Query 007159
Match_columns 615
No_of_seqs 745 out of 3525
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 19:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007159.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007159hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 3.1E-37 6.7E-42 309.4 32.9 401 204-610 26-436 (448)
2 COG2814 AraJ Arabinose efflux 100.0 1.1E-35 2.5E-40 302.9 41.1 379 206-613 12-391 (394)
3 KOG2532 Permease of the major 100.0 2.6E-35 5.6E-40 313.1 39.0 376 235-610 66-449 (466)
4 PRK11663 regulatory protein Uh 100.0 6.4E-35 1.4E-39 313.8 40.4 402 205-614 21-430 (434)
5 PRK03545 putative arabinose tr 100.0 1.6E-34 3.4E-39 306.6 42.5 375 205-609 7-381 (390)
6 PRK09556 uhpT sugar phosphate 100.0 5.2E-35 1.1E-39 317.5 36.5 396 205-607 27-448 (467)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 4.2E-34 9E-39 310.5 40.7 409 201-609 13-451 (465)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.4E-33 3E-38 301.1 40.3 384 204-598 5-411 (412)
9 TIGR00893 2A0114 d-galactonate 100.0 1.8E-33 3.9E-38 297.4 41.0 388 216-606 3-397 (399)
10 PRK10213 nepI ribonucleoside t 100.0 4.4E-32 9.4E-37 287.8 45.1 367 205-602 18-385 (394)
11 PRK11273 glpT sn-glycerol-3-ph 100.0 2.5E-32 5.4E-37 295.2 42.3 402 204-610 26-437 (452)
12 PRK03699 putative transporter; 100.0 1.7E-32 3.8E-37 291.2 38.5 375 204-607 4-379 (394)
13 PRK11551 putative 3-hydroxyphe 100.0 5.9E-32 1.3E-36 288.4 42.3 383 203-609 11-397 (406)
14 PRK09705 cynX putative cyanate 100.0 4E-32 8.7E-37 288.2 39.4 375 204-611 7-384 (393)
15 PLN00028 nitrate transmembrane 100.0 1.6E-31 3.4E-36 290.4 44.5 392 204-608 33-433 (476)
16 TIGR01299 synapt_SV2 synaptic 100.0 1.3E-31 2.8E-36 298.9 44.3 392 203-607 163-733 (742)
17 PRK14995 methyl viologen resis 100.0 1.3E-31 2.9E-36 292.7 41.5 370 204-582 3-412 (495)
18 PRK10091 MFS transport protein 100.0 2.2E-31 4.7E-36 281.6 40.7 372 209-610 5-378 (382)
19 PRK15402 multidrug efflux syst 100.0 8.4E-31 1.8E-35 279.5 44.9 384 203-606 9-393 (406)
20 PRK10406 alpha-ketoglutarate t 100.0 4.7E-31 1E-35 283.6 43.1 388 204-613 19-429 (432)
21 TIGR00890 2A0111 Oxalate/Forma 100.0 6.3E-32 1.4E-36 284.1 34.3 372 206-601 3-375 (377)
22 TIGR00903 2A0129 major facilit 100.0 4.4E-31 9.5E-36 276.6 39.7 359 219-605 3-362 (368)
23 TIGR00891 2A0112 putative sial 100.0 3E-31 6.4E-36 282.2 38.3 380 203-593 8-401 (405)
24 TIGR00712 glpT glycerol-3-phos 100.0 4.5E-31 9.7E-36 284.3 37.6 404 205-613 25-438 (438)
25 PRK15034 nitrate/nitrite trans 100.0 2.5E-30 5.5E-35 273.1 40.8 387 196-611 21-457 (462)
26 TIGR00897 2A0118 polyol permea 100.0 3.4E-30 7.3E-35 274.4 42.3 382 208-608 14-401 (402)
27 TIGR00710 efflux_Bcr_CflA drug 100.0 5.4E-30 1.2E-34 270.9 42.4 360 210-590 8-368 (385)
28 PRK12307 putative sialic acid 100.0 3.1E-30 6.6E-35 277.0 40.9 375 204-594 15-394 (426)
29 TIGR00881 2A0104 phosphoglycer 100.0 2.4E-31 5.2E-36 279.9 29.8 370 215-590 3-379 (379)
30 PRK05122 major facilitator sup 100.0 5.4E-30 1.2E-34 272.6 40.1 370 207-610 15-391 (399)
31 PRK10642 proline/glycine betai 100.0 1.9E-29 4.1E-34 275.5 45.0 389 206-607 15-429 (490)
32 PRK03633 putative MFS family t 100.0 1.1E-29 2.3E-34 268.7 41.5 363 208-605 7-369 (381)
33 TIGR00899 2A0120 sugar efflux 100.0 9.2E-30 2E-34 268.2 38.9 365 215-607 5-373 (375)
34 COG2223 NarK Nitrate/nitrite t 100.0 1.2E-30 2.6E-35 262.7 30.2 383 204-610 11-403 (417)
35 TIGR00892 2A0113 monocarboxyla 100.0 6.1E-30 1.3E-34 276.4 37.6 387 205-603 17-416 (455)
36 TIGR00879 SP MFS transporter, 100.0 1.8E-30 3.9E-35 281.9 33.6 402 206-611 27-473 (481)
37 PRK10504 putative transporter; 100.0 2.3E-29 4.9E-34 273.9 41.8 371 208-587 11-419 (471)
38 PRK09874 drug efflux system pr 100.0 3.9E-29 8.5E-34 266.7 41.5 374 210-610 17-400 (408)
39 PRK12382 putative transporter; 100.0 3.6E-29 7.7E-34 265.7 40.6 366 210-609 18-390 (392)
40 TIGR00900 2A0121 H+ Antiporter 100.0 1.8E-29 3.9E-34 264.3 37.8 355 213-585 5-365 (365)
41 PRK15403 multidrug efflux syst 100.0 8.5E-29 1.8E-33 264.2 43.3 366 213-599 22-388 (413)
42 PRK10489 enterobactin exporter 100.0 1.7E-29 3.6E-34 270.5 36.9 368 216-606 26-397 (417)
43 PRK15075 citrate-proton sympor 100.0 5.1E-29 1.1E-33 268.0 40.6 360 205-586 13-397 (434)
44 TIGR00711 efflux_EmrB drug res 100.0 1.1E-29 2.4E-34 277.2 36.0 366 208-583 3-410 (485)
45 PRK09952 shikimate transporter 100.0 1.1E-28 2.3E-33 265.6 42.6 387 204-609 19-434 (438)
46 PF07690 MFS_1: Major Facilita 100.0 2.9E-30 6.2E-35 269.1 29.1 347 213-574 2-352 (352)
47 PRK03893 putative sialic acid 100.0 3E-29 6.5E-34 274.8 38.2 388 204-602 17-447 (496)
48 PRK11652 emrD multidrug resist 100.0 2.7E-28 5.9E-33 259.1 44.1 359 205-588 6-365 (394)
49 PRK11102 bicyclomycin/multidru 100.0 1E-28 2.2E-33 260.7 40.2 369 221-611 5-375 (377)
50 PRK11043 putative transporter; 100.0 3.7E-28 7.9E-33 258.8 44.1 349 216-590 15-364 (401)
51 PRK10133 L-fucose transporter; 100.0 2.8E-28 6E-33 261.8 42.1 372 206-603 25-428 (438)
52 PRK10473 multidrug efflux syst 100.0 5E-28 1.1E-32 256.9 42.0 269 209-494 5-273 (392)
53 TIGR00902 2A0127 phenyl propri 100.0 2.9E-28 6.2E-33 257.8 39.0 362 212-603 9-374 (382)
54 TIGR00895 2A0115 benzoate tran 100.0 1.3E-28 2.8E-33 261.0 35.3 366 204-580 14-397 (398)
55 cd06174 MFS The Major Facilita 100.0 4.3E-28 9.3E-33 252.1 38.4 345 212-606 4-350 (352)
56 PRK11646 multidrug resistance 100.0 4.9E-28 1.1E-32 257.4 38.9 366 217-612 20-392 (400)
57 PRK15011 sugar efflux transpor 100.0 9.4E-28 2E-32 254.8 40.9 361 216-607 24-390 (393)
58 PRK11195 lysophospholipid tran 100.0 6.1E-28 1.3E-32 256.0 38.6 371 212-609 8-381 (393)
59 PRK10077 xylE D-xylose transpo 100.0 6.9E-28 1.5E-32 262.8 38.8 399 205-610 10-459 (479)
60 PRK11010 ampG muropeptide tran 100.0 6.3E-27 1.4E-31 254.8 43.6 378 212-609 17-404 (491)
61 TIGR00885 fucP L-fucose:H+ sym 100.0 2.2E-27 4.8E-32 252.6 39.1 365 209-599 5-403 (410)
62 PRK10054 putative transporter; 100.0 1.5E-27 3.2E-32 253.3 36.5 365 214-605 14-381 (395)
63 PRK11128 putative 3-phenylprop 100.0 3.6E-27 7.7E-32 249.5 39.0 357 216-603 13-374 (382)
64 PF05977 MFS_3: Transmembrane 100.0 1.2E-26 2.6E-31 251.1 39.8 378 209-607 12-393 (524)
65 PRK11902 ampG muropeptide tran 100.0 6.2E-26 1.3E-30 241.7 43.0 373 213-609 5-391 (402)
66 KOG1330 Sugar transporter/spin 100.0 7.3E-29 1.6E-33 251.5 18.8 378 203-587 29-417 (493)
67 TIGR00886 2A0108 nitrite extru 100.0 4.5E-27 9.8E-32 246.9 33.0 347 211-569 5-365 (366)
68 TIGR00896 CynX cyanate transpo 100.0 4.4E-27 9.5E-32 246.2 31.5 331 224-585 17-350 (355)
69 TIGR00883 2A0106 metabolite-pr 100.0 6.5E-27 1.4E-31 247.5 33.0 361 218-598 4-391 (394)
70 TIGR00887 2A0109 phosphate:H+ 100.0 3.9E-26 8.4E-31 250.2 39.3 396 204-605 13-486 (502)
71 KOG2504 Monocarboxylate transp 100.0 5.7E-27 1.2E-31 252.3 31.7 394 205-608 44-476 (509)
72 KOG2533 Permease of the major 100.0 7E-27 1.5E-31 249.1 31.1 280 207-488 45-337 (495)
73 PRK09528 lacY galactoside perm 100.0 2.8E-26 6E-31 245.8 33.3 377 215-611 18-406 (420)
74 TIGR00898 2A0119 cation transp 100.0 2.7E-26 5.8E-31 252.0 31.8 361 228-607 110-494 (505)
75 PRK06814 acylglycerophosphoeth 100.0 1E-25 2.3E-30 270.6 37.2 348 242-603 52-417 (1140)
76 TIGR00882 2A0105 oligosacchari 100.0 4.1E-25 8.9E-30 234.9 37.6 375 211-605 6-392 (396)
77 TIGR00889 2A0110 nucleoside tr 99.9 1.5E-24 3.2E-29 231.8 37.9 368 215-611 10-405 (418)
78 TIGR02718 sider_RhtX_FptX side 99.9 3.4E-24 7.5E-29 227.3 40.1 375 209-603 3-386 (390)
79 COG0738 FucP Fucose permease [ 99.9 1.3E-24 2.8E-29 217.7 33.6 375 208-608 14-409 (422)
80 TIGR00924 yjdL_sub1_fam amino 99.9 2.6E-24 5.7E-29 233.2 38.7 399 210-610 13-470 (475)
81 PRK08633 2-acyl-glycerophospho 99.9 1.8E-24 3.8E-29 260.7 40.4 361 224-600 27-402 (1146)
82 TIGR00805 oat sodium-independe 99.9 1.9E-25 4E-30 248.9 28.8 281 210-490 36-397 (633)
83 COG2807 CynX Cyanate permease 99.9 9.3E-24 2E-28 208.4 35.7 373 206-609 11-386 (395)
84 KOG3764 Vesicular amine transp 99.9 9.3E-26 2E-30 224.0 20.1 353 231-609 95-455 (464)
85 TIGR00901 2A0125 AmpG-related 99.9 1.3E-23 2.9E-28 219.9 35.8 324 224-567 5-355 (356)
86 TIGR00792 gph sugar (Glycoside 99.9 1E-23 2.3E-28 227.1 31.7 339 229-587 22-384 (437)
87 PRK10207 dipeptide/tripeptide 99.9 2.2E-22 4.9E-27 218.2 38.8 401 206-607 13-475 (489)
88 TIGR00806 rfc RFC reduced fola 99.9 1.6E-22 3.5E-27 209.6 31.6 371 221-602 40-442 (511)
89 KOG2615 Permease of the major 99.9 1.4E-22 3E-27 200.3 25.0 358 233-600 59-432 (451)
90 PF03825 Nuc_H_symport: Nucleo 99.9 7.5E-21 1.6E-25 200.2 38.8 370 215-611 10-398 (400)
91 PF06609 TRI12: Fungal trichot 99.9 6.1E-21 1.3E-25 205.9 34.7 354 218-582 55-466 (599)
92 PRK09584 tppB putative tripept 99.9 1.9E-20 4E-25 204.3 38.0 389 212-606 26-477 (500)
93 KOG0569 Permease of the major 99.9 5.6E-20 1.2E-24 193.7 39.3 365 244-613 62-459 (485)
94 PF01306 LacY_symp: LacY proto 99.9 6.6E-21 1.4E-25 197.0 31.1 381 213-613 13-405 (412)
95 KOG0254 Predicted transporter 99.9 4E-20 8.6E-25 203.0 34.4 383 213-602 51-476 (513)
96 PF11700 ATG22: Vacuole efflux 99.9 5.9E-19 1.3E-23 189.3 40.3 359 243-613 71-473 (477)
97 KOG4686 Predicted sugar transp 99.9 6.7E-22 1.5E-26 187.1 14.3 389 203-610 40-445 (459)
98 KOG0253 Synaptic vesicle trans 99.9 1.8E-19 3.9E-24 176.9 30.3 389 205-609 76-520 (528)
99 TIGR01301 GPH_sucrose GPH fami 99.9 5.7E-19 1.2E-23 188.3 36.9 396 206-612 4-475 (477)
100 PTZ00207 hypothetical protein; 99.9 3.2E-19 6.9E-24 194.0 35.3 395 203-608 24-552 (591)
101 PRK09669 putative symporter Ya 99.9 2.1E-19 4.6E-24 194.0 33.1 334 229-586 32-391 (444)
102 PRK15462 dipeptide/tripeptide 99.9 1.3E-17 2.9E-22 178.6 41.7 390 209-600 11-469 (493)
103 KOG0255 Synaptic vesicle trans 99.9 1E-18 2.2E-23 192.7 33.8 332 234-582 110-467 (521)
104 TIGR00788 fbt folate/biopterin 99.8 2.7E-19 5.9E-24 193.6 27.5 381 208-602 27-437 (468)
105 TIGR01272 gluP glucose/galacto 99.8 1.3E-18 2.9E-23 177.9 29.4 278 296-597 9-304 (310)
106 KOG0252 Inorganic phosphate tr 99.8 1.5E-20 3.2E-25 190.3 14.4 395 203-608 37-498 (538)
107 KOG2563 Permease of the major 99.8 1.3E-18 2.9E-23 176.6 27.0 397 199-610 37-452 (480)
108 PRK10429 melibiose:sodium symp 99.8 8.8E-18 1.9E-22 182.7 32.1 353 219-586 18-396 (473)
109 PRK09848 glucuronide transport 99.8 1.2E-17 2.5E-22 180.7 32.6 344 220-586 21-391 (448)
110 PF13347 MFS_2: MFS/sugar tran 99.8 7E-18 1.5E-22 181.2 28.3 340 228-587 23-388 (428)
111 COG2270 Permeases of the major 99.8 1.2E-16 2.6E-21 161.8 28.8 349 242-609 58-430 (438)
112 PRK11462 putative transporter; 99.8 1.7E-15 3.7E-20 163.8 38.3 333 230-586 33-390 (460)
113 PF00083 Sugar_tr: Sugar (and 99.8 1.1E-22 2.4E-27 220.0 -20.3 391 216-612 9-440 (451)
114 PF03209 PUCC: PUCC protein; 99.8 5.8E-15 1.3E-19 150.2 34.9 361 233-610 6-400 (403)
115 COG2211 MelB Na+/melibiose sym 99.7 2E-15 4.3E-20 157.9 31.1 352 217-586 22-399 (467)
116 KOG2325 Predicted transporter/ 99.7 6.1E-16 1.3E-20 162.0 21.7 391 204-610 31-477 (488)
117 COG3104 PTR2 Dipeptide/tripept 99.7 2.9E-14 6.3E-19 147.8 30.4 399 209-607 23-486 (498)
118 PF03137 OATP: Organic Anion T 99.6 1.5E-17 3.3E-22 181.0 -0.6 375 208-583 5-514 (539)
119 KOG3626 Organic anion transpor 99.6 7.1E-14 1.5E-18 152.2 22.1 284 207-490 97-459 (735)
120 KOG2816 Predicted transporter 99.6 3.9E-13 8.4E-18 143.0 25.7 360 206-582 21-391 (463)
121 PF05631 DUF791: Protein of un 99.6 1.8E-12 3.8E-17 130.2 26.0 250 220-486 47-304 (354)
122 PF03092 BT1: BT1 family; Int 99.5 3.1E-12 6.6E-17 136.9 23.3 374 227-609 10-414 (433)
123 TIGR00889 2A0110 nucleoside tr 99.5 9.6E-13 2.1E-17 140.8 16.8 162 226-387 227-405 (418)
124 TIGR00880 2_A_01_02 Multidrug 99.5 5.1E-13 1.1E-17 118.9 11.8 134 248-383 4-137 (141)
125 TIGR00890 2A0111 Oxalate/Forma 99.5 1.1E-12 2.4E-17 137.6 16.3 150 227-376 225-374 (377)
126 PRK05122 major facilitator sup 99.4 6E-12 1.3E-16 133.9 21.2 159 226-388 235-393 (399)
127 PRK09528 lacY galactoside perm 99.4 2.9E-12 6.4E-17 137.3 15.8 151 234-386 254-405 (420)
128 PRK15011 sugar efflux transpor 99.4 1.5E-11 3.3E-16 130.5 21.0 154 226-382 235-389 (393)
129 PRK09874 drug efflux system pr 99.4 5.9E-12 1.3E-16 134.3 17.6 159 225-385 237-399 (408)
130 PRK12382 putative transporter; 99.4 1.8E-11 4E-16 129.9 20.7 153 226-382 235-387 (392)
131 PRK11551 putative 3-hydroxyphe 99.4 1.4E-11 3E-16 131.4 19.3 155 225-381 238-393 (406)
132 TIGR00902 2A0127 phenyl propri 99.4 2E-11 4.4E-16 129.1 20.0 156 220-379 218-374 (382)
133 cd06174 MFS The Major Facilita 99.4 1.9E-11 4E-16 126.8 19.4 163 217-381 185-349 (352)
134 PRK03545 putative arabinose tr 99.4 3.2E-11 6.9E-16 128.0 20.7 152 230-385 229-381 (390)
135 PRK09556 uhpT sugar phosphate 99.4 2.6E-11 5.7E-16 131.8 19.8 169 213-381 264-446 (467)
136 PRK10489 enterobactin exporter 99.4 1.2E-11 2.6E-16 132.5 16.7 158 226-385 242-400 (417)
137 TIGR01299 synapt_SV2 synaptic 99.4 3.7E-11 8.1E-16 135.2 20.9 135 245-382 598-732 (742)
138 PRK10642 proline/glycine betai 99.4 6E-11 1.3E-15 129.8 21.9 162 221-382 264-428 (490)
139 TIGR00883 2A0106 metabolite-pr 99.4 8.6E-12 1.9E-16 131.7 14.8 158 216-373 228-390 (394)
140 TIGR00899 2A0120 sugar efflux 99.4 4.7E-11 1E-15 125.7 20.3 150 229-381 221-371 (375)
141 PRK10054 putative transporter; 99.3 5.4E-11 1.2E-15 126.4 20.4 173 424-606 7-180 (395)
142 PRK03633 putative MFS family t 99.3 5E-11 1.1E-15 126.0 19.8 152 227-383 220-371 (381)
143 PF01770 Folate_carrier: Reduc 99.3 1.7E-09 3.8E-14 111.8 30.1 336 227-572 24-391 (412)
144 PRK03893 putative sialic acid 99.3 3.1E-11 6.8E-16 132.3 17.7 150 226-375 294-444 (496)
145 TIGR00893 2A0114 d-galactonate 99.3 7.8E-11 1.7E-15 124.2 19.8 165 215-380 223-395 (399)
146 PRK03699 putative transporter; 99.3 9E-11 2E-15 124.7 19.3 157 221-380 219-376 (394)
147 TIGR00879 SP MFS transporter, 99.3 4.7E-11 1E-15 129.5 17.5 179 207-385 284-471 (481)
148 PRK11273 glpT sn-glycerol-3-ph 99.3 7.6E-11 1.6E-15 127.7 18.5 163 222-384 268-435 (452)
149 TIGR00892 2A0113 monocarboxyla 99.3 2.9E-11 6.3E-16 130.9 15.0 156 221-378 255-415 (455)
150 PRK11663 regulatory protein Uh 99.3 1.5E-10 3.2E-15 124.7 19.7 164 221-384 257-424 (434)
151 PRK09705 cynX putative cyanate 99.3 3.2E-10 7E-15 120.4 21.6 163 221-386 219-383 (393)
152 COG2271 UhpC Sugar phosphate p 99.3 8.3E-11 1.8E-15 119.6 14.8 178 208-385 253-435 (448)
153 PRK15462 dipeptide/tripeptide 99.3 2.9E-10 6.2E-15 122.3 19.7 178 423-607 8-188 (493)
154 COG2814 AraJ Arabinose efflux 99.3 4.1E-10 8.9E-15 115.9 19.7 179 204-385 209-387 (394)
155 PRK11646 multidrug resistance 99.3 4.2E-10 9.1E-15 119.8 20.5 171 427-607 13-184 (400)
156 TIGR00897 2A0118 polyol permea 99.2 4.8E-10 1E-14 119.4 20.7 162 219-382 234-399 (402)
157 PF06963 FPN1: Ferroportin1 (F 99.2 2.3E-08 4.9E-13 105.4 32.1 363 210-577 5-412 (432)
158 PF07690 MFS_1: Major Facilita 99.2 3.8E-10 8.3E-15 117.3 18.8 167 430-604 2-168 (352)
159 PRK11010 ampG muropeptide tran 99.2 1.7E-09 3.7E-14 118.1 24.5 153 230-383 246-402 (491)
160 TIGR00891 2A0112 putative sial 99.2 9.9E-11 2.1E-15 124.4 14.5 139 228-368 259-400 (405)
161 PRK12307 putative sialic acid 99.2 4.3E-10 9.3E-15 120.7 19.6 143 226-368 250-392 (426)
162 TIGR00924 yjdL_sub1_fam amino 99.2 4E-10 8.6E-15 122.5 19.2 176 424-608 10-192 (475)
163 PRK11128 putative 3-phenylprop 99.2 6.2E-10 1.3E-14 117.8 20.0 146 226-375 224-370 (382)
164 PRK09584 tppB putative tripept 99.2 8.6E-10 1.9E-14 120.6 21.1 178 421-605 17-198 (500)
165 PRK10504 putative transporter; 99.2 1.1E-09 2.4E-14 119.3 21.7 176 424-608 10-185 (471)
166 PRK10077 xylE D-xylose transpo 99.2 9.5E-10 2.1E-14 120.0 20.4 164 223-386 287-459 (479)
167 PRK10207 dipeptide/tripeptide 99.2 9.5E-10 2.1E-14 119.7 20.0 178 423-607 13-193 (489)
168 TIGR00900 2A0121 H+ Antiporter 99.2 6.9E-10 1.5E-14 115.9 18.3 175 428-607 3-178 (365)
169 PRK09952 shikimate transporter 99.2 1E-09 2.3E-14 118.2 19.9 156 226-381 269-430 (438)
170 PF11700 ATG22: Vacuole efflux 99.2 1.4E-09 2.9E-14 117.3 20.4 176 206-383 280-467 (477)
171 TIGR00710 efflux_Bcr_CflA drug 99.2 1.4E-09 3E-14 114.8 19.8 169 430-608 11-180 (385)
172 TIGR00895 2A0115 benzoate tran 99.2 4.6E-10 9.9E-15 118.8 16.0 140 215-356 258-397 (398)
173 PRK14995 methyl viologen resis 99.2 2.5E-09 5.4E-14 117.2 22.2 173 426-608 8-182 (495)
174 PF05977 MFS_3: Transmembrane 99.2 7.4E-10 1.6E-14 120.6 17.6 154 226-381 237-391 (524)
175 PRK15075 citrate-proton sympor 99.2 1.6E-09 3.5E-14 116.7 19.9 145 219-363 250-398 (434)
176 TIGR00903 2A0129 major facilit 99.2 2E-09 4.3E-14 113.1 19.6 160 440-609 7-166 (368)
177 TIGR00882 2A0105 oligosacchari 99.1 1.1E-09 2.4E-14 116.4 17.5 141 238-380 250-391 (396)
178 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.3E-09 7.2E-14 113.4 20.8 158 440-607 24-188 (412)
179 PRK10091 MFS transport protein 99.1 2.6E-09 5.7E-14 113.0 19.7 173 424-606 3-176 (382)
180 TIGR00711 efflux_EmrB drug res 99.1 2.4E-09 5.3E-14 116.9 19.8 171 428-608 6-177 (485)
181 PRK11043 putative transporter; 99.1 4.6E-09 1E-13 111.8 21.4 163 438-609 17-182 (401)
182 TIGR01272 gluP glucose/galacto 99.1 4.2E-09 9E-14 107.9 19.9 158 209-371 142-302 (310)
183 KOG3762 Predicted transporter 99.1 1.7E-09 3.8E-14 112.6 16.9 181 419-609 366-548 (618)
184 TIGR02718 sider_RhtX_FptX side 99.1 1.7E-09 3.6E-14 114.8 17.5 151 228-378 229-385 (390)
185 TIGR00881 2A0104 phosphoglycer 99.1 8.9E-10 1.9E-14 115.6 15.3 146 221-366 230-379 (379)
186 PRK10473 multidrug efflux syst 99.1 6.7E-09 1.5E-13 110.2 21.6 170 428-607 7-177 (392)
187 PRK10213 nepI ribonucleoside t 99.1 6.6E-09 1.4E-13 110.4 21.4 147 230-380 240-387 (394)
188 TIGR00886 2A0108 nitrite extru 99.1 4.2E-09 9E-14 110.4 19.7 166 426-601 3-181 (366)
189 TIGR00712 glpT glycerol-3-phos 99.1 1.9E-09 4.2E-14 116.2 16.9 161 225-385 269-434 (438)
190 PRK15402 multidrug efflux syst 99.1 9.3E-09 2E-13 109.7 21.3 147 229-376 237-387 (406)
191 TIGR00769 AAA ADP/ATP carrier 99.1 5.6E-06 1.2E-10 88.5 40.7 276 207-491 7-334 (472)
192 PLN00028 nitrate transmembrane 99.1 1.3E-08 2.8E-13 110.9 21.2 158 440-608 52-219 (476)
193 PRK11902 ampG muropeptide tran 99.1 4.3E-09 9.2E-14 112.2 17.0 149 230-383 233-389 (402)
194 PF03825 Nuc_H_symport: Nucleo 99.1 1E-08 2.2E-13 108.4 19.3 166 217-383 217-394 (400)
195 PRK11195 lysophospholipid tran 99.0 6.8E-09 1.5E-13 110.3 18.1 171 424-607 3-173 (393)
196 TIGR00792 gph sugar (Glycoside 99.0 4.5E-09 9.8E-14 113.2 16.9 122 240-362 255-383 (437)
197 PF01306 LacY_symp: LacY proto 99.0 6.6E-09 1.4E-13 108.2 16.9 160 226-387 243-403 (412)
198 KOG0637 Sucrose transporter an 99.0 4E-09 8.6E-14 108.2 14.6 380 217-603 42-492 (498)
199 PF06813 Nodulin-like: Nodulin 99.0 7.7E-08 1.7E-12 93.9 23.1 152 205-359 1-157 (250)
200 PRK10406 alpha-ketoglutarate t 99.0 1.5E-08 3.3E-13 109.0 20.0 156 223-379 259-419 (432)
201 KOG0569 Permease of the major 99.0 2.9E-09 6.2E-14 113.0 13.5 187 205-392 268-462 (485)
202 PRK11652 emrD multidrug resist 99.0 2.3E-08 5E-13 106.2 20.6 166 431-606 15-181 (394)
203 PRK11102 bicyclomycin/multidru 99.0 1E-08 2.2E-13 108.1 17.6 158 440-607 7-165 (377)
204 KOG2504 Monocarboxylate transp 99.0 1E-08 2.3E-13 111.2 17.1 174 209-384 300-476 (509)
205 TIGR00887 2A0109 phosphate:H+ 99.0 1.2E-08 2.5E-13 112.2 17.3 155 226-380 307-485 (502)
206 KOG3574 Acetyl-CoA transporter 99.0 1.8E-07 3.8E-12 93.6 23.4 362 207-586 31-434 (510)
207 PRK15034 nitrate/nitrite trans 99.0 3.6E-08 7.9E-13 105.1 19.8 181 424-609 34-233 (462)
208 COG2270 Permeases of the major 99.0 1.5E-08 3.3E-13 103.5 15.9 150 230-381 276-426 (438)
209 PRK15403 multidrug efflux syst 99.0 4.2E-08 9E-13 104.9 20.3 154 443-606 35-189 (413)
210 KOG4332 Predicted sugar transp 99.0 3.9E-08 8.5E-13 93.6 17.2 359 221-603 51-426 (454)
211 TIGR00896 CynX cyanate transpo 99.0 2.9E-08 6.2E-13 103.9 18.1 135 224-361 214-350 (355)
212 TIGR00898 2A0119 cation transp 98.9 2.1E-08 4.5E-13 110.3 17.5 147 232-383 348-494 (505)
213 TIGR00885 fucP L-fucose:H+ sym 98.9 9.1E-08 2E-12 102.1 21.4 171 426-604 5-203 (410)
214 PRK08633 2-acyl-glycerophospho 98.9 2.3E-08 5E-13 121.1 18.8 144 228-373 253-399 (1146)
215 PF02487 CLN3: CLN3 protein; 98.9 7.2E-07 1.6E-11 92.6 26.5 321 244-579 61-393 (402)
216 KOG3098 Uncharacterized conser 98.9 7.7E-07 1.7E-11 93.9 27.0 317 248-579 56-410 (461)
217 PRK10133 L-fucose transporter; 98.9 6.7E-08 1.5E-12 104.1 18.8 139 234-377 287-426 (438)
218 PRK06814 acylglycerophosphoeth 98.9 3E-08 6.4E-13 120.0 17.7 150 226-375 244-413 (1140)
219 PRK09848 glucuronide transport 98.9 2.3E-08 4.9E-13 108.2 15.0 137 226-362 247-391 (448)
220 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.9E-06 4.2E-11 96.2 30.5 154 229-382 10-180 (654)
221 TIGR00894 2A0114euk Na(+)-depe 98.9 2.8E-08 6.1E-13 108.0 15.6 172 210-382 264-448 (465)
222 TIGR00806 rfc RFC reduced fola 98.9 1.2E-07 2.7E-12 99.5 19.2 158 443-611 44-206 (511)
223 COG2223 NarK Nitrate/nitrite t 98.9 7.7E-08 1.7E-12 98.3 16.7 169 434-609 23-194 (417)
224 KOG4686 Predicted sugar transp 98.8 1.3E-07 2.8E-12 91.0 15.9 134 231-368 289-426 (459)
225 KOG3762 Predicted transporter 98.8 2.8E-08 6E-13 103.8 11.1 165 217-383 381-546 (618)
226 PRK10429 melibiose:sodium symp 98.8 1.9E-07 4.2E-12 101.7 17.6 142 221-362 245-396 (473)
227 PRK09669 putative symporter Ya 98.8 1.8E-07 3.9E-12 101.0 16.7 122 241-362 263-391 (444)
228 TIGR00880 2_A_01_02 Multidrug 98.8 6.5E-08 1.4E-12 85.7 11.0 133 467-608 5-138 (141)
229 PF13347 MFS_2: MFS/sugar tran 98.8 2.3E-07 5E-12 99.7 17.1 147 216-362 234-387 (428)
230 KOG3764 Vesicular amine transp 98.7 3.9E-08 8.5E-13 99.2 9.8 145 455-608 101-247 (464)
231 KOG0253 Synaptic vesicle trans 98.7 7.3E-08 1.6E-12 96.0 11.0 132 251-386 390-521 (528)
232 TIGR00901 2A0125 AmpG-related 98.7 4E-07 8.7E-12 95.2 17.5 159 442-609 6-179 (356)
233 TIGR01301 GPH_sucrose GPH fami 98.7 5.7E-07 1.2E-11 96.6 18.3 177 425-610 5-220 (477)
234 COG2807 CynX Cyanate permease 98.7 9.9E-07 2.1E-11 88.5 18.2 160 221-383 222-384 (395)
235 COG0477 ProP Permeases of the 98.7 8E-07 1.7E-11 89.4 17.8 156 220-375 15-176 (338)
236 PTZ00207 hypothetical protein; 98.7 1.7E-06 3.7E-11 95.0 20.9 163 441-609 44-206 (591)
237 KOG1330 Sugar transporter/spin 98.6 9.6E-08 2.1E-12 98.5 8.8 152 452-612 60-213 (493)
238 KOG2532 Permease of the major 98.6 4.2E-07 9E-12 97.6 13.8 152 453-610 66-218 (466)
239 TIGR00805 oat sodium-independe 98.6 3.3E-07 7.1E-12 102.9 13.2 165 442-608 50-281 (633)
240 COG3104 PTR2 Dipeptide/tripept 98.6 5.8E-07 1.2E-11 94.1 13.7 181 423-610 20-208 (498)
241 KOG2615 Permease of the major 98.6 2.6E-07 5.7E-12 92.8 10.6 116 458-582 66-181 (451)
242 KOG3810 Micronutrient transpor 98.6 3.2E-06 7E-11 83.9 17.8 361 235-609 34-422 (433)
243 TIGR00788 fbt folate/biopterin 98.5 6.7E-07 1.5E-11 97.1 12.6 128 234-361 280-415 (468)
244 COG2211 MelB Na+/melibiose sym 98.5 3.9E-06 8.4E-11 88.6 17.1 147 215-361 244-398 (467)
245 PF03219 TLC: TLC ATP/ADP tran 98.5 0.00076 1.6E-08 72.7 34.1 279 206-492 23-351 (491)
246 PRK11462 putative transporter; 98.5 8.3E-06 1.8E-10 88.4 19.1 123 240-362 261-390 (460)
247 COG0738 FucP Fucose permease [ 98.4 7E-06 1.5E-10 83.7 16.4 160 213-377 242-402 (422)
248 PF06609 TRI12: Fungal trichot 98.4 2.4E-05 5.1E-10 85.7 20.8 153 446-609 66-218 (599)
249 COG3202 ATP/ADP translocase [E 98.3 0.01 2.2E-07 62.6 38.8 285 199-490 19-352 (509)
250 PF06779 DUF1228: Protein of u 98.2 7.5E-06 1.6E-10 65.1 8.5 75 219-293 4-78 (85)
251 PF05978 UNC-93: Ion channel r 98.2 6.1E-05 1.3E-09 68.1 15.6 109 246-357 41-149 (156)
252 PF00083 Sugar_tr: Sugar (and 98.2 1.9E-08 4.2E-13 108.8 -9.2 162 224-388 270-440 (451)
253 PF03209 PUCC: PUCC protein; 98.2 7.9E-05 1.7E-09 76.8 17.3 154 228-381 229-395 (403)
254 KOG2533 Permease of the major 98.1 3.2E-05 6.9E-10 83.5 13.6 147 453-607 74-226 (495)
255 PF12832 MFS_1_like: MFS_1 lik 98.1 2.5E-05 5.4E-10 61.6 8.7 69 214-282 7-75 (77)
256 KOG0255 Synaptic vesicle trans 98.1 3.5E-05 7.7E-10 85.1 13.4 142 454-607 112-254 (521)
257 PF05631 DUF791: Protein of un 98.1 0.0011 2.3E-08 67.5 22.3 146 454-609 63-217 (354)
258 KOG0252 Inorganic phosphate tr 98.0 6.7E-06 1.4E-10 84.9 5.9 179 207-385 304-499 (538)
259 KOG0254 Predicted transporter 98.0 0.00014 3E-09 80.1 16.6 180 208-388 296-487 (513)
260 PF06813 Nodulin-like: Nodulin 98.0 0.0002 4.2E-09 70.2 15.5 159 446-608 23-182 (250)
261 KOG1237 H+/oligopeptide sympor 97.9 0.0058 1.3E-07 67.4 27.3 155 227-381 58-242 (571)
262 PF13000 Acatn: Acetyl-coenzym 97.9 0.0028 6.1E-08 66.8 22.3 365 211-582 4-466 (544)
263 KOG1479 Nucleoside transporter 97.8 0.0037 8E-08 64.8 20.4 116 208-325 19-145 (406)
264 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.00079 1.7E-08 75.5 16.7 163 440-609 3-183 (654)
265 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00031 6.7E-09 55.3 8.9 64 429-493 5-68 (77)
266 TIGR00939 2a57 Equilibrative N 97.6 0.0093 2E-07 63.9 22.0 98 250-352 53-156 (437)
267 KOG2816 Predicted transporter 97.4 0.001 2.2E-08 71.3 11.5 124 232-358 267-391 (463)
268 PRK03612 spermidine synthase; 97.4 0.0097 2.1E-07 65.2 19.3 168 432-602 22-191 (521)
269 PF00854 PTR2: POT family; In 97.4 0.001 2.2E-08 70.0 11.4 111 273-383 2-122 (372)
270 PF07672 MFS_Mycoplasma: Mycop 97.3 0.0043 9.4E-08 60.1 12.3 239 329-581 2-266 (267)
271 PRK03612 spermidine synthase; 97.2 0.017 3.6E-07 63.4 18.2 156 219-376 26-189 (521)
272 KOG2325 Predicted transporter/ 97.2 0.005 1.1E-07 65.7 13.3 181 425-610 35-231 (488)
273 PF03092 BT1: BT1 family; Int 97.1 0.01 2.2E-07 63.7 15.4 158 446-609 11-176 (433)
274 PF02487 CLN3: CLN3 protein; 97.0 0.015 3.2E-07 60.8 14.0 110 241-356 280-394 (402)
275 KOG2563 Permease of the major 96.9 0.018 3.9E-07 60.1 14.1 130 449-584 69-203 (480)
276 KOG3880 Predicted small molecu 96.9 0.0059 1.3E-07 60.2 9.7 136 244-386 64-201 (409)
277 PF06963 FPN1: Ferroportin1 (F 96.8 0.2 4.4E-06 53.3 20.8 177 425-603 3-195 (432)
278 PF05978 UNC-93: Ion channel r 96.6 0.091 2E-06 47.5 14.7 107 466-581 43-149 (156)
279 TIGR00939 2a57 Equilibrative N 96.5 0.034 7.4E-07 59.6 13.0 109 245-354 310-429 (437)
280 TIGR00769 AAA ADP/ATP carrier 96.3 0.37 8.1E-06 52.0 19.3 148 425-581 8-189 (472)
281 PF01770 Folate_carrier: Reduc 96.2 0.22 4.8E-06 52.3 16.5 160 443-611 22-185 (412)
282 KOG3098 Uncharacterized conser 96.2 0.19 4.1E-06 53.6 16.1 105 250-355 287-410 (461)
283 KOG3097 Predicted membrane pro 96.1 1.1 2.5E-05 45.1 19.6 72 252-326 68-139 (390)
284 COG0477 ProP Permeases of the 95.9 0.53 1.2E-05 46.5 17.9 152 439-598 17-175 (338)
285 KOG2601 Iron transporter [Inor 95.0 0.47 1E-05 48.4 13.0 166 210-375 30-217 (503)
286 PF00854 PTR2: POT family; In 94.5 0.35 7.7E-06 50.8 11.7 87 523-609 35-124 (372)
287 PF03137 OATP: Organic Anion T 94.2 0.012 2.5E-07 64.9 -0.4 170 438-609 16-251 (539)
288 PF01733 Nucleoside_tran: Nucl 93.9 0.02 4.3E-07 58.6 0.6 108 246-354 186-305 (309)
289 KOG3626 Organic anion transpor 93.6 0.22 4.7E-06 55.9 8.0 168 442-611 114-346 (735)
290 PF06779 DUF1228: Protein of u 93.1 1.2 2.7E-05 35.5 9.4 52 439-491 7-58 (85)
291 KOG0637 Sucrose transporter an 92.8 0.21 4.5E-06 52.5 5.9 154 425-580 33-202 (498)
292 KOG4830 Predicted sugar transp 92.6 0.072 1.6E-06 51.3 2.1 65 415-479 192-256 (412)
293 PF01733 Nucleoside_tran: Nucl 92.0 0.05 1.1E-06 55.6 0.4 113 465-577 187-304 (309)
294 KOG1237 H+/oligopeptide sympor 91.8 6.6 0.00014 43.6 16.6 178 429-607 42-244 (571)
295 KOG1479 Nucleoside transporter 91.6 11 0.00023 39.7 16.7 178 426-607 20-203 (406)
296 COG4262 Predicted spermidine s 89.9 15 0.00032 37.6 15.1 144 455-601 38-184 (508)
297 KOG4332 Predicted sugar transp 86.2 11 0.00024 37.1 11.4 133 244-376 284-423 (454)
298 KOG3574 Acetyl-CoA transporter 84.6 16 0.00036 37.9 12.2 181 425-612 32-240 (510)
299 KOG3810 Micronutrient transpor 83.9 22 0.00047 36.6 12.6 95 245-341 274-370 (433)
300 KOG2601 Iron transporter [Inor 82.7 47 0.001 34.6 14.4 170 427-599 30-217 (503)
301 TIGR00844 c_cpa1 na(+)/h(+) an 79.3 1.3E+02 0.0028 34.8 30.8 34 340-373 108-141 (810)
302 PF13000 Acatn: Acetyl-coenzym 78.5 47 0.001 36.0 13.6 128 232-361 303-469 (544)
303 PF07672 MFS_Mycoplasma: Mycop 75.4 41 0.00089 33.1 11.3 99 245-344 144-253 (267)
304 COG4262 Predicted spermidine s 72.9 1.2E+02 0.0026 31.3 19.8 131 229-361 29-168 (508)
305 PF06912 DUF1275: Protein of u 71.5 93 0.002 29.4 17.5 35 329-363 158-192 (209)
306 PRK10263 DNA translocase FtsK; 68.8 23 0.00049 42.7 9.2 23 344-366 142-164 (1355)
307 COG1230 CzcD Co/Zn/Cd efflux s 67.7 1.3E+02 0.0029 30.2 13.2 73 210-288 28-103 (296)
308 PRK00293 dipZ thiol:disulfide 66.9 2.2E+02 0.0047 31.9 24.9 32 457-488 322-353 (571)
309 PF02990 EMP70: Endomembrane p 66.4 1E+02 0.0022 34.0 13.5 27 466-492 303-329 (521)
310 KOG3880 Predicted small molecu 65.4 23 0.00051 35.7 7.2 67 286-354 333-399 (409)
311 PRK10263 DNA translocase FtsK; 60.6 53 0.0011 39.8 10.1 37 567-603 141-177 (1355)
312 TIGR00927 2A1904 K+-dependent 58.1 53 0.0011 38.2 9.2 50 227-278 953-1002(1096)
313 PRK13108 prolipoprotein diacyl 52.0 2.5E+02 0.0054 30.3 12.8 25 453-477 46-70 (460)
314 COG5336 Uncharacterized protei 50.5 62 0.0014 26.9 6.1 25 253-277 53-78 (116)
315 PF07857 DUF1632: CEO family ( 49.5 2.7E+02 0.0058 27.4 13.5 16 439-454 193-208 (254)
316 PF03741 TerC: Integral membra 46.7 2.4E+02 0.0053 26.1 17.8 59 312-372 11-69 (183)
317 COG5336 Uncharacterized protei 44.0 68 0.0015 26.7 5.4 32 552-583 37-68 (116)
318 PF03219 TLC: TLC ATP/ADP tran 43.8 4.7E+02 0.01 28.6 30.4 52 552-603 314-365 (491)
319 PF05255 UPF0220: Uncharacteri 43.2 1.4E+02 0.003 27.3 8.0 55 326-380 15-75 (166)
320 PF11299 DUF3100: Protein of u 42.9 28 0.0006 33.4 3.5 51 301-352 175-225 (241)
321 PF07760 DUF1616: Protein of u 41.5 2.7E+02 0.0058 28.0 10.7 85 300-386 22-110 (287)
322 PRK13629 threonine/serine tran 41.4 4.8E+02 0.01 28.0 17.5 41 327-372 18-58 (443)
323 COG2119 Predicted membrane pro 40.4 3E+02 0.0065 25.6 9.5 99 188-291 85-183 (190)
324 KOG2765 Predicted membrane pro 39.9 1.7E+02 0.0037 30.3 8.7 33 245-279 189-221 (416)
325 PF02694 UPF0060: Uncharacteri 38.5 62 0.0014 26.9 4.5 52 241-292 53-104 (107)
326 COG3619 Predicted membrane pro 38.1 3.8E+02 0.0082 25.9 19.3 27 335-361 170-196 (226)
327 PF02535 Zip: ZIP Zinc transpo 38.1 4.3E+02 0.0093 26.5 15.2 28 300-327 263-291 (317)
328 PTZ00370 STEVOR; Provisional 37.2 31 0.00068 34.0 3.0 29 584-612 255-283 (296)
329 PF06638 Strabismus: Strabismu 36.8 2.4E+02 0.0052 30.5 9.5 11 296-306 180-190 (505)
330 PF11947 DUF3464: Protein of u 34.8 1.9E+02 0.0041 26.0 7.3 25 548-572 121-145 (153)
331 PRK02237 hypothetical protein; 34.6 96 0.0021 25.9 4.9 51 242-292 56-106 (109)
332 PF12805 FUSC-like: FUSC-like 31.7 2.4E+02 0.0053 28.1 8.6 17 277-293 4-20 (284)
333 PF01925 TauE: Sulfite exporte 31.4 4.7E+02 0.01 25.0 12.6 35 343-377 70-104 (240)
334 PF12805 FUSC-like: FUSC-like 31.2 2.4E+02 0.0052 28.2 8.5 11 597-607 85-95 (284)
335 COG3619 Predicted membrane pro 29.7 5.2E+02 0.011 24.9 16.0 38 560-597 171-208 (226)
336 COG2274 SunT ABC-type bacterio 29.6 8.7E+02 0.019 28.0 13.3 20 583-602 290-309 (709)
337 KOG3097 Predicted membrane pro 29.2 5.4E+02 0.012 26.6 10.2 20 471-490 69-88 (390)
338 PF06123 CreD: Inner membrane 27.8 6.5E+02 0.014 26.9 11.2 48 230-281 314-361 (430)
339 PRK11715 inner membrane protei 27.4 6.3E+02 0.014 27.1 11.0 47 230-280 320-366 (436)
340 TIGR01478 STEVOR variant surfa 26.8 68 0.0015 31.7 3.4 29 584-612 259-287 (295)
341 TIGR02230 ATPase_gene1 F0F1-AT 26.3 2.9E+02 0.0064 22.8 6.5 32 343-374 53-88 (100)
342 COG1288 Predicted membrane pro 26.2 8.3E+02 0.018 26.2 12.2 27 357-383 213-239 (481)
343 PRK11715 inner membrane protei 26.0 8.4E+02 0.018 26.2 12.1 12 483-494 320-331 (436)
344 PF06123 CreD: Inner membrane 25.9 8.4E+02 0.018 26.1 12.2 12 109-120 102-113 (430)
345 PF04226 Transgly_assoc: Trans 25.9 2.4E+02 0.0051 19.7 5.3 38 344-381 6-43 (48)
346 COG3202 ATP/ADP translocase [E 25.5 9.1E+02 0.02 26.4 29.0 53 553-605 317-370 (509)
347 PF12273 RCR: Chitin synthesis 25.4 33 0.00073 29.8 1.0 13 363-375 1-13 (130)
348 COG2233 UraA Xanthine/uracil p 25.3 8.8E+02 0.019 26.1 11.9 58 433-490 22-79 (451)
349 PF09930 DUF2162: Predicted tr 25.2 6.2E+02 0.013 24.4 13.5 37 453-492 124-160 (224)
350 PRK02237 hypothetical protein; 25.0 3.3E+02 0.0071 22.8 6.5 36 460-495 56-91 (109)
351 PF02554 CstA: Carbon starvati 24.7 8.2E+02 0.018 25.6 18.2 33 328-364 51-84 (376)
352 PF09527 ATPase_gene1: Putativ 24.6 2.7E+02 0.0058 19.9 6.2 35 250-284 8-43 (55)
353 TIGR01666 YCCS hypothetical me 24.5 5.7E+02 0.012 29.4 10.7 48 263-311 44-95 (704)
354 TIGR01667 YCCS_YHJK integral m 23.9 7.2E+02 0.016 28.6 11.4 50 262-312 43-96 (701)
355 PF11368 DUF3169: Protein of u 23.6 6.9E+02 0.015 24.3 12.2 25 332-356 9-33 (248)
356 COG1079 Uncharacterized ABC-ty 23.1 8E+02 0.017 24.9 13.8 98 253-355 18-116 (304)
357 KOG2881 Predicted membrane pro 22.4 7.6E+02 0.017 24.4 14.2 23 361-383 128-150 (294)
358 PF02632 BioY: BioY family; I 21.8 3E+02 0.0065 24.6 6.3 25 249-273 60-84 (148)
359 COG1268 BioY Uncharacterized c 20.8 3.3E+02 0.0073 25.3 6.6 23 249-271 89-111 (184)
360 TIGR00927 2A1904 K+-dependent 20.4 2.8E+02 0.0061 32.7 7.1 10 244-253 936-945 (1096)
361 PRK13108 prolipoprotein diacyl 20.1 1.1E+03 0.024 25.5 18.3 53 555-607 222-275 (460)
362 COG1288 Predicted membrane pro 20.1 1.1E+03 0.024 25.3 11.3 75 276-351 358-438 (481)
363 PF01810 LysE: LysE type trans 20.0 6.8E+02 0.015 22.9 16.7 9 481-489 158-166 (191)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=309.39 Aligned_cols=401 Identities=18% Similarity=0.230 Sum_probs=325.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
.|+.+++..++.+...++.+.+++.+.|.+.++.++|.+|+|++.+.+.+.|.++..+.|.++||.+.|..+.+++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 35678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhH--hhhhcCCC
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--PILIQKFG 361 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~--~~l~~~~g 361 (615)
+..+++++++ +.+.+.++.++.|+..|..+|++...+++|++++|||+..++++.+-++|+.+.|++. +++..+.+
T Consensus 106 i~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 106 IVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 9999999999 7888999999999999999999999999999999999999999999999999999999 89998899
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhc----CCccc--cccccccHHHHhhhhhHHHHHHHHHH
Q 007159 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILG----GSISK--EAVSVIPWKLILSKAPVWALIISHFC 435 (615)
Q Consensus 362 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~l~~~~~~~~~~l~~~~ 435 (615)
||..|++-+++++++.++.++..+++|++..-...++.+.+.. ..++. -..+..-++.+++||.+|.+++..++
T Consensus 184 w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vf 263 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVF 263 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 9999999999999999988888888877643222222111110 01111 11223456778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHH
Q 007159 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 515 (615)
Q Consensus 436 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 515 (615)
.+..=+++..|.|.|+.|..|++...++...+++=.+++.|.++.||++||+-+.|....+ ++..++.. ..+....
T Consensus 264 vYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~---~i~~~~i~-~~~~~~w 339 (448)
T COG2271 264 VYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA---LIFMLLIT-ASLVLYW 339 (448)
T ss_pred HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH---HHHHHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998633322211 11111111 1122222
Q ss_pred hccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHH-HHHHHHHHhhheeccCChhHHHHHH
Q 007159 516 LSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVL-AGVFGTAATGYILQRGSWDDVFKVA 593 (615)
Q Consensus 516 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~l-g~~igp~l~G~l~~~~g~~~~f~~~ 593 (615)
.....++. ..++++.+++...+.....-....+..|++..|++.|+...+.++ |...+....|++.|..||...|.+.
T Consensus 340 ~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~ 419 (448)
T COG2271 340 LAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVL 419 (448)
T ss_pred cCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHH
Confidence 22222233 333444444444444444444556667779999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 007159 594 VVLYIIGTLVWNLFATG 610 (615)
Q Consensus 594 ~~~~l~~~l~~~~~~~~ 610 (615)
.+.++++.++++...+.
