Your job contains 1 sequence.
>007158
MSNQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM
DRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI
IKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT
HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG
LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA
LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA
SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN
MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNRAGNRDSCFRLEKVPAIS
GLCEGEECSSERTYE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007158
(615 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 2624 6.4e-273 1
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 2618 2.8e-272 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 1663 4.4e-171 1
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 1499 1.2e-160 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 1495 3.3e-160 2
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 1495 3.3e-160 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 1494 8.6e-160 2
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 1490 1.1e-159 2
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 1488 1.8e-159 2
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 1487 2.3e-159 2
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 1479 6.0e-159 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 1481 9.8e-159 2
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 1479 1.6e-158 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 1472 1.4e-157 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 1326 1.0e-143 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 1159 9.4e-122 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 1159 9.4e-122 2
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 1071 2.4e-108 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 1070 3.0e-108 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 1066 8.1e-108 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 1066 8.1e-108 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 1066 8.1e-108 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 1063 1.7e-107 1
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 1063 1.7e-107 1
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 1060 3.5e-107 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 1059 4.4e-107 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 1053 1.9e-106 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 1049 5.1e-106 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 1048 6.5e-106 1
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 975 2.8e-105 2
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 1036 1.2e-104 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 1036 1.2e-104 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 1035 1.6e-104 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 998 1.3e-100 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 772 3.7e-97 2
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 921 1.9e-92 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 486 4.2e-86 3
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 667 1.7e-80 2
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 777 3.4e-77 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 661 6.8e-69 2
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 347 2.2e-68 4
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 682 4.0e-67 1
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 682 4.0e-67 1
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 682 4.0e-67 1
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 682 4.0e-67 1
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 682 4.0e-67 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 680 6.5e-67 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 673 3.6e-66 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 662 5.2e-65 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 658 1.4e-64 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 658 1.4e-64 1
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 652 6.0e-64 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 652 6.0e-64 1
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 649 1.2e-63 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 646 2.6e-63 1
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 640 1.1e-62 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 640 1.1e-62 1
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 618 2.3e-62 2
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 636 3.0e-62 1
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 635 3.8e-62 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 625 4.3e-61 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 612 1.0e-59 1
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 600 1.9e-58 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 584 1.4e-56 1
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 551 2.3e-56 2
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 574 1.1e-55 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 568 4.8e-55 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 566 7.8e-55 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 557 7.0e-54 1
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 532 3.1e-51 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 532 3.1e-51 1
UNIPROTKB|I3L5Y8 - symbol:I3L5Y8 "Uncharacterized protein... 516 1.5e-49 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 506 2.1e-48 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 457 3.1e-47 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 457 3.1e-47 2
CGD|CAL0005748 - symbol:orf19.7497 species:5476 "Candida ... 356 1.8e-45 3
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 460 5.1e-43 1
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 460 5.1e-43 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 443 8.4e-42 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 445 2.1e-41 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 258 1.7e-40 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 265 6.7e-39 2
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 297 1.6e-37 3
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 413 3.0e-36 1
UNIPROTKB|H7C1L6 - symbol:CUL3 "Cullin-3" species:9606 "H... 373 6.4e-34 1
UNIPROTKB|A6NE76 - symbol:CUL4B "Cullin-4B" species:9606 ... 359 2.3e-32 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 379 5.0e-32 1
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 342 1.8e-30 1
RGD|1563853 - symbol:Cul4a "cullin 4A" species:10116 "Rat... 308 9.4e-27 1
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 286 2.3e-24 1
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 275 3.7e-23 1
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 279 5.4e-21 1
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 276 1.2e-20 1
UNIPROTKB|F1P9Q4 - symbol:CUL5 "Uncharacterized protein" ... 270 4.5e-20 1
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 270 5.0e-20 1
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 270 5.0e-20 1
WARNING: Descriptions of 22 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 2624 (928.8 bits), Expect = 6.4e-273, P = 6.4e-273
Identities = 496/580 (85%), Positives = 542/580 (93%)
Query: 1 MSNQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60
MSNQKKRNFQIEAFK RVVVDPKYA+KTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
Sbjct: 1 MSNQKKRNFQIEAFKQRVVVDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60
Query: 61 LHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM 120
LHK+G+KLY+GLV+TMT HLKEI KSIE AQGG+FLE LNRKWNDHNKALQMIRDILMYM
Sbjct: 61 LHKYGDKLYTGLVTTMTFHLKEICKSIEEAQGGAFLELLNRKWNDHNKALQMIRDILMYM 120
Query: 121 DRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 180
DRTY+ +T KT VHELGL+LWRDN+V S+KIQTRLLNTLL+LVH+ERTGEVI+R LMRN+
Sbjct: 121 DRTYVSTTKKTHVHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNV 180
Query: 181 IKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT 240
IKM MDLG SVYQ+DFEKPFLE SAEFYKVES +FIE CDCGEYLKKAE+ L EE+ERV
Sbjct: 181 IKMFMDLGESVYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVV 240
Query: 241 HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG 300
+YLDAKSEAKIT+VVE+EMIANH+ RLVHM+NSGLVNMLL+DKYED+GRMY+LFRRV +G
Sbjct: 241 NYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANG 300
Query: 301 LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
L+T+R+VMT HLRE GKQLVTDPE+ KDPVEFVQRLLDE+DKYD II+ AFNNDKTFQNA
Sbjct: 301 LVTVRDVMTLHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQNA 360
Query: 361 LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
LNSSFEYF+NLN RSPEFISLFVDDKLRKGLKGV EEDV+ ILDKVMMLFRYLQEKDVFE
Sbjct: 361 LNSSFEYFVNLNTRSPEFISLFVDDKLRKGLKGVGEEDVDLILDKVMMLFRYLQEKDVFE 420
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA 480
KYYKQHLAKRLLSGKTVSDDAER+LIVKLKTECGYQFTSKLEGMFTDMKTS DT+ FY
Sbjct: 421 KYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGFYN 480
Query: 481 SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN 540
SHPEL + TLVVQVLTTGSWPTQP++ CNLPAE+S LCEKFRSYYLGTHTGRRLSWQTN
Sbjct: 481 SHPELSEGPTLVVQVLTTGSWPTQPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTN 540
Query: 541 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
MG+ADIKA FGKGQKHELNVST+QMCVLMLFNN+DRLSY+
Sbjct: 541 MGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYK 580
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 2618 (926.6 bits), Expect = 2.8e-272, P = 2.8e-272
Identities = 493/580 (85%), Positives = 539/580 (92%)
Query: 1 MSNQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60
MSNQKKRNFQIEAFKHRVVVDPKYA+KTW+ILE AIH+IYN +ASGLSFEELYRNAYNMV
Sbjct: 1 MSNQKKRNFQIEAFKHRVVVDPKYADKTWQILERAIHQIYNQDASGLSFEELYRNAYNMV 60
Query: 61 LHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM 120
LHKFGEKLY+G ++TMT HLKE SK IEAAQGGSFLEELN+KWN+HNKAL+MIRDILMYM
Sbjct: 61 LHKFGEKLYTGFIATMTSHLKEKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYM 120
Query: 121 DRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 180
DRTYI ST KT VH +GLNLWRDN+V KI TRLLNTLL+LV +ER GEVI+RGLMRN+
Sbjct: 121 DRTYIESTKKTHVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNV 180
Query: 181 IKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT 240
IKM MDLG SVYQEDFEKPFL+ S+EFYKVESQ+FIE CDCG+YLKK+E+RL EE+ERV
Sbjct: 181 IKMFMDLGESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVA 240
Query: 241 HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG 300
HYLDAKSE KIT+VVEKEMIANHM RLVHM+NSGLVNMLL+DKYEDLGRMYNLFRRV +G
Sbjct: 241 HYLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNG 300
Query: 301 LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
L+T+R+VMTSHLRE GKQLVTDPE+ KDPVEFVQRLLDE+DKYD II++AF NDKTFQNA
Sbjct: 301 LVTVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNA 360
Query: 361 LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
LNSSFEYFINLN RSPEFISLFVDDKLRKGLKG+++ DVE ILDKVMMLFRYLQEKDVFE
Sbjct: 361 LNSSFEYFINLNARSPEFISLFVDDKLRKGLKGITDVDVEVILDKVMMLFRYLQEKDVFE 420
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA 480
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTS+DTM FY
Sbjct: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYG 480
Query: 481 SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN 540
SHPEL + TL+VQVLTTGSWPTQP+V CNLPAE+S LCEKFRSYYLGTHTGRRLSWQTN
Sbjct: 481 SHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTN 540
Query: 541 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
MG+ADIKA FGKGQKHELNVST+QMCVLMLFNN+DRLSY+
Sbjct: 541 MGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYK 580
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 1663 (590.5 bits), Expect = 4.4e-171, P = 4.4e-171
Identities = 316/570 (55%), Positives = 423/570 (74%)
Query: 16 HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVST 75
H V+ DP + ++TWK+L+ A+ +I+ NAS LSFEELYRN YNMVL K G+ LY+ L
Sbjct: 17 HGVLADPDFPKRTWKLLKTAMRQIHQQNASNLSFEELYRNGYNMVLQKHGDLLYNNLKKM 76
Query: 76 MTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHE 135
+ HLK ++K++ + FL ELN W +H ++ MIRDILMYMDR Y+ + + V +
Sbjct: 77 VDKHLKAVAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVKQNNLSSVFD 136
Query: 136 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVY 192
LGL L+RDN+ + I+ RLLNTLL +V +ER GEVI+R L++NI++ML+DLG +VY
Sbjct: 137 LGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVY 196
Query: 193 QEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKIT 252
EDFEKP L ++ Y+ +SQ I+ C C +Y+KK E L EE+ERV+HYLD+ SE K+
Sbjct: 197 IEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLK 256
Query: 253 NVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHL 312
V EK++I+NHM L+ M+NSGL++ML DDK EDL RMYNLF RV GL +++V++S++
Sbjct: 257 EVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYV 316
Query: 313 RETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 372
+E G+ +V D E+ K+ + Q LLD KDKYDN++ +A NDK F +++ +FEYFINLN
Sbjct: 317 KEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFINLN 376
Query: 373 PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLL 432
P+SPE+ISLF+D+KL+KGLKGVSEE+V+ ILDK++MLFR +QEKDVFEKYYKQHLAKRLL
Sbjct: 377 PKSPEYISLFIDEKLKKGLKGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLL 436
Query: 433 SGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELGDSRT 490
G+++SDDAER++I KLKTECGYQFTSKLEGMFTDM+ SQDTM F Y + +
Sbjct: 437 LGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKTYIQNLKKALPID 496
Query: 491 LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF 550
L V VLTTG WPTQ + CNLP E+ CE F+SYYL H GR L WQTNMG+A+IKA F
Sbjct: 497 LNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANF 556
Query: 551 GKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ HEL VS+YQM +L+LFN+ +L+++
Sbjct: 557 -PSKSHELQVSSYQMVILLLFNDQSKLTFK 585
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 1499 (532.7 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 301/565 (53%), Positives = 401/565 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDLG MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFNNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 ----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGR 533
A+ LG L V+VLTTG WPTQ + CN+P E FR +YL H+GR
Sbjct: 488 RQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 534 RLSWQTNMGSADIKATF-GKGQKHE 557
+L+ Q +MGSAD+ ATF G +K +
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 1495 (531.3 bits), Expect = 3.3e-160, Sum P(2) = 3.3e-160
Identities = 300/565 (53%), Positives = 400/565 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 ----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGR 533
A+ LG L V+VLTTG WPTQ + CN+P E FR +YL H+GR
Sbjct: 488 RQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 534 RLSWQTNMGSADIKATF-GKGQKHE 557
+L+ Q +MGSAD+ ATF G +K +
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 3.3e-160, Sum P(2) = 3.3e-160
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 1495 (531.3 bits), Expect = 3.3e-160, Sum P(2) = 3.3e-160
Identities = 300/565 (53%), Positives = 400/565 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 308 NGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 ----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGR 533
A+ LG L V+VLTTG WPTQ + CN+P E FR +YL H+GR
Sbjct: 488 RQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 534 RLSWQTNMGSADIKATF-GKGQKHE 557
+L+ Q +MGSAD+ ATF G +K +
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 3.3e-160, Sum P(2) = 3.3e-160
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 1494 (531.0 bits), Expect = 8.6e-160, Sum P(2) = 8.6e-160
Identities = 296/555 (53%), Positives = 394/555 (70%)
Query: 4 QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK 63
+K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK
Sbjct: 10 KKDTKMRIRAFP--MTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHK 67
Query: 64 FGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDR 122
GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR
Sbjct: 68 HGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 127
Query: 123 TYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIK 182
Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN +
Sbjct: 128 VYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQ 187
Query: 183 MLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 239
MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ERV
Sbjct: 188 MLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERV 247
Query: 240 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 299
H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP+
Sbjct: 248 IHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPN 307
Query: 300 GLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQN 359
GL T+ E M+S+LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 308 GLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQ 367
Query: 360 ALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 419
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++QEKDVF
Sbjct: 368 TIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVF 427
Query: 420 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 479
E+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 ERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFR 487
Query: 480 ASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRRL 535
G S L+V+VLTTG WPTQ + CN+P E FR +YL H+GR+L
Sbjct: 488 QHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQL 547
Query: 536 SWQTNMGSADIKATF 550
+ Q +MGSAD+ ATF
Sbjct: 548 TLQHHMGSADLNATF 562
Score = 84 (34.6 bits), Expect = 8.6e-160, Sum P(2) = 8.6e-160
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 541 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+G A + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 575 VGGAQV--TGSNTRKHILQVSTFQMTILMLFNNREKSTFE 612
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 1490 (529.6 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
Identities = 299/565 (52%), Positives = 399/565 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 308 NGLKTMCECMSCYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 ----YASHPELGDSRTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGR 533
A+ LG L V+VLTTG WPTQ + CN+P E FR +YL H+GR
Sbjct: 488 RQHLQATGVSLGGV-DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 534 RLSWQTNMGSADIKATF-GKGQKHE 557
+L+ Q +MGSAD+ ATF G +K +
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 1488 (528.9 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 296/551 (53%), Positives = 394/551 (71%)
Query: 17 RVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTM 76
++ +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +
Sbjct: 4 QMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVV 63
Query: 77 TLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHE 135
T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR Y+ + V+
Sbjct: 64 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 123
Query: 136 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVY 192
LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN +MLM LG SVY
Sbjct: 124 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVY 183
Query: 193 QEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKIT 252
+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ERV H LD +E I
Sbjct: 184 EEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIV 243
Query: 253 NVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHL 312
VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP+GL T+ E M+S+L
Sbjct: 244 KVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYL 303
Query: 313 RETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 372
RE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+ + FEYF+NLN
Sbjct: 304 REQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLN 363
Query: 373 PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLL 432
RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDVFE+YYKQHLA+RLL
Sbjct: 364 SRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLL 423
Query: 433 SGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF----YASHPELGDS 488
+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF A+ LG
Sbjct: 424 TNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGV 483
Query: 489 RTLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIK 547
L V+VLTTG WPTQ + CN+P E FR +YL H+GR+L+ Q +MGSAD+
Sbjct: 484 -DLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLN 542
Query: 548 ATF-GKGQKHE 557
ATF G +K +
Sbjct: 543 ATFYGPVKKED 553
Score = 87 (35.7 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 555 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 596
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 1487 (528.5 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 295/549 (53%), Positives = 391/549 (71%)
Query: 18 VVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMT 77
+ +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T
Sbjct: 1 MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVT 60
Query: 78 LHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHEL 136
HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR Y+ + V+ L
Sbjct: 61 EHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNL 120
Query: 137 GLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVYQ 193
GL ++RD +VR I+ L TLL+++ RER GEV++RG +RN +MLM LG SVY+
Sbjct: 121 GLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYE 180
Query: 194 EDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITN 253
EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ERV H LD +E I
Sbjct: 181 EDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVK 240
Query: 254 VVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLR 313
VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP+GL T+ E M+S+LR
Sbjct: 241 VVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLR 300
Query: 314 ETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNP 373
E GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+ + FEYF+NLN
Sbjct: 301 EQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNS 360
Query: 374 RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 433
RSPE++SLF+DDKL+KG+KG++E++VETILDK M+LFR++QEKDVFE+YYKQHLA+RLL+
Sbjct: 361 RSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLT 420
Query: 434 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSR---T 490
K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF G S
Sbjct: 421 NKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQSTGVSLGGVD 480
Query: 491 LVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 549
L V+VLTTG WPTQ + CN+P E FR +YL H+GR+L+ Q +MGSAD+ AT
Sbjct: 481 LTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNAT 540
Query: 550 F-GKGQKHE 557
F G +K +
Sbjct: 541 FYGPVKKED 549
Score = 87 (35.7 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 551 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 592
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 1479 (525.7 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 296/564 (52%), Positives = 397/564 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND+ F+
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 YASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRR 534
G S L V+VLTTG WPTQ + CN+P E FR +YL H+GR+
Sbjct: 488 RQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQ 547
Query: 535 LSWQTNMGSADIKATF-GKGQKHE 557
L+ Q +MGSAD+ ATF G +K +
Sbjct: 548 LTLQHHMGSADLNATFYGPVKKED 571
Score = 91 (37.1 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN D+ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFE 614
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 1481 (526.4 bits), Expect = 9.8e-159, Sum P(2) = 9.8e-159
Identities = 296/563 (52%), Positives = 395/563 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND+ F+
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 YASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRR 534
G S L V+VLTTG WPTQ + CN+P E FR +YL H+GR+
Sbjct: 488 RQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRRFYLAKHSGRQ 547
Query: 535 LSWQTNMGSADIKATFGKGQKHE 557
L+ Q +MGSAD+ ATF K E
Sbjct: 548 LTLQHHMGSADLNATFYGAVKKE 570
Score = 87 (35.7 bits), Expect = 9.8e-159, Sum P(2) = 9.8e-159
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 1479 (525.7 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 296/564 (52%), Positives = 397/564 (70%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
++K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLH
Sbjct: 10 SRKDTKMRIRAFP--MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLH 67
Query: 63 KFGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMD
Sbjct: 68 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 127
Query: 122 RTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNII 181
R Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN
Sbjct: 128 RVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNAC 187
Query: 182 KMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMER 238
+MLM LG SVY+EDFE PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ER
Sbjct: 188 QMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIER 247
Query: 239 VTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVP 298
V H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP
Sbjct: 248 VMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVP 307
Query: 299 SGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
+GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +F+ND+ F+
Sbjct: 308 NGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFK 367
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++QEKDV
Sbjct: 368 QTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDV 427
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 428 FERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF 487
Query: 479 YASHPELGDSR---TLVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRR 534
G S L V+VLTTG WPTQ + CN+P E FR +YL H+GR+
Sbjct: 488 RQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQ 547
Query: 535 LSWQTNMGSADIKATF-GKGQKHE 557
L+ Q +MGSAD+ ATF G +K +
Sbjct: 548 LTLQHHMGSADLNATFYGPVKKED 571
Score = 87 (35.7 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 573 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 614
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 1472 (523.2 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 293/556 (52%), Positives = 392/556 (70%)
Query: 4 QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK 63
+K +I AF + +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK
Sbjct: 9 KKDTKMRIRAFP--MTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHK 66
Query: 64 FGEKLYSGLVSTMTLHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDR 122
