHHh
Confidence 3567899999999999999876643 363 67788885321100 1121 111110000 12 5667
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccCCee
Q 007156 432 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNV 508 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~G~~ 508 (615)
+ .+|.+|=.++.+- -.+++..+.. ...|++ +. .|-++...+.+.|--||| ||||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~-------~~----~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV-------GD----IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE-------CH----HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE-------EH----HHHHHHhcCCCEEEEECC-------CCHH
Confidence 6 4888775555442 2566665443 233443 11 233444456788888997 7874
No 219
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=74.31 E-value=16 Score=37.71 Aligned_cols=86 Identities=19% Similarity=0.292 Sum_probs=45.4
Q ss_pred HHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccc
Q 007156 342 LISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE 420 (615)
Q Consensus 342 ll~Alr~~g-~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~ 420 (615)
.+.|+.... ..-.+++|+|+|||..|...+.+... .|. ++++.+|+. ..| ++-.++-=|..
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~----~~~---~~~~~~lGa~~ 261 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS----EVR---RNLAKELGADH 261 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----HHH---HHHHHHHTCSE
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHcCCCE
Confidence 344443333 34467899999999877665544432 363 578888753 111 11111111111
Q ss_pred --cCCCCCHHHHHhc----cCCcEEEEccCC
Q 007156 421 --HEPVKELVDAVNA----IKPTILIGTSGQ 445 (615)
Q Consensus 421 --~~~~~~L~e~V~~----vkPtvLIG~S~~ 445 (615)
.....++.+.|+. -+.|+.|-+++.
T Consensus 262 vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 262 VIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp EECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred EEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 0111355555554 368999887764
No 220
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=74.17 E-value=4.5 Score=37.43 Aligned_cols=95 Identities=9% Similarity=0.170 Sum_probs=53.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
.||+|.|| |-.|..+++.|++ .| .+++++|++.- +.+.+...-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE----KIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG----GCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc----cchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666666653 24 47888888521 1111211111111122223457788875
Q ss_pred CCcEEEEccCCCC----------CCCHHHHHHHHccCCCcEEEe
Q 007156 435 KPTILIGTSGQGR----------TFTKEVVEAMASLNEKPIIFS 468 (615)
Q Consensus 435 kPtvLIG~S~~~g----------~Fteevv~~Ma~~~erPIIFa 468 (615)
+|++|=+.+... ..+..++++|.+..-+-+||.
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999998765431 014456777766555556664
No 221
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.03 E-value=3.8 Score=39.94 Aligned_cols=30 Identities=20% Similarity=0.365 Sum_probs=24.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 397 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD 397 (615)
.||.|+|+|..|..+|..|... | -+++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----G-------HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----T-------CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----C-------CEEEEEc
Confidence 4899999999999999988642 5 2577777
No 222
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=73.91 E-value=9.7 Score=39.48 Aligned_cols=85 Identities=19% Similarity=0.349 Sum_probs=66.4
Q ss_pred cchHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc
Q 007156 333 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 411 (615)
Q Consensus 333 GTAaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~ 411 (615)
+-.-+|-.|++--|+..+.+|+..++|++|.+. .|.-+|-||.. .| ..+.++.++
T Consensus 157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~-------ATVTi~Hs~------------ 212 (303)
T 4b4u_A 157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----AN-------ATVTICHSR------------ 212 (303)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT------------
T ss_pred cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cC-------CEEEEecCC------------
Confidence 444567788999999999999999999999765 57777777754 24 245555442
Q ss_pred ccchhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 007156 412 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 455 (615)
Q Consensus 412 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~ 455 (615)
.++|.+.+++ +|++|...+.++.++.|+|+
T Consensus 213 ------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 ------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp ------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred ------------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1358888886 99999999999999999986
No 223
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=73.82 E-value=25 Score=37.30 Aligned_cols=91 Identities=16% Similarity=0.211 Sum_probs=63.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
+..|.+.++.|+|-|..|..+|+.+.. .|+ +++.+|+..- ..+. -+ ....+|.|
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~e 193 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAES-----LGM-------YVYFYDIENK------LPLG-----NA---TQVQHLSD 193 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCC------CCCT-----TC---EECSCHHH
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEEcCCch------hccC-----Cc---eecCCHHH
Confidence 568999999999999999999998864 264 6888887421 1010 01 11247999
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
+++. .|+++=.- ...++|+++.+..|. +.-++.=.|.
T Consensus 194 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIN~aR 234 (404)
T 1sc6_A 194 LLNM--SDVVSLHVPENPSTKNMMGAKEISLMK---PGSLLINASR 234 (404)
T ss_dssp HHHH--CSEEEECCCSSTTTTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred HHhc--CCEEEEccCCChHHHHHhhHHHHhhcC---CCeEEEECCC
Confidence 9987 88887542 223688999998884 5667777775
No 224
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=73.73 E-value=8.4 Score=38.02 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 351 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 351 ~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+...+ -+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~~~----~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEEVV----GSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSEEE----SCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccEEe----cCcCCHHHHHH
Confidence 4577889999998 8888888888765 25 3678887742 11 1121111 12222245778
Q ss_pred HHhccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecC
Q 007156 430 AVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 470 (615)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999887654211 245788888777778888655
No 225
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=73.72 E-value=3.7 Score=40.40 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
.||.|+|+ |..|..+|..|.. .| -+++++|+. . +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~----~---~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIA----P---EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCS----H---HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECC----H---HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998864 25 368888874 1 11211111 1 0111245566764
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 473 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 473 (615)
+|++|= +..... .+++++.+... .+..+|.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 888883 333333 68888888754 3456777788854
No 226
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=73.66 E-value=2.8 Score=41.05 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=25.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..|.. .| .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AG-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 489999999999999998864 24 258888874
No 227
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=73.65 E-value=4.8 Score=41.36 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=65.3
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCC--CCCHHHHHhc
Q 007156 357 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNA 433 (615)
Q Consensus 357 riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~e~V~~ 433 (615)
||.|+| +|..|..+|-+|... .++ ...+.|+|.+-. ..+..-+|.+. ++-..... ..+..++++.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998877542 233 268999999741 11111123322 11000000 0246678887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007156 434 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 434 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
.|+.|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888665543 21 1246777888899999999999998
No 228
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=73.49 E-value=7.7 Score=39.97 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=93.5
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+... . ....+..-+ ...+|.|
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~e 196 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQG-----WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSE 196 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTT-----SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHH
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHH
Confidence 567899999999999999999998743 354 6888887531 1 111110001 1237999
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEeeCCCCCCcccC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYG 505 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifASGSPF~pV~~~ 505 (615)
+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-..--|---.+|+ .+|+.-.|-=-=|++-.+
T Consensus 197 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~- 268 (330)
T 4e5n_A 197 LFAS--SDFILLALPLNADTLHLVNAELLALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW- 268 (330)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-
T ss_pred HHhh--CCEEEEcCCCCHHHHHHhCHHHHhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-
Confidence 9987 88887542 234689999998884 67788877763322222223333 345544332111111100
Q ss_pred CeeeCc-------CCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccCC
Q 007156 506 DNVFVP-------GQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 552 (615)
Q Consensus 506 G~~~~p-------~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 552 (615)
.....| -+..|+.+-|=++-.. ..-.+.|...+++-|.....
T Consensus 269 ~~~~~Pl~~~~~L~~~~nvilTPHia~~t-----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 269 ARADRPQQIDPALLAHPNTLFTPHIGSAV-----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp TCTTCCSSCCHHHHTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCCchHHcCCCEEECCcCCCCh-----HHHHHHHHHHHHHHHHHHHc
Confidence 000112 1345788888775321 11234566666666666554
No 229
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=73.22 E-value=23 Score=36.74 Aligned_cols=161 Identities=15% Similarity=0.159 Sum_probs=93.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .. .+.+ ......+|.|+
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~el 220 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDL 220 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHH
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHH
Confidence 57899999999999999999998853 354 688888641 11 01 0111 00112478898
Q ss_pred HhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCCcEEEe-----eCCCCCC
Q 007156 431 VNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDP 501 (615)
Q Consensus 431 V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~GraifA-----SGSPF~p 501 (615)
++. .|+++=.- ...++++++.++.|. +.-++.=.|.=..--|..-.+|++ +|+.-.| ..-|++
T Consensus 221 l~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~- 292 (347)
T 1mx3_A 221 LFH--SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFS- 292 (347)
T ss_dssp HHH--CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCC-
T ss_pred Hhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCC-
Confidence 886 89887532 234678888888884 566888777643222322233433 4544322 222321
Q ss_pred cccCCeeeCcCCCccccccchhhHHHHHcCCcccCHHHHHHHHHHHHccC
Q 007156 502 FEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 551 (615)
Q Consensus 502 V~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v 551 (615)
..+.. --..+|+.+-|=++-. .....+.|...+++-+....
T Consensus 293 --~~~~~--L~~~~nvi~tPHia~~-----t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 293 --FSQGP--LKDAPNLICTPHAAWY-----SEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp --TTSST--TTTCSSEEECSSCTTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCch--HHhCCCEEEEchHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 11111 1247899999988632 22223455556666665554
No 230
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.20 E-value=10 Score=38.09 Aligned_cols=87 Identities=20% Similarity=0.264 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh
Q 007156 338 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW 417 (615)
Q Consensus 338 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f 417 (615)
.++..+.+++....- ..++|+|+|||..|...+.+... .|. ++++.+|+. ..| ++..++-
T Consensus 149 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l- 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY- 208 (343)
T ss_dssp HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT-
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh-
Confidence 344445666622333 88999999998877766655432 353 478888863 111 2222221
Q ss_pred cccc--CCCCCHHHHHhcc---CCcEEEEccC
Q 007156 418 AHEH--EPVKELVDAVNAI---KPTILIGTSG 444 (615)
Q Consensus 418 A~~~--~~~~~L~e~V~~v---kPtvLIG~S~ 444 (615)
|... ....++.+.++.. +.|++|=+++
T Consensus 209 a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 209 ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 3211 1113566666532 6788887766
No 231
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=73.02 E-value=2.9 Score=41.47 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=28.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|+|+|||.||+..|..|.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998864 353 2799999874
No 232
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=72.76 E-value=7.6 Score=37.91 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=57.6
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc----chhhcc-ccCCCCCH
Q 007156 354 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKEL 427 (615)
Q Consensus 354 ~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~L 427 (615)
++.+|+|.|| |-.|..+++.|++ .| -+++++|++.--.. ...+... +..+.. +..+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4578999998 7788888877764 25 36888887521000 0001100 011111 11222357
Q ss_pred HHHHhccCCcEEEEccCCCCC------C----------CHHHHHHHHccCC-CcEEEecC
Q 007156 428 VDAVNAIKPTILIGTSGQGRT------F----------TKEVVEAMASLNE-KPIIFSLS 470 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g~------F----------teevv~~Ma~~~e-rPIIFaLS 470 (615)
.++++.+++|++|=+.+.... + +..+++++.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888889999988875421 0 2345555554443 67887644
No 233
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=72.47 E-value=12 Score=38.20 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=61.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc-CCccccCCccCccccchhhccccCCCCCHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS-KGLIVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~-~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
+..|.+.+|.|+|.|..|-.+|+.+.. .| -+++.+|+ .. . . . ..+..-+ ....++.
T Consensus 141 ~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~G-------~~V~~~d~~~~----~--~-~-~~~~~g~---~~~~~l~ 197 (320)
T 1gdh_A 141 GEKLDNKTLGIYGFGSIGQALAKRAQG-----FD-------MDIDYFDTHRA----S--S-S-DEASYQA---TFHDSLD 197 (320)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEECSSCC----C--H-H-HHHHHTC---EECSSHH
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEECCCCc----C--h-h-hhhhcCc---EEcCCHH
Confidence 457899999999999999999998853 25 36888887 42 0 0 0 0000001 1123788
Q ss_pred HHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 429 DAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
|+++. .|+++=.-- ..++++++.++.|. +.-+|.-.|.