T Consensus 420 ~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 420 SIAALLAILLLLPVWNA 436 (448)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88888887776665443
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=302.88 Aligned_cols=379 Identities=20% Similarity=0.257 Sum_probs=312.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
|..++.+.++.|..+.........+|++.+++|+|..+.|++.++|.+++.++.|+...+.||+.||++++..+.++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 56677777777888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~ 365 (615)
.+++++++ |++.+++.|++.|+..|.+++...++..++.|+++|++++++...+..++.++|.+++.++.+.+|||+.
T Consensus 92 n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~ 169 (394)
T COG2814 92 NLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRAT 169 (394)
T ss_pred HHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHH
Confidence 99999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhc-CCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 366 FYSFGSLGSIWFALWLKKAY-SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 366 f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
|++.+.+.++..+..+...| +...+.+.... +....++++|.++...+..++...+.+..+
T Consensus 170 F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~------------------~~~~~~l~~p~v~~~l~~t~l~~~g~F~~f 231 (394)
T COG2814 170 FLAIAVLALLALLLLWKLLPPSEISGSLPGPL------------------RTLLRLLRRPGVLLGLLATFLFMTGHFALY 231 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccCCCCCCcch------------------hHHHHHhcCchHHHHHHHHHHHHcchhhhH
Confidence 99999998888887777776 11111111111 022347889999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
+|+..++++..|++....++.+..++++..+|..++|++.|| +.++... ....+....... +.......+.
T Consensus 232 tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~-------~~~~l~a~~~l~-l~~~~~~~~~ 302 (394)
T COG2814 232 TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALI-------AALLLLALALLA-LTFTGASPAL 302 (394)
T ss_pred HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHH-------HHHHHHHHHHHH-HHHhcchHHH
Confidence 999999999999999999999999999999999999999999 6554322 111111111111 2222333444
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~ 604 (615)
.+...++.+...............+..|+.++.+.+++....++|..+|..++|.++|+.|+....++.+++.+++.++.
T Consensus 303 ~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~ 382 (394)
T COG2814 303 ALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLA 382 (394)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 44333333332233333333333335679999999999999999999999999999999999999999999999999888
Q ss_pred HHHhcCCcc
Q 007159 605 NLFATGERV 613 (615)
Q Consensus 605 ~~~~~~~k~ 613 (615)
+...+.+|+
T Consensus 383 ~~~~~~~~~ 391 (394)
T COG2814 383 LLSARKDRR 391 (394)
T ss_pred HHHHhcccc
Confidence 777665554
No 3
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=313.11 Aligned_cols=376 Identities=41% Similarity=0.791 Sum_probs=336.1
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcch
Q 007159 235 KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVA 314 (615)
Q Consensus 235 ~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~ 314 (615)
.+++++..+-|++.+.+..|+++++++.|++.||+|.|+++..+.++.++++++++++.+.+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999999998878788899999999999999
Q ss_pred hhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC-CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 007159 315 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE 393 (615)
Q Consensus 315 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (615)
+|+...+.++|.|++||++..++...+..+|.+++-+++|++.+. +||+++|++.++++++..++++....++|.+.+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999988888777
Q ss_pred ccHHHHhhhhcCCcccccc--ccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH
Q 007159 394 LRAEEKRHILGGSISKEAV--SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL 471 (615)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i 471 (615)
..++|.+...+++..++.. ...||+.+++++++|.+++..++..++.+.+..|.|.|+++++|++..+.|++.+++.+
T Consensus 226 is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH
Confidence 7777776665554443333 46799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHhhhhhhhhhhhhhhhhc
Q 007159 472 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TPAMAVLCMACSQGSDAFSQSGLYSNHQD 549 (615)
Q Consensus 472 ~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (615)
.+.+..+++|.++||+..|.......+++...++..+.++++..+...+ ..+..+.++.+..+..+......+....+
T Consensus 306 ~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~ 385 (466)
T KOG2532|consen 306 AMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQD 385 (466)
T ss_pred HHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhh
Confidence 9999999999999999887566666677888888888888887776554 34456666666667777777777777777
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHhhheec---cCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 550 IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 550 ~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~---~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
..|++.+..+|+.+.+..+.++++|.+.|.+.. ...|+.+|++.+++.+++.+++.++.+.
T Consensus 386 ~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 386 IAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 689999999999999999999999999999994 2479999999999999999888777443
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6.4e-35 Score=313.78 Aligned_cols=402 Identities=16% Similarity=0.179 Sum_probs=292.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
++.++..+++.++..+++...++..+|.+.+++|+|..++|++.+++.+++.+++++.|++.||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34555666777777778888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.+++++++ +++.+++.|++.|++.+...+...+++.+++++++|++++++.+.+..+|.+++|.+++++.+.+|||+
T Consensus 101 ~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 999998887 788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCcccc----HHHHhhhhcCCcccccccccc-H-HHHhhhhhHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELR----AEEKRHILGGSISKEAVSVIP-W-KLILSKAPVWALIISHFCHNW 438 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~l~~~~~~~ 438 (615)
.|++.+++.++..++.....++++++..... .++..+..+.. .+......+ + ...++++.+|.+.+..++...
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYV 257 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHH
Confidence 9998887665554444333333332110000 00000000000 000000111 1 125667888888877777777
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK--GLSITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
....+.+|+|.|+.+.+|++..+.+...+...++..+++++.|++.||+.++ +... ....++.......+...
T Consensus 258 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~-----~~~~~~~~~~~~~~~~~ 332 (434)
T PRK11663 258 VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMN-----LIFAAGILLSVGSLWLM 332 (434)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHH-----HHHHHHHHHHHHHHHHc
Confidence 7778888999999887899999999999999999999999999999999432 2211 11111111111111112
Q ss_pred ccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHH
Q 007159 517 SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVL 596 (615)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~ 596 (615)
...+........+.++.+.............+..+++.+|++.|+.+++.++|..++|++.|++.|..||..+|.+.+++
T Consensus 333 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~ 412 (434)
T PRK11663 333 PFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIA 412 (434)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHH
Confidence 22222222222222222111111111222344566789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCccC
Q 007159 597 YIIGTLVWNLFATGERVL 614 (615)
Q Consensus 597 ~l~~~l~~~~~~~~~k~~ 614 (615)
++++.++.+...|+++.+
T Consensus 413 ~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 413 AGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHHHHHhhhchh
Confidence 888877666555554443
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.6e-34 Score=306.55 Aligned_cols=375 Identities=15% Similarity=0.165 Sum_probs=285.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
+|..++.+.+..++.........+.+|.+.+++|.|..++|++.+.+.+++.+++++.|++.||+|||+++..+.++.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 35444444444444334444455678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.+++.+++ +++.+++.|+++|++.+...+...+++.+++|+++|++++++...+..+|.++||++++.+.+.+|||+
T Consensus 87 ~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 164 (390)
T PRK03545 87 SHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRT 164 (390)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHH
Confidence 999999988 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.|++.+++.++..++.....++.+++++. . ..+.++.++++.++...+..++.....+...
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPSEHSG----S---------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAY 225 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcc----h---------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 99998887766655544443332221110 0 0134557788888776666666666666677
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
+++|.|+++.+|++..+.+.+.....++.++++++.|++.||++++.... ...+.............+...+
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~ 297 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI--------AIALLLVCLLLLLPAANSEWHL 297 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH--------HHHHHHHHHHHHHHHhchHHHH
Confidence 88888988888999999999999999999999999999999998763211 1111111111111111222222
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~ 604 (615)
.+..++.+.+.....+. ......+..|+.++++.|+.+....+|..+||.++|++.|..|++..|.+.+++.+++.++.
T Consensus 298 ~~~~~l~g~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 298 SVLSIFWGIAIMCIGLA-MQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHHhcchHH-HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 33333333333222222 33333345668899999999999999999999999999999999999999999998888777
Q ss_pred HHHhc
Q 007159 605 NLFAT 609 (615)
Q Consensus 605 ~~~~~ 609 (615)
....+
T Consensus 377 ~~~~~ 381 (390)
T PRK03545 377 ILIFR 381 (390)
T ss_pred HHHcc
Confidence 66554
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.2e-35 Score=317.49 Aligned_cols=396 Identities=18% Similarity=0.186 Sum_probs=294.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
.+.++.++++.+++.+.++.++++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 46677788888888999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHHHHhh---hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-
Q 007159 285 ATVLTPVA---ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF- 360 (615)
Q Consensus 285 ~~~l~~~~---~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~- 360 (615)
+.++.++. ...+++.+++.|++.|++.+...+...+++.+|+|+++|++++|++..+..+|.++++++..++.+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 77665542 11278899999999999999999999999999999999999999999999999999999987776643
Q ss_pred --CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhh-h--hcCC-cccccccccc--HHHHhhhhhHHHHHHH
Q 007159 361 --GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH-I--LGGS-ISKEAVSVIP--WKLILSKAPVWALIIS 432 (615)
Q Consensus 361 --gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~-~~~~~~~~~~--~~~l~~~~~~~~~~l~ 432 (615)
+|+..|.+.+++.++..++.+...++.|++.+..+.++... . .... .++.+....+ .+..++++.+|...+.
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 266 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFA 266 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHH
Confidence 69999888787777666655555444433221111111000 0 0000 0000000011 2236788999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHH
Q 007159 433 HFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFF 512 (615)
Q Consensus 433 ~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 512 (615)
.++......+...|+|.|+++.+|++..+.++......++.+++.++.|+++||+++|+...... ....+ ...
T Consensus 267 ~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~-----~~~~~--~~~ 339 (467)
T PRK09556 267 NIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACI-----ALALI--IFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH-----HHHHH--HHH
Confidence 88888888888899999999989999999999999999999999999999999999886543211 11111 111
Q ss_pred HHHhccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHH-HHHHHHHHhhheec--------
Q 007159 513 LTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVL-AGVFGTAATGYILQ-------- 582 (615)
Q Consensus 513 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~l-g~~igp~l~G~l~~-------- 582 (615)
+............ +..+.++.+..+..........+..|++.+|++.|+.+.+.++ |..++|.+.|++.|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 1111122233222 3333333222222222223344667789999999999999997 77999999999999
Q ss_pred ----cCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 583 ----RGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 583 ----~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
..+|+..|.+..++++++.++.+.+
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999988888887776655
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4.2e-34 Score=310.52 Aligned_cols=409 Identities=29% Similarity=0.520 Sum_probs=313.4
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHh----------------------hcCCCchhhHHHHHHHHHHHHHH
Q 007159 201 QFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSK----------------------EFNWNSTTVGLIQSSFFWGYLLT 258 (615)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~g~s~~~~g~i~s~~~l~~~l~ 258 (615)
..+.||.+..++++++.+.+.++..++.+.+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34567888888899889999999999999888876 78999999999999999999999
Q ss_pred HHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHH
Q 007159 259 QIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV 338 (615)
Q Consensus 259 ~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 338 (615)
+++.|+++||+|+|+++..+.++.+++.+++.++...+++.+++.|+++|++.+...+....++.+++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999888876554335778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHhhhhcC-CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcC--Cccccccccc
Q 007159 339 YSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG--SISKEAVSVI 415 (615)
Q Consensus 339 ~~~~~lG~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 415 (615)
..+..+|.++++++++.+.+. .|||+.|++.+++.++..++++...++.|+++++..+++.+...+. ..........
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 999999999999999999988 4999999998888777766666655555543332222222111110 0011111234
Q ss_pred cHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHH
Q 007159 416 PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (615)
Q Consensus 416 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~ 495 (615)
+++.+++++.+|...+..++..+..+.+.+|+|.|+++.+|++..+.++..++..++..++.++.|++.||+++++....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 68889999999999999999999999999999999999999999999999999999999999999999999887654332
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHH
Q 007159 496 A-VRKIMQSIGFLGPAFFLTQLSH-VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFG 573 (615)
Q Consensus 496 ~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~ig 573 (615)
. .+.....++........+.... .......+.++.+.++..............+..|+.+|.+.|+.+....+++.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~ 412 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIA 412 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHH
Confidence 1 1122222222222222211111 2223333333333333333333333344556667899999999999999999999
Q ss_pred HHHhhheecc---CChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 574 TAATGYILQR---GSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 574 p~l~G~l~~~---~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
|.+.|++.+. .+|..+|.+.+++.+++.++.....+
T Consensus 413 p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 413 STLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 9999999875 34888999998888888777665433
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.4e-33 Score=301.14 Aligned_cols=384 Identities=19% Similarity=0.260 Sum_probs=285.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
.+|+.++.+++.+++.++++.+.+...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 35788888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-----
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----- 358 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~----- 358 (615)
++.+++++++ +++.+++.|++.|++.+...+....++.+++|+++|+++++++..+..+|.++++++++++.+
T Consensus 85 ~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 85 IASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988 788899999999999999999999999999999999999999999999999999999998864
Q ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHh---hh-h-cC-----Cc---cccccc-cccHHHHhhh
Q 007159 359 -KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR---HI-L-GG-----SI---SKEAVS-VIPWKLILSK 423 (615)
Q Consensus 359 -~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~-----~~---~~~~~~-~~~~~~l~~~ 423 (615)
..|||++|++.++..++..++.....++.|++.+...+++++ +. . +. .. .+.... ...++.++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 469999999988877766555555555555432111111110 00 0 00 00 000000 12344444 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQV-LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 502 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~-~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~ 502 (615)
+.+|...+..++.....+.+.+|+|.|+++. .|++..+.+.+.....++..++.++.|+++||+++|+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~------ 315 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTAL------ 315 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHH------
Confidence 7788888888888888889999999999873 467888889999999999999999999999999877532111
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHH-HhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhee
Q 007159 503 SIGFLGPAFFLTQLSHVRTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 581 (615)
Q Consensus 503 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~ 581 (615)
...+....+.+.. .... ....+.++.+ ..+.............+..+++.++++.|+.+...++|++++|.+.|.+.
T Consensus 316 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~ 393 (412)
T TIGR02332 316 PYLFAAAGWLLAS-ATDH-NLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILK 393 (412)
T ss_pred HHHHHHHHHHHHH-hcCC-HHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence 0111111111111 1112 2222211111 11111111111122233467799999999999999999999999999999
Q ss_pred ccC-ChhHHHHHHHHHHH
Q 007159 582 QRG-SWDDVFKVAVVLYI 598 (615)
Q Consensus 582 ~~~-g~~~~f~~~~~~~l 598 (615)
|.. +|...+.+++++.+
T Consensus 394 ~~~g~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 394 DATGSFNSGLWFVAALLV 411 (412)
T ss_pred ccCCCCchhHHHHHHHHh
Confidence 985 59999887776543
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.8e-33 Score=297.38 Aligned_cols=388 Identities=28% Similarity=0.449 Sum_probs=298.9
Q ss_pred HHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhcc
Q 007159 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~ 295 (615)
+++..++...++...|.+.+++|++..++|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-- 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-- 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--
Confidence 345567778888999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+++.+++.|++.|++.+...+....++.|++|+++|++++++......+|.++++.+++.+.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999988877766
Q ss_pred HHHHHHhhhcCCCCCCccccHHHHhhhhcC------CccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 376 WFALWLKKAYSSPKEDPELRAEEKRHILGG------SISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
..++.....++++++++...++++....+. ...+.......+++.+++++++...+..++.......+..++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 665555444444332221111111110000 01111122335677888999999988888888888899999999
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM 529 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 529 (615)
|+++.+|.+..+.+++.....++.+++.++.|++.||+++|+....... .....+.+...+..............+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFATNYVNIPYAALALV 319 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 9999899999999999999999999999999999999999862221111 111111111222222222222333333333
Q ss_pred HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC-hhHHHHHHHHHHHHHHHHHHH
Q 007159 530 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g-~~~~f~~~~~~~l~~~l~~~~ 606 (615)
.++.+..+..+.......+..+++.||++.|+.+.+..+|..++|.+.|++.|..| |...|.+.+++++++.++..+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 320 ALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 33444333444444556667788999999999999999999999999999999987 999999988888877766543
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4.4e-32 Score=287.83 Aligned_cols=367 Identities=16% Similarity=0.171 Sum_probs=269.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
.|+.++.+....+..........+.+|.+.+++|+++.++|+..+++.++..+++++.|++.||+|||++++.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 45554444444444444444555678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|.++||++++++.+.+|||+
T Consensus 98 ~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 999988887 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.|++.+++.++..++.....++.+++++. . ..+.+..+++|.++...+..++.....+...
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-~------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPSH-Q------------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFF 236 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCccccc-c------------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99988776665444443333332211100 0 0123456788888887776666666666667
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
++++.++.+.+|++....+.++...+++.+++.++.+++.||.+++ ... .......+..+.+... .......
T Consensus 237 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~------~~~~~~~~~~~~l~~~-~~~~~~~ 308 (394)
T PRK10213 237 TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALA------GAPLVLAVSALVLTLW-GSDKIVA 308 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHH------HHHHHHHHHHHHHHHH-hhhHHHH
Confidence 7764444455799999999999999999999999999999995433 111 1111111111111111 1122222
Q ss_pred HHHHHHHHhhhhhhhhhhhh-hhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQGSDAFSQSGLY-SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
....++.+.+. ....+... ...+.. +++.+++.++.....++|..+||.++|++.|..|+...+...+++.++..+
T Consensus 309 ~~~~~l~G~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 309 TGVAIIWGLTF-ALVPVGWSTWITRSL-ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHHHHHH-HhhhHHHHHHHHHHC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 33333333333 34444444 344444 566778888888888999999999999999999999888888776655443
No 11
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=295.23 Aligned_cols=402 Identities=16% Similarity=0.207 Sum_probs=279.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
++|.++..+++.....+.+...++...|.+.++ |++..+.|++.+.+.+++.++++++|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 346666666666666677777778888888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh--ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHH-HHhhhHhhhhcCC
Q 007159 284 VATVLTPVAA--RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSV-TGLAVSPILIQKF 360 (615)
Q Consensus 284 i~~~l~~~~~--~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~-ig~~l~~~l~~~~ 360 (615)
++.+++++.+ ..+++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.. ++|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 9988877653 125677899999999999999898889999999999999999999999998864 5565544443445
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcC---Ccccccccccc--HHHHhhhhhHHHHHHHHHH
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG---SISKEAVSVIP--WKLILSKAPVWALIISHFC 435 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~l~~~~~~~~~~l~~~~ 435 (615)
+||+.|++.+++.++..++.....++++++....+.++.+..... ....+..+..+ .+.+++++.+|...+..++
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 999999988877666555554444443332111111100000000 00000000111 2336778889988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHH
Q 007159 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 515 (615)
Q Consensus 436 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 515 (615)
.....+....++|.|+++..|++..+.+.+..+..++.+++.++.|+++||+++++.... ......+.........
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~----~~~~~~l~~~~~~~~~ 340 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYW 340 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchH----HHHHHHHHHHHHHHHH
Confidence 887888888999999999889999999998888899999999999999999954322110 1111111111111111
Q ss_pred hccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHH-HHHHhhheeccCChhHHHHHH
Q 007159 516 LSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF-GTAATGYILQRGSWDDVFKVA 593 (615)
Q Consensus 516 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~i-gp~l~G~l~~~~g~~~~f~~~ 593 (615)
........ ..+..+.++...............+..|++.+|++.|+.+....+|+.+ +|.+.|++.|..||+..|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~ 420 (452)
T PRK11273 341 LNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM 420 (452)
T ss_pred HhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHH
Confidence 11122222 2222222222221211111222345677899999999999998888765 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 007159 594 VVLYIIGTLVWNLFATG 610 (615)
Q Consensus 594 ~~~~l~~~l~~~~~~~~ 610 (615)
+++++++.+....+.+.
T Consensus 421 ~~~~~~~~~~~~~~~~~ 437 (452)
T PRK11273 421 IGGSILAVILLIVVMIG 437 (452)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 88888887766655443
No 12
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.7e-32 Score=291.25 Aligned_cols=375 Identities=15% Similarity=0.155 Sum_probs=281.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
+||+....+++.+++.......+++.+|.+.+++|+|..+++++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34667777777888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCCc
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGW 362 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~gw 362 (615)
++.+++++++ +++.+++.|++.|++.+...+...+++.+++|+++|+++++.......+|..++|.+.+.+.. ..||
T Consensus 84 i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 9999888887 788899999999999999999999999999998999999999988889999999999887764 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
|+.|++.+++.++..++.+.... |+.+++..+ +.. .. .+ ...++.++.+.+..++.....+.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~--p~~~~~~~~-~~~--------~~------~~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFSEF--PALGKHAPK-ADK--------PV------AK-EKWGIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--ccccccCcc-ccC--------cc------cc-ccCChHHHHHHHHHHHHHHHHHH
Confidence 99999888776665544433221 111111000 000 00 00 01234566666777777777788
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
+..|+|.|+++.+|++..+.+.+.+...++..+++++.|++.||+++|+..... .........+... ..+..
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~-------~~~~~~~~~~~~~-~~~~~ 295 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVL-------AGLALVLMYLFVN-TDDPS 295 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHH-------HHHHHHHHHHHHH-cCCch
Confidence 889999999988999999999999999999999999999999999998654321 1111111111111 22223
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 523 AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
...+..+..+.+..... +.......+..++.++...|.......+|..++|.+.|++.|..|++..+++.+++++++.+
T Consensus 296 ~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 296 HLLYAILGLGFFSSAIY-TTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 33333333333333332 22333333444556678889999999999999999999999999999999888888877765
Q ss_pred HHHHH
Q 007159 603 VWNLF 607 (615)
Q Consensus 603 ~~~~~ 607 (615)
+....
T Consensus 375 ~~~~~ 379 (394)
T PRK03699 375 MCILL 379 (394)
T ss_pred HHHHH
Confidence 54443
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.9e-32 Score=288.39 Aligned_cols=383 Identities=19% Similarity=0.235 Sum_probs=283.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
+++|.++.+++...+..+++....++..|.+.+++|+++.++|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 46788888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
.++.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+|
T Consensus 91 ~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 99888888887 7888999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhh---hhhHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILS---KAPVWALIISHFCHNWG 439 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~~~~~~~~ 439 (615)
++.|++.+++.++..++.....+++++..++...++.+ + ...+..++ .+..+.+.+..++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR---------A----PVLRALFGEGRATATLLLWISYFFTLIV 235 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh---------h----hhHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999877665555444444334332211110000000 0 01111111 22333344444444555
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
.+....++|.|+++ .|++..+.+.......++.++++++.|++.||+++++.... ........+..+.. ..
T Consensus 236 ~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-------~~~~~~~~~~~~~~-~~ 306 (406)
T PRK11551 236 LYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLL-------IYAGILASLAALAA-AP 306 (406)
T ss_pred HHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------HHHHHHHHHHHHHh-cC
Confidence 66777889999987 69999999999999999999999999999999998854321 11111111111111 12
Q ss_pred cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHH
Q 007159 520 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYI 598 (615)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l 598 (615)
+...+.+..++.+.+.....+.......+..++++||++.|+.+.+..+|..++|.+.|++.+. .++...+.....+.+
T Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~ 386 (406)
T PRK11551 307 SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVIL 386 (406)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHH
Confidence 2222223333333333333333334455667889999999999999999999999999999987 456666766666666
Q ss_pred HHHHHHHHHhc
Q 007159 599 IGTLVWNLFAT 609 (615)
Q Consensus 599 ~~~l~~~~~~~ 609 (615)
++.++.+...+
T Consensus 387 ~~~~~~~~~~~ 397 (406)
T PRK11551 387 VAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHhc
Confidence 66555554433
No 14
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4e-32 Score=288.19 Aligned_cols=375 Identities=13% Similarity=0.154 Sum_probs=278.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
..|.....+++..+.... ....++.+|.+.+++|+|..++|++.+++.+++.+++++.|++.||+|||+++..+.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred hHHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 345555555554444322 2557789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-Cc
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GW 362 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~-gw 362 (615)
++.+++++++ +++.+++.|+++|++.+...+....++.++++ ++|+++++++..+..+|..+|+.+++++.++. +|
T Consensus 86 ~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w 162 (393)
T PRK09705 86 VGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW 162 (393)
T ss_pred HHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 9999999998 78889999999999999999999999999996 88999999999999999999999999988875 89
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
|+.+.+.++..++....++...++.++++++.+ . ..++.+++++.|.+.+..++....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~------~~~~~l~~~~~~~l~~~~~~~~~~~~~ 223 (393)
T PRK09705 163 YQTLAWWALPAVVALFAWWWQSAREVASSHKTT-------------T------TPVRVVFTPRAWTLGVYFGLINGGYAS 223 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC-------------c------CCcccccCHhHHHHHHHHHHHHHHHHH
Confidence 998876665544433333332222221110000 0 012234567777777777777778888
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
..+++|.|+++ +|++..+.+.+.++..++.++++++.+++.||+++++....+ ..+...+............
T Consensus 224 ~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~ 295 (393)
T PRK09705 224 LIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLA-------LVLQLVGFCGFIWLPLQLP 295 (393)
T ss_pred HHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHH-------HHHHHHHHHHHHHccchHH
Confidence 88999999987 799999999999999999999999999999999988543322 1111111111111111112
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccC-cchhhHHHHHHHHHHHHHHHHHHHHhhheeccC-ChhHHHHHHHHHHHHH
Q 007159 523 AMAVLCMACSQGSDAFSQSGLYSNHQDIG-PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYIIG 600 (615)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~-g~~~~f~~~~~~~l~~ 600 (615)
... ..+.+.+.....+.......+..+ ++++|+..|+.+....++..++|.+.|++.|.. +|...|.+.+++++++
T Consensus 296 ~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (393)
T PRK09705 296 VLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGL 373 (393)
T ss_pred HHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 211 122233333333333334445554 478999999999999999999999999999985 4888888888888877
Q ss_pred HHHHHHHhcCC
Q 007159 601 TLVWNLFATGE 611 (615)
Q Consensus 601 ~l~~~~~~~~~ 611 (615)
.++...+.+++
T Consensus 374 ~~~~~~~~~~~ 384 (393)
T PRK09705 374 MIITLRFAPAR 384 (393)
T ss_pred HHHHHHhcccc
Confidence 77666655444
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.6e-31 Score=290.36 Aligned_cols=392 Identities=14% Similarity=0.115 Sum_probs=275.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
++++.+...+...+........+.+..|.+.+++|++..+++++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34455555556666666667778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-----
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----- 358 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~----- 358 (615)
++.+++++++ +++.++++|++.|++.+.. .....++.+++|+++|++++++......+|..+++.+.+.+..
T Consensus 113 ~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 113 PAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998888887 7888889999999998865 4456788999999999999999987777777777666654421
Q ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHH
Q 007159 359 ----KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHF 434 (615)
Q Consensus 359 ----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 434 (615)
..|||+.|++.+++.++..++.+...++.|+.. ..+.+++ .. .++......++..++++++|.+.+..+
T Consensus 190 ~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (476)
T PLN00028 190 GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--YRELKKS----GT-MPKDSFSKVLRYGVTNYRTWILALTYG 262 (476)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--hhhHHhc----Cc-cccccHHHHHHHHHcCchhHHHHHHHH
Confidence 258999999988887776666555544433221 0000000 00 000011123455677888888777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHH
Q 007159 435 CHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT 514 (615)
Q Consensus 435 ~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 514 (615)
+.......+..++|.|+.+.+|++...++.+.++..++.+++++++|+++||+++|+.... +.....+...+.++.+.
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~ 340 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCI 340 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHH
Confidence 6655666777889999988889999999999999999999999999999999987632211 11111122222222112
Q ss_pred HhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHH
Q 007159 515 QLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV 594 (615)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~ 594 (615)
...........+..+++.................++.++++|++.|+.+....+|..++|.+.+ ..+..+|...|.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 341 WLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMG 419 (476)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHH
Confidence 2222222222222222222211122222333444567789999999998888888888887765 223467999999999
Q ss_pred HHHHHHHHHHHHHh
Q 007159 595 VLYIIGTLVWNLFA 608 (615)
Q Consensus 595 ~~~l~~~l~~~~~~ 608 (615)
++.+++.++.++.+
T Consensus 420 ~~~~i~~~~~~~~~ 433 (476)
T PLN00028 420 VMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHhee
Confidence 98888888776664
No 16
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.3e-31 Score=298.88 Aligned_cols=392 Identities=15% Similarity=0.142 Sum_probs=273.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
+..|.++++++++.+..+++...++..+|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 44677777778888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC---
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--- 359 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~--- 359 (615)
+++.+++++++ +++.++++|++.|++.+...+...+++.+++|+++|++.++++..+..+|.++++.++..+...
T Consensus 243 ~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 243 GFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999998887 7888999999999999999999999999999999999999999999999999999887766543
Q ss_pred ----------CCchHHHHHHHHHHHHHHHHHHhhhcCCCCC---CccccHHH--Hhhhh---------------------
Q 007159 360 ----------FGWPSVFYSFGSLGSIWFALWLKKAYSSPKE---DPELRAEE--KRHIL--------------------- 403 (615)
Q Consensus 360 ----------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~--------------------- 403 (615)
.+||+.+++.++..++.++ ..+..++.|.- +.+..+.. .+...
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~ll-~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAIG-ALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 3588888776665444433 33333443321 00000000 00000
Q ss_pred ---cCC-cc--ccccc----------------cccHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 007159 404 ---GGS-IS--KEAVS----------------VIPWKLILSK---APVWALIISHFCHNWGTFILLTWMPTYYNQV---- 454 (615)
Q Consensus 404 ---~~~-~~--~~~~~----------------~~~~~~l~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~---- 454 (615)
... .. ..... +..++.+++. +..+.+++..++..++++++..|+|.++.+.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~ 479 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADD 479 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 00000 0123333333 2346677778888899999999999876541
Q ss_pred h-----------------CCCh----------------------------------------------------------
Q 007159 455 L-----------------KFNL---------------------------------------------------------- 459 (615)
Q Consensus 455 ~-----------------g~s~---------------------------------------------------------- 459 (615)
+ +++.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 559 (742)
T TIGR01299 480 YAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENT 559 (742)
T ss_pred HHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcccc
Confidence 0 0000
Q ss_pred -----------------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH
Q 007159 460 -----------------------------------TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 504 (615)
Q Consensus 460 -----------------------------------~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~ 504 (615)
....+...+..++.+++.++.|++.||+|||+.+..+
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~-------- 631 (742)
T TIGR01299 560 DFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGS-------- 631 (742)
T ss_pred chhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH--------
Confidence 0123345566788899999999999999999654321
Q ss_pred HHHHHHHHHHHhcccc-chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 505 GFLGPAFFLTQLSHVR-TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 505 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
+++.+++.+.+.... ...+++..++++++..+..........+.+|++.|++++|+.++...+|.+++|+++|.+.+.
T Consensus 632 -~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 632 -MVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred -HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112221111111122 222333333333333333333333455667779999999999999999999999999998875
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHH
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+...+|++++++.++++++.+++
T Consensus 711 -~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 711 -TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhC
Confidence 45677777777777766665554
No 17
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.3e-31 Score=292.65 Aligned_cols=370 Identities=15% Similarity=0.159 Sum_probs=282.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
|+|.+++.+++..+...++.++++.++|.+.+++|.+..+++|+.+.|.+++.++.+++|+++||+|||++++.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45778888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcc-cccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
++.+++++++ +++.++++|+++|++.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.+++||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999988 8899999999999999999998888887776 678999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc-ccHHHH--------------hhhhcCC---------------------
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPE-LRAEEK--------------RHILGGS--------------------- 406 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~--------------------- 406 (615)
||.|++...+.++..++.....+++++++.+ .+.... .......
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999988777666655555544443322111 110000 0000000
Q ss_pred --ccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 407 --ISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIA 484 (615)
Q Consensus 407 --~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~ 484 (615)
..+......+ ..+++++.++...+..++.....++...++|.|++..+|+++.++|+......++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011112 2467788887777777777777788888999999999999999999999999999999999999999
Q ss_pred HHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHH
Q 007159 485 DTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN 563 (615)
Q Consensus 485 dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~ 563 (615)
||+++|+....+. .+..++.. .+......... ......++.+.+.+....+.........+++++|.+.++.+
T Consensus 320 ~r~g~~~~~~~g~--~~~~~~~~----~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (495)
T PRK14995 320 SRLGLRLVATGGM--ALSALSFY----GLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIET 393 (495)
T ss_pred HHcCchHHHHHHH--HHHHHHHH----HHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHH
Confidence 9999875432211 11111111 11111122222 23333444454544444455555667788899999999999
Q ss_pred HHHHHHHHHHHHHhhheec
Q 007159 564 TAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 564 ~~~~lg~~igp~l~G~l~~ 582 (615)
+...+|+.+|+.+.|.+.+
T Consensus 394 ~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 394 MAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998864
No 18
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.2e-31 Score=281.64 Aligned_cols=372 Identities=16% Similarity=0.174 Sum_probs=272.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
+.......+..........+.+|.+.+++|++..++|++.+.+.+++.++++++|++.||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34444555666677778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHH
Q 007159 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (615)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~ 368 (615)
+++++ +++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..+||.+++++.+..|||+.|++
T Consensus 85 ~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 99988 8899999999999999998898899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
.+++.++..+......++.+++.+ ...+ ..+ +.++++..|...+..++.....+...++++
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~-~~~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAK-GGLR-----------------EQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIK 223 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCcccc-cCHH-----------------HHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888766655544444443322111 0000 011 245666666666555555555556667788
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC 528 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 528 (615)
.|+.+.+|+++.+.+++.+...++.++++++.+++.||+++++...... .+......+............+..
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~ 296 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTD-------FIIVLALLMLFFFGGMKTASLIFA 296 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHH-------HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8888878999999999999999999999999999999999886443211 111111111111111222222222
Q ss_pred HHHHhhhhhhhhhhhhhhhhc-cCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHHHHHHHH
Q 007159 529 MACSQGSDAFSQSGLYSNHQD-IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
++.+.+.....++......+. .+++..+.+ ..+....+|..+||.+.|++.|. .+|+..+.+.++++++.......
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 297 FICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 233333333333322223333 334555554 34677899999999999999995 78999999988777776655544
Q ss_pred HhcC
Q 007159 607 FATG 610 (615)
Q Consensus 607 ~~~~ 610 (615)
..++
T Consensus 375 ~~~~ 378 (382)
T PRK10091 375 YGRY 378 (382)
T ss_pred Hhhh
Confidence 4433
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=8.4e-31 Score=279.53 Aligned_cols=384 Identities=14% Similarity=0.095 Sum_probs=282.6
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
++.+...+.+.+..+...+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||++++.+.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 44566667777777777788888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
+++.+++.+++ +++.+++.|++.|++.+...+...+.+.|++|+++|.+++++......+|..+||.+++.+.+..+|
T Consensus 89 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 89 ILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 99988888887 7888999999999999998899999999999999999999999888889999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
|+.|++.+++.++..+......++.+++.++..+.+ ....+++.++++|.++...+..++.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLK-------------ELGRDYKLVLKNRRFVAGALALGLVSLPLLA 233 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHH-------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 999998887776665544444333322111110000 0112456778899888887777666666666
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
..++.|.|+.+.+|+++.+.+.......++.+++.++.+++.||+++++....+. ....++....... ........
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~--~~~~~g~~~~~~~--~~~~~~~~ 309 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGL--WPMVAGLLLAALA--TVISSHAY 309 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH--HHHHHHHHHHHHH--HHcccccH
Confidence 6777899988889999999998888888888999999999999999886443221 1111111111111 10112222
Q ss_pred -HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHH
Q 007159 523 -AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 523 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~ 601 (615)
+..+...+.+.+..... +..........++++|++.++.+....++..+|+.+.|.+.+..+........+++.++..
T Consensus 310 ~~~~~~~~~~g~g~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 388 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLAN-AGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWL 388 (406)
T ss_pred HHHHHHHHHHHHHHHHHh-hhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 22233333333332222 2222233344568999999999999999999999999999998775555444444444443
Q ss_pred HHHHH
Q 007159 602 LVWNL 606 (615)
Q Consensus 602 l~~~~ 606 (615)
++...
T Consensus 389 ~~~~~ 393 (406)
T PRK15402 389 LLVRI 393 (406)
T ss_pred HHHHH
Confidence 33333
No 20
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.7e-31 Score=283.64 Aligned_cols=388 Identities=14% Similarity=0.125 Sum_probs=265.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcC---CCchhhHHH---HHHHHHHHHHHHHhhHHhhhhcCCchHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFN---WNSTTVGLI---QSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g---~s~~~~g~i---~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~ 277 (615)
+++..+..+++..++.+++...++...|.+.++++ .+..+.+.+ ++..+++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 34556667777888889999999999999999984 555544444 444455555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccC------hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhh
Q 007159 278 GVIWWSVATVLTPVAARIG------LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (615)
Q Consensus 278 ~~~l~~i~~~l~~~~~~~~------~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~ 351 (615)
+.++++++.+++++++++. ...++++|+++|++.|..++...+++.|++|+++|+++.++...+...|.+++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887321 2358899999999999999999999999999999999999988888888888887
Q ss_pred hHhhhh--------cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhh
Q 007159 352 VSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK 423 (615)
Q Consensus 352 l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 423 (615)
+...+. ..+|||+.|++.+++.++... +....++.++ .+. +.. + +..++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~----~~~-~~~--------~---~~~~~~~l~~~ 241 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQ----QET-RAL--------K---EAGSLKGLWRN 241 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCch----HHH-hhh--------c---ccccHHHHHhh
Confidence 665543 257999999976665544322 2111222111 000 000 0 01256778888
Q ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHH
Q 007159 424 APVWALIISHFCH-NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 502 (615)
Q Consensus 424 ~~~~~~~l~~~~~-~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~ 502 (615)
++.+.+.+..++. ....+.+.+|+|.|+++.+|++..+.+...++..+...++..+.|+++||+++|+...... .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~----~ 317 (432)
T PRK10406 242 RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFG----S 317 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH----H
Confidence 8887766655443 5667788899999998888999989998888888888888999999999999886432111 0
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhh-hhhhhhhccCcchhhHHHHHHHHHHHH-HHHHHHHHhhhe
Q 007159 503 SIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQS-GLYSNHQDIGPRYAGVLLGLSNTAGVL-AGVFGTAATGYI 580 (615)
Q Consensus 503 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~gl~~~~~~l-g~~igp~l~G~l 580 (615)
........+ +............+.+..+..+....... ......+..|++.|+++.|+.+.+.++ .+...|.+.+.+
T Consensus 318 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 318 LAALFTVPI-LSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred HHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 011111111 11111122222222222222222222222 223345667789999999999887665 355578888866
Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 007159 581 LQRGSWDDVFKVAVVLYIIGTLVWNLFATGERV 613 (615)
Q Consensus 581 ~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~~k~ 613 (615)
.+.+.+...+++.+++.+++.+..+++.++.|.
T Consensus 397 ~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 397 KSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKG 429 (432)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 434446667777777777777666666655554
No 21
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=6.3e-32 Score=284.09 Aligned_cols=372 Identities=18% Similarity=0.185 Sum_probs=274.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
|+.++......+.. .....+++..|.+.+++|+|..++|++.+++.+++.++++++|+++||+|||+++..+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 3 WYVLVGTVIMCFTS-GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred EEEeHHHHHHHHHh-hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 44444444444433 34666788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~ 365 (615)
.+++++++ +++.+++.|++.|++.+...+.....+.++++ ++|++++++...+..+|..+++++.+.+.+..|||+.
T Consensus 82 ~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (377)
T TIGR00890 82 FTFYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAA 158 (377)
T ss_pred HHHHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHH
Confidence 99999988 78889999999999999888888888999985 6899999999999999998877777777788899999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007159 366 FYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 445 (615)
Q Consensus 366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 445 (615)
|++.+++.++..+..+...+++++++.+.+.+. ..+....++.++++.++.+.+..++..........
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (377)
T TIGR00890 159 FIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEV------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIG 226 (377)
T ss_pred HHHHHHHHHHHHHHHHHheecCchhccccCccc------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHH
Confidence 999888877766655544443322111100000 00012345677888888777766666666666666
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 525 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 525 (615)
+.+.|.++ +|.+..+.+.+.+...++..+++++.|++.||+++|+...... .....................
T Consensus 227 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 298 (377)
T TIGR00890 227 LYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVF-------GISAVGMAAMLFIPMLNDVLF 298 (377)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-------HHHHHHHHHHHHcccchhHHH
Confidence 77777655 7899888999999999999999999999999999886543211 111111111111111111111
Q ss_pred -HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHH
Q 007159 526 -VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 526 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~ 601 (615)
......+.+.............+..++++++++.|+.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.
T Consensus 299 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 299 LATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 2222222222222222233445567789999999999999999999999999999999999999999888777654
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.4e-31 Score=276.58 Aligned_cols=359 Identities=14% Similarity=0.061 Sum_probs=258.1
Q ss_pred HhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChH
Q 007159 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP 298 (615)
Q Consensus 219 ~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~ 298 (615)
+......+++.+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.+.....+ +++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHH
Confidence 345566788999999999999999999999999999999999999999999999887665555544433222224 788
Q ss_pred HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHH
Q 007159 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (615)
Q Consensus 299 ~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 378 (615)
.+++.|++.|++.+. .+.....+++++|+++|++++++...+..+|.++++++++++.+.+|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 5566667799999999999999999999999999999999999999999999998888777766
Q ss_pred HHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 007159 379 LWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (615)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s 458 (615)
++....+++|++.++..+.+ ....++++++++|.+|.+.+..++.....+.+.+|+|.|+++ .|++
T Consensus 160 ~~~~~lp~~p~~~~~~~~~~-------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s 225 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGFK-------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLE 225 (368)
T ss_pred HHHHHcCCCCCCCCCCcchH-------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
Confidence 66666665543321110000 001246778999999999999999999999999999999977 6888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhh
Q 007159 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAF 538 (615)
Q Consensus 459 ~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (615)
.. .+....+..+.+.++ .+++.||..|++..... ..... +..+..+............+.+..+.+.+...
T Consensus 226 ~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~---~~~~~--~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 296 (368)
T TIGR00903 226 DI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIY---IRAAA--LLIAAFFLALAFELNRLALFAFIGIAGLLMLP 296 (368)
T ss_pred hH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHH---HHHHH--HHHHHHHHHHHHccccHHHHHHHHHHHHhhhh
Confidence 65 566655555555555 47788887654211100 00001 11111111111112222223233322222222
Q ss_pred hhhhhh-hhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 539 SQSGLY-SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 539 ~~~~~~-~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
..+... ...+..|++.||++.|+.+...++++.++|++.+.+.. +....|.+.++..+++.+..+
T Consensus 297 ~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 297 AYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 222233 34556777899999999999999999999999998874 788888888888888777754
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3e-31 Score=282.24 Aligned_cols=380 Identities=15% Similarity=0.176 Sum_probs=269.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
+++|+.+..+++.++...++...+++..|.+.+++|++..++|++.+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45688888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g- 361 (615)
+++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 88 SAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999988887 788899999999999999999999999999999999999999999999999999999999888766
Q ss_pred -chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccH-HHHhh----hhcCCccccc-cc--cccHHHH-hhhhh-HHHHH
Q 007159 362 -WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-EEKRH----ILGGSISKEA-VS--VIPWKLI-LSKAP-VWALI 430 (615)
Q Consensus 362 -w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~-~~--~~~~~~l-~~~~~-~~~~~ 430 (615)
||+.|++.++..++..+ .....++++...++.+. +...+ ..+.....+. .+ ....+.. .+.+. +..+.
T Consensus 166 ~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (405)
T TIGR00891 166 GWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLV 244 (405)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHH
Confidence 99999875544443332 22223332211110000 00000 0000000000 00 0000000 01111 22223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Q 007159 431 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPA 510 (615)
Q Consensus 431 l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 510 (615)
+...+..........++|.|+.+.+|++..+.+.+.+...++.++++++.+++.||+++|+...... ... ....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~-----~~~-~~~~ 318 (405)
T TIGR00891 245 VLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSL-----LAG-QLLI 318 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHH-----HHH-HHHH
Confidence 3333334444566678899998889999999999999999999999999999999999986543221 011 0111
Q ss_pred HHHHHhccccchHH-HHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC-hhH
Q 007159 511 FFLTQLSHVRTPAM-AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDD 588 (615)
Q Consensus 511 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g-~~~ 588 (615)
..+.. .....+. .+...+.+.+.............+..+++.+|++.|+.+.+..+|..++|++.|++.|..| |+.
T Consensus 319 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~ 396 (405)
T TIGR00891 319 IPVFA--IGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGT 396 (405)
T ss_pred HHHHH--hCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 11111 1222222 2222333333333333333345566778999999999999999999999999999999877 776
Q ss_pred HHHHH
Q 007159 589 VFKVA 593 (615)
Q Consensus 589 ~f~~~ 593 (615)
++...
T Consensus 397 ~~~~~ 401 (405)
T TIGR00891 397 ALASL 401 (405)
T ss_pred hHHhh
Confidence 66543
No 24
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=4.5e-31 Score=284.35 Aligned_cols=404 Identities=18% Similarity=0.238 Sum_probs=284.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
+|..+..+.+.+...+.+...+....|.+.+ +|++..+.+++.+++.++..++.++.|+++||+|||+++..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4566666666677777777777777777765 599999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhhc--cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCC
Q 007159 285 ATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFG 361 (615)
Q Consensus 285 ~~~l~~~~~~--~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~g 361 (615)
+.+++++.+. .+++.+.+.|++.|++.+...+.....+.+++|+++|++++++.+.+..+|..+++.+.+.+.. ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 8887765431 2566778899999999999999999999999999999999999999999999999887765443 579
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhh----cCCcccc-ccccccHHHHhhhhhHHHHHHHHHHH
Q 007159 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL----GGSISKE-AVSVIPWKLILSKAPVWALIISHFCH 436 (615)
Q Consensus 362 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~l~~~~~~~~~~l~~~~~ 436 (615)
||+.|++.+++.++..++.+...++++++.+..+.++.+... ....+.+ ..+....+.+++++.+|...+..++.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH
Confidence 999999888877665555444444433221100000000000 0000000 00001123467888888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 437 NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 437 ~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
....+...+++|.|+++..|+++.+.+++..+..++.+++.++.|++.||+++++....+. ..... ..........
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~--~~~~~--~~~~~~~~~~ 339 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGV--FFMTL--VTIAVIVYWM 339 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHH--HHHHH--HHHHHHHHHh
Confidence 7777888899999999988999999999999999999999999999999997554322111 11111 1111111111
Q ss_pred ccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHH-HHHHHHhhheeccCChhHHHHHHH
Q 007159 517 SHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAG-VFGTAATGYILQRGSWDDVFKVAV 594 (615)
Q Consensus 517 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~-~igp~l~G~l~~~~g~~~~f~~~~ 594 (615)
......+.. +..+..+.+..+..........+..+++.+|++.|+.+....+|+ .++|.+.|.+.|..||..++.+..
T Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~ 419 (438)
T TIGR00712 340 NPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 419 (438)
T ss_pred cCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHH
Confidence 111122222 222222221111111111223455677899999999999888875 689999999999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCcc
Q 007159 595 VLYIIGTLVWNLFATGERV 613 (615)
Q Consensus 595 ~~~l~~~l~~~~~~~~~k~ 613 (615)
++.+++.+..+++.+++|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 420 GGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHHHHHHhhccC
Confidence 8888888888887777764
No 25
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.5e-30 Score=273.10 Aligned_cols=387 Identities=14% Similarity=0.135 Sum_probs=278.1
Q ss_pred CcccccCchh--HHHHHHHHHHHHHHhhhhhHHHHhHHHHHh-hcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCc
Q 007159 196 SPWWEQFPKR--WVVVLLCFSAFLLCNMDRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK 272 (615)
Q Consensus 196 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk 272 (615)
+..|+...|+ ++.+.+..+.+++.+.....+++..+.+.+ ++|+|..|.+++.+++.+++.++.++.|++.||+|.|
T Consensus 21 ~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R 100 (462)
T PRK15034 21 PAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR 100 (462)
T ss_pred hHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3345444333 567888888888889999999999988866 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhh---ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007159 273 PVLGFGVIWWSVATVLTPVAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (615)
Q Consensus 273 ~~l~~~~~l~~i~~~l~~~~~---~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig 349 (615)
+++.++.++.++..++++++. ..+++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..++
T Consensus 101 ~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 101 RWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 999999999999999888761 12789999999999998 67889999999999999999999999977777777766
Q ss_pred hhhHhhhh-----c-------------CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccc
Q 007159 350 LAVSPILI-----Q-------------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEA 411 (615)
Q Consensus 350 ~~l~~~l~-----~-------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (615)
+++.+.++ + ..+|+.++++..++.++..++.++..++.++.+. ..
T Consensus 180 ~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~--~~--------------- 242 (462)
T PRK15034 180 QLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA--SI--------------- 242 (462)
T ss_pred HHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc--CH---------------
Confidence 66655433 2 2336777777666666555555544333322111 00
Q ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007159 412 VSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (615)
Q Consensus 412 ~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~ 491 (615)
..++.++|+|..|.+.+.+++.+.++.++..++|.|+++.+ +.........+..+...+.++++|+++||+|+++
T Consensus 243 ---~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 243 ---ADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred ---HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 13455789999999999999988888888889999998855 3333333344556778889999999999999997
Q ss_pred ccHHHHHHHHHHHHHHHHH-HHHHHhccc--cchHHHHHHHHHHhhhhhhhhhhhhhh-hhccCc---------------
Q 007159 492 LSITAVRKIMQSIGFLGPA-FFLTQLSHV--RTPAMAVLCMACSQGSDAFSQSGLYSN-HQDIGP--------------- 552 (615)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------- 552 (615)
+..... +...+.. ......... .........++..+...++.....+.. .+..++
T Consensus 318 vl~~~~------i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 318 VTLINF------IFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHH------HHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhH
Confidence 554322 1111111 111111111 122333333333223333333333322 222221
Q ss_pred ------chhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHHHHHHHHHhcCC
Q 007159 553 ------RYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATGE 611 (615)
Q Consensus 553 ------~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~~l~~~~~~~~~ 611 (615)
++.|.+.|+...++.+|+++.|.+.|...+. +++...|+...+.++++.++.++...++
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2688999999999999999999999998887 6799999999999988887766654443
No 26
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=3.4e-30 Score=274.43 Aligned_cols=382 Identities=13% Similarity=0.105 Sum_probs=271.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
.+....++.++...........++.+.+++|.+..+.|++.+.+.+++.++.++.|++.||+|||+++..+.++.+++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~ 93 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHA 93 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 33444444444444444455566777789999999999999999999999999999999999999999999999988876
Q ss_pred HHHh-hh-ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHH-HHHhhhHhhhhcCCCchH
Q 007159 288 LTPV-AA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGS-VTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 288 l~~~-~~-~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~-~ig~~l~~~l~~~~gw~~ 364 (615)
++.. .. ..+++.+++.|++.|++.+...+...+.+.+++++++|++++|+...+.++|. ++||++++++.+.+||+.
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~ 173 (402)
T TIGR00897 94 AFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMN 173 (402)
T ss_pred HHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHH
Confidence 5432 11 12677788999999999988888888889999999999999999999999997 689999999998889766
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.+|.......+..++.....++.++++++.++++. ......++.++++|.++...+..++.....+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 174 TLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKF-----------SELGKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCcccccCCcch-----------hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 65544333332222222222222111110000000 0001235667889999888888888778888888
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh--ccccch
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL--SHVRTP 522 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 522 (615)
++.|.|+++ +|++..+.+.+.....++..++.++.|++.||+++|+.... ...+...+....+... ...+..
T Consensus 243 ~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-----~~~l~~~~~~~~l~~~~~~~~~~~ 316 (402)
T TIGR00897 243 VFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRW-----FGGVGCGIFTLALYYIPQHFGHSF 316 (402)
T ss_pred HHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH-----HHHHHHHHHHHHHHHHHHccCCcH
Confidence 999999876 89999999998899999999999999999999998764321 1111111111111111 111222
Q ss_pred H-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHH
Q 007159 523 A-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 523 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~ 601 (615)
+ ..+..++.+.+.... .+. .....+.+|+++|++.|+.+....+|..++|.+.|.+.|..|+..++++.+++.+++.
T Consensus 317 ~~~~~~~~~~G~~~~~~-~~~-~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 317 AVALIIAIALGIFLAGY-VPL-AAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHH-HHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 2 233333333333332 222 2334456788999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHh
Q 007159 602 LVWNLFA 608 (615)
Q Consensus 602 l~~~~~~ 608 (615)
++..+++
T Consensus 395 ~~~~~~~ 401 (402)
T TIGR00897 395 FLTAFIR 401 (402)
T ss_pred HHHHHhc
Confidence 7766553
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=5.4e-30 Score=270.88 Aligned_cols=360 Identities=16% Similarity=0.203 Sum_probs=263.7
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~ 289 (615)
..+.+..+....+...+.+..|.+.+++|.+..+++++.+++.++..+++++.|++.||+|||+++..+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33333345556777788889999999999999999999999999999999999999999999999999999999999988
Q ss_pred HhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHH
Q 007159 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (615)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~ 369 (615)
.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.+..+|++.|++.