GEKLY+GL +T HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR
Sbjct: 67 HGEKLYTGLREVVTEHLINKVREDVLHSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDR 126
Query: 123 TYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIK 182
Y+ + V+ LGL ++RD +VR I+ L TLL+++ RER GEV++RG +RN +
Sbjct: 127 VYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQ 186
Query: 183 MLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 239
MLM LG SVY+EDFE PFL++SAEF+++ESQKF+ Y+KK E R+NEE+ERV
Sbjct: 187 MLMVLGLKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERV 246
Query: 240 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 299
H LD +E I VVE+E+I+ HM +V M+NSGLV+ML + K EDL MY LF RVP+
Sbjct: 247 MHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPN 306
Query: 300 GLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQN 359
GL T+ E M+ +LRE GK LV++ K+PV+++Q LLD K ++D + +FNND+ F+
Sbjct: 307 GLKTMCECMSWYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQ 366
Query: 360 ALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 419
+ FEYF+NLN RSPE++SLF+DDKL+KG+KG++E++VE+ILDK M+LFR++QEKDVF
Sbjct: 367 TIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVF 426
Query: 420 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 479
E+YYKQHLA+RLL+ K+VSDD+E+++I KLKTECG QFTSKLEGMF DM S TM EF
Sbjct: 427 ERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEF- 485
Query: 480 ASHPELGDSRT----LVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRR 534
H + L V+VLTTG WPTQ + CN+P E FR +YL H+GR+
Sbjct: 486 RHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQ 545
Query: 535 LSWQTNMGSADIKATF 550
L+ Q +MGSAD+ ATF
Sbjct: 546 LTLQHHMGSADLNATF 561
Score = 85 (35.0 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+++G T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 571 SDVGVGGALLTGSNTRKHILQVSTFQMTILMLFNNREKFTFE 612
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 1326 (471.8 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 273/546 (50%), Positives = 366/546 (67%)
Query: 20 VDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLH 79
+D KY E W L++AI EI N SGLSFE+LYRNAYNMVLHK G +LY GL ++ H
Sbjct: 184 MDEKYVETIWASLKNAIQEIQKKNNSGLSFEQLYRNAYNMVLHKHGNRLYYGLREVVSEH 243
Query: 80 LK-EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGL 138
L+ ++ + A +FL +LN+ W DH ++ MIRDILMYMDR Y+ V+ LGL
Sbjct: 244 LEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVDNVYNLGL 303
Query: 139 NLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVYQED 195
L+RD +VR ++IQ L LL +V ER GE IN ++N ML+ LG +VY+ED
Sbjct: 304 ILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYEED 363
Query: 196 FEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVV 255
FEKPFL SA FYK ESQ F+ + G Y+KK E R+ EE R YLD +E +I VV
Sbjct: 364 FEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRIVRVV 423
Query: 256 EKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS-GLLTIREVMTSHLRE 314
E+E+I HM +V M+NSG+V M+ + K EDL Y LF R+ GL I + M+++LRE
Sbjct: 424 EEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMSAYLRE 483
Query: 315 TGKQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNP 373
G+ LV + E +P+ FVQ LLD KD++D + +F ND+ F+N ++S FE+F+NLN
Sbjct: 484 QGRMLVKEEENGNTNPITFVQNLLDLKDRFDQFLVHSFANDRIFKNVISSDFEHFLNLNN 543
Query: 374 RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 433
+SPE++SLF+DDKL+KG KG+SE+++E+ILDK M+LFR+L EKDVFE+YYK HLAKRLL
Sbjct: 544 KSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLL 603
Query: 434 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELG-DSRT 490
K+VSDD E+++I KLKTECG QFTSKLEGMF DM S M EF + ++ L
Sbjct: 604 NKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMDEFKNFVNNNNLSLGGVE 663
Query: 491 LVVQVLTTGSWPTQPSV-TCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 549
L V++LTTG WPTQ + CN+PA + F+++YL H+GR+L+ Q MG+A I A
Sbjct: 664 LTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTLQPQMGTAYINAV 723
Query: 550 FGKGQK 555
F G+K
Sbjct: 724 F-YGRK 728
Score = 100 (40.3 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 554 QKHELNVSTYQMCVLMLFNNADRLSY 579
+KH L VSTYQMCVL+LFNN D L+Y
Sbjct: 753 RKHILQVSTYQMCVLLLFNNRDVLTY 778
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 1159 (413.0 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 247/567 (43%), Positives = 358/567 (63%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
N ++ +I F +D +Y +TW++L+ AI EI N SGLSFEELYRNAY MVLH
Sbjct: 7 NGGQQKMRIRPFM--ATIDEQYVTQTWELLKRAIQEIQRKNNSGLSFEELYRNAYTMVLH 64
Query: 63 KFGEKLYSGLVSTMTLHLKEIS-KSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GE+LY+GL + H+ + + IE+ GSFLE + W DH A+ MIRDILMYMD
Sbjct: 65 KHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMD 124
Query: 122 RTYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 180
R Y+ + H PV+ LGL+ +R I+R N I R+ + LLEL+ +R IN ++N
Sbjct: 125 RIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNA 184
Query: 181 IKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRLNEEM 236
ML+ LG +VY+++FE+P L+ ++++Y+ + ++ D YL + E +++E
Sbjct: 185 CDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEA 244
Query: 237 ERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRR 296
R + YLD +EAKI V++ M+A H+ +V+M N G+ ML K EDL R++ +F+R
Sbjct: 245 SRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKR 304
Query: 297 ------VPSG-LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISS 349
VP G L + + ++ +L ETG +V + + LK+PV FV LL KD + +++++
Sbjct: 305 IGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTT 364
Query: 350 AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMML 409
AF +D+ F+N FE F+N N +SPEF++L++DD LR GLK VS+ +++ LD VM+L
Sbjct: 365 AFADDRDFKNRFQHDFETFLNSNRQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDNVMIL 424
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMK 469
FRYLQEKDVFEKY+KQ+LAKRLL K+ SDD E++L+ KLKTECG QFT KLE MF D +
Sbjct: 425 FRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKE 484
Query: 470 ---TSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFR 523
T + ++ + P S + ++VLT G WPT V CN LP E+S E F
Sbjct: 485 LWLTLATSFRDWREAQPTKM-SIDISLRVLTAGVWPT---VQCNPVVLPQELSVAYEMFT 540
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATF 550
YY HTGR+L+ T +G+AD+KATF
Sbjct: 541 QYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 59 (25.8 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 555 KHE-LNVSTYQMCVLMLFNNADRLSYQ 580
+H+ L V+T+QM +L+ FN+ +R+S Q
Sbjct: 597 EHKILQVNTHQMIILLQFNHHNRISCQ 623
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 1159 (413.0 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 247/567 (43%), Positives = 358/567 (63%)
Query: 3 NQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLH 62
N ++ +I F +D +Y +TW++L+ AI EI N SGLSFEELYRNAY MVLH
Sbjct: 7 NGGQQKMRIRPFM--ATIDEQYVTQTWELLKRAIQEIQRKNNSGLSFEELYRNAYTMVLH 64
Query: 63 KFGEKLYSGLVSTMTLHLKEIS-KSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMD 121
K GE+LY+GL + H+ + + IE+ GSFLE + W DH A+ MIRDILMYMD
Sbjct: 65 KHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMD 124
Query: 122 RTYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 180
R Y+ + H PV+ LGL+ +R I+R N I R+ + LLEL+ +R IN ++N
Sbjct: 125 RIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNA 184
Query: 181 IKMLMDLG---PSVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRLNEEM 236
ML+ LG +VY+++FE+P L+ ++++Y+ + ++ D YL + E +++E
Sbjct: 185 CDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEA 244
Query: 237 ERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRR 296
R + YLD +EAKI V++ M+A H+ +V+M N G+ ML K EDL R++ +F+R
Sbjct: 245 SRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKR 304
Query: 297 ------VPSG-LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISS 349
VP G L + + ++ +L ETG +V + + LK+PV FV LL KD + +++++
Sbjct: 305 IGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTT 364
Query: 350 AFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMML 409
AF +D+ F+N FE F+N N +SPEF++L++DD LR GLK VS+ +++ LD VM+L
Sbjct: 365 AFADDRDFKNRFQHDFETFLNSNRQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDNVMIL 424
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMK 469
FRYLQEKDVFEKY+KQ+LAKRLL K+ SDD E++L+ KLKTECG QFT KLE MF D +
Sbjct: 425 FRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKE 484
Query: 470 ---TSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFR 523
T + ++ + P S + ++VLT G WPT V CN LP E+S E F
Sbjct: 485 LWLTLATSFRDWREAQPTKM-SIDISLRVLTAGVWPT---VQCNPVVLPQELSVAYEMFT 540
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATF 550
YY HTGR+L+ T +G+AD+KATF
Sbjct: 541 QYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 59 (25.8 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 555 KHE-LNVSTYQMCVLMLFNNADRLSYQ 580
+H+ L V+T+QM +L+ FN+ +R+S Q
Sbjct: 597 EHKILQVNTHQMIILLQFNHHNRISCQ 623
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 224/576 (38%), Positives = 351/576 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ HK LY
Sbjct: 256 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISANLYK 315
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 316 QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 375
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+QT+ ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 376 SMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 435
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FL+ + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 436 --QIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 493
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV G+ + +
Sbjct: 494 QKSLIASVEKQLLGEHLTAILQ---KGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 550
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II + F ++ F NA+ +FE
Sbjct: 551 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFET 607
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 608 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 667
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 668 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN 727
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 728 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 787
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 788 VLKAEFKEGKK-ELQVSLFQTMVLLMFNEGEEFSLE 822
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 233/603 (38%), Positives = 359/603 (59%)
Query: 2 SNQKK---RNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYN 58
SN K + I+ FK + + Y +TW+ L+ A+ I N + + EELY+ N
Sbjct: 158 SNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTSIKYNLEELYQAVEN 217
Query: 59 MVLHKFGEKLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDI 116
+ HK KLY L H+K +I + E A FL+++++ W DH + + MIR I
Sbjct: 218 LCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQDHCRQMIMIRSI 277
Query: 117 LMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRG 175
+++DRTY+ P + ++GL L+R I+ K+Q++ ++ +L L+ RER+GE ++R
Sbjct: 278 FLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIERERSGEAVDRS 337
Query: 176 LMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEE 235
L+R+++ ML DL +YQ+ FE+ FLE + Y E Q+ ++ + EYL +RL EE
Sbjct: 338 LLRSLLSMLSDL--QIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEE 395
Query: 236 MERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFR 295
+RV YLD ++ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF
Sbjct: 396 ADRVITYLDQSTQKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFS 452
Query: 296 RVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDK 355
RV G+ + + +++ G +V +PE KD VQ LLD KDK D+II F ++
Sbjct: 453 RVRGGVQVLLQHWIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDVCFMKNE 509
Query: 356 TFQNALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
F N + +FE FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++
Sbjct: 510 KFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIY 569
Query: 415 E-KDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQD 473
E KDVFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D
Sbjct: 570 EGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKD 629
Query: 474 TMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHT 531
M +F + + + L V +LT G WPT + +LPAEM L E F+++YLG H+
Sbjct: 630 IMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHS 689
Query: 532 GRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNR--AGNRDS 589
GR+L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S + + G DS
Sbjct: 690 GRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDS 748
Query: 590 CFR 592
R
Sbjct: 749 ELR 751
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 224/576 (38%), Positives = 349/576 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 251 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 310
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 311 QLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 370
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 371 SMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 430
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 431 --QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 488
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV G+ + +
Sbjct: 489 QKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 545
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 546 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFET 602
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 603 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 662
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 663 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN 722
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 723 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 782
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 783 VLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 817
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 224/576 (38%), Positives = 349/576 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 186 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 245
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 246 QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 305
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 306 SMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 365
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 366 --QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 423
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV G+ + +
Sbjct: 424 QKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 480
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 481 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFET 537
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 538 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 597
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 598 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN 657
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 658 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 717
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 718 VLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 752
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 224/576 (38%), Positives = 349/576 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 199 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 258
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 259 QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 318
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 319 SMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 378
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 379 --QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 436
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV G+ + +
Sbjct: 437 QKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 493
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 494 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFET 550
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 551 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 610
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 611 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN 670
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 671 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 730
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 731 VLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 765
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 223/576 (38%), Positives = 349/576 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 268 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 327
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL+++++ W +H + + MIR I +++DRTY+
Sbjct: 328 QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQNHCRQMIMIRSIFLFLDRTYVLQN 387
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 388 SMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 447
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 448 --QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 505
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV G+ + +
Sbjct: 506 QKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 562
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 563 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFET 619
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 620 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 679
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 680 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN 739
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 740 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 799
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 800 VLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 834
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 230/576 (39%), Positives = 341/576 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK R + Y E TW L A+ I N + + EELY+ N+ +K LY
Sbjct: 30 IKNFKDRPKLTDSYTEDTWLKLRDAVSAIQNSTSIQYNLEELYQAVENLCSYKVSPMLYK 89
Query: 71 GLVSTMTLHLK-EISKSIEAAQGG-SFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H++ +I + E + SFL+ +NR W DH + MIR I +++DRTY+
Sbjct: 90 QLRQVCEEHVQAQIHQFREESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQN 149
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + + GL L+R +IV +Q+R + +LE V RER+GE ++R L+R+++ ML DL
Sbjct: 150 SLLPSIWDTGLELFRTHIVSDAAVQSRTVQGILEQVERERSGETVDRSLLRSLLGMLSDL 209
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
VY++ FE+ FL + Y E Q+ ++ D EYL RRL EE +RV YLD +
Sbjct: 210 --QVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQST 267
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ HM ++ GL +L +++ +L +Y LF +V GL + +
Sbjct: 268 QKPLIATVEKQLLGEHMTTILQ---KGLRTLLDENRVCELTLLYELFSKVKGGLTALLQS 324
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G + V PER + E VQ LLD KD+ D++ S F +++F NA+ +FE
Sbjct: 325 WREYIKSVGAETVCSPERDR---EMVQELLDFKDQMDSVTQSCFQRNESFINAMKEAFEN 381
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K +EE++E ILDK+M++FR++ KDVFE +YK+
Sbjct: 382 FINQRPNKPAELIAKYVDSKLRAGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKD 441
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 442 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQT 501
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
+ L V +LT G WP+ + +LPAEM L E F+ +YLG H+GR+L WQ +G A
Sbjct: 502 EPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHA 561
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+K F +G+K EL VS +Q VL++FN +D S +
Sbjct: 562 VLKTEFKEGKK-ELQVSLFQTLVLLMFNESDECSVE 596
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 232/584 (39%), Positives = 351/584 (60%)
Query: 4 QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHK 63
Q + F I+ K + + + E TW+ L+ AI I+ E LY+ N+ LHK
Sbjct: 71 QPTKKFVIKLNKAKPTLPTNFEENTWEKLQSAIRAIFLKKKISFDLESLYQAVDNLCLHK 130
Query: 64 FGEKLYSGLVSTMTLHLKEISKSIEAAQGGS--FLEELNRKWNDHNKALQMIRDILMYMD 121
KLY + H+ +S+ FL + + W D + MIR I + +D
Sbjct: 131 LDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQDFCDQMLMIRSIALTLD 190
Query: 122 RTY-IPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI 180
R Y I + + + E+GL L+R ++ + +++ R + LL ++ +ER E +NR L+ ++
Sbjct: 191 RKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHL 250
Query: 181 IKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT 240
+KM LG +Y E FEKPFLE ++EFY E K+++ D EYLK E RL+EE ER
Sbjct: 251 LKMFTALG--IYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCI 308
Query: 241 HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG 300
Y+DA + + VE++++ H+ LV ++ G ++ + EDL RM LF RV +
Sbjct: 309 LYIDAVTRKPLITTVERQLLERHI--LVVLEK-GFTTLMDGRRTEDLQRMQTLFSRV-NA 364
Query: 301 LLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
L ++R+ ++S++R+TG+++V D E+ KD VQ LLD K D I +F +++F N
Sbjct: 365 LESLRQALSSYVRKTGQKIVMDEEKDKD---MVQSLLDFKASLDIIWEESFYKNESFGNT 421
Query: 361 LNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 419
+ SFE+ INL P E I+ F+D+KLR G KG SEE++E++L+KV++LFR++Q KDVF
Sbjct: 422 IKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESVLEKVLVLFRFIQGKDVF 481
Query: 420 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 479
E +YK+ LAKRLL GK+ S DAE+S+I KLKTECG QFT+KLEGMF D++ S++ F
Sbjct: 482 EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFK 541
Query: 480 AS---HPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLS 536
S +L + V VLTTG WPT P + LP E++ + F+ +YL ++GRRL
Sbjct: 542 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLM 601
Query: 537 WQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
WQ ++G +KA F KG+K EL VS +Q VLMLFN+A +LS++
Sbjct: 602 WQNSLGHCVLKADFSKGKK-ELAVSLFQAVVLMLFNDAMKLSFE 644
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 222/577 (38%), Positives = 348/577 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 169 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 228
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL+++++ W DH + + MIR I +++DRTY+
Sbjct: 229 QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQN 288
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 289 SMLPSIWDMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 348
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE FLE + Y E Q+ ++ + EYL +RL EE +R+ YLD +
Sbjct: 349 --QIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQST 406
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV G+ + +
Sbjct: 407 QKPLIATVEKQLLGEHLTAILQ---KGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQH 463
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 464 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFET 520
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 521 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 580
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF---YASHP 483
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 581 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQQYMQNQ 640
Query: 484 ELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGS 543
+ + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQ+ +G
Sbjct: 641 NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGH 700
Query: 544 ADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 701 CVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 736
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 223/578 (38%), Positives = 347/578 (60%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ F+ R + Y + TW L A+ I + + + EELY+ N+ +K LY
Sbjct: 25 IKNFRERPKLPDNYTQDTWHKLHEAVAAIQSSTSIKYNLEELYQAVENLCSYKVSATLYK 84
Query: 71 GLVSTMTLHLK-EISK---SIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIP 126
L H+K +I + ++ FL+++N+ W DH + + MIR I +++DRTY+
Sbjct: 85 QLRQVCEDHVKAQILQFRCCTDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVL 144
Query: 127 STHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLM 185
P + ++GL L+R++++ ++Q + ++ +L L+ RER+GE ++R L+R+++ ML
Sbjct: 145 QNSMLPSIWDMGLELFRNHVISDKQVQNKTIDGILLLIERERSGEAVDRSLLRSLLSMLS 204
Query: 186 DLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
DL VY+E FE+ FLE + Y E Q+ ++ + EYL +RL EE +RV YLD
Sbjct: 205 DL--QVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDH 262
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ + VEK+++ H+ ++ GL N+L +++ DL + Y LF RV G +
Sbjct: 263 STQKPLIACVEKQLLGEHLTAILQ---KGLDNLLDENRISDLTQTYQLFSRVKGGQQILL 319
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +++ G +V +PE+ KD VQ LLD KDK D+II F ++ F N + SF
Sbjct: 320 QHWSEYIKNFGTTIVVNPEKDKD---MVQELLDFKDKVDHIIEVCFQKNEKFINLMKESF 376
Query: 366 EYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYK 424
E FIN P P E I+ +VD KLR G K ++E++E ILDK+M++FR++ KDVFE +YK
Sbjct: 377 ETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYK 436
Query: 425 QHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASH 482
+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 437 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQN 496
Query: 483 PELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMG 542
+ L V +LT G WPT + +L +EM L E F+++YLG H+GR+L WQT +G
Sbjct: 497 QSDPGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLG 556
Query: 543 SADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
A +KA F +G+K E VS +Q VL++FN D S++
Sbjct: 557 HAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDEFSFE 593
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 225/576 (39%), Positives = 345/576 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ F+ R + Y + TW+ L A+ I + + + EELY+ N+ HK LY
Sbjct: 47 IKNFRDRPRLPDNYTQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYK 106
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H++ +I + E + FL+++N W DH + + MIR I +++DRTY+
Sbjct: 107 QLRQVCEDHVQAQILQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQN 166
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R++I+ +Q++ ++ +L L+ RER GE ++R L+R+++ ML DL
Sbjct: 167 SMLPSIWDMGLELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLLRSLLSMLSDL 226
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +RV YLD +
Sbjct: 227 --QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 284
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++H GL ++L +++ DL +MY LF RV G + +
Sbjct: 285 QKPLIACVEKQLLGEHLTAILH---KGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQH 341
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+ +++ G +V +PE+ KD VQ LLD KD+ D++I F ++ F N + SFE
Sbjct: 342 WSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFET 398
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ VD KLR G K ++E++E ILDKVM++FR++ KDVFE +YK+
Sbjct: 399 FINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKD 458
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M +F Y +
Sbjct: 459 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQYMQNQS 518
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