T Consensus 198 ell~~--aDvVil~~p~~~~t~~~i~~~~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 198 SLLSV--SQFFSLNAPSTPETRYFFNKATIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHHHH--CSEEEECCCCCTTTTTCBSHHHHTTSC---TTEEEEECSC
T ss_pred HHHhh--CCEEEEeccCchHHHhhcCHHHHhhCC---CCcEEEECCC
Confidence 98886 888874421 23578888888774 5567777775
No 234
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.20 E-value=2.5 Score=37.30 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 479999999999999998865 25 368999984
No 235
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=71.98 E-value=20 Score=35.71 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=61.5
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc-cchhhcc-ccC-CCCCH
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHE-PVKEL 427 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~-~k~~fA~-~~~-~~~~L 427 (615)
.+...||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. ....+.. +.. +...+
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999996 88888888887653 13 4788888742 11111111 1111211 222 23457
Q ss_pred HHHHhccCCcEEEEccCCCC----------------CCCHHHHHHHHccCCCcEEEecC
Q 007156 428 VDAVNAIKPTILIGTSGQGR----------------TFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g----------------~Fteevv~~Ma~~~erPIIFaLS 470 (615)
.++++. +|++|=+.+... .-|..+++++.+.+ +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778875 999997666432 22567899888777 88998655
No 236
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=71.73 E-value=1.7 Score=44.90 Aligned_cols=151 Identities=14% Similarity=0.192 Sum_probs=77.6
Q ss_pred CCccccccCCcchHHHHhccCCCCCeeEEEEeeCcccccCCCCCCcccccchhhHHHHhhhcCCCCCceeeeeecCCCCc
Q 007156 209 PQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNN 288 (615)
Q Consensus 209 p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnn 288 (615)
|||..++--|-|++. ..+..++.+|||.+.=| |.--+. -=||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~~~------~~~~Mki~IvTDSt~dL------------~~e~~~----~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQQM------GRGSMNIAVVTDSTAYI------------PKEMRE----QHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHHH----HHTEE---EECCEEECS--S
T ss_pred cCccccccccchhhh------CcCCCcEEEEEECCCCC------------CHHHHH----hCCeE---EEeEEEEEC--C
Confidence 677666655555432 23335799999998622 221111 12677 888888885 3
Q ss_pred ccccc------Ccccccccc----cCCChhhHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHhCCCCCCceE
Q 007156 289 EKLLD------DEFYIGLRQ----KRAIGQEYAELLHEFMTAVKQNYGERILIQGTASVVLAGLISAMKFLGGSLADQRF 358 (615)
Q Consensus 289 e~LL~------Dp~YlGlr~----~Ri~g~ey~~~vdeFv~Av~~~~gp~vliQGTAaVvLAgll~Alr~~g~~L~d~ri 358 (615)
++..+ +.||--++. +.-+.+.-.+|++-|-+.+++ + ..++.- |=+-.|.|-+++.+.....+.+.+|
T Consensus 69 ~~Y~D~~di~~~efy~~m~~~~~~p~TSqPs~~~~~~~fe~l~~~-~-~~Ii~I-~iSS~LSGTy~sA~~Aa~~~~~~~I 145 (315)
T 3fys_A 69 ETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKS-Y-DAVISI-HLSSGISGTFSSAAAADSMVDNIDV 145 (315)
T ss_dssp CEEEBTTTBCHHHHHHHHHTTTCCCEEECCCHHHHHHHHHHHTTT-C-SEEEEE-ESCTTTCSHHHHHHHGGGGCSSCEE
T ss_pred EEEECCCCCCHHHHHHHHHhCCCCcccCCCCHHHHHHHHHHHHhc-C-CcEEEE-eCCCcHhHHHHHHHHHHHhCCCCCE
Confidence 33333 456654442 233445555666566444443 5 555540 0111234445555555556677899
Q ss_pred EEeCcChHHHHHHHHHHHHH-HHhcCC-Chhhh
Q 007156 359 LFLGAGEAGTGIAELIALEI-SKQTNM-PLEET 389 (615)
Q Consensus 359 v~~GAGsAG~GIA~ll~~~~-~~~~Gl-s~eeA 389 (615)
-++=..+++.|..-++..+. ..++|. |.||.
T Consensus 146 ~ViDS~~~s~g~g~lv~~Aa~l~~~G~~s~eeI 178 (315)
T 3fys_A 146 YPFDSEISCLAQGFYALKAAELIKNGASSPEDI 178 (315)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred EEECCchhHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99988888888877776653 234699 98874
No 237
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=71.55 E-value=1.9 Score=44.71 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=68.1
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC---ccccCCccCccccchhhccccCCCCCHHHHH
Q 007156 356 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG---LIVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 356 ~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G---Li~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
.||++.| ||..|..+|-+|+. .|+--++-.-.+.|+|.+. .+.-.. -+|.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a-~DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVL-MELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhH-hhhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999999888864 2441110111399999853 211111 124443334443322235688888
Q ss_pred hccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcE-EEecCCCC
Q 007156 432 NAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 473 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 473 (615)
+. .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 87 89888555433 21 24678888888888774 88899997
No 238
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=71.30 E-value=2.8 Score=40.77 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4589999999999999998864 353 689999864
No 239
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=71.15 E-value=6.2 Score=38.48 Aligned_cols=79 Identities=11% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCCCceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc------cccC
Q 007156 352 SLADQRFLFLGAG-E--AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HEHE 422 (615)
Q Consensus 352 ~L~d~riv~~GAG-s--AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA------~~~~ 422 (615)
.+++.++||.||. . .|.++|+.|++ .| -+++++|+.-+ .+.+.+.+..+. -|..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~-----~~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF-----KDRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC-----HHHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH-----HHHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 56666666654 35 36889888641 011222211111 1222
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCCC
Q 007156 423 PVKELVDAVNAI-----KPTILIGTSGQGR 447 (615)
Q Consensus 423 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 447 (615)
+..++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455556554 7999998877653
No 240
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=71.15 E-value=3.6 Score=39.15 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999998865 35 378999974
No 241
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=71.13 E-value=3.8 Score=42.15 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=29.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
++|||+|||.||+..|..|.+ .|.. .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999999865 3542 379999987533
No 242
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.09 E-value=3 Score=43.57 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 243
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.76 E-value=6.4 Score=38.29 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=56.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|+|..|..+|..+.. .|. ..+++++|++. +.+...++.-... ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGF-----KGKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCC-----CcEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998864 253 13788888741 1111111000000 012356667762 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 473 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 473 (615)
+|++| ++.+. -.+.++++.+..+ .+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88877 44433 2466777776543 3456777777744
No 244
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=70.62 E-value=18 Score=37.37 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=71.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ +.. .... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~~~---~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-EDL---KEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-HHH---HHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-hhh---hhcC----ceecCHHH
Confidence 5678899999999999999999888542 54 57778863 11 111 1111 11257999
Q ss_pred HHhccCCcEEEEc----cCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcc--cCCcEEEe
Q 007156 430 AVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW--SQGRAIFA 494 (615)
Q Consensus 430 ~V~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~w--T~GraifA 494 (615)
.++. .|+++=. ....++|+++.++.|. +..++.=.| +-++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~a----RG~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA----RGKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS----CGGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecC----ccccccHHHHHHHHHhCCceEE
Confidence 9987 8888743 2334799999999995 455666443 455555544321 35654433
No 245
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=70.50 E-value=13 Score=36.18 Aligned_cols=93 Identities=12% Similarity=0.220 Sum_probs=58.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHHHhc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~V~~ 433 (615)
.||+|.|| |-.|..+++.|++ .| .+++.+|+. .+... +. ...+. -+.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888888765 25 368888886 22211 22 11111 1222 345677777
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++|++|=+.+..+. -+..+++++.+.+-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988776432 1467888888776666888543
No 246
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=70.40 E-value=5.5 Score=39.79 Aligned_cols=93 Identities=16% Similarity=0.229 Sum_probs=54.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc---c--------cc-CC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---H--------EH-EP 423 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA---~--------~~-~~ 423 (615)
.||.|+|+|..|..+|..|.. .| .+++++|++.- .+...++... . .. ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 589999999999999998864 24 35888887421 1111111000 0 00 01
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCC
Q 007156 424 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSN 471 (615)
Q Consensus 424 ~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSN 471 (615)
..++.++++. +|++|=+.. . -..+++++.++.+. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2468787764 887773332 2 23588888886543 3455666644
No 247
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=70.28 E-value=3.1 Score=47.36 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=31.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 688999999999999999998764 75 799999987
No 248
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=70.22 E-value=3.7 Score=40.51 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=24.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999988865 375 46777764
No 249
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=70.09 E-value=4 Score=39.48 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|||+|||.||+..|..|.+ .| .++.++|+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQ-------ASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEEcC
Confidence 589999999999999988865 25 368899986
No 250
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=70.03 E-value=4.5 Score=41.91 Aligned_cols=37 Identities=27% Similarity=0.422 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3458999999999999999981 122 579999886543
No 251
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=69.93 E-value=3.9 Score=44.10 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhCcccc--c-ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc
Q 007156 314 LHEFMTAVKQNYGERIL--I-QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETR 390 (615)
Q Consensus 314 vdeFv~Av~~~~gp~vl--i-QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeAr 390 (615)
.|+|+.++.+.+|.++- | +-.+ -++.++.-....|...|++|+|-+.-..++++.|.+ .|+..
T Consensus 274 T~~~l~~la~~~g~~~~~~i~~er~-----r~~~~~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v---- 339 (458)
T 3pdi_B 274 VDAWLMALAEISGNPVPDRYKRQRA-----QLQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAHT---- 339 (458)
T ss_dssp HHHHHHHHHHHHSSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE----
T ss_pred HHHHHHHHHHHHCCchHHHHHHHHH-----HHHHHHHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE----
Confidence 46788888888875421 1 1111 122332223345778999999999999999998843 47632
Q ss_pred CeEEEEccCCccccCCccCccccchhhccc-cCCCCCHHHHHhccCCcEEEEccC
Q 007156 391 KKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSG 444 (615)
Q Consensus 391 k~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~ 444 (615)
+.++-.. ..+.+... +...- ..+...+++.++..+||.+||-|-
T Consensus 340 --v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 340 --VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp --EEEEESS------CCSCCTTT--TSSCEEESHHHHHHHHHHHHTCSEEEECTT
T ss_pred --EEEEECC------CChhhhhC--ccCcEEeCCHHHHHHHHHhcCCCEEEEChh
Confidence 2222111 11111110 00000 011224777888899999999654
No 252
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.75 E-value=4 Score=41.38 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|.++|..|... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998753 41 368888875
No 253
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=69.49 E-value=4.1 Score=39.16 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|+|+|||.||+..|..|.+ .| .++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YM-------LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CC-------CcEEEEecc
Confidence 4689999999999999988865 25 358999997
No 254
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=69.39 E-value=4.5 Score=40.88 Aligned_cols=38 Identities=18% Similarity=0.111 Sum_probs=28.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+.+..+|+|+|||.||+..|..|.+ .| .++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G-------~~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NG-------WDVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecCCC
Confidence 3456799999999999999988865 35 36888887543
No 255
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=68.95 E-value=18 Score=36.72 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=26.1
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007156 428 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 428 ~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 471 (615)
...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 4567888999999986643 111222345567899975555
No 256
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=68.92 E-value=3.7 Score=38.66 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=51.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc-chhhcc-ccCCCCCHHHH-Hhc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELVDA-VNA 433 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~e~-V~~ 433 (615)
||+|+|+|..|..+|+.|... | .+++++|++ .++-+.+.+. ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999988652 4 468899874 1111111110 001111 11111235444 33
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHc-cCCCcEEEecCC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSN 471 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSN 471 (615)
++|++|-+.... .....+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 589998665532 22233444444 356666666655
No 257
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=68.61 E-value=4.2 Score=39.75 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|+|+|||.||+..|..|.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3689999864
No 258
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=67.96 E-value=10 Score=36.17 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=56.0
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
.+...||+|.|| |-.|..+++.|++ .|.. ...+. ..+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~--------------~~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDW--------------VFVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEE--------------EECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---ccccc--------------cccCcee----cccCCHHHHHHH
Confidence 467789999996 8888888887764 3530 00000 0010001 011122457888
Q ss_pred HhccCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 431 VNAIKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 988899999988776431 1234688887766667888544
No 259
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=67.72 E-value=18 Score=35.12 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=54.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 7777777777653 23 344444321 11111111111111113334 67888888 5
Q ss_pred CcEEEEccCCCCC-C---------------CHHHHHHHHccCCCcEEEecC
Q 007156 436 PTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 436 PtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 470 (615)
+|++|-+.+.... . +..++++|.+.+-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778887777778998655
No 260
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.63 E-value=5.4 Score=38.04 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=45.3
Q ss_pred CCCCCCceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc------cc
Q 007156 350 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HE 420 (615)
Q Consensus 350 g~~L~d~riv~~GAG---sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA------~~ 420 (615)
..++++.++||.||+ -.|.++|+.|++ .| -+++++|+..- ..+.+.+..+.+. -|
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGDR----FKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSGG----GHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecchh----hHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 455566666654 35 36888887621 1111222111111 11
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 421 HEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 421 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..+..++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 12223455555554 789999777654
No 261
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=67.47 E-value=4.8 Score=41.17 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|||+|||.||+..|..|.+... .| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 12 4788888664
No 262
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=67.44 E-value=4.8 Score=42.09 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=31.6
Q ss_pred HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 348 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 348 ~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988865 25 36888887644
No 263
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.26 E-value=5.2 Score=35.83 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-+++|+|+|.+|+-.|..|.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 4 478899875
No 264
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=67.15 E-value=3.6 Score=39.88 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|||+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999998865 253 58889984
No 265
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=67.10 E-value=15 Score=36.58 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+| +|..|..+|..|.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 68888864
No 266
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=67.04 E-value=6.7 Score=37.73 Aligned_cols=86 Identities=12% Similarity=0.263 Sum_probs=54.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
||+|.|| |-.|..+++.|+ . | .+++.+|+..-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899998 888877777764 2 3 4688888753111 011111235778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 436 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 436 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+|++|=+.+.... .+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999998875431 14566777665444 5887544
No 267