T Consensus 88 ~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 88 ALSN--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred HHHc--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 8887 78889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
+++.++..++.....++.++++++.+.++. ...++..++++.++...+...+.....+....+.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (385)
T TIGR00710 166 SLAGILLSALIFFILPETLPYEARIQISTY--------------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPF 231 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcccCCHHHH--------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChH
Confidence 877666655554444433322211111110 124566778888888777766666677777788899
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH-
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC- 528 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 528 (615)
++++.+|+++.+.+.+.....++.+++.++.|++.||+++++....+. ....++.+... .............+..
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 307 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGL--ILFAVSAVLLE--ITAILGLGSWAMIIGPM 307 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH--HHHHHHHHHHH--HHHHhccchHHHHHHHH
Confidence 998889999999999999999999999999999999999886543221 11111111111 1111111122222222
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHH
Q 007159 529 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVF 590 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f 590 (615)
.+.+.+.....+ .......+..|++++++.++.+.....++.+.+.+.|.+.+..++...+
T Consensus 308 ~~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 308 MFVGIGNSMISS-IAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHH-HHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHH
Confidence 222232332333 3333333344678999999999888776666666777555544443333
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.1e-30 Score=276.99 Aligned_cols=375 Identities=14% Similarity=0.139 Sum_probs=265.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
.+++.++.+++.++...++.....+..|.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34566777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
++.+++++++ +++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.++||
T Consensus 95 ~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 95 VGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999998888 78889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHH---HHHHHH
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHF---CHNWGT 440 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~---~~~~~~ 440 (615)
+.|++..+..++ .+ ++... .+++.+.. +++.+...+............++.+++++.++....... +.....
T Consensus 173 ~~f~i~~~~~~~-~~-~~~~~--~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (426)
T PRK12307 173 AAFFVGLLPVLL-VI-YIRAR--APESKEWE-EAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGAN 247 (426)
T ss_pred HHHHHHHHHHHH-HH-HHHHH--CCCChHHH-HhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 999874433222 22 11111 11111100 000000000000000001124566777777654433222 222233
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 441 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 441 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
+.+..++|.|+++ .|+++...+.+.+...++.++++++.|++.||+++|+....+. ................
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 319 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGL-------LMSFLFIFPLFRIPQD 319 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHHHHHHHHHHHccc
Confidence 3466788999987 5999999999999999999999999999999999885433211 1111111111111112
Q ss_pred chHHHHHHHHHHh--hhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHH
Q 007159 521 TPAMAVLCMACSQ--GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV 594 (615)
Q Consensus 521 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~ 594 (615)
... .+....++. ...+..........+..|++.+|++.|+.+.+..+++.++|.+.|++.+..|+.....+..
T Consensus 320 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~ 394 (426)
T PRK12307 320 NYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIV 394 (426)
T ss_pred cHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 222 111112221 1111111222334566778999999999999999999999999999999988765443333
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.4e-31 Score=279.86 Aligned_cols=370 Identities=19% Similarity=0.220 Sum_probs=274.1
Q ss_pred HHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhc
Q 007159 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR 294 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~ 294 (615)
.++..+.+...+++..|.+.+++|++..++|++.+++.++..++.++.|+++||+|||++++++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST- 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-
Confidence 4566678888889999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHh-hhHhhhhcCCCchHHHHHHHHHH
Q 007159 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL-AVSPILIQKFGWPSVFYSFGSLG 373 (615)
Q Consensus 295 ~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~-~l~~~l~~~~gw~~~f~~~~~~~ 373 (615)
+++.+++.|++.|++.+...+...+++.+++|+++|++++++...+..+|.+++| .+++.+.+..+|++.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999 57777778889999999888776
Q ss_pred HHHHHHHHhhhcCCCCCCccccHHHH-hhh----hcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 374 SIWFALWLKKAYSSPKEDPELRAEEK-RHI----LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
++..++.+...++.+++.+....++. .+. ......+.......++.+++++.++.+.+..++.......+..+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555554444433322111000000 000 0000000011122356677888899888888888888888899999
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch-HHHHH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVL 527 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 527 (615)
.|+++.+|++..+.+.......++.++++++.+++.||..+++..... ...................... ...+.
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA----VFFMALIIVSLLVYWLNPAANPLMDLIC 316 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHHhcCcchhHHHHHHH
Confidence 999998999999999999999999999999999999987544322211 1111111111111111111122 22222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHH
Q 007159 528 CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVF 590 (615)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f 590 (615)
.+..+...............+..+++.||++.|+.+.+..+|..++|.+.|.+.|..||+..|
T Consensus 317 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 317 LFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 233332222222223334556678899999999999999999999999999999998887643
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=5.4e-30 Score=272.64 Aligned_cols=370 Identities=15% Similarity=0.142 Sum_probs=262.4
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
+.+..+.+..++..++..+..+.+|. +.+++|.|..++|++.+++.+++.+++++.|+++||+|||++++.+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34455566667777788888888887 56889999999999999999999999999999999999999999999888877
Q ss_pred HHHHHhhh---c---cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 007159 286 TVLTPVAA---R---IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (615)
Q Consensus 286 ~~l~~~~~---~---~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~ 359 (615)
.+++.++. + .+++.+++.|+++|++.+...+....++.+++++++|++++++...+..+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 66554432 1 13557899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHH
Q 007159 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWG 439 (615)
Q Consensus 360 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~ 439 (615)
+||++.+++..++.++..++. ...++.+++ ++ ++ .++++.++ .++.......+..+.
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-~~------------------~~~~~~~~--~~~~~~~~~~~~~~~ 231 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLA-RPRPAVPPV-KG-ER------------------LPFRRVLG--RVWPYGMGLALASIG 231 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-hcCCCCCCC-Cc-cc------------------hhHHHHHH--HHHHHHHHHHHHHHH
Confidence 999999887665544333222 211111110 00 00 01222222 122222223333445
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
......++|.|+.+ .|++ ..+.......++.++++++.|++.||+++++..... ..+.......... ..
T Consensus 232 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 300 (399)
T PRK05122 232 FGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVS-------LLVEILGLLLLWL-AP 300 (399)
T ss_pred HHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-------HHHHHHHHHHHHH-hc
Confidence 56667788888876 4653 456666778888899999999999999987543211 1111111111111 12
Q ss_pred cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 520 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
+.....+..++.+.+.....+.......+..+++++|++.|+++....+|..++|++.|++.+..||+..|++.++++++
T Consensus 301 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 380 (399)
T PRK05122 301 SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALL 380 (399)
T ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 22233333334444443333333344556678899999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhcC
Q 007159 600 GTLVWNLFATG 610 (615)
Q Consensus 600 ~~l~~~~~~~~ 610 (615)
+.++...++++
T Consensus 381 ~~~~~~~~~~~ 391 (399)
T PRK05122 381 GLALTWLLYRR 391 (399)
T ss_pred HHHHHHHhccc
Confidence 87776655443
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.9e-29 Score=275.46 Aligned_cols=389 Identities=15% Similarity=0.140 Sum_probs=258.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchh-hHH-----HHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTT-VGL-----IQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGV 279 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~-~g~-----i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~ 279 (615)
+++++.+.++.++.+++...++...|.+.++++.+... .++ +.++..+++.++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45666777888889999999999999999998644322 122 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccChH--------HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhh
Q 007159 280 IWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (615)
Q Consensus 280 ~l~~i~~~l~~~~~~~~~~--------~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~ 351 (615)
++++++.+++++++ ++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+..+|.++|+.
T Consensus 95 ~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 554 38899999999999999999999999999999999999999888888888886
Q ss_pred hHhhhh--------cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhh
Q 007159 352 VSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK 423 (615)
Q Consensus 352 l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 423 (615)
+...+. ..+|||+.|++.+++.++. +++....+++|..... .+..+... .......+..+++.++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQH---VDKLEQGD-REGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHH---HHhhhhhc-cccccccccCCHHHHHHH
Confidence 665443 2589999999866544432 2222223332221000 00000000 000000112245555543
Q ss_pred -hhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHH
Q 007159 424 -APVWA-LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIM 501 (615)
Q Consensus 424 -~~~~~-~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~ 501 (615)
++.+. .....++....++.+..|+|.|+++.+|++....++......++..++.++.|+++||+|+|+.+..+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~---- 323 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGS---- 323 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH----
Confidence 22222 222334455667788889999998888999888888888888889999999999999999986433221
Q ss_pred HHHHHHHHHHHHHHhccccchHHHH-HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhe
Q 007159 502 QSIGFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 580 (615)
Q Consensus 502 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l 580 (615)
+.+.+....++..........++ ..++.+.+.............+..|++.||++.|+.+.+..+++.++|.+.|++
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l 401 (490)
T PRK10642 324 --VALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWL 401 (490)
T ss_pred --HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111122222222 222222221111112222334467889999999986666778889999999999
Q ss_pred eccC-ChhHHHHHHHHHHHHHHHHHHHH
Q 007159 581 LQRG-SWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 581 ~~~~-g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
.+.. ++...+++..+.++++.+..++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 402 VESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 8764 45555555555555555555444
No 32
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.1e-29 Score=268.70 Aligned_cols=363 Identities=15% Similarity=0.097 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
.+..+++..++.........+.+|.+.+++|.|..++|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566677778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHH
Q 007159 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (615)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~ 367 (615)
++++++ +++.+++.|++.|++.+...+...+.+.+..++++|+++++++..+..+|..+||.+++.+.+...|... +
T Consensus 87 ~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~ 163 (381)
T PRK03633 87 GLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP-W 163 (381)
T ss_pred HHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-H
Confidence 888887 7888999999999999999898888888888899999999999999999999999999998775433333 2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007159 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWM 447 (615)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 447 (615)
..+.+......++.. ..+ +++.++ + +..++++.++++.++......+...........++
T Consensus 164 ~~~~~~~~~~~~~~~-~~~-~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 164 VTGLVLAAILPLLFT-RIL-NQQAEN-H-----------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLM 223 (381)
T ss_pred HHHHHHHHHHHHHHh-ccc-CCCCCC-C-----------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222212211 111 111100 0 00134456777777655544444445556667789
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHH
Q 007159 448 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL 527 (615)
Q Consensus 448 p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 527 (615)
|.|+++ .|.+....+.+.+...++.++++++.|++.||+++++....+. ....++ .... . . .......
T Consensus 224 p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~--~~~~~~-----~~~~-~--~-~~~~~~~ 291 (381)
T PRK03633 224 PLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQV--FVVILG-----SIAM-L--S-QAAMAPA 291 (381)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHH--HHHHHH-----HHHH-h--h-hHHHHHH
Confidence 999987 6999999999999999999999999999999999886433221 111111 1111 1 1 1111222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 528 CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
..+.+.+.....+.......+..++++++.+.+..+...++|..+||.+.|++.|..++...|.+.+++.++..+..+
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 222333333334444444556667777788888888889999999999999999999999999988888776654443
No 33
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=9.2e-30 Score=268.21 Aligned_cols=365 Identities=15% Similarity=0.113 Sum_probs=263.0
Q ss_pred HHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHH-HHHHHHHHHHHHHhh
Q 007159 215 AFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF-GVIWWSVATVLTPVA 292 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~-~~~l~~i~~~l~~~~ 292 (615)
.+++..+......+.+|. +.+++|.|..++|++.+++.+...+.+++.|+++||+|||+.++. +.++..++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 455666777777788887 467899999999999999999999999999999999999887554 556666667777777
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhH--HHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS--LAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~ 370 (615)
+ +++.+++.|++.|.+.+...|...++..++.++++|++. .++...+.++|.++||.+++++.+.+|||+.|++.+
T Consensus 85 ~--~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 85 R--NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred c--hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 7 778888899999988888888888999998877766654 678888889999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 371 SLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTY 450 (615)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~ 450 (615)
++.++..++.++..++.++++++... ..+.+..+++++++.+.+..++..........++|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGALT-----------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLL 225 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccccC-----------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 77666655554444443322111000 0122335566666666555555555455566788999
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Q 007159 451 YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMA 530 (615)
Q Consensus 451 ~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 530 (615)
+++.+|.++.+.+.+.....+...++.++.|++.||+++|+...... ... ..........+..+..+....
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~ 296 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA-----LAG----VAFYTGLAADNSLWALLMLQL 296 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH-----HHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 98889999999998888777778888899999999999886543211 111 111111111122222222222
Q ss_pred HHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 531 CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+.+...+...+......++..|++++++.++.+...++|..++|.+.|.+.+..||+..|++.+++.+++.++..+.
T Consensus 297 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 22222223333333444555677788999999999999999999999999999999999999998888877766544
No 34
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-30 Score=262.75 Aligned_cols=383 Identities=17% Similarity=0.219 Sum_probs=311.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
..++.+.+..+...+.++..+++++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~ 90 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLL 90 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHH
Confidence 34667778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcc-ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-
Q 007159 284 VATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (615)
Q Consensus 284 i~~~l~~~~~~~-~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g- 361 (615)
+..+..+++.+. +++.+++++++.|++.+ .+...+..++.+||++++|.++|+.. ..++|..+...+++.++...|
T Consensus 91 IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~ 168 (417)
T COG2223 91 IPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF 168 (417)
T ss_pred HHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh
Confidence 999988887732 34689999999999954 56888999999999999999999999 899999999999999999888
Q ss_pred --chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHH
Q 007159 362 --WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWG 439 (615)
Q Consensus 362 --w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~ 439 (615)
|+.+..+..+..++..+..++...+.++..+..++... ..++.+++++..|.+.+.++..+.+
T Consensus 169 ~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------~~~~~v~~~~~~W~lsllY~~tFG~ 233 (417)
T COG2223 169 LAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------AQLKAVFSNKDTWLLSLLYFATFGG 233 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------hHHHHHhcCcchHHHHHHHHHHHHH
Confidence 99988888877777777777666665543221111110 1456678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcc-
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH- 518 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 518 (615)
+.++..++|.|+++++|.+...+|.+.....+.+.+.++++|+++||+|.+|...... ..+.+. ...+....
T Consensus 234 Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f------~~~~~~-~~~l~~~~~ 306 (417)
T COG2223 234 FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVF------VGMALA-AALLSLFLT 306 (417)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHH------HHHHHH-HHHHHcccc
Confidence 9999999999999999999999999999999999999999999999999987544221 111111 11111111
Q ss_pred ----ccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC-hhHHHHHH
Q 007159 519 ----VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVA 593 (615)
Q Consensus 519 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g-~~~~f~~~ 593 (615)
.......+..++......+......+.....+.+++.|.+.|+...++.+|++.-|...|...+..| +...|++.
T Consensus 307 ~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~ 386 (417)
T COG2223 307 GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLL 386 (417)
T ss_pred ccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHH
Confidence 1334444454555555556666666777777778899999999999999999999999999999855 99999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 007159 594 VVLYIIGTLVWNLFATG 610 (615)
Q Consensus 594 ~~~~l~~~l~~~~~~~~ 610 (615)
..+.+++.+.....+.+
T Consensus 387 ~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 387 LAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999988866655444
No 35
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=6.1e-30 Score=276.42 Aligned_cols=387 Identities=13% Similarity=0.156 Sum_probs=279.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
+|.++..+++...........++...|.+.+++|++..+++++.+.+.++..++.+++|+++||+|||++++.+.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 47777777777666656666678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHH-HHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 285 ATVLTPVAARIGLPFLLI-MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
+.+++++++ +++.+++ .|++.|++.+...+...+++.++++ ++|++++++...+..+|..++|.+++.+.+.+|||
T Consensus 97 ~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr 173 (455)
T TIGR00892 97 GMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWR 173 (455)
T ss_pred HHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChH
Confidence 999888887 6666654 5789999998877788888899995 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCc-cccHHHHhhhhcCCc-------cccccccccHHHHhhhhhHHHHHHHHHH
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEEKRHILGGSI-------SKEAVSVIPWKLILSKAPVWALIISHFC 435 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 435 (615)
+.|++.+++.++..+..+...+.++.+.. ..+.++......... .++..+..++ .++++|.++...+..++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 252 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSGNVI 252 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHHHHH
Confidence 99999888776554443333322211000 000000000000000 0000011122 36788888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHHH
Q 007159 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV--SKGLSITAVRKIMQSIGFLGPAFFL 513 (615)
Q Consensus 436 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~l 513 (615)
...+.+...+++|.|+++ +|++..+.+++.++.+++.++++++.|++.||.. +++.. ....+.+..++.+
T Consensus 253 ~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-------~~~~~~~~~~l~~ 324 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQY-------LFSFALLFNGLTH 324 (455)
T ss_pred HHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHH-------HHHHHHHHHHHHH
Confidence 777777888899999977 7999999999999999999999999999999742 22111 1111111111111
Q ss_pred HHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccC-ChhHHHH
Q 007159 514 TQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFK 591 (615)
Q Consensus 514 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~-g~~~~f~ 591 (615)
+.....+..+ +.+..++.+.+.....+.......+..++++++++.|+++.+..+|.++||.++|.+.+.. +|+..|+
T Consensus 325 ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~ 404 (455)
T TIGR00892 325 LLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFY 404 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHH
Confidence 1111222333 3333444444433333443444556678899999999999999999999999999999975 6999999
Q ss_pred HHHHHHHHHHHH
Q 007159 592 VAVVLYIIGTLV 603 (615)
Q Consensus 592 ~~~~~~l~~~l~ 603 (615)
+.+++.+++.+.
T Consensus 405 ~~~~~~li~~~~ 416 (455)
T TIGR00892 405 ASGSIVVSAGLF 416 (455)
T ss_pred HhhHHHHHHHHH
Confidence 888877766553
No 36
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.8e-30 Score=281.92 Aligned_cols=402 Identities=16% Similarity=0.163 Sum_probs=267.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCC--------chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWN--------STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s--------~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~ 277 (615)
+...+++.+..+...++...+.+..+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33444444455666677788888888888888777 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhH---
Q 007159 278 GVIWWSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--- 353 (615)
Q Consensus 278 ~~~l~~i~~~l~~~~~-~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~--- 353 (615)
+.++..++.+++.+.. ..+++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.+++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988886544 224557999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcCCCC-----CCccccHHHHhhhhcCCccccc-----------------
Q 007159 354 PILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK-----EDPELRAEEKRHILGGSISKEA----------------- 411 (615)
Q Consensus 354 ~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----------------- 411 (615)
+.+.+..+||+.|++.++..++..+..+. .++.+. ++.+...+......+.......
T Consensus 187 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T TIGR00879 187 VSLNNTLGWRIPLGLQLIPAGLLFLGLFF-LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKR 265 (481)
T ss_pred hcCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 77667789999999865554444333333 333221 0100000000000000000000
Q ss_pred cccccHHHHhh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 412 VSVIPWKLILS------KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD 485 (615)
Q Consensus 412 ~~~~~~~~l~~------~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~d 485 (615)
.....++.+++ .+.++...+..+...........+.|.++++ +|++....+.......++.+++.++.|++.|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 344 (481)
T TIGR00879 266 SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD 344 (481)
T ss_pred hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001122222 2222222333333223334445566666655 7999988889888999999999999999999
Q ss_pred HhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc----cchHHHHHHHHHHhhhhhhhhhhhhh-hhhccCcchhhHHHH
Q 007159 486 TLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV----RTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLG 560 (615)
Q Consensus 486 r~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g 560 (615)
|+++|+....+. ....++++...+........ ..........+...+......+.... ..+..+++.|+++.|
T Consensus 345 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 422 (481)
T TIGR00879 345 RFGRRPLLLIGA--AGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGIS 422 (481)
T ss_pred HhcchHHHHHHH--HHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHH
Confidence 999886544321 11111111111100111110 02222222222222222222232333 355567789999999
Q ss_pred HHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcCC
Q 007159 561 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 611 (615)
Q Consensus 561 l~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~~ 611 (615)
+.+...++|.+++|.+.|.+.+..+|...|++.+++++++.++..++.++.
T Consensus 423 ~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 423 IAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 999999999999999999999998999999999888888777766554433
No 37
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=2.3e-29 Score=273.91 Aligned_cols=371 Identities=13% Similarity=0.151 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
.+.++++..++..++...+.+.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34455566777778888888999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHH
Q 007159 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (615)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~ 367 (615)
++.+++ +++.+++.|+++|++.+...+...+++.+++|+++|++++++......+|..+||.+++.+.+..|||+.|+
T Consensus 91 ~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 888876 788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccHHHHh-----------hhhcCC--------------------------cccc
Q 007159 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR-----------HILGGS--------------------------ISKE 410 (615)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------------------------~~~~ 410 (615)
+...+..+..++.....++.+.+..+.+..... ...+.. ....
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 877666555554444433322221111100000 000000 0000
Q ss_pred ccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007159 411 AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (615)
Q Consensus 411 ~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~ 490 (615)
.....+. ++++++.++......++..........+.|.|++..+|.++...++......++..++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1111233 367888888888878877777777777889999888899999999999888888888989999999999988
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhccccchHH-HHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHH
Q 007159 491 GLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM-AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLA 569 (615)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg 569 (615)
+....+. ....+....+.........+. .+..++.+.+.............+..+++.+|.+.|+.++...+|
T Consensus 328 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 401 (471)
T PRK10504 328 RVLVATT------LGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLS 401 (471)
T ss_pred HHHHHHH------HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHH
Confidence 6543221 111111111111111222222 222223333333333333444556678899999999999999999
Q ss_pred HHHHHHHhhheeccCChh
Q 007159 570 GVFGTAATGYILQRGSWD 587 (615)
Q Consensus 570 ~~igp~l~G~l~~~~g~~ 587 (615)
..+|+.+.|.+.+..++.
T Consensus 402 ~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 402 MSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999998876664
No 38
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=3.9e-29 Score=266.69 Aligned_cols=374 Identities=17% Similarity=0.155 Sum_probs=266.2
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchh-----hHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTT-----VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~-----~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
..+++..++..+......+.+|.+.+++|++..+ .|++.+++.++..++.+++|+++||+|||++++.+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3444555666677777888999999999988654 48999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.+++.+.+ +++.+++.|++.|++.+ ..+....++.+++++++|++++++...+..+|.+++|.+++.+.+..+|++
T Consensus 97 ~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred HHHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 888888777 78889999999999865 467788889999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHH-HHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWAL-IISHFCHNWGTFIL 443 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~~ 443 (615)
.|++.+++.++..++.....++++++.++.+..+.+ +....+++++++.. ....++........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMR---------------EVVTSLKNPKLVLSLFVTTLIIQVATGSI 238 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHH---------------HHHHhCcCCchHHHHHHHHHHHHHHHHHH
Confidence 999888776665555444444332211111110000 12223455555443 33333344445556
Q ss_pred HHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 444 LTWMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 444 ~~~~p~~~~~~~g~s~~---~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
..++|.|..+..+.... ..+.+..+.+++..++.+..|++.||+++++...... .... +........+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~-------~~~~--~~~~~~~~~~ 309 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITAL-------IFSV--LLLIPMSFVQ 309 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH-------HHHH--HHHHHHHHhc
Confidence 67788888775442221 2455566677888888999999999999886543221 1111 1111111112
Q ss_pred chHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 521 TPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 521 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
..+.. +..++.+.+.....+..........+++++|+..++.+.+..+|..+||.++|.+.+..||+..|++.+++.++
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 310 TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLF 389 (408)
T ss_pred cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 23333 33333344333333333334445567788999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhcC
Q 007159 600 GTLVWNLFATG 610 (615)
Q Consensus 600 ~~l~~~~~~~~ 610 (615)
+.++.....++
T Consensus 390 ~~~~~~~~~~~ 400 (408)
T PRK09874 390 NAVYSWNSLRR 400 (408)
T ss_pred HHHHHHHHHHH
Confidence 87766554433
No 39
>PRK12382 putative transporter; Provisional
Probab=99.98 E-value=3.6e-29 Score=265.71 Aligned_cols=366 Identities=15% Similarity=0.178 Sum_probs=253.9
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
..+.+..++.........+.+|. +.+++|.|..++|++.+++.+++.++++++|+++||+|||++++.+.++..++.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (392)
T PRK12382 18 FRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLA 97 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 33444455555666677777876 56899999999999999999999999999999999999999999998877765543
Q ss_pred HH---hhh---ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 289 TP---VAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 289 ~~---~~~---~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
+. +.+ ..+++.+++.|+++|++.+...+...+++.+++|+++|++++++...+..+|.++||++++++.+.+||
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 177 (392)
T PRK12382 98 YLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGF 177 (392)
T ss_pred HHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 22 111 125778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
++.+++..++.++.... ....++.+++++. + .+.++..+ .++...+..++.......
T Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-------------------~~~~~~~~--~~~~~~~~~~l~~~~~~~ 234 (392)
T PRK12382 178 AALALTTMVLPLLAWAF-NGTVRKVPAHAGE-R-------------------PSLWSVVG--LIWKPGLGLALQGVGFAV 234 (392)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccCCCCCccc-C-------------------chHHHHHH--HHHHhHHHHHHHHHHHhH
Confidence 98877554443332222 1211211111000 0 01111111 122222222333445556
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
...+.|.|+++ .|++. .+.......++.++++++.|++.||+++++....+. ....+ ...+... ..+..
T Consensus 235 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~--~~~~~-----~~~~~~~-~~~~~ 303 (392)
T PRK12382 235 IGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSL--LVETV-----GLLLLWL-APTAW 303 (392)
T ss_pred HHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHH--HHHHH-----HHHHHHH-cccHH
Confidence 67788888876 46653 456666777788899999999999999987654321 11111 1111111 12222
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 523 AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
...+...+.+.+.....+.......+..+++++|++.|+.+....+|..++|.+.|++.|..||+..|.+.+++.+++.+
T Consensus 304 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 383 (392)
T PRK12382 304 VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGII 383 (392)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 22233333333333333333344566678899999999999999999999999999999999999999999998888877
Q ss_pred HHHHHhc
Q 007159 603 VWNLFAT 609 (615)
Q Consensus 603 ~~~~~~~ 609 (615)
+.+...|
T Consensus 384 ~~~~~~~ 390 (392)
T PRK12382 384 VTILSFR 390 (392)
T ss_pred HHHhhcc
Confidence 7665543
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.98 E-value=1.8e-29 Score=264.35 Aligned_cols=355 Identities=15% Similarity=0.126 Sum_probs=265.5
Q ss_pred HHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh
Q 007159 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~ 292 (615)
+...++..++.....+.+|.+..+++.+..++|++.+++.++..++++++|+++||+|||++++.+.++..++.++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777778888899999999999999999999999999999999999999999999999999888887776665
Q ss_pred hc---cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHH
Q 007159 293 AR---IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (615)
Q Consensus 293 ~~---~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~ 369 (615)
.. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++++.+..||++.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 41 257889999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHhhhcCCCCC-CccccH-HHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HH
Q 007159 370 GSLGSIWFALWLKKAYSSPKE-DPELRA-EEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL-TW 446 (615)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~-~~ 446 (615)
++..++..++......+++++ +++..+ +..++ ....++.++++|.++...+..++......... .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAASEIQALSNAVLRD-----------TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVAL 233 (365)
T ss_pred HHHHHHHHHHHHhcccccCCCccccccchhHHHH-----------HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766555444433322221111 111100 00000 01245667888888888777777776666666 78
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHH
Q 007159 447 MPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAV 526 (615)
Q Consensus 447 ~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 526 (615)
.|.|.++.+|.+..+.+.+.....++..++.++.+++.||+++++....+ ................+.....+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 306 (365)
T TIGR00900 234 FPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGA-------IFVIGLAILVVGLTPPNFPLFLV 306 (365)
T ss_pred hHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHH-------HHHHHHHHHHHHhhchhHHHHHH
Confidence 89999888899999999999999999999999999999999887533211 11111111111111111222233
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC
Q 007159 527 LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 585 (615)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g 585 (615)
..++.+.+.....+.......+..++++||++.|+.+....++..++|.+.|++.|..|
T Consensus 307 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 307 LWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344444333334444455666788999999999999999999999999999988643
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.98 E-value=8.5e-29 Score=264.22 Aligned_cols=366 Identities=12% Similarity=0.057 Sum_probs=264.4
Q ss_pred HHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh
Q 007159 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~ 292 (615)
.+..+...+....+.+.+|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 44445666777888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~ 372 (615)
+ +++.++++|+++|++.+...+...+++.|+++++++++++++...+..+|..+||++++.+.++.|||+.|++.+++
T Consensus 102 ~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 102 T--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7 88889999999999998777777888999999999999999999999999999999999999889999999998887
Q ss_pred HHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (615)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~ 452 (615)
.++..++.+...++.++++++..... ....+++.++++|.+|...+..++.....+.+..+.|.+++
T Consensus 180 ~~i~~~~~~~~lp~~~~~~~~~~~~~-------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~ 246 (413)
T PRK15403 180 GLIAFVGLLLAMPETVKRGAVPFSAK-------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILI 246 (413)
T ss_pred HHHHHHHHHHhCCCCccccCCCCChH-------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 76665544443343322111100000 01125677889999999888877777777788888899999
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMAC 531 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 531 (615)
+.+|+++.+.++.......+..++..+.+++.++..+++...... ....++.+........ ..+.+. ..+..++.
T Consensus 247 ~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~--~~~~ig~~l~~~~~~~--~~~~~~~~~~~~~l~ 322 (413)
T PRK15403 247 DAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAV--PIQLVGLALLIVGNLL--WPHVWLWSVLGTSLY 322 (413)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH--HHHHHHHHHHHHHHHH--ccccHHHHHHHHHHH
Confidence 989999999999888888888888777777665444333221111 1112222222111111 122222 22222333
Q ss_pred HhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 532 SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
+.+.....+. ............+|++.++.+.....+..+++.+.|++.+.. -...|...++++.+
T Consensus 323 ~~G~~~~~p~-~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~ 388 (413)
T PRK15403 323 AFGIGLIFPT-LFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG-GRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHhHH-HHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHH
Confidence 3333333222 222121222334799999999999999999999999998764 35555444444433
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.98 E-value=1.7e-29 Score=270.53 Aligned_cols=368 Identities=16% Similarity=0.107 Sum_probs=263.9
Q ss_pred HHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh---h
Q 007159 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---A 292 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~---~ 292 (615)
.++..+......+.+|.+.++++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.++ .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 4445556667788889999999999999999999999999999999999999999999999988887777665442 1
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~ 372 (615)
...+++.+++.|++.|++.+...++..+++.++.|+++|+++.++......+|..+||.+++.+.+..+|+|.|++.++.
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~ 185 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAG 185 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 22367788899999999999888999999999999999999999999999999999999999999888999999887766
Q ss_pred HHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (615)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~ 452 (615)
.++..++.+.. ++.++++++.... .+ .....++.++++|.++...+..++... ......++|.|++
T Consensus 186 ~~~~~~~~~~l-~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~ 251 (417)
T PRK10489 186 TFITLLPLLRL-PALPPPPQPREHP-LR-----------SLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALAD 251 (417)
T ss_pred HHHHHHHHHhC-CCCCCCCcccccc-hH-----------HHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHH
Confidence 65554444333 2222111110000 00 001134556777776665555444332 4566778999999
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS 532 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 532 (615)
+.+|.+....+++.+...++.+++.++.+++.||.++++.+.. +.++.++.+..+...+.......+.++.
T Consensus 252 ~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 252 EVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLL---------STLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred hccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHH---------HHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 8889999999999999999999999999999998655432221 1111111111122223333333333222
Q ss_pred hhhhhhhhhhhhh-hhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHH
Q 007159 533 QGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 533 ~~~~~~~~~~~~~-~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
+...+...+.... ..+..+++.||++.|+.+....+|..+||.+.|++.+..|+...+...+++.++..++...
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 2333333333333 4455677889999999999999999999999999999989888888777665554444433
No 43
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=5.1e-29 Score=268.01 Aligned_cols=360 Identities=14% Similarity=0.140 Sum_probs=244.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHH-HHHHH-----HHHHHHHHhhHHhhhhcCCchHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLI-QSSFF-----WGYLLTQIVGGIWADKFGGKPVLGFG 278 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i-~s~~~-----l~~~l~~~~~G~l~Dr~Grk~~l~~~ 278 (615)
|++....++++.++.+++...+++..|.+.++++.+..+.+.+ .+... +...+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4567888888999999999999999999999999988776543 33222 22246789999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccChH--------HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHh
Q 007159 279 VIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL 350 (615)
Q Consensus 279 ~~l~~i~~~l~~~~~~~~~~--------~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~ 350 (615)
.+++.++.+++++++ +++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++
T Consensus 93 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 544 4688999999999999999999999999999999999999988888888888
Q ss_pred hhHhhhh--------cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhh
Q 007159 351 AVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILS 422 (615)
Q Consensus 351 ~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 422 (615)
.+++.+. +.+|||+.|++..+.. +.. ++. ....+ +.++...++.+ ......++...+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~-~~~--~~~~~-e~~~~~~~~~~----------~~~~~~~~~~~~ 235 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFI-FLI--RRSLE-ETEEFLARKHR----------PSMREIFRSLAA 235 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHH-HHH--HHhcC-CCHHHHHhhhc----------cccccHHHHHHH
Confidence 8777652 4689999998644332 111 111 11111 11110000000 000112333445
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHH
Q 007159 423 KAPVWALI-ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIM 501 (615)
Q Consensus 423 ~~~~~~~~-l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~ 501 (615)
+++.+... +..++.....+....|.|.|+++.+|++..+.++...+..++.+++.++.|++.||+++|+......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~---- 311 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFT---- 311 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH----
Confidence 55544432 3333445556677889999999888999999998888888999999999999999999886543211
Q ss_pred HHHHHHHHHHHHHHhccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHH-HHHHHHHHHhhh
Q 007159 502 QSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGV-LAGVFGTAATGY 579 (615)
Q Consensus 502 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~-lg~~igp~l~G~ 579 (615)
..........+............ ....+.+.+.............+..|++.|+++.|+.+.+.. +++.++|.+.|+
T Consensus 312 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 312 -VLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred -HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 11111110011111112222112 112222222222222223345566788999999999655554 468889999999
Q ss_pred eeccCCh
Q 007159 580 ILQRGSW 586 (615)
Q Consensus 580 l~~~~g~ 586 (615)
+.|..|+
T Consensus 391 i~~~~g~ 397 (434)
T PRK15075 391 LIHVTGD 397 (434)
T ss_pred HHHhcCC
Confidence 9998775
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=1.1e-29 Score=277.24 Aligned_cols=366 Identities=16% Similarity=0.217 Sum_probs=278.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
++..+++..++..++.....+.+|.+.+++|.+..+++++.+.+.++..++.++.|+++||+|||++++++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45566677788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHH
Q 007159 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (615)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~ 367 (615)
++++++ +++.+++.|+++|++.+...+...+++.+++|+++|+++++++..+..+|..+||.+++++.++++||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999887 888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCcc-ccHHHH------------hhhhcCCcc--------------------------
Q 007159 368 SFGSLGSIWFALWLKKAYSSPKEDPE-LRAEEK------------RHILGGSIS-------------------------- 408 (615)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~-------------------------- 408 (615)
+.+.+.++..++.....++++++..+ .+.... ....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88777665555444443332221111 110000 000000000
Q ss_pred ccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007159 409 KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (615)
Q Consensus 409 ~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g 488 (615)
+......+ .++++++.++...+..++..+..+....++|.|+++.+|+++.+.++......++..++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 00001112 24667888888888888888888888899999999999999999999999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHHH--hccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHH
Q 007159 489 SKGLSITAVRKIMQSIGFLGPAFFLTQ--LSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTA 565 (615)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~ 565 (615)
+|+....+ ..+...+..+.. ........ ......+.+.+......+......+..+++++|++.|+.+..
T Consensus 320 ~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 392 (485)
T TIGR00711 320 PRKLVTIG-------LILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFT 392 (485)
T ss_pred cHHHHHHH-------HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHH
Confidence 88543211 111111111111 11112222 233333334444333444444556677889999999999999
Q ss_pred HHHHHHHHHHHhhheecc
Q 007159 566 GVLAGVFGTAATGYILQR 583 (615)
Q Consensus 566 ~~lg~~igp~l~G~l~~~ 583 (615)
..+|+.+|+.+.|.+.+.
T Consensus 393 ~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 393 RQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998864
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=1.1e-28 Score=265.58 Aligned_cols=387 Identities=17% Similarity=0.183 Sum_probs=261.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHH-HHhhc--CCCchhhHHHH-----HHHHHHHHHHHHhhHHhhhhcCCchHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILP-MSKEF--NWNSTTVGLIQ-----SSFFWGYLLTQIVGGIWADKFGGKPVL 275 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--g~s~~~~g~i~-----s~~~l~~~l~~~~~G~l~Dr~Grk~~l 275 (615)
++++.+...++..++.+++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 44567778888888899999998887775 45555 67666 45543 345566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccChH--------HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHH
Q 007159 276 GFGVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSV 347 (615)
Q Consensus 276 ~~~~~l~~i~~~l~~~~~~~~~~--------~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ 347 (615)
.++.++++++.+++++++ ++. .++++|+++|++.+..++....++.|++|+++|++..+....+..+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 98 MLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999998 544 5888999999999999999999999999999999999999999999999
Q ss_pred HHhhhHhhhh--------cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHH
Q 007159 348 TGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKL 419 (615)
Q Consensus 348 ig~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (615)
+++.+...+. ..+|||+.|++.++..++. +......++.+ +..+...+. +.. ++ +....+.
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~----~~~~~~~~~--~~~--~~--~~~~~~~ 244 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA----EFEQQQHEQ--AAA--KK--RIPVIEA 244 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh----hHHHHHhhc--ccc--cc--cCCHHHH
Confidence 9887776654 3579999998776654332 21111111111 110000000 000 00 0112233
Q ss_pred HhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHH
Q 007159 420 ILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVR 498 (615)
Q Consensus 420 l~~~~~~~~~~l-~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~ 498 (615)
++++++.+...+ ..++..+..+...+|.|.|+++.+|++......+..+.++...++.++.|+++||+++|+....+.
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~- 323 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA- 323 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH-
Confidence 556666665543 344555667778889999998888998876655555667777888899999999999986543221
Q ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhh-hhhhhhhhhhccCcchhhHHHHHHHHHH-HHHHHHHHHH
Q 007159 499 KIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAF-SQSGLYSNHQDIGPRYAGVLLGLSNTAG-VLAGVFGTAA 576 (615)
Q Consensus 499 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~gl~~~~~-~lg~~igp~l 576 (615)
....+............+.....+...++.+..... .........+..+++.|+++.|+.+.+. .+++.++|.+
T Consensus 324 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i 399 (438)
T PRK09952 324 ----LIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI 399 (438)
T ss_pred ----HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence 111111111111111122222322222322222222 2223333455577789999999866554 5899999999
Q ss_pred hhheecc--CChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 577 TGYILQR--GSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 577 ~G~l~~~--~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
.|++.+. .+|...+.+.+++.+++.+..+..++
T Consensus 400 ~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 400 AAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 9999884 35888888888888887777665543
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=2.9e-30 Score=269.14 Aligned_cols=347 Identities=25% Similarity=0.414 Sum_probs=259.4
Q ss_pred HHHHHHHhhhhhHHHHhHH-HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 007159 213 FSAFLLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
++..++..++...+.+..| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||++++++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4556677778888888999 889999999999999999999999999999999999999999999999999999666666
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~ 371 (615)
++ +.+.+++.|++.|++.+...+...+++.+++|+++|++++++......+|.++||.+++++.+.++||+.|++.++
T Consensus 82 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 AS--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hh--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 55 6778999999999999999999999999999999999999999999999999999999999988999999999988
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCcccccccccc-HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIP-WKLILSKAPVWALIISHFCHNWGTFILLTWMPTY 450 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~ 450 (615)
+.++..++.....++++++++..++.+.. .+.+....+ ++.+++++.+|.+.+..++..........++|.|
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchh
Confidence 88877664333332222221111111100 000011112 5667777777755566666666777888999999
Q ss_pred HHHHhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc-cchHHHHHH
Q 007159 451 YNQVLKFN-LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV-RTPAMAVLC 528 (615)
Q Consensus 451 ~~~~~g~s-~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 528 (615)
+.+.+|++ ..+.+.+..+..+...++.++.|++.||+++++... ............+...... +..+..+..
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLL------IAILLLILGALGLLLLPFSSSPVWLIIAL 306 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH------HHHHHHHHHHHHHCCSHHHCHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 88889999 899999999999999999999999999998764322 1122222222222222222 223333344
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHH
Q 007159 529 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 574 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp 574 (615)
++.+.+.....+.......+..+++++|++.|+.+...++|..+||
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 307 FLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4444444334444444556667779999999999999999999987
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=3e-29 Score=274.78 Aligned_cols=388 Identities=15% Similarity=0.177 Sum_probs=263.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
++|+.+..+++.+++..++.....+.+|.+.+++|++..+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45677778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
++.++..+++ +++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|.+++.+.+.++||
T Consensus 97 ~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 97 VGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999988887 78889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHH-HHhhhhcCCccccccccccH----------HHHhh----------
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE-EKRHILGGSISKEAVSVIPW----------KLILS---------- 422 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~l~~---------- 422 (615)
+.|++..+..+ ..++.....++.++..++.+.. +.+...+....... ..... ...+.
T Consensus 175 ~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (496)
T PRK03893 175 ALFFIGILPII-FALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH-RIINILLTLAAAAALWFCFAGNLQNAAIVA 252 (496)
T ss_pred HHHHHHHHHHH-HHHHHHHhCCCchhhhhhccccccchhHHHHHhcchh-HHHHHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99986433322 2222222222211100000000 00000000000000 00000 00000
Q ss_pred --------------------h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH
Q 007159 423 --------------------K-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 481 (615)
Q Consensus 423 --------------------~-~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g 481 (615)
+ +....+.+..+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g 332 (496)
T PRK03893 253 VLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGG 332 (496)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000000111111113456889999877899999999999999999999999999
Q ss_pred HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH-HHHHhhhhhhhhhhhhhhhhccCcchhhHHHH
Q 007159 482 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 560 (615)
Q Consensus 482 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 560 (615)
++.||+++++..... ...................+..... +..+....+..........+..+++.+|+++|
T Consensus 333 ~l~dr~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 405 (496)
T PRK03893 333 FLGDWLGTRKAYVCS-------LLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLG 405 (496)
T ss_pred HHHHHhcchHHHHHH-------HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccc
Confidence 999999988643321 1111111111111111222222222 22122222222222233455667789999999
Q ss_pred HHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 561 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 561 l~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
+.+.+..+|..+||.+.|++.|..|+...+...++++.+..+
T Consensus 406 ~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 406 FTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVI 447 (496)
T ss_pred hhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998887665554444333
No 48
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=2.7e-28 Score=259.14 Aligned_cols=359 Identities=14% Similarity=0.157 Sum_probs=263.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
.++.+.+..+..++..+....+.+.+|.+.+++|.|+.+++++.+++.+++.++++++|+++||+|||+++..+.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 35555555566666667777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.+++.+.+ +++.+++.|++.|++.+...+....+..+.++++++++++++...+..+|..+||.+++.+.+..|||+
T Consensus 86 ~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 998888877 788899999999999988888888899999988999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.|++.+++.++..++.....++.++++++ +.+. ...++.+++++.++...+..+........+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADAR--RTRV--------------LASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccc--hhHH--------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 99988776665544444433333222111 1110 1245667788887776666666555666666
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
.+.+.++++.+|++..+.+++.....++..++..+.+++.||.++.. .. .......................+.
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM--WQ----SVICCLLAGLLMWIPGWFGVMNVWT 301 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH----HHHHHHHHHHHHHHHHHhccccHHH
Confidence 77888998889999999999988888888889999999999987321 10 1111111111111111111122222
Q ss_pred HH-HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhH
Q 007159 525 AV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDD 588 (615)
Q Consensus 525 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~ 588 (615)
.. ...+.+.+. +...+.......+..|+++|++.++.+....+|..+++.++|.+.+...+..
T Consensus 302 ~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 302 LLVPAALFFFGA-GMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 22 223333333 3333434443444456788999999999999999999999999877644433
No 49
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1e-28 Score=260.72 Aligned_cols=369 Identities=17% Similarity=0.172 Sum_probs=261.7
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHH
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~l 300 (615)
+....+.+.+|.+.+++|++..+++++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+++ +++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHH
Confidence 3455667889999999999999999999999999999999999999999999999999999999999988887 78889
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 380 (615)
++.|++.|++.+...+...+++.+++++++|++++++......+|..++|.+++.+.+..+|++.|++.+++.++..++.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998999999998877776655554
Q ss_pred HhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Q 007159 381 LKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT 460 (615)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~ 460 (615)
....++.++++++.+.+.+ ....+++..++++.++...+..++...+...+..+.|.++.+.+|+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 230 (377)
T PRK11102 163 FFFIPETLPKERRQPFHLR------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQ 230 (377)
T ss_pred HHhCCccCcccccCCCChH------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHH
Confidence 4444333221111000000 0112455677888887777776666666777777888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHhhhhhhh
Q 007159 461 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-HVRTPAMAVLCMACSQGSDAFS 539 (615)
Q Consensus 461 ~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 539 (615)
+.+.+.....++.+++.++.+++.||+++|+....+.. ......+.+.... .....+..+.......+.....
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 231 NFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLW------IQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999865442211 0011111111111 1112222222222222222222
Q ss_pred hhhhhhhhhccCcchhhHHHHHHHHHH-HHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcCC
Q 007159 540 QSGLYSNHQDIGPRYAGVLLGLSNTAG-VLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 611 (615)
Q Consensus 540 ~~~~~~~~~~~~~~~~g~~~gl~~~~~-~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~~ 611 (615)
.........+..|+.+|++.++.+... .+|..+++.+.+.. + .++...+...+++.+++.+++++..+++
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (377)
T PRK11102 305 SSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLAP-F-TSAWPMVWSMAFCSILSILFYLYASRPK 375 (377)
T ss_pred hHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhcc-C-CChHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 222233344455688999999987764 46667777665433 2 2333344444455455544444444433
No 50
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=3.7e-28 Score=258.77 Aligned_cols=349 Identities=15% Similarity=0.153 Sum_probs=257.7
Q ss_pred HHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhcc
Q 007159 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~ 295 (615)
.++..+....+.+.+|.+.+++|.++.+++++.+++.+++.++.+++|+++||+|||+++..+.++..++.+++.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE-- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--
Confidence 444556677788888999999999999999999999999999999999999999999999999999999988888887
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+++.+++.|++.|++.+...+...+++.++++++++++.++.......+|..++|.+++++.+.+|||+.|++.+++.++
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLL 172 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 78889999999999988888888899999999998999999998889999999999999999999999999988777766
Q ss_pred HHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 376 WFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL 455 (615)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~ 455 (615)
..++.+...++++++ ++ +++ ..+++++++++.++...+...+.......+..+.|.++++ +
T Consensus 173 ~~~~~~~~~~~~~~~-~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~ 233 (401)
T PRK11043 173 LILPTLRLKPSKKAR-KQ--SQD---------------ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-M 233 (401)
T ss_pred HHHHHHHcCCCCCcc-cc--chH---------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-c
Confidence 655544433322211 10 000 1145667788887766665555555666677788998876 7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH-HHHHHHHhh
Q 007159 456 KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQG 534 (615)
Q Consensus 456 g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ 534 (615)
|++..+.++.+....++..++.++.+++.||+++++..... .....+......+............ +...+.+.+
T Consensus 234 g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (401)
T PRK11043 234 GYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL----LVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAA 309 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH----HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 99999999988888888899999999999999887643211 1111111111111111112222222 222333333
Q ss_pred hhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHH
Q 007159 535 SDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVF 590 (615)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f 590 (615)
.....+. ......+..|+++|++.|+.++....++.+++.+.|.+.+.......+
T Consensus 310 ~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 310 NGAIYPI-VVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHHH-HHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 3333333 333333334678999999999999999999999999998865444443
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=2.8e-28 Score=261.79 Aligned_cols=372 Identities=13% Similarity=0.146 Sum_probs=264.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
+..+..+++.++...+......+..|.+.+++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 44455566666777788888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-C--
Q 007159 286 TVLTP---VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-K-- 359 (615)
Q Consensus 286 ~~l~~---~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~-- 359 (615)
.+++. +++ +++.++++|+++|+|.+...+..+.++.++.+++++...+++.+....+|..+|+.+++.+.. .
T Consensus 105 ~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~ 182 (438)
T PRK10133 105 AALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP 182 (438)
T ss_pred HHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 98753 444 788999999999999999999999999998777777778999999999999999999876541 0
Q ss_pred -----------------------CCchHHHHHHHHHHHHHHHHH-HhhhcCCCCCCccccHHHHhhhhcCCccccccccc
Q 007159 360 -----------------------FGWPSVFYSFGSLGSIWFALW-LKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVI 415 (615)
Q Consensus 360 -----------------------~gw~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (615)
.+||++|+....+..+..++. ....++.+.+ +. .++.. .....
T Consensus 183 ~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~-~~-~~~~~-----------~~~~~ 249 (438)
T PRK10133 183 HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD-NH-SDAKQ-----------GSFSA 249 (438)
T ss_pred ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc-ccccc-----------cchhh
Confidence 245666654443333222222 2222221111 00 00000 00012
Q ss_pred cHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccH
Q 007159 416 PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY-NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (615)
Q Consensus 416 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~-~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~ 494 (615)
.+++++++|.++...+..++..........|++.|+ ++.+|+++.+.++.+....++.++++++.+++.||+++++...
T Consensus 250 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~ 329 (438)
T PRK10133 250 SLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA 329 (438)
T ss_pred hHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 345678888888777777777777787888999885 5678999999999999999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHH
Q 007159 495 TAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 574 (615)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp 574 (615)
... .++. ..+.+.... .. ......+.+++.+.....+. ......+..+++.+.+.++.. ...+|+.++|
T Consensus 330 ~~~-----~~~~--~~~~~~~~~-~~-~~~~~~~~l~glg~~~i~P~-~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~ 398 (438)
T PRK10133 330 AYA-----LIAM--ALCLISAFA-GG-HVGLIALTLCSAFMSIQYPT-IFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVT 398 (438)
T ss_pred HHH-----HHHH--HHHHHHHHc-CC-hHHHHHHHHHHHHHHHHHHH-HHHHHHcccchhhccchhHHh-HHhccchHHH
Confidence 221 1111 111111111 12 22233333444444444444 444444444556788888876 4557899999
Q ss_pred HHhhheeccCC-hhHHHHHHHHHHHHHHHH
Q 007159 575 AATGYILQRGS-WDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 575 ~l~G~l~~~~g-~~~~f~~~~~~~l~~~l~ 603 (615)
++.|.+.|..| .+..|++..++.+.....
T Consensus 399 ~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 399 PVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 99999999877 778887665555444433
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=5e-28 Score=256.93 Aligned_cols=269 Identities=16% Similarity=0.197 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
+...++..+....+...+.+++|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||++++.+.++..++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 34445555566666667778999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHH
Q 007159 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (615)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~ 368 (615)
+.+++ +++.+++.|++.|++.+...+...+++.+++|+++|++++++.+....+|..++|.+++.+.+..+|++.|++
T Consensus 85 ~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~ 162 (392)
T PRK10473 85 CSLAE--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYT 162 (392)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHH
Confidence 88877 7788899999999999999999999999999999999999999999999999999999998888999999998
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
.+++.++..++.....+++++++++..... ....++.++++.++...+...+.......+..+.|
T Consensus 163 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (392)
T PRK10473 163 MAAMGILVLLLSLFILKETRPARAPAASSK---------------PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSP 227 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccCCccch---------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 887766665554444433322211100000 01234456777776655555544444555666778
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~ 494 (615)
.++++.+|++..+.+.+.+...++.+++.++.+++.||+++|+...
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~ 273 (392)
T PRK10473 228 VLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLML 273 (392)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 8888888999999999999999999999999999999999886443
No 53
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=2.9e-28 Score=257.76 Aligned_cols=362 Identities=10% Similarity=0.001 Sum_probs=262.2
Q ss_pred HHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHH-HHHHHH-HHH
Q 007159 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVI-WWSVAT-VLT 289 (615)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~-l~~i~~-~l~ 289 (615)
+.+.++..+.......|++|.+.+++|+|..++|++.+++.+...++++++|+++||+||+........ ...+.. .++
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 334455666667778899999999999999999999999999999999999999999998543322211 111111 223
Q ss_pred HhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHH
Q 007159 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (615)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~ 369 (615)
..++ +++.+++.|+++|.+.+...|...++..++ +++|++++|......++|.++||++++++.+++|||+.|++.