S L V +LT G WPT + +L EM L E F+++YLG H+GR+L WQT +G A
Sbjct: 519 DPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHA 578
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K E VS +Q VL++FN D S++
Sbjct: 579 VLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 613
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 224/580 (38%), Positives = 344/580 (59%)
Query: 7 RNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGE 66
R I+ F+ R + Y + TW+ L A+ I + + + EELY+ N+ HK
Sbjct: 41 RKLVIKNFRDRPRLPDNYTQDTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSP 100
Query: 67 KLYSGLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
LY L H++ +I E + FL+++N W DH + + MIR I +++DRTY
Sbjct: 101 TLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTY 160
Query: 125 IPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKM 183
+ P + ++GL L+R++I+ +Q++ ++ +L L+ RER+GE ++R L+R+++ M
Sbjct: 161 VLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSM 220
Query: 184 LMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYL 243
L DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +RV YL
Sbjct: 221 LSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYL 278
Query: 244 DAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLT 303
D ++ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV G
Sbjct: 279 DHSTQKPLIACVEKQLLGEHLTAILQ---KGLEHLLDENRVPDLTQMYQLFSRVKGGQHA 335
Query: 304 IREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+ + + +++ G +V +PE+ KD VQ LLD KDK D+++ F ++ F N +
Sbjct: 336 LLQHWSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDKVDHVVEVCFQRNERFINLMKE 392
Query: 364 SFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKY 422
SFE FIN P P E I+ VD KLR G K ++E++E ILDK+M+LFR++ KDVFE +
Sbjct: 393 SFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAF 452
Query: 423 YKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YA 480
YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M F +
Sbjct: 453 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHM 512
Query: 481 SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN 540
+ L V +LT G WPT + +LP EM L E F+++YLG H+GR+L WQT
Sbjct: 513 QNQSAPGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTT 572
Query: 541 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+G A +KA F +G+K E VS +Q VL++FN D S++
Sbjct: 573 LGHAVLKADFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 611
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 975 (348.3 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 194/354 (54%), Positives = 257/354 (72%)
Query: 210 VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVH 269
+ESQKF+ Y+KK E R+NEE+ERV H LD +E I VVE+E+I+ HM +V
Sbjct: 1 MESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVE 60
Query: 270 MDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDP 329
M+NSGLV+ML + K EDL MY LF RVP+GL T+ E M+S+LRE GK LV++ K+P
Sbjct: 61 MENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNP 120
Query: 330 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 389
V+++Q LLD K ++D + +FNND+ F+ + FEYF+NLN RSPE++SLF+DDKL+K
Sbjct: 121 VDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKK 180
Query: 390 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 449
G+KG++E++VETILDK M+LFR++QEKDVFE+YYKQHLA+RLL+ K+VSDD+E+++I KL
Sbjct: 181 GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKL 240
Query: 450 KTECGYQFTSKLEGMFTDMKTSQDTMHEF----YASHPELGDSRTLVVQVLTTGSWPTQP 505
KTECG QFTSKLEGMF DM S TM EF A+ LG L V+VLTTG WPTQ
Sbjct: 241 KTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGV-DLTVRVLTTGYWPTQS 299
Query: 506 SVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF-GKGQKHE 557
+ CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G +K +
Sbjct: 300 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKED 353
Score = 87 (35.7 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 539 TNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+ +G + T +KH L VST+QM +LMLFNN ++ +++
Sbjct: 355 SEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFE 396
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 228/593 (38%), Positives = 346/593 (58%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
+ A R + Y + TW+ L A+ I + + + EELY+ N+ HK LY
Sbjct: 3 LSALTDRPKLPDNYTQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYQ 62
Query: 71 GLVSTMTLHLK-EISK----SIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 125
L H++ +I + ++ FL+++N W DH + + MIR I +++DRTY+
Sbjct: 63 QLRQACEGHVQAQILQFRQPCTDSLDSVLFLKKMNTCWQDHCRQMIMIRSIFLFLDRTYV 122
Query: 126 PSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKML 184
P + ++GL L+R++I+ +QT+ ++ +L L+ RER+GE ++R L+R+++ ML
Sbjct: 123 LQNSTLPSIWDMGLELFRNHIISDKMVQTKTIDGILLLIERERSGEAVDRSLLRSLLGML 182
Query: 185 MDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLD 244
DL VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +RV YLD
Sbjct: 183 SDL--QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYLD 240
Query: 245 AKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTI 304
++ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV G +
Sbjct: 241 HSTQKPLIACVEKQLLGEHLTAILQ---KGLDHLLDENRVPDLTQMYQLFSRVRGGQQAL 297
Query: 305 REVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ + +++ G +V +PE+ KD VQ LLD KD+ D++I F + F N + S
Sbjct: 298 LQHWSDYIKTFGTTIVINPEKDKD---MVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKES 354
Query: 365 FEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYY 423
FE FIN P P E I+ VD KLR G K ++E++E +LDKVM+LFR++ KDVFE +Y
Sbjct: 355 FETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERMLDKVMILFRFIHGKDVFEAFY 414
Query: 424 KQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YAS 481
K+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M F Y
Sbjct: 415 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQ 474
Query: 482 HPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNM 541
+ S L V +LT G WPT + +L EM L E F+++YLG H+GR+L WQT +
Sbjct: 475 NQSDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTL 534
Query: 542 GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNR--AGNRDSCFR 592
G A +KA F +G+K E VS +Q VL++FN D S++ R G DS R
Sbjct: 535 GHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSELR 586
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 223/576 (38%), Positives = 340/576 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ F+ R + Y + TW+ L A+ + + + + EELY+ N+ HK LY
Sbjct: 45 IKNFRDRPRLPDNYTQDTWRKLHEAVRAVQSSTSIRYNLEELYQAVENLCSHKVSPMLYK 104
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H++ +I E + FL+++N W DH + + MIR I +++DRTY+
Sbjct: 105 QLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQN 164
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ +Q++ ++ +L L+ RER+GE ++R L+R+++ ML DL
Sbjct: 165 STLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDL 224
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +RV YLD +
Sbjct: 225 --QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 282
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV G + +
Sbjct: 283 QKPLIACVEKQLLGEHLTAILQ---KGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQH 339
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+ +++ G +V +PE+ KD VQ LLD KDK D++I F ++ F N + SFE
Sbjct: 340 WSEYIKTFGTAIVINPEKDKD---MVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFET 396
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ VD KLR G K ++E++E LDK+M+LFR++ KDVFE +YK+
Sbjct: 397 FINKRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKD 456
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELG 486
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M F
Sbjct: 457 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQS 516
Query: 487 DSRT--LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
DS L V +LT G WPT + +L EM L E F+++YLG H+GR+L WQT +G A
Sbjct: 517 DSGPIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHA 576
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+KA F +G+K E VS +Q VL++FN D S++
Sbjct: 577 VLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFE 611
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 225/590 (38%), Positives = 344/590 (58%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ F+ R + Y + TW L A+ I + + + EELY+ N+ HK LY
Sbjct: 47 IKNFRDRPKLPDNYTQDTWHKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVAPTLYQ 106
Query: 71 GLVSTMTLHLKE--ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H++ + ++ FL+++N W DH + + M+R I +++DRTY+
Sbjct: 107 QLREACESHVQAQILQVCTDSLDSVFFLKKINTCWQDHCRQMIMVRSIFLFLDRTYVLQN 166
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +++ +QT+ ++ +L L+ RER+GE ++R L+R ++ ML DL
Sbjct: 167 SLLPSIWDMGLELFRSHVISDRMVQTKTIDGILLLIARERSGEAVDRSLLRGLLGMLSDL 226
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
VY++ FE FLE + Y E Q+ ++ + EYL +RL EE +RV YLD +
Sbjct: 227 --QVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 284
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL ++L +++ DL +MY LF RV G + +
Sbjct: 285 QKPLIACVEKQLLGEHLTAILQ---KGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQH 341
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+ +++ G +V +PE+ KD VQ LLD KD+ D++I F ++ F N + SFE
Sbjct: 342 WSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEA 398
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ VD KLR G K ++E++E ILDKVM++FR++ KDVFE +YK+
Sbjct: 399 FINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKD 458
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE 484
LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D M F Y +
Sbjct: 459 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQS 518
Query: 485 LGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSA 544
S L V +LT G WPT + +L EM L E F+++YLG H+GR+L WQT +G A
Sbjct: 519 DPGSIDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRKLQWQTALGHA 578
Query: 545 DIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQGNRA--GNRDSCFR 592
+KA F +G+K E VS +Q VL++FN D ++ +A G DS R
Sbjct: 579 VLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELR 627
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 224/584 (38%), Positives = 346/584 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y++ T+ LE A+ I S EELY+ NM HK +LY+
Sbjct: 104 IKNFKDKPTLPDNYSKDTYVKLEEAVIAIQLSKPIKYSLEELYQAVVNMCSHKMDAQLYA 163
Query: 71 GLVSTMTLHLKEISKSIEAAQGGSF-----LEELNRKWNDHNKALQMIRDILMYMDRTYI 125
L H+K K ++ GGS LE++N W + + MIR I +YMDRTY+
Sbjct: 164 KLKELTEQHVKRNIK-LKELTGGSMDKLILLEKINHWWLSFCQQMIMIRSIFLYMDRTYV 222
Query: 126 PSTHKTPVH---ELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIK 182
+ VH ++GL+L+R + +++ +Q R ++ LL L+ +ER G ++RGL++++++
Sbjct: 223 --LQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGSTVDRGLLKSLVR 280
Query: 183 MLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHY 242
ML DL +Y FE+ FL+ + + YK ESQ+ ++ + EYL+ +RL EE ER+ HY
Sbjct: 281 MLCDL--QIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHY 338
Query: 243 LDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLL 302
LD+ ++ + VEKE++A H+ ++ GL ++L D++ DL +Y L RV +G
Sbjct: 339 LDSSTKHPLIYNVEKELLAEHLTSILQ---KGLDSLLEDNRLSDLTLLYGLLSRVKNGTS 395
Query: 303 TIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALN 362
+ +++ G+ +V DPE+ K VQ LLD KDK D I+ + F +++ F N+L
Sbjct: 396 ELCGNFNGFIKKKGRTIVIDPEKDKS---MVQDLLDFKDKMDVIVRTCFEHNEKFTNSLR 452
Query: 363 SSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEK 421
+FE+FIN P E I+ +VD KLR G KG ++E++E LDK+M+LFR++ KDVFE
Sbjct: 453 EAFEFFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRFIHGKDVFEA 512
Query: 422 YYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYAS 481
+YK+ LAKRLL GK+ S D+E+S++ KLK ECG FTSKLEGMF DM+ S+D ++ +
Sbjct: 513 FYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRD-INIAFRG 571
Query: 482 HPELGDSRT-----LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLS 536
H L ++R L V +LT G WPT +P + + F +YL H+GR+L
Sbjct: 572 HA-LSNNRDVHNLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSGRKLQ 630
Query: 537 WQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
WQ +G+ ++A F G K EL VS +Q VL+LFN+ LSY+
Sbjct: 631 WQPTLGNCMLRAQFDAGPK-ELLVSLFQALVLLLFNDKPVLSYE 673
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 772 (276.8 bits), Expect = 3.7e-97, Sum P(2) = 3.7e-97
Identities = 163/446 (36%), Positives = 266/446 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 68 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 127
Query: 71 GLVSTMTLHLKEISKSIEAAQGGS--FLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K + + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 128 QLRQICEDHIKAQIHQFKTGFKDTVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 187
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+QT+ ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 188 SMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSLLNMLSDL 247
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FL+ + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 248 --QIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 305
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL ++L +++ +DL +Y LF RV G+ + +
Sbjct: 306 QKSLIASVEKQLLGEHLTAILQ---KGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQH 362
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II + F ++ F NA+ +FE
Sbjct: 363 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFET 419
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 420 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 479
Query: 427 LAKRLLSGKTVSDDAERSLIVKLKTE 452
LAKRLL GK+ S DAE+S++ KLK E
Sbjct: 480 LAKRLLVGKSASVDAEKSMLSKLKHE 505
Score = 213 (80.0 bits), Expect = 3.7e-97, Sum P(2) = 3.7e-97
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 476 HEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRL 535
HE Y + + + L V +LT G WPT + +LP EM L E F+++YLG H+GR+L
Sbjct: 504 HE-YMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 562
Query: 536 SWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
WQ+ +G +KA F +G+K EL VS +Q VL++FN + S +
Sbjct: 563 QWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLE 606
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 207/577 (35%), Positives = 329/577 (57%)
Query: 6 KRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKF- 64
K+ I+ K Y + +W L AI I A+ L+ EELY+ N+ K
Sbjct: 48 KKILVIKNLKQIPKTPDNYEDSSWNKLSSAITSINMKQATTLTQEELYKMVENLCFDKIL 107
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGS---FLEELNRKWNDHNKALQMIRDILMYMD 121
LY+ + + H+ K + FL+ +N W DH + MIR I +Y+D
Sbjct: 108 ASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLD 167
Query: 122 RTYIPSTHKT--PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 179
RTY+ T + +LGL + +N+ + + ++ + +++LL + ER G+ I+R L+ +
Sbjct: 168 RTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHS 227
Query: 180 IIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 239
++KML L ++Y + FE F++ + FY +E I + YLK RLN+E ER+
Sbjct: 228 LVKMLSSL--NIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERL 284
Query: 240 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 299
YL+ ++ ++ V+++++I H+ ++ + +VN D+ EDLG++Y L V
Sbjct: 285 MRYLEQSTKKQLMAVLDRQLIERHVDVILEKGFNAMVN---GDRLEDLGKLYQLLNSVGE 341
Query: 300 GLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQN 359
+ I+E S++++TG Q++ D E+ +Q LLD KD+ D I+S +F+ ++
Sbjct: 342 -IKKIKESWQSYIKQTGIQMLNDKEK---EATLIQDLLDYKDRLDRILSQSFSKNELLTY 397
Query: 360 ALNSSFEYFINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
AL SFEYFIN P E ++ F+D KL+ G K +SEE++ET+L+K ++LFRY+Q KDV
Sbjct: 398 ALKESFEYFINTKQNKPAELVARFIDSKLKVGGKRMSEEELETVLNKSLILFRYIQGKDV 457
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
FE +YKQ L+KRLL K+ S DAE+S+I KLKTECG FT+KLE MF D++ S D M+ F
Sbjct: 458 FEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSF 517
Query: 479 YASHPELGDSRTLV--VQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLS 536
S P + +++ + VLT+G+WP QP + LP E E F +YL H G+ L
Sbjct: 518 RDS-PMTQNFKSIEMNIYVLTSGNWPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLK 576
Query: 537 WQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNN 573
WQ + +KA F +G+K EL+VS +Q +L LFN+
Sbjct: 577 WQNALSYCVLKANFIQGKK-ELSVSLFQTIILYLFND 612
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 486 (176.1 bits), Expect = 4.2e-86, Sum P(3) = 4.2e-86
Identities = 100/234 (42%), Positives = 148/234 (63%)
Query: 330 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 389
+++V +L K K+D I AF +D+ Q+A+ +SF F+N PRS EF+SLF D+ L+K
Sbjct: 398 IKWVDDILALKKKFDGIWKDAFGSDQVLQSAITASFSSFLNSTPRSSEFLSLFFDENLKK 457
Query: 390 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 449
G+KG ++ +V+ +L+ + L RY+++KD FE YYK+HL++RLL +++S DAER +I K+
Sbjct: 458 GVKGKTDNEVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKM 517
Query: 450 KTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGD---SR-TLVVQVLTTGSWPT-- 503
K E G QFT +LE MF DM S+D + E GD R L + VLT+ WP
Sbjct: 518 KMEVGNQFTQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEI 577
Query: 504 -------QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF 550
Q + C +P E+ + + F +YL H+GR+LSWQ +MG+ADIKATF
Sbjct: 578 MSSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATF 631
Score = 317 (116.6 bits), Expect = 4.2e-86, Sum P(3) = 4.2e-86
Identities = 75/254 (29%), Positives = 135/254 (53%)
Query: 82 EISKSIEAAQGGS-FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNL 140
+ +++ E + G FL L+ W DH ++MI D+LMYMDR + + K ++ + L
Sbjct: 106 QFTEATERRETGERFLSALSEVWEDHQICMKMITDVLMYMDR--VVALRKVSIYAAAMAL 163
Query: 141 WRDNIVRS------NKIQTRLL-NTLLELVHRERTGEVINRGLMRNIIKMLMDL------ 187
+RD+++RS N + +L +T+L ++ ER+G +I+R L+ + IKML L
Sbjct: 164 FRDHVLRSPVSSSNNAVVADVLKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYETEAE 223
Query: 188 --GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
+Y FE +LE SA FY+ E ++ +E D + R+ EE ER + +
Sbjct: 224 EESSKLYLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISL 283
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
SE+KI +V+ E+I N++ +V+ + +G+ ML D+ ++L ++Y L RV +
Sbjct: 284 LSESKIKEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLT 343
Query: 306 EVMTSHLRETGKQL 319
+ + E G ++
Sbjct: 344 AAVQKRIVEMGNEI 357
Score = 212 (79.7 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49
Identities = 48/113 (42%), Positives = 69/113 (61%)
Query: 491 LVVQVLTTGSWPT---------QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNM 541
L + VLT+ WP Q + C +P E+ + + F +YL H+GR+LSWQ +M
Sbjct: 563 LDINVLTSTMWPMEIMSSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSM 622
Query: 542 GSADIKATF----GKGQKHELNVSTYQMCVLMLFNN---ADRLSYQGNRAGNR 587
G+ADIKATF GK Q+HELNVSTY M +L+LFN+ + L+++ +A R
Sbjct: 623 GTADIKATFHRSNGKVQRHELNVSTYAMFILLLFNDIPIGESLTFEEIQARTR 675
Score = 110 (43.8 bits), Expect = 4.2e-86, Sum P(3) = 4.2e-86
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 10 QIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLY 69
+I A + + V EK WK L ++ +I+ +AS LSFE+LYRNAY++V + E LY
Sbjct: 8 KIRAPRKGIPVSGDEFEKNWKDLSTSLKKIHTKDASELSFEQLYRNAYSIVKIQRAEDLY 67
Score = 54 (24.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 56/257 (21%), Positives = 106/257 (41%)
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
G V ++FEK + ++S K+ ++ E E L + + +++R +
Sbjct: 15 GIPVSGDEFEKNWKDLSTSLKKIHTKDASELSF--EQLYRNAYSI-VKIQRAEDLYERTK 71
Query: 248 EAK---ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTI 304
E + + V+K ++A PRL+ + V+M D++ + R S L
Sbjct: 72 ELEKEWLCGEVQKRVVAAITPRLLLAKEA--VDM--QDQFTEATERRETGERFLSAL--- 124
Query: 305 REVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKY----DNIISS--AFNNDKTFQ 358
EV H + +++TD D V ++++ D+++ S + +N+
Sbjct: 125 SEVWEDH--QICMKMITDVLMYMDRVVALRKVSIYAAAMALFRDHVLRSPVSSSNNAVVA 182
Query: 359 NALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMML-FR--YLQE 415
+ L S+ + I L RS I + K L+G+ E + E K+ + F YL+
Sbjct: 183 DVLKSTVLFMIQLE-RSGHMIDRALIHSCIKMLEGLYETEAEEESSKLYLTSFEPDYLEA 241
Query: 416 KDVFEKYYKQHLAKRLL 432
F Y+ KRLL
Sbjct: 242 SAAF---YRAE-GKRLL 254
Score = 43 (20.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 392 KGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSG----KTVSDDAERSLIV 447
K SE E + + + + +D++E+ + L K L G + V+ R L+
Sbjct: 40 KDASELSFEQLYRNAYSIVKIQRAEDLYER--TKELEKEWLCGEVQKRVVAAITPRLLLA 97
Query: 448 KLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLT 497
K + QFT E ++T F ++ E+ + + ++++T
Sbjct: 98 KEAVDMQDQFTEATE--------RRETGERFLSALSEVWEDHQICMKMIT 139
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 667 (239.9 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 148/404 (36%), Positives = 232/404 (57%)
Query: 190 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 249
++Y F FL + FY++ES I EYLKKAE+R EE ER +YL K +
Sbjct: 222 TLYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIAS 281
Query: 250 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 309
+ +VVE E+++ H+ L+ ++G +M+ +E L +Y F RV G+ ++++ +
Sbjct: 282 PLLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLA 341
Query: 310 SHLRETGKQL-VTDPERLKDPVE-------------FVQRLLDEKDKYDNIISSAFNNDK 355
++ GK + T + L+ + +VQ++L D+ + IIS+ + D+
Sbjct: 342 KYVAHHGKLINETTSQALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADR 401
Query: 356 TFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQE 415
+ N+L+ +F F++ R+PE+ISLF+DD L+K + E +E L + LFR++ E
Sbjct: 402 SILNSLSDAFVTFVDGYTRAPEYISLFIDDNLKKDARKAIEGSIEATLQNSVTLFRFISE 461
Query: 416 KDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTM 475
KDVFEKYYK HLAKRLL+ +++S DAE +I +LK E G FT KLEGMF DM SQ+ +
Sbjct: 462 KDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQELL 521
Query: 476 HEFYASHPELGDSRT---LVVQVLTTGSWPTQPS---VTCNLPAEMSALCEKFRSYYLGT 529
E Y + L ++ L V +L + WP S + CN P + A ++F +YL
Sbjct: 522 QE-YKHNSALQSAKPALDLNVSILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSK 580
Query: 530 HTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNN 573
HTGR+L W +MGSAD++ F K +K++LNVST +L+LF +
Sbjct: 581 HTGRKLLWYPSMGSADVRVNF-KDRKYDLNVSTIASVILLLFQD 623
Score = 363 (132.8 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
Identities = 96/307 (31%), Positives = 158/307 (51%)
Query: 18 VVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMT 77
++V KY EK + H + ++ + +Y+N Y+ L G L +
Sbjct: 55 ILVLHKYGEKLYN---H-VQDVIRSRLKEETVPAIYKN-YDASL--LGNALLD--IRKND 105
Query: 78 LHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELG 137
+ S+S+EAA FL L W DH ++QMI +L Y+D+ Y S K PV+E G
Sbjct: 106 SYSTSWSRSLEAAH--RFLSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKVPVNENG 163
Query: 138 LNLWRDNIV-RSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS------ 190
+ ++R+ ++ S +I + + T+L LV+ ER G INR L+ + + ML L PS
Sbjct: 164 IYIFREVVLLNSFEIGEKCVETILILVYLERKGNTINRPLINDCLDMLNSL-PSENKKET 222
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 250
+Y F FL + FY++ES I EYLKKAE+R EE ER +YL K +
Sbjct: 223 LYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASP 282
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 310
+ +VVE E+++ H+ L+ ++G +M+ +E L +Y F RV G+ ++++ +
Sbjct: 283 LLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAK 342
Query: 311 HLRETGK 317
++ GK
Sbjct: 343 YVAHHGK 349
Score = 160 (61.4 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 38/82 (46%), Positives = 55/82 (67%)
Query: 29 WKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKE-----I 83
W++L+ AI +I+ + S LSFEELYRNAY +VLHK+GEKLY+ + + LKE I
Sbjct: 26 WEVLQRAIGDIFQKSTSQLSFEELYRNAYILVLHKYGEKLYNHVQDVIRSRLKEETVPAI 85
Query: 84 SKSIEAAQGGSFLEELNRKWND 105
K+ +A+ G+ L ++ RK ND
Sbjct: 86 YKNYDASLLGNALLDI-RK-ND 105
Score = 40 (19.1 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 398 DVETILDKVMMLFRYLQEKD--VFEK 421
+V TI +++LF+ L+E +FE+
Sbjct: 609 NVSTIASVILLLFQDLKENQCLIFEE 634
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 165/444 (37%), Positives = 266/444 (59%)
Query: 11 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
I+ FK + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY
Sbjct: 252 IKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK 311
Query: 71 GLVSTMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPST 128
L H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 312 QLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN 371
Query: 129 HKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 372 SMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL 431
Query: 188 GPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKS 247
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+ YLD +
Sbjct: 432 --QIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 489
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREV 307
+ + VEK+++ H+ ++ GL N+L +++ +DL +Y LF RV G+ + +
Sbjct: 490 QKSLIATVEKQLLGEHLTAILQ---KGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQ 546
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+++ G +V +PE KD VQ LLD KDK D+II F ++ F NA+ +FE
Sbjct: 547 WIEYIKAFGSTIVINPE--KDKT-MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFET 603
Query: 368 FINLNPRSP-EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQH 426
FIN P P E I+ +VD KLR G K ++E++E +LDK+M++FR++ KDVFE +YK+
Sbjct: 604 FINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKD 663
Query: 427 LAKRLLSGKTVSDDAERSLIVKLK 450
LAKRLL GK+ S DAE+S++ KLK
Sbjct: 664 LAKRLLVGKSASVDAEKSMLSKLK 687
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 661 (237.7 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 157/471 (33%), Positives = 260/471 (55%)
Query: 141 WRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG-----PS----- 190
W+++ K+ +++ +L+LV ++R GE I + +++I+ + LG P+
Sbjct: 155 WKEDFFL--KVHEKVMGAVLKLVEKQRNGETIEQSRIKSIVDSFVSLGLDETDPTKSTLE 212
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 250
+Y+ F++PFLE + +Y+ ES++F+ EY+KKAE RL EE RV YL+
Sbjct: 213 IYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKD 272
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLD-DKYEDLGRMYNLFRRVPSGLLTIREVMT 309
+T+ ++ H L D LLD ++ +DL RMY L R+ GL +R
Sbjct: 273 LTSTCLDVLVTAHSELL--RDE---FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTKFE 327
Query: 310 SHLRETGKQLVTDPERLKDPVE---FVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFE 366
+H+R G V D E +V LL +Y +++ AFN + F +L+++
Sbjct: 328 AHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNACR 387
Query: 367 YFINLNP-------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVF 419
F+N N ++PE ++ + D L++G K E ++E +L ++M +F+Y+++KDVF
Sbjct: 388 EFVNRNKICKSGSTKTPELLAKYTDSLLKRGSKAAEESELEEMLVQIMTVFKYIEDKDVF 447
Query: 420 EKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFY 479
+K+Y + LAKRL+ +VSDDAE S+I KLK CG+++T+KL+ MF D++ S+D ++ Y
Sbjct: 448 QKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKD-LNSSY 506
Query: 480 ASHPELG----DSRTLVV----QVLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTH 530
E D R +V Q+L TG WP T PS + P E+ E+F+ +Y H
Sbjct: 507 KDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSERFQKFYCDKH 566