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=66.82 E-value=14 Score=35.83 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=43.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++.- .+......+.-|..+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999854 344444444443 36 36888886421 111111112122222234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 007156 430 AVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 430 ~V~~v-----kPtvLIG~S~~~ 446 (615)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66555 799999777653
No 268
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=66.71 E-value=5.2 Score=39.19 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G-------~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GG-------HEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999998865 36 368999987
No 269
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=66.40 E-value=9 Score=36.80 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=24.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
||.|+|+|..|..+|..|... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999998652 53 5777665
No 270
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=66.34 E-value=4.7 Score=41.52 Aligned_cols=38 Identities=13% Similarity=0.287 Sum_probs=29.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35689999999999999999865 3542 36999988643
No 271
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=66.08 E-value=14 Score=36.07 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 433 (615)
.+|+|.|| |-.|..+++.|++ .| -+++.+|+.- ....+.+.. ...+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7778778777764 25 3688887641 111111211 111111 22222357777875
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
.++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677776665567888544
No 272
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=65.83 E-value=5.4 Score=40.67 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999988864 363 688898864
No 273
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=65.77 E-value=6.5 Score=40.01 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=27.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45689999999999999998865 364 57777765
No 274
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.72 E-value=5.1 Score=38.53 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=54.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|+|..|..+|..|.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887753 23 468888874 1 1122222111 11123578888874
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
+|++|=+.. + ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888874333 3 34567776653 344676665544
No 275
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=65.72 E-value=13 Score=36.01 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=55.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhcc
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 434 (615)
||+|.|| |-.|..+++.|++ .| -+++++|+.- ......+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 7777777776653 25 3678887621 111111111 111111 212223577778766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 435 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 435 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0235667776655567887544
No 276
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=65.52 E-value=5.7 Score=40.41 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=27.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
-+..+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345789999999999999988865 364 577888754
No 277
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=65.39 E-value=5.5 Score=39.78 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988865 363 577888765
No 278
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=65.33 E-value=5.5 Score=39.80 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998875 353 699999874
No 279
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=65.22 E-value=7.2 Score=39.53 Aligned_cols=34 Identities=32% Similarity=0.503 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 3589999999999999988754 363 688999874
No 280
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=65.20 E-value=7.4 Score=37.59 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=57.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 433 (615)
.+|+|.|| |-.|..+++.|++.- .| .+++++|+.. ... .+.+ ...+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNT-DVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSC-HHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----ccc-cccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888876520 12 3688887641 110 1111 111111 22222457788887
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHccCCCcEEEec
Q 007156 434 IKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSL 469 (615)
Q Consensus 434 vkPtvLIG~S~~~g~---------------Fteevv~~Ma~~~erPIIFaL 469 (615)
.++|++|=+.+.... -+..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 789999988775321 133567777665556788743
No 281
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=65.15 E-value=5.8 Score=38.68 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|+|+|||.+|+.+|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998865 364 588888763
No 282
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=65.09 E-value=5.5 Score=39.71 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+..|+|+|||.+|+.+|..|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 3589999999999999999875 35 36999998643
No 283
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=65.06 E-value=5.8 Score=39.47 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..|.. .| .++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5689999999999999988754 25 3688999864
No 284
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=64.80 E-value=11 Score=36.51 Aligned_cols=87 Identities=14% Similarity=0.207 Sum_probs=55.0
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
..||+|.|| |-.|..+++.|++ .| .+++++++. ... ++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g-------~~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RG-------DVELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CT-------TEEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 7788777777753 24 246666653 011 121 11357778876
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+++|++|=+.+..+. .+..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 1345677776665567888654
No 285
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=64.76 E-value=5.6 Score=38.89 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999988865 25 368999987
No 286
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=64.68 E-value=6.5 Score=34.06 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=26.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999998865 25 368888874
No 287
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=64.63 E-value=4 Score=39.62 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
||.|+|+|..|..+|..|.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 42 47788864
No 288
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=64.58 E-value=11 Score=36.14 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=57.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhcc
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 434 (615)
||+|.|| |-.|..+++.|.+. .| .+++.++++.- +...+......+.. +..+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6999996 88888888885431 13 46777776421 11112111111111 22222467788875
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHccCCCcEEEecC
Q 007156 435 KPTILIGTSGQGRT------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 435 kPtvLIG~S~~~g~------Fteevv~~Ma~~~erPIIFaLS 470 (615)
.|++|=+++.... .++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765421 2467888888777677888533
No 289
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=64.49 E-value=5.9 Score=40.41 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 5 3678888743
No 290
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=64.44 E-value=6.4 Score=40.27 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 364 2377787653
No 291
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=64.43 E-value=6.4 Score=40.68 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=29.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 354 2469999886543
No 292
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=64.40 E-value=5.8 Score=39.57 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=28.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 579999999999999998865 25 369999987543
No 293
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.01 E-value=6 Score=37.89 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~l-vD~~ 399 (615)
..+|||+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988753 53 4566 8873
No 294
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=63.98 E-value=6.1 Score=40.78 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=28.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
....+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 345567899999999999999988764 3 147999998
No 295
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=63.90 E-value=6.1 Score=38.16 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988864 253 279999985
No 296
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=63.47 E-value=5.6 Score=40.26 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999998865 364 588888754
No 297
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=67.29 E-value=1.5 Score=41.81 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=53.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHh
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 432 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 432 (615)
+.+.||.|+|+|..|..+|..|... | .+++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 4 25777776421 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007156 433 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 473 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 473 (615)
. +|++| ++.... .++++++ ++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 77666 333332 3455552 33223456888888876
No 298
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=63.34 E-value=3.6 Score=45.39 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=33.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 356789999999999999999999864 75 799999986
No 299
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=63.28 E-value=25 Score=31.90 Aligned_cols=91 Identities=10% Similarity=0.160 Sum_probs=53.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc--chhhcc-ccCCCCCHHHHHh
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF--KKPWAH-EHEPVKELVDAVN 432 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~--k~~fA~-~~~~~~~L~e~V~ 432 (615)
||+|.|| |-.|..+++.|++ .| .++++++++. +.+... ...+.. +..+.. . ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~-~-~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLT-L-SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCC-H-HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChh-h-hhhc
Confidence 7999996 8888888887764 25 4788888741 111111 011111 111111 1 6676
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHccCCCcEEEecC
Q 007156 433 AIKPTILIGTSGQGRT-------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~-------Fteevv~~Ma~~~erPIIFaLS 470 (615)
. +|++|=+.+.... .++.++++|.+...+-+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988776422 1367888887665566776544
No 300
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=63.27 E-value=6.9 Score=39.24 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.+|+.+|-.|.+. .| ..++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G------~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HG------ITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC------CCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cC------CCcEEEEeCCC
Confidence 46899999999999999998761 14 14799999875
No 301
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=63.25 E-value=6.2 Score=38.44 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SG-------FSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 4689999999999999988865 25 368999984
No 302
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.13 E-value=11 Score=37.03 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=59.0
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc------chhhcc-ccCCCCC
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF------KKPWAH-EHEPVKE 426 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~------k~~fA~-~~~~~~~ 426 (615)
..+|+|.|| |-.|..+++.|++ .| -+++++|+..- .....+... ...+.. +..+..+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLVN---SKREAIARIEKITGKTPAFHETDVSDERA 69 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCSS---SCTHHHHHHHHHHSCCCEEECCCTTCHHH
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCCc---chHHHHHHHHhhcCCCceEEEeecCCHHH
Confidence 468999996 6677777777654 35 36888887421 100001111 001111 1122245
Q ss_pred HHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 427 LVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 427 L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 70 LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 7788887789999988775421 1346788888776678888544
No 303
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=62.86 E-value=6.8 Score=41.06 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999988764 25 479999986
No 304
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=62.84 E-value=6.2 Score=41.42 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
||||+|||.||+..|..|.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 42 23689998754
No 305
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=62.58 E-value=7.5 Score=39.18 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988653 64 578888764
No 306
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=62.31 E-value=8.6 Score=39.74 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=30.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
..+|||+|||.||+..|..|.+. |. ..+|.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999998763 53 1369999987644
No 307
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=62.17 E-value=11 Score=36.05 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=22.9
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.++||.||+ -.|..+|+.|+ + .| -+++++|++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~----~-~G-------~~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLA----R-AG-------ANIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHH----H-TT-------CEEEEECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 3667899999984 34444555444 3 35 368888874
No 308
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=61.99 E-value=14 Score=34.21 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=56.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHH
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDA 430 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~ 430 (615)
....+|+|.|| |-.|..+++.|++ .| ...++++++++. ++.+.+.. ...+. -+..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~-----~g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GS-----DKFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TT-----TTCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cC-----CCcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 7777777777754 22 014788887741 11011100 11111 122222457777
Q ss_pred HhccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHccCCCcEEEecC
Q 007156 431 VNAIKPTILIGTSGQGRT----------------F-------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~----------------F-------------teevv~~Ma~~~erPIIFaLS 470 (615)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 775 8999977764321 1 356777777665566777533
No 309
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=61.97 E-value=6.2 Score=39.18 Aligned_cols=35 Identities=11% Similarity=0.253 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G-------~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AG-------LNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCCCC
Confidence 479999999999999998875 25 368999987543
No 310
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=61.89 E-value=7.8 Score=41.28 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=28.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999998753 53 58899885
No 311
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=61.88 E-value=8.2 Score=38.51 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999998854 35 4799999864
No 312
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=61.86 E-value=6.4 Score=37.52 Aligned_cols=77 Identities=27% Similarity=0.343 Sum_probs=44.2
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-------cccC
Q 007156 351 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHE 422 (615)
Q Consensus 351 ~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-------~~~~ 422 (615)
.++++.++||.||+. .|..+|+.|++ .| -+++++|++- +.+.+.++.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 34455555543 35 3688888741 11222222211 1222
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 423 PVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 423 ~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223456666655 799999877654
No 313
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=61.86 E-value=7.1 Score=40.03 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
+..|||+|||.+|+.+|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 363 379999987553
No 314
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=61.78 E-value=22 Score=38.77 Aligned_cols=92 Identities=16% Similarity=0.109 Sum_probs=61.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
|..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.- .+ . ..+ .+ .-...++.|
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~a~-~~---g~~~~~l~e 192 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAA-----FGA-------YVVAYDPYV----SP-A---RAA-QL---GIELLSLDD 192 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CH-H---HHH-HH---TCEECCHHH
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEECCCC----Ch-h---HHH-hc---CcEEcCHHH
Confidence 567899999999999999999998854 253 688888742 11 0 000 00 011127889
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecC
Q 007156 430 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 430 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLS 470 (615)
+++. .|+++=.- ...++++++.+..|. +..+|.=.|
T Consensus 193 ~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~~k---~g~ilin~a 232 (529)
T 1ygy_A 193 LLAR--ADFISVHLPKTPETAGLIDKEALAKTK---PGVIIVNAA 232 (529)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECS
T ss_pred HHhc--CCEEEECCCCchHHHHHhCHHHHhCCC---CCCEEEECC
Confidence 9986 89887543 234577777776663 566887777
No 315
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.73 E-value=12 Score=34.92 Aligned_cols=68 Identities=13% Similarity=0.203 Sum_probs=39.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc-
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 434 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v- 434 (615)
++||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+..+..++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5566666666653 35 3688888741 1 1211 1111111113466666655
Q ss_pred -CCcEEEEccCCC
Q 007156 435 -KPTILIGTSGQG 446 (615)
Q Consensus 435 -kPtvLIG~S~~~ 446 (615)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 316
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=61.63 E-value=11 Score=36.48 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=42.9
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-------cccC
Q 007156 351 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHE 422 (615)
Q Consensus 351 ~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-------~~~~ 422 (615)
.+|+++++||.||++ .|.++|+.|+ + .| -+++++|++- +.+......+. -|..