T Consensus 89 ~~~~--~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 89 AGAH--NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred Hhhh--hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 3445 788899999999999988889988887654 578899999999999999999999999999999999999877
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
+++..+..+ .....++.++++++. +++ .....++++++++|++|.+.+..++...+...+.++.|.
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 165 TAGLAFMLI-GFLIKPTIPPKDAIP-EDE------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred HHHHHHHHH-HHHcCCCCCCCcccc-ccc------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655333322 222222211111110 000 001124567889999999998888888888889999999
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHH-HH
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAV-LC 528 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~ 528 (615)
|+++ +|.+....|.++....++.+++..+.+++.||++.++.+. ++.+...+........+..+.++ ..
T Consensus 231 ~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~---------~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 231 YWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLL---------ISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHH---------HHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 9987 8999999999999999999999999999999999885432 22223222222223344444333 44
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHH-HHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 529 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT-AGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~-~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
.+.+..+....+....... +.+++++++..++++. ...+|..++|.++|++.|+.|+ ..|.+++++.++++++
T Consensus 301 ~l~g~~~~~~~~~~~~~i~-~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIA-AQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 4444444444444433444 4477888999999874 5689999999999999999986 7788888877766544
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.3e-28 Score=260.97 Aligned_cols=366 Identities=21% Similarity=0.303 Sum_probs=261.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
++|+.+..+++..+....+.....+..|.+.+++|.+..+++++.+++.++..++.++.|+++||+|||+++..+.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 45666777777777777777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
++.++..+++ +++.+++.+++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++++.+..||+
T Consensus 94 ~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 94 VFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 9988888887 78889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHH----Hhhhh---c-C---Cc----cccccccccHHHHhh---hhh
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE----KRHIL---G-G---SI----SKEAVSVIPWKLILS---KAP 425 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~-~---~~----~~~~~~~~~~~~l~~---~~~ 425 (615)
+.|++.+++..+..++.....++.++...+.+.++ .++.. . . .. .+.......++.+++ .+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARI 251 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHH
Confidence 99998765555555444444443322110000000 00000 0 0 00 000000111222222 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHH
Q 007159 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 505 (615)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~ 505 (615)
.+.+.+..++..........++| ++.+.+|++..+.+.......++.+++.++.+++.||+++++... .....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~ 325 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-----LLLLGA 325 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-----HHHHHH
Confidence 34444445555566667777888 444558999999999999999999999999999999998872111 111111
Q ss_pred HHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhe
Q 007159 506 FLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 580 (615)
Q Consensus 506 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l 580 (615)
. ....+.. ...+.....+..++.+.+.....+.......+..++++||++.|+.+.+..+|..+||.+.|++
T Consensus 326 ~--~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 326 V--FAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred H--HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 1 1111111 1222223333344444444444444444556667789999999999999999999999999986
No 55
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=4.3e-28 Score=252.08 Aligned_cols=345 Identities=28% Similarity=0.464 Sum_probs=283.6
Q ss_pred HHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 007159 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
+.+..+....+.....+..|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++..++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 34455666777888888999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~ 371 (615)
.+ +++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..++|.+++.+.+..+|++.|++.++
T Consensus 84 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 84 AS--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred hc--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 87 7888999999999999999999999999999999999999999999999999999999999998899999998887
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
+.++..++..... |.++...+..++..........+.|.+.
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYL 202 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7666555544332 3456667777777888888889999999
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccHHHHHHHHHHHHHHHHHHHHHHhcccc-chHHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVR-TPAMAVLCM 529 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~ 529 (615)
.+.+|.+..+.+.......++..++.++.+++.||+++|+ ....+ ..............+ .....+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (352)
T cd06174 203 QEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG---------LLLAALGLLLLALAPSLALLLVALL 273 (352)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH---------HHHHHHHHHHHHHhccHHHHHHHHH
Confidence 9877999999999999999999999999999999999986 43321 111111111111222 223333444
Q ss_pred HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHH
Q 007159 530 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
+.+.+.....+.......+..++++|++..|+.+....++..++|.+.|.+.+..+|+..+.+.+++.+++.++...
T Consensus 274 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 274 LLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 44444444444445556666777999999999999999999999999999999999999999999998887776543
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=4.9e-28 Score=257.37 Aligned_cols=366 Identities=14% Similarity=0.125 Sum_probs=255.8
Q ss_pred HHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhcc
Q 007159 217 LLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~ 295 (615)
++.........+.++. +.+++|+|..++|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~-- 97 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH-- 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc--
Confidence 3333444444555554 6789999999999999999999999999999999999999999999999999999988877
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+++.+++.|++.|++.+...+...+++.+++|+++|++++++......+|..+||.+++++. .+||++.|++.+++.++
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVL 176 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 78889999999999999889999999999999999999999999999999999999999998 68999999988776665
Q ss_pred HHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 376 WFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL 455 (615)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~ 455 (615)
..++.....++.+++ +. .+ + ....++.++++++++...+..+...........++|.|+++..
T Consensus 177 ~~i~~~~~~~~~~~~-~~-~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 239 (400)
T PRK11646 177 AAAFNAWLLPAYKLS-TV-RT-P--------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIA 239 (400)
T ss_pred HHHHHHHhCCccccc-cc-ch-h--------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhc
Confidence 544433333321111 00 00 0 0114566778888776655554444444445668899998864
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH-HHHHHHHh
Q 007159 456 KFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQ 533 (615)
Q Consensus 456 g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 533 (615)
+ ++.+.+.+++...++..++....+++.|| ++.++... . +....++....+...+..... +...+.+.
T Consensus 240 ~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-------~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 309 (400)
T PRK11646 240 G-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLM-------A--GLLIMSLSMFPIGMVSNLQQLFTLICLFYI 309 (400)
T ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH-------H--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4 77888888888777666555555665554 44332111 1 111111111111122223222 22223333
Q ss_pred hhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccC---C-hhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 534 GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG---S-WDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~---g-~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+.....+.......+..+++++|++.|+.+....+|..+||.+.|++.|.. + ....++..+++.+++.+......|
T Consensus 310 g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (400)
T PRK11646 310 GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFS 389 (400)
T ss_pred HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333444556677899999999999999999999999999999873 2 456666666666666655554444
Q ss_pred CCc
Q 007159 610 GER 612 (615)
Q Consensus 610 ~~k 612 (615)
++|
T Consensus 390 ~~~ 392 (400)
T PRK11646 390 QKR 392 (400)
T ss_pred hch
Confidence 443
No 57
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=9.4e-28 Score=254.84 Aligned_cols=361 Identities=16% Similarity=0.097 Sum_probs=239.8
Q ss_pred HHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHH-HHHHHHHhhHHhhhhcCCchHH-HHHHHHHHHHHHHHHhh
Q 007159 216 FLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVL-GFGVIWWSVATVLTPVA 292 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l-~~~l~~~~~G~l~Dr~Grk~~l-~~~~~l~~i~~~l~~~~ 292 (615)
.++.......+.+.++. +.+++|++..++|++.+...+ ++.++++++++ .||+|+|+.+ +.+.++.+++.++.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 45555666666677666 578899999999999876655 55555555555 9999999875 45566666777777777
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccch--hhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER--SRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~ 370 (615)
+ +++.+++.+.+.|...+...|...+++.++.++++| +...++...+.++|.++||++++++.+++|||+.|++.+
T Consensus 103 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 103 R--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred h--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 6 666666665555555567778888888888766555 344578888999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 371 SLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK-APVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
++.++..+++....++.+++++... .+.+ .. .++ +..+......++.......+..+.|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLAT-GTLE---------------AP---RRNRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCcccc-cccc---------------cc---ccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666555544444332221110 0000 00 011 12233333334444445556678999
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM 529 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 529 (615)
|+++.+|++..+.+.+.....++.+++.++.|++.||+++|+...... . ... . .+.... ..+.+...+...
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~--~---~~~-~-~~~~~~--~~~~~~~~l~~~ 312 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAA--V---AGV-C-FYAGML--MAHSPAILLGLQ 312 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH--H---HHH-H-HHHHHH--HHhhHHHHHHHH
Confidence 998889999999999888877888889999999999999986433211 0 111 1 111111 112233222222
Q ss_pred HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 530 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
++.....+...........+..|+++|++.++++...++|..++|.++|++.|..||+.+|.+.+++.+++.++.+..
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222222222333445567799999999999999999999999999999999999998888888877766655
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=6.1e-28 Score=256.03 Aligned_cols=371 Identities=12% Similarity=0.054 Sum_probs=259.3
Q ss_pred HHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 007159 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
+++..++..++...+....+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++.+.++.+++.+++.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 34555666665555666677778999999999999999999999999999999999999999999999999988887776
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~ 371 (615)
.. +. ++.|+++|++.+...|+..+++.|++|+++|++++++......+|.++||.++|++.+. .|+..+++.+.
T Consensus 88 ~~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 88 GI--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred HH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 65 32 67899999999999999999999999999999999999999999999999999999885 47777766555
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
+.++..+.. ...++.+.++++.+.+... ... .....++.++++|.+.......++...........+|.|+
T Consensus 162 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK11195 162 IYLLAALFN-LFIPRLGARRPGQSWNPIA-LLR-------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWA 232 (393)
T ss_pred HHHHHHHHH-hcCCCCcccccccCCCHHH-HHH-------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333322 2233222111110000000 000 0001245567777766555544444455555666778888
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH-H
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM-A 530 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 530 (615)
++.+|.++.+.|++.....++.+++.++.+++.||.++++....+. ..+ .........+.++..+... +
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-----~~~-----~~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-----LMG-----LVVLLMALQHSLLPAYPLLIL 302 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-----HHH-----HHHHHHHHHhHHHHHHHHHHH
Confidence 8889999999999999999999999999999999887765332111 111 1111111122333333333 3
Q ss_pred HHhhhhhhhhhhhhhhhhccCcc-h-hhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 531 CSQGSDAFSQSGLYSNHQDIGPR-Y-AGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
.+.+......+ .....++.+|+ . +|++.++.++..+++..++..+.+.+ +..|.+..+.+.+...+++..+.+.++
T Consensus 303 ~G~~~g~~~~~-~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 303 IGALGGFFVVP-MNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHhhhhhhhh-HHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333 33333445554 3 69999999999999999999999966 667888888877777666666655554
Q ss_pred c
Q 007159 609 T 609 (615)
Q Consensus 609 ~ 609 (615)
.
T Consensus 381 ~ 381 (393)
T PRK11195 381 W 381 (393)
T ss_pred H
Confidence 3
No 59
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=6.9e-28 Score=262.79 Aligned_cols=399 Identities=15% Similarity=0.169 Sum_probs=257.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhc--------CCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF--------NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG 276 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~ 276 (615)
.++.++++.++.+..+++...+++..+.+.+++ +.+..+.+++.+++.++.+++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 355666667777888889898998888888877 888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh---------c-cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHH
Q 007159 277 FGVIWWSVATVLTPVAA---------R-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGS 346 (615)
Q Consensus 277 ~~~~l~~i~~~l~~~~~---------~-~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~ 346 (615)
++.++++++.++++++. + ..++.+++.|+++|++.+...+...++++|++|+++|++++++...+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 99999998888776531 1 1246678999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHhhhh--------cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCc-cccHHHHh---hhhcCCcccccccc
Q 007159 347 VTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEEKR---HILGGSISKEAVSV 414 (615)
Q Consensus 347 ~ig~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~ 414 (615)
++++.+++.+. +.+|||+.|++.++..++..+..+ ..++.++... +.+.++.. ....+.... ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~-~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLY-FVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQAL 247 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHH-cCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHH
Confidence 99988776543 457999999987766666544433 3444332100 00111100 000000000 0000
Q ss_pred ccHHHHhh-----hhhHHHH-----H----HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 415 IPWKLILS-----KAPVWAL-----I----ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 480 (615)
Q Consensus 415 ~~~~~l~~-----~~~~~~~-----~----l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~ 480 (615)
.+.+...+ .+.++.. . ...+....+......+.|.++++ .|++....++.....++..+++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 248 QEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 01111111 0111110 0 01111111223334456776655 78888777777777888889999999
Q ss_pred HHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhh-hhhhhhhhhhhccCcchhhHHH
Q 007159 481 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDA-FSQSGLYSNHQDIGPRYAGVLL 559 (615)
Q Consensus 481 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~ 559 (615)
+++.||+++|+.+..+. ....++.+... .................+.+.+... ..+.......+..+++.|+++.
T Consensus 327 g~l~dr~g~r~~~i~~~--~~~~v~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 402 (479)
T PRK10077 327 IMTVDKFGRKPLQIIGA--LGMAIGMFSLG--TAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKAL 402 (479)
T ss_pred HHHHHHhcChHHHHHhH--HHHHHHHHHHH--HHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHH
Confidence 99999999886544322 11111111111 1111111111222222222222222 1223334455566779999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh------eeccCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 560 GLSNTAGVLAGVFGTAATGY------ILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 560 gl~~~~~~lg~~igp~l~G~------l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
|+.+.+..++..+++.+.+. +.+..++...|++.+++++++.++.+.+.++
T Consensus 403 g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 403 AIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999988666554 4466788888888887777776665544443
No 60
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=6.3e-27 Score=254.82 Aligned_cols=378 Identities=14% Similarity=0.160 Sum_probs=267.3
Q ss_pred HHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-----CCchH-HHHHHHHHHHH
Q 007159 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKPV-LGFGVIWWSVA 285 (615)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-----Grk~~-l~~~~~l~~i~ 285 (615)
.++..+..+.........+|.+.++.|.+..++|.+ +.....+ ++.+++|+++||+ |||+. +..+.++.+++
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~ 94 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH
Confidence 344445566777778888999999999999999997 4444444 6889999999999 99885 66777777777
Q ss_pred HHHHHhhh-ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCCch
Q 007159 286 TVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWP 363 (615)
Q Consensus 286 ~~l~~~~~-~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~gw~ 363 (615)
.+++++.+ ..+++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..|||
T Consensus 95 ~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr 174 (491)
T PRK11010 95 IAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQ 174 (491)
T ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHH
Confidence 77766653 23577788899999999999999999999999999999999999999999999999999999998 57999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 443 (615)
..|++.+++.++..+..+. .+++++..+..+..+. ....+++++++++..|...+..++........
T Consensus 175 ~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~~~------------~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~ 241 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLL-APEPTDTIPVPKTLEQ------------AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFA 241 (491)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCccccccccchhh------------hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH
Confidence 9999988776665544443 3332211110000000 00124566777777777666666666666677
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 444 LTWMPTYYNQVLKFNLTESGLFCV-LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 444 ~~~~p~~~~~~~g~s~~~~g~~~~-~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
..+.+.|+.+.+|++..+.+.+.. ...++.+++.+++|++.||+++++...... ....+. ...+..+... ....
T Consensus 242 ~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~--~l~~l~--~l~~~~l~~~-~~~~ 316 (491)
T PRK11010 242 MSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFG--ILQGVS--NAGYWLLSIT-DKNL 316 (491)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--HHHHHH--HHHHHHHHhc-cccH
Confidence 778888887778999999999874 556789999999999999999875432111 000111 1111111111 1222
Q ss_pred HHHHHHHHH-HhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHH
Q 007159 523 AMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 523 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~ 601 (615)
..+....++ ....+..............+++..++..|+.+.+..+|..+++++.|++.|..||...|.+.+++++.+.
T Consensus 317 ~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 317 YSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 222212222 1111111122223334455677889999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhc
Q 007159 602 LVWNLFAT 609 (615)
Q Consensus 602 l~~~~~~~ 609 (615)
++....++
T Consensus 397 ~~~~~~~~ 404 (491)
T PRK11010 397 LLLLVCRQ 404 (491)
T ss_pred HHHHHHHh
Confidence 77766643
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.2e-27 Score=252.58 Aligned_cols=365 Identities=15% Similarity=0.172 Sum_probs=261.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
++.+++.++..++......+..|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||++++++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34455566666777788889999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhhh-ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC--------
Q 007159 289 TPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------- 359 (615)
Q Consensus 289 ~~~~~-~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-------- 359 (615)
+..+. ..+++.+++.|++.|+|.+...+..+.++.++.|++++++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 65432 236888999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHh
Q 007159 360 ------------------FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLIL 421 (615)
Q Consensus 360 ------------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 421 (615)
.+||++|++.+++.++..+++.+... ++.++++.++.. .....+.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~-p~~~~~~~~~~~--------------~~~~~~~~~ 229 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKM-PALNHSDAKQIS--------------FSASLSRLA 229 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcccccccc--------------chhhHHHHH
Confidence 35999999888876665544432221 111111000000 001334577
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHH
Q 007159 422 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL-KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKI 500 (615)
Q Consensus 422 ~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~-g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~ 500 (615)
++|.++...+..+++........++++.|.++.. +.+....+.+.+....+..+|+++++++.||+++++.+..
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i----- 304 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMA----- 304 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH-----
Confidence 8888888888888887778788899999987632 4444455556667778889999999999999988864321
Q ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhe
Q 007159 501 MQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 580 (615)
Q Consensus 501 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l 580 (615)
...... +..+.....+.....+.+.+++.+...+++.......+..+++....+.++... .+|+.+.|++.|++
T Consensus 305 ---~~~~~~-~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 305 ---YAIIGM-ALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFI 378 (410)
T ss_pred ---HHHHHH-HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHH
Confidence 111111 111111122222334445555555555555444445555555544334444333 39999999999999
Q ss_pred eccC------ChhHHHHHHHHHHHH
Q 007159 581 LQRG------SWDDVFKVAVVLYII 599 (615)
Q Consensus 581 ~~~~------g~~~~f~~~~~~~l~ 599 (615)
.|.. +++..|++..++.+.
T Consensus 379 ~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 379 IDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHhcccccCccchHHHHHHHHHHH
Confidence 9953 577888775555444
No 62
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.5e-27 Score=253.27 Aligned_cols=365 Identities=11% Similarity=0.090 Sum_probs=258.3
Q ss_pred HHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh
Q 007159 214 SAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~ 292 (615)
+..++.........+.+|. +.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 3444455566666666655 567899999999999999999999999999999999999999999999999988888888
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~ 372 (615)
+ +++.+++++++.|.+.+...+...++..|..++++|++++++.....++|.++||.+++++.+ .+|++.|++.+++
T Consensus 94 ~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 94 N--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAIC 170 (395)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHH
Confidence 7 677788888888888888888899999999999999999999999999999999999999875 7999999987777
Q ss_pred HHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (615)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~ 452 (615)
.++..++.....++.++++++.+++. ...++.+++|.++.+.+..++..+.......+.+.|..
T Consensus 171 ~~i~~i~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 234 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKAIATETGSV----------------WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVM 234 (395)
T ss_pred HHHHHHHHHHHHhccccccccchhhh----------------hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 66654444333322211111100000 01245678888888877777766666666667777765
Q ss_pred HH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Q 007159 453 QV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMA 530 (615)
Q Consensus 453 ~~--~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 530 (615)
.. .+.+....+.++....+.........|++.||.++|+....+ ..+.............+.+.+.+....
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (395)
T PRK10054 235 VVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAG-------TLCFVIGLVGFIFSGNSLLLWGMSAAV 307 (395)
T ss_pred HhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHH-------HHHHHHHHHHHHHcchHHHHHHHHHHH
Confidence 43 355566677777777777777778889999999887543211 111111111111111122222333333
Q ss_pred HHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 531 CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
.+.+.....+.......+..+++.++++.+..+ ...+|..+||.++|++.|+.|+...|++.+++..++.++..
T Consensus 308 ~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 308 FTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 333333333333333445567788899988765 67799999999999999999999999887776666555444
No 63
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=3.6e-27 Score=249.46 Aligned_cols=357 Identities=11% Similarity=0.078 Sum_probs=250.8
Q ss_pred HHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCc----hHHHHHHHHHHHHHHHHHh
Q 007159 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK----PVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk----~~l~~~~~l~~i~~~l~~~ 291 (615)
++........+.+.+|.+.+++|.|..++|++.+++.++..++++++|++.||+||+ +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445567788899999999999999999999999999999999999999999984 3332222221 1122222
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~ 371 (615)
.+ +++.+++.|++.|++.+...+...+++.++ +++|+++++......++|.++||++++++.+++|||..|++.++
T Consensus 91 ~~--~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 AH--SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred cc--cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 33 688888999999999999999888888876 45688888999999999999999999999999999999987776
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
..++..+... ..++.++++++ ++ . ......++++++++|.+|.+.+..++..........+.|.|+
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~~~-~~-~-----------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (382)
T PRK11128 167 GVASMLLGQL-LRPTIMPQGES-RQ-Q-----------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW 232 (382)
T ss_pred HHHHHHHHHH-ccCCCCCcccc-cc-c-----------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 5444433332 22221111110 00 0 000113577889999999888877777777777888889999
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMAC 531 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 531 (615)
++ .|++..+.|.+.+...++.++..++.+++.||+++++.+.. +....++........+.++..+...++
T Consensus 233 ~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 233 QA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL---------SAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---------HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 76 79999999999998889899999999999999998864321 122222222222223444433333333
Q ss_pred HhhhhhhhhhhhhhhhhccCcchhhHHHHHHH-HHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 532 SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN-TAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~-~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
.+.......+.......+.+++++++..++.+ ....+|..+||.++|.+.|..|+ ..++..+++.+++.++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 33333333444444444456777788899886 44577889999999999999887 4666666666555443
No 64
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=1.2e-26 Score=251.11 Aligned_cols=378 Identities=16% Similarity=0.166 Sum_probs=287.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
+-.++++.+++.++..+...+.+.+..++.-|+..++++.++..+..++..+++|.++||++||++++.+.++.++..++
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 44456677778888888888999988888889999999999999999999999999999999999999999887765544
Q ss_pred HHh---hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH
Q 007159 289 TPV---AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (615)
Q Consensus 289 ~~~---~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~ 365 (615)
.++ ....+.+.+++.-++.|++.+...|+..+++.++.|+++...++++.+...++..++||.++|.++..+|-.++
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 332 33346788899999999999999999999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007159 366 FYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 445 (615)
Q Consensus 366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 445 (615)
|++.++..++....+...+++.+++ +..++.-.... ...++.+.++|.+...++..++.++....+..
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~-~~~~e~~~~~l-----------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a 239 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPS-SLPRERFFSAL-----------REGLRYVRSSPPLRSVLLRSFLFNLFASAVWA 239 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccccccc-ccchhhhhhhH-----------HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHH
Confidence 9988776665544444333322211 11111100000 11456666777777666666666666666777
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 525 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 525 (615)
.+|.+.++.+|.++...|++.+..++|+++|.++.+++.+|+++++.+. .+.+..++.+..+...+..+..
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~---------~~~~~~a~~~~~lal~~~~~~~ 310 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVL---------LASLLFALALLLLALSPSFWLA 310 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhH---------HHHHHHHHHHHHHhcchHHHHH
Confidence 8899999999999999999999999999999999999998887765332 2222233333333444455544
Q ss_pred HHHHHHHhhhhhhhhhh-hhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHH
Q 007159 526 VLCMACSQGSDAFSQSG-LYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 526 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~ 604 (615)
...+++.+......... ........|++.+|++++++.++...+..+|.++.|.+.+..|...++.++++..+++.++.
T Consensus 311 ~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 311 LIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444333 34456667889999999999999999999999999999999999999988887777766665
Q ss_pred HHH
Q 007159 605 NLF 607 (615)
Q Consensus 605 ~~~ 607 (615)
...
T Consensus 391 ~~~ 393 (524)
T PF05977_consen 391 LRF 393 (524)
T ss_pred HHh
Confidence 544
No 65
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=6.2e-26 Score=241.67 Aligned_cols=373 Identities=13% Similarity=0.084 Sum_probs=257.5
Q ss_pred HHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-----CCch-HHHHHHHHHHHHH
Q 007159 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKP-VLGFGVIWWSVAT 286 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-----Grk~-~l~~~~~l~~i~~ 286 (615)
+..++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| +++++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44566777888888889999999999999999999776665 68999999999999 7765 7888888888877
Q ss_pred HHHHhhhc-cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC-CCchH
Q 007159 287 VLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPS 364 (615)
Q Consensus 287 ~l~~~~~~-~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-~gw~~ 364 (615)
.++.+.+. .+++.+++..++.+++.+...++..+++.+++|+++|+++.++...+..+|.++++.+++.+.+. +|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 77777632 24666777878888888999999999999999999999999999999999999999999998885 59999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.|++.+++.++..+.... .++++.++++.++ ..++ ....+++++++|.++.+++..++.........
T Consensus 163 ~f~i~a~~~l~~~l~~~~-~~e~~~~~~~~~~-~~~~-----------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~ 229 (402)
T PRK11902 163 TYLLMAGLMLAGALTTLW-APEPEVPARPPRS-LGEA-----------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAG 229 (402)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCcccccccch-hHHH-----------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHH
Confidence 999888776654443332 2322221111100 0000 11256778889888887777666655544444
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcc-ccch
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPW-LTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH-VRTP 522 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~-i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 522 (615)
.+.+.++.+.+|+++.+.+++....+ ++.+++.++++++.||+++++..... .+......+.+..... .+..
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~------~~~~~l~~l~~~~~~~~~~~~ 303 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLF------GVLQAVSNLGYWVLAVTPKHL 303 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHHHHHHHHHHHHHhcCCcH
Confidence 55566677778999999999876654 46889999999999999988643211 1111111111111111 2232
Q ss_pred HHHHHHHH----HHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHH
Q 007159 523 AMAVLCMA----CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYI 598 (615)
Q Consensus 523 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l 598 (615)
+.++.... +.+............+.+ .+..++..++.+.+..++..++++++|.+.|..||...|.+.+++++
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~ 380 (402)
T PRK11902 304 WTMALAIGIENLCGGMGTAAFVALLMALCN---RSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIAL 380 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 33332221 222222222222222332 22334455666777778888778899999999999999999999888
Q ss_pred HHHHHHHHHhc
Q 007159 599 IGTLVWNLFAT 609 (615)
Q Consensus 599 ~~~l~~~~~~~ 609 (615)
++.++.....+
T Consensus 381 ~~~~~~~~~~~ 391 (402)
T PRK11902 381 PGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHhh
Confidence 88776655443
No 66
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=7.3e-29 Score=251.47 Aligned_cols=378 Identities=16% Similarity=0.214 Sum_probs=281.5
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
++.++.++++++..++..++.+.+....+.+.+.+|++++..|++.+.+.+.++++.|++|+++|||+||+++.+|..++
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 34467778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g- 361 (615)
.++.++++++. .+|+++++|.+.|+|.+...|+++++++|.+|+++|++.+++++.+..+|..+|.+.+..+.+..+
T Consensus 109 ~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 109 TLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999997 789999999999999999999999999999999999999999999999999999999999988776
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHH
Q 007159 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTF 441 (615)
Q Consensus 362 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 441 (615)
|||.|+..+++.++..++.+...+++++...++.+.+.. ..........+.+.+.+++.+....+......+...
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~G 261 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIG 261 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----CCCCccchHHHHHHHHccCceeeehHHHHHHHHhcc
Confidence 999999999999888888777776665432211111100 011122223456666666777666666666666666
Q ss_pred HHHHHHHHHHHH---HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--HHHHHHHHHHHHHHHHHHHHHHh
Q 007159 442 ILLTWMPTYYNQ---VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS--ITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 442 ~~~~~~p~~~~~---~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
.+..|.|.+... ..|++.....++..+...++.+|.+++|.++||+.+.... ...........+....+.++...
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~ 341 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLF 341 (493)
T ss_pred ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHH
Confidence 666677766543 3455656666777788888999999999999996543221 11112233333333333333222
Q ss_pred cc--ccchHHHHHHHHHHhhhhhhhhhhhh-hhhhccCcchhhHHHHHHHHHHHHHH-HHHHHHhhheecc-CChh
Q 007159 517 SH--VRTPAMAVLCMACSQGSDAFSQSGLY-SNHQDIGPRYAGVLLGLSNTAGVLAG-VFGTAATGYILQR-GSWD 587 (615)
Q Consensus 517 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~gl~~~~~~lg~-~igp~l~G~l~~~-~g~~ 587 (615)
.. ....+..+.+++++.......+.... ...+.++|+.|.++.++...+..+.+ +-+|.+.|.+.|+ .||+
T Consensus 342 ~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 342 PAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 22 22333444444444444444444333 35566789999999999888876655 4455599999987 4555
No 67
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=4.5e-27 Score=246.91 Aligned_cols=347 Identities=16% Similarity=0.197 Sum_probs=241.9
Q ss_pred HHHHHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH
Q 007159 211 LCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (615)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~ 289 (615)
.+++.++........+.+..|. +.+++|++..+++++.+++.+++.++++++|+++||+|||++++++.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3555666667777888899995 889999999999999999999999999999999999999999999999999999888
Q ss_pred HhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc----------C
Q 007159 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----------K 359 (615)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~----------~ 359 (615)
++++. +++.+++.|++.|++.+. .+....++.+++|+++|++++++......+|..+++.+++.+.. .
T Consensus 85 ~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 GLAVQ-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHhh-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 87752 567788999999999654 56678899999999999999999998888888888777766654 3
Q ss_pred CCchHHHH-HHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHH
Q 007159 360 FGWPSVFY-SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (615)
Q Consensus 360 ~gw~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 438 (615)
.+||+.|+ ..+++..+..++.+...++.++++++..+.+.+ +.....+.......++.+++++++.+.+..++...
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFG 239 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHH
Confidence 48999994 435444444443333333332221111100000 00000000011144567788888888877777777
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007159 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH 518 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 518 (615)
.......++|.|+++.+|+++.+.+.+..+..+..++++++.|++.||+++|+..... .........++....
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~-------~~~~~~~~~~~~~~~ 312 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMS-------FLGVAMGAFLVVLGL 312 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHH-------HHHHHHHHHHHHhcC
Confidence 7778888999999998999999999999999999999999999999999998643321 111111122222112
Q ss_pred cc--chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHH
Q 007159 519 VR--TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLA 569 (615)
Q Consensus 519 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg 569 (615)
.. .....+..........+...........+..|+++|++.|+.+...++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 313 VSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred CCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 21 2322222222222222333333444444556789999999999887765
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=4.4e-27 Score=246.23 Aligned_cols=331 Identities=11% Similarity=0.128 Sum_probs=240.0
Q ss_pred hHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHH
Q 007159 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIM 303 (615)
Q Consensus 224 ~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~ 303 (615)
..+++.+|.+.+++|++..++|++.+++.+++.++.++.|++.||+|+|+++.++.++..++.+++ ..+ +.+.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999998888887766 555 67788999
Q ss_pred HHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC--CchHHHHHHHHHHHHHHHHHH
Q 007159 304 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 304 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~ 381 (615)
|++.|++.+...+....++.++++ ++|++++++...+..+|..+++.+++.+.+.. +||+.|.+.+++.++....+.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~ 172 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWI 172 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888888999985 68999999999999999999999999887765 399998876655443332222
Q ss_pred hhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Q 007159 382 KKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE 461 (615)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~ 461 (615)
...+++++ ++.. ......++++++|.++.+.+..++....++....++|.|+++ +|++..+
T Consensus 173 ~~~~~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~ 233 (355)
T TIGR00896 173 PQVRRRVA--ANQT----------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAAT 233 (355)
T ss_pred hhhccccC--CCCC----------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 11111110 0000 000123446778888877776666677778888899999987 6999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhh
Q 007159 462 SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQS 541 (615)
Q Consensus 462 ~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (615)
.+.+.+...++.++++++.|++.||++.++... .....+...+............. ....+.+.+.....+.
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQRGIV------AVLAVLQLVGLCGLLFAPMHGLW--AWALVLGLGQGGAFPL 305 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHH------HHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHhhhhHhHH
Confidence 999999999999999999999999996553221 11111111111111111111111 1223333333333333
Q ss_pred hhhhhhhccC-cchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC
Q 007159 542 GLYSNHQDIG-PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 585 (615)
Q Consensus 542 ~~~~~~~~~~-~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g 585 (615)
......+..+ +++++...++.+.+..++..++|.+.|++.|+.|
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2333333333 4677999999999999999999999999998754
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=6.5e-27 Score=247.45 Aligned_cols=361 Identities=17% Similarity=0.167 Sum_probs=248.0
Q ss_pred HHhhhhhHHHHhHHHHHhhcC--CCchhhHHHHHH-----HHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHH
Q 007159 218 LCNMDRVNMSIAILPMSKEFN--WNSTTVGLIQSS-----FFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP 290 (615)
Q Consensus 218 ~~~~~~~~~~~~~~~i~~~~g--~s~~~~g~i~s~-----~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~ 290 (615)
..+++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 456777777877777777654 445566654443 3334456889999999999999999999999999999998
Q ss_pred hhhccC------hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhh-------
Q 007159 291 VAARIG------LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI------- 357 (615)
Q Consensus 291 ~~~~~~------~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~------- 357 (615)
++++.. ...+++.|+++|++.+...+...+++.|++++++|++..++...+..+|.++++.++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 84 LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 887321 1257889999999999999999999999999999999999999999999999998877653
Q ss_pred -cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhh--HHHHHHHHH
Q 007159 358 -QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP--VWALIISHF 434 (615)
Q Consensus 358 -~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~ 434 (615)
+.++||+.|++.+++.++...+.. ..++.++.+ .++++. .....++++.+++++ ++...+..+
T Consensus 164 ~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
T TIGR00883 164 LLEWGWRIPFLVSAVLVLIGLYLRR-NLEETPVFE---KAQEKH----------KKKRGPIRETLTKHRKPFLLGLGLVI 229 (394)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHH-hcCCChhHH---HHHhcc----------ccccCCHHHHHHhchHHHHHHHHHHH
Confidence 357899999876665544333222 222211110 000000 001124555666654 666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHH-HHH
Q 007159 435 CHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPA-FFL 513 (615)
Q Consensus 435 ~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~l 513 (615)
+.....+....++|.|+++.+|.+..+.+.......++..++.++.|++.||+++|+..... ........ ..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~------~~~~~~~~~~~~ 303 (394)
T TIGR00883 230 ATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIF------TVLAALLAVPLL 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH------HHHHHHHHHHHH
Confidence 66677777888999999888899999999999999999999999999999999988643211 11111111 111
Q ss_pred HHhccccchHHHHH-HHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHH-HHHHHHHHHHHHHHhhheeccCC-hhHHH
Q 007159 514 TQLSHVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLS-NTAGVLAGVFGTAATGYILQRGS-WDDVF 590 (615)
Q Consensus 514 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~-~~~~~lg~~igp~l~G~l~~~~g-~~~~f 590 (615)
.........+.... ..+.+.+.............+..+++.|+++.++. +....+|..++|.+.|++.|..| |...+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 304 MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 11111222333322 33333333334444444456667778999999985 45566888999999999999877 77666
Q ss_pred HHHHHHHH
Q 007159 591 KVAVVLYI 598 (615)
Q Consensus 591 ~~~~~~~l 598 (615)
+...++++
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 66555444
No 70
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=3.9e-26 Score=250.24 Aligned_cols=396 Identities=15% Similarity=0.151 Sum_probs=254.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhc-----CCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF-----NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFG 278 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~ 278 (615)
..+.++.++.++.+..+++...++...|.+..++ ..+..+.+++.+.+.++++++.+++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3456777777888889999999998888876642 34556789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcc----ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 279 VIWWSVATVLTPVAARI----GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 279 ~~l~~i~~~l~~~~~~~----~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
.++..++.++++++++. +++.++++|++.|++.+...+....+++|++|+++|++++++......+|.++++.++.
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877521 15789999999999999999999999999999999999999999999999999998877
Q ss_pred hhhc-----------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCC---Cccc-c-HHH-Hhhhhc-
Q 007159 355 ILIQ-----------------------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE---DPEL-R-AEE-KRHILG- 404 (615)
Q Consensus 355 ~l~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-~~~-~~~~~~- 404 (615)
++.. .++||+.|.+.++..++..++ ....|++|+- +.+. + ..+ ..+..+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 5532 247999997665555443333 3344554431 1111 0 000 000000
Q ss_pred ---CCcc-------ccccccccHHHHhhh---hhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH---
Q 007159 405 ---GSIS-------KEAVSVIPWKLILSK---APVWA----LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL--- 464 (615)
Q Consensus 405 ---~~~~-------~~~~~~~~~~~l~~~---~~~~~----~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~--- 464 (615)
.... ++.....++++++++ ++.+. ..+..++....+++...+.|.++++ .|++....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~ 330 (502)
T TIGR00887 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAY 330 (502)
T ss_pred ccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHH
Confidence 0000 000011246666542 12211 1222333334455666678888875 6876542211
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhh
Q 007159 465 ---------FCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGS 535 (615)
Q Consensus 465 ---------~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 535 (615)
...+..++.+++.++.+++.||+|||+....+. ....+++.+.++. .............++......
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~--~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~ 406 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGF--FILTVLFFVLGFA--YNHLSTHGFLAIYVLAQFFAN 406 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHH--HHHHHHHHHHHHH--HHhcchhHHHHHHHHHHHHHh
Confidence 123344566678889999999999997544321 1111111111111 000011111111111111111
Q ss_pred hhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc----------CChhHHHHHHHHHHHHHHHHHH
Q 007159 536 DAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR----------GSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~----------~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
.+..+.......+..|++.|+++.|+.+.+..++++++|.+.|++.+. .++...|.+.+++++++.+.++
T Consensus 407 ~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~ 486 (502)
T TIGR00887 407 FGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL 486 (502)
T ss_pred cCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHhe
Confidence 112222222345566779999999999999999999999999999884 3455677777777777665543
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.7e-27 Score=252.34 Aligned_cols=394 Identities=17% Similarity=0.232 Sum_probs=306.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
-|.+++..++..+........++.+.+.++++++.+..+++|+.++....+.+..|+.+.+.||+|.|.+.++|.++..+
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 37888888888777777777778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+.++.+++++. +..++...++.|+|.++.+.+...++..+| +++|+.++|+...+.++|.++-|.+..++.+.+|||+
T Consensus 124 g~~lssF~~~i-~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~ 201 (509)
T KOG2504|consen 124 GLLLSSFATSL-WQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRG 201 (509)
T ss_pred HHHHHHHHhhH-HHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHH
Confidence 99999999942 345566788999999999999999999998 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCcc--------------------ccHHHH------------hhhhcCCcccc--
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPE--------------------LRAEEK------------RHILGGSISKE-- 410 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~------------~~~~~~~~~~~-- 410 (615)
.+++.+.+.+-..+.....++..+...+. ....+. ....+......
T Consensus 202 ~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (509)
T KOG2504|consen 202 ALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNS 281 (509)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcccccc
Confidence 99998888766555555555422221111 000000 00000000000
Q ss_pred ccccccH---HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 411 AVSVIPW---KLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL 487 (615)
Q Consensus 411 ~~~~~~~---~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~ 487 (615)
..+.... .++++++.++.+.+...+...++.....++|.|..+ +|++..+++.++++.++..++++++.|++.|+.
T Consensus 282 ~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~ 360 (509)
T KOG2504|consen 282 PLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP 360 (509)
T ss_pred chhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc
Confidence 1111112 467889999999999999999999999999999995 799999999999999999999999999999998
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHH
Q 007159 488 VSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAG 566 (615)
Q Consensus 488 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~ 566 (615)
..++. .+..++++..++..+..+....+. +...+.+++...+...........+..+.++...+.|+...+.
T Consensus 361 ~~~~~-------~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 361 GIRAL-------VLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred ccchH-------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 85532 233333444444434444444444 3444444444444443333345667778899999999999999
Q ss_pred HHHHHHHHHHhhheeccCC-hhHHHHHHHHHHHHHHHHHHHHh
Q 007159 567 VLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 567 ~lg~~igp~l~G~l~~~~g-~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
.++..+||++.|++.|..+ |...|++++++.+++.+++++..
T Consensus 434 gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999865 99999999999999987776654
No 72
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=7e-27 Score=249.07 Aligned_cols=280 Identities=19% Similarity=0.312 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHh-HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIA-ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
.++..++..++....+...+.-+ +..+.++.+....+.+.+.++++++++++++++|.+.||++..+.+....+++++.
T Consensus 45 ~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 45 FILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 34444555566666666655533 44467899999999999999999999999999999999999988998888888888
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhh------cC
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI------QK 359 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~------~~ 359 (615)
.++..... +++.+++.|++.|+..+..+|....+++.|+.++||++.++++.+..++|.++|++++..+. ..
T Consensus 125 ~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 125 GFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 87777776 78999999999999999999999999999999999999999999999999999999998863 45
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHh----hhh--cCCccccccccccHHHHhhhhhHHHHHHHH
Q 007159 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR----HIL--GGSISKEAVSVIPWKLILSKAPVWALIISH 433 (615)
Q Consensus 360 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~ 433 (615)
.||||.|++.+++.++..++.++..|+.|.+..-..++++. ... ......+..+...+++.+++|.+|.+.+..
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHH
Confidence 78999999999999999988888888877754333333311 111 111111115567888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007159 434 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (615)
Q Consensus 434 ~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g 488 (615)
++.....+++.+|+|.|+.+..|++..+++.+.++..++++++.++.|+++||+.
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999966799999999999999999999999999999964
No 73
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=2.8e-26 Score=245.83 Aligned_cols=377 Identities=14% Similarity=0.060 Sum_probs=238.3
Q ss_pred HHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHH---
Q 007159 215 AFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP--- 290 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~--- 290 (615)
.+++.......+.+.++.+ .+++|+|..++|++.+++.++..++++++|+++||+|||++++++..+.+++.....
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444556666654 556999999999999999999999999999999999999999887666554433211
Q ss_pred hhhcc--C-hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHH
Q 007159 291 VAARI--G-LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (615)
Q Consensus 291 ~~~~~--~-~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~ 367 (615)
..... . +...++.+++.|.+.....+....+..+. .++++..++.......+|.+++|++++.+.+ .+|++.|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~ 174 (420)
T PRK09528 98 FAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFW 174 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHH
Confidence 11100 0 11122233344444333334444443322 3456778889899999999999999998876 58999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007159 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWM 447 (615)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 447 (615)
+.+++.++..++.+...++++++.+. ++++.. ++........+..+++|.++.+.+..++..........++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~ 246 (420)
T PRK09528 175 LGSGSALILLVLLFFAKPDAPSTAKV-ANALGA-------NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQF 246 (420)
T ss_pred HHHHHHHHHHHHHhcccccccchhhh-ccchhc-------ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHH
Confidence 87777666555554443333221110 000000 0011112234567788887766665555555555555677
Q ss_pred HHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 448 PTYYNQVL---KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 448 p~~~~~~~---g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
|.|+.+.+ +.+..+.|.+.++..++.+++.++.|++.||+++|+....+. .+......+. ...+.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-------~l~~~~~~l~--~~~~~~~~ 317 (420)
T PRK09528 247 PNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAG-------TIMAVRIIGS--GFATGPLE 317 (420)
T ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH-------HHHHHHHHHH--HhcccHHH
Confidence 88876643 566677889999999999999999999999999997543211 1111111111 12233333
Q ss_pred HHHHHHHHhhhhhh-hhhhhhhhhhccCcchhhHHHHH-HHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQGSDAF-SQSGLYSNHQDIGPRYAGVLLGL-SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 525 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~gl-~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
.+....+.+..... .........+..+++.+++..+. .++...+|..++|.+.|++.|..||+.+|.+.+++.++..+
T Consensus 318 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~ 397 (420)
T PRK09528 318 VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTL 397 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Confidence 33333332222222 22233334556777888887665 67778999999999999999999999999998888877766
Q ss_pred HHHHHhcCC
Q 007159 603 VWNLFATGE 611 (615)
Q Consensus 603 ~~~~~~~~~ 611 (615)
+.....+++
T Consensus 398 ~~~~~~~~~ 406 (420)
T PRK09528 398 ISVFTLSGD 406 (420)
T ss_pred HHHHHhcCC
Confidence 665554443
No 74
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=2.7e-26 Score=252.04 Aligned_cols=361 Identities=15% Similarity=0.093 Sum_probs=243.5
Q ss_pred HhHHHHHhhcCCC---chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 228 IAILPMSKEFNWN---STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 228 ~~~~~i~~~~g~s---~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
+..+.+.+|++++ ..+.+++.+++.++.+++.+++|+++||+|||++++++.++.+++.++.++++ +++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 5667899999999 89999999999999999999999999999999999999999999999998888 889999999
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhh
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 384 (615)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.++..++..+..+ ..
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~-~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSW-FV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHH-hc
Confidence 999999999999999999999999999999999999999999999998876654 99999988877666555543 33
Q ss_pred cCCCCC----CccccH-HHHhh--hhcC-------------CccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 385 YSSPKE----DPELRA-EEKRH--ILGG-------------SISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 385 ~~~~~~----~~~~~~-~~~~~--~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
++.++. .+..+. +..++ ..++ ....+..+...++.++++|.++...+..++..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 333321 000000 00000 0000 000001112366778888887776665554444333333
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
..++.+.. .++.+.. ....+.++..+++.++.+++.||+|+|+.+... .........++........+.
T Consensus 344 ~~~~~~~~-~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~-------~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 344 YGLVLDLG-NLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAAS-------LLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HHHhcccc-ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-------HHHHHHHHHHHHHcCCCchHH
Confidence 33333333 3455533 333455677788899999999999988643321 111111111111111221122
Q ss_pred HHHHHHHHhh-hhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQG-SDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 525 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
.+...+++.+ .............+..|++.|+++.|+.+++..+|++++|.+.+ + +..++...+.+.+++.+++.++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHH
Confidence 2222222222 22223333333455567789999999999999999999999999 4 4455666777777776666555
Q ss_pred HHHH
Q 007159 604 WNLF 607 (615)
Q Consensus 604 ~~~~ 607 (615)
.+++
T Consensus 491 ~~~l 494 (505)
T TIGR00898 491 TLFL 494 (505)
T ss_pred HHcC
Confidence 5444
No 75
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1e-25 Score=270.63 Aligned_cols=348 Identities=13% Similarity=0.107 Sum_probs=245.0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHH---HHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHH
Q 007159 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFG---VIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAM 318 (615)
Q Consensus 242 ~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~---~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~ 318 (615)
..+++..+++.++++++++++|+++||+|||+++... .++..+..++....+ +++.++++|+++|++.+...|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN--SVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhhchHH
Confidence 4578899999999999999999999999999976432 222222222222334 78899999999999999999999
Q ss_pred HHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHH
Q 007159 319 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 398 (615)
Q Consensus 319 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (615)
.+++.++++++++++++|+.+++..+|.++||+++|++....+|++.|+..+++.++.+++.++. ++.+..++..+...
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI-PKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC-CCCCCCCCCCeecc
Confidence 99999999999999999999999999999999999999999999999954444444433333333 22221111110000
Q ss_pred HhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Q 007159 399 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFAN 478 (615)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~ 478 (615)
.. .......++.+.+++.+|.+.+..++..+....+.+++|.|+++.+|.++...|++.+...++.+++.+
T Consensus 209 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 209 NI---------IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred ch---------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 00 000012467788899999988888888888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHH-------------HH-HhccccchHHHHHHHHHHhhhhhhhhhhhh
Q 007159 479 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFF-------------LT-QLSHVRTPAMAVLCMACSQGSDAFSQSGLY 544 (615)
Q Consensus 479 l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-------------l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (615)
+.|++.++...++....+. +...+..+...+. +. .....+.+.+.+..++++.+......+...
T Consensus 280 ~~g~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 357 (1140)
T PRK06814 280 LASKLSEGRITLLYVPIGA--LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFA 357 (1140)
T ss_pred HHHHHhCCceeeeeehHHH--HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999998877665443221 1111111111110 00 000123333344444455444444445455
Q ss_pred hhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec-cCChhHHHHHHHHHHHHHHHH
Q 007159 545 SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 545 ~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~-~~g~~~~f~~~~~~~l~~~l~ 603 (615)
...+..+++.+|+++|+.+++..++..+++++.|.+.+ ..++...+++.+++.++..++
T Consensus 358 ~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 358 ALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAIL 417 (1140)
T ss_pred HHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 56677888999999999999999999999999999985 467777776666554444433
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=4.1e-25 Score=234.91 Aligned_cols=375 Identities=13% Similarity=0.039 Sum_probs=251.7
Q ss_pred HHHHHHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH
Q 007159 211 LCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (615)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~ 289 (615)
.+...+++.+.....+.+.+|.+ .+++|++..++|++.+++.++..++++++|+++||+|||+.++.+.+..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33444555566666777777765 55789999999999999999999999999999999999999988776665544322
Q ss_pred ---Hhhh---ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 290 ---PVAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 290 ---~~~~---~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
.+.+ ...+..+++.+++.|++.+...+....+..+.. ++++..++......++|.++||++++.+.+ .+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 1111 001334566788889988888888888877753 334567788888889999999999998865 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 007159 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 443 (615)
+.|++.+++.++..++.+...+++++++ +. ++.. + .+++..+..++++++++|.++.+.+..++....+...
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~---~--~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 234 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKAPSSA-TV--ANAL---G--ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVF 234 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhh-hh--hccc---c--cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 9999888777766555444333322211 00 0000 0 0011112235677889998887777666666556666
Q ss_pred HHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 444 LTWMPTYYNQVL---KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 444 ~~~~p~~~~~~~---g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
..+.|.|+.+.+ +.+....|...++..+...++.+..+++.||+++|+....+ ..+.++.........
T Consensus 235 ~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~---------~~l~~l~~~~~~~~~ 305 (396)
T TIGR00882 235 DQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIA---------GTIMSVRIIGSSFAT 305 (396)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH---------HHHHHHHHHHHHhcC
Confidence 667888887765 45666788888888889999999999999999999754322 111111111111223
Q ss_pred chHHHHHHHHHHhhhhhhhhh-hhhhhhhccCcchhhHHHHH-HHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHH
Q 007159 521 TPAMAVLCMACSQGSDAFSQS-GLYSNHQDIGPRYAGVLLGL-SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYI 598 (615)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~gl-~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l 598 (615)
.++.++...++.+........ ......+..+++.+++..+. .+....+|..+++.+.|++.|..||..+|.+.+++.+
T Consensus 306 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~ 385 (396)
T TIGR00882 306 TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVL 385 (396)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHH
Confidence 333333222222222222221 22223344566777776666 6788999999999999999999999999999998887
Q ss_pred HHHHHHH
Q 007159 599 IGTLVWN 605 (615)
Q Consensus 599 ~~~l~~~ 605 (615)
+..++..
T Consensus 386 i~~~~~~ 392 (396)
T TIGR00882 386 LFTLISV 392 (396)
T ss_pred HHHHHHH
Confidence 7766543
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=1.5e-24 Score=231.78 Aligned_cols=368 Identities=11% Similarity=0.069 Sum_probs=241.7
Q ss_pred HHHHHhhhhhHHHH-hHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCC-chHHHHHHHHHHHHHHHHHhh
Q 007159 215 AFLLCNMDRVNMSI-AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Gr-k~~l~~~~~l~~i~~~l~~~~ 292 (615)
.+++.+.....+.+ ..+.+.+++|++..++|++.+++.++.+++++++|+++||+|+ |+++.++.++..++..+..+.
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~ 89 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV 89 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445555544 4455677899999999999999999999999999999999965 778888888887887777777
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhc--------ccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW--------IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
+ +++.+++.|++.|++.+...+...++...+ .....|.+.+| .+|.++||.+++.+....+|.
T Consensus 90 ~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~- 160 (418)
T TIGR00889 90 T--TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI- 160 (418)
T ss_pred c--CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-
Confidence 6 778888999999998887777776654322 22223444444 478899999998774333354
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
.|++.+++.++..++.+ ..++.++.+++.+....+ ......+.++|+|.++.+.+..++.........
T Consensus 161 ~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 228 (418)
T TIGR00889 161 QLYITAGSSALLGVFAL-TLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITN 228 (418)
T ss_pred HHHHHHHHHHHHHHHHh-cCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHH
Confidence 35555555544444333 333332211111000000 000124457788888887777777766666666
Q ss_pred HHHHHHHHHHhCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 445 TWMPTYYNQVLKFN--------LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 445 ~~~p~~~~~~~g~s--------~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
.++|.|+++ .|.+ ....+...++..+..+++.++.|++.||+++|+.+..+. .+......++..