Query: 531 TGRRLSWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSY 579
GR+L+W + ++KA + K K + VSTYQM +L+LFN +D L+Y
Sbjct: 567 NGRKLTWLWQLCKGELKANYIKNTKVPYTFLVSTYQMGILLLFNESDTLTY 617
Score = 321 (118.1 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 100/368 (27%), Positives = 174/368 (47%)
Query: 27 KTWKILEHAIHEIY-NHNA-SGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEIS 84
K + L A+H +H A SG + + R A H GE+LY L ++ HL+ +
Sbjct: 39 KNYMALYTAVHNFCTSHKAVSGQAIQA-QRGA-----HLLGEELYRKLGEYLSRHLEWVH 92
Query: 85 KSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIP---STHKTPVHEL---GL 138
+ L R+W + A + I + Y++R ++ K V+++ L
Sbjct: 93 GESMGHTDEALLSFYIREWQRYTTAAKYINHLFRYLNRHWVKREIDEGKKNVYDVYTQHL 152
Query: 139 NLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG-----PS--- 190
W+++ K+ +++ +L+LV ++R GE I + +++I+ + LG P+
Sbjct: 153 VKWKEDFFL--KVHEKVMGAVLKLVEKQRNGETIEQSRIKSIVDSFVSLGLDETDPTKST 210
Query: 191 --VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSE 248
+Y+ F++PFLE + +Y+ ES++F+ EY+KKAE RL EE RV YL+
Sbjct: 211 LEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDIS 270
Query: 249 AKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD-DKYEDLGRMYNLFRRVPSGLLTIREV 307
+T+ ++ H L D LLD ++ +DL RMY L R+ GL +R
Sbjct: 271 KDLTSTCLDVLVTAHSELL--RDE---FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTK 325
Query: 308 MTSHLRETGKQLVTDPERLKDPVE---FVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+H+R G V D E +V LL +Y +++ AFN + F +L+++
Sbjct: 326 FEAHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNA 385
Query: 365 FEYFINLN 372
F+N N
Sbjct: 386 CREFVNRN 393
Score = 56 (24.8 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 26 EKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISK 85
E+TW LE+ I+ + G+ + Y Y V H F T H +
Sbjct: 15 EETWVFLENGINNVMVKLEDGVDMKN-YMALYTAV-HNF-----------CTSHKAVSGQ 61
Query: 86 SIEAAQGGSFL-EELNRKWNDH 106
+I+A +G L EEL RK ++
Sbjct: 62 AIQAQRGAHLLGEELYRKLGEY 83
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 347 (127.2 bits), Expect = 2.2e-68, Sum P(4) = 2.2e-68
Identities = 74/193 (38%), Positives = 118/193 (61%)
Query: 330 VEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRK 389
+++V +LD + K+D I +F D Q + F FI+ RS EF+SL++D+ L++
Sbjct: 395 IKWVHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQFGRSSEFVSLYIDENLKR 454
Query: 390 GLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 449
G++G S+ +V ILD+ +++ RYL++KD+FE+YY++HL +RLL + S++AE+ LI +
Sbjct: 455 GIRGKSDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMM 514
Query: 450 KTECGYQFTSKLEGMFTDMKTSQDTMHEFYASH-PELGDSRT------LVVQVLTTGSWP 502
+ E G FTSK EGMF D+ S++ + Y H LGD L + VLT+ SWP
Sbjct: 515 QLELGKHFTSKFEGMFKDITISEELSTK-YGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Query: 503 TQPSVTCNLPAEM 515
P V PA++
Sbjct: 574 --PDVM-GRPAQV 583
Score = 225 (84.3 bits), Expect = 2.2e-68, Sum P(4) = 2.2e-68
Identities = 58/155 (37%), Positives = 86/155 (55%)
Query: 155 LLNT-LLELVHRERTGEVINRGLMRNIIKMLMDL--------GPSVYQEDFEKPFLEVSA 205
+L+T +L+ + ER G+VINR L+ + +KML DL +Y FE LE S
Sbjct: 181 ILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLLEASR 240
Query: 206 EFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMP 265
FY+ E+ K + D ++++ RRL EE +R L S K+T VE E+I+ H+
Sbjct: 241 TFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAVEAELISAHLN 300
Query: 266 RLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRV-PS 299
+ ++N+GL ML DD+ EDL +Y L RV PS
Sbjct: 301 DFLALENNGLRQMLDDDRVEDLAILYQLVARVDPS 335
Score = 170 (64.9 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 40/132 (30%), Positives = 76/132 (57%)
Query: 92 GGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKI 151
G +F++ L W +H ++ M+ DILMY+D+ ++ + T + + L+RD++V N +
Sbjct: 110 GDTFMKGLKEAWENHRMSMNMVADILMYLDKGFLKESRGTSIFVTTIGLFRDHLVNPNTV 169
Query: 152 --QTR------LLNT-LLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLE 202
R +L+T +L+ + ER G+VINR L+ + +KML DL + + D ++ +L
Sbjct: 170 VGHDRTFSLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYL- 228
Query: 203 VSAEFYKVESQK 214
V E + +E+ +
Sbjct: 229 VRFEPHLLEASR 240
Score = 164 (62.8 bits), Expect = 2.2e-68, Sum P(4) = 2.2e-68
Identities = 47/121 (38%), Positives = 64/121 (52%)
Query: 491 LVVQVLTTGSWPTQ--------------PSVTCNLPAEMSALCEKFRSYYLGTHTGRRLS 536
L + VLT+ SWP P+V CN P E+ L + F +YL +GR L+
Sbjct: 562 LAISVLTSNSWPPDVMGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLT 621
Query: 537 WQTNMGSADIKATFG--KG--------QKHELNVSTYQMCVLMLFNN---ADRLSYQGNR 583
W + GSADIK F KG +++ELNVSTY M VLMLFN+ + LS++ +
Sbjct: 622 WIGSAGSADIKCVFPPVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQ 681
Query: 584 A 584
A
Sbjct: 682 A 682
Score = 116 (45.9 bits), Expect = 2.2e-68, Sum P(4) = 2.2e-68
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 26 EKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYS 70
++ W +L A+ +I+N N+S L FE LYR +Y +VL K GE+LY+
Sbjct: 22 DQQWDVLREALTDIHNRNSSRLLFEHLYRASYKIVLKKQGERLYT 66
Score = 48 (22.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 49 FEELY-RNAYNMVLHK--FGEKLYSGLVSTMTLHL-KEISKSIEAA-QGGSFLEELNRKW 103
FE Y ++ +LH E+ L++ M L L K + E + + EEL+ K+
Sbjct: 484 FERYYQKHLGRRLLHSRASSEEAEKQLITMMQLELGKHFTSKFEGMFKDITISEELSTKY 543
Query: 104 NDHNKAL 110
+H ++L
Sbjct: 544 GEHIRSL 550
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 516
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 517 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 576
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 623
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 151/408 (37%), Positives = 237/408 (58%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 223 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 282
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 283 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 338
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 339 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 398
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 399 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 458
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 459 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 517
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 518 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 577
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 578 RKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYTVQ 624
Score = 236 (88.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 91/335 (27%), Positives = 164/335 (48%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRS-NK-IQTRLLNTLLELVHRERTGEVINRGL 176
+ + ++E L L WRD + R NK +Q + L L+ +++ ++++ +
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVQNKCL---LKKKKKKKAMRMLSQLI 201
Query: 177 MRNIIKMLMDLGPSVYQED-FEK-PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 234
++ +++LG + ++D F K P L V E + ESQ F+ D + + +
Sbjct: 202 TFILLVFVVELG--LNEDDAFAKGPTLTVYKESF--ESQ-FL--ADTERFYTRESTEFLQ 254
Query: 235 EMERVTHYLDAKSEAKI------TNVVEKEMIANHMPR-----LV--HMD--NSGLVNML 279
+ VT Y+ K+EA++ V E + + R L+ H++ ++ N+L
Sbjct: 255 Q-NPVTEYMK-KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLL 312
Query: 280 LDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLL 337
DK EDLGRMYNL R+ GL +++++ +H+ G + L DP +VQ +L
Sbjct: 313 DADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVL 372
Query: 338 DEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 372
D KY+ ++ SAFNND F AL+ + FIN N
Sbjct: 373 DVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 407
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 152/408 (37%), Positives = 238/408 (58%)
Query: 188 GP--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP SVY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 223 GPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 282
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 283 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRITDGLGELK 338
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 339 KLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDK 398
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 399 ACGRFINNNAVTKMVQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 458
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 459 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD- 517
Query: 475 MHEFYASHPELGDSRTL--VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
++E + H + L +QVL++GSWP Q S T LP+E+ ++F ++Y H+G
Sbjct: 518 LNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSG 577
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W ++ ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 578 RKLTWLYHLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDVYTVQ 624
Score = 391 (142.7 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 104/328 (31%), Positives = 169/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 86 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 145
Query: 125 I-----PSTHKT-PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ T ++ L L WR+ + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 146 VRRECDEGRKGTYEIYSLALVTWRECLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 203
Query: 179 NIIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P SVY+E FE FL + FY ES +F++ EY+K
Sbjct: 204 GVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMK 263
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 264 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 319
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 320 LGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYN 379
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 380 ALVMSAFNNDAGFVAALDKACGRFINNN 407
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 156/411 (37%), Positives = 239/411 (58%)
Query: 188 GP--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP SVY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 220 GPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 279
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 280 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRITDGLGELK 335
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ SH+ G + L DP +VQ LD KY+ ++ SAFNND F AL+
Sbjct: 336 KLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDK 395
Query: 364 -SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYL 413
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y+
Sbjct: 396 VACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYI 455
Query: 414 QEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQD 473
++KDVF+K+Y + LAKRL+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 456 EDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKD 515
Query: 474 TMHEFYASHPELGDSRTL----VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGT 529
++E + H L +S L +QVL++GSWP Q S T LP+E+ ++F ++Y
Sbjct: 516 -LNEQFKKH--LSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYGSR 572
Query: 530 HTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
H+GR+L+W ++ ++ K ++ L ST+QM +L+ FN + S Q
Sbjct: 573 HSGRKLTWLYHLSKGELVTNCFKN-RYTLQASTFQMAILLQFNTENCYSVQ 622
Score = 384 (140.2 bits), Expect = 9.4e-33, P = 9.4e-33
Identities = 106/329 (32%), Positives = 169/329 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 83 GLELYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICAYLNRHW 142
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WR+ + R + ++ N +L+LV +ER GE IN L+
Sbjct: 143 VRRECDEGRKGIYEIYSLALVTWRECLFRP--LNKQVTNAVLKLVEKERNGETINTRLVS 200
Query: 179 NIIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P SVY+E FE FL + FY ES +F++ EY+K
Sbjct: 201 GVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMK 260
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 261 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 316
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ SH+ G + L DP +VQ LD KY+
Sbjct: 317 LGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKYN 376
Query: 345 NIISSAFNNDKTFQNALNS-SFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 377 ALVMSAFNNDAGFVAALDKVACGRFINNN 405
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 151/410 (36%), Positives = 237/410 (57%)
Query: 188 GPS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
GP+ VY+E FE FL + FY ES +F++ EY+KKAE RL EE RV YL
Sbjct: 222 GPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHE 281
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
++ ++ E+ +I H+ + H + N+L DK EDLGRMYNL R+ GL ++
Sbjct: 282 STQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 306 EVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
+++ +H+ G + L DP +VQ +LD KY+ ++ SAFNND F AL+
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 364 SFEYFINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
+ FIN N +SPE ++ + D L+K K E ++E L++VM++F+Y++
Sbjct: 398 ACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIE 457
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIV-KLKTECGYQFTSKLEGMFTDMKTSQD 473
+KDVF+K+Y + LAK L+ + SDDAE S+I KLK CG+++TSKL+ MF D+ S+D
Sbjct: 458 DKDVFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKD 516
Query: 474 TMHEF--YASHPELGDSRT-LVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTH 530
+F + ++ E DS +QVL++GSWP Q S T LP+E+ ++F ++Y H
Sbjct: 517 LNEQFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRH 576
Query: 531 TGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+GR+L+W + ++ K ++ L ST+QM +L+ +N D + Q
Sbjct: 577 SGRKLTWLYQLSKGELVTNCFKN-RYTLQASTFQMAILLQYNTEDAYAVQ 625
Score = 396 (144.5 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 104/328 (31%), Positives = 170/328 (51%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY L + +L + K E S L+ ++W D+ + +++ I Y++R +
Sbjct: 85 GLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHW 144
Query: 125 IP---STHKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
+ + ++E L L WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 145 VRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLIS 202
Query: 179 NIIKMLMDLG----------PS--VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+++ ++LG P+ VY+E FE FL + FY ES +F++ EY+K
Sbjct: 203 GVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMK 262
Query: 227 KAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYED 286
KAE RL EE RV YL ++ ++ E+ +I H+ + H + N+L DK ED
Sbjct: 263 KAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL-EIFHTE---FQNLLDADKNED 318
Query: 287 LGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYD 344
LGRMYNL R+ GL +++++ +H+ G + L DP +VQ +LD KY+
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAFNND F AL+ + FIN N
Sbjct: 379 ALVMSAFNNDAGFVAALDKACGRFINNN 406
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 152/468 (32%), Positives = 266/468 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +QT L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQTILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+++ G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIQDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 177/548 (32%), Positives = 285/548 (52%)
Query: 52 LYRNAYNMVLHK----FGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWNDH 106
LY Y+M L + + ++LY+ + + KE + S+ G L EL ++W +H
Sbjct: 51 LYTIIYDMCLQQPPNDYSQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANH 110
Query: 107 NKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRE 166
++ + Y+DR Y+ ++++G + D + + +IQ+ + LL L+H+E
Sbjct: 111 KILVRWLSRFCFYLDRFYVARRGLPTLNDVGFTSFHDLVYQ--EIQSEAKDVLLALIHKE 168
Query: 167 RTGEVINRGLMRNIIKMLMDLGPS---VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGE 223
R GE I+R L++N+I + G +Y+EDFE L+ +A +Y ++ ++ + C +
Sbjct: 169 REGEQIDRTLVKNVIDVYCGNGVGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPD 228
Query: 224 YLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDK 283
Y+ KAE L E ERVT+YL + +E K+ V+ E++ +L+ ++SG + +L DDK
Sbjct: 229 YMLKAEECLKLEKERVTNYLHSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDK 288
Query: 284 YEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV---TDPERLKDPVE---FVQRLL 337
DL RMY L+R +P GL I ++ H+ G L+ D +D V++ +
Sbjct: 289 MGDLSRMYRLYRLIPQGLEPIADLFKQHVTAEGNALIKQAADAATNQDASASQVLVRKEI 348
Query: 338 DEKDKYDNIISSAFNNDKTFQNALNSSFEYFIN---LNPRSPEFISLFVDD--KLRKGLK 392
+ DKY + F F L +FE F N S E ++ + D+ K R G +
Sbjct: 349 ELHDKYMVYVDECFQKHSLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSE 408
Query: 393 GVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 452
+S+E E L+KV+ L Y+ +KD+F ++Y++ A+RLL +RS I+K T+
Sbjct: 409 KLSDEATEITLEKVVNLLVYISDKDLFAEFYRKKQARRLLF--------DRSGIMKEVTD 460
Query: 453 CGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLP 512
+L+ F D ++ T +LG T V VLTTG WP+ + NLP
Sbjct: 461 I--TLARELQTNFVDYLSANMTT--------KLGIDFT--VTVLTTGFWPSYKTTDLNLP 508
Query: 513 AEMSALCEKFRSYYLGTHTG-RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLF 571
EM E F+ +Y GT T RRLSW ++G+ I F K + EL VSTYQ VL+LF
Sbjct: 509 TEMVNCVEAFKVFY-GTKTNSRRLSWIYSLGTCHILGKFEK-KTMELVVSTYQAAVLLLF 566
Query: 572 NNADRLSY 579
NNA+RLSY
Sbjct: 567 NNAERLSY 574
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 151/468 (32%), Positives = 264/468 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 82 IGELALDMWRKLMVEP--LQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 139
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 140 KFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 199
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V +GL +
Sbjct: 200 SSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKKNDMANMYVLLRAVSTGLPHMI 255
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 256 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 315
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 316 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQ 375
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 376 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 435
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 436 FIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 493
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 494 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 540
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 151/470 (32%), Positives = 264/470 (56%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR ++ +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMIEP--LQAILIRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + N++ +K D+ MY L R V SGL +
Sbjct: 257 SSYGKVIHECQQRMVADHL-QFLHAECH---NIIRQEKRNDMANMYTLLRAVSSGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + +H+ + G + ++ + P +FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 QELQNHIHDEGLRATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISL--FVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
+N P+S PE + L + D+ L+K KG++E +VE L + +F+Y+ +KDV
Sbjct: 373 TSVVNYREPKSICKAPELLELAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDV 432
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
F+K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 FQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKF 492
Query: 479 --YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTH 530
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y
Sbjct: 493 NNFIKNQDTIIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHF 550
Query: 531 TGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+GR+L+W + + ++K + + + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 SGRKLTWLHYLCTGEVKMNY-LCKPYVAMVTTYQMAVLLAFNNSETVSYK 599
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 183/570 (32%), Positives = 300/570 (52%)
Query: 44 ASGLSF--EELYRNAYNMVLHKFGEKLYSGLVST------MTLHLKEISKSIEAAQG-GS 94
ASG ++ E+LY N N+ L K +L L T + + E + A + +
Sbjct: 71 ASGANYVGEDLY-NRLNLFLKKHMSQLLK-LTETKMDEPLLNYYYTEWDRYTSAMKYINN 128
Query: 95 FLEELNRKW-----NDHNKALQ--MIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVR 147
+ +NR W +D K + I ++++ D + TP+ + N D I+
Sbjct: 129 IFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLF------TPLKQRLTNSLLD-IIE 181
Query: 148 SNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEF 207
S + ++ NT L+ G V + GL R K + VY+ FE+ FL + +
Sbjct: 182 SERNGYQI-NT--HLIKGVINGYV-SLGLNREKPKETI---LQVYKSGFEELFLTATENY 234
Query: 208 YKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRL 267
Y ES KFI +Y+KK E RLNEE++RV YL +E+++ EK +I H
Sbjct: 235 YTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKH---- 290
Query: 268 VHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PER 325
V + + +L DK DL RMY+L R+P GL +R + H++ G Q V+
Sbjct: 291 VEVIWNEFQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNG 350
Query: 326 LKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNP---------RSP 376
+ +P +++ LL KY+ +++ AF +D F +L+ + FIN N +SP
Sbjct: 351 VIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSP 410
Query: 377 EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKT 436
E ++ F D L+K E ++E +L+ VM++F+Y+++KDVF+ +Y + LAKRL+ G +
Sbjct: 411 ELLARFTDFLLKKSPNNPEESEMEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTS 470
Query: 437 VSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQ-- 494
S+D E ++I KLK+ CGY++TSKL+ MFTDM S++ + F +H E + +L +
Sbjct: 471 TSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFN-NHIEQVERSSLNIDFS 529
Query: 495 --VLTTGSWPTQP-SVTCNLPAEMSALCEK-FRSYYLGTHTGRRLSWQTNMGSADIKATF 550
VL TGSWP QP S ++P E+ A CE+ F+ +Y H+GR+L+W ++ ++K +
Sbjct: 530 VLVLATGSWPLQPPSTNFSIPKELQA-CEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKY 588
Query: 551 GKGQK--HELNVSTYQMCVLMLFNNADRLS 578
+ K + L STYQ+ VL+ FN + L+
Sbjct: 589 LQTSKSGYTLQCSTYQIGVLLQFNQYETLT 618
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 138/450 (30%), Positives = 249/450 (55%)
Query: 52 LYRNAYNMVL----HKFGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWNDH 106
LY YNM H + ++LY ++ + ++ L EL ++W++H
Sbjct: 42 LYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNH 101
Query: 107 NKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRE 166
++ + Y+DR +I P++E+GL +RD + N++ +++ ++ LV +E
Sbjct: 102 KVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVY--NELHSKVKQAVIALVDKE 159
Query: 167 RTGEVINRGLMRNIIKMLMDLGPSV---YQEDFEKPFLEVSAEFYKVESQKFIECCDCGE 223
R GE I+R L++N++ + +++G Y+EDFE L+ ++ +Y ++ +I+ C +
Sbjct: 160 REGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPD 219
Query: 224 YLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDK 283
Y+ K+E L +E ERV HYL + SE K+ V+ E++ +L+ ++SG +L DDK
Sbjct: 220 YMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDK 279
Query: 284 YEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPE-----------RLKDPVEF 332
+DL RMY L+ ++ GL + + H+ G LV E +++ V
Sbjct: 280 VDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQV-L 338
Query: 333 VQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFIN---LNPRSPEFISLFVDDKLRK 389
++++++ DKY ++ F N F AL +FE F N S E ++ F D+ L+K
Sbjct: 339 IRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKK 398
Query: 390 G-LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVK 448
G + +S+E +E L+KV+ L Y+ +KD+F ++Y++ LA+RLL ++ +DD ERS++ K
Sbjct: 399 GGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 458
Query: 449 LKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
LK +CG QFTSK+EGM TD+ +++ + F
Sbjct: 459 LKQQCGGQFTSKMEGMVTDLTLARENQNSF 488
Score = 477 (173.0 bits), Expect = 5.7e-45, P = 5.7e-45
Identities = 102/279 (36%), Positives = 163/279 (58%)
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+ +T V + +++ V ++++++ DKY ++ F N F AL +FE
Sbjct: 315 LVQQAEDTATNQVANTASVQEQV-LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEI 373
Query: 368 FIN---LNPRSPEFISLFVDDKLRKG-LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYY 423
F N S E ++ F D+ L+KG + +S+E +E L+KV+ L Y+ +KD+F ++Y
Sbjct: 374 FCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFY 433
Query: 424 KQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYA 480
++ LA+RLL ++ +DD ERS++ KLK +CG QFTSK+EGM TD+ + +Q++ ++
Sbjct: 434 RKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLG 493
Query: 481 SHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN 540
S+P L V VLTTG WP+ S NLP+EM E F+ +Y R+L+W +
Sbjct: 494 SNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYS 553
Query: 541 MGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 579
+G+ I F + + EL VSTYQ VL+LFN D+LSY
Sbjct: 554 LGTCHINGKFDQ-KAIELIVSTYQAAVLLLFNTTDKLSY 591
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 149/468 (31%), Positives = 260/468 (55%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR ++ +Q L+ LL+ + +R GE N+ ++ +I + +
Sbjct: 158 IGELALDMWRKLMIEP--LQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQYKK 215
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQE FE PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 216 KFPLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHP 275
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S +K+ + ++ M+A+H+ + +H + N++ +K +D+ MY L R V SGL +
Sbjct: 276 SSYSKVIHECQQRMVADHL-QFLHGECQ---NIIRQEKRDDMANMYTLLRAVSSGLPHMI 331
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
+ + H+ + G + + + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 332 QELQVHIHDEGIRATINLSQENMPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKAL 391
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 392 TSVVNYREPKSICKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 451
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 452 KIYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLNNKFNN 511
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWPTQ--PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ E LG S + VL G+WP PS T +P E+ + F +Y +G
Sbjct: 512 FIKTQETVVDLGIS--FQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSG 569
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + + + V+TYQM VL+ FNN++ +SY+
Sbjct: 570 RKLTWLHYLCTGEVKMNY-LSKPYVAVVTTYQMAVLLAFNNSETVSYK 616
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 618 (222.6 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 141/435 (32%), Positives = 247/435 (56%)
Query: 166 ERTGEVINRGLMRNIIKMLMDLG------P-SVYQEDFEKPFLEVSAEFYKVESQKFIEC 218
+R GE N+ ++ +I + + P YQE FE PFL + E+YK E+ ++
Sbjct: 198 DRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQE 257
Query: 219 CDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNM 278
+C +Y++K RL +E R YL S K+ + ++ M+A+H+ + +H + N+
Sbjct: 258 SNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAECH---NI 313
Query: 279 LLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLD 338
+ +K D+ MY L R V SGL + + + +H+ + G + ++ + P +FV+ +L+
Sbjct: 314 IRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLRATSNLSQENMPTQFVESVLE 373
Query: 339 EKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN-PRS----PEFISLFVDDKLRKGLKG 393
K+ +I++ N D+ F +AL+ + +N P+S PE ++ + D+ L+K KG