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLA----R-AG-------ARVVLADLPE-------TDLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEECTT-------SCHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHH----H-CC-------CEEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCC
Confidence 467889999999853 3444444444 3 36 3688888751 12222222111 1222
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 423 PVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 423 ~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
+..++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 223455566554 799999877654
No 317
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=61.61 E-value=10 Score=40.90 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=31.0
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhc
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 485 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~ 485 (615)
-+++|=.|+.+--.|+++.+... ++-++| ||.+.-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35677778877567788777664 445655 899888888876554
No 318
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=61.61 E-value=6.6 Score=40.91 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|||.||+..|..|.+ .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999998864 3531 378899886
No 319
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=61.34 E-value=5.4 Score=38.69 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=58.5
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCc--cCccccchhhcc-ccCCCCCHHHH
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL--ESLQHFKKPWAH-EHEPVKELVDA 430 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~--~~L~~~k~~fA~-~~~~~~~L~e~ 430 (615)
..+|+|.|| |--|..+++.|++. | ..+++.++++. ++. ..+......+.+ +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888888653 3 13688877742 110 001111111111 22222467788
Q ss_pred HhccCCcEEEEccCCCCC--------CCHHHHHHHHccCCCcEEEecCC
Q 007156 431 VNAIKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLSN 471 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLSN 471 (615)
++. +|++|-+++.... .+..++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2456788887666667888 664
No 320
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=61.33 E-value=7.4 Score=40.83 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
..+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999886530 12 47889988654
No 321
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=61.29 E-value=22 Score=33.89 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=42.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
..++++.++||.||+. ||...++..+.+ .| -+++++|++- ++ +.... .+.-|..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHHH
Confidence 3467888999999743 344444444444 35 3688888741 11 21111 12112222234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 007156 430 AVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 430 ~V~~v-----kPtvLIG~S~~~ 446 (615)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999877754
No 322
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=60.65 E-value=11 Score=36.07 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=23.2
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.++||.||+ -.|..+|+.|+ + .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~----~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAV----A-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 4678899999984 33444555443 3 35 368888874
No 323
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=60.55 E-value=7.1 Score=39.38 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998875 363 68999987554
No 324
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=60.36 E-value=7.4 Score=41.19 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=28.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|..|.+.. ..|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcC
Confidence 48999999999999999987632 13542 0138889876
No 325
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=60.34 E-value=23 Score=34.57 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=54.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 433 (615)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+......+.. +..+..++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8888888887765 24 4688888742 111112211111111 21222357777774
Q ss_pred cCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 470 (615)
+|++|=+.+..+.. +..+++++.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777666567888544
No 326
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=60.13 E-value=7.8 Score=46.08 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=33.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999876 75 799999986
No 327
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=60.09 E-value=8.3 Score=40.10 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=27.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|||+|||.||+..|..|.+.+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999976431 12 4688888754
No 328
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=60.06 E-value=14 Score=37.34 Aligned_cols=103 Identities=13% Similarity=0.164 Sum_probs=57.5
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcc-ccchhhcc-ccCCCCCHH
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 428 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 428 (615)
+++..+|+|.|| |-.|..+++.|++ .| ..+++.+|+..- .....+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LG------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TT------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cC------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 456679999997 8888888877764 24 147888887421 1001121 00111111 111112355
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcc-CCCcEEEecC
Q 007156 429 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASL-NEKPIIFSLS 470 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~-~erPIIFaLS 470 (615)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5555 69999988875421 144567777655 4567887544
No 329
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=60.04 E-value=8.4 Score=36.69 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=54.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhcc
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 434 (615)
||+|.|| |-.|..+++.|++. ..| -+++.+|++. ++...+......+.. +..+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5899998 87887777777531 002 3688887741 111111111111111 11222457777775
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHccCCCcEEEecC
Q 007156 435 KPTILIGTSGQGR----TFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 435 kPtvLIG~S~~~g----~Fteevv~~Ma~~~erPIIFaLS 470 (615)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876420 23678899988766667887543
No 330
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=60.03 E-value=12 Score=35.81 Aligned_cols=88 Identities=20% Similarity=0.264 Sum_probs=54.6
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHH
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 430 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 430 (615)
+-...||+|.|| |-.|..+++.|++ .| -+++.+|++ .. ++. +..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-Dl~-----------d~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DL-DIT-----------NVLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TC-CTT-----------CHHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cC-CCC-----------CHHHHHHH
Confidence 345678999987 7777777777653 24 368888874 11 122 11347777
Q ss_pred HhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 431 VNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 876689999988875431 03456777766544 7887544
No 331
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=60.01 E-value=10 Score=40.71 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999998753 5 368888875
No 332
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=59.93 E-value=8 Score=42.19 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 353 599999874
No 333
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.63 E-value=21 Score=33.45 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=24.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+++.++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 333344444443 35 368888875
No 334
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=59.62 E-value=17 Score=39.17 Aligned_cols=107 Identities=23% Similarity=0.269 Sum_probs=59.0
Q ss_pred CceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GAGsAG~-GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
-+||.|+|.|-+|+ |+|++|.+ .| .++...|.+ .....+.|...-.++--.+ +- +-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~---~~~~~~~l~~~gi~~~~g~----~~-~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLA---PNSVTQHLTALGAQIYFHH----RP-ENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSS---CCHHHHHHHHTTCEEESSC----CG-GGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECC---CCHHHHHHHHCCCEEECCC----CH-HHcC-
Confidence 37999999999999 58988865 36 478888874 1100011221111111001 11 1233
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCcCCCCHHHHhcccCC-cEEEeeCC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG-RAIFASGS 497 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEctpedA~~wT~G-raifASGS 497 (615)
.+|.+|=.++.+ .=++++.++.. ..-|||= . +|-++.+.++ +.|--|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~--~gi~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAARE--ARIPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHH--TTCCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHH--CCCCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 388888555554 35778777664 2446652 2 2333444444 46777897
No 335
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=59.56 E-value=8.5 Score=39.03 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999988752 5 4688888763
No 336
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.56 E-value=9 Score=40.00 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999888653 5 378999987
No 337
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=59.50 E-value=8.8 Score=39.22 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999998865 25 46888887643
No 338
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=59.49 E-value=6.5 Score=38.37 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=26.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 4689999999999999998865 253 5888987
No 339
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=59.25 E-value=4.1 Score=43.93 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=25.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.||||+|+|.||+..|+.|.. .+ -+|.|||++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999998877632 12 379999985
No 340
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=59.14 E-value=7.5 Score=37.25 Aligned_cols=83 Identities=22% Similarity=0.395 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
||+|.|| |-.|..+++.|++ .| -+++.+|+. .. ++. +...+.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DIT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCC-----------CHHHHHHHHHhcC
Confidence 8999996 8888877777753 24 478888871 11 122 1135778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 436 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 436 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988775531 034577777765554 887544
No 341
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=59.08 E-value=7.8 Score=38.12 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=30.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 58899999999999999999888763 4 468888874
No 342
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=58.86 E-value=18 Score=33.61 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=53.8
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHH
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDA 430 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~ 430 (615)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+. -+..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 34578999996 67777777777653 42 12788888752 11111110011111 111122345566
Q ss_pred HhccCCcEEEEccCCCCC-------------CCHHHHHHHHccCCCcEEEecC
Q 007156 431 VNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 58999988775310 1345566665544445665433
No 343
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=58.84 E-value=5 Score=38.86 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 34689999999999999988864 253 57788854
No 344
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=58.66 E-value=7.9 Score=40.79 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 479999986
No 345
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=58.65 E-value=7.8 Score=40.79 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RG-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEeCCCC
Confidence 4589999999999999988765 35 36899998654
No 346
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=58.62 E-value=9.1 Score=37.81 Aligned_cols=101 Identities=12% Similarity=0.174 Sum_probs=60.3
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch----------hhcc-c
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 420 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~----------~fA~-~ 420 (615)
+...+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45679999996 8888888887765 25 46888887421 11111111110 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 421 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 421 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122235777777 59999988875421 1334788888777678998633
No 347
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=58.62 E-value=8.1 Score=40.82 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4679999999999999988865 35 4689999754
No 348
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.59 E-value=17 Score=35.88 Aligned_cols=81 Identities=7% Similarity=0.131 Sum_probs=45.8
Q ss_pred CCCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchh------hccc
Q 007156 350 GGSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAHE 420 (615)
Q Consensus 350 g~~L~d~riv~~GAGs---AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~------fA~~ 420 (615)
..+|++.++||.||++ .|.+||+.|++ .| -+++++|++. ...+.+...... +.-|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999963 45557777654 36 3688888752 111111111111 1112
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 421 HEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 421 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 22223455666655 799999877654
No 349
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.52 E-value=15 Score=36.38 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=58.2
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccch----------hhcc-c
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 420 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~----------~fA~-~ 420 (615)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45578999998 8888888877764 25 3688888742 111111221111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 421 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 421 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
..+..++.++++ ++|++|=+.+..+. -+..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235677777 59999998876431 1345667776655566887543
No 350
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=58.50 E-value=24 Score=35.20 Aligned_cols=108 Identities=21% Similarity=0.241 Sum_probs=57.1
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc---cCCccCcccc------chhhcc-
Q 007156 351 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV---SSRLESLQHF------KKPWAH- 419 (615)
Q Consensus 351 ~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~---~~R~~~L~~~------k~~fA~- 419 (615)
..++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..--. ..+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 4577889999976 77777777777641 014 4788888742100 0000001111 111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecC
Q 007156 420 EHEPVKELVDAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 420 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999987774431 124567777666555 888655
No 351
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=58.41 E-value=5.9 Score=40.52 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=52.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHh
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 432 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 432 (615)
....||.|+|+|..|...++.+.. +..| .+-+.++|++ .++ .....+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~------~~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSG------VEVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTT------EEEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCC------cEEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHhc
Confidence 345699999999988766655542 1112 1234467763 111 22222233100122468999999
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 433 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
.-++|+++ ++++. .+..++++...+. .++|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 87899988 55544 4555655554432 355554
No 352
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=58.04 E-value=12 Score=41.43 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=30.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
.++.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 557899999999999999988865 353 7999999843
No 353
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=58.01 E-value=9.4 Score=36.19 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+-+|+|+|||.||+..|..|.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999988865 25 468888875
No 354
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=57.90 E-value=8.9 Score=39.70 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|||+|||.||+..|..|.+. . .| -+|.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 0 12 4788888864
No 355
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=57.75 E-value=8.5 Score=37.45 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=25.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
--|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 358999999999999877754 35 368889864
No 356
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=57.46 E-value=38 Score=34.11 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=56.9
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHH
Q 007156 354 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 431 (615)
Q Consensus 354 ~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V 431 (615)
...+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8788888877764 24 3688888752 111111111111111 222223577777
Q ss_pred hccCCcEEEEccCCCCC--C---------------CHHHHHHHHccCCCcEEEecC
Q 007156 432 NAIKPTILIGTSGQGRT--F---------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 432 ~~vkPtvLIG~S~~~g~--F---------------teevv~~Ma~~~erPIIFaLS 470 (615)
+ ++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988775432 1 235666766655567887543
No 357
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=57.29 E-value=12 Score=39.33 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
||.|+|+|..|..+|..|.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 368888874
No 358
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=57.25 E-value=11 Score=36.08 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=40.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh------c-cccCCC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------A-HEHEPV 424 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f------A-~~~~~~ 424 (615)
+|++.++||.||+. ||...++..+.+ .| -+++++|++- +.+.+..+.+ . -|..+.
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~ 64 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDINE-------AAGQQLAAELGERSMFVRHDVSSE 64 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEEECCCTTCH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCceEEEEccCCCH
Confidence 57788999999743 344444444443 35 3688888741 1122211111 1 111222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007156 425 KELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 425 ~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.++.++++.+ ++|+||=..+..
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 65 ADWTLVMAAVQRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455555554 689999777653
No 359
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=57.23 E-value=8.5 Score=41.29 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 457899999999999999988652 5 4699999865
No 360
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=57.00 E-value=21 Score=33.58 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=55.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHH
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 430 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 430 (615)
..-.+|+|.|| |-.|..+++.|++ .| .-++++++++. ++...+......+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G------~~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQ------TIKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CT------TEEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CC------CceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7777777777653 24 13677777742 110111111111111 22223457778
Q ss_pred HhccCCcEEEEccCCCCC--CCHHHHHHHHccCCCcEEEecC
Q 007156 431 VNAIKPTILIGTSGQGRT--FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 431 V~~vkPtvLIG~S~~~g~--Fteevv~~Ma~~~erPIIFaLS 470 (615)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554322 2566788887655555666444
No 361
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=56.96 E-value=8.7 Score=39.80 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
..+|||+|||.||+..|..|.+.-... + .-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 347999999999999999997642110 0 047889988753
No 362
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=56.87 E-value=7.8 Score=40.95 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998865 25 4799999863
No 363
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=56.49 E-value=8.8 Score=39.99 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|||+|||.||+..|..|.+. +- ..+|.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988653 11 14788888765
No 364
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=56.39 E-value=8.4 Score=42.03 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999999865 353 799999864
No 365
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=56.37 E-value=49 Score=35.55 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..||.|+|+|.-|+.+|..|.+. | -+++++|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999998763 5 468888875
No 366
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=56.36 E-value=9.2 Score=40.06 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999987764 25 3799999873
No 367
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=56.29 E-value=26 Score=33.39 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=39.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh------c-cccCCC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------A-HEHEPV 424 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f------A-~~~~~~ 424 (615)
++++.++||.||+. ||..-++..+.+ .| -+++++|++- . .+.+..+.+ . -|..+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----P---AGEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---HHHHHHHHhCCceEEEEccCCCH
Confidence 57788999999853 333344444443 36 3688888742 1 121111111 1 122222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007156 425 KELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 425 ~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566554 799999776643
No 368
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=56.20 E-value=18 Score=34.53 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=44.6
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh--------cc
Q 007156 351 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW--------AH 419 (615)
Q Consensus 351 ~~L~d~riv~~GAGs---AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f--------A~ 419 (615)
.++++.++||.||+. .|.++|+.|++ .| -+++++|+..- ..+.+.+....+ .-
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AG-------ARLIFTYAGER----LEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSGG----GHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEecCchH----HHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 45556666654 36 36888887521 101111111111 11
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 420 EHEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 420 ~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
|..+..++.++++.+ +.|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222223466666655 789999877654
No 369
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=56.17 E-value=13 Score=40.39 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=21.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++++.+++|.|||.+|.++|..+.+. |. +++++|+.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999996666666666542 52 58888774
No 370
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=56.17 E-value=12 Score=39.51 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988653 5 368888874
No 371
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=56.15 E-value=11 Score=39.18 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=29.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
..+|||+|||.||+..|..|.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 354 237999998643
No 372
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=56.12 E-value=11 Score=39.94 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999999764 20 125799999864
No 373
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=55.92 E-value=10 Score=41.04 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
..+|||+|||.||...|-.|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876320 24 47899998643
No 374
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=55.78 E-value=11 Score=39.21 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHH
Q 007156 355 DQRFLFLGAGEAGTGIAELIALE 377 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~ 377 (615)
+-.|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988753
No 375
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=55.75 E-value=12 Score=39.85 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=28.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
.||||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2479999987543
No 376
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=55.68 E-value=12 Score=41.76 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|||+|||.||+..|..|.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999998763 5 3699999863
No 377
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=55.56 E-value=12 Score=40.45 Aligned_cols=39 Identities=15% Similarity=0.309 Sum_probs=30.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
...+|||+|||.||+..|..|.+.- .| .+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 3579999999999999999886530 12 479999987543
No 378
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=55.49 E-value=9.8 Score=40.78 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999998875310 24 3788999854
No 379
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=55.33 E-value=9.5 Score=39.80 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
-+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987764 25 3789999873
No 380
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=55.29 E-value=9.1 Score=36.92 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|..+.+ .|+ ++.++|.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 353 57777653
No 381
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=55.25 E-value=17 Score=36.59 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++..+.|++..+. ..++|+|+|||..|..++.++.. .|. ++++.+|+.