T Consensus 229 ~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~-------~~~~v~~~l~~~ 300 (418)
T TIGR00889 229 IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL-------VAWALRFGFFAY 300 (418)
T ss_pred HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH-------HHHHHHHHHHHH
Confidence 788888876 4544 356688889999999999999999999999986543221 111111111221
Q ss_pred cccc--chHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHH-HHHHHHHHHHHHHhhheecc------CCh
Q 007159 517 SHVR--TPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN-TAGVLAGVFGTAATGYILQR------GSW 586 (615)
Q Consensus 517 ~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~-~~~~lg~~igp~l~G~l~~~------~g~ 586 (615)
.... ..+.. +..++.+.+.....+.......+..+++.+|++.|+.+ ....+|..+||+++|++.|. .||
T Consensus 301 ~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~ 380 (418)
T TIGR00889 301 GDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDW 380 (418)
T ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCch
Confidence 1111 12222 22333333333333333444566778899999999997 56789999999999999997 468
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC
Q 007159 587 DDVFKVAVVLYIIGTLVWNLFATGE 611 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~~~~~ 611 (615)
+.+|.+.+++.+++.+++.++.+++
T Consensus 381 ~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 381 QTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999988888777777666655543
No 78
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=3.4e-24 Score=227.33 Aligned_cols=375 Identities=14% Similarity=0.073 Sum_probs=259.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHH--HHHHHHHHHHHHHhhHH-hhhhcCCchHHHHHHHHH-HH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLI--QSSFFWGYLLTQIVGGI-WADKFGGKPVLGFGVIWW-SV 284 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i--~s~~~l~~~l~~~~~G~-l~Dr~Grk~~l~~~~~l~-~i 284 (615)
+..++..++..+.......+.+|.+.++.|.|..++|++ .++..+...+.+|+++. ..||+|||+.+++...+. .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455666778888888889999999999999999999997 46778888888888855 789999998875555332 22
Q ss_pred HHHHHH-hhhc-cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 285 ATVLTP-VAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 285 ~~~l~~-~~~~-~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
...... +... ....+++...++.++..+...+...++..+..++++++...+....+..+|.++|+...+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 1111 11333455556667777888888888988988888888888888888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
|..|++.+++.++..+..+...++++++++. ... ...++++++++|.++...+..++.......
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 226 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA-PLA---------------RRASLFRFFRRPLAWSLLALALLSAMTAVS 226 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-chh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 9999998887766555544443332211110 000 011456678888888888887888777888
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT 521 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i-~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 521 (615)
...+.+.|+++ .|+++++.|.+....+. ..+++.++.|++.||+++++...... ....... ..............
T Consensus 227 ~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~ 302 (390)
T TIGR02718 227 GFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV--GLAGSLA-LLWFAQAAFWLAPG 302 (390)
T ss_pred HHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH--HHHHHHH-HHHHHHHHcccCCc
Confidence 88899999988 69999999998887764 56677899999999999886543221 0000000 11110000011122
Q ss_pred hHHHHHHHHHHhhhhhhhhhh-hhhhhhccCc-chhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 522 PAMAVLCMACSQGSDAFSQSG-LYSNHQDIGP-RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
.........+.....+...+. .....+..++ +.+|+.+++.+.+.++|..+||.++|++.|..|+...|.+.+++.++
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 222222222222222233222 2233444555 88999999999999999999999999999999999999988887777
Q ss_pred HHHH
Q 007159 600 GTLV 603 (615)
Q Consensus 600 ~~l~ 603 (615)
+.++
T Consensus 383 a~~~ 386 (390)
T TIGR02718 383 AILL 386 (390)
T ss_pred HHHH
Confidence 6543
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.3e-24 Score=217.67 Aligned_cols=375 Identities=15% Similarity=0.167 Sum_probs=281.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
.++.+...+++.++......+.+|.+.+.++++..+++++...++.+|.+.+++.|.+.+|+|+|+.+++|+.+++++..
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 44555555666777778888999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHH-hhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC-------
Q 007159 288 LTP-VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK------- 359 (615)
Q Consensus 288 l~~-~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~------- 359 (615)
+.. .+...++..++++.++.|.|.+...++.+.++..+.++++....+.+.+...++|.++||++++.++..
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 764 333346788999999999999999999999999999998899999999999999999999999988762
Q ss_pred ------------CCchHHHHHHHHHHHHHHHHHHhhh-cCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhH
Q 007159 360 ------------FGWPSVFYSFGSLGSIWFALWLKKA-YSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPV 426 (615)
Q Consensus 360 ------------~gw~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 426 (615)
-.|++.|.+.+....++.+.....+ |+.+..+++..+.. .....+++++|.+
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~---------------~~~~~~l~~~~~~ 238 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG---------------SAGLSSLFQNKHL 238 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc---------------cchHHHHHhChHH
Confidence 2377788777666555554443333 22111111111100 0024567899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHH
Q 007159 427 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 506 (615)
Q Consensus 427 ~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~ 506 (615)
+...+..|++.........|++.|+.+..|++..+.+.+.+.++.+.++|++++.++..|+...|.+.. .++
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf--------~a~ 310 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF--------YAL 310 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH--------HHH
Confidence 999999999999999999999999999889999999999999999999999999999999988764321 111
Q ss_pred HHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 507 LGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 507 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
....++ ......+....+....+++.+...++|.......+..+ ++...+ |..-...-+|+.+-|++.|++.|..|.
T Consensus 311 ~~ill~-~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 311 IAILLL-LAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHHHH-HHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeeeheecchHHHHHHHHHHHhhhh
Confidence 111111 11112233444445555555555555555555555555 443333 333455678999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 007159 587 DDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
...+.....+|.+-.+.+.+..
T Consensus 388 ~~~~~~~pllc~lyV~~~~~~~ 409 (422)
T COG0738 388 QLTFLIVPLLCYLYVLFFALIG 409 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 8888866666666654444433
No 80
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=2.6e-24 Score=233.19 Aligned_cols=399 Identities=13% Similarity=0.069 Sum_probs=264.0
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHh-h--cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSK-E--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~-~--~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i~ 285 (615)
..++...++..+..+.+.+.+|.+.+ + +|++..+.|++.+.+.+++.++++++|+++|| +|||+++.++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 33344455555666666666776654 4 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccc---hhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE---RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
.++.++++ +++.+++.+++.|++.+...+...+++++++|+++ |+.+++++..+.++|.++||++++++.+++||
T Consensus 93 ~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred HHHHHhcc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 99888876 66778889999999999999999999999998654 88899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcC---CCCCCccccHHHHhhhh-------------------cCCccc-----------
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYS---SPKEDPELRAEEKRHIL-------------------GGSISK----------- 409 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-------------------~~~~~~----------- 409 (615)
++.|++.++..++..+.+....+. .++++++.++++.+... ......
T Consensus 171 ~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 171 HVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 999998775544433333322211 11111111111000000 000000
Q ss_pred -------cccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH----HHHHHHHHHHHHHHHHH
Q 007159 410 -------EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE----SGLFCVLPWLTMAVFAN 478 (615)
Q Consensus 410 -------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~----~g~~~~~~~i~~~ig~~ 478 (615)
...+.....+-.+...+..+++..++....+....+.++.+.++..+.+... .+++.++..+..++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 0000000001111223344444455555666666677888877754443222 66788888888888777
Q ss_pred HHHHHHHHhhhccc-----cHHHHHHHHHHHHHHHHHHHHHHh---ccccchHHHHHHHHHHhhhhhhhhhhhhhhhhcc
Q 007159 479 MGGWIADTLVSKGL-----SITAVRKIMQSIGFLGPAFFLTQL---SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDI 550 (615)
Q Consensus 479 l~g~l~dr~g~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (615)
+..++..++.+|+. ........+..++++..++..... ...+.++++...++.+.+.....+.......+..
T Consensus 331 ~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a 410 (475)
T TIGR00924 331 VLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIA 410 (475)
T ss_pred HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 76665555555311 111111111222222211110000 0223444555566666666666666666667777
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 551 GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 551 ~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
|++.||+.+|+......+|..+++.+.+...+..++...|...++++++..++.++..+.
T Consensus 411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999988787888888888888877777766665544
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.94 E-value=1.8e-24 Score=260.67 Aligned_cols=361 Identities=16% Similarity=0.137 Sum_probs=245.5
Q ss_pred hHHHHhHHHHHhhcCCCc--hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhh-ccChHHH
Q 007159 224 VNMSIAILPMSKEFNWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-RIGLPFL 300 (615)
Q Consensus 224 ~~~~~~~~~i~~~~g~s~--~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~-~~~~~~l 300 (615)
.......+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.++..++..++. ..+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 333444555666666544 4479999999999999999999999999999999998877666655443321 1268889
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC--------C-CchHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--------F-GWPSVFYSFGS 371 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~--------~-gw~~~f~~~~~ 371 (615)
+++|++.|++.+...++..+++.+++++++|++++++...+..+|.++|+++++++.+. + +|.+.+.+..+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998875 2 34444444433
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
...++.+++....++.+............ .........++.+++++.++...+..++..........++|.|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA 259 (1146)
T ss_pred HHHHHHHHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 33333333323233322221110000000 00000112456677888888877777777777777888999999
Q ss_pred HHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHH
Q 007159 452 NQVLKFNLT-ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCM 529 (615)
Q Consensus 452 ~~~~g~s~~-~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 529 (615)
.+.+|++.. ..+++++...++.+++.++.+++.||+++++.+..+. ++.++.++.+......+ .++..+
T Consensus 260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1146)
T PRK08633 260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA---------LGLALSLFLLPTAPSLASVLVLFF 330 (1146)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH---------HHHHHHHHHHHHhhhHHHHHHHHH
Confidence 999999998 9999999999999999999999999998876543221 11111111111112223 333333
Q ss_pred HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHH
Q 007159 530 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIG 600 (615)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~ 600 (615)
+++.+......+.........+++.+|+++|+.+++..+|.++++.+++.+... .++...+++.+.+.++.
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 344333333334344455667789999999999999999998888887766542 34555566555544443
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.9e-25 Score=248.91 Aligned_cols=281 Identities=17% Similarity=0.221 Sum_probs=222.4
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~ 289 (615)
+.+++.++...+........++.+.++|+++..+.|++.+.+.++++++.++.+++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44444666667777888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred Hhhh-------------------------------------------------ccChHHHHHHHHHHHhhhcchhhHHHH
Q 007159 290 PVAA-------------------------------------------------RIGLPFLLIMRAFMGIGEGVAMPAMNN 320 (615)
Q Consensus 290 ~~~~-------------------------------------------------~~~~~~ll~~r~l~G~~~~~~~~~~~~ 320 (615)
++.+ +..+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7763 112556789999999999999999999
Q ss_pred HhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC----------------------CchHHHHHHHHHHHHHHH
Q 007159 321 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF----------------------GWPSVFYSFGSLGSIWFA 378 (615)
Q Consensus 321 ~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~ 378 (615)
++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 166678877777766665
Q ss_pred HHHhhhcCCCCCCcccc--HHHHhhhhc-CCcc-c-----cccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 379 LWLKKAYSSPKEDPELR--AEEKRHILG-GSIS-K-----EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 379 ~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~-~-----~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
+++...++.|++..+.+ ..+...... .... . .......++.++++|.++...+..++.....+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544444332211110 000000000 0000 0 0011235677899999999999999999999999999999
Q ss_pred HHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhc
Q 007159 450 YYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSK 490 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i-~~~ig~~l~g~l~dr~g~~ 490 (615)
|+++.+|+++.+++++..+..+ +.+++.+++|++.||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 5688999999999999854
No 83
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=9.3e-24 Score=208.36 Aligned_cols=373 Identities=13% Similarity=0.181 Sum_probs=287.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
|..+..+.+..+.---..+..+|.++.+.+++|+|.+.+|++.++..+...+.+++..++..|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33334433433433455566788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-CchH
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPS 364 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~-gw~~ 364 (615)
.++-... +.+.++..-.+.|.+.+......+.++-+.| +++-+..+|+|.....+|.++++.+...+.++. |||.
T Consensus 91 ~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 9887655 3566888999999999999999999999999 578899999999999999999999999888877 7999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 444 (615)
...+.+...++.+++++....+......... ..+-..++++|.-|.+.+.+.+....+|...
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~~~~~~~~------------------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~ 228 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQAASIATK------------------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVI 228 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccc------------------cccccccccCchhHHHHHHHHhhHHHHHHHH
Confidence 9999998888888887765322110000000 0112337889999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHH
Q 007159 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (615)
Q Consensus 445 ~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (615)
.|+|.++.| .|+|..++|.+.++..+..+...++.+.+.+|...++..... ...+...+++-+.+.....++.
T Consensus 229 ~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~------~~~~~l~G~~G~~~~P~~~~~l 301 (395)
T COG2807 229 GWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVL------ALLLMLVGLVGLLLAPGQLPIL 301 (395)
T ss_pred HHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH------HHHHHHHHHHHHHHhhhhHHHH
Confidence 999999999 599999999999999999999999999999997776644321 1111111121122222233333
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhh-ccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHHHH
Q 007159 525 AVLCMACSQGSDAFSQSGLYSNHQ-DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~~l 602 (615)
. .++++.+.++.++.....+.. ...++..+.-.|+.+.++++-..+||.+.|++.|. ++|...+....+..++..+
T Consensus 302 w--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 302 W--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred H--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 3 355555555555555544443 44568889999999999999999999999999997 6788887777766666555
Q ss_pred HHHHHhc
Q 007159 603 VWNLFAT 609 (615)
Q Consensus 603 ~~~~~~~ 609 (615)
.-+...|
T Consensus 380 ~Gl~a~r 386 (395)
T COG2807 380 FGLRAGR 386 (395)
T ss_pred HHhhcch
Confidence 5444443
No 84
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=9.3e-26 Score=223.96 Aligned_cols=353 Identities=18% Similarity=0.119 Sum_probs=270.9
Q ss_pred HHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhh
Q 007159 231 LPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIG 310 (615)
Q Consensus 231 ~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~ 310 (615)
|.=..+++.+.+++|++++.+.+..++..++.|.+.||+|+|..+++|++++..+++++++.. +++++++.|.++|+|
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvg 172 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVG 172 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhh
Confidence 333455677889999999999999999999999999999999999999999999999999998 788999999999999
Q ss_pred hcchhhHHHHHhhhccccc-chhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 007159 311 EGVAMPAMNNMLSKWIPVS-ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK 389 (615)
Q Consensus 311 ~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 389 (615)
.+...+...++++|.+|++ ||++++|+...+.++|.++||++||.+++..|.+..|++++++.++-..+.+...++.+.
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 9999999999999999865 579999999999999999999999999999999999999999988877776665544332
Q ss_pred CCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Q 007159 390 EDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLP 469 (615)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~ 469 (615)
++++.. +..++.+++++|.++.........+.........++.+..+...-+..+.|+.+...
T Consensus 253 ~~~~~~-----------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~ 315 (464)
T KOG3764|consen 253 DPDSTE-----------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA 315 (464)
T ss_pred Cccccc-----------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence 221111 112677789999998888877777777777788899999988886666999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHH--H-HHHhhhhhhhhhhhhh
Q 007159 470 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLC--M-ACSQGSDAFSQSGLYS 545 (615)
Q Consensus 470 ~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~~~ 545 (615)
.+...++..+.|.+.||++..+.+ ..+.+++..+++.......+.+. +++-. . +.+........+....
T Consensus 316 ~~~y~ig~~lfg~la~k~~~~~wl-------~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~ 388 (464)
T KOG3764|consen 316 SLSYAIGTNLFGKLADKYPHLRWL-------LSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGY 388 (464)
T ss_pred ccchhccCchHHHHHHhcCchhHH-------HHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999999954322 22233333333222222222222 11111 1 1111112222222222
Q ss_pred hhhccCc---chhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 546 NHQDIGP---RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 546 ~~~~~~~---~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+.+.... +..|.+.++......+|..+||.++|.+.+..|+.+.....++..++-.-+..+++.
T Consensus 389 lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 389 LVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred hcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 367999999999999999999999999999999999988888887776655555443
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=1.3e-23 Score=219.94 Aligned_cols=324 Identities=13% Similarity=0.061 Sum_probs=226.4
Q ss_pred hHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-----CCchH-HHHHHHHHHHHHHHHHhhhc-cC
Q 007159 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKPV-LGFGVIWWSVATVLTPVAAR-IG 296 (615)
Q Consensus 224 ~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-----Grk~~-l~~~~~l~~i~~~l~~~~~~-~~ 296 (615)
...++..|.+.+++|+|.+++|+...+ .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++... .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456678899999999999999999755 555555 89999999998 88886 56677777777666666532 24
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC--------chHHHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG--------WPSVFYS 368 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g--------w~~~f~~ 368 (615)
.+.+....++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 55677777888898898999999999999999999999999999999999999999999988888 9999998
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhh---HHHHHHHHHHHHHHHHHHHH
Q 007159 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP---VWALIISHFCHNWGTFILLT 445 (615)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~l~~~~~~~~~~~~~~ 445 (615)
.+++.++..++.+...+++.++++.. +++... ....++.+++++. ++.+.+..++.....+....
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASVP-KPLTQA-----------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccc-hhHHHH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665544443333322211111 111000 0114566677665 66666666777777888889
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc-----
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPW-LTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV----- 519 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~-i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 519 (615)
++|.|+++ +|++..+.+.+....+ ++.+++.+++|++.||+++|+...... ....+ ............
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~--~~~~~---~~~~~~~~~~~~~~~~~ 304 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFG--IVQAL---TNAGFVWLASNGHHDGI 304 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH--HHHHH---HHHHHHHHHhcCccccc
Confidence 99999988 8999999998887666 567899999999999999886533221 11111 111111111111
Q ss_pred --cchHHHHHHHHH-HhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHH
Q 007159 520 --RTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGV 567 (615)
Q Consensus 520 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~ 567 (615)
+..+....+.++ +.+.............+..|++++|+.+|+.+...+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 305 TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 222333333333 333344444445556677888999999999887654
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=1e-23 Score=227.08 Aligned_cols=339 Identities=15% Similarity=0.133 Sum_probs=229.7
Q ss_pred hHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh----cCC-chHHHHHHHHHHHHHHHHHhhhccC----hHH
Q 007159 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTPVAARIG----LPF 299 (615)
Q Consensus 229 ~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr----~Gr-k~~l~~~~~l~~i~~~l~~~~~~~~----~~~ 299 (615)
..+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|| |+.++.+.+..+++.+++.+.++.+ ...
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4555778899999999999999999999999999999998 677 4467778888888877776665321 345
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcc-cccchhhHHHHHHHHHHHHHHHHhhhHhhhh-------cCCCchHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILI-------QKFGWPSVFYSFGS 371 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~-------~~~gw~~~f~~~~~ 371 (615)
+++.+++.+++.+...++..++..+.. +++||++..++...+..+|..+++.+.+.+. +..+|++.+++.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 677788889988888888888888887 4688999999988888888877766655544 24689999998888
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
+.++..++.....++++++.+..++ + +......++.++++|.++.+.+..++...+......+.+.|.
T Consensus 182 l~~~~~~~~~~~~~e~~~~~~~~~~-~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (437)
T TIGR00792 182 IGVVSLIICFFGTKERYSEIPKNIE-K-----------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYF 249 (437)
T ss_pred HHHHHHHHHHcCCEecCCCCCcccc-c-----------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeE
Confidence 8777666555444443321111000 0 000112456778899988888877777777666666666666
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMAC 531 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 531 (615)
+..++ +....+.+..+..++.+++.++.+++.||+++|+....+. .+.............+.....+...+.
T Consensus 250 ~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (437)
T TIGR00792 250 TYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGI-------LLMVLGYLIFFFAGSNLPLILVLIILA 321 (437)
T ss_pred eeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH-------HHHHHHHHHHHHcchhHHHHHHHHHHH
Confidence 65555 4566677777788899999999999999999886543221 111111111111111222222222222
Q ss_pred Hhhhhhhhhhhhhhhhhcc-------CcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChh
Q 007159 532 SQGSDAFSQSGLYSNHQDI-------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 587 (615)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~ 587 (615)
+.+.............+.. +++.+|.+.|+.+.+..+|..+++.+.|++.+..||.
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 322 GFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2322222222222222222 3567899999999999999999999999999876663
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=2.2e-22 Score=218.25 Aligned_cols=401 Identities=15% Similarity=0.143 Sum_probs=250.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhH-HHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAI-LPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWS 283 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~ 283 (615)
++.+..++...+...+..+.+...+ ..+.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 3444444444455555555555444 44577899999999999999998899999999999999 999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhccccc--chhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g 361 (615)
++.++++++.+. ...+++.|+++|+|.|...+...+++.|.+|++ +|+++++++..+.++|.++||.+++++.+++|
T Consensus 93 ~g~~~~~~~~~~-~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 93 IGYFMTGMSLLK-PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHhccc-hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999998887621 334557899999999999999999999999876 45778999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCCCC--CccccHHHHhhh----------------hcCCccccc------------
Q 007159 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKE--DPELRAEEKRHI----------------LGGSISKEA------------ 411 (615)
Q Consensus 362 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------------~~~~~~~~~------------ 411 (615)
||+.|++.++...+..+.+....+..++. +++..+.+.... .........
T Consensus 172 w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (489)
T PRK10207 172 YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTI 251 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 99999986543332222222211111010 010000000000 000000000
Q ss_pred ---cccccHHHHhhhhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCChh----HHHHHHHHHHHHHHHHHHHHHH
Q 007159 412 ---VSVIPWKLILSKAPVWALIIS--HFCHNWGTFILLTWMPTYYNQVLKFNLT----ESGLFCVLPWLTMAVFANMGGW 482 (615)
Q Consensus 412 ---~~~~~~~~l~~~~~~~~~~l~--~~~~~~~~~~~~~~~p~~~~~~~g~s~~----~~g~~~~~~~i~~~ig~~l~g~ 482 (615)
.......+..|+|.+....+. ..+....+....+.++.|.++..+.+.. ..+.+..+..+..++..++.++
T Consensus 252 ~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~ 331 (489)
T PRK10207 252 IFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAG 331 (489)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHH
Confidence 000000123444444333222 2333344444556778887753332110 1233444455666677888899
Q ss_pred HHHHhhhcccc-----HHHHHHHHHHHHHHHHHHHHHHhc----cccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc
Q 007159 483 IADTLVSKGLS-----ITAVRKIMQSIGFLGPAFFLTQLS----HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR 553 (615)
Q Consensus 483 l~dr~g~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (615)
+.||+++|+.- .......+..++++..+....... ..+.++.+...++.+.+.....++.........|++
T Consensus 332 l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~ 411 (489)
T PRK10207 332 IYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH 411 (489)
T ss_pred HHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH
Confidence 99999988631 111111222222221111111111 112334444555666666666666677777888999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhheec----------cCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 554 YAGVLLGLSNTAGVLAGVFGTAATGYILQ----------RGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 554 ~~g~~~gl~~~~~~lg~~igp~l~G~l~~----------~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
.+|.++|+.++...+|+.+|..+.+.... ...+...|...++..+++.+++++.
T Consensus 412 ~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 412 LMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988876531 1135677777776666655555443
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=1.6e-22 Score=209.62 Aligned_cols=371 Identities=12% Similarity=0.093 Sum_probs=254.8
Q ss_pred hhhhHHHHhHHHHHhhcCCCchh-hHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHH
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTT-VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF 299 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~-~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ 299 (615)
-.+...+.+.|.+.+++|++..+ .|.+.+++..+|++++++.|.++||+|.|+++.++.+.+++..+++++++ ++..
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~ 117 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWH 117 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 56777888999999999999999 99999999999999999999999999999999999999999999999998 7889
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHH--HHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG--SLGSIWF 377 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~--~~~~~~~ 377 (615)
+.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.+++++++++ ...+|||+-+.+.- .....+.
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999 45689997654321 1111222
Q ss_pred HHHHhhhcCCCCC-----Cc--c-ccHHH-Hhh-hhcC-Cccccc---------cccccHHHHhhhhhHHHHHHHHHHHH
Q 007159 378 ALWLKKAYSSPKE-----DP--E-LRAEE-KRH-ILGG-SISKEA---------VSVIPWKLILSKAPVWALIISHFCHN 437 (615)
Q Consensus 378 ~~~~~~~~~~~~~-----~~--~-~~~~~-~~~-~~~~-~~~~~~---------~~~~~~~~l~~~~~~~~~~l~~~~~~ 437 (615)
+++.+..|.+++. ++ + ....+ ... ..+. ...+.. .-...++...+++.+....+-..+..
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 2222222222110 00 0 00000 000 0000 000000 01223455567788777777777778
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhc
Q 007159 438 WGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 517 (615)
Q Consensus 438 ~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 517 (615)
.+++.+.+|......+.-+-.....|.+-++..+.+.+..+..|++-.+..+. ..+.+.+..++.+.+++.+.
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhh
Confidence 88888888888887765332223567777888888888899999885544222 12334444445555566666
Q ss_pred cccchHHHHHHHHHHhhhhh-hhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHh----hheecc----CChhH
Q 007159 518 HVRTPAMAVLCMACSQGSDA-FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT----GYILQR----GSWDD 588 (615)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~----G~l~~~----~g~~~ 588 (615)
..++.++..++.++...... ..+.....++.....+..|..+|+++++..+-..+-..+. |.=.+. .=|..
T Consensus 349 ~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~ 428 (511)
T TIGR00806 349 QSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSV 428 (511)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhh
Confidence 77777776666555554444 4444445567777788889999998887766665555433 221111 12344
Q ss_pred HHHHHHHHHHHHHH
Q 007159 589 VFKVAVVLYIIGTL 602 (615)
Q Consensus 589 ~f~~~~~~~l~~~l 602 (615)
-|.+.++++++..+
T Consensus 429 yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 429 YFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555555544
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=1.4e-22 Score=200.34 Aligned_cols=358 Identities=18% Similarity=0.110 Sum_probs=221.9
Q ss_pred HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhc
Q 007159 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 312 (615)
Q Consensus 233 i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~ 312 (615)
..+..+.+..-.|++.+.|.+..++.++.+|.++||+|||++++++++..++..++.+.+. ++..+++.|++.|+..+
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKG 136 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccC
Confidence 3344445667789999999999999999999999999999999999999999999999988 78667777999999988
Q ss_pred chhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc---CCCch-HHH--HHHHHHHHH-HHHHHHhhhc
Q 007159 313 VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ---KFGWP-SVF--YSFGSLGSI-WFALWLKKAY 385 (615)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~---~~gw~-~~f--~~~~~~~~~-~~~~~~~~~~ 385 (615)
-. ....++++|.+++|+|+++++.+....++|.++||.+||++.+ ..|-- ..+ ++..++... ...+.++..+
T Consensus 137 nl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 137 NL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred ch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 65 7888999999999999999999999999999999999999987 33311 111 111112221 1222222222
Q ss_pred CCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 007159 386 SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVW-------ALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (615)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s 458 (615)
..+.++...+..+..+..+...+-...+...--..+++++.. .+.+..+.+...+..+..+.+.+..+.+|++
T Consensus 216 TL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~s 295 (451)
T KOG2615|consen 216 TLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYS 295 (451)
T ss_pred cccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCC
Confidence 222221110000000000000000000000011123333221 2223333333334444444444445678999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhh
Q 007159 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAF 538 (615)
Q Consensus 459 ~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (615)
+.+.|.+++..++.+.+.........+|.+.. .. ......+.++...+.+ ......+..+.....+-.+....
T Consensus 296 s~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~---~~--a~l~~~l~~~vP~~ll--ls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 296 SMQQGKVLSTTGLLMLVIQLALVPILPRYKGN---IK--AVLLFSLLLIVPAFLL--LSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred hhhheeeeehhhHHHHHHHHhccccccccccc---hh--hHHHHHHHHHHHHHHH--HhccccchhhhHHHHHHHHHHHH
Confidence 99999999888888888777666666665411 10 1122222233333333 33334444444444444444444
Q ss_pred hhhhhhhhhh-ccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHH
Q 007159 539 SQSGLYSNHQ-DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIG 600 (615)
Q Consensus 539 ~~~~~~~~~~-~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~ 600 (615)
..+....... ..++++||++.|+....+.++-++||++.|.+..+ .+-+..+...+.+.+..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 4555555444 45569999999999999999999999999999876 34444544444444444
No 90
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=7.5e-21 Score=200.16 Aligned_cols=370 Identities=13% Similarity=0.156 Sum_probs=255.5
Q ss_pred HHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcC-CchHHHHHHHHHHHHHHHHHhhh
Q 007159 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-GKPVLGFGVIWWSVATVLTPVAA 293 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~G-rk~~l~~~~~l~~i~~~l~~~~~ 293 (615)
.+++.+.....+.|..+.+.++.|+|..|+|++.++..+..++.++++|.++||++ +|+++.+..++.++..++....+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~ 89 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444555566778889999999999999999999999999999999999999986 57777777777766666666655
Q ss_pred ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhh-HhhhhcCCC---chHHHHHH
Q 007159 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV-SPILIQKFG---WPSVFYSF 369 (615)
Q Consensus 294 ~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l-~~~l~~~~g---w~~~f~~~ 369 (615)
+++.+++..++..+......|...++..+... +++...|-....+++|.+++... ++.+....+ ..+.+++.
T Consensus 90 --~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 90 --SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred --cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 67778888888888888888999999888874 55667788888888888887554 233333333 23455555
Q ss_pred HHHHHHHHHHHHhhhcCCCC-CCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 370 GSLGSIWFALWLKKAYSSPK-EDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
+++.++.....+.. ++.|. ++.+...++. ...+...++|+|+++.+.+..++.........++.+
T Consensus 166 ~~~~~ll~~~~l~l-p~~~~~~~~~~~~~~~-------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~ 231 (400)
T PF03825_consen 166 AILSLLLAGFALFL-PKTPPKRSAKESVKKL-------------LGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFS 231 (400)
T ss_pred HHHHHHHHHHHHhC-CCCccccccCCCcccc-------------cchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444433333332 33221 1111110000 011234578999999988888888888999999999
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcc--ccchHHHH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH--VRTPAMAV 526 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 526 (615)
.|+++.-|.+....+.++++..+..++.....+++.+|++.++.+. ++.+..++=...... .+.+....
T Consensus 232 ~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~---------~a~~~~~vR~~l~a~~~~~~~~~~~ 302 (400)
T PF03825_consen 232 IYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLL---------LALVAYAVRWLLYAYFSDPWPFIVA 302 (400)
T ss_pred HHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH---------HHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 9999854478888898888999999999999999999999884332 333333332222222 22222222
Q ss_pred HH----HHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHH-HHHHHHHHHHHhhheeccCChh------HHHHHHHH
Q 007159 527 LC----MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTA-GVLAGVFGTAATGYILQRGSWD------DVFKVAVV 595 (615)
Q Consensus 527 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~-~~lg~~igp~l~G~l~~~~g~~------~~f~~~~~ 595 (615)
.. ...+..+............+..|++.++++.++++.. .++|..+|..++|+++|..|.+ ..+.+.++
T Consensus 303 ~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~ 382 (400)
T PF03825_consen 303 LQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAV 382 (400)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence 22 2244455555555566667778889999999998876 5899999999999999987655 45556666
Q ss_pred HHHHHHHHHHHHhcCC
Q 007159 596 LYIIGTLVWNLFATGE 611 (615)
Q Consensus 596 ~~l~~~l~~~~~~~~~ 611 (615)
+.++..+++.++.|++
T Consensus 383 ~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 383 MALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhhccCC
Confidence 6666666655554443
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=6.1e-21 Score=205.91 Aligned_cols=354 Identities=14% Similarity=0.152 Sum_probs=239.2
Q ss_pred HHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccCh
Q 007159 218 LCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL 297 (615)
Q Consensus 218 ~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~ 297 (615)
..++.....+..++.+..++|-+ ....|+.+...++..+..++.|+++|.||||.+++.+.++..+|.++++-++ +.
T Consensus 55 ~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--~~ 131 (599)
T PF06609_consen 55 AAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--NM 131 (599)
T ss_pred HHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--cH
Confidence 33444444456678899999954 6788999999999999999999999999999999999999999999999998 77
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHH
Q 007159 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWF 377 (615)
Q Consensus 298 ~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 377 (615)
..++++..+.|+|.|... .....++|..|.|.|+...++......+...++|.++..+..+.+|||.|++.+++..+.+
T Consensus 132 ~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 889999999999977765 4556689999999998888777766666666788888777777899999999888766655
Q ss_pred HHHHhhhcCCCCCC---ccccHHH-Hhh-h-------------------hcCCc-cc-----------------------
Q 007159 378 ALWLKKAYSSPKED---PELRAEE-KRH-I-------------------LGGSI-SK----------------------- 409 (615)
Q Consensus 378 ~~~~~~~~~~~~~~---~~~~~~~-~~~-~-------------------~~~~~-~~----------------------- 409 (615)
++.++...+++.++ ++....+ .++ + +++.. .+
T Consensus 211 vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~w 290 (599)
T PF06609_consen 211 VLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVW 290 (599)
T ss_pred HHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHh
Confidence 44433333222111 1111111 111 0 01110 00
Q ss_pred ----cccc-cccHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHH
Q 007159 410 ----EAVS-VIPWKLILSK-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFANMG 480 (615)
Q Consensus 410 ----~~~~-~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~---~~g~~~~~~~i~~~ig~~l~ 480 (615)
.+++ ..|++ ++++ +.+...++..++....++....++|......++-++. ..++.....+++..++.++.
T Consensus 291 E~~~~~~~Pl~P~~-Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~ 369 (599)
T PF06609_consen 291 EWFGAPKDPLFPHR-LFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVIL 369 (599)
T ss_pred hhhccCCCCcCCHH-HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHH
Confidence 0111 23333 5565 4566656677777777788888889988887776653 56777778888888999999
Q ss_pred HHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHH
Q 007159 481 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 559 (615)
Q Consensus 481 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 559 (615)
|.+..++++.|..+.. ...+....+..+.....++. ......++.+.+.+....+......-..+++..|++.
T Consensus 370 g~l~~~ir~~Kw~li~------~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~ 443 (599)
T PF06609_consen 370 GLLFSKIRHIKWQLIF------GSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTAT 443 (599)
T ss_pred HHHHHHccchhHHHHH------HHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHH
Confidence 9999888765533211 11111111122222222222 2223333334444444444444444456779999999
Q ss_pred HHHHHHHHHHHHHHHHHhhheec
Q 007159 560 GLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 560 gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
|+..++..+|+.+|..+..-+..
T Consensus 444 gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 444 GLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999998877664
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=1.9e-20 Score=204.32 Aligned_cols=389 Identities=16% Similarity=0.131 Sum_probs=234.4
Q ss_pred HHHHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHHHHHHH
Q 007159 212 CFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVLT 289 (615)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i~~~l~ 289 (615)
+++..++..+..+.+...++. +.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~ 105 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV 105 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 334444444454445555444 568899999999999888877767777899999999 599999999999999998888
Q ss_pred HhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccc--hhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHH
Q 007159 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE--RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (615)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~ 367 (615)
+++.+ +.+.+++.++++|++.|...+...+++.+++|+++ +..++++++.+.++|.++||.+++++.+++|||+.|+
T Consensus 106 ~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 106 AWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred HHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 87642 35567788999999999999999999999997543 4567889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH---HhhhcCCCCCCc-c-ccHHHHhh--------------hhcCCcccc------------c--ccc
Q 007159 368 SFGSLGSIWFALW---LKKAYSSPKEDP-E-LRAEEKRH--------------ILGGSISKE------------A--VSV 414 (615)
Q Consensus 368 ~~~~~~~~~~~~~---~~~~~~~~~~~~-~-~~~~~~~~--------------~~~~~~~~~------------~--~~~ 414 (615)
+.++..++..+.+ ....++..++.+ + .+...... ......... . ...
T Consensus 185 i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (500)
T PRK09584 185 LSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEA 264 (500)
T ss_pred HHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 8765443332222 222222111110 0 00000000 000000000 0 000
Q ss_pred ccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCh------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 415 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ--VLKFNL------TESGLFCVLPWLTMAVFANMGGWIADT 486 (615)
Q Consensus 415 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~--~~g~s~------~~~g~~~~~~~i~~~ig~~l~g~l~dr 486 (615)
...+..- +++.+..++ .++....++......|.++.. ..+.+. ...+++.++..+..++..++.+++-+|
T Consensus 265 ~~~~~~~-~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~ 342 (500)
T PRK09584 265 FAMKGAA-RRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNK 342 (500)
T ss_pred hhcCHHH-HHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 0000111 122222222 223334445555555555442 111211 125566667777777777777777777
Q ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHhcc--------ccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHH
Q 007159 487 LVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH--------VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 558 (615)
Q Consensus 487 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 558 (615)
.++|.... .+..+.+.+...++....... .+.++.....++.+.+.....+.......+..|++.||++
T Consensus 343 l~~r~~~~---~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~ 419 (500)
T PRK09584 343 MGDRLPMP---HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFI 419 (500)
T ss_pred hCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence 76553221 112222222222222211111 1233555566666667666677776777778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhheec----------cCChhHHHHHHHHHHHHHHHHHHH
Q 007159 559 LGLSNTAGVLAGVFGTAATGYILQ----------RGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 559 ~gl~~~~~~lg~~igp~l~G~l~~----------~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
+|+......+|..++..+.+.... ..++...|...++++++..+++++
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 998887777777777666653221 124778888877776655544444
No 93
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.6e-20 Score=193.72 Aligned_cols=365 Identities=15% Similarity=0.132 Sum_probs=249.2
Q ss_pred hHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhc-cChHHHHHHHHHHHhhhcchhhHHHHHh
Q 007159 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNML 322 (615)
Q Consensus 244 ~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~-~~~~~ll~~r~l~G~~~~~~~~~~~~~i 322 (615)
.+.+.+++.+|.++|++..|+++||+|||..+.+..++..++.++..++.. .++.+++++|++.|+..+.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 466788999999999999999999999999999999888888877665542 2578899999999999999999999999
Q ss_pred hhcccccchhhHHHHHHHHHHHHHHHHhhhHh-hhh-cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCC-----Ccccc
Q 007159 323 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP-ILI-QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE-----DPELR 395 (615)
Q Consensus 323 ~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~-~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 395 (615)
.|..|.+-||..-.+...+..+|..+|..++. .+. +.-.|++.+....+.+++..+++.+. |+.|+- +++.+
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~-PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFL-PESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC-CCCcchHHHHcCCHHH
Confidence 99999999999999999999999999966653 333 34569998887777666655554443 333321 11100
Q ss_pred HHHHhhhh-cC---------------CccccccccccHHHHhhhhhHHHHHH----HHHHH-HHHHHHHHHHHHHHHHHH
Q 007159 396 AEEKRHIL-GG---------------SISKEAVSVIPWKLILSKAPVWALII----SHFCH-NWGTFILLTWMPTYYNQV 454 (615)
Q Consensus 396 ~~~~~~~~-~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~l----~~~~~-~~~~~~~~~~~p~~~~~~ 454 (615)
.++..+.. +. .......+..+++++++++....-.. ..+.. ..+......|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 00000000 00 00011123456778887765443322 22222 22334455555566665
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc-cch-HHHHHHH--H
Q 007159 455 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV-RTP-AMAVLCM--A 530 (615)
Q Consensus 455 ~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~~--~ 530 (615)
.|++..++.+.....++...+..+++.++.||+|||++++.+.... .+..+.+.+........ ... +..+++. .
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~--~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM--AVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999998776554222 22222222222222211 111 1122222 2
Q ss_pred HHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 531 CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
......+..+.......+.++++.|+.+.++......+..++-....-.+.+..|. ..|+...+.+++..+..+...++
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 22333445566667778888999999999999999999999999999888888776 67777777777777666666555
Q ss_pred Ccc
Q 007159 611 ERV 613 (615)
Q Consensus 611 ~k~ 613 (615)
.|.
T Consensus 457 Tkg 459 (485)
T KOG0569|consen 457 TKG 459 (485)
T ss_pred cCC
Confidence 553
No 94
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.90 E-value=6.6e-21 Score=196.98 Aligned_cols=381 Identities=13% Similarity=0.076 Sum_probs=245.6
Q ss_pred HHHHHHHhhhhhHHHHhHHHHHh-hcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH--HHHH-HH
Q 007159 213 FSAFLLCNMDRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW--SVAT-VL 288 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~-~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~--~i~~-~l 288 (615)
...++..++......+..+...+ +.|+|.+++|.+.++..+..++.+|+.|.++||+|.||-++....+. ..+. +.
T Consensus 13 s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 13 SLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 33444444556667777777655 58999999999999999999999999999999999766544333222 2222 22
Q ss_pred HHhhh--ccCh-HHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH
Q 007159 289 TPVAA--RIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (615)
Q Consensus 289 ~~~~~--~~~~-~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~ 365 (615)
..+.+ +.|+ ...+++.+..|+......|...+++.++. ++.+.-.|-....+++|.+++..++|.+.+ .+-...
T Consensus 93 ~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~ 169 (412)
T PF01306_consen 93 YVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNII 169 (412)
T ss_dssp HTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHH
Confidence 12221 1133 22333334445556666677777777764 556777888999999999999999999987 456777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007159 366 FYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 445 (615)
Q Consensus 366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 445 (615)
||+.....++..++.+..+++.+++.+..+... .++++.+.+...+++|+|++|.+.+........+..+..
T Consensus 170 fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdq 241 (412)
T PF01306_consen 170 FWIASAAAIILLLLLLLLKPDVPPQAEVADALG--------AKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQ 241 (412)
T ss_dssp HHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS--------S------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc--------cCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 887665555554444444433222211110000 001111123456788999999998887777777777777
Q ss_pred HHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 446 WMPTYYNQVL---KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 446 ~~p~~~~~~~---g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
.+|.|+...+ +.+....|.+.++..+..++...+.+++.+|+|.|+.++ ++..++.+=.......+.+
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll---------lag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL---------LAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---------HHHHHHHHHHHHHHT--SH
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH---------HHHHHHHHHHHHHhhhcch
Confidence 7888887532 234466889999999999999999999999999996433 2223333333444445555
Q ss_pred HHHHHHHHHHhhhhhhh-hhhhhhhhhccCcchhhHHHHHH-HHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHH
Q 007159 523 AMAVLCMACSQGSDAFS-QSGLYSNHQDIGPRYAGVLLGLS-NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 600 (615)
Q Consensus 523 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~gl~-~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~ 600 (615)
+.+...-.+-+....+. ....-.+.+..+++..++...+. +...++|..+.+.++|.+.|+.|++.+|++++.+.++.
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~ 392 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPF 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHH
Confidence 55555444444444443 34444566677788888999885 67789999999999999999999999999999888877
Q ss_pred HHHHHHHhcCCcc
Q 007159 601 TLVWNLFATGERV 613 (615)
Q Consensus 601 ~l~~~~~~~~~k~ 613 (615)
.++..+..+++++
T Consensus 393 ~li~~f~l~~~~~ 405 (412)
T PF01306_consen 393 TLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHS--SSS
T ss_pred HHHheeeecCCCc
Confidence 7776665555443
No 95
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=4e-20 Score=202.99 Aligned_cols=383 Identities=16% Similarity=0.108 Sum_probs=241.5
Q ss_pred HHHHHHHhhh--hhHHHHhHHHHHhhc-----CCCc--hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 213 FSAFLLCNMD--RVNMSIAILPMSKEF-----NWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 213 ~~~~~~~~~~--~~~~~~~~~~i~~~~-----g~s~--~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
.+..+..+.+ ....++....+.+.. ..+. .+.+++.+.+.++..++++++|+++|++|||+.++++.+++.
T Consensus 51 ~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~ 130 (513)
T KOG0254|consen 51 ALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFL 130 (513)
T ss_pred HHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3333444443 334445555555432 2222 345899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC-CCc
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGW 362 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-~gw 362 (615)
++.++++++. ++++++++|++.|+|.|........+++|..|++.||...+..+....+|..++..++....+. .+|
T Consensus 131 iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~W 208 (513)
T KOG0254|consen 131 IGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGW 208 (513)
T ss_pred HHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccH
Confidence 9999999999 8999999999999999999999999999999999999999999999999999995555444332 489
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc-ccHHHHh----hhhc--CCcc-cc--------------ccccccHHHH
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPE-LRAEEKR----HILG--GSIS-KE--------------AVSVIPWKLI 420 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~--~~~~-~~--------------~~~~~~~~~l 420 (615)
|..+.+..+.+++..+. +...++.|..--+ .+.++.+ ...+ .... .+ ......++++
T Consensus 209 r~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (513)
T KOG0254|consen 209 RIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGEL 287 (513)
T ss_pred HHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHh
Confidence 98888777776666666 4444444322111 0111100 0000 0000 00 0000012222
Q ss_pred hh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHH
Q 007159 421 LS----KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITA 496 (615)
Q Consensus 421 ~~----~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~ 496 (615)
+. ++.++.+.+..+....+......|.+.+++. .|.+... .....+.++...++..++.++.||+|||+.++.+
T Consensus 288 ~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s 365 (513)
T KOG0254|consen 288 FSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFG 365 (513)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHh
Confidence 22 2233444444555555566667788888776 4666443 4444556666777777889999999999877765
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-----ccchHHHH--HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHH
Q 007159 497 VRKIMQSIGFLGPAFFLTQLSH-----VRTPAMAV--LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLA 569 (615)
Q Consensus 497 ~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg 569 (615)
.. ...++.++.+........ ....++.+ .++.......+..+.......+..|.+.|+.+.++......+.
T Consensus 366 ~~--~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 366 AA--GMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HH--HHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 42 223333333322222111 11122222 2223333333344444445566677799999999999888887
Q ss_pred HHHHHHHhhheeccCChhHHHHHHHHHHHHHHH
Q 007159 570 GVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 570 ~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l 602 (615)
..+-....-.+.+..+....|...+.++.+..+
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 777666665665554434455555555544444
No 96
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.88 E-value=5.9e-19 Score=189.30 Aligned_cols=359 Identities=16% Similarity=0.099 Sum_probs=260.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHH-HHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHH
Q 007159 243 TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 321 (615)
Q Consensus 243 ~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~-~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~ 321 (615)
..++..++..+..++..|+.|.++|+-++||.++ +..++..++.+++.+.+..+++..+++-++.-++.+......+++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999988766554 444555556666666543356666666677777888888999999
Q ss_pred hhhcccccch--------------------------hhHHHHHHHHHHHHHHHHhhhHhhhhcC--------CCchHHHH
Q 007159 322 LSKWIPVSER--------------------------SRSLAFVYSGMYLGSVTGLAVSPILIQK--------FGWPSVFY 367 (615)
Q Consensus 322 i~~~~~~~~r--------------------------~~~~~~~~~~~~lG~~ig~~l~~~l~~~--------~gw~~~f~ 367 (615)
+.++.+++++ ++..+.-.+.+++|.++.-++.-.+... .+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8888888888889888877765544321 23477888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCC-CccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007159 368 SFGSLGSIWFALWLKKAYSSPKE-DPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTW 446 (615)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~ 446 (615)
+.++.-++..+.+++..++.+.. ..+.......... ..-...+|++.+.|.+..+++..+++.-+...+...
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~ 303 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF 303 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766666666666655441 1111111100000 001124566778888999999999999999999999
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHHHH-----Hhccc
Q 007159 447 MPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK--GLSITAVRKIMQSIGFLGPAFFLT-----QLSHV 519 (615)
Q Consensus 447 ~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~ 519 (615)
...|.++++|++..+...+..+..+.+++|.+++|++.||+|.| +.+...+ ....++....++ .....
T Consensus 304 ~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l-----~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 304 AGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL-----ILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH-----HHHHHHHHHHHHHhhhcccCcc
Confidence 99999999999999999999999999999999999999999998 4433221 111111111111 11123
Q ss_pred cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccC-ChhHHHHHHHHHHH
Q 007159 520 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYI 598 (615)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~-g~~~~f~~~~~~~l 598 (615)
+...+.+..++.+.+.++.....-..+.+..|+++.+..+|++.+.......+||++.|.+.+.. +.+..+....++.+
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~ 458 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFL 458 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 33444555555555655666666666788889999999999999999999999999999999985 48899999999999
Q ss_pred HHHHHHHHHhcCCcc
Q 007159 599 IGTLVWNLFATGERV 613 (615)
Q Consensus 599 ~~~l~~~~~~~~~k~ 613 (615)
+++++...+..++.+
T Consensus 459 ~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 459 IGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHhhccchhhh
Confidence 998888776555443
No 97
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=6.7e-22 Score=187.14 Aligned_cols=389 Identities=14% Similarity=0.131 Sum_probs=257.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIW 281 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l 281 (615)
.+|...++..++..|-+++..-..+.....+..+.+++.++..++.++|.+...+..+++|++.|| +|.|..-++-+++
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 345566666666666677776666666777888889999999999999999999999999999997 6877766666666
Q ss_pred HHHHHHHHHh---hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc
Q 007159 282 WSVATVLTPV---AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (615)
Q Consensus 282 ~~i~~~l~~~---~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~ 358 (615)
..++.++++. .+ .+|.+++.|++.|+|.-..-.+-+.++..|+..||.+.++|+......+|..+--.+.+++.+
T Consensus 120 v~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 6666665543 33 689999999999999888888999999999999999999999999999999887777777776
Q ss_pred CCCc------hH---HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHH
Q 007159 359 KFGW------PS---VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWAL 429 (615)
Q Consensus 359 ~~gw------~~---~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 429 (615)
..+- .. ..+.++......-++.....--..+..++.-..+ ++...+++ +..+.+ --.|++|.+
T Consensus 198 ~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e-----~g~~Ge~p-kLtdv~--~f~ppfw~~ 269 (459)
T KOG4686|consen 198 TMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLE-----EGFLGEEP-KLTDVN--TFYPPFWVL 269 (459)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhh-----cCcccCCc-cccccc--ccCccHHHH
Confidence 4320 00 0111111111111111110000000000000000 00000000 000111 125789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHH
Q 007159 430 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGP 509 (615)
Q Consensus 430 ~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 509 (615)
.+..+++..+.+.+.+.-|.++++.+|+|+..++.+.+.......+.+++.|.++||.|++-..+.. .....+.
T Consensus 270 ~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~------a~~~tl~ 343 (459)
T KOG4686|consen 270 VIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS------ACILTLL 343 (459)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH------HHHHHHH
Confidence 9999999999999999999999999999999999999988888999999999999999988432211 0111111
Q ss_pred HHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC-hh-
Q 007159 510 AFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WD- 587 (615)
Q Consensus 510 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g-~~- 587 (615)
+-..+.+.. -+++.. ..+++..........+..+...+|.++.|++.|..+.+.++|-.+.|+++|.+.|.-| |.
T Consensus 344 ~H~~l~Ft~-lsPy~~--m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 344 GHSGLFFTF-LSPYTS--MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred HhhhHHhhh-ccHHHH--HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 111111111 222222 2223333333333334445556677899999999999999999999999999999743 43
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhcC
Q 007159 588 --DVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 588 --~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
..|+..+.+.+....+.+.+.++
T Consensus 421 le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 421 LEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhheecc
Confidence 34555566666665555555443
No 98
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=1.8e-19 Score=176.92 Aligned_cols=389 Identities=16% Similarity=0.164 Sum_probs=239.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
.|..............+.....+...|......|.+..+..++......+..+++..+|.++|++|||+...+..+..++
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v 155 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV 155 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH
Confidence 35555554444444445555556667778888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
..++...++ ++..+.+.|.+.|+|.|. .|...++-.+..|..+|..-+-.. ..+.+|.++...+.-.+..++||||
T Consensus 156 ~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~ 231 (528)
T KOG0253|consen 156 FGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRY 231 (528)
T ss_pred HHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 888888888 788899999999999999 888889999999988888766666 8889999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCc-cccHHH----Hhhh---------------------------hcCCcccc-c
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEE----KRHI---------------------------LGGSISKE-A 411 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~---------------------------~~~~~~~~-~ 411 (615)
.....+....+.+. +++..++.++-.- +.++.+ .+++ ..+.+.+. .
T Consensus 232 ~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~k 310 (528)
T KOG0253|consen 232 LLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAK 310 (528)
T ss_pred HHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccc
Confidence 88776644433333 3333333332110 000000 0000 00000000 0
Q ss_pred cccccHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------hC--CChhHHHHHHHHH
Q 007159 412 VSVIPWKLILSK---APVWALIISHFCHNWGTFILLTWMPTYYNQV-----------------LK--FNLTESGLFCVLP 469 (615)
Q Consensus 412 ~~~~~~~~l~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~-----------------~g--~s~~~~g~~~~~~ 469 (615)
........++.. +..+.++...|...+.+++........++.. .+ .+...--.=..+.