Sbjct: 374 VHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKSAKG 433
Query: 394 VSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTEC 453
++E +VE L + +F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK C
Sbjct: 434 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQAC 493
Query: 454 GYQFTSKLEGMFTDMKTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ-P 505
GY+FTSKL M+TDM S D ++F + + + LG S + VL G+WP TQ P
Sbjct: 494 GYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGIS--FQIYVLQAGAWPLTQAP 551
Query: 506 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQM 565
S T +P E+ + F +Y +GR+L+W + + ++K + + + V+TYQM
Sbjct: 552 SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LCKPYVAMVTTYQM 610
Query: 566 CVLMLFNNADRLSYQ 580
VL+ FNN++ +SY+
Sbjct: 611 AVLLAFNNSETVSYK 625
Score = 37 (18.1 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 9/53 (16%), Positives = 23/53 (43%)
Query: 79 HLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT 131
H+ + K + ++ L +R W +++K + + Y++ +I T
Sbjct: 67 HVHHLHKRVLESEE-QVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLT 118
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 149/468 (31%), Positives = 260/468 (55%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---- 188
+ EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 139 IGELALDMWRKLMVEP--LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKK 196
Query: 189 --P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDA 245
P YQ F PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 197 KFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHP 256
Query: 246 KSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIR 305
S K+ + ++ M+A+H+ + +H + ++ ++ D+ MY L R V SGL +
Sbjct: 257 SSYTKVIHECQQRMVADHL-QFLHSECHSIIQQ---ERKNDMANMYVLLRAVSSGLPHMI 312
Query: 306 EVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSF 365
E + H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 313 EELQKHIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKAL 372
Query: 366 EYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFE 420
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+
Sbjct: 373 TSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 421 KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF-- 478
K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN 492
Query: 479 YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+ + + LG S + VL G+WP TQ PS T +P E+ + F +Y +G
Sbjct: 493 FIRNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSG 550
Query: 533 RRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
R+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 551 RKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 172/587 (29%), Positives = 302/587 (51%)
Query: 17 RVVVDPKYAEK-TWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVST 75
+ VV +Y E+ TW I+ + L E LY + L LY ++ +
Sbjct: 22 KAVVMLEYVERATWNDRFSDIYALCVAYPEPLG-ERLYAET-KIFLENHVRHLYKRVLES 79
Query: 76 MTLHLKEISKSIEA-AQGGSFLEELNRKWN-DHNKALQMIRDILMYMDRTYIPSTHKTPV 133
L + E ++G +++ L R N + K ++ L Y + +
Sbjct: 80 EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKLTEADLQYGYGGVDMNEPLMEI 139
Query: 134 HELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG----- 188
EL L++WR +V +Q L+ LL + +R GE N+ ++ +I + +
Sbjct: 140 GELALDMWRKLMVEP--LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKK 197
Query: 189 -P-SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
P YQ F PFL + E+YK E+ ++ +C +Y++K RL +E R YL
Sbjct: 198 FPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPS 257
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
S K+ + ++ M+A+H+ + +H + ++ ++ D+ MY L R V SGL + E
Sbjct: 258 SYTKVIHECQQRMVADHL-QFLHSECHSIIR---HERKNDMANMYVLLRAVSSGLPHMIE 313
Query: 307 VMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFE 366
+ H+ + G + ++ + P FV+ +L+ K+ +I++ N D+ F +AL+ +
Sbjct: 314 ELQRHIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALT 373
Query: 367 YFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEK 421
+N P+S PE ++ + D+ L+K KG++E +VE L + +F+Y+ +KDVF+K
Sbjct: 374 SVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQK 433
Query: 422 YYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--Y 479
+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM S D ++F +
Sbjct: 434 FYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNF 493
Query: 480 ASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCEKFRSYYLGTHTGR 533
+ + LG S + VL G+WP TQ PS T +P E+ + F +Y +GR
Sbjct: 494 IRNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 551
Query: 534 RLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 552 KLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 597
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 146/472 (30%), Positives = 259/472 (54%)
Query: 129 HKTPVHE---LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGL----MRNII 181
H V+E LGL +W++ + KI+ R+L + L+ ++R GE++ M ++I
Sbjct: 125 HPPDVYEIQILGLMIWKERLFF--KIKDRVLKCVEILIQKDRDGELVQHQFISQFMESLI 182
Query: 182 KM-LMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT 240
K+ +D ++Y ++E +LE + +FY ES FI Y+KKAE R++EE +R
Sbjct: 183 KLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQ 242
Query: 241 HYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSG 300
YL++ S K+ ++ +I H L S +N L D+K +++ MY L R+ G
Sbjct: 243 KYLNSSSHDKMRRLLHSILIEKHKELL----QSECINYLKDEKLDEIYNMYKLLSRIEGG 298
Query: 301 LLTIREVMTSHLRETGKQLVTD-PERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
L + E + +++ G + P+R DP +V+ LL ++ +II +FNND +F
Sbjct: 299 LAPVLETVQKYIQHVGIDAIKSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFI 358
Query: 359 NALNSSFEYFINLN------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRY 412
L+ + N N +SPE ++ + D L+KG K E ++E L ++++LF+Y
Sbjct: 359 TVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKGNKQHEEIELEEKLGQIIVLFKY 418
Query: 413 LQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQ 472
+ +KDVF+K+Y + L++RL++G +VSDD E+ +I LK CG+++TSK + MF D+ S
Sbjct: 419 VDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSA 478
Query: 473 DTMHEF--YASHPELGDSRT-LVVQVLTTGSWPTQPSVTCNL-PAEMSALCEKFRSYYLG 528
+T EF + L + + VLT+GSW + + P E++ F+ YY
Sbjct: 479 ETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCISAFQQYYST 538
Query: 529 THTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
H GR+L+W ++ A+ K+ F K + ++ V+ +Q+ +L++FN + +S +
Sbjct: 539 QHQGRKLNWLHHLCKAEAKSFFAK-KSYDFQVTNFQLGILLIFNTQESVSLE 589
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 144/407 (35%), Positives = 219/407 (53%)
Query: 190 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 249
S Y+ FE F+E + FY ES +++ +YLKKAE RL EE E V YL +
Sbjct: 219 SSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLK 278
Query: 250 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 309
+ E +IA H ++H D ML + ED+ RMY L R P+GL +R+
Sbjct: 279 PLLEATEDVLIAQH-EEVLHND---FARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFE 334
Query: 310 SHLRETGKQLVTD--P----ERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNS 363
++ +G V P E DP E+++ LL ++++AF+ D F +L++
Sbjct: 335 EFVKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDT 394
Query: 364 SFEYFINLN-------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEK 416
+F +N N RSPE ++ + D LRK K V +DVE L ++++FRY+++K
Sbjct: 395 AFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDK 454
Query: 417 DVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMH 476
DVF+ +Y + LAKRL++G + S DAE S++ KLK CG+++TSKL+ MF D+ SQ+
Sbjct: 455 DVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITE 514
Query: 477 EFYASHPELGDSRTLVVQVLTTGSWPTQPS-VTCNLPAEMSALCEKFRSYYLGTHTGRRL 535
F+ + VL T WP P+ V +LP E+ L E F++YY H GR+L
Sbjct: 515 AFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKL 574
Query: 536 SWQTNMGSADIKATFGKGQK--HELNVSTYQMCVLMLFNNADRLSYQ 580
SW ++ +IKA + VSTYQM VL+L+N+ D +Y+
Sbjct: 575 SWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYE 621
Score = 204 (76.9 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 76/299 (25%), Positives = 132/299 (44%)
Query: 38 EIYN--HNASGLSFEELYRNAYN-MVLHKFGEKLYSGLVSTMTLHLKEISKS-IEAAQGG 93
E+Y HN + + + + +N + GE LY+ LV + +L + K I
Sbjct: 49 ELYTAIHNYCADASKTITVDNFNDQTANVLGEALYNNLVLYLEEYLARLRKECISQTNHE 108
Query: 94 SFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHK---TPVHE---LGLNLWRDNIVR 147
L + W + + I + Y++R ++ ++ T V++ L L W ++
Sbjct: 109 EQLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHVF- 167
Query: 148 SNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG--------PSV--YQEDFE 197
+ I+ LL LL + ++R E + + + + L P++ Y+ FE
Sbjct: 168 -SHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFE 226
Query: 198 KPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 257
F+E + FY ES +++ +YLKKAE RL EE E V YL + + E
Sbjct: 227 TNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATED 286
Query: 258 EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETG 316
+IA H ++H D ML + ED+ RMY L R P+GL +R+ ++ +G
Sbjct: 287 VLIAQH-EEVLHND---FARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSG 341
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 140/413 (33%), Positives = 225/413 (54%)
Query: 190 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT--------H 241
SVY+++FE F+ ++ FY+ ES F+ EYLK E RL EE +RV
Sbjct: 217 SVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLS 276
Query: 242 YLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 301
YL + + + E+ +I H+ ++ H + L+N D+ +DL RMY+L L
Sbjct: 277 YLHETTADVLKSTCEEVLIEKHL-KIFHTEFQNLLNA---DRNDDLKRMYSLVALSSKNL 332
Query: 302 LTIREVMTSHLRETGKQLVTD---PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQ 358
++ ++ +H+ G + + + DP +VQ +LD KY+ ++ +AFNND F
Sbjct: 333 TDLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFV 392
Query: 359 NALNSSFEYFINLN--------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 410
AL+ + FIN N +SPE ++ + D L+K K ++++E L++VM++F
Sbjct: 393 AALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMVVF 452
Query: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 470
+Y+++KDVF+KYY + LAKRL++ + SDDAE +I KLK CGY++T KL+ MF D+
Sbjct: 453 KYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGV 512
Query: 471 SQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLG 528
S+D F Y + L ++VL++GSWP Q S LP+E+ +F +Y
Sbjct: 513 SKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAA 572
Query: 529 THTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 579
H+GR+L+W M G + + L ST+QM VL+ FN D+LS+
Sbjct: 573 RHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFN--DQLSF 623
Score = 227 (85.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 64/280 (22%), Positives = 134/280 (47%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGS-FLEELNRKWNDHNKALQMIRDILMYMDRT 123
G+KLY L + +L E+ +A G L ++W + + ++ I Y++R
Sbjct: 75 GKKLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRN 134
Query: 124 YIPSTHKT------PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLM 177
++ + ++ L L W+ ++ + + + +L+ + ER G++INR L+
Sbjct: 135 WVKRECEEGQKGIYKIYRLALVAWKGHLFQV--LNEPVTKAVLKSIEEERQGKLINRSLV 192
Query: 178 RNIIKMLMDLG------------PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYL 225
R++I+ ++L SVY+++FE F+ ++ FY+ ES F+ EYL
Sbjct: 193 RDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYL 252
Query: 226 KKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLV---HMD--NSGLVNMLL 280
K E RL EE +RV + ++K+ + +++ + ++ H+ ++ N+L
Sbjct: 253 KHVENRLEEETQRVRGF-NSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLN 311
Query: 281 DDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV 320
D+ +DL RMY+L L ++ ++ +H+ G + +
Sbjct: 312 ADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAI 351
Score = 49 (22.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 404 DKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTV-SDDAERSLIVKLKTECGYQFTSKL- 461
D++ + LQ+ ++ + + LL K + S D E SL + E + +K
Sbjct: 619 DQLSFTVQQLQDNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKR 678
Query: 462 -----EGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQ 494
+ + T++K Q+T+H+ H E + R L++Q
Sbjct: 679 RININQPLKTELKVEQETVHK----HIE--EDRKLLIQ 710
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 584 (210.6 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 164/573 (28%), Positives = 280/573 (48%)
Query: 27 KTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISKS 86
+ W +L + I + + E L+ ++ + LY LV+ + K + +S
Sbjct: 120 RDWAVLSDNVFAILEDRKTVTTLEGLFSKVRSVCDKNQSKVLYDRLVAIVVQFAKSLKES 179
Query: 87 IEAAQG--------GSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT--PVHEL 136
+ A + +LE+ + W + + +IR+I +++DR + +T P+ E
Sbjct: 180 LNAVEQVPLAEDNCEQYLEKFGQIWQAYPVKINLIRNIFLHLDRIALGATDTEILPLWEC 239
Query: 137 GLNLWRD----NIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVY 192
+ +++ NI + K T+L N L + + ++ R + + ++ L+D+ +V+
Sbjct: 240 FMQIFQKTFFPNIFKEFKA-TKLFNALYMAMQK-----IMQRYPVDSPLRSLVDMLQTVH 293
Query: 193 -QEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK- 250
E+F K + E Y E + +C +Y++ E ++N + V D S K
Sbjct: 294 VSEEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVNFDEPSALKD 353
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 310
+ V +I +P ++ D L++ D D+GRM+NL R+ G +R +
Sbjct: 354 VQATVTNCLIQQAIPEILTHDFDDLID---SDNISDIGRMFNLCRQCVGGEDEVRTQFSK 410
Query: 311 HLRETGKQLV-TDPERLKDPVEFVQRLLDEKDKYDNIISSAFN--NDKT-FQNALNSSFE 366
+L++ G++L+ T P+ + V LL K K D I++ +F ND + L+ +FE
Sbjct: 411 YLKKRGEKLIATCPDE-----DLVSELLAFKKKVDFIMTGSFKSANDPVKMRQCLSDAFE 465
Query: 367 YFINLN-PRSPEFISLFVDDKLRKGLKGVSEED-VETILDKVMMLFRYLQEKDVFEKYYK 424
F+N RS E IS L K VS++ ++ ++D+ ++LFRYL+ KDVFE YYK
Sbjct: 466 SFVNKQVDRSAELISKHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYK 525
Query: 425 QHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF--YASH 482
+ LAKRL ++ S DAE+ ++ KLKTECG FT KLEGMF DM S++ F Y H
Sbjct: 526 RGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEH 585
Query: 483 PELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMG 542
+ +V+T WPT + N+P EM ++ +Y H R + W +
Sbjct: 586 MNK-EKANFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLA 644
Query: 543 SADIKATFGKGQKHELNVSTYQMCVLMLFNNAD 575
SA I A+F G K EL + YQ +L+LFN +
Sbjct: 645 SAVISASFRPGCKKELIATMYQTVILLLFNKCE 677
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 551 (199.0 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 152/542 (28%), Positives = 271/542 (50%)
Query: 87 IEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIV 146
+E +QG +L +L N + Q I D + + + + ELGL++WR ++
Sbjct: 101 MEYSQGIKYLHQLYIYLNQQHIKKQKITDTESFYGNLSSDAAEQMEIGELGLDIWRLYMI 160
Query: 147 RSNKIQTRLLNTLLELVHRERTG---------EVINRGLMRNIIKM--LMDLGP-SVYQE 194
+ + L+ +LE + +R ++IN G++ + +++ G +YQE
Sbjct: 161 EY--LSSELVRHILEGIAADRASNGTLDHHRVQIIN-GVIHSFVEVQDYKKTGSLKLYQE 217
Query: 195 DFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNV 254
FE P LE S +Y E+ K + C EY+++ R L E R +L S K+
Sbjct: 218 LFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSLPKLRKE 277
Query: 255 VEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS---H 311
E++ I + + + S M+ +++ +DL MY + + +P L + E++T+ H
Sbjct: 278 CEEKFINDRLGFIY----SECREMVSEERRQDLRNMYVVLKPIPDNLKS--ELITTFLDH 331
Query: 312 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 371
++ G Q V+ + + FV+ +L KY +I+ F ND F +AL+ + IN
Sbjct: 332 IKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKACASVINR 391
Query: 372 NP------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 425
P RS E+++ + D L+K E +++ L + +F+Y+++KDV++K+Y +
Sbjct: 392 RPTERQPCRSAEYVAKYCDTLLKKSK--TCEAEIDQKLTNNITIFKYIEDKDVYQKFYSR 449
Query: 426 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYA----S 481
LAKRL+ ++ S DAE +I +LK CGY+FT+KL MFTD+ S D ++F S
Sbjct: 450 LLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDS 509
Query: 482 HPELGDSRTLVVQVLTTGSWPTQPS--VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQT 539
+ +LG + L ++VL G+WP + + +P E + F YY +GR+L+W
Sbjct: 510 NVDLGIN--LAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYYHKLFSGRKLTWLH 567
Query: 540 NMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQG--NRAGNRDSCFRLEKVP 597
+M ++K + K + + + + TYQM +++LF D LS + N D F+ P
Sbjct: 568 HMCHGELKLSHLK-KSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDETFQKHMQP 626
Query: 598 AI 599
I
Sbjct: 627 II 628
Score = 47 (21.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 20/104 (19%), Positives = 44/104 (42%)
Query: 48 SFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKE-ISKS--IEA----AQGG-SFLEEL 99
SF ++Y ++LY + H++E ++K IE + GG L+
Sbjct: 38 SFSDVYTLCVAQP-EPMADRLYGETKHFLEQHVQEMLAKKVLIEGECSHSNGGPDLLQRY 96
Query: 100 NRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRD 143
W ++++ ++ + + +Y+++ +I T NL D
Sbjct: 97 YITWMEYSQGIKYLHQLYIYLNQQHIKKQKITDTESFYGNLSSD 140
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 132/406 (32%), Positives = 219/406 (53%)
Query: 190 SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEA 249
+VY+E FE FL + +Y +S + ++ EY+KK E L EE R YL S+
Sbjct: 217 TVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRRARVYLHQSSKG 276
Query: 250 KITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMT 309
K+ + ++ H+ + + N+L +K EDLGRMY L R+ +GL ++++
Sbjct: 277 KLARKCRQVLVEKHLEIFL----TEFQNLLNANKSEDLGRMYRLIYRIKNGLGEFKKILE 332
Query: 310 SHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY 367
+H+ G + + L DP +V+ +L+ KY+ ++ SAF N F AL+ +
Sbjct: 333 THIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNALVISAFRNHADFVAALDKACSG 392
Query: 368 FINLNP---------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDV 418
FIN N +SPE ++ + D L+K K E ++E L+ VM +F+Y+ +KDV
Sbjct: 393 FINNNAVTKMAQSSSKSPELLAQYCDSLLKKSSKNPEEAELEDTLNHVMTVFKYMDDKDV 452
Query: 419 FEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEF 478
+K+Y + LAKRL+ + SDDAE S++ KLK CG+++TSKL+ MF D+ S+ ++
Sbjct: 453 VQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIGVSK-ALNAQ 511
Query: 479 YASHPELGDSRTL----VVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRR 534
+ H L DS L + VL+ G WP + S T LP+E+ +F ++Y ++ R+
Sbjct: 512 FKKH--LMDSEPLDLDFSIHVLSYGWWPFEESCTVLLPSELEPCYRRFTAFYASCYSDRK 569
Query: 535 LSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
LSW + ++ + K + L VST+QM +L+ +N D + Q
Sbjct: 570 LSWAYQLSEGELVTNYFKNN-YTLRVSTFQMAILLQYNTEDAYTIQ 614
Score = 328 (120.5 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 90/327 (27%), Positives = 159/327 (48%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G +LY + + HL + K E L+ ++W D+ + +++ I +++
Sbjct: 77 GFELYKRIKEFLKNHLTNLPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGICARLNKHL 136
Query: 125 IPST----HKT-PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 179
+ ST H ++ L + WRD + R + ++ N +L+L+ +ER GE IN L+
Sbjct: 137 LNSTNNEGHNVCEIYSLAMVTWRDCLFRP--LNKQVTNAVLKLIEKERNGESINTRLISG 194
Query: 180 IIKMLMDLG----------P--SVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK 227
I+ ++LG P +VY+E FE FL + +Y +S + ++ EY+KK
Sbjct: 195 AIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKK 254
Query: 228 AERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDL 287
E L EE R YL S+ K+ + ++ H+ + + N+L +K EDL
Sbjct: 255 VEALLLEERRRARVYLHQSSKGKLARKCRQVLVEKHLEIFL----TEFQNLLNANKSEDL 310
Query: 288 GRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTD--PERLKDPVEFVQRLLDEKDKYDN 345
GRMY L R+ +GL ++++ +H+ G + + L DP +V+ +L+ KY+
Sbjct: 311 GRMYRLIYRIKNGLGEFKKILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNA 370
Query: 346 IISSAFNNDKTFQNALNSSFEYFINLN 372
++ SAF N F AL+ + FIN N
Sbjct: 371 LVISAFRNHADFVAALDKACSGFINNN 397
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 135/404 (33%), Positives = 224/404 (55%)
Query: 190 SVYQEDFEKPFLEVSAEFYKVESQKFIECC-DCGEYLKKAERRLNEEMERVTHYLDAKSE 248
+VY+E FE FLE + FY E+ F+ + +Y+ K E RLN+E +R YL++ ++
Sbjct: 226 AVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTK 285
Query: 249 AKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVM 308
+ E +I+N + L + G +L+D + +DL RM+ L RVP+GL +R+ +
Sbjct: 286 TPLATCCESVLISNQLDFLQR--HFG--GLLVDKRDDDLSRMFKLCDRVPNGLDELRKSL 341
Query: 309 TSHLRETGKQLV--TDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFE 366
+H+ + G Q + E D +V+ LL+ ++Y ++++ +F N+ F +L+ +
Sbjct: 342 ENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAAT 401
Query: 367 YFINLNP---RSP---------EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQ 414
FIN N R+P E ++ + D LRK K E ++E + K+M++F+Y+
Sbjct: 402 SFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYID 461
Query: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDT 474
+KDVF K+Y + +KRL+S + SD+AE + I KLK+ CGY++T++L M D + S+D
Sbjct: 462 DKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDL 521
Query: 475 MHEFYASHPE-LGD-SRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG 532
+F + LG S V VL++GSWPT P+ LP ++S E F +Y G
Sbjct: 522 TADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNG 581
Query: 533 RRLSWQTNMGSADIKAT-FGKGQKHELNVSTYQMCVLMLFNNAD 575
RRL+W + +I +T F K K+ +T QMC ++LFN D
Sbjct: 582 RRLTWVYSQSRGEITSTAFPK--KYVFTATTAQMCTMLLFNEQD 623
Score = 245 (91.3 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 81/335 (24%), Positives = 164/335 (48%)
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
G ++Y + + ++ + + G L+ +W + + +++ I Y++R +
Sbjct: 81 GHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHW 140
Query: 125 I----PSTHKT--PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMR 178
I H+ V+ L L +W+ N+ N ++ ++++ +LEL+ ERTG +IN +
Sbjct: 141 IRRELDEGHENIYMVYTLALVVWKRNLF--NDLKDKVIDAMLELIRSERTGSMINSRYIS 198
Query: 179 NIIKMLMDLGPSVYQEDFEKPF----LEVSAEFYKVESQKFIECCDCGEYLKKAERRLNE 234
+++ L++LG + D +K L V EF++V KF+E G Y ++A L+
Sbjct: 199 GVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEV---KFLEATR-GFYTQEAANFLSN 254
Query: 235 EMERVTHYLDAKSEAKITNVVEK-EMIANHMPR--LVHMDNSGLVN------------ML 279
VT Y+ K E ++ ++ ++ N + L S L++ +L
Sbjct: 255 G-GNVTDYM-IKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLL 312
Query: 280 LDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV--TDPERLKDPVEFVQRLL 337
+D + +DL RM+ L RVP+GL +R+ + +H+ + G Q + E D +V+ LL
Sbjct: 313 VDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAKLYVKTLL 372
Query: 338 DEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN 372
+ ++Y ++++ +F N+ F +L+ + FIN N
Sbjct: 373 EVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNN 407
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 146/476 (30%), Positives = 254/476 (53%)
Query: 129 HKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG 188
+++ V+ LN WR+ N ++ +L +LL+++ +RTG N ++ + ++ + LG
Sbjct: 127 NESVVYSDTLNSWRETAF--NPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQLG 184
Query: 189 PS-----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYL 243
P +YQ FE+ FL+ + FYK ES FIE EY++ R+ +E RV Y+
Sbjct: 185 PEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYM 244
Query: 244 DAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLT 303
+ K+T ++ +I+N+ + S +++L++DK DL MY+L RV + L
Sbjct: 245 PISTLEKLTKILNNVLISNYKEQFA----SKFLDILIEDKSSDLVMMYSLLSRV-NHLTP 299
Query: 304 IREVMTSHLRETG-KQLVTD-PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNAL 361
++ + + ++ G K++ ++ E + P + LL +++ +I + ND F A+
Sbjct: 300 LKNIFSDFIKSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAM 359
Query: 362 NSSFEYFINLNPRS----------PEFISLFVDDKLRKGLKGVSEE-DVETILDKVMMLF 410
+ SF +N NP S P +S F D LRKG +S+E ++E L + + LF
Sbjct: 360 DKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGPHHISDEAELEKKLTEAVCLF 419
Query: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 470
+YL +KD+F Y++ L+KRL+ + S+DAE +I KLK G+ + +KL M TDM+
Sbjct: 420 KYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRL 479
Query: 471 SQDTMHEFYASHPELGD-SRTLVVQ----VLTTGSWPT---QPSVTCNLPAEMSALCEKF 522
+D F +H L + S TL Q VLT GSW Q + P+EM + F
Sbjct: 480 CKDININFQ-NH--LNEKSLTLPYQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYF 536
Query: 523 RSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLS 578
S+Y ++ GR L++ + AD+ + KG+ ++L + YQM +L++FN AD+++
Sbjct: 537 ESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKIT 592
Score = 314 (115.6 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 93/375 (24%), Positives = 176/375 (46%)
Query: 26 EKTWKILEHAIHEIYNHNASGLS---FEELYRNAYNMVLHKFGEK----LYSGLVSTMTL 78
++ W E +++ + GLS + E+Y YN EK Y V +
Sbjct: 8 DELWAECEQTFEDLFLNLKKGLSRKRYMEIYTKIYNYC-SSANEKALIDFYIPKVKVLVA 66
Query: 79 HLK-EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTP----- 132
EI E+ + L +WN+ + +++++L +++ + S KT
Sbjct: 67 QKAVEIMSRSESYPNDALLLFFRNQWNEWKMSSNVLKNLLSPVNKIH-SSDKKTTSSSAN 125
Query: 133 -----VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
V+ LN WR+ N ++ +L +LL+++ +RTG N ++ + ++ + L
Sbjct: 126 QNESVVYSDTLNSWRETAF--NPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQL 183
Query: 188 GPS-----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHY 242
GP +YQ FE+ FL+ + FYK ES FIE EY++ R+ +E RV Y
Sbjct: 184 GPEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQY 243
Query: 243 LDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLL 302
+ + K+T ++ +I+N+ + S +++L++DK DL MY+L RV + L
Sbjct: 244 MPISTLEKLTKILNNVLISNYKEQFA----SKFLDILIEDKSSDLVMMYSLLSRV-NHLT 298
Query: 303 TIREVMTSHLRETG-KQLVTD-PERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
++ + + ++ G K++ ++ E + P + LL +++ +I + ND F A
Sbjct: 299 PLKNIFSDFIKSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTA 358
Query: 361 LNSSFEYFINLNPRS 375
++ SF +N NP S
Sbjct: 359 MDKSFSILVNENPAS 373
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 154/539 (28%), Positives = 268/539 (49%)
Query: 66 EKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 125
E LY L + + ++ I I A G L + +W++ + ++ I Y++R ++
Sbjct: 57 EFLYKQLENYIRTYVIAIRDRISACSGDELLGKCTIEWDNFKFSTRICNCIFQYLNRNFV 116
Query: 126 PSTHK------TPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRN 179
+ +++L L++W+ + K++T ++ +LEL+ ER G IN + +
Sbjct: 117 SKKVEDKNGEIVEIYKLALDIWKAEFFDNFKVKT--IDAILELILLERCGSTINSTHISS 174
Query: 180 IIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 239
+++ L +L +Y+ FE FL+ + FYK E E EY+ E RL +E R
Sbjct: 175 VVECLTEL--DIYKVSFEPQFLDATKLFYKQEVLNSKETVI--EYMITVENRLFQEEYRS 230
Query: 240 THYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPS 299
YL + + + E +I++ + + +H + L+ D E L RMY+L RRV
Sbjct: 231 RRYLGPSTNDLLIDSCESILISDRL-KFLHSEFERLLEARKD---EHLTRMYSLCRRVTH 286
Query: 300 GLLTIREVMTSHL----RETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDK 355
GL +R + + ET ++L D P E++ +LL+ + Y N+I+ AF+ +
Sbjct: 287 GLEDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNA 346
Query: 356 TFQNALNSSFEYFINLN------P------RSPEFISLFVDDKLRKGLKGVSEEDVETIL 403
F +L+ + + FI N P RS ++++ + D L+K K V + ET L
Sbjct: 347 LFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKNSK-VQD---ETAL 402
Query: 404 DKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEG 463