T Consensus 154 ~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 154 LGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 3344555643333 88999999999888777665543 353 478888763
No 382
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=55.09 E-value=10 Score=40.34 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+-.|+|+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588999864
No 383
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=55.01 E-value=19 Score=36.28 Aligned_cols=86 Identities=19% Similarity=0.083 Sum_probs=54.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
+.||.++|+ |..|--+++.+.+. |. +-++.||.+.. +. + . + ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-~------~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-H------L--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-E------T--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-e------C--CeeccCCHHHHhhc
Confidence 468999999 99887777765442 53 35778887411 00 1 0 0 01113579998885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEE
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPII 466 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 466 (615)
.++|+.|= ..++ .+..++++...+..-+.+|
T Consensus 63 ~~~D~viI-~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVI-YVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEE-CCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEE-ecCH-HHHHHHHHHHHHCCCCEEE
Confidence 56998884 3433 5788999988876665533
No 384
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=54.95 E-value=12 Score=39.20 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=28.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
.+|||+|||.||+..|..|.+.. .| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999987630 12 47999998653
No 385
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=54.92 E-value=9.7 Score=39.97 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LG-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3579999999999999988865 25 3799999874
No 386
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=54.85 E-value=49 Score=31.51 Aligned_cols=76 Identities=16% Similarity=0.230 Sum_probs=42.3
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHH
Q 007156 351 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 429 (615)
Q Consensus 351 ~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 429 (615)
.++++.++||.||+. .|..+|+.|+ + .| -+++++|++- ...+.+. ...+.-|. ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~----~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLS----Q-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHH----H-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHH----H-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 468889999999853 3444444443 3 35 3688888753 0001111 00111111 235666
Q ss_pred HHhcc-CCcEEEEccCCC
Q 007156 430 AVNAI-KPTILIGTSGQG 446 (615)
Q Consensus 430 ~V~~v-kPtvLIG~S~~~ 446 (615)
+++.+ +.|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 67666 799999877653
No 387
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.72 E-value=15 Score=38.00 Aligned_cols=91 Identities=8% Similarity=0.111 Sum_probs=53.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc-
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 434 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v- 434 (615)
.||.|+|+|..|..+|..|... | .+++++|++- +.+...+.. ......++.|+++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~~---G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVDE---GFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHHT---TCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHHc---CCeeeCCHHHHHHhcc
Confidence 5899999999999999988753 5 3688888741 112111100 011124677777642
Q ss_pred -CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007156 435 -KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 435 -kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 470 (615)
.+|++| ++.+.. -++++++.++.+.+.-||.=++
T Consensus 67 ~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 467766 444432 4667777776554444554443
No 388
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.72 E-value=9.3 Score=39.89 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999988764 25 379999986
No 389
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=54.66 E-value=7.6 Score=41.03 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
.+|||+|||.||+..|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999876431 24 36888887643
No 390
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=54.40 E-value=12 Score=36.77 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=57.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccC---CccCccccch------hhcc-ccCCC
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---RLESLQHFKK------PWAH-EHEPV 424 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~---R~~~L~~~k~------~fA~-~~~~~ 424 (615)
.+|+|.|| |-.|..+++.|++ .| -+++++|+.---..+ ..+.+...+. .+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 58999986 8788888877764 25 368888764110000 0000111100 1111 11222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 425 KELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 425 ~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
.++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777876679999988775421 1345677777666567888543
No 391
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.36 E-value=9.8 Score=40.50 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999998865 24 4799999863
No 392
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=54.36 E-value=8.2 Score=41.19 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 346899999999999999988653 21 258999998743
No 393
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=54.27 E-value=13 Score=35.69 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=43.2
Q ss_pred CCCceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchh------hccccCC
Q 007156 353 LADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAHEHEP 423 (615)
Q Consensus 353 L~d~riv~~GAG---sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~------fA~~~~~ 423 (615)
+++.++||.||+ -.|..+|+.|++ .| -+++++|++. . ..+.+.+.... +.-|..+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G-------~~V~~~~r~~---~-~~~~~~~l~~~~~~~~~~~~D~~~ 70 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EG-------AELAFTYQND---K-LKGRVEEFAAQLGSDIVLQCDVAE 70 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESST---T-THHHHHHHHHHTTCCCEEECCTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CC-------CEEEEEcCcH---H-HHHHHHHHHHhcCCcEEEEccCCC
Confidence 677899999984 556666666654 35 3688888763 1 11111111111 1112122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 424 VKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 424 ~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..++.++++.+ ++|+||=..+..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 71 DASIDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455555544 689999887754
No 394
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=54.01 E-value=10 Score=38.57 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|||+|||.||+..|..|.+ .|. .-+|.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 4689999999999999988854 353 2368888765
No 395
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=54.00 E-value=11 Score=40.52 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45689999999999999998875 353 688999864
No 396
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=53.80 E-value=11 Score=37.59 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=50.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|+|..|...++.|... .+. +-+.++|++ . +......+.|- .. ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN----ADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhhC----CCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 5899999999887766655431 121 223366763 1 11222222221 12 578999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
+|+++ ++++. ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 3455555554432 355553
No 397
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=53.70 E-value=26 Score=32.20 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=51.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCC-CCCHHHHHhc
Q 007156 357 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEP-VKELVDAVNA 433 (615)
Q Consensus 357 riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~-~~~L~e~V~~ 433 (615)
||+|.| +|-.|..+++.|++ .| -++++++++.- +...+ .+..+.. +..+ ..++.++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLH- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTT-
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHc-
Confidence 789999 46666666666643 34 47888887521 11111 0111111 2222 234666666
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLS 470 (615)
++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 63 -~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 63 -GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp -TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred -CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 49999988775420 1456777776655455666433
No 398
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=53.70 E-value=11 Score=40.50 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=26.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 46677764
No 399
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=53.69 E-value=14 Score=34.76 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=24.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999743 444445555544 35 368888874
No 400
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=53.66 E-value=26 Score=35.66 Aligned_cols=45 Identities=18% Similarity=0.184 Sum_probs=29.1
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 343 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 343 l~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
+.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3444333344467899999999887766555432 263 57888885
No 401
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=53.65 E-value=9.3 Score=36.81 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999999876654 353 57788874
No 402
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=53.62 E-value=8.2 Score=38.26 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 7999999999999999886410 024 378889876
No 403
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=53.52 E-value=9 Score=40.13 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4589999999999999988864 24 479999986
No 404
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=53.51 E-value=11 Score=39.79 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 5689999999999999998854 24 4799999864
No 405
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=53.45 E-value=12 Score=37.16 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=28.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.|..|+|+|||.||+..|..|.+. +.|+ ++.++|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 467799999999999999888653 2353 68888875
No 406
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=53.37 E-value=32 Score=34.52 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 341 GLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 341 gll~Alr~~g~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
..+.+++..+ .-.+++++|.|| |..|..++.++.. .| -+++.+|+
T Consensus 157 ta~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 157 TVYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 3455665442 335689999999 7888777766643 35 26888875
No 407
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=53.29 E-value=12 Score=39.41 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+..|+|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988864 35 47999996553
No 408
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.25 E-value=12 Score=39.40 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877653 4 479999984
No 409
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=53.23 E-value=12 Score=37.83 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=24.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|+|+|||.||+..|-.|.+. ..| .++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECC
Confidence 699999999999999888653 014 357777765
No 410
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=53.22 E-value=19 Score=34.34 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=41.5
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-------ccccC
Q 007156 351 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AHEHE 422 (615)
Q Consensus 351 ~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f-------A~~~~ 422 (615)
.+|+++++||.||++ .|.++|+.++ + .| -+++++|++- +.+......+ .-|..
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~ 62 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLA----A-DG-------ATVIVSDINA-------EGAKAAAASIGKKARAIAADIS 62 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEECCCCTT
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHH----H-CC-------CEEEEEeCCH-------HHHHHHHHHhCCceEEEEcCCC
Confidence 357889999999853 3444555444 3 36 3688887741 1122221111 11111
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 423 PVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 423 ~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
+..++.++++.+ +.|+||=..+..
T Consensus 63 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 63 DPGSVKALFAEIQALTGGIDILVNNASIV 91 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 223455555544 799999766643
No 411
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=53.21 E-value=9.7 Score=39.63 Aligned_cols=32 Identities=19% Similarity=0.397 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 579999999999999988865 364 68888875
No 412
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=53.21 E-value=13 Score=38.95 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+-.|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 45799999999999999888653 5 478999986
No 413
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.08 E-value=32 Score=33.60 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=44.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----------c
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 420 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 420 (615)
.+|++.++||.||++ ||...++..+.+ .| -+++++|++ . +.+......+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 368889999999854 333444444444 36 368888874 1 123332222211 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 421 HEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 421 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..+..++.++++.+ +.|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11223455666655 799999777654
No 414
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=53.03 E-value=11 Score=40.42 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=26.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 456789999999999999988865 364 46666654
No 415
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=52.84 E-value=8.6 Score=37.90 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=26.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 253 57788854
No 416
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=52.80 E-value=42 Score=32.33 Aligned_cols=75 Identities=11% Similarity=0.048 Sum_probs=41.0
Q ss_pred CCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHHHH
Q 007156 353 LADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDA 430 (615)
Q Consensus 353 L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~ 430 (615)
++++++||.||+. .|.++|+.|+ + .| -+++++|++- .. +...+..+. -|..+..++.++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~----~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~ 86 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYR----D-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRI 86 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHH----H-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHH----H-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHH
Confidence 5677899999753 3444555444 3 36 3788888751 11 111111111 122222345556
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 007156 431 VNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 431 V~~v-----kPtvLIG~S~~~ 446 (615)
++.+ ++|+||=..+..
T Consensus 87 ~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 87 VREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEECCCCC
Confidence 6654 799999877653
No 417
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=52.79 E-value=14 Score=39.48 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 397 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD 397 (615)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 15 4799999
No 418
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=52.78 E-value=13 Score=38.25 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 57999999999999999886520 04 3689999863
No 419
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=52.67 E-value=15 Score=37.04 Aligned_cols=102 Identities=19% Similarity=0.206 Sum_probs=60.6
Q ss_pred CCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-------c-cc
Q 007156 350 GGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------A-HE 420 (615)
Q Consensus 350 g~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f-------A-~~ 420 (615)
...+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- .+...+..+ . -+
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~D 78 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGD 78 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECC
Confidence 34577899999996 88888888887652 142 47888887411 111111111 1 11
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----C------------CHHHHHHHHccCCCcEEEecC
Q 007156 421 HEPVKELVDAVNAIKPTILIGTSGQGRT----F------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 421 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----F------------teevv~~Ma~~~erPIIFaLS 470 (615)
..+..++.++++ ++|++|=+.+.... . +..+++++.+..-+-|||.=|
T Consensus 79 l~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 79 VRDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 122235667776 59999998876531 0 234666666665567787554
No 420
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=52.51 E-value=13 Score=39.91 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=29.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
...+|+|+|||.||+..|..|.. .| .++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G-------~~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LG-------ARVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CC-------CeEEEEEecccc
Confidence 35789999999999999988865 36 378899886443
No 421
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=52.49 E-value=12 Score=39.46 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+..|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988865 35 478999984
No 422
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=52.07 E-value=17 Score=38.44 Aligned_cols=109 Identities=12% Similarity=0.054 Sum_probs=62.5
Q ss_pred CceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc--cCCc---cccCCccCccccchhhccccCCCCCHH
Q 007156 355 DQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD--SKGL---IVSSRLESLQHFKKPWAHEHEPVKELV 428 (615)
Q Consensus 355 d~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD--~~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~ 428 (615)
-.||.|+| ||..|..+|-.|+.. ++-- | ...+.|+| .+.. +.-... +|++...+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~-e-~~~l~L~d~d~~~~~~~~~G~am-DL~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFG-Q-DQPIALKLLGSERSFQALEGVAM-ELEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTC-T-TCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCC-C-CceeEEEecCccchhhhhHHHHH-hHHhhhhhhcCCcEEecCCH
Confidence 36999999 799999998877652 4411 1 12255544 3210 000001 24444334443322224577
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcc-CCCcEEEecCCCC
Q 007156 429 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASL-NEKPIIFSLSNPT 473 (615)
Q Consensus 429 e~V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~-~erPIIFaLSNPt 473 (615)
++++. .|++|=+.+.+ |- .=+++++.+.++ +..-+|+-.|||.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 88887 88877554433 31 113455566676 7889999999997
No 423
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=52.05 E-value=17 Score=35.83 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=44.1
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc------ccc
Q 007156 351 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HEH 421 (615)
Q Consensus 351 ~~L~d~riv~~GAGs---AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA------~~~ 421 (615)
..|+++++||.||++ .|.++|+.|++ .| -+++++|++-- ..+.+.+....+. -|.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G-------~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dv 90 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AG-------AELAFTYQGDA----LKKRVEPLAEELGAFVAGHCDV 90 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TT-------CEEEEEECSHH----HHHHHHHHHHHHTCEEEEECCT
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEEcCCHH----HHHHHHHHHHhcCCceEEECCC
Confidence 468889999999964 55566666654 36 35888887510 0011111111111 122
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 422 EPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 422 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.+..++.++++.+ +.|+||=..+..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 2223455555544 799999777654
No 424
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=51.85 E-value=14 Score=36.64 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=27.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 689999999999999888653 3100 0014799999873
No 425
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.78 E-value=12 Score=39.12 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 3579999999999999987754 35 378999986
No 426
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=51.77 E-value=12 Score=38.87 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=27.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987631 13 5799999875
No 427
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=51.67 E-value=11 Score=37.40 Aligned_cols=90 Identities=6% Similarity=0.098 Sum_probs=49.7
Q ss_pred CCceEEEeCcChHHHH-HHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHh
Q 007156 354 ADQRFLFLGAGEAGTG-IAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 432 (615)
Q Consensus 354 ~d~riv~~GAGsAG~G-IA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 432 (615)
+..||.|+|+|..|.. .++.|.. ..|. +-+.++|++ . +......+.|- .....++.|+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~~--~~~~~~~~~ll~ 65 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN----K---VKREKICSDYR--IMPFDSIESLAK 65 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC----H---HHHHHHHHHHT--CCBCSCHHHHHT
T ss_pred ccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC----H---HHHHHHHHHcC--CCCcCCHHHHHh
Confidence 3479999999998865 5555432 1121 223367763 1 11222222221 122578999998
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 433 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 433 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
++|+++ ++++.. ...++++...+ ..++|+.