T Consensus 311 e~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllit 390 (528)
T KOG0253|consen 311 EVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLIT 390 (528)
T ss_pred ccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHH
Confidence 111122222221 1222333333433444444333333332221 11 1111111122345
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh-ccccchHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 007159 470 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL-SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQ 548 (615)
Q Consensus 470 ~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (615)
.+....|.++.+++.||+|||+.+. +.++..+++++.+ .........+..+..-.+..+.+........+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMa---------l~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPE 461 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMA---------LSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPE 461 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHH---------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCc
Confidence 6777889999999999999996432 2222222222221 22222222222232233333333333333444
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 549 DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 549 ~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
..|...|+++.|....+..+|+++.|.++ ...+ .+......+.+++++++.++..++.-
T Consensus 462 VyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 462 VYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred ccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeeee
Confidence 45568999999999999999999999998 4444 34444555566666666666555443
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.87 E-value=5.7e-19 Score=188.28 Aligned_cols=396 Identities=14% Similarity=0.069 Sum_probs=252.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh----hcCCchHHHHH-HH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGGKPVLGFG-VI 280 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D----r~Grk~~l~~~-~~ 280 (615)
|+++.+++...-+ .+......+.++++.+++|.+....+++..+..+..++.+|+.|.++| |+|||+.++++ .+
T Consensus 4 ~~li~~~~~~~Gi-q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVASVAAGV-QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 4555544444333 455666677777788999999999999999999999999999999999 59999988774 66
Q ss_pred HHHHHHHHHHhhhccC---------------hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccch--hhHHHHHHHHHH
Q 007159 281 WWSVATVLTPVAARIG---------------LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER--SRSLAFVYSGMY 343 (615)
Q Consensus 281 l~~i~~~l~~~~~~~~---------------~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~ 343 (615)
...++.++++++.+.. .+..+++-.+..++.....++..++++|..|+++| +.++++.+....
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 6666667776655210 02233333445567788888999999999998765 579999999999
Q ss_pred HHHHHHhhhHhhh--hcCC-------------CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCcc
Q 007159 344 LGSVTGLAVSPIL--IQKF-------------GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSIS 408 (615)
Q Consensus 344 lG~~ig~~l~~~l--~~~~-------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (615)
+|.++|+.++++. .+.+ +.++.|++.+++.++..++.....++.+...++...+++.+..+
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~---- 238 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPS---- 238 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhccccc----
Confidence 9999999999865 2211 56888988777777766666665555433211111000000000
Q ss_pred ccccccccHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChh------H----HHHHHHHHHHH
Q 007159 409 KEAVSVIPWKLILS-----KAPVWALIISHFCHNWGTFILLTWMPTYYN-QVLKFNLT------E----SGLFCVLPWLT 472 (615)
Q Consensus 409 ~~~~~~~~~~~l~~-----~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~-~~~g~s~~------~----~g~~~~~~~i~ 472 (615)
+......++++++ .+.++.+++..++..++.+.+..|...|+. +.++-++. + ..+......+.
T Consensus 239 -~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~ 317 (477)
T TIGR01301 239 -KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVV 317 (477)
T ss_pred -ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 0000012233322 357899999999999999999999988876 45553321 1 12333444555
Q ss_pred HHHHHHHHHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHHHHHhccc--------------c----chHHHHHHHHHHh
Q 007159 473 MAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHV--------------R----TPAMAVLCMACSQ 533 (615)
Q Consensus 473 ~~ig~~l~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------~----~~~~~~~~~~~~~ 533 (615)
..+.+++..++.+|+|+ |+....+. ++..+++.... +..... + ....++.+..++.
T Consensus 318 ~~i~s~~l~~l~~~~g~~k~~~~~s~--~~~~~~l~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi 392 (477)
T TIGR01301 318 LGITSIGMEKLCRGWGAGKRLWGIVN--IILAICLAATV---LVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGI 392 (477)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHH--HHHHHHHHHHH---HHHhhhhccccccccccccCcchhhHHHHHHHHHHhhH
Confidence 55677778888999985 43222111 11122221111 111100 0 0223333333444
Q ss_pred hhhhhhhhhhhhhhhccCc--chhhHHHHHHHHHHHHHHHHHHHHhhheeccC--ChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 534 GSDAFSQSGLYSNHQDIGP--RYAGVLLGLSNTAGVLAGVFGTAATGYILQRG--SWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~--~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~--g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
............+.+..++ +..|..+|+.|.+..+.+.+..+..|.+.+.. +...++.+.++.++++.++.++..+
T Consensus 393 ~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 393 PLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred HHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 4433433344445555553 56699999999999999999999999865543 4667888888888888877766655
Q ss_pred CCc
Q 007159 610 GER 612 (615)
Q Consensus 610 ~~k 612 (615)
+.+
T Consensus 473 ~~~ 475 (477)
T TIGR01301 473 RPR 475 (477)
T ss_pred CCC
Confidence 543
No 100
>PTZ00207 hypothetical protein; Provisional
Probab=99.87 E-value=3.2e-19 Score=193.98 Aligned_cols=395 Identities=14% Similarity=0.086 Sum_probs=259.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
.+||..+...+...... .....++.+.+.+.+++|++..+++++.++. ....+++++.|++.||+|+|+++.++.+++
T Consensus 24 ~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34566655555444433 3345567788899999999999999998874 445567888999999999999999999999
Q ss_pred HHHHHHHHhhhc----cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHH-HhhhHhhhh
Q 007159 283 SVATVLTPVAAR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVT-GLAVSPILI 357 (615)
Q Consensus 283 ~i~~~l~~~~~~----~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~i-g~~l~~~l~ 357 (615)
.++.++++++.+ .+++.+.+.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988721 268889999999999999999999999999995 78999999999999999976 454445443
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCc---c--ccHHHHh--h-----------------------------
Q 007159 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP---E--LRAEEKR--H----------------------------- 401 (615)
Q Consensus 358 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~--~----------------------------- 401 (615)
.+|++.|++.+++.++..++++...++++.... + .+++++. .
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 468888888888877766666555444432110 0 0011110 0
Q ss_pred ------------------------hh----------------c----C-C----c----------------------c-c
Q 007159 402 ------------------------IL----------------G----G-S----I----------------------S-K 409 (615)
Q Consensus 402 ------------------------~~----------------~----~-~----~----------------------~-~ 409 (615)
.. + . . . + .
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYI 338 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCC
Confidence 00 0 0 0 0 0 0
Q ss_pred cccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH--HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 410 EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE--SGLFCVLPWLTMAVFANMGGWIADTL 487 (615)
Q Consensus 410 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~--~g~~~~~~~i~~~ig~~l~g~l~dr~ 487 (615)
.+.....+.+.+++..+|++++..+|.......+..-+....+..-|.+... ...+.++.+++..+|++..|++....
T Consensus 339 ~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~ 418 (591)
T PTZ00207 339 APQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS 418 (591)
T ss_pred CCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH
Confidence 0000115566677888999999998887776666666666666632663322 23377899999999999999988444
Q ss_pred hhcc----ccHHHHHHHHHHHHH-HHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHH
Q 007159 488 VSKG----LSITAVRKIMQSIGF-LGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLS 562 (615)
Q Consensus 488 g~~~----~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~ 562 (615)
.+|+ +.+. +.+.+.. +..+.+++.+..+ ...+.+..++.+.+.+...........+.+. ++-|+-.-+.
T Consensus 419 ~~~~~~~r~prt----~~l~~~~~~~~~~lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~ 492 (591)
T PTZ00207 419 QKRRAEDRVPIT----IALFIPSVCIITMLTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFC 492 (591)
T ss_pred Hhhccccccchh----HHHHHHHHHHHHHHHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHH
Confidence 3333 2221 2222222 2222222222222 1234444444444444333333333444455 7777777777
Q ss_pred HHHHHHHHHHH-HHHhhheecc-------------CChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 563 NTAGVLAGVFG-TAATGYILQR-------------GSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 563 ~~~~~lg~~ig-p~l~G~l~~~-------------~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
.+..-+|..+- -.+.|.++|+ .-++..|++++++++++.++..++.
T Consensus 493 ~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 493 FLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 77777776665 5677888864 1278899999999999888766543
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.87 E-value=2.1e-19 Score=193.96 Aligned_cols=334 Identities=15% Similarity=0.109 Sum_probs=212.1
Q ss_pred hHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh----cCC-chHHHHHHHHHHHHHHHHHhhhccC----hHH
Q 007159 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTPVAARIG----LPF 299 (615)
Q Consensus 229 ~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr----~Gr-k~~l~~~~~l~~i~~~l~~~~~~~~----~~~ 299 (615)
..+.+.+.+|+++.++|.+.++..+..++..|+.|.++|| +|| |+.++.+.+..+++.++....+..+ +.+
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3455778899999999999999999999999999999999 777 4566677777777766555444211 345
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcc-cccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-------CCCchHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGS 371 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-------~~gw~~~f~~~~~ 371 (615)
+++..++.+.+......+..++.+++. +++||.+..++...+..+|..+++.+...+.. ..+|+..+.+.++
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~i 191 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGL 191 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 566666777777777788889999987 46889988888888888887777765443332 2468878877777
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
+..+..++.+...+++.+++++.+ ......++.+++++.++.+++..++............+.|.
T Consensus 192 i~~v~~~~~~~~~~e~~~~~~~~~---------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~ 256 (444)
T PRK09669 192 LGVVLFFCCFFMTKERYTPEVDNS---------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYV 256 (444)
T ss_pred HHHHHHHHHhCCeEEecCCCCcCC---------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheee
Confidence 766655544443333211111000 00112567788999988887776666555544444444444
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMA 530 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 530 (615)
+...+ +....+.+.....+..+++.++.+++.||+++|+....+. +........+.... .+..+ +.+..++
T Consensus 257 ~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~i 328 (444)
T PRK09669 257 NYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTI------VAFVILSALIFFIP-PSNVWLIFALNIL 328 (444)
T ss_pred eeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH------HHHHHHHHHHHHhC-cchHHHHHHHHHH
Confidence 43333 3334445555566777888889999999999886443221 11111111111222 23333 3333333
Q ss_pred HHhhhhhhhhhhhhhhhhc-c-------CcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 531 CSQGSDAFSQSGLYSNHQD-I-------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~-~-------~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
.+.+..... +.......+ . +.+..|...|..+.+..+|..+|+.+.|.+.+..||
T Consensus 329 ~g~~~~~~~-~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 329 FNFIQNLTT-PLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHH-HHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333333333 333333322 2 234567889999999999999999999999987766
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.85 E-value=1.3e-17 Score=178.57 Aligned_cols=390 Identities=13% Similarity=0.131 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-CCchHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIWWSVAT 286 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-Grk~~l~~~~~l~~i~~ 286 (615)
+..++...+...+..+.+...+|.+ .+++|++..+.+.+.+.+.....++++++|+++||+ |||++++++.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3444444444455555555566654 567899999999999999999999999999999999 99999999999999988
Q ss_pred HHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhccccc--chhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchH
Q 007159 287 VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 287 ~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
++++.... +...+.+...+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+.+||++
T Consensus 91 lll~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 91 VVLGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred HHHHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHH
Confidence 76664331 1222444444556677777788889999999865 68889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCC----CCccccHHHHhh---------------hhcCCccccccc-------ccc--
Q 007159 365 VFYSFGSLGSIWFALWLKKAYSSPK----EDPELRAEEKRH---------------ILGGSISKEAVS-------VIP-- 416 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~-- 416 (615)
.|.+.++..++..+.++...+..++ +++..++++... ............ ...
T Consensus 170 ~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
T PRK15462 170 GFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLG 249 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987655433333332221111100 011110000000 000000000000 000
Q ss_pred -----H-HHH--hhhhhHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 417 -----W-KLI--LSKAPVWAL---IISHFCHNWGTFILLTWMPTYYNQVL-----KFNLTESGLFCVLPWLTMAVFANMG 480 (615)
Q Consensus 417 -----~-~~l--~~~~~~~~~---~l~~~~~~~~~~~~~~~~p~~~~~~~-----g~s~~~~g~~~~~~~i~~~ig~~l~ 480 (615)
. +.. -.+++++.+ ++...++...+....+-+..|..+.. |++ ...+++.++..+..++..++.
T Consensus 250 ~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~ 328 (493)
T PRK15462 250 VLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFL 328 (493)
T ss_pred HHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHH
Confidence 0 000 001122222 22222233333333445555655532 222 224566677777777777777
Q ss_pred HHHHHHhhh--cccc---HHHHHHHHHHHHHHHHHHHHHHhcc---ccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCc
Q 007159 481 GWIADTLVS--KGLS---ITAVRKIMQSIGFLGPAFFLTQLSH---VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP 552 (615)
Q Consensus 481 g~l~dr~g~--~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (615)
+++-.|..+ |... ..+.......++++.+.+....... .+..+++...++...+.....+.......+..|+
T Consensus 329 a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~ 408 (493)
T PRK15462 329 AWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP 408 (493)
T ss_pred HHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH
Confidence 777666633 2221 1222222223333222221111111 2334455555566667767777777777777788
Q ss_pred chhhHHHHHHHHHH-HHHHHHHHHHhhheecc------------CChhHHHHHHHHHHHHH
Q 007159 553 RYAGVLLGLSNTAG-VLAGVFGTAATGYILQR------------GSWDDVFKVAVVLYIIG 600 (615)
Q Consensus 553 ~~~g~~~gl~~~~~-~lg~~igp~l~G~l~~~------------~g~~~~f~~~~~~~l~~ 600 (615)
+.+|..+|+..... .+|..++..+.+...+. ..|...|...+...++.
T Consensus 409 ~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 409 GVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999986643 57777776666655311 13566777777655544
No 103
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=1e-18 Score=192.66 Aligned_cols=332 Identities=15% Similarity=0.122 Sum_probs=210.9
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcc
Q 007159 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~ 313 (615)
.+.+..+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.++++ +++.+++.|++.|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 456677888899999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCC---
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE--- 390 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--- 390 (615)
.......++.|++++++|+.+..+ ......++.+++++++++.. +|||.+++..+..++.+++++ ..++.++-
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~-l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWF-LPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH-ccCcChHHHHH
Confidence 999999999999999999999999 88888888889999988887 899999998888776665533 23232221
Q ss_pred Ccccc--HHHHhhhhc---CCcc----------------ccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 391 DPELR--AEEKRHILG---GSIS----------------KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 391 ~~~~~--~~~~~~~~~---~~~~----------------~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
+.+.+ .+..++..+ .... ....+...+..+++.+.+....+...+..+.......-++
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~- 342 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLS- 342 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhh-
Confidence 00000 000000000 0000 0000112344555555433333333332222222222222
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch-HHHHHH
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLC 528 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 528 (615)
+....+|.+.. ....+.+.....+....+...|++|||...... ..+...++........... .+....
T Consensus 343 ~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (521)
T KOG0255|consen 343 LNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLS-------LFLAGIGLLLFGWLPDDLGGWLHWIL 412 (521)
T ss_pred hhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHH-------HHHHHHHHHHHHHhhccchhHHHHHH
Confidence 22222443332 333344446666777778999999887433211 1111111111111111111 122222
Q ss_pred HHHHhhhhh-hhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 529 MACSQGSDA-FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 529 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
..++.+... ..........+.+|...|..+.+..+....+|.+++|.+.-....
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 413 PLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222 222333445556677999999999999999999999998765544
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.85 E-value=2.7e-19 Score=193.56 Aligned_cols=381 Identities=10% Similarity=-0.032 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHhhhhhHHH-HhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcC-----CchHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMS-IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPVLGFGVIW 281 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~G-----rk~~l~~~~~l 281 (615)
.+.++...++..+.. .... ...+.+.+++|++..+++...++..++..+-.+ +|+++||++ ||+.++++.++
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 445555566777777 4444 445556678999999999999999999999666 999999997 77777777766
Q ss_pred HH-HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHH---HHHHHHHHHHHHHHhhhHhhhh
Q 007159 282 WS-VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSL---AFVYSGMYLGSVTGLAVSPILI 357 (615)
Q Consensus 282 ~~-i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~lG~~ig~~l~~~l~ 357 (615)
.. +.....+..++ ......+..++.+++.+...++..++..|..+ +++.... ++......+|.++|+.++|.+.
T Consensus 105 ~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 105 GSAILYGLLPGKVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHhcccccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 63 43333333331 23344457889999999999999999999997 5444433 3333445589999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHH---hhhhcCCccccccccccHHHHhhhhhHHHHHHHHH
Q 007159 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK---RHILGGSISKEAVSVIPWKLILSKAPVWALIISHF 434 (615)
Q Consensus 358 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 434 (615)
+.++|+..|++.+++.++..+......++++...++..+++. .....+............+..+++|.++...+..+
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fif 262 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIF 262 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 999999999988877766644333332221000111000000 00000000000000113444567777777555555
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Q 007159 435 C-HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFL 513 (615)
Q Consensus 435 ~-~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l 513 (615)
+ ..........++ .+..+.+|+++...|.+....+++.+++..+.+++.+|++.|+.+. ++.+..++..
T Consensus 263 l~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~---------~~~~l~~~~~ 332 (468)
T TIGR00788 263 LSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFG---------VTTLLYTLSS 332 (468)
T ss_pred HHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHH---------HHHHHHHHHH
Confidence 5 222111111110 1233458999999999999999999999999999988888774332 2222211111
Q ss_pred HHh-----c------cccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 514 TQL-----S------HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 514 ~~~-----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
... . ......+.....+...+......+......+..+++..|+..++.+.+.++|..+++.++|++.+
T Consensus 333 ~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 333 LFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred hCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100 0 01111122222333333334444555556777888999999999999999999999999999999
Q ss_pred cCC-----hhHHHHHHHHHHHHHHH
Q 007159 583 RGS-----WDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 583 ~~g-----~~~~f~~~~~~~l~~~l 602 (615)
..| ++..+.+..+..+..++
T Consensus 413 ~~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 413 TIGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred HcCCCcccccchHHHHHHHHHHHHH
Confidence 877 77776665555544443
No 105
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.84 E-value=1.3e-18 Score=177.86 Aligned_cols=278 Identities=10% Similarity=0.034 Sum_probs=193.9
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC----------------
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK---------------- 359 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~---------------- 359 (615)
+++.+++.-++.|.|.+...+..+.++++..++|++++.+++.+...++|..+||++++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 6788999999999999999999999999999999999999999999999999999999987732
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHH
Q 007159 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWG 439 (615)
Q Consensus 360 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~ 439 (615)
..|++.|++.+.+..+..+++.+...++.+++ +.++...+ +. ...+..+++|.++...+..+++...
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~-~~~~~~~~---------~~---~~~~~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEA-DVARVSSG---------DT---TQKTSAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc-cccccccc---------cc---cchhhHHhhHHHHHHHHHHHHHHHH
Confidence 36899999777665555554443322111111 10000000 00 0122356778888888888887778
Q ss_pred HHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhc
Q 007159 440 TFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 517 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~--~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 517 (615)
......|++.|+.+. +|+++.+.+...+.+..+.++|+++.+++.||++.++.+.... .+..+. ..+...
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~-----~l~~~~--~~l~~~- 227 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA-----FLAVLL--SIGAAL- 227 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH-----HHHHHH--HHHHHH-
Confidence 999999999999864 6999999999999999999999999999999999886433211 111111 111111
Q ss_pred cccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHH
Q 007159 518 HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 597 (615)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~ 597 (615)
.+.....+...+++.+.....+.......+.. +++.+++.++. ....+|+.++|++.|.+.|..|.+..|++..++.
T Consensus 228 -~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~-~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 228 -THGYVAMWFVLALGLFNSIMFPTIFSLALNAL-GRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 12222233333444444444444443444443 44566777775 6778999999999999999989888877544443
No 106
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.5e-20 Score=190.31 Aligned_cols=395 Identities=15% Similarity=0.168 Sum_probs=252.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhc-C-------CCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchH
Q 007159 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF-N-------WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPV 274 (615)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-g-------~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~ 274 (615)
+++.+.+.+.-.+++...++...++...+.+...+ | +++...+.+..+..+|.+++|++.|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 45566777777788888888888888887765544 1 456677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccC-----hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007159 275 LGFGVIWWSVATVLTPVAARIG-----LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (615)
Q Consensus 275 l~~~~~l~~i~~~l~~~~~~~~-----~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig 349 (615)
+...++++.++++++++....+ ..++.+.|++.|+|.|.-+|...++.+|...++.||...+.+.+....|.+.|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999998777654221 36788999999999999999999999999999999999988888777777777
Q ss_pred hhhHhhhhc----CC-----------CchHHHHHHHHHHHHHHHHHHhhhcCCCCCC----ccccH--HHHhhhhcC---
Q 007159 350 LAVSPILIQ----KF-----------GWPSVFYSFGSLGSIWFALWLKKAYSSPKED----PELRA--EEKRHILGG--- 405 (615)
Q Consensus 350 ~~l~~~l~~----~~-----------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~--- 405 (615)
.+++-.+.. .+ =||..|.+.++..++.+.. -...++.+.-+ ++.+. ++.++....
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~ 275 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYTALVSKKLKQAAGDMKKVLSVDIE 275 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHHHHhhcCHhhhhhccccccccccc
Confidence 666554431 11 1887776544443333222 22222221111 00000 000000000
Q ss_pred -C-----ccccccc-cccHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH--------HHH
Q 007159 406 -S-----ISKEAVS-VIPWKLILSK---APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL--------FCV 467 (615)
Q Consensus 406 -~-----~~~~~~~-~~~~~~l~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~--------~~~ 467 (615)
. ..+.+.. ...+...+.. +.+...+...|+.-.+++....+....++. .|+.+...-. ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHH
Confidence 0 0000000 0112112211 344555666777777778777777777765 4655443322 111
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccc----hHHHHHHHHHHhhhhhhhhh-
Q 007159 468 LPWLT-MAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT----PAMAVLCMACSQGSDAFSQS- 541 (615)
Q Consensus 468 ~~~i~-~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~- 541 (615)
+...+ .+.|-.+..++.|++||+.. ...+++++.++.+.+..+.. ..-.+++..+..++..+.+.
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~i---------q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ 425 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYI---------QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNA 425 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHH---------HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCc
Confidence 22222 22244455678999999943 33444444444333332222 11111222222222223222
Q ss_pred -hhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec-----cCChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 542 -GLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-----RGSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 542 -~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~-----~~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
......+..|.+.|++..|+....+-.|+++|....+++.+ ..+...++++.+++++++.+..+++.
T Consensus 426 ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 426 TTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred eeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 22334555667999999999999999999999999999999 68999999999999999988877665
No 107
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=1.3e-18 Score=176.63 Aligned_cols=397 Identities=16% Similarity=0.147 Sum_probs=282.1
Q ss_pred cccCchhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHH
Q 007159 199 WEQFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFG 278 (615)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~ 278 (615)
.+..+|||.+++.+.+..+...+.+..+++........+| +...+-|...+|.+.+....+++-|+.||+|-|..++++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 3466789999888888888777777777777777777888 777788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcc----ChH--HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhh
Q 007159 279 VIWWSVATVLTPVAARI----GLP--FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (615)
Q Consensus 279 ~~l~~i~~~l~~~~~~~----~~~--~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l 352 (615)
.++.+++..+-..+... .++ +...+..+.+.+.-........+..-||+++||..+..+-..+..+|.++|.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999999876655422 233 667888888888888877777888999999999999999999999999999998
Q ss_pred HhhhhcCC------CchH--HHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhh
Q 007159 353 SPILIQKF------GWPS--VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKA 424 (615)
Q Consensus 353 ~~~l~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 424 (615)
.+.+..+- .|.. .|+..+++..+.+++..+..+++|+..+........ +..-....+..++++
T Consensus 196 ppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n~ 266 (480)
T KOG2563|consen 196 PPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKNR 266 (480)
T ss_pred cceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcCc
Confidence 88887654 2433 344445555444444444444444433322222111 001223567788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 504 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~ 504 (615)
.+..+.+.+......++...+.+-.-+.. -|.+...+|....+..+++++++.+.|.+.||.+..+.... .....
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~----v~~~~ 341 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTL----VLYLF 341 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH----HHHHH
Confidence 88888777666665566655555433333 46676788999999999999999999999999876653221 11111
Q ss_pred HHHH-HHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 505 GFLG-PAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 505 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
.+.. +.+...........++...+..++.+..+..+...-...+...|..-++..|+.++.+.+-+.+-..+.+...+.
T Consensus 342 ~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 342 ALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred HHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 1111 111112222234445556666667776666676666677778888888999999999999999999999999987
Q ss_pred CC----hhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 584 GS----WDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 584 ~g----~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
.+ +...-+.+...++++.++..+++.+
T Consensus 422 ~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 422 LGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred cCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 66 6655566666666666665555443
No 108
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=8.8e-18 Score=182.69 Aligned_cols=353 Identities=12% Similarity=0.071 Sum_probs=218.6
Q ss_pred HhhhhhHHHHhHH-HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh----hcCC-chHHHHHHHHHHHHHHHHHhh
Q 007159 219 CNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGG-KPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 219 ~~~~~~~~~~~~~-~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D----r~Gr-k~~l~~~~~l~~i~~~l~~~~ 292 (615)
..+....+..+++ .+.+.+|+++..+|.+..+.-+.-++..|+.|.++| |+|| |+.++++.+..+++.+++...
T Consensus 18 ~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~ 97 (473)
T PRK10429 18 KDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA 97 (473)
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC
Confidence 3344444444444 456677999999999999999999999999999999 5698 667777888877776665443
Q ss_pred hccC----hHHHHHHHHHHHhhhcchhhHHHHHhhhcc-cccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-------CC
Q 007159 293 ARIG----LPFLLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KF 360 (615)
Q Consensus 293 ~~~~----~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-------~~ 360 (615)
+..+ +..+++..++.+++......+..++..++. +++||.+..++...+..+|..+++.+...+.+ ..
T Consensus 98 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~ 177 (473)
T PRK10429 98 HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGF 177 (473)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 3111 334556666778888888889999999988 58899999998777777776666555443322 12
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHH
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGT 440 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 440 (615)
+|+...++.+++..+..++.+...++.+.++....+++ ++......++.+++|+.++.+++..++.....
T Consensus 178 g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~ 247 (473)
T PRK10429 178 GFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEG----------SHLTLKDIVALIYKNDQLSCLLGMALAYNIAS 247 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccc----------cCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 46666666666555544444443333221111000000 00001123455678888888888777777666
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 441 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 441 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
.....+.+.|++...+ +....+.+.....++.+++.++.+++.||+|+|+....+. .+..++.+. .....+....
T Consensus 248 ~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~--~~~~~~~~~--~~~~~~~~~~ 322 (473)
T PRK10429 248 NIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS--IFPVLSCGV--LLLMGLAAPH 322 (473)
T ss_pred HHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH--HHHHHHHHH--HHHHhccCch
Confidence 6666666655554433 5566677777777888999999999999999987544221 111111111 1111111222
Q ss_pred chHHHH-HHHHHHhhhhhhhhhhhhhhhhc-------cCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 521 TPAMAV-LCMACSQGSDAFSQSGLYSNHQD-------IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 521 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
..+..+ ..++.+.+.............+. .+.+..|..+|....+..++..+++.+.|++.+..||
T Consensus 323 ~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 323 NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 233322 22333333322222222222222 2245567799999999999999999999999886655
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.82 E-value=1.2e-17 Score=180.67 Aligned_cols=344 Identities=13% Similarity=0.066 Sum_probs=202.9
Q ss_pred hhhhhHHHHh-HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc----CCchH-HHHHHHHHHHHHHHH-Hhh
Q 007159 220 NMDRVNMSIA-ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF----GGKPV-LGFGVIWWSVATVLT-PVA 292 (615)
Q Consensus 220 ~~~~~~~~~~-~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~----Grk~~-l~~~~~l~~i~~~l~-~~~ 292 (615)
........++ .+.+.+.+|++..++|++.++..+..++..+++|+++||. |||+. +..+.+...+..++. ...
T Consensus 21 ~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 100 (448)
T PRK09848 21 NFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence 3333333333 3456677899999999999999999999999999999996 66664 455555444444332 221
Q ss_pred hc----cChHHHHHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHH-----HHHHHHHhhhHhhhhcCC--
Q 007159 293 AR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGM-----YLGSVTGLAVSPILIQKF-- 360 (615)
Q Consensus 293 ~~----~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~-----~lG~~ig~~l~~~l~~~~-- 360 (615)
.. .....+++..++.+++.+...++..++..+... +++|.+..++-..+. .++.+++|.+++......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~ 180 (448)
T PRK09848 101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVS 180 (448)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 11 112334455567788888888877777776654 467887766654432 345556666655432211
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHH
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGT 440 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 440 (615)
+|.....+.+++..+..++.....+++.+++.+. ......++.++++|.++...+..++...+.
T Consensus 181 ~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~ 244 (448)
T PRK09848 181 VYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----------------PSLKISLQTLKRNRPLFMLCIGALCVLIST 244 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 1211112222222222222222222221111000 001124677889999998888888888777
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 441 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 441 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
.......|.|+++.+|.+....++......++.+++.++.+++.||+++++.+..+. . +...+.....+....
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~--~-----~~~i~~~~~~~~~~~ 317 (448)
T PRK09848 245 FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGA--L-----LGTCGYLLFFWVSVW 317 (448)
T ss_pred HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--H-----HHHHHHHHHHHcCch
Confidence 777778888888888887766665555556677888999999999999886544322 1 111111111121112
Q ss_pred chHHH-HHHHHHHhhhhhhhhhhhhhhhhccC-------cchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 521 TPAMA-VLCMACSQGSDAFSQSGLYSNHQDIG-------PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 521 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
..+.. +...+.+.+.............+..+ .+..|...|+.+....+|..+|+.+.|.+.+..||
T Consensus 318 ~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 318 SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22333333333333332222222222 23569999999999999999999999998876655
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=7e-18 Score=181.24 Aligned_cols=340 Identities=17% Similarity=0.231 Sum_probs=239.5
Q ss_pred HhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh----hcCCch-HHHHHHHHHHHHHHHHHhh-h-cc----C
Q 007159 228 IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGGKP-VLGFGVIWWSVATVLTPVA-A-RI----G 296 (615)
Q Consensus 228 ~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D----r~Grk~-~l~~~~~l~~i~~~l~~~~-~-~~----~ 296 (615)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||+ .++++.+..+++.+++... + .. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3455577888999999999999999999999999999999 799655 5667888888888777655 3 11 1
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-------CchHHHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-------GWPSVFYS 368 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~-------gw~~~f~~ 368 (615)
..++++..++..++......+..++..|+.+ ++||.+..+.-..+..+|.++...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2345677777799999999999999999997 578999999988888888876666666655422 58888888
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
.+++.++..++.....++.+.+.++.++ +..-...++.+++||+++.+.+..++...+........+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK-------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc-------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 8888777777766665551111111100 001122567788999999999888888888888888888
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC 528 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 528 (615)
.|.+..+|.+ ...+.+.....+..+++.++.+++.||+|+|+....+. .+..++. +.+......+.....+..
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~i~~ 322 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGL--LLAALGF----LLLFFLGPGSPWLVLILF 322 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhH--HHHHHHH----HHHHHHHhhhHHHHHHHH
Confidence 8888888877 56677777888999999999999999999998655332 1111111 111111112333344444
Q ss_pred HHHHhhhhhhhhhhhhhhhhcc-------CcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChh
Q 007159 529 MACSQGSDAFSQSGLYSNHQDI-------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 587 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~ 587 (615)
.+.+.+.............+.. +++..|...|+.+.+..++..+++.+.|.+.+..||.
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 4444444333333222233222 2356799999999999999999999999998765543
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=1.2e-16 Score=161.79 Aligned_cols=349 Identities=17% Similarity=0.073 Sum_probs=255.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCch-HHHHHHHHHHHHHHHHHhhhc-cChHHHHHHHHHHHhhhcchhhHHH
Q 007159 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-VLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMN 319 (615)
Q Consensus 242 ~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~-~l~~~~~l~~i~~~l~~~~~~-~~~~~ll~~r~l~G~~~~~~~~~~~ 319 (615)
+..|...++..+..++..|+.|.++|+.|+|| .+....++..+..+++.+++. ..++..++..++..++........+
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 45788889999999999999999999999655 555566666666777777775 3456667777888999999999999
Q ss_pred HHhhhcccccchhhHHHHHHHHHHHHHHHHhhhH--hhh-h---------------cCCCchHHHHHHHHHHHHHHHHHH
Q 007159 320 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--PIL-I---------------QKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 320 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~--~~l-~---------------~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
+++.+..++++.++..++-.....+|..+.-++. ..+ . +...-|.++.+.++..++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 9999999988888887777777777766554442 111 1 223467778777777777777666
Q ss_pred hhhcCCCCCC-ccccH--HHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 007159 382 KKAYSSPKED-PELRA--EEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (615)
Q Consensus 382 ~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s 458 (615)
...++.+... +..+. ...++ -...++++.+++.+..+++..+++.-+..........|....+|++
T Consensus 218 ~~v~~~~~~~~~~~~~l~~g~k~-----------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls 286 (438)
T COG2270 218 LNVHDAEKISSPPPTALRNGFKE-----------LKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLS 286 (438)
T ss_pred hcccccccccccchHHHHHHHHH-----------HHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCcc
Confidence 6666655322 11110 00010 0125677888888999999999999999999999999999889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhh
Q 007159 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAF 538 (615)
Q Consensus 459 ~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (615)
..+..++.....+.+++|.++.|++.+|++.|+++..+. .. ....++..........+.+..++++...++.
T Consensus 287 ~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l-------vi-~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 287 STELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGL-------VI-LSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH-------HH-HHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 999999999999999999999999999999997655332 11 1111112222223334444555556666666
Q ss_pred hhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 539 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 539 ~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
...+-....+.+|+++.++.+|+++..+..+..+||.+.+.+.+. ++.+..+....++.+++.++.+..+.
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~ 430 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKV 430 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecC
Confidence 666666678889999999999999999999999999999999986 55777777777777777776655543
No 112
>PRK11462 putative transporter; Provisional
Probab=99.78 E-value=1.7e-15 Score=163.84 Aligned_cols=333 Identities=12% Similarity=0.056 Sum_probs=207.8
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh----cCCc-hHHHHHHHHHHHHHHHHHhhhccC----hHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGK-PVLGFGVIWWSVATVLTPVAARIG----LPFL 300 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr----~Grk-~~l~~~~~l~~i~~~l~~~~~~~~----~~~l 300 (615)
...+.+.+|+++..+|.+..+.-+.-++..|+.|.++|| +||| +.++++.+..+++.+++...+..+ +..+
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 444677889999999999999999999999999999996 6875 556667777777776665454222 3445
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC-------CCchHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------FGWPSVFYSFGSL 372 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-------~gw~~~f~~~~~~ 372 (615)
++..++..++......+..++.++..+ ++||.+..++...+..+|..+++.+...+.+. .+|+....+.+++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 666677788888888888899998886 78999999999999999888887776554433 2567766666666
Q ss_pred HHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (615)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~ 452 (615)
.++...+.+...+++++++++.. . ....++.+++|+.++.+....++..............|.+
T Consensus 193 ~~i~~~i~~~~~kE~~~~~~~~~--~--------------~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~ 256 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEAPPTTT--S--------------MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVT 256 (460)
T ss_pred HHHHHHHHHhcceeccCCCccCC--C--------------HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhh
Confidence 55555444443333221111000 0 0113556778888777766655555554444444444444
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS 532 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 532 (615)
..+|. ....+.+.....++.+++.++++++.||+++|+...... .......+.+............+..++.+
T Consensus 257 y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 329 (460)
T PRK11462 257 WILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN------ALLAVISLAMFFVPMQASITMFVFIFVIG 329 (460)
T ss_pred hhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH------HHHHHHHHHHHHhchhHHHHHHHHHHHHH
Confidence 44443 334456667777888889999999999999875432111 11111111111111111112222222222
Q ss_pred hhhhhhhhhhhhhhhhcc--------CcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 533 QGSDAFSQSGLYSNHQDI--------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~--------~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
.+. ............+. +.+..|...+....+..+|..+++.+.|.+.+..||
T Consensus 330 ~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 330 VLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222 22222222222222 134456767888888999999999999998876555
No 113
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=1.1e-22 Score=220.00 Aligned_cols=391 Identities=16% Similarity=0.168 Sum_probs=237.0
Q ss_pred HHHHhhhhhHHHHhHHHHH--hhcCCC---------chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 216 FLLCNMDRVNMSIAILPMS--KEFNWN---------STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~--~~~g~s---------~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
.+..+++...++...+... ..++.+ ..+.+++.+...++..+|.+++|.++||+|||+.++++.++..+
T Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i 88 (451)
T PF00083_consen 9 GFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMII 88 (451)
T ss_pred HHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 3555566655555444433 222222 23468999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcc-ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC---
Q 007159 285 ATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--- 360 (615)
Q Consensus 285 ~~~l~~~~~~~-~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~--- 360 (615)
+.++..+++.. +++.++++|++.|++.|...+....++.|..|+++|++..++.+....+|.+++..++..+....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 168 (451)
T PF00083_consen 89 GSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNW 168 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999888733 57789999999999999999999999999999999999999999999999998888776554433
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCCCCC---c---cccH-HHH-------hhhhcCCc---cccccccccHHHHhhh
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKED---P---ELRA-EEK-------RHILGGSI---SKEAVSVIPWKLILSK 423 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~-~~~-------~~~~~~~~---~~~~~~~~~~~~l~~~ 423 (615)
+||+.+++..+..++..+... ..++.|.-- . +.++ .++ ++...+.. .+.......+++++++
T Consensus 169 ~Wr~~~~~~~~~~l~~~~~~~-~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 247 (451)
T PF00083_consen 169 GWRILLIFGAIPSLLVLLLRF-FLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRN 247 (451)
T ss_pred ccccccccccccccccccccc-ccccccceecccccccccccccccccccccccccccccccccccccccceeeeecccc
Confidence 499998877766655444333 333332110 0 0000 000 00000000 0000001235555555
Q ss_pred hh----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHH
Q 007159 424 AP----VWALIISHFCH-NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVR 498 (615)
Q Consensus 424 ~~----~~~~~l~~~~~-~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~ 498 (615)
+. +...+...++. ..+......+.|.++++ .+.+.. -.......+...++.++..++.||+|||+..+.+.
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~- 323 (451)
T PF00083_consen 248 KKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL- 323 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccccccccc-
Confidence 32 22222222222 22223344455555544 566665 12223344555566677779999999997665432
Q ss_pred HHHHHHHHHHHHHHHHHhcccc---chHHHHHHHHHHhhhh-hhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHH
Q 007159 499 KIMQSIGFLGPAFFLTQLSHVR---TPAMAVLCMACSQGSD-AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 574 (615)
Q Consensus 499 ~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp 574 (615)
....++.+..+.........+ .....+...+...... +..+.......+..|.+.|+++.|+...+..++..+++
T Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~ 402 (451)
T PF00083_consen 324 -LLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIP 402 (451)
T ss_pred -ccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111111111110001111110 1111111111111222 22223333346667779999999999999999999999
Q ss_pred HHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcCCc
Q 007159 575 AATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGER 612 (615)
Q Consensus 575 ~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~~k 612 (615)
.+...+.+..+....+.+.++++++..++..++.++.|
T Consensus 403 ~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 403 FLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred cccccccccccccccchhhHHHHHHHHhheeEEEeeCC
Confidence 99999988877556666666666666655555444433
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.75 E-value=5.8e-15 Score=150.22 Aligned_cols=361 Identities=14% Similarity=0.119 Sum_probs=245.7
Q ss_pred HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcC-----CchH-HHHHHHHHHHHHHHHHhhh----c-------c
Q 007159 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPV-LGFGVIWWSVATVLTPVAA----R-------I 295 (615)
Q Consensus 233 i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~G-----rk~~-l~~~~~l~~i~~~l~~~~~----~-------~ 295 (615)
+..|++++...++.+.++..+... ..+.+|..+|+.+ ||.. +..|.++...+..+.+++. . .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998887765 5888999999988 6644 5556666666555544332 1 1
Q ss_pred Ch---HHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH---HHHH
Q 007159 296 GL---PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV---FYSF 369 (615)
Q Consensus 296 ~~---~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~---f~~~ 369 (615)
.+ ....+..++.|+|.+...++..+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.+.-.-. +...
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 11 22344566779999999999999999999999999999999999999999999999998887663222 2222
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (615)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 449 (615)
+++.++..++..+..+++..+.....+ +++......+++++.+|....++...++...+++.--..+-+
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~-----------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAE-----------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCC-----------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 333332222222222211111110000 011111235677888888888888888888888888888999
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 007159 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC 528 (615)
Q Consensus 450 ~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 528 (615)
|--+++|++..+...+......+..+|..+.|++..| .++++... +.+..+.......+..-...+...+....
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~-----~G~~~~~~~f~lii~a~~~~~~~~~~~~~ 308 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAA-----LGCLLGALAFALIILAGPLGSPWLFRPGV 308 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHH-----HHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 9999999999999999999999999999999988774 44433221 11112222221112222222333444455
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc----------CChhHHHHHHHHHHH
Q 007159 529 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR----------GSWDDVFKVAVVLYI 598 (615)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~----------~g~~~~f~~~~~~~l 598 (615)
++++.+.+.+.........+...++..|..+|.....+.++..++..++|.+.|. .+|..+|.+=+++.+
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 5556565556666666677777789999999999999999999999999998873 257777777777777
Q ss_pred HHHHHHHHHhcC
Q 007159 599 IGTLVWNLFATG 610 (615)
Q Consensus 599 ~~~l~~~~~~~~ 610 (615)
++.++..-+.++
T Consensus 389 ~a~~ll~~l~~~ 400 (403)
T PF03209_consen 389 AALVLLGRLDRR 400 (403)
T ss_pred HHHHHHHHhhhh
Confidence 776665544433
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.75 E-value=2e-15 Score=157.87 Aligned_cols=352 Identities=15% Similarity=0.151 Sum_probs=245.3
Q ss_pred HHHhhhhhHHHHhHH-HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh----cCC-chHHHHHHHHHHHHHHHHH
Q 007159 217 LLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTP 290 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~-~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr----~Gr-k~~l~~~~~l~~i~~~l~~ 290 (615)
+...........++. .+.+.+|+++..+|.++.+.-+.-++.-|+.|.++|| +|| |+.++.+.+-.++...++.
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F 101 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF 101 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH
Confidence 333333333444444 4677889999999999999999999999999999997 675 5667778788888888777
Q ss_pred hhhc----cChHHHHHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-------
Q 007159 291 VAAR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQ------- 358 (615)
Q Consensus 291 ~~~~----~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~------- 358 (615)
.+++ ..+...++..++.+++......+..++.+++.+ ++||.+..++-..+..+|.++...+.+.+..
T Consensus 102 ~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~ 181 (467)
T COG2211 102 ITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDK 181 (467)
T ss_pred cCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7763 345667788889999999999999999998875 7899999999999888887766555554443
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHH
Q 007159 359 KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (615)
Q Consensus 359 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 438 (615)
..||+...++.+++..+..+++++..++...+....++..+. +....+..+++|+++...++..++...
T Consensus 182 ~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~-----------~~~~~~~~~~~Nrp~~~~l~~~l~~~~ 250 (467)
T COG2211 182 ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKL-----------KLKDSFLLIFKNRPLLLLLLMNLLLFI 250 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccc-----------cHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 357888888888888777777777666554422211110000 001134467889999888888888777
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007159 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH 518 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 518 (615)
+.....+....|.+..+|.+.............+.+++.++..++.+|+|+|+....+. .+.+.+.....+..
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~-------~~~~i~~~~~~f~~ 323 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL-------LLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH-------HHHHHHHHHHHhhc
Confidence 77777888888888888888888888888888888888999999999999997655331 11111111222222
Q ss_pred ccchHHHHHHHHHHhhhhhhhhhhhhhhhhc--------cCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 519 VRTPAMAVLCMACSQGSDAFSQSGLYSNHQD--------IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
.+...+.++..++.........+.......+ .+.+..|...|.+..+.-+|..++..+.|++.+..||
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344444444333333333333322222222 2346679999999999999999999999999876554
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.72 E-value=6.1e-16 Score=162.00 Aligned_cols=391 Identities=17% Similarity=0.200 Sum_probs=237.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhh--cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCC-chHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKE--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVI 280 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Gr-k~~l~~~~~ 280 (615)
.+|+.+.++.+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++.+..|.+..|.+. |+.++++.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 347788888888888877777776665566666 77888889999999999999999999999999886 888899999
Q ss_pred HHHHHHHHH-Hhhh--ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhh
Q 007159 281 WWSVATVLT-PVAA--RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (615)
Q Consensus 281 l~~i~~~l~-~~~~--~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~ 357 (615)
+..++.++. ++.. +..-++++++|++.|+|.+.. ...-+++++....++|.++++....+..+|.++||.+...+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999887 4332 224578999999999997765 677788888887899999999998888888888888776654
Q ss_pred cC--CC-----------chHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc---cHHHHhhhhcCCccccccccccHHHHh
Q 007159 358 QK--FG-----------WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL---RAEEKRHILGGSISKEAVSVIPWKLIL 421 (615)
Q Consensus 358 ~~--~g-----------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~ 421 (615)
.. .| +...-|+.+++.++.+++.....++...+..+. ..++.+.. .++..... +
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~ 259 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSD----IEKVKKPK------L 259 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccc----hhhhccCC------h
Confidence 31 11 223334455554444444443333332222111 11010000 00000000 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHH----HHHHHHHHHHHHHHHHH-HHhhhccccHHH
Q 007159 422 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCV----LPWLTMAVFANMGGWIA-DTLVSKGLSITA 496 (615)
Q Consensus 422 ~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~----~~~i~~~ig~~l~g~l~-dr~g~~~~~~~~ 496 (615)
.....+.+++..+...+......+..+.+....++++..++-...+ +.++..+...+...... .++.+|+.+..+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 1122334444445555555555666677777777887766544433 33333332222222222 122223222211
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccc---------------------------hHHHHHHH--HHHhhhhhhhhhhhhhhh
Q 007159 497 VRKIMQSIGFLGPAFFLTQLSHVRT---------------------------PAMAVLCM--ACSQGSDAFSQSGLYSNH 547 (615)
Q Consensus 497 ~~~~~~~~~~~~~~~~l~~~~~~~~---------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~ 547 (615)
....+....+.+........ .+..+... .++...-...........
T Consensus 340 -----~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlyS 414 (488)
T KOG2325|consen 340 -----FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYS 414 (488)
T ss_pred -----HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHH
Confidence 01111111111111111010 01111111 111111112222344567
Q ss_pred hccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 548 QDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 548 ~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
+.++|+++++..|++.....++..++|.+...+....|++.++.+.+...++...++.+..++
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~r 477 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLKR 477 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999999999999999988888777777666655443
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.69 E-value=2.9e-14 Score=147.80 Aligned_cols=399 Identities=17% Similarity=0.172 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHh-HHHHHhhcC----CCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIA-ILPMSKEFN----WNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWW 282 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~g----~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~ 282 (615)
+..++..-+.--+..+.+... ...+..+++ ++++++.-+.+.|..-.-+.++++|+++|| +|+|+.+++|.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 344444444444444444333 333444444 999999999999998889999999999999 59999999999999
Q ss_pred HHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccc--hhhHHHHHHHHHHHHHHHHhhhHhhhhcCC
Q 007159 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE--RSRSLAFVYSGMYLGSVTGLAVSPILIQKF 360 (615)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~ 360 (615)
.++.++++.....+...+.++.++.++|.|.+-+....++++.+|+++ |-..++++..+.++|..++|++.+++.+++
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 999999887731245568888899999999999999999999998543 667788999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcC---CC--CCCccccHHHHhhhh--------cCC----cccccc-----------
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKKAYS---SP--KEDPELRAEEKRHIL--------GGS----ISKEAV----------- 412 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~--------~~~----~~~~~~----------- 412 (615)
||...|-+.++-..+.++..+..++. .+ ++............. ... ...+..
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 262 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILI 262 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987666555444443332211 11 111111111100000 000 000000
Q ss_pred ccccHHHHh------h-hhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCC----hhHHHHHHHHHHHHHHHHHH
Q 007159 413 SVIPWKLIL------S-KAPVWALI---ISHFCHNWGTFILLTWMPTYYNQVLKFN----LTESGLFCVLPWLTMAVFAN 478 (615)
Q Consensus 413 ~~~~~~~l~------~-~~~~~~~~---l~~~~~~~~~~~~~~~~p~~~~~~~g~s----~~~~g~~~~~~~i~~~ig~~ 478 (615)
...-+.+.+ . +++.+..+ +...++...+....+.+..|..+..+.+ ....++..++..+..++..+
T Consensus 263 ~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~p 342 (498)
T COG3104 263 AIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSP 342 (498)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHH
Confidence 000000000 1 11222222 2222222222222334444444332222 12345667777788888888
Q ss_pred HHHHHHHHhhhcc--c---cHHHHHHHHHHHHHHHHHHHHHHhc----cccchHHHHHHHHHHhhhhhhhhhhhhhhhhc
Q 007159 479 MGGWIADTLVSKG--L---SITAVRKIMQSIGFLGPAFFLTQLS----HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQD 549 (615)
Q Consensus 479 l~g~l~dr~g~~~--~---~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (615)
+..++..++++++ . ...+....+...++++......... ..+..+++...++...+.....+.......+.
T Consensus 343 I~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~l 422 (498)
T COG3104 343 ILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKL 422 (498)
T ss_pred HHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence 8888888855442 2 1222222333333333332211122 12344556666777777777777877778888
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHhhh------eeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 550 IGPRYAGVLLGLSNTAGVLAGVFGTAATGY------ILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 550 ~~~~~~g~~~gl~~~~~~lg~~igp~l~G~------l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
.|+...+.+++........|..++..+.+. ..+.......|..++...++..++.+..
T Consensus 423 aP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 423 APPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 888888888888777777777777766663 2234566777887777776666555444
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.64 E-value=1.5e-17 Score=180.95 Aligned_cols=375 Identities=14% Similarity=0.180 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
++++++.. +...+....+...+..+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-+.+-+|.++++++.+
T Consensus 5 l~~~~~~~-~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~ 83 (539)
T PF03137_consen 5 LVFLCLLG-LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSL 83 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHH
Confidence 33343333 34456666667788899999999999999999999999999999999999998888889999999999988
Q ss_pred HHHhhh------------------------------------------------ccChHHHHHHHHHHHhhhcchhhHHH
Q 007159 288 LTPVAA------------------------------------------------RIGLPFLLIMRAFMGIGEGVAMPAMN 319 (615)
Q Consensus 288 l~~~~~------------------------------------------------~~~~~~ll~~r~l~G~~~~~~~~~~~ 319 (615)
++++.+ ..-+.+++++.++.|+|.+..++...
T Consensus 84 l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 84 LFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred HHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 765421 00136778899999999999999999
Q ss_pred HHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC---------------------C-chHHHHHHHHHHHHHH
Q 007159 320 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF---------------------G-WPSVFYSFGSLGSIWF 377 (615)
Q Consensus 320 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~---------------------g-w~~~f~~~~~~~~~~~ 377 (615)
+++-|..++++-+..+|+..+...+|.++|-++++.+...+ | |-.-|++.+++.++..
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998765421 1 4445566666666666
Q ss_pred HHHHhhhcCCCCCCccc---cH---HHHhhhhcCCccc---------cccccccHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007159 378 ALWLKKAYSSPKEDPEL---RA---EEKRHILGGSISK---------EAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (615)
Q Consensus 378 ~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 442 (615)
+.++.++++.|...+.. +. ++.+...+..... ...-....+.+++||.+....+...+......+
T Consensus 244 ipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 244 IPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 66665555544441100 00 0000000000000 011133567788999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHH-HHHHHHH-----
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLG-PAFFLTQ----- 515 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i-~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~l~~----- 515 (615)
+.+|+|.|++.+++.++..++++.....+ ++++|.+++|++.+|++.+..-..........+..+. ...+++.
T Consensus 324 ~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~ 403 (539)
T PF03137_consen 324 FATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPP 403 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCc
Confidence 99999999999999999999888766555 5678889999999998654211111111111111111 0000000
Q ss_pred -----hcc------------------------------------c-cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc
Q 007159 516 -----LSH------------------------------------V-RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR 553 (615)
Q Consensus 516 -----~~~------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (615)
... . ..+.+.+..++..........+......+.++++
T Consensus 404 ~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~ 483 (539)
T PF03137_consen 404 IAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPE 483 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChh
Confidence 000 0 0011111222222233333444555567778999
Q ss_pred hhhHHHHHHHHHH-HHHHHHHHHHhhheecc
Q 007159 554 YAGVLLGLSNTAG-VLAGVFGTAATGYILQR 583 (615)
Q Consensus 554 ~~g~~~gl~~~~~-~lg~~igp~l~G~l~~~ 583 (615)
+|+.+.|+..++. -+|.+-||++.|.++|.