DK + + +Y+ EKDVF+ YY+ ++R+++ + SDDAE I L G ++T L
Sbjct: 403 DKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVK 462
Query: 464 MFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALCEKFR 523
M D K S+D EF E +++Q TTG+WP+ + LP E+S + ++F
Sbjct: 463 MVEDAKISKDLTTEFKDIKTEKSIDFNVILQ--TTGAWPSLDQIKIILPRELSTILKEFD 520
Query: 524 SYYLGTHTGRRLSWQTNM--GSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
++Y +H GRRL+W + G + KA F K K+ V+ Q+C L LFN D + +
Sbjct: 521 TFYNASHNGRRLNWAYSQCRGEVNSKA-FEK--KYVFIVTASQLCTLYLFNEQDSFTIE 576
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 121/369 (32%), Positives = 213/369 (57%)
Query: 225 LKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKY 284
++K RL +E R YL S K+ + ++ M+A+H+ + +H + N++ +K
Sbjct: 1 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAECH---NIIRQEKK 56
Query: 285 EDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYD 344
D+ MY L R V +GL + + + +H+ + G + ++ + P FV+ +L+ K+
Sbjct: 57 NDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFV 116
Query: 345 NIISSAFNNDKTFQNALNSSFEYFINLN-PRS----PEFISLFVDDKLRKGLKGVSEEDV 399
+I++ N D+ F +AL+ + +N P+S PE ++ + D+ L+K KG++E +V
Sbjct: 117 QLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEV 176
Query: 400 ETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTS 459
E L + +F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTS
Sbjct: 177 EDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTS 236
Query: 460 KLEGMFTDMKTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNL 511
KL M+TDM S D ++F + + + LG S + VL G+WP TQ PS T +
Sbjct: 237 KLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAI 294
Query: 512 PAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLF 571
P E+ + F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ F
Sbjct: 295 PQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAF 353
Query: 572 NNADRLSYQ 580
NN++ +SY+
Sbjct: 354 NNSETVSYK 362
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 145/489 (29%), Positives = 236/489 (48%)
Query: 103 WNDHNKALQMIRDILMYMDRTYIPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLE 161
WN + ++++++I YMD+T++ P + EL L+L+R+ ++ IQ LN+LL+
Sbjct: 111 WNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQ 170
Query: 162 LVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDC 221
+ + + +++ MLM +Y F +L + + FY ES + I+
Sbjct: 171 SFENLHSSKSTDHAYLQDA--MLMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQELPL 228
Query: 222 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD 281
EYL+ A L E V + + + I V++ +I +H+ L G+ +
Sbjct: 229 EEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDTLT----KGISQFIEK 284
Query: 282 DKYEDLGRMYNL--FRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDE 339
+Y L F L+ + + L + G +LV D KD VQ LL
Sbjct: 285 RDAHSCKLLYALLQFNHETEYLI---QPWSDCLVDVGFKLVNDES--KDDT-LVQELLSF 338
Query: 340 KDKYDNIISSAFNNDKTFQNALNSSFEYFIN----LNPRSP-EFISLFVDDKLRKGLKGV 394
++ +F +D+T A+ +FE FIN +P I+ ++D LR G +
Sbjct: 339 HKFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLRVGEQAS 398
Query: 395 SEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECG 454
+ ++ + +++ LFRY+ KD+FE YYK +AKRLL K+ S E L+ LK CG
Sbjct: 399 GGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCG 458
Query: 455 YQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAE 514
QFT LEGMF D+ S++ F S R L V VL+ WP+ P LP +
Sbjct: 459 SQFTHSLEGMFRDVNISKEFTSSFRHSKAAHNLHRDLYVNVLSQAYWPSYPESHIRLPDD 518
Query: 515 MSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA 574
M + F +YL G+++SW ++G +KA F G K EL++S +Q CVL+ FNN
Sbjct: 519 MQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNK-ELSISLFQACVLLQFNNC 577
Query: 575 ---DRLSYQ 580
+ +SYQ
Sbjct: 578 LGGEGISYQ 586
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 103/207 (49%), Positives = 143/207 (69%)
Query: 82 EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLW 141
++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR Y+ + V+ LGL ++
Sbjct: 16 KVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIF 75
Query: 142 RDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG---PSVYQEDFEK 198
RD +VR I+ L TLL+++ RER GEV++RG +RN +MLM LG SVY+EDFE
Sbjct: 76 RDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEA 135
Query: 199 PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKE 258
PFLE+SAEF+++ESQKF+ Y+KK E R+NEE+ERV H LD +E I VVE+E
Sbjct: 136 PFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERE 195
Query: 259 MIANHMPRLVHMDNSGLVNMLLDDKYE 285
+I+ HM +V M+NSGLV+ML + K E
Sbjct: 196 LISKHMKTIVEMENSGLVHMLKNGKTE 222
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 506 (183.2 bits), Expect = 2.1e-48, P = 2.1e-48
Identities = 163/600 (27%), Positives = 295/600 (49%)
Query: 26 EKTW-KILEHAIHEIYNHNASGLSFEELYRNAYNMVL---HKFGEKLYSGLVSTMTLHLK 81
++TW K+L + ++ + + + Y + + GE+LY+ + H++
Sbjct: 11 DETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAETKIFLENHVR 70
Query: 82 EISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT---------- 131
+ K + ++ L +R W +++K + + Y++ YI T
Sbjct: 71 HLYKRVLESEE-QVLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKLTEADLQYGYGG 129
Query: 132 -----PVHELG---LNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKM 183
P+ E+G L++WR +V +Q L+ LL + +R GE N+ ++ +I
Sbjct: 130 VDMNEPLMEIGELALDMWRKLMVEP--LQNILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 184 LMDLGPSVYQEDFEKPFLEVSAEFYK-VESQKFIECCDCGEYLKKAERRLNEE------M 236
V+ E ++K F +FY+ + F+ + GEY K+ L +E M
Sbjct: 188 F------VHVEQYKKKF---PLKFYQGIFVSPFLT--ETGEYYKQEASNLLQESNCSQYM 236
Query: 237 ERVTHYLDAKSEAKITNVVEK----EMIANHMPRLV--HMD--NSGLVNMLLDDKYEDLG 288
E+V L + E + + ++I R+V H+ +S +++ ++ D+
Sbjct: 237 EKVLGRLKDE-EIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHSECHSIIRHERKNDMA 295
Query: 289 RMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIIS 348
MY L R V SGL + E + H+ + G + ++ + P FV+ +L+ K+ +I+
Sbjct: 296 NMYVLLRAVSSGLPHMIEELQRHIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLIN 355
Query: 349 SAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMM 408
+ N D+ F +AL+ +Y NL L+K KG++E +VE L +
Sbjct: 356 TVLNGDQHFMSALDKLAKYCDNL---------------LKKSAKGMTENEVEDKLTSFIT 400
Query: 409 LFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM 468
+F+Y+ +KDVF+K+Y + LAKRL+ G ++S D+E ++I KLK CGY+FTSKL M+TDM
Sbjct: 401 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDM 460
Query: 469 KTSQDTMHEF--YASHPE----LGDSRTLVVQVLTTGSWP-TQ-PSVTCNLPAEMSALCE 520
S D ++F + + + LG S + VL G+WP TQ PS T +P E+ +
Sbjct: 461 SVSADLNNKFNNFIRNQDTVIDLGIS--FQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQ 518
Query: 521 KFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYQ 580
F +Y +GR+L+W + + ++K + G+ + V+TYQM VL+ FNN++ +SY+
Sbjct: 519 MFELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYK 577
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 457 (165.9 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 102/332 (30%), Positives = 185/332 (55%)
Query: 192 YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKI 251
YQE FEKP L + ++Y +QK + C EY+++ L +E R YL S K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 252 TNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSH 311
+ +K MI H +L ++ +++ +++ +DL MY L + + +GL + + +
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 312 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 371
+++ G + V+ P +FV+ +L +K++++ ++ F +D F + L+ + + +N
Sbjct: 411 VKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNS 470
Query: 372 N------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 425
P++ E ++ + D L+K KG+SE D+E LD +++FRY+++KD+F+K+Y +
Sbjct: 471 KEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSK 530
Query: 426 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPEL 485
LA RL++ ++S DAE +I KLK CGY+FTSKL MFTD+ SQ+ + F ++
Sbjct: 531 MLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADI 590
Query: 486 G----DSRTLVVQ--VLTTGSWPTQ-PSVTCN 510
D + + Q +L GSWP P ++ N
Sbjct: 591 KTVQPDVKFVPTQTMILQAGSWPLNAPQLSTN 622
Score = 133 (51.9 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 56/253 (22%), Positives = 121/253 (47%)
Query: 136 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINR--GLMRNIIKMLMDLGPS 190
L L +W++++V++ I +L+ LL + +R G + N G++ + +KM
Sbjct: 220 LALEIWKEDLVKT--ILPQLVKLLLIAIDNDRKGNFPHIANEVSGVINSFVKMEETDFDV 277
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK-AERRL-----NEEMERVTHYLD 244
V E E + FY+ +K + D +Y A++ L +E ME+V L+
Sbjct: 278 VPAEGARYKARESTTAFYQESFEKPL-LTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLE 336
Query: 245 AKS-EAKI---TNVVEKEM-IANHMPRLVHMDNSGLV--NMLLDDKYEDLGRMYNLFRRV 297
+ AK + VEK + + + H D V +++ +++ +DL MY L + +
Sbjct: 337 QEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPI 396
Query: 298 PSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTF 357
+GL + + ++++ G + V+ P +FV+ +L +K++++ ++ F +D F
Sbjct: 397 QAGLSVMVKEFEEYVKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEF 456
Query: 358 QNALNSSFEYFIN 370
+ L+ + + +N
Sbjct: 457 SSGLDKALQGVVN 469
Score = 122 (48.0 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 444 SLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPEL--GDSRTLVVQVLTTG 499
S + ++ T+ G + ++ + D+KT Q + +F + + S L L+T
Sbjct: 564 SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDV-KFVPTQTMILQAGSWPLNAPQLSTN 622
Query: 500 S--WPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHE 557
S Q +LP + + ++F +Y G H GR+L+W NM D++ T+ +++
Sbjct: 623 SNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYV 681
Query: 558 LNVSTYQMCVLMLFNNADRL 577
+ YQM L+ F D +
Sbjct: 682 AQMYVYQMAALLCFERRDAI 701
Score = 70 (29.7 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 20/110 (18%), Positives = 50/110 (45%)
Query: 22 PKYAE--KTWKILEHAIHEIYN-HNASGLSFEELYRNAYNMVLH---KFGEKLYSGLVST 75
PK E K W L +I +I N + + + + + Y++ + E+LY+ + +
Sbjct: 82 PKVVEFDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEVKAC 141
Query: 76 MTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 125
+ H+++ + I L+E ++ W ++ I + Y+++ ++
Sbjct: 142 IQEHVRQKRQDIVDVDPDLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 457 (165.9 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 102/332 (30%), Positives = 185/332 (55%)
Query: 192 YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKI 251
YQE FEKP L + ++Y +QK + C EY+++ L +E R YL S K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 252 TNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSH 311
+ +K MI H +L ++ +++ +++ +DL MY L + + +GL + + +
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 312 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 371
+++ G + V+ P +FV+ +L +K++++ ++ F +D F + L+ + + +N
Sbjct: 411 VKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNS 470
Query: 372 N------PRSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQ 425
P++ E ++ + D L+K KG+SE D+E LD +++FRY+++KD+F+K+Y +
Sbjct: 471 KEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSK 530
Query: 426 HLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPEL 485
LA RL++ ++S DAE +I KLK CGY+FTSKL MFTD+ SQ+ + F ++
Sbjct: 531 MLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADI 590
Query: 486 G----DSRTLVVQ--VLTTGSWPTQ-PSVTCN 510
D + + Q +L GSWP P ++ N
Sbjct: 591 KTVQPDVKFVPTQTMILQAGSWPLNAPQLSTN 622
Score = 133 (51.9 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 56/253 (22%), Positives = 121/253 (47%)
Query: 136 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINR--GLMRNIIKMLMDLGPS 190
L L +W++++V++ I +L+ LL + +R G + N G++ + +KM
Sbjct: 220 LALEIWKEDLVKT--ILPQLVKLLLIAIDNDRKGNFPHIANEVSGVINSFVKMEETDFDV 277
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK-AERRL-----NEEMERVTHYLD 244
V E E + FY+ +K + D +Y A++ L +E ME+V L+
Sbjct: 278 VPAEGARYKARESTTAFYQESFEKPL-LTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLE 336
Query: 245 AKS-EAKI---TNVVEKEM-IANHMPRLVHMDNSGLV--NMLLDDKYEDLGRMYNLFRRV 297
+ AK + VEK + + + H D V +++ +++ +DL MY L + +
Sbjct: 337 QEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPI 396
Query: 298 PSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTF 357
+GL + + ++++ G + V+ P +FV+ +L +K++++ ++ F +D F
Sbjct: 397 QAGLSVMVKEFEEYVKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEF 456
Query: 358 QNALNSSFEYFIN 370
+ L+ + + +N
Sbjct: 457 SSGLDKALQGVVN 469
Score = 122 (48.0 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 444 SLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPEL--GDSRTLVVQVLTTG 499
S + ++ T+ G + ++ + D+KT Q + +F + + S L L+T
Sbjct: 564 SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDV-KFVPTQTMILQAGSWPLNAPQLSTN 622
Query: 500 S--WPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHE 557
S Q +LP + + ++F +Y G H GR+L+W NM D++ T+ +++
Sbjct: 623 SNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTY-LDKQYV 681
Query: 558 LNVSTYQMCVLMLFNNADRL 577
+ YQM L+ F D +
Sbjct: 682 AQMYVYQMAALLCFERRDAI 701
Score = 70 (29.7 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 20/110 (18%), Positives = 50/110 (45%)
Query: 22 PKYAE--KTWKILEHAIHEIYN-HNASGLSFEELYRNAYNMVLH---KFGEKLYSGLVST 75
PK E K W L +I +I N + + + + + Y++ + E+LY+ + +
Sbjct: 82 PKVVEFDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEVKAC 141
Query: 76 MTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYI 125
+ H+++ + I L+E ++ W ++ I + Y+++ ++
Sbjct: 142 IQEHVRQKRQDIVDVDPDLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 356 (130.4 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 80/267 (29%), Positives = 152/267 (56%)
Query: 26 EKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHL---KE 82
+K W +L AI +I N N S LS+E+LYR AY +VL KFG KLY + + + HL +E
Sbjct: 37 DKNWSVLSSAISQIQNKNVSNLSYEQLYRKAYVLVLRKFGGKLYDNVANVIKTHLLTRRE 96
Query: 83 ISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWR 142
S+ +A F++ + ++W++H +A++ I D+LMY+++ Y+ K +++LG+ L++
Sbjct: 97 KLLSV-SANHDLFMQSILQEWSEHLQAMKFISDVLMYLNKVYVAEHKKLLIYDLGIQLFK 155
Query: 143 DNIVRSN--KIQTRLLNTLLELVHRERTGEVINRGL----MRNIIKMLMD--------LG 188
D +++ N ++ ++++N +++ + + RTG VI + + N++++L++ G
Sbjct: 156 DYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVITSSMYITKIINMMELLVEPSGSSDILFG 215
Query: 189 PSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSE 248
S YQ FE FL+ S E SQ+F+ +YL+ + + +E RV YL +
Sbjct: 216 DSYYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYLPPSTY 275
Query: 249 AKITNVVEKEMIANHMPRLVHMDNSGL 275
K+ ++ MI + + +++ N GL
Sbjct: 276 PKLVELMNNIMIKDKIDKMILSSNQGL 302
Score = 164 (62.8 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 62/278 (22%), Positives = 129/278 (46%)
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNML--LDDKYEDLGRMYNLFRRVPSGLLTIREVM 308
++N+ E I + + D L N++ DD+Y+ L R+ L + + ++ + +
Sbjct: 310 VSNIFEDTNIETYH----YADLKMLYNLIGRFDDEYQLL-RL-RLKEAIVAQGNSLPDYV 363
Query: 309 TSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYF 368
S + +GK+ + ++++ +L +D+ + ++F+ + + + F
Sbjct: 364 RSSIENSGKKQSNNSPAFA--TKWIETILKYRDQLMQVWKNSFDENLMIEQTFTFAMRDF 421
Query: 369 IN-LNPR------SPEFISLFVDDKLRKGLKGVSE-EDV--------ETILDKVMMLFRY 412
IN N R +PE +S+++D +++ KG S +D+ E ++ + R+
Sbjct: 422 INGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLRF 481
Query: 413 LQEKDVFEKYYKQHLAKRLLSGKTVSD-----DAERSLIVKLKTECGYQFTSKLEGMFTD 467
+++KD FE Y H AKR L+ KT + D E ++ KL E G K+ M D
Sbjct: 482 IKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRD 541
Query: 468 MKTSQDTMHEFYASHPELGDSRTLV---VQVLTTGSWP 502
+++S+DT +++ + S LV +++ WP
Sbjct: 542 VRSSKDTTNDWKRYLNKQSKSTDLVEMELKICNVTDWP 579
Score = 74 (31.1 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 512 PAEMSALCEKFRSYYLG--THTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLM 569
P ++ ++F ++ + + L W GS D++ T+ + +E+N+ST+ +++
Sbjct: 602 PRQLRNTIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITY-PSRTYEINLSTFAAIIML 660
Query: 570 LF----NNAD 575
LF NAD
Sbjct: 661 LFAPQSTNAD 670
Score = 42 (19.8 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 16 HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEEL----YRNAYNMVLHKFGEKLYSG 71
+++ +PK+ + + + L + E +HN G + +L ++ N V Y
Sbjct: 219 YQIKFEPKFLKSSEESLYNLSQEFVSHNL-GTKYLQLTTQFIKDEDNRVRFYLPPSTYPK 277
Query: 72 LVSTMT-LHLKE-ISKSIEAAQGG 93
LV M + +K+ I K I ++ G
Sbjct: 278 LVELMNNIMIKDKIDKMILSSNQG 301
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 460 (167.0 bits), Expect = 5.1e-43, P = 5.1e-43
Identities = 121/408 (29%), Positives = 214/408 (52%)
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 250
+Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 310
+ V+ +I H M + LV +L ++ + + RMY L RV L + +
Sbjct: 272 LLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLEL 327
Query: 311 HLRETG----KQLVTDPE------RLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
++++ +++ T E ++ +P +V L+ +++++I+ AF+ D F +
Sbjct: 328 YIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKS 387
Query: 361 LNSSFEYFINLNP----------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 410
L+++ +F+N NP R+PE ++ + D L+ K D E D +M++F
Sbjct: 388 LDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSK-----DNEMNADNLMIVF 442
Query: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 470
+++ E+D FE++Y++ LAKRL++G + S++ E S+I +L+ E ++TSK+ MFTD+K
Sbjct: 443 KFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 471 SQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFRSYYL 527
S D +F L D +V L +WP S N L E+ + F++ YL
Sbjct: 503 SDDLKIKFKDGMNVLFDFSPMV---LARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 528 GTHTGRRLSWQTNMGSADIKA--TFGKGQK-HELNVSTYQMCVLMLFN 572
G+++ W N G A++KA T GKG K VS Q+ VL+ +N
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
Score = 237 (88.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 84/364 (23%), Positives = 170/364 (46%)
Query: 39 IYNH--NAS--GLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGS 94
+YN+ N S G + + N+ N G ++Y L +T E K+++ S
Sbjct: 46 VYNYCVNKSRRGTTPVSISNNSDNNSYSLAGAEIYKKLEEYLT----EFIKNLKRLPNES 101
Query: 95 FLEELNRKWNDHNKALQMIRDILMYMDRTYIP---STHKTPVHELG-LNL--WRDNIVRS 148
FLE RKW + ++ YM+R ++ S + V+++ L+ W+D + +
Sbjct: 102 FLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLSFIKWKDEMFKP 161
Query: 149 NKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG--------PS--VYQEDFEK 198
N L+ +L + ++R +++ L+ + IK L+ L P+ +Y FE
Sbjct: 162 NS--KLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEI 219
Query: 199 PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKE 258
PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++ + V+
Sbjct: 220 PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPLLEVLNAA 279
Query: 259 MIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQ 318
+I H M + LV +L ++ + + RMY L RV L + + ++++
Sbjct: 280 LIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAA 335
Query: 319 LVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFN--NDKTFQNALNSSFEYFINLNPRSP 376
+ + + + E +++++ K Y + + S +N ND + A + ++ +L+
Sbjct: 336 ALEEIQTQAENSEAKKKIVEPK-VYVHTLISIYNRFNDIVVR-AFSKDTKFIKSLDNACR 393
Query: 377 EFIS 380
F++
Sbjct: 394 HFVN 397
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 460 (167.0 bits), Expect = 5.1e-43, P = 5.1e-43
Identities = 121/408 (29%), Positives = 214/408 (52%)
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 250
+Y FE PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTS 310
+ V+ +I H M + LV +L ++ + + RMY L RV L + +
Sbjct: 272 LLEVLNAALIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLEL 327
Query: 311 HLRETG----KQLVTDPE------RLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA 360
++++ +++ T E ++ +P +V L+ +++++I+ AF+ D F +
Sbjct: 328 YIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKS 387
Query: 361 LNSSFEYFINLNP----------RSPEFISLFVDDKLRKGLKGVSEEDVETILDKVMMLF 410
L+++ +F+N NP R+PE ++ + D L+ K D E D +M++F
Sbjct: 388 LDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSK-----DNEMNADNLMIVF 442
Query: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKT 470
+++ E+D FE++Y++ LAKRL++G + S++ E S+I +L+ E ++TSK+ MFTD+K
Sbjct: 443 KFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 471 SQDTMHEFYASHPELGDSRTLVVQVLTTGSWPTQPSVTCN---LPAEMSALCEKFRSYYL 527
S D +F L D +V L +WP S N L E+ + F++ YL
Sbjct: 503 SDDLKIKFKDGMNVLFDFSPMV---LARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 528 GTHTGRRLSWQTNMGSADIKA--TFGKGQK-HELNVSTYQMCVLMLFN 572
G+++ W N G A++KA T GKG K VS Q+ VL+ +N
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
Score = 237 (88.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 84/364 (23%), Positives = 170/364 (46%)
Query: 39 IYNH--NAS--GLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGS 94
+YN+ N S G + + N+ N G ++Y L +T E K+++ S
Sbjct: 46 VYNYCVNKSRRGTTPVSISNNSDNNSYSLAGAEIYKKLEEYLT----EFIKNLKRLPNES 101
Query: 95 FLEELNRKWNDHNKALQMIRDILMYMDRTYIP---STHKTPVHELG-LNL--WRDNIVRS 148
FLE RKW + ++ YM+R ++ S + V+++ L+ W+D + +
Sbjct: 102 FLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLSFIKWKDEMFKP 161
Query: 149 NKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG--------PS--VYQEDFEK 198
N L+ +L + ++R +++ L+ + IK L+ L P+ +Y FE
Sbjct: 162 NS--KLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEI 219
Query: 199 PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKE 258
PFLE + E+Y ES F+ + +Y+KK E R+ EE+ R +YL+ +++ + V+
Sbjct: 220 PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPLLEVLNAA 279
Query: 259 MIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQ 318
+I H M + LV +L ++ + + RMY L RV L + + ++++
Sbjct: 280 LIEKHANE---MYDQFLV-LLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAA 335
Query: 319 LVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFN--NDKTFQNALNSSFEYFINLNPRSP 376
+ + + + E +++++ K Y + + S +N ND + A + ++ +L+
Sbjct: 336 ALEEIQTQAENSEAKKKIVEPK-VYVHTLISIYNRFNDIVVR-AFSKDTKFIKSLDNACR 393
Query: 377 EFIS 380
F++
Sbjct: 394 HFVN 397
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/181 (48%), Positives = 124/181 (68%)
Query: 402 ILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKL 461
+LDK+M++FR++ KDVFE +YK+ LAKRLL GK+ S DAE+S++ KLK ECG FTSKL
Sbjct: 1 MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL 60
Query: 462 EGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCNLPAEMSALC 519
EGMF DM+ S+D M +F Y + + + L V +LT G WPT + +LP EM L
Sbjct: 61 EGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 520 EKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSY 579
E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSL 179
Query: 580 Q 580
+
Sbjct: 180 E 180
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 445 (161.7 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 136/448 (30%), Positives = 221/448 (49%)
Query: 150 KIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYK 209
+I LL ++++ GE++ + L++ S Y + + E S Y
Sbjct: 165 QIDRALLKNVIDVYCGNGMGELVK--YEEDFESFLLEDSASYYSRNASRWNQENSCPDYM 222
Query: 210 VESQKFIECCDCGEYLKKAERRLNEEMERVTH-YLDAKSEAKITNVVEKEMIAN-H---- 263
++++ E L+ + R+ + T L AK + ++ VV K++I N H
Sbjct: 223 IKAE---------ESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCR 273
Query: 264 -MPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRR--VPSGLLTIREVMTSHLRETGKQLV 320
+ R MD+ + L + L + +LF++ G I++ + T K
Sbjct: 274 ALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIKQATEA---ATDKAAS 330
Query: 321 TDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFIN---LNPRSPE 377
T +++D V +++L+D DK+ + F F AL +FE F N S E
Sbjct: 331 TSGLKVQDQV-LIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAE 389
Query: 378 FISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGK 435
++ + D+ L+ G ++ + ED+E L+KV+ L Y+ +KD+F +++++ A+RLL +
Sbjct: 390 ILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDR 449
Query: 436 TVSDDAERSLIVKLKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYASHPELGDSRTLV 492
+D ERSL+ K K G QFTSK+EGM TDM K Q EF + +
Sbjct: 450 NGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFT 509
Query: 493 VQVLTTGSWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTG-RRLSWQTNMGSADIKATFG 551
V VLTTG WP+ + NLP EM E F++YY GT T RRLSW ++G+ + F
Sbjct: 510 VTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKAYY-GTKTNSRRLSWIYSLGTCQLAGKFD 568
Query: 552 KGQKHELNVSTYQMCVLMLFNNADRLSY 579
K + E+ V+TYQ VL+LFNN +RLSY
Sbjct: 569 K-KTIEIVVTTYQAAVLLLFNNTERLSY 595
Score = 392 (143.0 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 105/377 (27%), Positives = 190/377 (50%)
Query: 51 ELYRNAYNMVLHK----FGEKLYSGLVSTMTLHLKE-ISKSIEAAQGGSFLEELNRKWND 105
+LY +N+ K + +++Y + K+ + +I G L EL ++W +
Sbjct: 42 QLYTTVHNLCTQKPPNDYSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWAN 101
Query: 106 HNKALQMIRDILMYMDRTYIP-STHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVH 164
++ + Y+DR Y +H T + +G +RD + + ++Q++ + +L L+H
Sbjct: 102 QKILVRWLSHFFEYLDRFYTRRGSHPT-LSAVGFISFRDLVYQ--ELQSKAKDAVLALIH 158
Query: 165 RERTGEVINRGLMRNIIKMLMD--LGPSV-YQEDFEKPFLEVSAEFYKVESQKFIECCDC 221
+ER GE I+R L++N+I + +G V Y+EDFE LE SA +Y + ++ + C
Sbjct: 159 KEREGEQIDRALLKNVIDVYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSC 218
Query: 222 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD 281
+Y+ KAE L E ERVT+YL + +E K+ V+ E++ +L+ ++SG +L D
Sbjct: 219 PDYMIKAEESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRD 278
Query: 282 DKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLV-------TDPE------RLKD 328
DK +DL RMY L+ +P GL + ++ H+ G L+ TD +++D
Sbjct: 279 DKMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQD 338
Query: 329 PVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFIN---LNPRSPEFISLFVDD 385
V +++L+D DK+ + F F AL +FE F N S E ++ + D+
Sbjct: 339 QV-LIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDN 397
Query: 386 KLRKGLKGVSEEDVETI 402
L+ G G+ + + E +
Sbjct: 398 ILKTG-GGIEKLENEDL 413
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 258 (95.9 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 90/366 (24%), Positives = 170/366 (46%)
Query: 26 EKTWKILEHAIHEI-YNHNASGLSFEELYRNAYNMV--LHKFGEKLYSGLVSTMTLHLKE 82
++ W + +H + + + + ++++L+ + Y + + K+ L + ++ E
Sbjct: 4 DEEWSKADPIVHALLHQKSVTPAAWQDLFYHVYKITSWVDDGPLKIRDILTRCINDYVHE 63
Query: 83 ISKSIEAAQ-GGSFLEELNRKWNDHNKALQMIRDILMYMD----RTYIPSTHKTPVHELG 137
+K I + Q GS L ++WN + ++ +D R +P T + + +
Sbjct: 64 ANKRIRSLQTDGSLLIGYIKEWNRFYQQANILPLPFKKIDESSRRRSVPETPEESIRTVM 123
Query: 138 LNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINR----GLMRNIIKMLMDLGPS--- 190
L W + I+ N I +LL L LV ER G +I+ G+ + + + G
Sbjct: 124 LEKWNE-IIFMN-ISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGEDPLL 181
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAK 250
VY++ FE+ F+E + E+YK + EY+ A+++L EE +R YL+ S
Sbjct: 182 VYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTS 241
Query: 251 ITNVVEKEMIANHMPRLVHMDNSGLV---NMLLDDK-YEDLGRMYNLFRRVPSGLLTIRE 306
++ EK +IA LV ++ + L+ K E L R+Y L RR SG+ T+ +
Sbjct: 242 GKHM-EKAVIA-----LVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGIDTVLK 295