T Consensus 66 --~~D~V~-i~tp~~-~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 66 --KCDCIF-LHSSTE-THYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp --TCSEEE-ECCCGG-GHHHHHHHHHH-TTCEEEE
T ss_pred --cCCEEE-EeCCcH-hHHHHHHHHHH-CCCcEEE
Confidence 799988 555553 45555554433 2456553
No 428
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=51.66 E-value=11 Score=40.29 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 364 588888763
No 429
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=51.60 E-value=31 Score=33.62 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=57.1
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc----cchhhcc-ccCCCC
Q 007156 352 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH----FKKPWAH-EHEPVK 425 (615)
Q Consensus 352 ~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~----~k~~fA~-~~~~~~ 425 (615)
+-...||+|.|| |-.|..+++.|++ .| -+++.+|+..- ......+.. ....+.. +..+..
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 76 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADAC 76 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHH
Confidence 345678999997 7777777777654 25 36888887421 000000110 0111111 222224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC---C-------------CHHHHHHHHccC-CCcEEEecC
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRT---F-------------TKEVVEAMASLN-EKPIIFSLS 470 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~---F-------------teevv~~Ma~~~-erPIIFaLS 470 (615)
++.++++.+++|++|=+.+.... . +..+++++.+.. .+.+||.=|
T Consensus 77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 57788888889999988775421 0 234667776655 367887543
No 430
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=51.52 E-value=13 Score=38.74 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=27.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999987531 12 57999998653
No 431
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=51.51 E-value=33 Score=34.36 Aligned_cols=102 Identities=18% Similarity=0.092 Sum_probs=56.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHH-HHHHHhcCCChhhhcCeEEEEccCCcccc--CC---ccCccc----c-------c---
Q 007156 356 QRFLFLGA-GEAGTGIAELIA-LEISKQTNMPLEETRKKIWLVDSKGLIVS--SR---LESLQH----F-------K--- 414 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~-~~~~~~~Gls~eeArk~i~lvD~~GLi~~--~R---~~~L~~----~-------k--- 414 (615)
.+|+|.|| |-.|..+++.|+ + .| .+++++|+..--.. +. .+.+.. . .
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRD-----TN-------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRY 70 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-----CC-------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHh-----CC-------CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCce
Confidence 48999996 777777777776 3 35 36888886421000 00 001100 0 0
Q ss_pred hhhcc-ccCCCCCHHHHHhccC-CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEec
Q 007156 415 KPWAH-EHEPVKELVDAVNAIK-PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSL 469 (615)
Q Consensus 415 ~~fA~-~~~~~~~L~e~V~~vk-PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaL 469 (615)
..+.. +..+..++.++++..+ +|++|=+.+.... -+..++++|.+..-+.|||.=
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEEC
Confidence 01111 1112235677787666 9999988875431 133567777766666788853
No 432
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=51.50 E-value=13 Score=39.01 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3579999999999999998865 25 3799999854
No 433
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=51.48 E-value=13 Score=39.39 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=25.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~ 36 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEAR 36 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCC
Confidence 45799999999999999998753 5 256666654
No 434
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=51.40 E-value=12 Score=36.46 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=24.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.--++|+|||.||+..|-.+.. .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999988755543 35 468889874
No 435
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=51.28 E-value=32 Score=35.00 Aligned_cols=48 Identities=15% Similarity=0.233 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
....+.+++..+....+++|+|.|||..|..++.++.. .| -+++.+|+
T Consensus 172 ~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-------a~Vi~~~~ 219 (366)
T 1yqd_A 172 GITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-------SKVTVIST 219 (366)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEES
T ss_pred HHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeC
Confidence 33445667666655478999999999888777665532 35 25887775
No 436
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=51.14 E-value=8.6 Score=39.66 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=50.7
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhcc
Q 007156 356 QRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 434 (615)
Q Consensus 356 ~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 434 (615)
.||.|+|+| .+|...+..|... .+ .+-+.++|++ . +......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~------~~l~av~d~~----~---~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH----PD------AQIVAACDPN----E---DVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC----TT------EEEEEEECSC----H---HHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC----CC------eEEEEEEeCC----H---HHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 8887777666431 12 1334466653 1 1122222222 122347899999988
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEE
Q 007156 435 KPTILIGTSGQGRTFTKEVVEAMASLNEKPII 466 (615)
Q Consensus 435 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 466 (615)
++|+++ ++++. .+..++++...+. -++|+
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899988 55544 3445555543332 34554
No 437
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.73 E-value=9.6 Score=38.95 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 402 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi 402 (615)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4689999999999999988843 12 79999986543
No 438
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=50.64 E-value=38 Score=32.40 Aligned_cols=75 Identities=17% Similarity=0.281 Sum_probs=41.2
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----------c
Q 007156 352 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 420 (615)
Q Consensus 352 ~L~d~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 420 (615)
.+++.++||.||+ .-|.++|+.|+ + .| -+++++|++. +.+....+.+.. +
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 86 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLG----S-LG-------ARVVLTARDV-------EKLRAVEREIVAAGGEAESHACD 86 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHH----H-TT-------CEEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH----H-CC-------CEEEEEECCH-------HHHHHHHHHHHHhCCceeEEEec
Confidence 4677899999974 34445555554 3 35 3688888741 112222222111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCC
Q 007156 421 HEPVKELVDAVNAI-----KPTILIGTSGQ 445 (615)
Q Consensus 421 ~~~~~~L~e~V~~v-----kPtvLIG~S~~ 445 (615)
..+..++.++++.+ ++|+||=..+.
T Consensus 87 ~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 12223455555554 79999987775
No 439
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=50.61 E-value=20 Score=33.52 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=23.5
Q ss_pred CCCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAG-sAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.++++.++||.||+ -.|..+|+.| .+ .| -+++++|++
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l----~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITF----AT-AG-------ASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHH----HT-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHH----HH-CC-------CEEEEEcCC
Confidence 35778899999973 3344444444 33 35 368888874
No 440
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=50.59 E-value=31 Score=33.39 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.1
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8888888777754 24 368888753 111 0 1 111122223467788887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 470 (615)
+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988765321 02456677665443 6777543
No 441
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=50.48 E-value=31 Score=34.08 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccc-----cchhhcc-ccCCCC
Q 007156 353 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-----FKKPWAH-EHEPVK 425 (615)
Q Consensus 353 L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~-----~k~~fA~-~~~~~~ 425 (615)
+++.+|+|.|| |-.|..+++.|++ .| .+++++|+.. .+...+.. .+..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 34578999996 7788888877764 25 3688888742 11111110 0111111 112223
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccC-CCcEEEecC
Q 007156 426 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 470 (615)
Q Consensus 426 ~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 470 (615)
++.++++.+++|++|=+.+.... -+..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788887789999988875321 0233566665544 467888655
No 442
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.48 E-value=35 Score=33.97 Aligned_cols=45 Identities=22% Similarity=0.187 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 342 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 342 ll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
.+.+++..+. -..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 152 a~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 152 TYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred EEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 4556666654 3567999999999886555444322 23 57888876
No 443
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=50.34 E-value=38 Score=33.81 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=56.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCcccc----------chhhcc-ccCC
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-EHEP 423 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~----------k~~fA~-~~~~ 423 (615)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--.. ...+... ...+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSFN--TGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSCC--CTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCccccc--hhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777777764 25 36888887521000 0012111 011111 1122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCC---CcEEEecC
Q 007156 424 VKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNE---KPIIFSLS 470 (615)
Q Consensus 424 ~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~e---rPIIFaLS 470 (615)
..++.++++.+++|++|=+.+.... -+..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888889999988775421 02345666655443 56777543
No 444
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=50.33 E-value=11 Score=41.03 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 4689999999999999988862 1353 789999864
No 445
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=50.32 E-value=32 Score=33.07 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=41.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-------ccccCC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AHEHEP 423 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f-------A~~~~~ 423 (615)
.++++.++||.||+. ||...++..+.+ .| -+++++|++. +.+....+.+ .-|..+
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 64 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDILD-------EEGKAMAAELADAARYVHLDVTQ 64 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHTGGGEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhhcCceEEEecCCC
Confidence 357788999999754 333444444443 35 3688888741 1121111111 112222
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 424 VKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 424 ~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..++.++++.+ ++|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666644 799999777643
No 446
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=50.24 E-value=23 Score=34.44 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=40.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-cccCCCCCHH
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELV 428 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~ 428 (615)
+.++.++++||.||++ ||...++..+.+ .| -+++++|++- ++.+.+...+..+. -|..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EG-------HPLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TT-------CCEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 4457788999999853 344444444443 36 3688888741 11011111111111 1222223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 007156 429 DAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 429 e~V~~v-----kPtvLIG~S~~~ 446 (615)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 556544 789999777653
No 447
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=50.21 E-value=14 Score=37.73 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=20.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALE 377 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~ 377 (615)
.+|+|+|||-+|+..|..|.+.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~ 27 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE 27 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHh
Confidence 5899999999999999999875
No 448
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=50.21 E-value=6.2 Score=39.97 Aligned_cols=134 Identities=15% Similarity=0.195 Sum_probs=74.2
Q ss_pred eeEEEEeeCcccccCCCCCCcccccchhhHHHHhhhcCCCCCceeeeeecCCCCccccc------cCcccccccc----c
Q 007156 234 IQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLL------DDEFYIGLRQ----K 303 (615)
Q Consensus 234 v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL------~Dp~YlGlr~----~ 303 (615)
.++.+|||.+.=|--..+--. ||. .+|+.+-+| +++.. .+.||--++. +
T Consensus 4 Mki~IvtDSt~dl~~e~~~~~----------------~I~---vvPl~v~~~--~~~y~D~~di~~~efy~~~~~~~~~p 62 (285)
T 3lup_A 4 MKLALITDTSAYLPEAIENHE----------------DVY---VLDIPIIID--GKTYIEGQNLTLDQYYDKLAASKELP 62 (285)
T ss_dssp CCEEEEEETTBCCCTTTTTCT----------------TEE---EECCCEESS--SSCCCBTTTBCHHHHHHHHHHCSSCC
T ss_pred CCEEEEEECCCCCCHHHHHHC----------------CeE---EEEEEEEEC--CEEEecCCCCCHHHHHHHHHhCCCCc
Confidence 369999999874432222111 455 677777664 23333 2456654432 3
Q ss_pred CCChhhHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHH-HHhc
Q 007156 304 RAIGQEYAELLHEFMTAVKQNYGERILIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEI-SKQT 382 (615)
Q Consensus 304 Ri~g~ey~~~vdeFv~Av~~~~gp~vliQGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~-~~~~ 382 (615)
.-+.+...+|.+-|-+.+++-| ..++. =|=+-.|.|-+++.+.......+.+|-++=..+++.|..-++..+. ..++
T Consensus 63 ~TSqps~~~~~~~f~~l~~~g~-d~ii~-i~iSs~LSGTy~sA~~a~~~~~~~~I~ViDS~~~s~g~g~~v~~A~~l~~~ 140 (285)
T 3lup_A 63 KTSQPSLAELDDLLCQLEKEGY-THVLG-LFIAAGISGFWQNIQFLIEEHPNLTIAFPDTKITSAPQGNLVRNALMCSRE 140 (285)
T ss_dssp EECCCCHHHHHHHHHHHHHTTC-CEEEE-CCSCGGGCTHHHHHTTHHHHCTTSEEECCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred eeCCCCHHHHHHHHHHHHHcCC-CeEEE-EeCCCchhHHHHHHHHHHHhCCCCCEEEEcCCchHHHHHHHHHHHHHHHHc
Confidence 4455666667666655555445 44443 0000011222222222223455678999988888888887776653 2347
Q ss_pred CCChhhhc
Q 007156 383 NMPLEETR 390 (615)
Q Consensus 383 Gls~eeAr 390 (615)
|.|.+|..
T Consensus 141 G~s~eeI~ 148 (285)
T 3lup_A 141 GMDFDVIV 148 (285)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 99998853
No 449
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=50.21 E-value=10 Score=38.50 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=30.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57899999999999999999998763 4 468888864
No 450
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.09 E-value=15 Score=35.64 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=55.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc------ccCCCCCHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHEPVKELVD 429 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~------~~~~~~~L~e 429 (615)
.||.|+|+|..|..+|..|... | .+++++|++.- +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999888652 4 37888887521 10111100000000 0000012222
Q ss_pred HHhcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007156 430 AVNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 474 (615)
Q Consensus 430 ~V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 474 (615)
+.+.+ +.|++| ++... -..+++++.++.+- +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22211 478777 33333 24688888887643 4678888998663
No 451
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=50.05 E-value=15 Score=39.07 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=28.4
Q ss_pred CceEEEeCcChHHHHHHHHHHH-HHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIAL-EISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~-~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|+|+|||.||+..|..|.. ... . .+-..+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~--~----~~~g~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADT--T----EDLDMAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHH--S----TTCCEEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCcc--c----cCCCCeEEEEecC
Confidence 4689999999999999999976 421 0 0001479999986
No 452
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=50.04 E-value=33 Score=32.90 Aligned_cols=78 Identities=23% Similarity=0.270 Sum_probs=42.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc----------cc
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------HE 420 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA----------~~ 420 (615)
.+|++.++||.||+. ||...++..+.+ .| -+++++|++- +.+......+. -+
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 69 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAK-AG-------ASVVVTDLKS-------EGAEAVAAAIRQAGGKAIGLECN 69 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHH-HT-------CEEEEEESSH-------HHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEECC
Confidence 468889999999854 333444444443 25 3688888741 11222111111 11
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 421 HEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 421 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..+..++.++++.+ ++|+||=..+..