T Consensus 484 ~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 484 QRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------
T ss_pred hcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 9999999988776 45789999999999996
No 119
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.60 E-value=7.1e-14 Score=152.19 Aligned_cols=284 Identities=17% Similarity=0.208 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~ 286 (615)
..++++.+..+...+....+...+..+.+.|+++..+.|++.+.+-++..+...+..+..-|.-|-+++-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34445555666666776777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-----------c-------c--------------------------------ChHHHHHHHHHHHhhhcchhh
Q 007159 287 VLTPVAA-----------R-------I--------------------------------GLPFLLIMRAFMGIGEGVAMP 316 (615)
Q Consensus 287 ~l~~~~~-----------~-------~--------------------------------~~~~ll~~r~l~G~~~~~~~~ 316 (615)
+++++.+ . . .+.+++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 9877542 0 0 123677889999999999999
Q ss_pred HHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC------------------C-chHHHHHHHHHHHHHH
Q 007159 317 AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------------------G-WPSVFYSFGSLGSIWF 377 (615)
Q Consensus 317 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~------------------g-w~~~f~~~~~~~~~~~ 377 (615)
...+++-|...+++-+..+|+......+|.++|-++++++...+ | |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876421 1 5555677777777777
Q ss_pred HHHHhhhcCCCCCCccccHHHHhhhhcCC---ccccc--c----ccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 378 ALWLKKAYSSPKEDPELRAEEKRHILGGS---ISKEA--V----SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (615)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~----~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 448 (615)
+.++.++++.|+..++...++.+....+. ..... + -....+.+++||.+....+...+....+.++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 77777776666544321111111111100 00000 0 123467788999999999999999999999999999
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhc
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLT-MAVFANMGGWIADTLVSK 490 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~-~~ig~~l~g~l~dr~g~~ 490 (615)
-|++..+|.++..+..+....++. ..+|.+++|++.+|+..+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999988655544 567888999999988654
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.59 E-value=3.9e-13 Score=142.99 Aligned_cols=360 Identities=17% Similarity=0.125 Sum_probs=234.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCch-hhHHHHHHH----HHHHHHHHHhhHHhhhhcCCchHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNST-TVGLIQSSF----FWGYLLTQIVGGIWADKFGGKPVLGFGVI 280 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~-~~g~i~s~~----~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~ 280 (615)
+.+....++-.+..++.........+.....++.... ..+...... .+..++..+..|.++||+|||..+....+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 4455555666666666665556666665555543222 233333333 67788899999999999999999999999
Q ss_pred HHHHHHHHHHhhhccChHHHHHHHHHHHhh--hcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc
Q 007159 281 WWSVATVLTPVAARIGLPFLLIMRAFMGIG--EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (615)
Q Consensus 281 l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~ 358 (615)
...+..+...+.. +|.++ +.|+. .+.......++++|....++|...+|+.......+..++|.+++.+..
T Consensus 101 ~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 101 GTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 8888887776664 43333 33332 244567788899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCcc--ccccccccHHHHhhhhhHHHHHHHHHHH
Q 007159 359 KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSIS--KEAVSVIPWKLILSKAPVWALIISHFCH 436 (615)
Q Consensus 359 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 436 (615)
..|.-.+|++..+..++..+......+++..++++.. ........+... .........+..-.+|..+.+++..+..
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS 252 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence 9999999998888777777666666665544333221 000000000000 0000000111112234444444444444
Q ss_pred HHHHHHHHH-HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHH
Q 007159 437 NWGTFILLT-WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG-WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT 514 (615)
Q Consensus 437 ~~~~~~~~~-~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 514 (615)
......-.. ..+.|+...++++..+.+.+.+...+...++.++.. .+...++.++. +.+++..-.+...
T Consensus 253 ~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~---------i~lGl~~~~~~~~ 323 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRL---------ISLGLLSEFLQLL 323 (463)
T ss_pred HHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH---------hhHHHHHHHHHHH
Confidence 333332222 346777888999999999999998888888887766 77777887752 2233333333333
Q ss_pred HhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 515 QLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
...+....+................+...........++++|+++++...+..+...++|.+.+.+..
T Consensus 324 ~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 324 LFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 33344444544444444444444444444455666788999999999999999999999999998864
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.56 E-value=1.8e-12 Score=130.21 Aligned_cols=250 Identities=14% Similarity=0.138 Sum_probs=175.3
Q ss_pred hhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHH
Q 007159 220 NMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF 299 (615)
Q Consensus 220 ~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ 299 (615)
.......+|+.-.+.+++|++..+++.++...+...++..++.|.++||+|||+.-++..++++++.+..- .+ +++.
T Consensus 47 ~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~--~~~~ 123 (354)
T PF05631_consen 47 MAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SS--NYPV 123 (354)
T ss_pred HHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-cc--ccHH
Confidence 34555567777777789999999999999999999999999999999999999999999999988886543 34 7899
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcc-----cccchhhHHHHHH-HHHHHHHHHHhhhHhhhhcCCCc--hHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWI-----PVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGS 371 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~-----~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l~~~~gw--~~~f~~~~~ 371 (615)
+++.|++.|++.+..+.+-.+++..-. |++..+..++... ...++-.+++.+++.++.+..+. ..+|.....
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~ 203 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIV 203 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHH
Confidence 999999999999999999988765433 2222333444333 33445556666677777766554 778876666
Q ss_pred HHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (615)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~ 451 (615)
+.++..++.....+++..+..+..+..+.. ...++.++++|+++.+.+...++-..++.+.....+.+
T Consensus 204 ~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL 271 (354)
T PF05631_consen 204 LLAVAAVLILKTWPENYGDTSSSSSLSGSF------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPAL 271 (354)
T ss_pred HHHHHHHHHHhcccccCCCcccccchHHHH------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeecee
Confidence 666555555444444332211111111000 11456678899999999999998888887766444433
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT 486 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr 486 (615)
+. +-...-.|++++.+.+..++|+.+..++..+
T Consensus 272 ~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 272 DP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred cC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 31 1123447899999999999999888766554
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.50 E-value=3.1e-12 Score=136.88 Aligned_cols=374 Identities=11% Similarity=0.045 Sum_probs=221.0
Q ss_pred HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcC-----CchHHHHHHHHHHHHHHHHHhhhc--cChHH
Q 007159 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPVLGFGVIWWSVATVLTPVAAR--IGLPF 299 (615)
Q Consensus 227 ~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~G-----rk~~l~~~~~l~~i~~~l~~~~~~--~~~~~ 299 (615)
....+.+.+++|+++.++....++..+...+ -++.|.++|-+. ||+-++++.++..++.+.++..+. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456778899999999999998888888766 456699999863 556666677776555555554332 23555
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhccc--ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIP--VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWF 377 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 377 (615)
..++.++..+|.+.....+.+++.|... +++++...+.......+|.+++..++|.+.+..++++.|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6677788899999999999999999874 34467778888888999999999999999999999999988877766665
Q ss_pred HHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Q 007159 378 ALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLK 456 (615)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~~~~~~~~~~~~~p~~~~~~~g 456 (615)
+..+...++.+...........++................++.++.+.+|...+ ..++............-.+..+..+
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~ 248 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG 248 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc
Confidence 554444443111111000000000000000000111224455666676766555 2222211111100000001122345
Q ss_pred ---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHH--Hhc--------cccchH
Q 007159 457 ---FNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT--QLS--------HVRTPA 523 (615)
Q Consensus 457 ---~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~--------~~~~~~ 523 (615)
+++...+.+..+..++.++|..+..+...+...|+++ ....++.....+. .+. .++...
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~--------~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIF--------VVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH--------HHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 8888888887777777777776666555444444322 1111111111111 110 011111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC--------hhHHHHHHHH
Q 007159 524 MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS--------WDDVFKVAVV 595 (615)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g--------~~~~f~~~~~ 595 (615)
...-..+.......-..+......+..|+..-|+.+++...+.++|..++..++..+.+..+ .....+++.+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 11122223333333344455556777788999999999999999999999999999887644 3444555555
Q ss_pred HHHHHHHHHHHHhc
Q 007159 596 LYIIGTLVWNLFAT 609 (615)
Q Consensus 596 ~~l~~~l~~~~~~~ 609 (615)
+.++.+.+..++.+
T Consensus 401 ~~ll~l~ll~lLp~ 414 (433)
T PF03092_consen 401 IQLLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 55555544444444
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=9.6e-13 Score=140.78 Aligned_cols=162 Identities=17% Similarity=0.239 Sum_probs=131.9
Q ss_pred HHHhHHHHHhhcCCCc--------hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhc--c
Q 007159 226 MSIAILPMSKEFNWNS--------TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--I 295 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~--------~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~--~ 295 (615)
.....+.+.++.|.++ ...+.+.++..++..++.++.|++.||+|+|+++.++.++.+++..+...... .
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 3345566666666543 66799999999999999999999999999999999999998888766665321 1
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHH-HHHHHHHHHHhhhHhhhhcC------CCchHHHHH
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQK------FGWPSVFYS 368 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l~~~------~gw~~~f~~ 368 (615)
+++.+++.+++.|++.+...+....++.+++|+++|++++|+.+ ....+|.++||+++|++.++ +||+++|++
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 23556778999999999988999999999999999999999997 67889999999999999887 469999998
Q ss_pred HHHHHHHHHHHHHhhhcCC
Q 007159 369 FGSLGSIWFALWLKKAYSS 387 (615)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~ 387 (615)
.+++.++..+++++..+++
T Consensus 387 ~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHhCCc
Confidence 8877777666666555543
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.46 E-value=5.1e-13 Score=118.94 Aligned_cols=134 Identities=26% Similarity=0.476 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhccc
Q 007159 248 QSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP 327 (615)
Q Consensus 248 ~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~ 327 (615)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.+ +.+.+++.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4456778889999999999999999999999999888888877776 77888999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 328 ~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
+++|++.+++......+|..++|.+.+.+.+..+|++.|++.+++.++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999998877766655555443
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.46 E-value=1.1e-12 Score=137.65 Aligned_cols=150 Identities=12% Similarity=0.080 Sum_probs=127.8
Q ss_pred HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHH
Q 007159 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (615)
Q Consensus 227 ~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l 306 (615)
....+.+.++++.+..+.+++.+++.++..++.++.|++.||+|||+.+.++.++..++.++..+.+..+...+++..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 34455567889999999999999999999999999999999999999999998888888877766653223334556778
Q ss_pred HHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q 007159 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (615)
Q Consensus 307 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 376 (615)
.|++.+...+....++.|.+|+++|++++|+......+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888888888888899999999999999999999999999999999999999999999998877665543
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=6e-12 Score=133.91 Aligned_cols=159 Identities=19% Similarity=0.202 Sum_probs=130.9
Q ss_pred HHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
....++.+.++.|. ...++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.+ +.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 33445555556665 3456777888899999999999999999999999998888888887777766 6667788899
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhc
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
+.|++.+...+.....+.+.+|+++|++++++++....+|..+++.+.|.+.+..||++.|++.+++.++..++.....+
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999888777766655555444
Q ss_pred CCC
Q 007159 386 SSP 388 (615)
Q Consensus 386 ~~~ 388 (615)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 333
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.41 E-value=2.9e-12 Score=137.32 Aligned_cols=151 Identities=11% Similarity=0.079 Sum_probs=128.4
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcc
Q 007159 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~ 313 (615)
..+.+.+..++|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++++ +.+.+++.+++.|++.+.
T Consensus 254 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~ 331 (420)
T PRK09528 254 FATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPF 331 (420)
T ss_pred HhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHH
Confidence 334466777899999999999999999999999999999999999999998888888777 677788889999999888
Q ss_pred hhhHHHHHhhhcccccchhhHHHH-HHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcC
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYS 386 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 386 (615)
..+....++.+.+|++.++...+. ++....+|.+++|.+.|++.+.+||+..|++.+++.++..++.+...++
T Consensus 332 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 332 LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888888999999998888877655 5677889999999999999999999999998888777666555554443
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.41 E-value=1.5e-11 Score=130.54 Aligned_cols=154 Identities=12% Similarity=0.107 Sum_probs=122.8
Q ss_pred HHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 226 MSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 226 ~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
+....|. +.+++|++..+.+++.+...++.+++.++.|+++||+|+|+.+..+.+...+......+.+ +.+.+++.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 312 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 3344555 4567899999999998888888888999999999999999988877666555544444444 566677788
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHh
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 382 (615)
++.+++.+...+....+..+.+| +++++++++++....+|..+||.++|.+.+.+||+..|++.+++.++..+..+.
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 88888888777777888889886 569999999999999999999999999999999999998777666655544443
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.41 E-value=5.9e-12 Score=134.25 Aligned_cols=159 Identities=18% Similarity=0.194 Sum_probs=129.1
Q ss_pred HHHHhHHHHHhhcCCCch----hhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHH
Q 007159 225 NMSIAILPMSKEFNWNST----TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (615)
Q Consensus 225 ~~~~~~~~i~~~~g~s~~----~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~l 300 (615)
.+.+..+.+..+.+.+.. ..+++.++..++..++.++.|++.||+|||+.+..+.++..++.+...+.+ +.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHH
Confidence 344555555555433332 245666777888889999999999999999999999888877777666665 66778
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 380 (615)
++.+++.|++.+...+...+.+.+..+++++++.+++......+|..+||.++|.+.+..||++.|++.+++.++..++.
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999889999999999999999999999999999999999999999888777766655
Q ss_pred Hhhhc
Q 007159 381 LKKAY 385 (615)
Q Consensus 381 ~~~~~ 385 (615)
+...+
T Consensus 395 ~~~~~ 399 (408)
T PRK09874 395 WNSLR 399 (408)
T ss_pred HHHHH
Confidence 54433
No 130
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=1.8e-11 Score=129.87 Aligned_cols=153 Identities=20% Similarity=0.235 Sum_probs=128.8
Q ss_pred HHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
.....+.+.++.+.+. .++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHHH
Confidence 3445556666666653 56677778888899999999999999999999999988888887777766 6677788889
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHh
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 382 (615)
+.|++.+...+...+.+.+.+++++|++++|+++....+|..+||.+.+++.++.||++.|++.+++.++..++.+.
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999998888888899999999999999999999999999999999999999999999999888777666555443
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=1.4e-11 Score=131.35 Aligned_cols=155 Identities=14% Similarity=0.029 Sum_probs=126.1
Q ss_pred HHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 225 NMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 225 ~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
......|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+|+|+.+..+.+...++.++..+.+ +.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHH
Confidence 344456778888999999999999999999999999999999999999998887777666666665555 566677777
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHHHHHH
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~ 381 (615)
++.|++.+...+...+++.+.+|+++|++.+|+.+....+|..+||.++|.+.++.+ |...+++...+.++..++.+
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 888988888888999999999999999999999999999999999999999988754 55555555444444333333
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=2e-11 Score=129.09 Aligned_cols=156 Identities=11% Similarity=0.012 Sum_probs=135.3
Q ss_pred hhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHH
Q 007159 220 NMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF 299 (615)
Q Consensus 220 ~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ 299 (615)
......+....|.+.+++|.+..++|++.++..++.+++.++.+++.||+|.|+++.++.++..+..++.++++ +.+.
T Consensus 218 ~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~ 295 (382)
T TIGR00902 218 QGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--AFPL 295 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--hHHH
Confidence 34444455566777788999999999999999999999999999999999999999999999999999888887 7788
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHH-HHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 378 (615)
+++.+++.|+..+...+....++.+. |++++++..++++ ...++|.++|+.++|++.+++|+ ..|++.+++.++..+
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 88899999999999999999999998 8889999999986 46789999999999999999986 667777776665443
Q ss_pred H
Q 007159 379 L 379 (615)
Q Consensus 379 ~ 379 (615)
+
T Consensus 374 ~ 374 (382)
T TIGR00902 374 L 374 (382)
T ss_pred H
Confidence 3
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.9e-11 Score=126.83 Aligned_cols=163 Identities=23% Similarity=0.387 Sum_probs=143.0
Q ss_pred HHHhhhhhHHHHhHHHHHhhc-CCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCch-HHHHHHHHHHHHHHHHHhhhc
Q 007159 217 LLCNMDRVNMSIAILPMSKEF-NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-VLGFGVIWWSVATVLTPVAAR 294 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~~i~~~~-g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~-~l~~~~~l~~i~~~l~~~~~~ 294 (615)
+........+....|.+.++. |.+..+.+++.+...++..++.++.+++.||+|+|+ .+..+.++..++.++..+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 263 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP- 263 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-
Confidence 333444455556667666554 899999999999999999999999999999999999 99999999999998888777
Q ss_pred cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHH
Q 007159 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (615)
Q Consensus 295 ~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 374 (615)
+.+.+.+..++.|++.+...+...+++.+..|+++|++.+++......+|..+++.+.+.+.+..+|++.+++.+++.+
T Consensus 264 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 264 -SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred -cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHH
Q 007159 375 IWFALWL 381 (615)
Q Consensus 375 ~~~~~~~ 381 (615)
+..++..
T Consensus 343 i~~i~~~ 349 (352)
T cd06174 343 LAALLLL 349 (352)
T ss_pred HHHHHhe
Confidence 6665543
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.38 E-value=3.2e-11 Score=127.95 Aligned_cols=152 Identities=14% Similarity=0.079 Sum_probs=121.4
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH-HHhhhccChHHHHHHHHHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLPFLLIMRAFMG 308 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l-~~~~~~~~~~~ll~~r~l~G 308 (615)
.+.+.+++|.+..+.+++.++..++..++.++.|++.||+++|.++ .+..+..++..+ ....+ +.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 3445566899999999999999999999999999999999988654 444444444333 33344 5667778888999
Q ss_pred hhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhc
Q 007159 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 309 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
++.+...+.....+.+..| ++|++++|++.....+|..+||+++|.+.+++|++..|++.+++.++..++.....+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988777778888888875 688999999999999999999999999999999999999888777766665555443
No 135
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=2.6e-11 Score=131.81 Aligned_cols=169 Identities=12% Similarity=0.039 Sum_probs=122.7
Q ss_pred HHHHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 007159 213 FSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
++..++............|.+ .+++|++..+.++..+...++..++.+++|+++||+|+|+.+.....+..++..+..+
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~ 343 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY 343 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH
Confidence 333344444444455566765 5679999999999999999999999999999999999998776655444433322222
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHH-HHHHHhhhHhhhhc------------
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQ------------ 358 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~ig~~l~~~l~~------------ 358 (615)
....+.+.+.+.+++.|++.............|.+|+++++.+.|+.+....+ |.+++|.+.|++.+
T Consensus 344 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~ 423 (467)
T PRK09556 344 QHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYT 423 (467)
T ss_pred HhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccc
Confidence 22225555667778888654444444446677999999999999999998886 77999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHH
Q 007159 359 KFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 359 ~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
..||+..|++.+++.++..+..+
T Consensus 424 ~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 424 LTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccChHHHHHHHHHHHHHHHHHHH
Confidence 67899999887666665544443
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=1.2e-11 Score=132.49 Aligned_cols=158 Identities=14% Similarity=0.031 Sum_probs=133.2
Q ss_pred HHHhHHHHHhh-cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 226 MSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 226 ~~~~~~~i~~~-~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
+....|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +++.++++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHH
Confidence 34456766666 899999999999999999999999999999998888888888888888877776666 666677888
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhh
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 384 (615)
++.|++.+...+...+++.+..|++.|++++|++.....+|..+||.+.|++.+.+|++..+++.+++.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 88999988887888899999999999999999999999999999999999999999999888877776666555554443
Q ss_pred c
Q 007159 385 Y 385 (615)
Q Consensus 385 ~ 385 (615)
+
T Consensus 400 ~ 400 (417)
T PRK10489 400 G 400 (417)
T ss_pred c
Confidence 3
No 137
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=3.7e-11 Score=135.17 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhh
Q 007159 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 324 (615)
Q Consensus 245 g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~ 324 (615)
.+...+..++.+++.++.|+++||+|||++++++.++.+++.+++++.+ +...+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788999999999999999999999999999999998888877 56667888888899888889999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHh
Q 007159 325 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (615)
Q Consensus 325 ~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 382 (615)
++|.++|++++|+..+...+|.++||++++.+.+. +...+|++.+++.++.+++.++
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK 732 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988764 4556676666665554444443
No 138
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=6e-11 Score=129.77 Aligned_cols=162 Identities=14% Similarity=0.130 Sum_probs=117.8
Q ss_pred hhhhHHHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH-HHhhhccChH
Q 007159 221 MDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLP 298 (615)
Q Consensus 221 ~~~~~~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l-~~~~~~~~~~ 298 (615)
.....+...+|.+. +++|++..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. .......+..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34444455667655 567998888888888889999999999999999999999988877654433322 2222222466
Q ss_pred HHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-CchHHHHHHHHHHHHHH
Q 007159 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSIWF 377 (615)
Q Consensus 299 ~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~ 377 (615)
.+++.+++.|++.+...+....++.+.+|++.|+.++++......+++.++|.+.+++.+.. +|+..+++..+..++.+
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 67788888888877777788888999999999999999855556667788999999888754 46766665555444444
Q ss_pred HHHHh
Q 007159 378 ALWLK 382 (615)
Q Consensus 378 ~~~~~ 382 (615)
+..++
T Consensus 424 ~~~~~ 428 (490)
T PRK10642 424 ITGVT 428 (490)
T ss_pred HHHHH
Confidence 43333
No 139
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.36 E-value=8.6e-12 Score=131.73 Aligned_cols=158 Identities=12% Similarity=0.177 Sum_probs=120.5
Q ss_pred HHHHhhhhhHHHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHH--HHHHhh
Q 007159 216 FLLCNMDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT--VLTPVA 292 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~--~l~~~~ 292 (615)
.+.............|.+. +++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+..+.. ++..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444555666665 7789999999999999999999999999999999999998775554443332 222222
Q ss_pred hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHH-HHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHH
Q 007159 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFG 370 (615)
Q Consensus 293 ~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~ 370 (615)
...+.+.+++..++.|++.+...+...+++.|.+|+++|++++++. ..+..+|..++|.++|++.++.| |++.++...
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 2225566677788889998889999999999999999999999984 55667899999999999999888 888777655
Q ss_pred HHH
Q 007159 371 SLG 373 (615)
Q Consensus 371 ~~~ 373 (615)
+..
T Consensus 388 ~~~ 390 (394)
T TIGR00883 388 ALA 390 (394)
T ss_pred HHH
Confidence 443
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.36 E-value=4.7e-11 Score=125.66 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=123.5
Q ss_pred hHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHH
Q 007159 229 AILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFM 307 (615)
Q Consensus 229 ~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~ 307 (615)
..|. +.+++|.++.+.+++.+...+...++.++.|++.||+|+|+++.++.++..+..++..+.+ +.+.+++.+++.
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 298 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLN 298 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 3444 4577899999999998888888888899999999999999998888776666555555555 566677788899
Q ss_pred HhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHH
Q 007159 308 GIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 308 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
|++.+...+....++.+..| +++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..
T Consensus 299 g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99988888888889999886 46779999999999999999999999999999999999988777666555543
No 141
>PRK10054 putative transporter; Provisional
Probab=99.35 E-value=5.4e-11 Score=126.40 Aligned_cols=173 Identities=16% Similarity=0.110 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 503 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~ 503 (615)
+.++.+.+..++...+.+....++|.|+++.+|++..+.|+..+...++.+++.++.|+++||+++|+.+..+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~------ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI------ 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH------
Confidence 35677777888888888999999999999889999999999999999999999999999999999997544221
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHH-HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 504 IGFLGPAFFLTQLSHVRTPAMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 504 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
+...+........+..+..+.+. +.+.......+.......+..++++|+++.|+.+...++|..++|++++++.+
T Consensus 81 ---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 81 ---TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred ---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111223333333322 22222222222233334566678899999999999999999999999999876
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHH
Q 007159 583 RGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 583 ~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
.+|+..|.+.+++++++.++..+
T Consensus 158 -~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 158 -QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred -hccCcHHHHHHHHHHHHHHHHHH
Confidence 68999999888887776554433
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=5e-11 Score=126.05 Aligned_cols=152 Identities=16% Similarity=0.145 Sum_probs=126.0
Q ss_pred HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHH
Q 007159 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (615)
Q Consensus 227 ~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l 306 (615)
...+|.+.++.|.+..++|++.+...++.++++++.|++.||+|+|+++..+..+..++.+... . . .......++
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~l 294 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHHH
Confidence 3456777778899999999999999999999999999999999999999888887777665432 2 1 223456677
Q ss_pred HHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 307 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
.|++.....|...+.+.+..|+++++...+......++|.++||.++|++.+++||++.|++.+.+.++..+..++.
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 78877778899999999999888888888888888999999999999999999999999998888777666555554
No 143
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.34 E-value=1.7e-09 Score=111.77 Aligned_cols=336 Identities=11% Similarity=0.088 Sum_probs=219.6
Q ss_pred HHhHHHHHhh-cCCCchhhH-HHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 227 SIAILPMSKE-FNWNSTTVG-LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 227 ~~~~~~i~~~-~g~s~~~~g-~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
+...|.+.+. .|++..++. -+.-+..=.++...++...+.|..+.|++++++.+...+..+++.+.+ +...+-+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHH
Confidence 3345555554 899888875 566667777888889999999999999999999999988888888887 888899999
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC--CCchHHHHHHHHHHHHHHHHHHh
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGSIWFALWLK 382 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~ 382 (615)
++.|++.+. ..+..+++-...|+++..++.+...++.-+|..++.++|-.++.. ..++...++......+.+++.++
T Consensus 102 ~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 102 FFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999776 678888998889999999999999999999999999998887763 33444544433333333333333
Q ss_pred hhcCCCCC--Cccc---------cHHHHhhhhcCC----cc---ccc-------cccccHHHHhhhhhHHHHHHHHHHHH
Q 007159 383 KAYSSPKE--DPEL---------RAEEKRHILGGS----IS---KEA-------VSVIPWKLILSKAPVWALIISHFCHN 437 (615)
Q Consensus 383 ~~~~~~~~--~~~~---------~~~~~~~~~~~~----~~---~~~-------~~~~~~~~l~~~~~~~~~~l~~~~~~ 437 (615)
.+..++.. ++.. +.+...+..+.. .. ... .-.+.++...++|.++...+-..+..
T Consensus 181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 22211100 0000 000000000000 00 000 01234555667888888888888888
Q ss_pred HHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHH
Q 007159 438 WGTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 515 (615)
Q Consensus 438 ~~~~~~~~~~p~~~~~~--~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 515 (615)
.++..+.+|......+. -+-.....|.+-+...+.+.++.+..|++..++.+.. ...+....++.+.+++.
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~-------~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG-------ELALGVFSLLQAGLLFL 333 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH-------HHHHHHHHHHHHHHHHH
Confidence 88888888888887764 2334445688888888888889999998855544432 12333333344444555
Q ss_pred hccccchHHHHHHHHHHh-hhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHH
Q 007159 516 LSHVRTPAMAVLCMACSQ-GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 572 (615)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~i 572 (615)
+...+..+...+..++.. ............++.....+.-|.++|+++.+..+-..+
T Consensus 334 m~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 334 MSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 555666665555544444 444444445555777777888899999987766555544
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=3.1e-11 Score=132.27 Aligned_cols=150 Identities=12% Similarity=0.148 Sum_probs=117.2
Q ss_pred HHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 226 MSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 226 ~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
....+|.+. +++|++..+++++.+...++.+++.++.|+++||+|+|+++.++.++..+..++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445677766 5899999999999999999999999999999999999999888877666655444333322333344445
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
++.+.......+...+++.+.+|+++|++++++......+|..+||+++|.+.+.+||+..++..+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55444444445677788999999999999999999999999999999999999999999888665544333
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=7.8e-11 Score=124.20 Aligned_cols=165 Identities=15% Similarity=0.017 Sum_probs=115.8
Q ss_pred HHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCch--HHHHHHHHHH----HHHH
Q 007159 215 AFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP--VLGFGVIWWS----VATV 287 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~--~l~~~~~l~~----i~~~ 287 (615)
..++.......+....|.+ .+++|.+..+.+++.+...++..++.++.|++.||+++|+ .......... .+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 3344444444555566665 4668999999999999999999999999999999999986 1111111111 1111
Q ss_pred HHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHH
Q 007159 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVF 366 (615)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f 366 (615)
........+.+..+...++.+.+.+ ..+...+++.+.+|+++|++++++.+....+|..++|.+.+.+.+..| |++.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~ 381 (399)
T TIGR00893 303 MFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGAL 381 (399)
T ss_pred HHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHH
Confidence 1111111123333333344444444 789999999999999999999999999999999999999999999988 99999
Q ss_pred HHHHHHHHHHHHHH
Q 007159 367 YSFGSLGSIWFALW 380 (615)
Q Consensus 367 ~~~~~~~~~~~~~~ 380 (615)
++.+++.++..+..
T Consensus 382 ~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 382 MVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777766555443
No 146
>PRK03699 putative transporter; Provisional
Probab=99.31 E-value=9e-11 Score=124.70 Aligned_cols=157 Identities=13% Similarity=0.167 Sum_probs=125.9
Q ss_pred hhhhHHHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHH
Q 007159 221 MDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF 299 (615)
Q Consensus 221 ~~~~~~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ 299 (615)
.....+....|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+++.....+..+..++....+ +.+.
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~ 296 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSH 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchH
Confidence 33344455677765 67899999999999999999999999999999999999998887777766666555555 4555
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 379 (615)
+.+..++.|++.+..++...++..+..+ +++++..+.......+|..++|.+.|++.+..||+..+++.+++..+..+.
T Consensus 297 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 297 LLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 6667788898888888888888777764 556788888888899999999999999999999999998777766555443
Q ss_pred H
Q 007159 380 W 380 (615)
Q Consensus 380 ~ 380 (615)
+
T Consensus 376 ~ 376 (394)
T PRK03699 376 C 376 (394)
T ss_pred H
Confidence 3
No 147
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.31 E-value=4.7e-11 Score=129.52 Aligned_cols=179 Identities=13% Similarity=0.106 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~ 286 (615)
..+...++..+........+....|.+.+++|++..+.++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444444444445566788888999999888999999999999999999999999999999998888877777
Q ss_pred HHHHh---hhcc------ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhh
Q 007159 287 VLTPV---AARI------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (615)
Q Consensus 287 ~l~~~---~~~~------~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~ 357 (615)
++..+ .... +...+....++.+.......+....++.|.+|+++|++++++......+|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66552 1111 12222223333333223334666777899999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHhhhc
Q 007159 358 QKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 358 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
++.+|++.|++.+++.++..++.+...+
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecc
Confidence 9899999999888877766666554444
No 148
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=7.6e-11 Score=127.66 Aligned_cols=163 Identities=13% Similarity=0.050 Sum_probs=111.2
Q ss_pred hhhHHHHhHHHHHh-hcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc--CCchHH-HHHHHHHHHHHHHHHhhhccCh
Q 007159 222 DRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVL-GFGVIWWSVATVLTPVAARIGL 297 (615)
Q Consensus 222 ~~~~~~~~~~~i~~-~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~--Grk~~l-~~~~~l~~i~~~l~~~~~~~~~ 297 (615)
........+|.+.+ ++|++..+.+++..++.++..++.++.|+++||+ +||+.. +....+..++.++..+....+.
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~ 347 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNP 347 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccCh
Confidence 33445556777655 4789999999999999999999999999999999 555432 2222333333333323222234
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHH-HHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q 007159 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSV-TGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (615)
Q Consensus 298 ~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~-ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 376 (615)
+..++..++.|.+..........+..+.+|+++|++++|+.+....+|.. +||.+.|.+.+++||+..|++.++++++.
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~ 427 (452)
T PRK11273 348 TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA 427 (452)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33444455555543333334445677999999999999999988888765 47999999999999999998877766655
Q ss_pred HHHHHhhh
Q 007159 377 FALWLKKA 384 (615)
Q Consensus 377 ~~~~~~~~ 384 (615)
++......
T Consensus 428 ~~~~~~~~ 435 (452)
T PRK11273 428 VILLIVVM 435 (452)
T ss_pred HHHHHHHh
Confidence 55444333
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.30 E-value=2.9e-11 Score=130.89 Aligned_cols=156 Identities=15% Similarity=0.159 Sum_probs=124.5
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc--CCchHHHH--HHHHHHHHHHHHHhhhccC
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVLGF--GVIWWSVATVLTPVAARIG 296 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~--Grk~~l~~--~~~l~~i~~~l~~~~~~~~ 296 (615)
.........++.+.+++|++..+.+++.++..++.+++.++.|++.||. ++|+...+ +.++.+++.+++.+.+ +
T Consensus 255 ~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~ 332 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--D 332 (455)
T ss_pred HHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--h
Confidence 3333444566777788999999999999999999999999999999984 33433333 3333344444555555 6
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC-CchHHHHHHHHHHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSI 375 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~ 375 (615)
++.+++.+++.|++.+...+...+++.+.+|++++++.+++++....+|.++||.++|.+.+.. +|++.|++.+++.++
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li 412 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHH
Confidence 7778889999999999999999999999999999999999999999999999999999999887 499999887776655
Q ss_pred HHH
Q 007159 376 WFA 378 (615)
Q Consensus 376 ~~~ 378 (615)
..+
T Consensus 413 ~~~ 415 (455)
T TIGR00892 413 AGL 415 (455)
T ss_pred HHH
Confidence 444
No 150
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.29 E-value=1.5e-10 Score=124.69 Aligned_cols=164 Identities=13% Similarity=-0.000 Sum_probs=112.2
Q ss_pred hhhhHHHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc--CCchHH-HHHHHHHHHHHHHHHhhhccC
Q 007159 221 MDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVL-GFGVIWWSVATVLTPVAARIG 296 (615)
Q Consensus 221 ~~~~~~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~--Grk~~l-~~~~~l~~i~~~l~~~~~~~~ 296 (615)
.....+....|.+. +++|++..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+...+.......+
T Consensus 257 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK11663 257 VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFAS 336 (434)
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccccc
Confidence 33344445566655 67899999999999999999999999999999998 333322 222211121111111112113
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 376 (615)
...+.+..+..|++...........+.+.+|+++|++++|+.+....+|.+++|.+.|++.+.+||+..|++.+++.++.
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~ 416 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGIS 416 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHH
Confidence 33333444444544332233344567888989999999999999999999999999999999999999999888887776
Q ss_pred HHHHHhhh
Q 007159 377 FALWLKKA 384 (615)
Q Consensus 377 ~~~~~~~~ 384 (615)
.+..+...
T Consensus 417 ~~~~~~~~ 424 (434)
T PRK11663 417 ALLLLPFL 424 (434)
T ss_pred HHHHHHHH
Confidence 66555443
No 151
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.28 E-value=3.2e-10 Score=120.39 Aligned_cols=163 Identities=13% Similarity=0.008 Sum_probs=124.9
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHH
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~l 300 (615)
..........|.+.+++|.+..+.|...+++.++.+++.++.|++.||+|+|+.+..+..+..++.++....+. +...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~ 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHHH
Confidence 34444555667777778999999999999999999999999999999999999998888777777665543331 22222
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFA 378 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~ 378 (615)
.-++.|++.+...+.......+..+ ++++++.+++.+....++..+||.+.|++.+..| |...|++.++..++..+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2345688888888887777777775 5788999999999999999999999999999876 77777776666665555
Q ss_pred HHHhhhcC
Q 007159 379 LWLKKAYS 386 (615)
Q Consensus 379 ~~~~~~~~ 386 (615)
......++
T Consensus 376 ~~~~~~~~ 383 (393)
T PRK09705 376 ITLRFAPA 383 (393)
T ss_pred HHHHhccc
Confidence 54444443
No 152
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=8.3e-11 Score=119.58 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc--CCch-HHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKP-VLGFGVIWWS 283 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~--Grk~-~l~~~~~l~~ 283 (615)
.+..++++.++.+..+..+.--.|. +.|..|+|...+++..++|-++.+.+.+++|+++||+ |||. +-++.+++..
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 4556666777777888887777666 5677899999999999999999999999999999995 5654 4445555566
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHH-HHHHHhhhHhhhhcCCCc
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~ig~~l~~~l~~~~gw 362 (615)
++.+...++++.++++..++.++.|+..-...........|..|++-.|.+.|+.....++ |.+.+....+++.+.+||
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW 412 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGW 412 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCC
Confidence 6666666777656788889999999988888777888889999999999999999999998 999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhc
Q 007159 363 PSVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 363 ~~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
...|+++.+.+++..++++....
T Consensus 413 ~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 413 DGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHHh
Confidence 99998877776666555554443
No 153
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.26 E-value=2.9e-10 Score=122.28 Aligned_cols=178 Identities=15% Similarity=0.188 Sum_probs=122.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccccHHHHHHHH
Q 007159 423 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIM 501 (615)
Q Consensus 423 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~-g~~~~~~~~~~~~~ 501 (615)
.+.++.++...+...+.++++..++|.|+++.+|++..+++.+...+.....++.+++|+++||+ |+|+.+..+. .+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~--il 85 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGA--LL 85 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHH--HH
Confidence 34566777777778888999999999999998999999999999999999999999999999999 9986544322 11
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc--hhhHHHHHHHHHHHHHHHHHHHHhhh
Q 007159 502 QSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR--YAGVLLGLSNTAGVLAGVFGTAATGY 579 (615)
Q Consensus 502 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~gl~~~~~~lg~~igp~l~G~ 579 (615)
..++. .++...........+.......+.+...+.......+..+++ +|+++.++.+...++|+.++|.+.|+
T Consensus 86 ~~lg~-----lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 86 MAIGH-----VVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHH-----HHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111111111222111222222222222223344455553 68999999999999999999999999
Q ss_pred eeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 580 ILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 580 l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+.+..||+..|.++++..+++.+.+...
T Consensus 161 L~~~~Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887776666665443
No 154
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=4.1e-10 Score=115.88 Aligned_cols=179 Identities=16% Similarity=0.192 Sum_probs=143.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
|++.+........+........+++.-|.+.+..|++...++++.-+|.++..++..+.|++.|| +.|+.+.....+.+
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a 287 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLA 287 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHH
Confidence 33444444444445555555666777888889999999999999999999999999999999999 99999998888888
Q ss_pred HHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
+..+.+.+..+ +.+..++.-++.|++...........+++ ..++.+..+.+++....++|..+|..++|.+.+++|+.
T Consensus 288 ~~~l~l~~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~ 365 (394)
T COG2814 288 LALLALTFTGA-SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYA 365 (394)
T ss_pred HHHHHHHHhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 88777766653 35566667777888877777777777777 34789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q 007159 364 SVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 364 ~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
...++.+++.++...+.+...+
T Consensus 366 ~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 366 ATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888887776666555443
No 155
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.25 E-value=4.2e-10 Score=119.78 Aligned_cols=171 Identities=18% Similarity=0.252 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHH
Q 007159 427 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 506 (615)
Q Consensus 427 ~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~ 506 (615)
+.+....++...+.+....++|.|+++.+|++..+.|+..+...+...+..++.|+++||+++|+.+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~--------- 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGM--------- 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHH---------
Confidence 45556777778888888999999998889999999999999999999999999999999999986544322
Q ss_pred HHHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC
Q 007159 507 LGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 585 (615)
Q Consensus 507 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g 585 (615)
+..+.........+.++ +.+..++.+.+.....+.......+..++++++++.|+.+....+|..+||.++|++. ..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 11111111111223333 3333333333332333333344556677899999999999999999999999999998 679
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 007159 586 WDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 586 ~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
|+..|++.++++++..++..+.
T Consensus 163 ~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998887777665544433
No 156
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.25 E-value=4.8e-10 Score=119.45 Aligned_cols=162 Identities=16% Similarity=0.205 Sum_probs=122.2
Q ss_pred HhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHH-HHHHHHHHHHHHHHhhh---c
Q 007159 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAA---R 294 (615)
Q Consensus 219 ~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~-~~~~l~~i~~~l~~~~~---~ 294 (615)
.......+....|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.+.+ .
T Consensus 234 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~ 313 (402)
T TIGR00897 234 NTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFG 313 (402)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3344444556678888889999999999999999999999999999999999888764 33333333333322211 1
Q ss_pred cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHH
Q 007159 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (615)
Q Consensus 295 ~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 374 (615)
.+.+.+++..++.|++.+...+ ....+.+.. +++|++++|+.+....+|..++|.+++.+.+.+||...|++.+++.+
T Consensus 314 ~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~ 391 (402)
T TIGR00897 314 HSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYV 391 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Confidence 2455667778888988877644 455666765 56899999999999999999999999999999999999998887776
Q ss_pred HHHHHHHh
Q 007159 375 IWFALWLK 382 (615)
Q Consensus 375 ~~~~~~~~ 382 (615)
+..++..+
T Consensus 392 i~~~~~~~ 399 (402)
T TIGR00897 392 VSAFLTAF 399 (402)
T ss_pred HHHHHHHH
Confidence 65555443
No 157
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.24 E-value=2.3e-08 Score=105.43 Aligned_cols=363 Identities=10% Similarity=0.006 Sum_probs=203.8
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhc-CCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEF-NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~-g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l 288 (615)
..+....++...+.-++..+.+.+..+. .-+..-.+...-.-.+..+++.+..|.+.||..|.+++..+.++--++..+
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 3445566667777777777777766665 334444555555666777888899999999999999887776554333322
Q ss_pred HH------hhhcc-----Ch--HHHHHHHHHHHhhhcchhhHH-HHHhhhcc------cccchhhHHHHHHHHHHHHHHH
Q 007159 289 TP------VAARI-----GL--PFLLIMRAFMGIGEGVAMPAM-NNMLSKWI------PVSERSRSLAFVYSGMYLGSVT 348 (615)
Q Consensus 289 ~~------~~~~~-----~~--~~ll~~r~l~G~~~~~~~~~~-~~~i~~~~------~~~~r~~~~~~~~~~~~lG~~i 348 (615)
.+ +.... +. ..+++.-.+.|........+. .++=-||. +++.+.+.++...-.--+.-++
T Consensus 85 s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckll 164 (432)
T PF06963_consen 85 SCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLL 164 (432)
T ss_pred HHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHH
Confidence 11 11110 11 112222222222222221111 11122332 3455677788888888899999
Q ss_pred HhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh-------hcCCCCCCccccHHHHhhhh-cCCccc-----------
Q 007159 349 GLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK-------AYSSPKEDPELRAEEKRHIL-GGSISK----------- 409 (615)
Q Consensus 349 g~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~----------- 409 (615)
+|++.|.+....+.....++.++..++...+=+.. .|.-..+++....+...... ......
T Consensus 165 aPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (432)
T PF06963_consen 165 APLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNP 244 (432)
T ss_pred HHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHH
Confidence 99999999998888877776666655544332111 11111110000000000000 000000
Q ss_pred cccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007159 410 EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS 489 (615)
Q Consensus 410 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~ 489 (615)
-......|+..++++.+...+ ...+.++....+-..+..|+... |+++...|.+-+...+.++.+.++.+++.+|+|.
T Consensus 245 ~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl 322 (432)
T PF06963_consen 245 LRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL 322 (432)
T ss_pred HHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 001123566666666544444 33344444555666778888885 9999999999999999999999999999999997
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhcccc--ch--HHHHHHHHHH-hhhhhhhhhhhhhhhhccCcchhhHHHHHHHH
Q 007159 490 KGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TP--AMAVLCMACS-QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT 564 (615)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~ 564 (615)
.|.-..+. ... ..++..+...+.....+ .. ..++....+. .+..++-........+.+++++||+..|+.+.
T Consensus 323 vr~G~~~l--~~q-~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~s 399 (432)
T PF06963_consen 323 VRAGLWSL--WWQ-WVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNS 399 (432)
T ss_pred hhhHHHHH--HHH-HHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHH
Confidence 76544332 111 11222222222222211 11 1112222222 22333333444456667888999999999999
Q ss_pred HHHHHHHHHHHHh
Q 007159 565 AGVLAGVFGTAAT 577 (615)
Q Consensus 565 ~~~lg~~igp~l~ 577 (615)
..++...+.-.+.
T Consensus 400 l~~lf~ll~~~~~ 412 (432)
T PF06963_consen 400 LQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 9998888766554
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.23 E-value=3.8e-10 Score=117.30 Aligned_cols=167 Identities=17% Similarity=0.317 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHH
Q 007159 430 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGP 509 (615)
Q Consensus 430 ~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 509 (615)
++..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+. .+...
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~-------~~~~~ 74 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGL-------LLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHH-------HHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehh-------hhhhh
Confidence 34455666666677777786777779999999999999999999999999999999999997443221 11111
Q ss_pred HHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHH
Q 007159 510 AFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDV 589 (615)
Q Consensus 510 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~ 589 (615)
...+..+. .+.+.+.+..++.+.+.....+.......+..++++|+++.++.+....+|..++|.+++++.+..+|+..
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~ 153 (352)
T PF07690_consen 75 GSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWA 153 (352)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCH
T ss_pred HHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccc
Confidence 11111111 34443444444444444445555555566677778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 007159 590 FKVAVVLYIIGTLVW 604 (615)
Q Consensus 590 f~~~~~~~l~~~l~~ 604 (615)
|++.+++.++..++.
T Consensus 154 ~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 154 FLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhH
Confidence 999999998887753
No 159
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.23 E-value=1.7e-09 Score=118.14 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=117.6
Q ss_pred HHHHHhhcCCCchhhHHHHH-HHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH---HhhhccChHHHHHHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQS-SFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIMRA 305 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s-~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~---~~~~~~~~~~ll~~r~ 305 (615)
.|.+.+++|++..+++++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..++. +... .+.+.+.+..+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHH
Confidence 44456779999999999974 6668999999999999999999888777666555544322 2221 24444455566
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
+..++.+...+...++..+..+++.+++.+++.+....+|..+++.+.|++.+.+||+..|.+.+++.++..++....
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666677788888999888899999999999999999999999999999999999988777776665555444
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.23 E-value=9.9e-11 Score=124.36 Aligned_cols=139 Identities=16% Similarity=0.186 Sum_probs=113.5
Q ss_pred HhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH-HHhhhccChHHHHHHHH
Q 007159 228 IAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLPFLLIMRA 305 (615)
Q Consensus 228 ~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l-~~~~~~~~~~~ll~~r~ 305 (615)
...|. +.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.++..+..+. ..... +.+.+.+..+
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 336 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLGLF 336 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHHHH
Confidence 34444 45678999999999999999999999999999999999999988887765433332 22222 4555666667
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHH
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYS 368 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~ 368 (615)
+.|++.+...+...+++.+.+|+++|++++|+.+....+|..+||+++|++.++.| |+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77777777778888999999999999999999999999999999999999999988 8776654
No 161
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.23 E-value=4.3e-10 Score=120.74 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=107.9
Q ss_pred HHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
+...+|.+.++.|.+..+.+.+.++..++..++.++.|++.||+|||+.+..+.++..+..++....+..+...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777777899999999999999999999999999999999999999888877766655444333222222222222
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHH
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~ 368 (615)
..+++.....+....++.|.+|+++|++++|+......+|..+||.+.+++.+.+|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 222333333456667889999999999999999999999999999999999998887654433
No 162
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.23 E-value=4e-10 Score=122.53 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKI 500 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~--~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr-~g~~~~~~~~~~~~ 500 (615)
+.++.+.+..++..+++++...++|.|+++. +|++..+++.+.+...++..++.+++|+++|| +|+|+.+..+.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~--- 86 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG--- 86 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH---
Confidence 3566777777887889999999999999887 89999999999999999999999999999999 79996544221
Q ss_pred HHHHHHHHHHHHHHHhccccch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcc---hhhHHHHHHHHHHHHHHHHHHHH
Q 007159 501 MQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPR---YAGVLLGLSNTAGVLAGVFGTAA 576 (615)
Q Consensus 501 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~gl~~~~~~lg~~igp~l 576 (615)
++.++....+...... .+.+...+.+.+.+...+.......+..+++ .|+++.++.+...++|..+||++
T Consensus 87 ------~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l 160 (475)
T TIGR00924 87 ------IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL 160 (475)
T ss_pred ------HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH
Confidence 1111111111122222 2333333333333333333333344444443 48889999999999999999999
Q ss_pred hhheeccCChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 577 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 577 ~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
+|++.+..||+..|.+.++.++++.+.+...+
T Consensus 161 ~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 161 AGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999988999999998877776665554433
No 163
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.22 E-value=6.2e-10 Score=117.76 Aligned_cols=146 Identities=17% Similarity=0.092 Sum_probs=122.3
Q ss_pred HHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
+....|.+.++.|.+..++|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++.++.+ +.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Confidence 34445666678999999999999999999999999999999999999999999999888887777776 7777888999
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHH-HHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+.|++.+...+....++.+. +++++++..++.. ....+|..+||.++|.+.+.+|+ ..|+..+++.++
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 99999999999999998887 5667788888876 55678889999999999999887 466666555543
No 164
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.21 E-value=8.6e-10 Score=120.65 Aligned_cols=178 Identities=14% Similarity=0.170 Sum_probs=118.4
Q ss_pred hhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccHHHHH
Q 007159 421 LSKA-PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVR 498 (615)
Q Consensus 421 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr-~g~~~~~~~~~~ 498 (615)
+++| .++.+++..++..++++.+..++|.|+++.+|++..+.+..............+++|++.|| +|+|+.+..+.
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~- 95 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA- 95 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH-
Confidence 3455 58888888888889999999999999999999999998887777665655666789999999 59986544322
Q ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc--hhhHHHHHHHHHHHHHHHHHHHH
Q 007159 499 KIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR--YAGVLLGLSNTAGVLAGVFGTAA 576 (615)
Q Consensus 499 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~gl~~~~~~lg~~igp~l 576 (615)
.....+..+..+.......+.+...+.+.+.+...+.......+..+++ +++.+.++.+...++|..+||.+
T Consensus 96 ------~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 96 ------IVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred ------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 1111111111111111122222223333333333333333444444443 35567888899999999999999
Q ss_pred hhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 577 TGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 577 ~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
.|++.+..||+..|.+.++..+++.+.+.
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876666554443
No 165
>PRK10504 putative transporter; Provisional
Probab=99.21 E-value=1.1e-09 Score=119.27 Aligned_cols=176 Identities=18% Similarity=0.292 Sum_probs=126.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 503 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~ 503 (615)
+.+|.+.+..++.......+..++|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|+|+....+. ....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~--~~~~ 86 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI--VLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH--HHHH
Confidence 356777777777777777888899999877 8999999999999999999999999999999999997544221 1111
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 504 IGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 504 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
++ ...... ..+...+.+..++.+.+.....+.......+..++++++++.|+.+....+|..++|.++|.+.+.
T Consensus 87 ~~-----~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 87 LG-----SLFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HH-----HHHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 11 111111 122223333334444444444444444455667788999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
.||+..|.+...+.+++.++.....
T Consensus 161 ~gw~~~f~~~~~~~~l~~~~~~~~~ 185 (471)
T PRK10504 161 ASWHWIFLINIPVGIIGAIATLMLM 185 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999998877776666555443
No 166
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.20 E-value=9.5e-10 Score=119.98 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=121.9
Q ss_pred hhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccC--hHHH
Q 007159 223 RVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG--LPFL 300 (615)
Q Consensus 223 ~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~--~~~l 300 (615)
........|.+.++.|.+....++......+..+++.++.|+++||+|||++++.+.++.+++.++++.....+ ....
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33444566888888999887778888888888999999999999999999999999999888877765432111 1123
Q ss_pred HHHHHHHHhhhcc-hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhh------hcCCCchHHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGV-AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL------IQKFGWPSVFYSFGSLG 373 (615)
Q Consensus 301 l~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------~~~~gw~~~f~~~~~~~ 373 (615)
+.+.++.+++.+. ..+....+++|.+|+++|++++|+......+|.++++.+.+.+ .+.++|++.|++.+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 3344444554443 3367789999999999999999999999999988886665544 45788999998888776
Q ss_pred HHHHHHHHhhhcC
Q 007159 374 SIWFALWLKKAYS 386 (615)
Q Consensus 374 ~~~~~~~~~~~~~ 386 (615)
++..++.+...++
T Consensus 447 ~~~~~~~~~~~~e 459 (479)
T PRK10077 447 VLAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHHhcccc
Confidence 6666555544443
No 167
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.19 E-value=9.5e-10 Score=119.74 Aligned_cols=178 Identities=13% Similarity=0.181 Sum_probs=125.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccHHHHHHHH
Q 007159 423 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKIM 501 (615)
Q Consensus 423 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr-~g~~~~~~~~~~~~~ 501 (615)
.+.++.++...+...+++++...+++.|+++.+|++..+.+++...+.....+..+++|+++|| +|+|+.+..+. .+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~--~~ 90 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA--IV 90 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH--HH
Confidence 3457777778888889999999999999999999999999998888888888888899999999 99997655432 11
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc--hhhHHHHHHHHHHHHHHHHHHHHhhh
Q 007159 502 QSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR--YAGVLLGLSNTAGVLAGVFGTAATGY 579 (615)
Q Consensus 502 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~gl~~~~~~lg~~igp~l~G~ 579 (615)
..++.+. ..+.......+.+.....+.+.+...+.......+.++++ +|+.+.++.+...++|..+||.++|+
T Consensus 91 ~~~g~~~-----~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~ 165 (489)
T PRK10207 91 LAIGYFM-----TGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV 165 (489)
T ss_pred HHHHHHH-----HHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1111111111222333333333334444444555666665 45788999999999999999999999
Q ss_pred eeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 580 ILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 580 l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+.+..||+..|++.++..+++.+.+...