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ +H+R G + + E L DP +VQ+LL DK+ +++ F +D A + +
Sbjct: 296 CIDTHIRTEGLNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKA 355
Query: 365 FEYFIN 370
F +N
Sbjct: 356 FRAVVN 361
Score = 255 (94.8 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 63/258 (24%), Positives = 132/258 (51%)
Query: 335 RLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGL--K 392
RLL +DK + N+ F+ + + +++ + E ++ + D LRK K
Sbjct: 347 RLLTARDK---AFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSK 403
Query: 393 GVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 452
++ E+++ L++V+++ +Y++ KDVF ++++ HL++RL+ + + E ++ KL+ E
Sbjct: 404 KLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLR-E 462
Query: 453 CGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRTLV----VQVLTTGSWPTQPS 506
CG +KL M D++ ++D F + +++++ ++VL G+W S
Sbjct: 463 CGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGS 522
Query: 507 --VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQ 564
+ +LP E+ + ++Y H GR+L W + S + G + +L +T+Q
Sbjct: 523 ERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQ 582
Query: 565 MCVLMLFNNA--DRLSYQ 580
M VL FN+ D++S +
Sbjct: 583 MAVLFCFNDRAHDKISLE 600
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 265 (98.3 bits), Expect = 6.7e-39, Sum P(2) = 6.7e-39
Identities = 62/217 (28%), Positives = 115/217 (52%)
Query: 374 RSPEFISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRL 431
+ PE ++ + D LR+ K ++ E ++ L V+++ +Y+ KDVF +Y+K HL +RL
Sbjct: 480 KCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRL 539
Query: 432 LSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSR 489
+ G + + E ++ L+ E G + ++L MF D+K S+D +F S +
Sbjct: 540 ILGTSADSEKEEDIVEWLR-EVGMPADYVNRLARMFQDIKVSEDLNTQFRTS---ISRHD 595
Query: 490 TLVVQVLTTGSWPT-QPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKA 548
+ +++L G+W V+ +LP E+ +Y H+GR+L W +M + I
Sbjct: 596 AINIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITF 655
Query: 549 TFGKGQKHELNVSTYQMCVLMLFNNA--DRLSYQGNR 583
G +++L+V+T+QM VL +N D++SY+ R
Sbjct: 656 VNNFG-RYDLDVTTFQMAVLFAWNQRQHDKISYENLR 691
Score = 234 (87.4 bits), Expect = 6.7e-39, Sum P(2) = 6.7e-39
Identities = 66/254 (25%), Positives = 134/254 (52%)
Query: 128 THKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL 187
T +PV +L L+ W +I I+ RL + +++VH ER G+ + L+ + + ++L
Sbjct: 208 TEDSPVRKLMLDSWNKHIFHD--IKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNL 265
Query: 188 GPS------VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTH 241
+ +Y+E+FE +L+ + EFY+++S + + Y+K A+ +L EE R
Sbjct: 266 SSNAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKR 325
Query: 242 YLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 301
YL+ S + +T + +I +H+ ++ + L+ D + E L M+ L RV G+
Sbjct: 326 YLEPSSFSILTYTLVNVLIVDHLNSII-AECPALIR---DYETERLNLMFRLMDRVMHGV 381
Query: 302 LTIREVMTS---HLRETG-KQLVTDPERL-KDPVEFVQRLLDEKDKYDNIISSAFNNDKT 356
+ +M H+ G +++ E + +D ++V+RLL+ +K+ +++ +AFN+D
Sbjct: 382 -GVEPMMGDLQRHIMSAGLADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPR 440
Query: 357 FQNALNSSFEYFIN 370
F A + +F+ +N
Sbjct: 441 FLTARDIAFKTVVN 454
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 297 (109.6 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 78/278 (28%), Positives = 142/278 (51%)
Query: 329 PVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINLN--------PRSP---- 376
P +++++LL+ D + I + +F +D AL+++ FIN+N P+S
Sbjct: 376 PKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKT 435
Query: 377 -EFISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGK 435
E ++ + D L+K K D+ + ++ +F+YL +KD FE +Y++ AKRL+ G
Sbjct: 436 SEMLAKYSDILLKKATKPEVASDMSD--EDIITIFKYLTDKDAFETHYRRLFAKRLIHGT 493
Query: 436 TVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYAS---HPELGDSRTLV 492
+ S + E ++I +L+ ++T K+ MF D++ S+ +F + P+ ++
Sbjct: 494 STSAEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPD 553
Query: 493 VQ--VLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 549
+Q VL WP + V LP E+ EK + Y H GR L W + ++KA
Sbjct: 554 LQPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKAD 613
Query: 550 FGKGQKHELN--VSTYQMCVLMLFNNADRLSYQGNRAG 585
GK + N V+ +QM +L+L+N+AD L+ + + G
Sbjct: 614 IGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEG 651
Score = 190 (71.9 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 76/304 (25%), Positives = 143/304 (47%)
Query: 39 IYNH--NASGLS--FEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISKSIEAAQGGS 94
IYN+ N S S F R + +L G ++Y L + +LK + + + +
Sbjct: 55 IYNYCVNKSRSSGHFSTDSRTGQSTIL--VGSEIYEKLKN----YLKNYILNFKQSNSET 108
Query: 95 FLEELNRKWNDHNKALQMIRDILMYMDRTYIPST------HKTPVHELGLNLWRDNIVRS 148
FL+ ++W + YM+R ++ H V+ L L W++ +
Sbjct: 109 FLQFYVKRWKRFTIGAIFLNHAFDYMNRYWVQKERSDGKRHIFDVNTLCLMTWKEVMFDP 168
Query: 149 NKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLG--P--------SVYQEDFEK 198
+K L+N LL+ V R G++I R + IK L+ LG P +VY + FEK
Sbjct: 169 SK--DVLINELLDQVTLGREGQIIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEK 226
Query: 199 PFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKE 258
PFL+ + E+Y + ++E EY+ +A + E + +T Y D ++ ++ + K
Sbjct: 227 PFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKV 286
Query: 259 MIANHMPRLVHMDNSGLVNMLLDDK-YEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGK 317
+I +H+ +L +N +V LLD + E + +Y L RR + + + V +++++TG+
Sbjct: 287 LITDHIEKL---ENEFVV--LLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTGE 341
Query: 318 QLVT 321
++
Sbjct: 342 NEIS 345
Score = 38 (18.4 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 26 EKTWKILEHAIHEIY-NHNASGLSFEELYR 54
E TW +E I++I N + + +Y+
Sbjct: 12 EATWNFIEPGINQILGNEKNQASTSKRVYK 41
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 413 (150.4 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 148/579 (25%), Positives = 268/579 (46%)
Query: 26 EKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHLKEISK 85
E++W+ +++AI IY+ + + LSFE++Y+ Y +VL+K G LY+ L + L + +
Sbjct: 23 EESWETVKYAIDHIYSDDMADLSFEQVYKTIYTIVLNKKGPILYNRLKDYLIQKLALLRE 82
Query: 86 SI--EAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRD 143
+I + FL + R W ++ D++MYMD+ Y V+++ L+L+R
Sbjct: 83 TIVKDNTHDYEFLGTMARLWEVQCHCFKITGDLMMYMDKVYCKPNRCMEVYDMCLDLFRI 142
Query: 144 NIVRSNKIQTRLLNTLLELVHRERT-GEVINR--GLMRNIIKM---LMDLGPSVYQEDFE 197
I++ K + L++ L+ + R R G V + L + +I M L D S + DFE
Sbjct: 143 EILQ--KCSSSLISALISDIERIRNLGSVDSEHTSLWKVLIGMMETLHDNRDSFFLTDFE 200
Query: 198 KPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 257
+ + E+Y IE E L+K + E + +L+ S K+ V+E
Sbjct: 201 PVLISATEEYYNKAID--IELLTPIESLEKIRKLRQFESMLDSSFLNVDSHNKLKTVLEN 258
Query: 258 EMI----ANHMPRLVH----MDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLL--TIREV 307
+I ++ + L H + N L+ + D E+ R+ + + S + I
Sbjct: 259 VLIWGKLSDIIEDLTHEAMVISNGKLLQEIYDLSSEEKYRV-TVIESIKSYINKNAINIP 317
Query: 308 MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNA-LNSSFE 366
R+ G+ +T + + L+ D + ++ + D + NA L F
Sbjct: 318 FNEGNRKKGQNAITWSSEIVELYRSQHSFLESID-FGSVRLNNLTGDVS--NAILGDVFS 374
Query: 367 YFINLNPRSP-EFISLFVDDKLRKGLKGVSE--EDVETILDKVMMLFRYLQEKDVFEKYY 423
+ + P E++S +VD +++ + +E + + +LD ++ L EKD+FEK Y
Sbjct: 375 MYFSKEGALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLI-GLLTEKDIFEKIY 433
Query: 424 KQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHP 483
K+ L++RLL +++ + E+ ++ +K G FTSKLE M D+ S + F S
Sbjct: 434 KKQLSRRLLQQRSLVE-IEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQAFQHSTI 492
Query: 484 ELGDSRTLVVQVLTTGSWP---TQP-SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQT 539
+ + QVLT SWP T P +LP MS + F YY + R L W
Sbjct: 493 NSIEYLSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAH 552
Query: 540 NMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLS 578
++ +I F G +E++ S Y + +LF + + L+
Sbjct: 553 HLSVIEIGCQFNSGY-YEISFSVYAGVIFLLFEDYEELT 590
>UNIPROTKB|H7C1L6 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC073052
EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3 Ensembl:ENST00000436172
Uniprot:H7C1L6
Length = 192
Score = 373 (136.4 bits), Expect = 6.4e-34, P = 6.4e-34
Identities = 73/149 (48%), Positives = 99/149 (66%)
Query: 18 VVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMT 77
+ +D KY W +L++AI EI N SGLSFEELYRNAY MVLHK GEKLY+GL +T
Sbjct: 44 MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVT 103
Query: 78 LHL-KEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHEL 136
HL ++ + + + +FL+ LN+ WNDH A+ MIRDILMYMDR Y+ + V+ L
Sbjct: 104 EHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNL 163
Query: 137 GLNLWRDNIVRSNKIQTRLLNTLLELVHR 165
GL ++RD +VR I+ L TLL+++ R
Sbjct: 164 GLIIFRDQVVRYGCIRDHLRQTLLDMIAR 192
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 359 (131.4 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/229 (33%), Positives = 130/229 (56%)
Query: 14 FKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLV 73
F + + Y ++TW+ L+ A+ I N + + EELY+ N+ +K LY L
Sbjct: 6 FADKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLR 65
Query: 74 STMTLHLK-EISKSIE-AAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT 131
H+K +I + E + FL++++R W +H + + MIR I +++DRTY+
Sbjct: 66 QICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSML 125
Query: 132 P-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS 190
P + ++GL L+R +I+ K+Q + ++ +L L+ RER GE I+R L+R+++ ML DL
Sbjct: 126 PSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDL--Q 183
Query: 191 VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERV 239
+YQ+ FE+ FLE + Y E QK ++ + EYL +RL EE +R+
Sbjct: 184 IYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRL 232
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 379 (138.5 bits), Expect = 5.0e-32, P = 5.0e-32
Identities = 123/433 (28%), Positives = 211/433 (48%)
Query: 166 ERTGEVINRGLMRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQK----FIECCDC 221
+ G V + L+RN I++ L VY FE + S +F+ + +Q+ ++
Sbjct: 300 DENGIVADSSLLRNAIELFHSL--DVYVSGFEPVLVSGSKDFFSLWAQQEATGYLASYVE 357
Query: 222 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHM-DNSGLVNM-- 278
+ + ER +N E+ + + ++ K++ +++ ++ + L+ D GL+ +
Sbjct: 358 NSH-RLIEREMNR-CEQFS--FNRTTKQKLSESLDQTLVTDQESVLLSQKDVLGLLRIGN 413
Query: 279 --LLDDKYEDLGRMYNLFRRVPSGLLT--IREVMTSHLRETGKQLVTDPERLKDPVEFVQ 334
L Y L R +L ++ T + E E+ +V RL + +
Sbjct: 414 KIALGQLYTLLERR-DLGAKLKGAFSTYIVEEGTGIVFDESEADMVV---RLLSFKKQLD 469
Query: 335 RLLDEKDKYDNIISSAFNND-KTFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLK- 392
+ +E + + + A ++F N S NP++ E I+ +VD LR G +
Sbjct: 470 DIWNESFRRNEGLGHALRESFESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRL 529
Query: 393 ---------GVSEEDVETI--LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDA 441
+++ED E LD+V+ LFR++ K VFE +YK LA+RLL G++ SDDA
Sbjct: 530 APTREAENMPLADEDAEINRQLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDA 589
Query: 442 ERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDSRT--LVVQVLTTG 499
E+S++ +LKTECG FT LE MF DM+ ++D M + + E L V VL+
Sbjct: 590 EKSMLARLKTECGSSFTHNLESMFKDMEVARDEMSAYNSIKRERQTPLPVDLHVSVLSAS 649
Query: 500 SWPTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELN 559
+WPT P V +P E++ F +Y + GR+L+W+ + ++A F G K EL
Sbjct: 650 AWPTYPDVQVRIPPEIATAISDFEKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNK-ELV 708
Query: 560 VSTYQMCVLMLFN 572
VS++Q VL+LFN
Sbjct: 709 VSSFQAIVLLLFN 721
Score = 285 (105.4 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 106/422 (25%), Positives = 195/422 (46%)
Query: 24 YAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVSTMTLHL--K 81
Y +K W L+ A+ I++ +S EELY+ A N+ L L H+ K
Sbjct: 149 YFDKVWGQLDAALSAIFSGGKPEISLEELYKGAENVCRQGRATILAKRLQERCRQHVTGK 208
Query: 82 EISKSIEAAQGGSFLEELN---RKWNDHNKALQMIRDILMYMDRTYIPSTHKTPV-HELG 137
++ AQ +E L W + L +R I Y+D++++ + + PV E+G
Sbjct: 209 LHGSLVDKAQMAYNIETLRSVVEAWKEWQSMLITVRWIFYYLDQSFLLHSKEHPVIREMG 268
Query: 138 LNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE---VINRGLMRNIIKMLMDLGPSVYQE 194
L +R +I +Q ++L +LV +R+ E V + L+RN I++ L VY
Sbjct: 269 LQQFRQHIYSDPTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIELFHSL--DVYVS 326
Query: 195 DFEKPFLEVSAEFYKVESQKFIECCD-CGEYLKKAERRLNEEMERVTHY-LDAKSEAKIT 252
FE + S +F+ + +Q+ E Y++ + R + EM R + + ++ K++
Sbjct: 327 GFEPVLVSGSKDFFSLWAQQ--EATGYLASYVENSHRLIEREMNRCEQFSFNRTTKQKLS 384
Query: 253 NVVEKEMIANHMPRLVHM-DNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSH 311
+++ ++ + L+ D GL+ + +K LG++Y L R G ++ +++
Sbjct: 385 ESLDQTLVTDQESVLLSQKDVLGLLR--IGNKIA-LGQLYTLLERRDLGA-KLKGAFSTY 440
Query: 312 LRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEYFINL 371
+ E G +V D + + V RLL K + D+I + +F ++ +AL SFE F+N
Sbjct: 441 IVEEGTGIVFD----ESEADMVVRLLSFKKQLDDIWNESFRRNEGLGHALRESFESFMNK 496
Query: 372 -----------NPRSPEFISLFVDDKLRKGLKGVSEEDVET--ILDKVMMLFRYL-QEKD 417
NP++ E I+ +VD LR G + + E + D+ + R L Q D
Sbjct: 497 GRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLDQVLD 556
Query: 418 VF 419
+F
Sbjct: 557 LF 558
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 342 (125.4 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 83/316 (26%), Positives = 160/316 (50%)
Query: 51 ELYRNAYNMVLHK--FGEKLYSGLVSTMTLH-LKEISKSIEAAQGGSFLEELNRKWNDHN 107
+LY Y+M + + + ++LY + + ++ + S+ L EL ++WN+H
Sbjct: 47 KLYTIIYDMCVQRSDYSQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHK 106
Query: 108 KALQMIRDILMYMDRTYIPSTHKTPV---HELGLNLWRDNIVRSNKIQTRLLNTLLELVH 164
++ + +Y+DR ++ K P+ E+GL + D + ++Q+ ++ L+H
Sbjct: 107 IMVKWLSKFFVYIDR-HLVRRSKIPIPSLDEVGLTCFLDLVYC--EMQSTAKEVVIALIH 163
Query: 165 RERTGEVINRGLMRNIIKMLMDLGPSV---YQEDFEKPFLEVSAEFYKVESQKFIECCDC 221
+ER GE I+R L++N++ + ++ G Y+EDFE L+ +A +Y ++ ++ E C
Sbjct: 164 KEREGEQIDRALVKNVLDIYVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSC 223
Query: 222 GEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLD 281
+Y+ K E L E ERVTHYL + +E K+ ++ E++ + ++SG +L D
Sbjct: 224 PDYMIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRD 283
Query: 282 DKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKD 341
DK DL R+Y L+ +P L + ++ H+ E G L+ + D Q L++ +
Sbjct: 284 DKKNDLSRIYRLYLPIPKRLGRVADLFKKHITEEGNALI----KQADDKTTNQLLIELHN 339
Query: 342 KYDNIISSAFNNDKTF 357
K+ + F N F
Sbjct: 340 KFIVYVIECFQNHTLF 355
>RGD|1563853 [details] [associations]
symbol:Cul4a "cullin 4A" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0051246 "regulation of
protein metabolic process" evidence=ISO] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR001373
Pfam:PF00888 RGD:1563853 GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 IPI:IPI00952377
Ensembl:ENSRNOT00000066778 UCSC:RGD:1563853 ArrayExpress:D3ZL69
Uniprot:D3ZL69
Length = 255
Score = 308 (113.5 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 68/214 (31%), Positives = 118/214 (55%)
Query: 7 RNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGE 66
R I+ F+ R + Y + TW+ L A+ I + + + EELY+ N+ HK
Sbjct: 41 RKLVIKNFRDRPRLPDNYTQDTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSP 100
Query: 67 KLYSGLVSTMTLHLK-EISKSIEAA-QGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
LY L H++ +I E FL+++N W DH + + MIR I +++DRTY
Sbjct: 101 TLYKQLRQVCEDHVQAQILPFREYPFLALLFLQKINTCWQDHCRQMIMIRSIFLFLDRTY 160
Query: 125 IPSTHKTP-VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKM 183
+ P + ++GL L+R++I+ +Q++ ++ +L L+ RER+GE ++R L+R+++ M
Sbjct: 161 VLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSM 220
Query: 184 LMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIE 217
L DL VY++ FE FLE + Y E Q+ ++
Sbjct: 221 LSDL--QVYKDSFELKFLEETNCLYAAEGQRLMQ 252
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 286 (105.7 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 58/130 (44%), Positives = 82/130 (63%)
Query: 453 CGYQFTSKLEGMFTDMKTSQDTMHEF--YASHPELGDSRTLVVQVLTTGSWPTQPSVTCN 510
CG FTSKLEGMF DM+ S+D M +F Y + + + L V +LT G WPT + +
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVH 61
Query: 511 LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLML 570
LP EM L E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++
Sbjct: 62 LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLM 120
Query: 571 FNNADRLSYQ 580
FN + S +
Sbjct: 121 FNEGEEFSLE 130
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 275 (101.9 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 60/207 (28%), Positives = 113/207 (54%)
Query: 52 LYRNAYNMVLHKFGEKLYSGLVSTMTLH-LKEISKSIEAAQGGSFLEELNRKWNDHNKAL 110
++ Y + +K ++LY + + ++ + S+ L EL ++WN H +
Sbjct: 43 MHTATYRICAYKNPQQLYDKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLV 102
Query: 111 QMIRDILMYMDRTYIPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGE 170
++ L+Y+D +++ + E+GLN +RD + R ++Q+ +L L+H+ER GE
Sbjct: 103 RLFSRRLVYLDDSFLSKKGLPSLREVGLNCFRDQVYR--EMQSMAAEAILALIHKEREGE 160
Query: 171 VINRGLMRNIIKMLMDLGPSV---YQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKK 227
I+R L+RN+I + ++ G Y+EDFE+ L+ +A +Y ++ ++I+ C +Y K
Sbjct: 161 QIDRELVRNVIDVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLK 220
Query: 228 AERRLNEEMERVTHYLDAKSEAKITNV 254
++ L E ERVTHYL +E K+ V
Sbjct: 221 PQQCLQRERERVTHYLHPTTEPKLFEV 247
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 279 (103.3 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 106/393 (26%), Positives = 189/393 (48%)
Query: 213 QKFIECCDCG--EYLKKAERRLNEEMERVTHYLDAKSEAKITNVVE--KEMIANHMPRLV 268
Q +++ D E K+A R L E R + + A E + +V KE I P ++
Sbjct: 228 QNYMKYADAKLREEEKRALRYL--ETRRECNSVQALMECCVNALVTSFKETILAECPGMI 285
Query: 269 HMDNSGLVNML--LDDKYED-LGRMYNLFRR--VPSGL---LTIREVMTSHLRETGKQLV 320
+ + ++++ L DK + + M + +GL + E +T+ + +QL+
Sbjct: 286 KRNETDKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLL 345
Query: 321 TDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDKT-FQNALNSSFEYF-INLNP 373
T R +K+ + R L +DK Y ++ ND T F+ L + + P
Sbjct: 346 TLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDATIFKLELPMKQKGVGLKTQP 400
Query: 374 RS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAK 429
S PE ++ + D LRK K ++ ED+E L +V+++ +Y+Q KDVF +Y+K HL +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 430 RLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTDMKTSQDTMHEFYASHP--EL 485
RL+ + + E +++ L+ E G + +KL MF D+K S+D F H +L
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKL 519
Query: 486 G-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGS 543
+ ++ +++L G+W + V +LP E+ L + +Y H+GR+L W M +
Sbjct: 520 ALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSN 579
Query: 544 ADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
I GQ ++L V+T+Q+ VL +N R
Sbjct: 580 GIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/249 (24%), Positives = 127/249 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETR 252
Query: 247 SEAKITNVVEK---EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLT 303
E + + + + + G++ DK L M++L +VP+G+
Sbjct: 253 RECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDK---LHLMFSLMDKVPNGIEP 309
Query: 304 IREVMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNAL 361
+ + + H+ G +V E + D ++V++LL +++ ++ AF +D F A
Sbjct: 310 MLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTAR 369
Query: 362 NSSFEYFIN 370
+ +++ +N
Sbjct: 370 DKAYKAVVN 378
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 276 (102.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 112/428 (26%), Positives = 200/428 (46%)
Query: 176 LMRNIIKMLMDLGPSVYQEDFEKP--FLEVSAEFYKVESQKFIECCDCGEYLKKAERRLN 233
L +N ++ M +E+ ++ +LE E V Q +ECC + + +
Sbjct: 222 LQQNGVQNYMKYADGKLREEEKRALRYLETRRECNSV--QALMECC-VNALVTSFKETIL 278
Query: 234 EEMERVTHYLDAKSEAKITNVVEKEMIAN-H-MPRLVHMDNSGLVNMLLDDKYEDLGRMY 291
E + + +SE ++ + + H M L+ SG+ ML D ED
Sbjct: 279 TECPGMIKRNETESEYGRSSGTKGSASSELHLMFSLMDKVPSGIEPMLKD--LEDHIMSA 336
Query: 292 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNI 346
L V S E +T+ + +QL+T R +K+ + R L +DK Y +
Sbjct: 337 GLADMVASA-----ETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAV 391
Query: 347 ISSAFNNDKT-FQNALNSSFE-YFINLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVE 400
+ ND T F+ L + + P S PE ++ + D LRK K ++ E++E
Sbjct: 392 V-----NDATIFKLELPLKQKGVSLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIE 446
Query: 401 TILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFT 458
L +V+++ +Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G +
Sbjct: 447 AKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYV 505
Query: 459 SKLEGMFTDMKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAE 514
+KL MF D+K S+D F H +L + ++ +++L G+W + V +LP E
Sbjct: 506 NKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTE 565
Query: 515 MSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA 574
+ L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N
Sbjct: 566 LEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQR 624
Query: 575 --DRLSYQ 580
+R+S++
Sbjct: 625 PRERISFE 632
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/255 (23%), Positives = 121/255 (47%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPS-- 190
V +L L+ W ++I + I++RL ++ ++LVH ER GE + L+ + + ++L +
Sbjct: 135 VRKLMLDTWNESIFCN--IKSRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNTD 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+E+FEK +L+ + FYK ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETR 252
Query: 247 SEAK-ITNVVE----------KEMIANHMPRLVHMDNS----GLVNMLLDDKYEDLGRMY 291
E + ++E KE I P ++ + + G + +L M+
Sbjct: 253 RECNSVQALMECCVNALVTSFKETILTECPGMIKRNETESEYGRSSGTKGSASSELHLMF 312
Query: 292 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAF 351
+L +VPSG+ + + + H+ G L D V + + + +KY + + F
Sbjct: 313 SLMDKVPSGIEPMLKDLEDHIMSAG---------LADMVASAETITTDSEKYVEQLLTLF 363
Query: 352 NNDKTFQNALNSSFE 366
N F + +F+
Sbjct: 364 NR---FSKLVKEAFQ 375
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 270 (100.1 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 336 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 390
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 391 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 450
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 451 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 509
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 510 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 569
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 570 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 621
Score = 178 (67.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 60/255 (23%), Positives = 123/255 (48%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 130 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 187
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 188 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 247
Query: 247 SEAK-ITNVVE----------KEMIANHMPRLVHMDN--SGLVNMLLDDK--YEDLGRMY 291
E + ++E KE I ++ + S + ++D + +L M+
Sbjct: 248 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETESRYQYLCVEDGSGFSELHLMF 307
Query: 292 NLFRRVPSGLLTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAF 351
+L +VP+G+ + + + H+ G L D V + + + +KY + + F
Sbjct: 308 SLMDKVPNGIEPMLKDLEEHIISAG---------LADMVAAAETITTDSEKYVEQLLTLF 358
Query: 352 NNDKTFQNALNSSFE 366
N F + +F+
Sbjct: 359 NR---FSKLVKEAFQ 370
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 270 (100.1 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 305 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 359
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 360 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 419
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 420 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 478
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 479 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 538
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 539 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 590
Score = 231 (86.4 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 114 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 171
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 172 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 231
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 232 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 291
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 292 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 351
Query: 365 FEYFIN 370
++ +N
Sbjct: 352 YKAVVN 357
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 270 (100.1 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 305 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 359
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 360 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 419
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 420 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 478
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 479 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 538
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 539 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 590
Score = 231 (86.4 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 114 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 171
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 172 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 231
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 232 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 291
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 292 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 351
Query: 365 FEYFIN 370
++ +N
Sbjct: 352 YKAVVN 357
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 322 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 376
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 377 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 436
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 437 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 495
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 496 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 555
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 556 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 607
Score = 231 (86.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 131 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 188
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 189 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 248
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 249 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 308
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 309 DLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 368
Query: 365 FEYFIN 370
++ +N
Sbjct: 369 YKAVVN 374
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 365 FEYFIN 370
++ +N
Sbjct: 373 YKAVVN 378
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 365 FEYFIN 370