T Consensus 70 v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11223455555544 799999777654
No 453
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=50.02 E-value=13 Score=39.13 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EG-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3579999999999999987754 35 3699999853
No 454
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=49.97 E-value=60 Score=30.75 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=40.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHH
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 431 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 431 (615)
++++.++||.||+. ||...++..+.+ .| -+++++|++--+ .... -..+.-|..+..++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999743 333444444443 35 368888875211 0010 001111222223455566
Q ss_pred hcc-----CCcEEEEccCCC
Q 007156 432 NAI-----KPTILIGTSGQG 446 (615)
Q Consensus 432 ~~v-----kPtvLIG~S~~~ 446 (615)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 544 799999777643
No 455
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=49.91 E-value=11 Score=40.06 Aligned_cols=34 Identities=18% Similarity=0.514 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 4689999999999999987754 363 688899874
No 456
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=49.85 E-value=26 Score=35.25 Aligned_cols=123 Identities=17% Similarity=0.256 Sum_probs=70.1
Q ss_pred eEEEEeeCcccccCCCCCCcccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccc-----ccC-cccccccc----cC
Q 007156 235 QVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKL-----LDD-EFYIGLRQ----KR 304 (615)
Q Consensus 235 ~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~L-----L~D-p~YlGlr~----~R 304 (615)
++.||||.+.=| |.--+ ... ||. .+|+.+-.| +++. =.+ .||--++. +.
T Consensus 6 ki~IvtDSt~dl------------~~e~~---~~~-~I~---vvPl~v~~~--~~~y~D~~i~~~~efy~~~~~~~~~p~ 64 (282)
T 2g7z_A 6 TIKIVTDSSITI------------EPELI---KAL-DIT---VVPLSVMID--SKLYSDNDLKEEGHFLSLMKASKSLPK 64 (282)
T ss_dssp CEEEEEETTBCC------------CHHHH---HHH-TCE---EECCEEEET--TEEEEGGGCCSTTHHHHHHHHCSSCCE
T ss_pred CeEEEEecCCCC------------CHHHH---HhC-CeE---EEEEEEEEC--CEEEecCCCChHHHHHHHHHhCCCCcc
Confidence 589999998622 22211 111 677 888888885 2333 234 67755542 34
Q ss_pred CChhhHHHHHHHHHHHHHHHhCccccc-------ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007156 305 AIGQEYAELLHEFMTAVKQNYGERILI-------QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALE 377 (615)
Q Consensus 305 i~g~ey~~~vdeFv~Av~~~~gp~vli-------QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~ 377 (615)
-+.+.-.+|++-|-+.+++-| ..++. -||=- ++.+++- . .+.+|-++=..+++.|..-++..+
T Consensus 65 TSqps~~~~~~~f~~l~~~gy-~~ii~i~iSs~LSGTy~---sA~~aa~-~-----~~~~I~ViDS~~~s~g~g~~v~~A 134 (282)
T 2g7z_A 65 TSQPPVGLFAETYENLVKKGV-TDIVAIHLSPALSGTIE---ASRQGAE-I-----AEAPVTVLDSGFTDQAMKFQVVEA 134 (282)
T ss_dssp EECCCHHHHHHHHHHHHHTTC-CEEEEEECCTTTCTHHH---HHHHHHH-H-----HTCCEEEEECSSCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCC-CeEEEEECCCcHhHHHH---HHHHHHh-C-----CCCeEEEECCCchhHHHHHHHHHH
Confidence 455566666666655554434 45554 34321 2222221 1 245788888777777777666554
Q ss_pred --HHHhcCCChhhh
Q 007156 378 --ISKQTNMPLEET 389 (615)
Q Consensus 378 --~~~~~Gls~eeA 389 (615)
|.+ +|.|.+|.
T Consensus 135 ~~l~~-~G~s~~eI 147 (282)
T 2g7z_A 135 AKMAK-AGASLNEI 147 (282)
T ss_dssp HHHHH-HTCCHHHH
T ss_pred HHHHH-cCCCHHHH
Confidence 444 69999885
No 457
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=49.83 E-value=13 Score=39.53 Aligned_cols=36 Identities=28% Similarity=0.456 Sum_probs=27.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999886530 003 3799999874
No 458
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=49.80 E-value=19 Score=35.31 Aligned_cols=78 Identities=17% Similarity=0.284 Sum_probs=39.2
Q ss_pred CCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-----------
Q 007156 350 GGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW----------- 417 (615)
Q Consensus 350 g~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f----------- 417 (615)
..++++.++||.||++ .|.++|+.|+ + .| -+++++|++- +.+......+
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~ 88 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALS----A-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAV 88 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHH----H-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHH----H-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEE
Confidence 3567889999999753 3444444443 3 36 3688888741 1122211111
Q ss_pred ccccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 418 AHEHEPVKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 418 A~~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.-|..+..++.++++.+ +.|+||=..+..
T Consensus 89 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 89 VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11222223455566655 799999877754
No 459
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=49.76 E-value=18 Score=36.81 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=27.8
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 343 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 343 l~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
+.|+...+.--.+++|+|.|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 4444333344467899999999877666655432 352 6887775
No 460
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=49.69 E-value=9.7 Score=37.63 Aligned_cols=33 Identities=18% Similarity=0.492 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
...|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 468999999999999998885 1 5 3688999874
No 461
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=49.63 E-value=18 Score=34.54 Aligned_cols=77 Identities=19% Similarity=0.222 Sum_probs=41.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhc-------cccCCC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHEPV 424 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA-------~~~~~~ 424 (615)
+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+. -|..+.
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RG-------AKVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57788999999854 333344444443 36 3688887641 11222221111 122222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007156 425 KELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 425 ~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.++.++++.+ +.|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556544 799999877654
No 462
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=49.53 E-value=15 Score=38.47 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=28.6
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 353 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 353 L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
-...+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999988653 5 378888876
No 463
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=49.47 E-value=14 Score=38.69 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
..|+|+|||.||+..|-.+.+ .| .++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EG-------ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC
Confidence 579999999999999988764 35 36999998653
No 464
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=49.47 E-value=21 Score=33.53 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=24.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~k~vlITGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGS---GIGLEICRAFAA-SG-------ARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999743 344444444443 35 368888874
No 465
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=49.43 E-value=31 Score=33.09 Aligned_cols=77 Identities=18% Similarity=0.213 Sum_probs=42.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc----------cc
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 421 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~~ 421 (615)
++++.++||.||++ ||..-++..+.+ .| -+++++|++. +.+...+..+.. |.
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EG-------FTVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 56788999999864 344444444444 36 3689988741 123222222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEEccCCC
Q 007156 422 EPVKELVDAVNAI----KPTILIGTSGQG 446 (615)
Q Consensus 422 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 446 (615)
.+..++.++++.+ +.|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 2223455555554 789999776653
No 466
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=49.33 E-value=42 Score=33.52 Aligned_cols=79 Identities=20% Similarity=0.338 Sum_probs=51.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
||+|.|| |-.|-.+++.|++. |. -+++.+|+. .+..+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888888653 42 267777764 111346677775
Q ss_pred CcEEEEccCCCCC------------CCHHHHHHHHccCCC-cEEEecC
Q 007156 436 PTILIGTSGQGRT------------FTKEVVEAMASLNEK-PIIFSLS 470 (615)
Q Consensus 436 PtvLIG~S~~~g~------------Fteevv~~Ma~~~er-PIIFaLS 470 (615)
+|++|=+.+.... .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999976654321 245688888766555 6777543
No 467
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=49.30 E-value=42 Score=32.29 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=52.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhcc
Q 007156 357 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 434 (615)
Q Consensus 357 riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 434 (615)
||+|.|| |-.|..+++.|++ .| -+++.+|+.. ......+ .....+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFV-NPSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGS-CTTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhc-CCCceEEECccccHH-HHhhcC--
Confidence 7999998 8888888888765 25 3688887642 1111101 11111111 111222 444444
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHccCCCcEEEecC
Q 007156 435 KPTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 435 kPtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 470 (615)
.|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 3999988774321 1 235677777666678888654
No 468
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=49.24 E-value=44 Score=32.15 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=23.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++++.++||.||.. ||...|+..+.+ .| -+++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G-------~~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QG-------LKVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 36778999998743 344444444443 35 368888874
No 469
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=49.22 E-value=15 Score=41.44 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 354 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 354 ~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
...+|||+|||.||+..|..|.+ .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 34689999999999999998865 25 3699999863
No 470
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=49.12 E-value=34 Score=34.38 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCCCCC--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 337 VVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 337 VvLAgll~Alr~~g~~L~d--~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..++..+.|+...++--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 141 ~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 141 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp HHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred cHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 3444555566333333346 89999998 8888777766643 353 478888873
No 471
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=49.11 E-value=15 Score=37.20 Aligned_cols=128 Identities=17% Similarity=0.222 Sum_probs=70.3
Q ss_pred eEEEEeeCcccccCCCCCCcccccchhhHHHHhhhcCCCCCceeeeeecCCCCcccccc------Ccccccccc---cCC
Q 007156 235 QVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLD------DEFYIGLRQ---KRA 305 (615)
Q Consensus 235 ~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~------Dp~YlGlr~---~Ri 305 (615)
++.||||.+.=| |.-- ... -||. .+|+.+-.| +++..+ +.||--++. +.-
T Consensus 4 ki~IvtDSt~dl------------~~e~---~~~-~~I~---vvPl~v~~~--~~~y~D~~di~~~efy~~~~~~~~p~T 62 (289)
T 1pzx_A 4 PIEIITDSGADL------------PQSY---IRE-HRIA---FLPLVVHWN--GQDYKDGITIEPKQVYDAMRQGHTVKT 62 (289)
T ss_dssp CCEEEEEGGGCC------------CHHH---HHH-TTCE---EECCEEEET--TEEEEBTTTBCHHHHHHHHTTTCCCEE
T ss_pred CEEEEEECCCCC------------CHHH---Hhh-CCeE---EEEEEEEEC--CEEEecCCCCCHHHHHHHHHhCCCCee
Confidence 578999998622 2211 111 2677 888888886 233333 456655543 344
Q ss_pred ChhhHHHHHHHHHHHHHHHhCccccc-------ccchHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007156 306 IGQEYAELLHEFMTAVKQNYGERILI-------QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEI 378 (615)
Q Consensus 306 ~g~ey~~~vdeFv~Av~~~~gp~vli-------QGTAaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~ 378 (615)
+.+...+|++-|-+.+++ . ..++. -||=- ++.+++ ........+.+|-++=..+++.|..-++..+.
T Consensus 63 Sqps~~~~~~~f~~l~~~-g-~~ii~i~iSs~LSGTy~---sA~~aa-~~~~ee~~~~~I~ViDS~~~s~g~g~~v~~A~ 136 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKE-N-RPCLYIAFSSKLSGTYQ---TAMAVR-SELLDEYPEFRLTIIDSKCASLGQGLAVMKAV 136 (289)
T ss_dssp ECCCHHHHHHHHHHHHHT-T-CCEEEEECCTTTCSHHH---HHHHHH-HHHHHHSTTCCEEEEECCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhC-C-CeEEEEECCCchhHHHH---HHHHHH-HhhHhhCCCCeEEEEcCchhhHHHHHHHHHHH
Confidence 455556666666444443 3 35554 44322 222222 12112234558888888777777777765542
Q ss_pred -HHhcCCChhhh
Q 007156 379 -SKQTNMPLEET 389 (615)
Q Consensus 379 -~~~~Gls~eeA 389 (615)
..++|.|.+|.
T Consensus 137 ~l~~~G~s~eeI 148 (289)
T 1pzx_A 137 ELAKQNTPYNLL 148 (289)
T ss_dssp HHHHTTCCHHHH
T ss_pred HHHHcCCCHHHH
Confidence 23469999885
No 472
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=49.11 E-value=42 Score=30.52 Aligned_cols=49 Identities=12% Similarity=0.201 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~G-AGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
++..+.+++....--.++++++.| +|..|..+++++... | -+++.+|++
T Consensus 23 ~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 23 YLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 334444554333344578999999 488888887766532 5 268888763
No 473
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=49.07 E-value=9.5 Score=36.45 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=55.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcc-ccCCCCCHHHHHhc
Q 007156 356 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 433 (615)
Q Consensus 356 ~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 433 (615)
.+|+|.|| |-.|..+++.|++. ..| -+++.+|++. ++...+......+.. +..+..++.++++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc
Confidence 37899998 88888887777531 002 3688887741 111111111111111 21222457777775
Q ss_pred cCCcEEEEccCCCC------CCCHHHHHHHHccCCCcEEEecC
Q 007156 434 IKPTILIGTSGQGR------TFTKEVVEAMASLNEKPIIFSLS 470 (615)
Q Consensus 434 vkPtvLIG~S~~~g------~Fteevv~~Ma~~~erPIIFaLS 470 (615)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 --~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 --VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp --CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998877531 01356777777666667887543
No 474
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=49.05 E-value=35 Score=31.69 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=37.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh-----c-cccCCCCCHH
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-----A-HEHEPVKELV 428 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f-----A-~~~~~~~~L~ 428 (615)
+.+++|.||+. ||...++..+.+ .| -+++++|++. +.+......+ . -+..+..++.
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~ 66 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KG-------YRVGLMARDE-------KRLQALAAELEGALPLPGDVREEGDWA 66 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHSTTCEEEECCTTCHHHHH
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHhhhceEEEecCCCHHHHH
Confidence 46789998743 344444444443 35 3688888741 1122111111 1 1112223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 007156 429 DAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 429 e~V~~v-----kPtvLIG~S~~~ 446 (615)
++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~id~li~~Ag~~ 89 (234)
T 2ehd_A 67 RAVAAMEEAFGELSALVNNAGVG 89 (234)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555544 789999877654
No 475
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=48.92 E-value=13 Score=38.60 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 401 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GL 401 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999988765 35 36899998653
No 476
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=48.84 E-value=12 Score=40.00 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHH-------hcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISK-------QTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~-------~~Gls~eeArk~i~lvD~~G 400 (615)
..+|||+|||.||...|-.|...... ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999998764310 0243 688898753
No 477
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=48.69 E-value=12 Score=39.08 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=19.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 007156 356 QRFLFLGAGEAGTGIAELIALE 377 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~ 377 (615)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999888653
No 478
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=48.66 E-value=15 Score=40.09 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+..|||+|+|.+|+++|-.+.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4689999999999999998865 364 588999764
No 479
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=48.64 E-value=41 Score=32.03 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=24.2
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 351 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 351 ~~L~d~riv~~GAGs-AG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..|+++++||.||+. .|.++|+.|+ + .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~----~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYA----R-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHH----H-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 458889999999854 3444444443 3 36 368888874
No 480
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=48.62 E-value=39 Score=34.17 Aligned_cols=45 Identities=16% Similarity=0.069 Sum_probs=28.7
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 343 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 343 l~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
+.++......-..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333333457899999999888766655433 253 47888875
No 481
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=48.60 E-value=14 Score=38.83 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 52 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAE-----LG-------ARAAVVESH 52 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEecC
Confidence 4689999999999999988865 25 468899965
No 482
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=48.59 E-value=21 Score=36.89 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
..+|+|+|||-+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998764 41 14688888753
No 483
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=48.53 E-value=25 Score=35.40 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=51.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 435 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 435 (615)
.||.|+|+|..|...++.+.. +..+ .+-+.++|++ . +......+.|--......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~------~~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSG------AEIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSS------EEEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCC------cEEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988776665542 1112 1223466663 1 1122222222100112468999999878
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 436 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 436 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
+|+++ ++++. ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44444 45566666554433 55554
No 484
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=48.46 E-value=15 Score=37.78 Aligned_cols=34 Identities=24% Similarity=0.524 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999998864 24 5788888853
No 485
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=48.41 E-value=13 Score=38.26 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|-.|.+ .|.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCC
Confidence 589999999999999998865 3531 278888774
No 486
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=48.39 E-value=15 Score=37.91 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=50.7
Q ss_pred HHHHHhCCCCCC-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccC
Q 007156 344 SAMKFLGGSLAD-QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE 422 (615)
Q Consensus 344 ~Alr~~g~~L~d-~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~ 422 (615)
+.-.+....+++ .||-|+|+|..|-.-++.+.........+ .+-.+=+-++|++ . +....+.+.|--. .
T Consensus 14 ~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~---~~a~~~a~~~~~~-~ 83 (412)
T 4gqa_A 14 GTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----Q---AMAERHAAKLGAE-K 83 (412)
T ss_dssp -----------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----H---HHHHHHHHHHTCS-E
T ss_pred ccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----H---HHHHHHHHHcCCC-e
Confidence 333444455665 69999999988866555554331110001 0111223456652 1 1122222222110 1
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCCCCHHHH-HHHHc----cCCCcE
Q 007156 423 PVKELVDAVNAIKPTILIGTSGQGRTFTKEVV-EAMAS----LNEKPI 465 (615)
Q Consensus 423 ~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv-~~Ma~----~~erPI 465 (615)
-..++.|.++.-++|+++ ++++. .+-.+++ ++|.+ .+|+|+
T Consensus 84 ~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 84 AYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp EESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHHTTCEEEEESCS
T ss_pred EECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHHcCCCeEeecCC
Confidence 136899999988899877 66655 3444444 44543 345554
No 487
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=48.34 E-value=24 Score=33.31 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=42.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhh------c-cccCC
Q 007156 351 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------A-HEHEP 423 (615)
Q Consensus 351 ~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~f------A-~~~~~ 423 (615)
.++++.++||.||.. ||...++..+.+ .| -+++++|++- . .+....+.+ . -+..+
T Consensus 8 ~~~~~k~vlVTGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 69 (265)
T 2o23_A 8 RSVKGLVAVITGGAS---GLGLATAERLVG-QG-------ASAVLLDLPN----S---GGEAQAKKLGNNCVFAPADVTS 69 (265)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---SHHHHHHHHCTTEEEEECCTTC
T ss_pred cCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCc----H---hHHHHHHHhCCceEEEEcCCCC
Confidence 467889999999843 344444444444 35 3688888741 1 122211111 1 11122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007156 424 VKELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 424 ~~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
..++.++++.+ ++|+||=..+..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 70 EKDVQTALALAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence 23456666654 799999777653
No 488
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=48.32 E-value=13 Score=36.22 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=25.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 357 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 357 riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
||.|+|+|..|..+|..|... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 799999999999999988642 53 58888874
No 489
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=48.28 E-value=24 Score=35.61 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=81.5
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhccccCCCCCHHHHHhc
Q 007156 355 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 433 (615)
Q Consensus 355 d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 433 (615)
+.||+++|| |.-|.-+++.+.+. |. +-++.||.+.- +. . .. ..+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-----g~------~~v~~VnP~~~---g~-~-i~--------G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-----GT------KIVAGVTPGKG---GM-E-VL--------GVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-ET--------TEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-----CC------eEEEEECCCCC---Cc-e-EC--------CEEeeCCHHHHhhc
Confidence 478999999 98887777765442 53 35677877531 10 0 00 01112579998885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCC-cEEEecCCCCCcCCCCHHHHhccc--CCcEEEeeCCCCCCcccCCeeeC
Q 007156 434 IKPTILIGTSGQGRTFTKEVVEAMASLNEK-PIIFSLSNPTSQSECTAEEAYTWS--QGRAIFASGSPFDPFEYGDNVFV 510 (615)
Q Consensus 434 vkPtvLIG~S~~~g~Fteevv~~Ma~~~er-PIIFaLSNPts~aEctpedA~~wT--~GraifASGSPF~pV~~~G~~~~ 510 (615)
.+||+.| +..++ .+..++++...+..-+ -|||+--= +|..-+++.+.. .|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~----~~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFVPA-PAAADAALEAAHAGIPLIVLITEGI----PTLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECCCH-HHHHHHHHHHHHTTCSEEEECCSCC----CHHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEEEECCCC----CHHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 5799988 44433 5788999988776554 34554211 221122333321 35456654443 2445
Q ss_pred cCCCccccccchh----hHHHHHcCCcccCHHHHH
Q 007156 511 PGQANNAYIFPGL----GLGLIMSGAIRVHDDMLL 541 (615)
Q Consensus 511 p~Q~NN~yiFPGi----glG~l~s~a~~Itd~M~l 541 (615)
|+++.|.. ||+. |-=++.||.-.++-+++.
T Consensus 129 ~~~~~~~~-~~~~~~~~G~va~vsqSG~l~~~~~~ 162 (288)
T 1oi7_A 129 AEETKIGI-MPGHVFKRGRVGIISRSGTLTYEAAA 162 (288)
T ss_dssp TTTEEEES-SCGGGCCEEEEEEEESCHHHHHHHHH
T ss_pred CCCceeEE-cccCCCCCCCEEEEECCHHHHHHHHH
Confidence 67766665 3332 222445555555544443
No 490
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=48.24 E-value=15 Score=38.40 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=25.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999988653 53 56666664
No 491
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=48.18 E-value=4.1 Score=43.09 Aligned_cols=94 Identities=11% Similarity=0.035 Sum_probs=46.7
Q ss_pred CCceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchhhcccc---CCCCCHHH
Q 007156 354 ADQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH---EPVKELVD 429 (615)
Q Consensus 354 ~d~riv~~GAGsAG~-GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~---~~~~~L~e 429 (615)
+..||.|+|+|..|. .+++.|.. ..+ .+-+.++|++ . +......+.|--.. .-..++.|
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~----~~~------~~lvav~d~~----~---~~~~~~a~~~g~~~~~~~~~~~~~~ 144 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAG----CQH------SRIEALVSGN----A---EKAKIVAAEYGVDPRKIYDYSNFDK 144 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTT----CSS------EEEEEEECSC----H---HHHHHHHHHTTCCGGGEECSSSGGG
T ss_pred CceEEEEECCcHHHHHHHHHHHhh----CCC------cEEEEEEcCC----H---HHHHHHHHHhCCCcccccccCCHHH
Confidence 346999999998885 56554421 111 1224567763 1 11222222221110 12457778
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 430 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 430 ~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
+++.-++|+++ +++.. .+..++++...+. .++|+.
T Consensus 145 ll~~~~vD~V~-iatp~-~~h~~~~~~al~a-Gk~Vl~ 179 (433)
T 1h6d_A 145 IAKDPKIDAVY-IILPN-SLHAEFAIRAFKA-GKHVMC 179 (433)
T ss_dssp GGGCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred HhcCCCCCEEE-EcCCc-hhHHHHHHHHHHC-CCcEEE
Confidence 88766788877 44434 3444554443322 245443
No 492
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=48.14 E-value=13 Score=37.88 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=52.2
Q ss_pred CCceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhh---cCeEEEEccCCccccCCccCccccchhhccc--cC
Q 007156 354 ADQRFLFLG-AGEAGTG-IA----ELIALEISKQTNMPLEET---RKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--HE 422 (615)
Q Consensus 354 ~d~riv~~G-AGsAG~G-IA----~ll~~~~~~~~Gls~eeA---rk~i~lvD~~GLi~~~R~~~L~~~k~~fA~~--~~ 422 (615)
+..||.|+| +|..|.. .+ +.+.. ..++....+ .-++.++|++ .+.. +.+|+. .+
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~~~~~~~~~av~~~~-------~~~a----~~~a~~~~~~ 69 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKNGDRIMPDPILVGRS-------AEKV----EALAKRFNIA 69 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTTSCEEEEEEEEECSS-------SHHH----HHHHHHTTCC
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecCCcccceeeEEEcCC-------HHHH----HHHHHHhCCC
Confidence 346899999 9999987 66 44432 222211000 0011245542 1112 233332 11
Q ss_pred C-CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007156 423 P-VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 467 (615)
Q Consensus 423 ~-~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 467 (615)
. ..++.|.++.-++|+++ +.++. .+..++++...+. .++|+.
T Consensus 70 ~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 70 RWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred cccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 1 37899999988899887 55544 4666666554432 356554
No 493
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=48.08 E-value=8.7 Score=40.06 Aligned_cols=33 Identities=39% Similarity=0.516 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 007156 356 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 400 (615)
Q Consensus 356 ~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~G 400 (615)
.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999988753 353 577888754
No 494
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=48.08 E-value=40 Score=34.15 Aligned_cols=38 Identities=13% Similarity=0.081 Sum_probs=26.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 350 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 350 g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
..--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333456899999999888766655432 253 47888875
No 495
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=47.96 E-value=40 Score=34.53 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 338 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 338 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
.++..+.|++. ..--.+++|+|+|||..|...+.+.. + .|. ++|+.+|+
T Consensus 170 ~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 34445566664 33345789999999988876655443 2 363 57888876
No 496
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=47.72 E-value=19 Score=38.32 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=26.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 397 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD 397 (615)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999998761 15 4799999
No 497
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=47.69 E-value=28 Score=33.24 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=41.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccccCCccCccccchh-------hccccCCC
Q 007156 352 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHEHEPV 424 (615)
Q Consensus 352 ~L~d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~GLi~~~R~~~L~~~k~~-------fA~~~~~~ 424 (615)
++++.++||.||+. ||...++..+.+ .| -+++++|++- +.+...... +.-+..+.
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~ 70 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AG-------ATVAIADLDV-------MAAQAVVAGLENGGFAVEVDVTKR 70 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHTCTTCCEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHhcCCeEEEEeCCCH
Confidence 47788999999753 344444444443 35 3688888742 111111111 11121222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007156 425 KELVDAVNAI-----KPTILIGTSGQG 446 (615)
Q Consensus 425 ~~L~e~V~~v-----kPtvLIG~S~~~ 446 (615)
.++.++++.+ ++|+||=..+..
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 71 ASVDAAMQKAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3455666644 799999877653
No 498
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=47.69 E-value=19 Score=38.20 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 007156 355 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 399 (615)
Q Consensus 355 d~riv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~~ 399 (615)
..+|+|+|+|.||+..|..|... |- ..+|.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 36899999999999999998753 31 2579999986
No 499
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=47.50 E-value=34 Score=34.41 Aligned_cols=48 Identities=25% Similarity=0.224 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 007156 339 LAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 398 (615)
Q Consensus 339 LAgll~Alr~~g~~L~d~riv~~GA-GsAG~GIA~ll~~~~~~~~Gls~eeArk~i~lvD~ 398 (615)
++..+.++...+.--.+++|+|.|| |..|..++.++.. .|. +++.+|+
T Consensus 144 ~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 3344455544444456789999998 8888777766543 352 6777776
No 500
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=47.47 E-value=11 Score=40.48 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=0.0
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE--EEccC
Q 007156 358 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW--LVDSK 399 (615)
Q Consensus 358 iv~~GAGsAG~GIA~ll~~~~~~~~Gls~eeArk~i~--lvD~~ 399 (615)
||++|||.+|+++|-.|.+......-+...+.....| ++|++
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~ 85 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQ 85 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESS
T ss_pred EEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEecc
Done!