++ +N
Sbjct: 373 YKAVVN 378
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 231 (86.4 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 59/246 (23%), Positives = 127/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP+G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLK 312
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 365 FEYFIN 370
++ +N
Sbjct: 373 YKAVVN 378
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/246 (23%), Positives = 126/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLK 312
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 365 FEYFIN 370
++ +N
Sbjct: 373 YKAVVN 378
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 270 (100.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 83/293 (28%), Positives = 148/293 (50%)
Query: 301 LLTIREVMTSHLRETGKQLVTDPER----LKDPVEFVQRLLDEKDK-YDNIISSAFNNDK 355
++ E +T+ + +QL+T R +K+ + R L +DK Y ++ ND
Sbjct: 326 MVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVV-----NDA 380
Query: 356 T-FQNALNSSFEYF-INLNPRS--PEFISLFVDDKLRKG--LKGVSEEDVETILDKVMML 409
T F+ L + + P S PE ++ + D LRK K ++ E++E L +V+++
Sbjct: 381 TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLV 440
Query: 410 FRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGY--QFTSKLEGMFTD 467
+Y+Q KDVF +Y+K HL +RL+ + + E +++ L+ E G + +KL MF D
Sbjct: 441 LKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQD 499
Query: 468 MKTSQDTMHEFYASHP--ELG-DSRTLVVQVLTTGSWP-TQPSVTCNLPAEMSALCEKFR 523
+K S+D F H +L + ++ +++L G+W + V +LP E+ L +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVE 559
Query: 524 SYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR 576
+Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R
Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPR 611
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/246 (23%), Positives = 126/246 (51%)
Query: 133 VHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS 190
V +L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 135 VRKLMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE 192
Query: 191 ----VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAK 246
+Y+++FEK +L+ + FY+ ++ +++ Y+K A+ +L EE +R YL+ +
Sbjct: 193 DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETR 252
Query: 247 SEAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIRE 306
E + + + + + M+ ++ E L M++L +VP G+ + +
Sbjct: 253 RECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLK 312
Query: 307 VMTSHLRETG-KQLVTDPERLK-DPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSS 364
+ H+ G +V E + D ++V++LL +++ ++ AF +D F A + +
Sbjct: 313 DLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKA 372
Query: 365 FEYFIN 370
++ +N
Sbjct: 373 YKAVVN 378
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 234 (87.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 97/429 (22%), Positives = 188/429 (43%)
Query: 144 NIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI-IKMLMD---LGPSVYQEDFEKP 199
N+V + I T L+N +++++ ++N +++ I K+ +D + Y F K
Sbjct: 454 NVV--DNIGTELVN---DVINKRNNSSLLNNAIIKLINFKLNVDRIIIMSFRYSSYFMKK 508
Query: 200 FLEVSAEFYK--VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 257
+ EV F ++++ ++ YL N + ++ Y KI N
Sbjct: 509 WREVFEHFINKGIQAETYMPII-LSMYLNNLLTMYNACLRKLKKYYILNK--KIKN---N 562
Query: 258 EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGK 317
+ N++ L +D + + + + Y++ +L I++ + + T K
Sbjct: 563 RSLFNNL--LFEVDWNNYCTQPISETID----FYDISTD-SDNMLGIKKYLRKKRKNTKK 615
Query: 318 QLVT-DPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY-FINLNPRS 375
L+ + E + + + D DNI FNN+ F N +++ Y +N+N RS
Sbjct: 616 DLINFEHEEEYVKRKHMDNNIHNNDHNDNIY---FNNNLYFNNDYHNNLYYDSLNINKRS 672
Query: 376 PE--FISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 433
E F L DKL K + + + ++ ++ LFRY+ +K+ FEKYY+ ++ KRL++
Sbjct: 673 DEKIFFHLLKIDKLFKKYHIIGKY-IMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLIN 731
Query: 434 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDS----R 489
+ + + + LK ECG QFT K+E + DMK + T+ +FY P + +
Sbjct: 732 DSSFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRK 791
Query: 490 TLVVQVLTTGSWPTQPSVTCNLPAEMSALC-EKFRSYYLGTHTGRRLSWQTNMGSADIKA 548
V ++ SW + + M +C E F +Y + + + + +G ++
Sbjct: 792 KYAVNIIFNESWEYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRV 851
Query: 549 TFGKGQKHE 557
F K K E
Sbjct: 852 HF-KNFKEE 859
Score = 46 (21.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 540 NMGSADIKATFGK-GQKH-ELNVSTYQMCVLMLFN 572
++ + D +T+ K G+K + V+ Q VL+LFN
Sbjct: 944 DLNNEDSSSTYNKKGKKKIYITVTILQALVLLLFN 978
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 234 (87.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 97/429 (22%), Positives = 188/429 (43%)
Query: 144 NIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNI-IKMLMD---LGPSVYQEDFEKP 199
N+V + I T L+N +++++ ++N +++ I K+ +D + Y F K
Sbjct: 454 NVV--DNIGTELVN---DVINKRNNSSLLNNAIIKLINFKLNVDRIIIMSFRYSSYFMKK 508
Query: 200 FLEVSAEFYK--VESQKFIECCDCGEYLKKAERRLNEEMERVTHYLDAKSEAKITNVVEK 257
+ EV F ++++ ++ YL N + ++ Y KI N
Sbjct: 509 WREVFEHFINKGIQAETYMPII-LSMYLNNLLTMYNACLRKLKKYYILNK--KIKN---N 562
Query: 258 EMIANHMPRLVHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGLLTIREVMTSHLRETGK 317
+ N++ L +D + + + + Y++ +L I++ + + T K
Sbjct: 563 RSLFNNL--LFEVDWNNYCTQPISETID----FYDISTD-SDNMLGIKKYLRKKRKNTKK 615
Query: 318 QLVT-DPERLKDPVEFVQRLLDEKDKYDNIISSAFNNDKTFQNALNSSFEY-FINLNPRS 375
L+ + E + + + D DNI FNN+ F N +++ Y +N+N RS
Sbjct: 616 DLINFEHEEEYVKRKHMDNNIHNNDHNDNIY---FNNNLYFNNDYHNNLYYDSLNINKRS 672
Query: 376 PE--FISLFVDDKLRKGLKGVSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLS 433
E F L DKL K + + + ++ ++ LFRY+ +K+ FEKYY+ ++ KRL++
Sbjct: 673 DEKIFFHLLKIDKLFKKYHIIGKY-IMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLIN 731
Query: 434 GKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYASHPELGDS----R 489
+ + + + LK ECG QFT K+E + DMK + T+ +FY P + +
Sbjct: 732 DSSFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRK 791
Query: 490 TLVVQVLTTGSWPTQPSVTCNLPAEMSALC-EKFRSYYLGTHTGRRLSWQTNMGSADIKA 548
V ++ SW + + M +C E F +Y + + + + +G ++
Sbjct: 792 KYAVNIIFNESWEYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRV 851
Query: 549 TFGKGQKHE 557
F K K E
Sbjct: 852 HF-KNFKEE 859
Score = 46 (21.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 540 NMGSADIKATFGK-GQKH-ELNVSTYQMCVLMLFN 572
++ + D +T+ K G+K + V+ Q VL+LFN
Sbjct: 944 DLNNEDSSSTYNKKGKKKIYITVTILQALVLLLFN 978
>TAIR|locus:2118111 [details] [associations]
symbol:AT4G12100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0031461
EMBL:AL049638 EMBL:AL161533 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 EMBL:AY133688 IPI:IPI00544547 PIR:T06617
RefSeq:NP_192947.1 UniGene:At.33506 ProteinModelPortal:Q9SZ75
SMR:Q9SZ75 PaxDb:Q9SZ75 PRIDE:Q9SZ75 EnsemblPlants:AT4G12100.1
GeneID:826818 KEGG:ath:AT4G12100 TAIR:At4g12100 eggNOG:NOG327349
HOGENOM:HOG000153571 OMA:HECEPHI PhylomeDB:Q9SZ75
ProtClustDB:CLSN2915908 Genevestigator:Q9SZ75 Uniprot:Q9SZ75
Length = 434
Score = 220 (82.5 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 72/293 (24%), Positives = 139/293 (47%)
Query: 24 YAEKTWKILEHAIHEI-----YNHNASGLSFEELYRNAYNMVLH--KFGEKLYSGLVSTM 76
Y K W +L+ AI I Y L F ++R L + E +++ +
Sbjct: 76 YLAKAWDLLKPAIKIILDDDEYKKPGDVLCFTTIFRAVKRACLGDPRQSELVFNLVKHEC 135
Query: 77 TLHLKEISKSIEAAQGGS-----FLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKT 131
H+ E+ +S+E GS FL + +W D + + ++ D+ MY + +
Sbjct: 136 EPHIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDVAMYQ------TLNGL 189
Query: 132 PVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSV 191
+ ++G L+ + + ++Q +++ +L L+ ER G+ N +++K LMD+
Sbjct: 190 TLWDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANN--TSDLLKNLMDMFRMQ 247
Query: 192 YQEDF--EKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERRLNEEMERVT-HYLD-AKS 247
+Q + + PFL+ +++FY E+++ ++ D YLK ER E E+ HY + S
Sbjct: 248 WQCTYVYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDKHYFFFSSS 307
Query: 248 EAKITNVVEKEMIANHMPRLVHMDNSGLVNMLLDDKY-EDLGRMYNLFRRVPS 299
+++ V++ +++ H L G + +L+D+ +DL RMY LF V S
Sbjct: 308 RSRLMKVLKSQLLEAHSSFL----EEGFM-LLMDESLIDDLRRMYRLFSMVDS 355
>TAIR|locus:2102772 [details] [associations]
symbol:AT3G46910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL096859 IPI:IPI00518982
PIR:T12957 RefSeq:NP_190275.1 UniGene:At.53807
ProteinModelPortal:Q9STG3 SMR:Q9STG3 PaxDb:Q9STG3 PRIDE:Q9STG3
DNASU:823844 EnsemblPlants:AT3G46910.1 GeneID:823844
KEGG:ath:AT3G46910 TAIR:At3g46910 eggNOG:NOG292258 KO:K10609
OMA:MENCCLE PhylomeDB:Q9STG3 Genevestigator:Q9STG3 Uniprot:Q9STG3
Length = 247
Score = 173 (66.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 58/225 (25%), Positives = 104/225 (46%)
Query: 24 YAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVL--HKFGEKLYSGLVSTMTLHLK 81
Y E W +L+ AI I+ + L+ NA N GE LY ++ +++
Sbjct: 25 YVEDAWTMLKPAIRAIFLDEPQDFACSGLF-NAVNKSWCEKSSGEALYKLILEECEIYIS 83
Query: 82 EISKSIEA---AQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGL 138
+S+E+ FL L + W D + LQ + I +T P H V +LG
Sbjct: 84 AAIQSLESQCDTDPSLFLSLLEKCWLDFRRKLQFLCSIAGGEGQTVGP--HS--VWDLGS 139
Query: 139 NLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL----------- 187
L ++ + K++ +LL+ +L+L+ +R+ ++ ++N + +M +
Sbjct: 140 ELSPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNTTRPVMSVHMTQLNNLRGL 199
Query: 188 --GPSVYQEDF-EKPFLEVSAEFYKVESQKFIECCDCGEYLKKAE 229
G S+Y+ F +KPF++ + EFY E+ +F E D YLK+ E
Sbjct: 200 FYGQSLYKSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLKRVE 244
>UNIPROTKB|Q5ZMM9 [details] [associations]
symbol:C6H10orf46 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0000082 GO:GO:0008284 GO:GO:0045860 GO:GO:0006511
GO:GO:0031461 eggNOG:NOG302356 HOGENOM:HOG000111684
HOVERGEN:HBG059519 OMA:VMNVITI InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00390000000403 OrthoDB:EOG4VDQ00 EMBL:AADN02030972
EMBL:AADN02030973 EMBL:AJ719355 IPI:IPI00651391
RefSeq:NP_001026409.1 UniGene:Gga.13191 Ensembl:ENSGALT00000015155
GeneID:423926 KEGG:gga:423926 CTD:423926 InParanoid:Q5ZMM9
NextBio:20826322 Uniprot:Q5ZMM9
Length = 347
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 8 NFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKF 64
N F V+ Y W L+ AI ++ + +S+E++Y Y V +
Sbjct: 94 NASTSKFLMNVITIEDYKSTYWPKLDSAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQH 153
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +YM++ Y
Sbjct: 154 SEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNVALGQYMGALQSIVPLFIYMNKFY 213
Query: 125 IPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKML 184
I + + + + L+ +++ + + N + L+ + T I M NI+K L
Sbjct: 214 IETKLNRDLKDDLIKLFTEHVAEKH-----IYNLMPLLLEAQSTPFQITPSTMANIVKGL 268
Query: 185 MDLGPSVYQ 193
L P Q
Sbjct: 269 YTLRPEWVQ 277
>UNIPROTKB|Q86Y37 [details] [associations]
symbol:CACUL1 "CDK2-associated and cullin domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0000082
"G1/S transition of mitotic cell cycle" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IMP] InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 EMBL:AJ544771 EMBL:AY743663
EMBL:AK097728 EMBL:AL139407 EMBL:BC038294 IPI:IPI00410319
IPI:IPI00604719 IPI:IPI00604792 RefSeq:NP_722517.3
UniGene:Hs.420024 ProteinModelPortal:Q86Y37 PhosphoSite:Q86Y37
DMDM:67460542 PRIDE:Q86Y37 Ensembl:ENST00000340214
Ensembl:ENST00000369151 Ensembl:ENST00000369156
Ensembl:ENST00000493518 GeneID:143384 KEGG:hsa:143384
UCSC:uc001lds.1 CTD:143384 GeneCards:GC10M120433 HGNC:HGNC:23727
neXtProt:NX_Q86Y37 PharmGKB:PA134869023 eggNOG:NOG302356
HOGENOM:HOG000111684 HOVERGEN:HBG059519 InParanoid:Q86Y37
OMA:VMNVITI GenomeRNAi:143384 NextBio:84703 ArrayExpress:Q86Y37
Bgee:Q86Y37 CleanEx:HS_C10orf46 Genevestigator:Q86Y37
GermOnline:ENSG00000151893 InterPro:IPR016159 SUPFAM:SSF74788
Uniprot:Q86Y37
Length = 369
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 56/221 (25%), Positives = 98/221 (44%)
Query: 8 NFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKF 64
N F V+ Y W L+ AI ++ + +S+E++Y Y V +
Sbjct: 116 NTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQH 175
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +YM++ Y
Sbjct: 176 SEQMYSDLIKKITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFY 235
Query: 125 IPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKML 184
I + + + + L+ +++ + I + L+ LLE + T + M NI+K L
Sbjct: 236 IETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMANIVKGL 290
Query: 185 MDLGPSVYQED---FEK-------PFLEVSAEFYKVESQKF 215
L P Q F K P +E Y + QKF
Sbjct: 291 YTLRPEWVQMAPTLFSKFIPNILPPAVESELSEYAAQDQKF 331
>UNIPROTKB|E2RQI6 [details] [associations]
symbol:CACUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045860 "positive regulation of protein
kinase activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
Pfam:PF00888 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 OMA:VMNVITI InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00390000000403 EMBL:AAEX03015571
EMBL:AAEX03015572 Ensembl:ENSCAFT00000019069 NextBio:20853255
Uniprot:E2RQI6
Length = 257
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 18 VVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKFGEKLYSGLVS 74
V+ Y W L+ AI ++ + +S+E++Y Y V + E++YS L+
Sbjct: 14 VITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMYSDLIK 73
Query: 75 TMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVH 134
+T HL+ +SK ++A+ ++E N + ALQ I + +YM++ YI + +
Sbjct: 74 KITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIETKLNRDLK 133
Query: 135 ELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQ 193
+ + L+ +++ + I + L+ LLE + T + M NI+K L L P Q
Sbjct: 134 DDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMANIVKGLYTLRPEWVQ 187
>MGI|MGI:1926082 [details] [associations]
symbol:Cacul1 "CDK2 associated, cullin domain 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 MGI:MGI:1926082 GO:GO:0000082 GO:GO:0008284
GO:GO:0045860 GO:GO:0006511 GO:GO:0031461 CTD:143384
eggNOG:NOG302356 HOGENOM:HOG000111684 HOVERGEN:HBG059519
OMA:VMNVITI InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AK019216
EMBL:AK147382 EMBL:AK169791 EMBL:BC026363 IPI:IPI00283079
IPI:IPI00468580 RefSeq:NP_001165567.1 RefSeq:NP_001165568.1
RefSeq:NP_084473.1 UniGene:Mm.259026 UniGene:Mm.447781
ProteinModelPortal:Q8R0X2 PhosphoSite:Q8R0X2 PRIDE:Q8R0X2
Ensembl:ENSMUST00000081790 Ensembl:ENSMUST00000111460 GeneID:78832
KEGG:mmu:78832 UCSC:uc008ibv.2 UCSC:uc012boe.1
GeneTree:ENSGT00390000000403 InParanoid:Q8R0X2 OrthoDB:EOG4VDQ00
NextBio:349612 Bgee:Q8R0X2 CleanEx:MM_2700078E11RIK
Genevestigator:Q8R0X2 GermOnline:ENSMUSG00000033417 Uniprot:Q8R0X2
Length = 377
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 48/189 (25%), Positives = 88/189 (46%)
Query: 8 NFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKF 64
N F V+ Y W L+ AI ++ + +S+E++Y Y V +
Sbjct: 124 NTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQH 183
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +YM++ Y
Sbjct: 184 SEQMYSDLIKKITSHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFY 243
Query: 125 IPSTHKTPVHELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKML 184
I + + + + L+ +++ + I + L+ LLE + T + M NI+K L
Sbjct: 244 IETKLNRDLKDDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMANIVKGL 298
Query: 185 MDLGPSVYQ 193
L P Q
Sbjct: 299 YTLRPEWVQ 307
>UNIPROTKB|F1MUK4 [details] [associations]
symbol:F1MUK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045860 "positive regulation of protein kinase
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
Pfam:PF00888 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860
GO:GO:0006511 GO:GO:0031461 OMA:VMNVITI InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00390000000403 EMBL:DAAA02059379
EMBL:DAAA02059380 EMBL:DAAA02059381 EMBL:DAAA02059382
IPI:IPI00687639 Ensembl:ENSBTAT00000030962 Uniprot:F1MUK4
Length = 375
Score = 163 (62.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 18 VVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKFGEKLYSGLVS 74
V+ Y W L+ AI ++ + +S+E++Y Y V + E++YS L+
Sbjct: 132 VITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQHSEQMYSDLIK 191
Query: 75 TMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVH 134
+T HL+ +SK ++A+ ++E N + ALQ I + +YM++ YI + +
Sbjct: 192 KITNHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFYIETKLNRDLK 251
Query: 135 ELGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDLGPSVYQ 193
+ + L+ +++ + I + L+ LLE + T + M NI+K L L P Q
Sbjct: 252 DDLIKLFTEHVAEKH-IYS-LMPLLLEA---QSTPFQVTPSTMANIVKGLYTLRPEWVQ 305
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 491 LVVQVLTTGSWPTQPSVT-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKAT 549
L V+VLTTG WPTQ + CN+P E FR +YL H+GR+L+ Q +MGSAD+ AT
Sbjct: 43 LTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNAT 102
Query: 550 F-GKGQKHE 557
F G +K +
Sbjct: 103 FYGPVKKED 111
>RGD|1308127 [details] [associations]
symbol:Cacul1 "CDK2-associated, cullin domain 1" species:10116
"Rattus norvegicus" [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO;ISS] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045860 "positive
regulation of protein kinase activity" evidence=ISO;ISS]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
RGD:1308127 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860 GO:GO:0006511
GO:GO:0031461 CTD:143384 eggNOG:NOG302356 HOGENOM:HOG000111684
HOVERGEN:HBG059519 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00390000000403 EMBL:BC083839 IPI:IPI00367594
RefSeq:NP_001014270.1 UniGene:Rn.113118 ProteinModelPortal:Q5XI53
Ensembl:ENSRNOT00000050617 GeneID:365493 KEGG:rno:365493
NextBio:687535 ArrayExpress:Q5XI53 Genevestigator:Q5XI53
GermOnline:ENSRNOG00000009954 Uniprot:Q5XI53
Length = 347
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/145 (23%), Positives = 69/145 (47%)
Query: 8 NFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKF 64
N F V+ Y W L+ AI ++ + +S+E++Y Y V +
Sbjct: 124 NTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQH 183
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +YM++ Y
Sbjct: 184 SEQMYSDLIKKITSHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFY 243
Query: 125 IPSTHKTPVHELGLNLWRDNIVRSN 149
I + + + + L+ +++ +
Sbjct: 244 IETKLNRDLKDDLIKLFTEHVAEKH 268
>UNIPROTKB|Q5XI53 [details] [associations]
symbol:Cacul1 "CDK2-associated and cullin domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
RGD:1308127 GO:GO:0000082 GO:GO:0008284 GO:GO:0045860 GO:GO:0006511
GO:GO:0031461 CTD:143384 eggNOG:NOG302356 HOGENOM:HOG000111684
HOVERGEN:HBG059519 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00390000000403 EMBL:BC083839 IPI:IPI00367594
RefSeq:NP_001014270.1 UniGene:Rn.113118 ProteinModelPortal:Q5XI53
Ensembl:ENSRNOT00000050617 GeneID:365493 KEGG:rno:365493
NextBio:687535 ArrayExpress:Q5XI53 Genevestigator:Q5XI53
GermOnline:ENSRNOG00000009954 Uniprot:Q5XI53
Length = 347
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/145 (23%), Positives = 69/145 (47%)
Query: 8 NFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASG---LSFEELYRNAYNMVLHKF 64
N F V+ Y W L+ AI ++ + +S+E++Y Y V +
Sbjct: 124 NTSTSKFLMNVITIEDYKSTYWPKLDGAIDQLLTQSPGDYIPISYEQIYSCVYKCVCQQH 183
Query: 65 GEKLYSGLVSTMTLHLKEISKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTY 124
E++YS L+ +T HL+ +SK ++A+ ++E N + ALQ I + +YM++ Y
Sbjct: 184 SEQMYSDLIKKITSHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMNKFY 243
Query: 125 IPSTHKTPVHELGLNLWRDNIVRSN 149
I + + + + L+ +++ +
Sbjct: 244 IETKLNRDLKDDLIKLFTEHVAEKH 268
>UNIPROTKB|H0YCA0 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HGNC:HGNC:2556
EMBL:AP002433 EMBL:AP003307 Ensembl:ENST00000532782 Uniprot:H0YCA0
Length = 130
Score = 115 (45.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 136 LGLNLWRDNIVRSNKIQTRLLNTLLELVHRERTGEVINRGLMRNIIKMLMDL--GPS--- 190
L L+ W ++I SN I+ RL ++ ++LVH ER GE + L+ + + ++L P
Sbjct: 35 LMLDTWNESIF-SN-IKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKL 92
Query: 191 -VYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLK 226
+Y+++FEK +L+ + FY+ ++ +++ Y+K
Sbjct: 93 QIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMK 129
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 391 LKG-VSEEDVETILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSD-DAERSLIVK 448
LKG +S+ V+ IL ML + K+ Y+ LA++LL+ KT D D E +
Sbjct: 528 LKGSLSQRKVD-ILG---MLVDIIGSKEQLVNEYRVMLAEKLLN-KTDYDIDTEIRTVEL 582
Query: 449 LKTECGYQFTSKLEGMFTDM---KTSQDTMHEFYASHPELGDSR----TLVVQVLTTGSW 501
LK G + E M D+ K + + + EL ++ TL +L+T W
Sbjct: 583 LKIHFGEASMQRCEIMLNDLIDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFW 642
Query: 502 PTQPSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVS 561
P LP + L + + Y T R+L W+ N+G+ ++ F + + + VS
Sbjct: 643 PPIQDEPLELPGPVDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQF-EDRAMQFTVS 701
Query: 562 TYQMCVLMLFNNADRLSYQ 580
++M F +Y+
Sbjct: 702 PTHAAIIMQFQEKKSWTYK 720
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/88 (23%), Positives = 37/88 (42%)
Query: 2 SNQKKRNF----QIEAFK--HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRN 55
S +K N+ QI K + ++ +Y EK I+ HA+ ++ + R
Sbjct: 96 SEKKHHNYGEEIQIVLCKALEEISIEKQYHEKCLSIVVHALQSFKEQSSDDRQNSDTERV 155
Query: 56 AYNMVLHKFGEKLYSGLVSTMTLHLKEI 83
+ +F L S L++T+ H EI
Sbjct: 156 H---LFSRFQSMLSSTLMTTLPQHFPEI 180
>DICTYBASE|DDB_G0292786 [details] [associations]
symbol:rad50 "DNA recombination/repair protein"
species:44689 "Dictyostelium discoideum" [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=ISS]
[GO:0030870 "Mre11 complex" evidence=IEA;ISS] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007004 "telomere
maintenance via telomerase" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0006302 "double-strand break
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0000019 "regulation of mitotic recombination"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR004584 dictyBase:DDB_G0292786 GO:GO:0005524
GO:GO:0007126 GO:GO:0042803 GenomeReviews:CM000155_GR GO:GO:0046872
GO:GO:0030674 GO:GO:0016887 HSSP:P58301 GO:GO:0006310 GO:GO:0003690
GO:GO:0000781 GO:GO:0006303 GO:GO:0007004 EMBL:AAFI02000196
eggNOG:COG0419 GO:GO:0030870 GO:GO:0000019 KO:K10866
InterPro:IPR013134 PANTHER:PTHR18867 PROSITE:PS51131
RefSeq:XP_629462.1 ProteinModelPortal:Q54CS9 STRING:Q54CS9
PRIDE:Q54CS9 EnsemblProtists:DDB0232401 GeneID:8628852
KEGG:ddi:DDB_G0292786 OMA:NELGTHR ProtClustDB:CLSZ2497082
Uniprot:Q54CS9
Length = 1351
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 87/457 (19%), Positives = 200/457 (43%)
Query: 4 QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLS--FEELYRNAYNMVL 61
Q K+N QI+A + ++P+ +K ++ + ++ N + S FE + N N
Sbjct: 626 QNKKN-QIDA-QLTSSIEPQLKKKQIEL--ESYEKLINDSKLKQSNLFENVNSNNNNNNN 681
Query: 62 HKFGEK--LYSGLVSTMTLHLKEISKSIEAAQGGSFL-EELNRKWNDHNKALQMIRDILM 118
+ G L+ ++ M L L+++ KS + L +E K N +K + ++ +
Sbjct: 682 NNNGITVLLFENKINEMKLSLEKLEKSFIVLESEDILYKEYIEKANQ-DKECSLCKNEMN 740
Query: 119 YMDRTYIPSTHKTPVHELGLNLWRDNIVRSN-KIQTRLLNTLLELVHRERTGEVINRGL- 176
+ T T +T +++ L + I SN KIQ N LL ++ + E+I + +
Sbjct: 741 GNELTSFVHTLETHCNDIPNQLKQLKIEISNSKIQLEKFNKLLPIIVKRE--ELIEKSIP 798
Query: 177 -----MRNIIKMLMDLGPSVYQEDFEKPFLEVSAEFYKVESQKFIECCDCGEYLKKAERR 231
+N+++ + V ++ + LE + Y+ + F + ++ E
Sbjct: 799 ELKESQKNLLEQQLKSNEMVLEKQNQIESLESQSVLYQQVTLVFQYIDQTKQSIQSIESE 858
Query: 232 LNEEMERVTHYLDAKSEAKITNVVEKEM-IANHMPRLVHMDNSGLVNMLLDDKYEDLGRM 290
+ +E + + + S+ + V+K++ I + + + S N +D+ +
Sbjct: 859 IQKEEKEI---MKQSSDLRTIEEVDKDLEIQQEQLKTIEKEISNFTNKQKNDQIGIFEKE 915
Query: 291 YNLFRRVPSGLLTIREV--MTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIIS 348
L + + L TI+ + HLR+T K+L ++ ++L+ +E +Q+ +D+ + +
Sbjct: 916 RQLIS-IKNQLTTIKSASGIIDHLRDTKKELQSNNQQLQLEIENLQQSIDQSNNDAKQLE 974
Query: 349 SAFNN-DKTFQNALNSSFEYFINLNPRSPEFISL---FVD-DKLRKGLKGVSEEDVETIL 403
+ F + F+ +++ + + R SL +D +L K L + E++ E
Sbjct: 975 NEFQQLEIEFEKKIDAYSKEKNTFSVRLDSINSLQSKILDPSELCKQLNEIQEKNQELES 1034
Query: 404 DKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDD 440
+ + YL + +Q+L+ + ++ + +SD+
Sbjct: 1035 NLSTLSQDYLIGQQHISTI-QQNLSSKDITKRAISDN 1070
>WB|WBGene00012198 [details] [associations]
symbol:W02B8.2 species:6239 "Caenorhabditis elegans"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001180 InterPro:IPR001849 InterPro:IPR002219
Pfam:PF00780 PROSITE:PS50003 PROSITE:PS50081 PROSITE:PS50219
SMART:SM00036 SMART:SM00109 SMART:SM00233 GO:GO:0009792
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556
GO:GO:0046872 GO:GO:0005622 eggNOG:NOG12793 GO:GO:0005083
GeneTree:ENSGT00700000105029 HOGENOM:HOG000017587 EMBL:Z81136
PIR:T26101 RefSeq:NP_496914.1 ProteinModelPortal:Q9XVH4 SMR:Q9XVH4
STRING:Q9XVH4 EnsemblMetazoa:W02B8.2 GeneID:175043
KEGG:cel:CELE_W02B8.2 UCSC:W02B8.2 CTD:175043 WormBase:W02B8.2
InParanoid:Q9XVH4 OMA:HAITANE NextBio:886530 Uniprot:Q9XVH4
Length = 1256
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 104/439 (23%), Positives = 185/439 (42%)
Query: 84 SKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTHKTPVHELGLNLWRD 143
SKS + ++ N D L +I+ + R+ + H++ V + GLN
Sbjct: 17 SKSARYSSPYQVIDLNNESQEDLKTRLLEAENIIQDL-RSERDALHESLVDKAGLN--ES 73
Query: 144 NIV-RSNKI---QTRLLN---TLLE--LVHRERTGEVI-NRGLMRNIIKMLMDLGPSVYQ 193
I+ RSNK+ +TR+ TLLE L +E ++ NR L K M S YQ
Sbjct: 74 VIIERSNKVSTQETRIYRRDVTLLEDDLKQKESQIRILQNRCLRLETEKQKMQDTISGYQ 133
Query: 194 EDFEKPFLEV---SAEFYKVE---SQKFIECCDCGEYLKKAERRLNEEMERV-THYLDAK 246
ED ++ + + ++ +K+E S K E GE LK +LNE+ + T +
Sbjct: 134 EDLKENEIRIENLNSRLHKLEDELSAKTHEIFSIGEELKNKTMKLNEKNSQFQTKLAEIS 193
Query: 247 SEAK-ITNVVEK---EMIANHMPRL-VHMDNSGLVNMLLDDKYEDLGRMYNLFRRVPSGL 301
SE + + V+K E+I L VH D +L + K L + +
Sbjct: 194 SENRNLERKVQKFREELIVKDQRSLEVHQDQENTQKVLKEVK--QLSDRLDYLTPKRKDV 251
Query: 302 LTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDNIISSAFNN-DKTFQNA 360
I+E L+ + K + LK ++R L EK++ + KT A
Sbjct: 252 SRIKE-RDDFLQFSAKIIEETMSELKLKNARLERELSEKEELVKVTKEELQELQKTVTQA 310
Query: 361 LNSSFEYFINLNPRSPEFISLFVD---DKL--RKGLKGVSE--EDVETILDKVMMLFRYL 413
+ S + L+ + + D D L R+ LKG E E++E D+ + R +
Sbjct: 311 MGDSEQATKYLHAENMKLTRQKADIRCDLLEARRNLKGFDEKREELEKQRDEALEDVRRI 370
Query: 414 QEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE-CGYQFTSK-LEGMFTDMKTS 471
E K+++ L S K ++++ E I +LK+ GY+ + E + ++ +
Sbjct: 371 TE-------LKKNVEIELRSLKLLAEEREEQ-IDELKSRVAGYEVLRRDHEAVKNELAKA 422
Query: 472 QDTMHEFYASHPELGDSRT 490
++ +++ A H + D ++
Sbjct: 423 EEKLNKMGA-HLVMADKQS 440
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 615 603 0.00086 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 122
No. of states in DFA: 618 (66 KB)
Total size of DFA: 337 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.14u 0.09s 62.23t Elapsed: 00:00:06
Total cpu time: 62.18u 0.09s 62.27t Elapsed: 00:00:07
Start: Tue May 21 05:30:31 2013 End: Tue May 21 05:30:38 2013
WARNINGS ISSUED: 1