T Consensus 166 l~~~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 166 IADKFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999998766555555444443
No 168
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.19 E-value=6.9e-10 Score=115.93 Aligned_cols=175 Identities=16% Similarity=0.054 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHH
Q 007159 428 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 507 (615)
Q Consensus 428 ~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 507 (615)
.+....++...+.......+|.|..+ .+.+..+.+++.+...++..++.++.|++.||+|+|+.+.... ....++..
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~--~~~~~~~~ 79 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGAD--LIRAVLVA 79 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHH--HHHHHHHH
Confidence 34555666667777777888888877 6999999999999999999999999999999999997554321 11111111
Q ss_pred HHHHHHHHhccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 508 GPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 508 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
... ..........+.. +..++.+.+.....+.......+..++++|+++.|+.+....+|..++|.+++++.+..||
T Consensus 80 ~~~--~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 157 (365)
T TIGR00900 80 VLP--FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI 157 (365)
T ss_pred HHH--HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 111 1111111133333 3333333333333333344455667779999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 007159 587 DDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+..|++.++..+++.++....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999988887776665554443
No 169
>PRK09952 shikimate transporter; Provisional
Probab=99.19 E-value=1e-09 Score=118.21 Aligned_cols=156 Identities=16% Similarity=0.060 Sum_probs=111.6
Q ss_pred HHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh--hccChHHHHH
Q 007159 226 MSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA--ARIGLPFLLI 302 (615)
Q Consensus 226 ~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~--~~~~~~~ll~ 302 (615)
.....|. +.+++|.+......+..+..+...++.++.|+++||+|||+++..+.++..++.+.+... .....+.+++
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 3334444 456788888766666666677778889999999999999999888876665544333221 1112334445
Q ss_pred HHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHH-HHHHHHHHHhhhHhhhhcCC--CchHHHHHHHHHHHHHHHH
Q 007159 303 MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFAL 379 (615)
Q Consensus 303 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lG~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~ 379 (615)
..++.|++.+...+...+++.|.+|.+.|+.+.++... +..+|..++|.+.+++.+.. +|...+...+++.++..+.
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 56677888888888889999999999999888888554 44589999999999998744 4788777666665555444
Q ss_pred HH
Q 007159 380 WL 381 (615)
Q Consensus 380 ~~ 381 (615)
.+
T Consensus 429 ~~ 430 (438)
T PRK09952 429 AL 430 (438)
T ss_pred HH
Confidence 43
No 170
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.18 E-value=1.4e-09 Score=117.26 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHH-HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCc--hHHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNM-SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK--PVLGFGVIWW 282 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk--~~l~~~~~l~ 282 (615)
.+.+...++++++..-+...+ ......-.+++|++..+...+.-+..+..+++++++|++.||+|.| ++++++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 344445555555444333333 3344445669999999999999999999999999999999999999 8888888777
Q ss_pred HHHHHHHHh--------hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 283 SVATVLTPV--------AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 283 ~i~~~l~~~--------~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
.+..+...+ .. +.+.+.+..++.|+..|...+...++.+++.|+++.+..+|++....-....+||++.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 554443333 22 45678888899999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCC-chHHHHHHHHHHHHHHHHHHhh
Q 007159 355 ILIQKFG-WPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 355 ~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 383 (615)
.+.+..| -|+.++.+.++.++.++++...
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 9999877 7888887777766666655444
No 171
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.17 E-value=1.4e-09 Score=114.77 Aligned_cols=169 Identities=15% Similarity=0.036 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHH
Q 007159 430 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGP 509 (615)
Q Consensus 430 ~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 509 (615)
....+............+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+++|+.+..+. +..
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~---------~~~ 80 (385)
T TIGR00710 11 GCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGL---------FIF 80 (385)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH---------HHH
Confidence 333334444455555566766555 8999999999999999999999999999999999986544221 111
Q ss_pred HHHHHHhccccchHHHH-HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhH
Q 007159 510 AFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDD 588 (615)
Q Consensus 510 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~ 588 (615)
.+........+..+..+ ..++.+.+.....+.......+..++++|+++.|+.+....+|..++|.+++++.+..+|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 160 (385)
T TIGR00710 81 ALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHA 160 (385)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 11111111223333333 33344434333444444445566777999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 007159 589 VFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 589 ~f~~~~~~~l~~~l~~~~~~ 608 (615)
.|++.+++.++..++..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 161 IFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99988887777666555443
No 172
>TIGR00895 2A0115 benzoate transport.
Probab=99.17 E-value=4.6e-10 Score=118.78 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=111.3
Q ss_pred HHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhc
Q 007159 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR 294 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~ 294 (615)
..++............|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+....+......++.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 336 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF- 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh-
Confidence 3333334444455567788889999999999999999999999999999999999999554444333333333322233
Q ss_pred cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 295 ~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
+.+.+++..++.|++.+...+...+++.+.+|+++|++++|+......+|..+||.++|++
T Consensus 337 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 -SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 5666778888999999999999999999999999999999999999999999999999875
No 173
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.17 E-value=2.5e-09 Score=117.18 Aligned_cols=173 Identities=15% Similarity=0.120 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHH
Q 007159 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 505 (615)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~ 505 (615)
+..+++..++...-...+.+.+|.+..+ +|.+..+.+++.+.+.++..++.++.|+++||+|+|+.+..+. ....++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~--~~~~~~ 84 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG--TLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH--HHHHHH
Confidence 3445555566555566777788888766 8999999999999999999999999999999999997554322 111111
Q ss_pred HHHHHHHHHHhccccchHHHHH-HHHHHhhhhhhhhhhhhhhhhcc-CcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 506 FLGPAFFLTQLSHVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDI-GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 506 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
. ......++.+.+++ -.+.+.+.....+.......+.. ++++|+++.|+......+|..+||.++|++.+.
T Consensus 85 ~-------~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 85 S-------LAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred H-------HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1 11112234443333 34444444444443334444554 568999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
.||++.|++...++++..++..+..
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999998877777665554443
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=7.4e-10 Score=120.61 Aligned_cols=154 Identities=14% Similarity=0.168 Sum_probs=135.7
Q ss_pred HHHhHHHHH-hhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 226 MSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 226 ~~~~~~~i~-~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
+...+|.+. +.+|.++..+|++.+.+.+|.+++.++.+++.+|+++++++..+.++++++.+..++.+ +.+..++..
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHHH
Confidence 334567664 57899999999999999999999999999999999999999999999999988888887 777888888
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHH
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
++.|++.........+.+....|++.||+.++++......+..+|.++.|.+.+.+|.+.++.+.++..++..++..
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998877765555444443
No 175
>PRK15075 citrate-proton symporter; Provisional
Probab=99.16 E-value=1.6e-09 Score=116.66 Aligned_cols=145 Identities=17% Similarity=0.150 Sum_probs=104.4
Q ss_pred HhhhhhHHHHhHHHHHhh-cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH-HH-Hhhhcc
Q 007159 219 CNMDRVNMSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV-LT-PVAARI 295 (615)
Q Consensus 219 ~~~~~~~~~~~~~~i~~~-~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~-l~-~~~~~~ 295 (615)
............|.+.++ +|++..+.++....+.++..++.+++|+++||+|||++++.+.++..+..+ .. ......
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333444455567776554 799999999999999999999999999999999999988776554433221 11 111222
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHH-HHHHHHHHHhhhHhhhhcCCCch
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
++..+.+..++.|++.+...+....++.|.+|+++|+.++++... +..++..++|.+.+++.++.|+.
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 333344445566777777777777889999999999999998654 44456778999999999988864
No 176
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.16 E-value=2e-09 Score=113.07 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
...+...+|.+.++ +|++..+.|++.+.+.++..++.+..|++.||+|||+.... .+........ ......
T Consensus 7 ~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~-------~~~~~~~~~~-~~~~~~ 77 (368)
T TIGR00903 7 WVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFG-------SLATFAAAAG-RLLDPF 77 (368)
T ss_pred HHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH-------HHHHHHHHHH-HHHHhc
Confidence 34445566666655 89999999999999999999999999999999997753221 1111111111 111112
Q ss_pred cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 520 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
+...+.+.-++.+.+. +...+......+..++++|+++.++.+....+|..+++++++++.+..||+..|.+.+++.++
T Consensus 78 ~~~~l~~~R~l~G~g~-~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 78 NYEWLLACQLLAALGQ-PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAA 156 (368)
T ss_pred cHHHHHHHHHHHHhHh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 2233333333443333 334444444567788899999999999999999999999999999999999999998888777
Q ss_pred HHHHHHHHhc
Q 007159 600 GTLVWNLFAT 609 (615)
Q Consensus 600 ~~l~~~~~~~ 609 (615)
..+++.+..+
T Consensus 157 ~~~~~~~~lp 166 (368)
T TIGR00903 157 GIILVLAALP 166 (368)
T ss_pred HHHHHHHHcC
Confidence 6665554433
No 177
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.15 E-value=1.1e-09 Score=116.42 Aligned_cols=141 Identities=9% Similarity=0.073 Sum_probs=117.3
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhH
Q 007159 238 NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPA 317 (615)
Q Consensus 238 g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~ 317 (615)
+.+....|++.++..+...++.++.|++.||+|+|+.+.++.++.++..++...++ +.+.+++.+++.|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999998888877766666 6777788899999987776666
Q ss_pred HHHHhhhcccccchhhHHHH-HHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHH
Q 007159 318 MNNMLSKWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 318 ~~~~i~~~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 380 (615)
...+..+..+++.++...+. .+....+|.++++.++|++.+.+||+..|++.+++.++..++.
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 66777777777777776665 5678899999999999999999999999998888776655443
No 178
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=3.3e-09 Score=113.37 Aligned_cols=158 Identities=13% Similarity=0.039 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
...+....| .+++.+|++..+.|++.+...++..++.++.|++.||+|+|+.+..+ +++..+........
T Consensus 24 ~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~---------~~~~~~~~~~~~~~ 93 (412)
T TIGR02332 24 RINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGI---------MVLWGIASTATMFA 93 (412)
T ss_pred hhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHH---------HHHHHHHHHHHHHh
Confidence 334444445 66777999999999999999999999999999999999999754322 11111111111122
Q ss_pred cch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec------cCChhHHHHH
Q 007159 520 RTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ------RGSWDDVFKV 592 (615)
Q Consensus 520 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~------~~g~~~~f~~ 592 (615)
++. .+.+.-++.+.+.....+.......+..++++|+++.|+.+....+|..+++.+++++.+ ..||+.+|.+
T Consensus 94 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~ 173 (412)
T TIGR02332 94 TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLL 173 (412)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHH
Confidence 333 333444444444444444444445666778899999999999999999999999998864 3699999999
Q ss_pred HHHHHHHHHHHHHHH
Q 007159 593 AVVLYIIGTLVWNLF 607 (615)
Q Consensus 593 ~~~~~l~~~l~~~~~ 607 (615)
.++..++..++..++
T Consensus 174 ~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 174 EGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHhhc
Confidence 887776655544443
No 179
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.14 E-value=2.6e-09 Score=112.99 Aligned_cols=173 Identities=14% Similarity=0.084 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 503 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~ 503 (615)
+.++.+.+..++...........+|.+.++ +|++..+.++..+...++..++.++.|++.||+++|+.+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~------ 75 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLV------ 75 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHH------
Confidence 356667777777777777777888887655 8999999999999999999999999999999999986544221
Q ss_pred HHHHHHHHHHHHhccccchHHHH-HHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 504 IGFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 504 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
...++........+.++.++ ..++.+.+.....+.......+..++++++++.++......++..++|++++++.+
T Consensus 76 ---~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 76 ---ALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred ---HHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 11111111222233344333 33333433333333333334455667789999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHH
Q 007159 583 RGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 583 ~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
..+|+.+|.+.+++.++..+....
T Consensus 153 ~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 153 EFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999988877666554433
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=2.4e-09 Score=116.90 Aligned_cols=171 Identities=16% Similarity=0.201 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHH
Q 007159 428 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 507 (615)
Q Consensus 428 ~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 507 (615)
.+++..++..+........+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+. +
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~---------~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST---------F 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH---------H
Confidence 34445555555556666777877766 8999999999999999999999999999999999996544221 1
Q ss_pred HHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 508 GPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 508 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
+..+........+... +.+..++.+.+.....+.......+..++++|+++.++......+|..++|.++|++.+..+|
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 155 (485)
T TIGR00711 76 AFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW 155 (485)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc
Confidence 1111111122223333 333444444444444444455566677889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 007159 587 DDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
+..|++.+.+.++..++..+..
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHc
Confidence 9999988877776665554443
No 181
>PRK11043 putative transporter; Provisional
Probab=99.13 E-value=4.6e-09 Score=111.80 Aligned_cols=163 Identities=12% Similarity=0.051 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHH--HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHH
Q 007159 438 WGTFILLTWMPTY--YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 515 (615)
Q Consensus 438 ~~~~~~~~~~p~~--~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 515 (615)
........+.|.+ +.+.+|.+..+.++..++..++..++.++.|++.||+++|+.+..+. ....+....
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~---------~~~~~~~~~ 87 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGL---------SLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHH---------HHHHHHHHH
Confidence 3334444444544 44568999999999999999999999999999999999997544221 111111111
Q ss_pred hccccchHH-HHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHH
Q 007159 516 LSHVRTPAM-AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV 594 (615)
Q Consensus 516 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~ 594 (615)
....+..+. .+..++.+.+.............+..++++++...+..+....++..++|.++|++.+..||+..|++.+
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~ 167 (401)
T PRK11043 88 MLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLF 167 (401)
T ss_pred HHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 111223333 3333333333222232323334556777888889999988899999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhc
Q 007159 595 VLYIIGTLVWNLFAT 609 (615)
Q Consensus 595 ~~~l~~~l~~~~~~~ 609 (615)
++.++..++.....+
T Consensus 168 ~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 168 AITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHcCC
Confidence 877776665554433
No 182
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.13 E-value=4.2e-09 Score=107.86 Aligned_cols=158 Identities=9% Similarity=0.092 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHh---hcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSK---EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~ 285 (615)
+.+..+..++.......+....+.+.+ .+|+++.+.++..+.+..+..++.+..+++.||+|+|+++.++.++..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333445555544445555555566554 36999999999999999999999999999999999999988888877777
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHH
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~ 365 (615)
.++....+ +.. ....-++.|++.+..+|...+...+..++ +.+++.++. ....+|.+++|++.|.+.+..|.+..
T Consensus 222 ~~l~~~~~--~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 222 SIGAALTH--GYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHHHHHcC--CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHH
Confidence 66555443 332 33455678999999999999999998854 456667775 56779999999999999999998888
Q ss_pred HHHHHH
Q 007159 366 FYSFGS 371 (615)
Q Consensus 366 f~~~~~ 371 (615)
|++..+
T Consensus 297 ~~v~~~ 302 (310)
T TIGR01272 297 FALPVP 302 (310)
T ss_pred HHHHHH
Confidence 874433
No 183
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.12 E-value=1.7e-09 Score=112.62 Aligned_cols=181 Identities=12% Similarity=0.078 Sum_probs=134.0
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHH
Q 007159 419 LILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVR 498 (615)
Q Consensus 419 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~ 498 (615)
.++.++.+..+++..++..++...+++++--++++ ++-.+...|...+..-.+.++.-++.+++.+|+|..+++.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~---- 440 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY---- 440 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee----
Confidence 45566677777777777888888888888777777 5766777787777778888899999999999999887654
Q ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhh-hhhccCcchhhHHHHHHHHHH-HHHHHHHHHH
Q 007159 499 KIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAG-VLAGVFGTAA 576 (615)
Q Consensus 499 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~gl~~~~~-~lg~~igp~l 576 (615)
+++.+...-++..+...++|..+-.=++-+...+..+....+ +....||+.++++.|+..... .+|-.+|.++
T Consensus 441 -----lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 441 -----LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred -----ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 233333333444444556666655555555554444444444 455578899999999987664 8899999999
Q ss_pred hhheeccCChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 577 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 577 ~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+|.+.+++|-+..|..+++.+++.++++..+.+
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999888877766544
No 184
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.12 E-value=1.7e-09 Score=114.82 Aligned_cols=151 Identities=17% Similarity=0.105 Sum_probs=114.1
Q ss_pred HhHHHHHhhcCCCchhhHHHHHHHHH-HHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh-hh---ccChHHHHH
Q 007159 228 IAILPMSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV-AA---RIGLPFLLI 302 (615)
Q Consensus 228 ~~~~~i~~~~g~s~~~~g~i~s~~~l-~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~-~~---~~~~~~ll~ 302 (615)
...+.+.+|.|+++.++|++..+... ...++.++.|++.||+|+|+.+.++.++.++..+.... .. ..+...+..
T Consensus 229 ~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 229 GLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 34566667789999999999888764 66677899999999999999988877665333322221 11 112333444
Q ss_pred HHHHHHhhhcchhhHHHHHhhhcccc-cchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHH
Q 007159 303 MRAFMGIGEGVAMPAMNNMLSKWIPV-SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (615)
Q Consensus 303 ~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 378 (615)
..++.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..|++..|++.+++.++..+
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 55566677777778888887777766 78899999999999999999999999999999999999877766555443
No 185
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.12 E-value=8.9e-10 Score=115.62 Aligned_cols=146 Identities=16% Similarity=0.096 Sum_probs=105.5
Q ss_pred hhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCC-chHHH-HHH-HHHHHHHHHHHhhhccC
Q 007159 221 MDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLG-FGV-IWWSVATVLTPVAARIG 296 (615)
Q Consensus 221 ~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Gr-k~~l~-~~~-~l~~i~~~l~~~~~~~~ 296 (615)
.....+....|.+ .+.+|.+..+.+++.+.+.++..++.++.|++.||+.+ |+... ... .+..++..........+
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (379)
T TIGR00881 230 VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAAN 309 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchh
Confidence 3334444455554 56789999999999999999999999999999998643 33222 211 11222222222211123
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF 366 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f 366 (615)
...+++..++.|+......+....++.+.+|+++|+++.|+.+....+|..++|.+.|.+.+.+||++.|
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 4455666677777666666677788999999999999999999999999999999999999999998764
No 186
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.11 E-value=6.7e-09 Score=110.19 Aligned_cols=170 Identities=15% Similarity=0.071 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHH
Q 007159 428 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 507 (615)
Q Consensus 428 ~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 507 (615)
...+..+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+|+.+..+. +
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~---------~ 76 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGA---------A 76 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHH---------H
Confidence 33344444455555566677877766 7999999999999999999999999999999999986544221 1
Q ss_pred HHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh
Q 007159 508 GPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 508 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~ 586 (615)
...+........+... +.+..++.+.+.............+..++++|+++.++.+....++..++|.+++.+.+..+|
T Consensus 77 ~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~ 156 (392)
T PRK10473 77 LFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW 156 (392)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 1111111111222333 333333333333333334444556667789999999999999999999999999998888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 007159 587 DDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~ 607 (615)
+..|++.+++.++..++....
T Consensus 157 ~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 157 QSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888777666554443
No 187
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.11 E-value=6.6e-09 Score=110.38 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=115.1
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHH-HHHHHHHHHhhhccChHHHHHHHHHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW-WSVATVLTPVAARIGLPFLLIMRAFMG 308 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l-~~i~~~l~~~~~~~~~~~ll~~r~l~G 308 (615)
.|.+.+++|++..+.+++...+.++..++.++.+++.||.++ +.++.+.++ .....++....+ +.+.+.+..++.|
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGS--DKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHH
Confidence 466778899999999999999999999999999999999654 444444344 333334433444 4566777888999
Q ss_pred hhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHH
Q 007159 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 309 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 380 (615)
++.+...+...+++.+..| +++++..++......+|..+|+.++|++.+..|++..++..+++..+..++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHH
Confidence 9999999999989998885 5677888888888899999999999999999999988887766655544433
No 188
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.11 E-value=4.2e-09 Score=110.45 Aligned_cols=166 Identities=14% Similarity=0.119 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHH
Q 007159 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 505 (615)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~ 505 (615)
+|..++..++..........+.|.++++.+|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. ....++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~i~ 80 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL--LLLAIP 80 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH--HHHHHH
Confidence 455566666666677777888888788889999999999999999999999999999999999997544322 111111
Q ss_pred HHHHHHHHHHhcccc-chHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec-
Q 007159 506 FLGPAFFLTQLSHVR-TPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ- 582 (615)
Q Consensus 506 ~~~~~~~l~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~- 582 (615)
. ......+ ..+.+ +..++.+.+ ............+..++++|+++.++......+|..+++.+.+.+.+
T Consensus 81 ~-------~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 81 C-------LWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred H-------HHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 1 1111112 33333 333333333 33333444445666778999999999998888888888877776654
Q ss_pred ---------cCChhHHH-HHHHHHHHHHH
Q 007159 583 ---------RGSWDDVF-KVAVVLYIIGT 601 (615)
Q Consensus 583 ---------~~g~~~~f-~~~~~~~l~~~ 601 (615)
..+|+..| ...+++.++..
T Consensus 153 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 153 LIFGAGLPAHLAWGWAFVIVPAGILLLPA 181 (366)
T ss_pred HHhcccccccccccchhHHHHHHHHHHHH
Confidence 24788888 43344443333
No 189
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.10 E-value=1.9e-09 Score=116.23 Aligned_cols=161 Identities=14% Similarity=0.048 Sum_probs=108.3
Q ss_pred HHHHhHHHHHh-hcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH---HHHHHHHhhhccChHHH
Q 007159 225 NMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS---VATVLTPVAARIGLPFL 300 (615)
Q Consensus 225 ~~~~~~~~i~~-~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~---i~~~l~~~~~~~~~~~l 300 (615)
......|.+.+ ..|.++.+.++..+++.++..++.++.|++.||+++++....+..+.. ++.++....+..+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 34456666655 479999999999999999999999999999999965432222322221 12222222221133333
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHH-HHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLG-SVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG-~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 379 (615)
.+..++.|++.............+.+|+++|++++|+.+....+| .++||.+.|.+.++.||.+.|++..++.++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 344455555433332333456778999999999999998887776 5789999999999999999998877766666555
Q ss_pred HHhhhc
Q 007159 380 WLKKAY 385 (615)
Q Consensus 380 ~~~~~~ 385 (615)
.+...+
T Consensus 429 ~~~~~~ 434 (438)
T TIGR00712 429 LIVVMI 434 (438)
T ss_pred HHHHHh
Confidence 555444
No 190
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=9.3e-09 Score=109.70 Aligned_cols=147 Identities=13% Similarity=0.039 Sum_probs=115.0
Q ss_pred hHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhh---ccChHHHHHHH
Q 007159 229 AILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA---RIGLPFLLIMR 304 (615)
Q Consensus 229 ~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~---~~~~~~ll~~r 304 (615)
..|.+ .+++|+++.+.++......++..++.++.|++.||+++|+.+.++.++..++.++..+.. ..+++++++..
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGL 316 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 34554 567899999999988888889999999999999999999999998888877776665432 22455677788
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 376 (615)
++.|++.+...+......... +++++++..+..+....+|..+|+.+++.+.+..++....+..++..++.
T Consensus 317 ~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 317 SLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 889999888777766665444 45899999999999999999999999999988888766555444443333
No 191
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.06 E-value=5.6e-06 Score=88.52 Aligned_cols=276 Identities=8% Similarity=0.030 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCC-----CchhhHHHHHHHHHHHHHH-HHhhHHhhhhcCCchHHHHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNW-----NSTTVGLIQSSFFWGYLLT-QIVGGIWADKFGGKPVLGFGVI 280 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~-----s~~~~g~i~s~~~l~~~l~-~~~~G~l~Dr~Grk~~l~~~~~ 280 (615)
+.++...+.+|+..+..+. +-++.+.+.+ +...+.++.+...+...+. .++.+++++|++|++++.+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3445555555554444333 3345555544 3467889998888877776 8899999999999999887777
Q ss_pred HHHHHHHHHHhhhc----c-------------------------ChHHHHHHHHHHHhhhcchhh-HHHHHhhhcccccc
Q 007159 281 WWSVATVLTPVAAR----I-------------------------GLPFLLIMRAFMGIGEGVAMP-AMNNMLSKWIPVSE 330 (615)
Q Consensus 281 l~~i~~~l~~~~~~----~-------------------------~~~~ll~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~ 330 (615)
.+....+++++.-. . +.|...+..+...+....... ....++.|.++.+|
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 66666665554410 0 112223334444555555555 78899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhhhc-------CC-Cch----HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHH
Q 007159 331 RSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KF-GWP----SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 398 (615)
Q Consensus 331 r~~~~~~~~~~~~lG~~ig~~l~~~l~~-------~~-gw~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (615)
-.+.+++...+.++|.++|+.+..++.+ .. .|. +.+.+.+++..+...+.... .+....++.....+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWV-NRNVLTDPRSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCccccchh
Confidence 9999999999999999999999888763 11 232 12222222222222222222 22111111110001
Q ss_pred HhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH----HHHHHHHHHHHHH
Q 007159 399 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE----SGLFCVLPWLTMA 474 (615)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~----~g~~~~~~~i~~~ 474 (615)
.+ +.+.++...-...++.++++|-++.+.+..++++.....+....-....+.+ -++.+ .|.+....++..+
T Consensus 242 ~~---~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~~gi~tl 317 (472)
T TIGR00769 242 LK---EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTWTGVVSV 317 (472)
T ss_pred hc---cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000011111236677889998888888888877776666665555555544 23333 2334444455555
Q ss_pred HHHHHHHHHHHHhhhcc
Q 007159 475 VFANMGGWIADTLVSKG 491 (615)
Q Consensus 475 ig~~l~g~l~dr~g~~~ 491 (615)
+..++.+++.+|+|-+.
T Consensus 318 ~~~l~~~~l~~~~Gw~~ 334 (472)
T TIGR00769 318 TMMLLSGNVIRKYGWLT 334 (472)
T ss_pred HHHHHHHHHHHHhhHHH
Confidence 56666789999988764
No 192
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.06 E-value=1.3e-08 Score=110.93 Aligned_cols=158 Identities=15% Similarity=0.059 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
.+....++|.+ .+.+|++..+.+++.+...++..++.++.|++.||+|+|+....+ .+..++........
T Consensus 52 ~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~---------~~~~~~~~~~~~~~ 121 (476)
T PLN00028 52 TFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL---------LMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH---------HHHHHHHHHHHHHh
Confidence 33444445555 455899999999998888899999999999999999998644321 11111111111122
Q ss_pred cchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec---------cCChhHH
Q 007159 520 RTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---------RGSWDDV 589 (615)
Q Consensus 520 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~---------~~g~~~~ 589 (615)
.....+ +..++.+.+... ..+......+..++++||++.|+.+....+|..+++.+.+.+.. ..||+.+
T Consensus 122 ~s~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred cCHHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 233333 333333333322 22333345566778999999999988888888887766655432 2489999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007159 590 FKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 590 f~~~~~~~l~~~l~~~~~~ 608 (615)
|++.+++.++..++..++.
T Consensus 201 f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999888877666655543
No 193
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=4.3e-09 Score=112.19 Aligned_cols=149 Identities=14% Similarity=0.187 Sum_probs=106.0
Q ss_pred HHHHHhhcCCCchhhHHHHHHH-HHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH---HhhhccChHHHHHHH-
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSF-FWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIMR- 304 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~-~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~---~~~~~~~~~~ll~~r- 304 (615)
.+.+.+++|+++.+++++.+.. .++..++.+++|++.||+|+|+.+.++.++..+..+.. ++.+ .+.+.+++.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 3456777999999999998665 45688999999999999999998877776665554332 2332 1444444444
Q ss_pred ---HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHH
Q 007159 305 ---AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 305 ---~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
++.|++.+...+..+.++.+.+|.++ .++.....++|.++++.++|.+.+.+||+..|.+.++++++..++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 34556666667777777777776444 45555666778877777899999999999999988877766655544
Q ss_pred hh
Q 007159 382 KK 383 (615)
Q Consensus 382 ~~ 383 (615)
+.
T Consensus 388 ~~ 389 (402)
T PRK11902 388 LM 389 (402)
T ss_pred HH
Confidence 33
No 194
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.05 E-value=1e-08 Score=108.39 Aligned_cols=166 Identities=17% Similarity=0.257 Sum_probs=130.1
Q ss_pred HHHhhhhhHHHHhHHHHHhhcC-CCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhcc
Q 007159 217 LLCNMDRVNMSIAILPMSKEFN-WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~~i~~~~g-~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~ 295 (615)
++.......+..+.+.+.++.| .+....|.+.++..++-++.-...+++..|+|.|++++++.+.+++=..+++...+
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~- 295 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD- 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 4444555556667777788888 77788898889989999999999999999999999999999999998888887732
Q ss_pred ChHHHHH----HHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHH-HHHHHHHHHhhhHhhhhcCCCchH------
Q 007159 296 GLPFLLI----MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWPS------ 364 (615)
Q Consensus 296 ~~~~ll~----~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lG~~ig~~l~~~l~~~~gw~~------ 364 (615)
+.+...+ ...+.|+..+..+.+...++.+..|++.|+++.+++.. ..++|.++|..++|++.+++|-+.
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~ 375 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA 375 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH
Confidence 3333332 34569999999999999999999999999999999887 468999999999999999877554
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 007159 365 VFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 365 ~f~~~~~~~~~~~~~~~~~ 383 (615)
.+.+.+++.++..+++...
T Consensus 376 ~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 376 VFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3344444444444444433
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=6.8e-09 Score=110.26 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 503 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~ 503 (615)
|.++.+++..++..++........+.+.. .++.+....+++.+.+.+...+..++.|++.||+++|+++..+.. ...
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~--~~~ 79 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANG--IKL 79 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHH--HHH
Confidence 35666777777777666555555665554 478899999999999999999999999999999999987664431 111
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 504 IGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 504 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
++.+.... . ..+ .+..++.+.+.....+.....+.+.+++++|+++.|+.+....++..+||.++|++.+.
T Consensus 80 ~~~~~~~~-----~--~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 80 LGCLLMLF-----G--IHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHH-----H--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 1 111 22233444444445555555567778889999999999999999999999999999986
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHH
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
. +...+.+.+++.+++.+....+
T Consensus 151 ~-~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 151 H-AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcC
Confidence 4 6666666655555444443333
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=4.5e-09 Score=113.16 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=103.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHH
Q 007159 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 319 (615)
Q Consensus 240 s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~ 319 (615)
+..+.+++.++..++.+++.++++++.||+|+|+++..+.++.+++.++..+.++ +.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888889999999999999999999999999999888888776665432 456667778888999999999999
Q ss_pred HHhhhccc-------ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 320 NMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 320 ~~i~~~~~-------~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
++++|..+ ++++|..+|+.+....+|..+|+.+.|.+.+..||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998865 45579999999999999999999999999887666
No 197
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.04 E-value=6.6e-09 Score=108.18 Aligned_cols=160 Identities=8% Similarity=0.053 Sum_probs=132.5
Q ss_pred HHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
+..+...+.++-+.+...+|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=.+++++++ +.+.+.+.+.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~kl 320 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKL 320 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHH
Confidence 33334444444455667799999999999999999999999999999999999999999999999999 8889999999
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHH-HHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhh
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 384 (615)
+.|+-.+....+...++.+.+|++-.++...+. +.+.++|.++.+.++|.+.++.|.+.+|++++.+.++..++..+..
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 999999999999999999999888777777774 6788999999999999999999999999999888777666666555
Q ss_pred cCC
Q 007159 385 YSS 387 (615)
Q Consensus 385 ~~~ 387 (615)
+++
T Consensus 401 ~~~ 403 (412)
T PF01306_consen 401 KKD 403 (412)
T ss_dssp --S
T ss_pred cCC
Confidence 443
No 198
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.03 E-value=4e-09 Score=108.15 Aligned_cols=380 Identities=16% Similarity=0.106 Sum_probs=204.5
Q ss_pred HHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh----cCCchHH-HHHHHHHHHHHHHHHh
Q 007159 217 LLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGKPVL-GFGVIWWSVATVLTPV 291 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr----~Grk~~l-~~~~~l~~i~~~l~~~ 291 (615)
+..-+....-..+.+++.+++|++....+.+.-...+...+.+|+.|..+|| |||||.. ..+.++..++.++..+
T Consensus 42 ~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~ 121 (498)
T KOG0637|consen 42 AGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGY 121 (498)
T ss_pred HHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhh
Confidence 3334555555667888999999999999999999999999999999999996 7877654 4556666677777766
Q ss_pred hhccC---------------hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhh-HHHHHHHHHHHHHHHHhhhHhh
Q 007159 292 AARIG---------------LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSR-SLAFVYSGMYLGSVTGLAVSPI 355 (615)
Q Consensus 292 ~~~~~---------------~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~lG~~ig~~l~~~ 355 (615)
+.... ...+++.--+.=++.-....++-+++.|...++++.+ +++++.....+|..+|..++++
T Consensus 122 aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 122 AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 65211 1223333344445666788899999999998777776 9999999999999999888874
Q ss_pred hhcCCCchHH--HHHHHHHHHHHH---------HHHHhhhc----CCCCCCccccHHHHhhhhcCCccccccccccHHH-
Q 007159 356 LIQKFGWPSV--FYSFGSLGSIWF---------ALWLKKAY----SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKL- 419 (615)
Q Consensus 356 l~~~~gw~~~--f~~~~~~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (615)
. +|+-. |.....+.+... +.+....+ ..+++++...+.... +.+..+.+.....+..
T Consensus 202 ~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~---~~~~~~~~~~~e~fG~~ 274 (498)
T KOG0637|consen 202 L----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA---RSKSSKLPFLLEIFGAL 274 (498)
T ss_pred c----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc---cccccCcchHHHHhchH
Confidence 3 33221 111111100000 00000000 001110000000000 0000000000000001
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChh----------------HHHHHHHHHHHHHHHHHHHHHH
Q 007159 420 ILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLT----------------ESGLFCVLPWLTMAVFANMGGW 482 (615)
Q Consensus 420 l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~-~~g~s~~----------------~~g~~~~~~~i~~~ig~~l~g~ 482 (615)
....++.+.+++...+...+.+.+..|...++-+ +++-++. ...+-+.+..+...+.+....+
T Consensus 275 ~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~ 354 (498)
T KOG0637|consen 275 KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEK 354 (498)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 1235678888888888888887777777666533 3333321 1233445667777788888999
Q ss_pred HHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh------------ccccchHHHHHHHHHHhhhhhhhhhhhhhhhh-c
Q 007159 483 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL------------SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQ-D 549 (615)
Q Consensus 483 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 549 (615)
+.+|+|.|+.+..+...+....++.++..-.... .....++.++........-..+.+...+.... .
T Consensus 355 l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~ 434 (498)
T KOG0637|consen 355 LSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIE 434 (498)
T ss_pred HHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCcccccccccccccccc
Confidence 9999997666554432222222222211100000 00000111111111111111111111111111 0
Q ss_pred cC--cchhhHHHHHHHHHHHHHHHHHHHHhhheeccCCh--hHHHHHHHHHHHHHHHH
Q 007159 550 IG--PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW--DDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 550 ~~--~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~--~~~f~~~~~~~l~~~l~ 603 (615)
.. ...+|...|+.+....+.+++.....|.+.+..|- ..++...++..+++.++
T Consensus 435 ~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i~ 492 (498)
T KOG0637|consen 435 IGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGIV 492 (498)
T ss_pred ccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHHH
Confidence 11 13347888889999999999999988988887432 33333334434444333
No 199
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.03 E-value=7.7e-08 Score=93.92 Aligned_cols=152 Identities=14% Similarity=0.124 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
||..+.......... ...+.++.+-|.+.+.+|+|.+|...+.+...+|..++ ++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~-Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCS-GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhc-CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 466655555555444 45666788899999999999999999999999998874 8889999999999999999999999
Q ss_pred HHHHHHhhhc-----cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 007159 285 ATVLTPVAAR-----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (615)
Q Consensus 285 ~~~l~~~~~~-----~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~ 359 (615)
+..+..++-+ .++|.+.+..++.|.+.+....+......+.|| ++||.+.|+.-...++++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 9887665432 246777777778888877777787777788995 6899999999999999998877777666654
No 200
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.03 E-value=1.5e-08 Score=109.04 Aligned_cols=156 Identities=11% Similarity=0.040 Sum_probs=99.0
Q ss_pred hhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHH--hhhccChHH
Q 007159 223 RVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP--VAARIGLPF 299 (615)
Q Consensus 223 ~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~--~~~~~~~~~ 299 (615)
...+...+|.+ .+++|.+..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... .....+...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 33344556665 456899998999999988888899999999999999999988776654433332111 111112222
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHH-HHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWF 377 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~ 377 (615)
.+..-++.+++.+...+....+++|++|++.|+.++|+.+....+ +....|.+.+.+ +..| |...++..++..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHH
Confidence 222222233333344456678889999999999999998876553 344577777755 4445 5555554444444443
Q ss_pred HH
Q 007159 378 AL 379 (615)
Q Consensus 378 ~~ 379 (615)
+.
T Consensus 418 ~~ 419 (432)
T PRK10406 418 LV 419 (432)
T ss_pred HH
Confidence 33
No 201
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.9e-09 Score=113.03 Aligned_cols=187 Identities=16% Similarity=0.104 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHH
Q 007159 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (615)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i 284 (615)
|+...+.+.+.......+......+...+.++.|++..+.-++.....+...+..+++..+.||+|||++++.+..+..+
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAV 347 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 34444444444445555556666777789999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhhc----c-Ch--HHHHHHHHHHHhhhcch-hhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 285 ATVLTPVAAR----I-GL--PFLLIMRAFMGIGEGVA-MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 285 ~~~l~~~~~~----~-~~--~~ll~~r~l~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
..+++..... . ++ +..+++.++..++.+.. -|...-+.+|++|++.|+.++++......++..+-......+
T Consensus 348 ~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l 427 (485)
T KOG0569|consen 348 ALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL 427 (485)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776554321 1 11 11234444444433332 478888999999999999999999999999998888888888
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 007159 357 IQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP 392 (615)
Q Consensus 357 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (615)
.+.+|- +.|+++.+.+++..+..++..|+.+.+..
T Consensus 428 ~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 428 QNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 887776 77888888888888888877777655443
No 202
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.01 E-value=2.3e-08 Score=106.19 Aligned_cols=166 Identities=8% Similarity=-0.019 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Q 007159 431 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPA 510 (615)
Q Consensus 431 l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 510 (615)
...++...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+|+.+..+. . .....
T Consensus 15 ~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~--~-----~~~~~ 86 (394)
T PRK11652 15 LLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGM--S-----IFILG 86 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH--H-----HHHHH
Confidence 33333334444444556766655 8999999999999999999999999999999999997544321 1 11111
Q ss_pred HHHHHhccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHH
Q 007159 511 FFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDV 589 (615)
Q Consensus 511 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~ 589 (615)
.... ...+..+.+ +..++.+.+.....+.......+..++++++.+.++.+....++..++|.++|.+.+..||+.+
T Consensus 87 ~~~~--~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 164 (394)
T PRK11652 87 TLVA--LFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRAC 164 (394)
T ss_pred HHHH--HHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 1111 112233333 3333333332222222222333445668899999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007159 590 FKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 590 f~~~~~~~l~~~l~~~~ 606 (615)
|++.+++.++..++..+
T Consensus 165 f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 165 YLFLLLLGAGVTFSMAR 181 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99887776655444333
No 203
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.01 E-value=1e-08 Score=108.14 Aligned_cols=158 Identities=14% Similarity=0.080 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 519 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 519 (615)
.......+|.+.++ +|++..+.+++.+...++..++.++.|++.||+++|+.+..+. +..++........
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~---------~~~~i~~~~~~~~ 76 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGT---------LVFALAAVACALA 76 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHH---------HHHHHHHHHHHHH
Confidence 34455677888776 7999999999999999999999999999999999886543221 1111111111112
Q ss_pred cchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHH
Q 007159 520 RTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYI 598 (615)
Q Consensus 520 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l 598 (615)
+..+ +.+..++.+.+.....+.......+..++++|+++.++.+....+|..++|.+++.+.+..+|+..|++.+++.+
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAI 156 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 2333 333333334333333334444455566778999999999999999999999999999998999999998888777
Q ss_pred HHHHHHHHH
Q 007159 599 IGTLVWNLF 607 (615)
Q Consensus 599 ~~~l~~~~~ 607 (615)
+..++..+.
T Consensus 157 ~~~~~~~~~ 165 (377)
T PRK11102 157 LAAALVFFF 165 (377)
T ss_pred HHHHHHHHh
Confidence 766554443
No 204
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.00 E-value=1e-08 Score=111.16 Aligned_cols=174 Identities=17% Similarity=0.184 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcC--CchHHHHHHHHHHHHH
Q 007159 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG--GKPVLGFGVIWWSVAT 286 (615)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~G--rk~~l~~~~~l~~i~~ 286 (615)
++.+.+...+..++..+....+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 34444445555677777778899999999999999999999999999999999999999987 4556677777778888
Q ss_pred HHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHH
Q 007159 287 VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSV 365 (615)
Q Consensus 287 ~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~ 365 (615)
+.+++++ +++.++...++.|+..|........++.|+.+.++...+.|+.....+++.++||+++|++.+..| |...
T Consensus 380 ~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 380 LFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHA 457 (509)
T ss_pred HHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeee
Confidence 8888888 788899999999999999988888899999999999999999999999999999999999999887 9999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 007159 366 FYSFGSLGSIWFALWLKKA 384 (615)
Q Consensus 366 f~~~~~~~~~~~~~~~~~~ 384 (615)
|+..++..++...+++...
T Consensus 458 f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhhcChHHHHHHHHHHHhH
Confidence 9988888777665555444
No 205
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.98 E-value=1.2e-08 Score=112.19 Aligned_cols=155 Identities=14% Similarity=0.010 Sum_probs=103.4
Q ss_pred HHHhHHHHHhhcCCCchhhHH------------HHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhh
Q 007159 226 MSIAILPMSKEFNWNSTTVGL------------IQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (615)
Q Consensus 226 ~~~~~~~i~~~~g~s~~~~g~------------i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~ 293 (615)
.....|.+.++.|.+....+. ...+..++.+++.++.++++||+|||++++++.++.+++.++..+..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 334467777888876543221 23344456666888899999999999999888877777665555432
Q ss_pred c--cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC----------CC
Q 007159 294 R--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK----------FG 361 (615)
Q Consensus 294 ~--~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~----------~g 361 (615)
. .....+....++..++.....+....+.+|.+|.+.|++++|+.+....+|.+++|.+.+++.+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 1 01111221112222222233456677789999999999999999999999999999999988873 34
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 007159 362 WPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 362 w~~~f~~~~~~~~~~~~~~ 380 (615)
+...|++.+++.++..+..
T Consensus 467 ~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFT 485 (502)
T ss_pred chHHHHHHHHHHHHHHHHh
Confidence 4567777776666554443
No 206
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.98 E-value=1.8e-07 Score=93.57 Aligned_cols=362 Identities=13% Similarity=0.009 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh-----hcCCchHHHH-HHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-----KFGGKPVLGF-GVI 280 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D-----r~Grk~~l~~-~~~ 280 (615)
..+.++...+.+.+.-..... .+|.+.+.-|.|.++.+....+ +.. ...-++|.++.| |+||||..++ +..
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~a-y~P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFA-YWP-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhh-hhH-HHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 344555566777777777777 8999999888888877654332 222 234578899999 9999876443 333
Q ss_pred HHHHHHHHHHhhh---------ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhh
Q 007159 281 WWSVATVLTPVAA---------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (615)
Q Consensus 281 l~~i~~~l~~~~~---------~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~ 351 (615)
+.+..+.+.+... .++...+....++.-+..+.-..+...+.-.+..+++.|-+......+..+|.++|..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 3333333222211 1122223334466677778888888888888888899888888888888888887766
Q ss_pred hHhhhhc-------CCCch---------HHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhhhhcCCccccccccc
Q 007159 352 VSPILIQ-------KFGWP---------SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVI 415 (615)
Q Consensus 352 l~~~l~~-------~~gw~---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (615)
+.-.+.. ..+|. .-+++.+.+..+...+..+..++++.+..++......+ ..+
T Consensus 188 ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~-----------~yk 256 (510)
T KOG3574|consen 188 VFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHE-----------SYK 256 (510)
T ss_pred eeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHH-----------HHH
Confidence 5433322 11222 11223344444443333333333322211000000000 011
Q ss_pred cHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHH
Q 007159 416 PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (615)
Q Consensus 416 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~ 495 (615)
-++++++-|.+..+.......-.++.+-....+.-+.+ .|++.++.++......-..++.....|++.... ++ +..
T Consensus 257 ~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~--~p-l~~ 332 (510)
T KOG3574|consen 257 LLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGP--RP-LNV 332 (510)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCC--Cc-chH
Confidence 34556666777777777777777777777777888877 699999988765444444444444444333211 11 111
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhcc-c----cc---hHHHHH-HHHHHhhhh-hhhhhhhhhhhhccCcchhhHHHHHHHH
Q 007159 496 AVRKIMQSIGFLGPAFFL-TQLSH-V----RT---PAMAVL-CMACSQGSD-AFSQSGLYSNHQDIGPRYAGVLLGLSNT 564 (615)
Q Consensus 496 ~~~~~~~~~~~~~~~~~l-~~~~~-~----~~---~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~gl~~~ 564 (615)
-.+.+-.-++.......+ ..... . .. +..+.+ .-.+..++. ..+........+..+|...|+.+.+.|+
T Consensus 333 ~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNT 412 (510)
T KOG3574|consen 333 FLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNT 412 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHH
Confidence 111111111111111111 11111 1 11 111111 122222222 2223333334556678999999999999
Q ss_pred HHHHHHHHHHHHhhheeccCCh
Q 007159 565 AGVLAGVFGTAATGYILQRGSW 586 (615)
Q Consensus 565 ~~~lg~~igp~l~G~l~~~~g~ 586 (615)
..++|+---..+.+++.|...+
T Consensus 413 LsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 413 LSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred HHHhcCCcHHHHHHHhcccCce
Confidence 9999999988999999886543
No 207
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=3.6e-08 Score=105.06 Aligned_cols=181 Identities=12% Similarity=0.044 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 007159 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 503 (615)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~ 503 (615)
+.++...+..+..+...+.+....+.+-++.+|++..+.+++.++..++..+.++..|++.||+|.|+...... .+..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~--ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFST--AILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH--HHHH
Confidence 44555555544444444444444555555469999999999999999999999999999999999997544322 1111
Q ss_pred HHHHHHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhee-
Q 007159 504 IGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL- 581 (615)
Q Consensus 504 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~- 581 (615)
+..+...+ ......+++. +.+..++.+.+ .....+....+....+++++|++.|+....+++|..+++++...+.
T Consensus 112 i~~~~~~~--a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 112 IPCVWLGI--AVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHH--HHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 11111110 0000112333 33334444443 4445555555666788899999999997666666665554443322
Q ss_pred ----c-------------cCChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 582 ----Q-------------RGSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 582 ----~-------------~~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+ ..+++.++++..++.+++.++.++..+
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 233677777777777666655555433
No 208
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=1.5e-08 Score=103.49 Aligned_cols=150 Identities=22% Similarity=0.224 Sum_probs=125.6
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHh
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGI 309 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~ 309 (615)
...-..++|++..++.++.....+..+++++++|+|.||+|.|+++.++++++.+..+...+.. .-..+.++.++.|+
T Consensus 276 ~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~ 353 (438)
T COG2270 276 GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWILGLLVGT 353 (438)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHH
Confidence 3334559999999999999999999999999999999999999999999999888877655554 33456677789999
Q ss_pred hhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHHHHHH
Q 007159 310 GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 310 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~ 381 (615)
..|......-++..+..|++|-++.+|+++...-.+..+||.+.+.+.+..| -|..+..+.++..+.++++.
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 9999999999999999999999999999999999999999999999988665 56666655555444444433
No 209
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.97 E-value=4.2e-08 Score=104.92 Aligned_cols=154 Identities=10% Similarity=0.081 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 007159 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 522 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 522 (615)
....+|.. .+.+|.+....++..+++.++..++.++.|+++||+|||+.+..+. ++..+........+..
T Consensus 35 ~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~---------~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 35 IQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGA---------LIFTLACAATLFTTSM 104 (413)
T ss_pred hccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHH---------HHHHHHHHHHHHcCCH
Confidence 33344554 4458999999999999999999999999999999999997554321 1111111111122333
Q ss_pred H-HHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHH
Q 007159 523 A-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 523 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~ 601 (615)
. +.+.-++.+.+.............+..++++++++.++.+....++..+||.+++.+.+..||+..|++.+++.+++.
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3 333333333333222222222334455678899999999999999999999999999988999999999888877766
Q ss_pred HHHHH
Q 007159 602 LVWNL 606 (615)
Q Consensus 602 l~~~~ 606 (615)
+..++
T Consensus 185 ~~~~~ 189 (413)
T PRK15403 185 VGLLL 189 (413)
T ss_pred HHHHH
Confidence 55433
No 210
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.96 E-value=3.9e-08 Score=93.59 Aligned_cols=359 Identities=13% Similarity=0.104 Sum_probs=191.2
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHH
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~l 300 (615)
.+...-+|++..+.+.+|....++|.++-......+++..+.|-++|+.|||+.-+.-.+.+.++++ .-.++ .+-.+
T Consensus 51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSp--qYkVL 127 (454)
T KOG4332|consen 51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSP--QYKVL 127 (454)
T ss_pred hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCC--ceEEE
Confidence 4445566777778889999999999998888888899999999999999999976554444444333 22333 56779
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhH-------HHHHH-HHHHHHHHHHhhhHhhhhcCC--CchHHHHHHH
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS-------LAFVY-SGMYLGSVTGLAVSPILIQKF--GWPSVFYSFG 370 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~-------~~~~~-~~~~lG~~ig~~l~~~l~~~~--gw~~~f~~~~ 370 (615)
+++|++.|++.+..+.+..++...-- .++|+.- ++-.. .+..+-.+++.+.+..+.+.+ |.-..|-..+
T Consensus 128 mVGR~LGGiaTsLLFSaFEsWliaEH-nekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAa 206 (454)
T KOG4332|consen 128 MVGRVLGGIATSLLFSAFESWLIAEH-NEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAA 206 (454)
T ss_pred eehhhhhhHHHHHHHHHHHHHHHHHh-hhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHH
Confidence 99999999999999988888754332 1233321 11111 233444556666666666654 4455565544
Q ss_pred HHHHHHHHHHHhhhcC---CCCCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHH-H
Q 007159 371 SLGSIWFALWLKKAYS---SPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT-W 446 (615)
Q Consensus 371 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~ 446 (615)
.+..+...+.+....+ .|.+++.....-+ ...+-+..++++.++..+..++-..++.+.. |
T Consensus 207 cfLaigmAvil~~W~ENygdps~~kdlltqf~---------------gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLW 271 (454)
T KOG4332|consen 207 CFLAIGMAVILSSWSENYGDPSENKDLLTQFK---------------GAARAIASDEKIALLGAIQSLFEGSMYTFVFLW 271 (454)
T ss_pred HHHHHHHHHHHhhhhhccCChhhhHHHHHHhh---------------HhHHHHhcchHHHHHHHHHHHHhhhhheeeeee
Confidence 4444433333332222 2222111111100 0223455667776666555555544444433 4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HH
Q 007159 447 MPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MA 525 (615)
Q Consensus 447 ~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 525 (615)
.|..--+..+ .--|.+++-+.++.++|+-+..++..|-..+--...-+...+....+.+........+....+. .+
T Consensus 272 TPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~ 348 (454)
T KOG4332|consen 272 TPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESL 348 (454)
T ss_pred cccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHH
Confidence 4433211111 2247788888888888888777776664443221111111111111111111111111112222 23
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc--CChhHHHHHHHHHHHHHHHH
Q 007159 526 VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR--GSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~--~g~~~~f~~~~~~~l~~~l~ 603 (615)
+.+..+-.+.+.+++.....-.+.+|.+.|++.+-++..--++-.-++- .-.-.+. .+-+.+|-++.+...++.+.
T Consensus 349 i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvL--ynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 349 IGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVL--YNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhh--eecccccCccccchhhhhhHHHHHHHHHH
Confidence 3333333444445555555566667778888766554433333222211 1111122 34457777777777666544
No 211
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.95 E-value=2.9e-08 Score=103.86 Aligned_cols=135 Identities=13% Similarity=0.068 Sum_probs=107.5
Q ss_pred hHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-CCchHHHHHHHHHHHHHHHHHhhhccChHHHHH
Q 007159 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLI 302 (615)
Q Consensus 224 ~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~ 302 (615)
.......|.+.++.|.+..+.+++.+++.++.+++.++.|++.||+ +||+.+.++.++.+++.+++.+... .... .
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~ 290 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM--HGLW-A 290 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh--hHHH-H
Confidence 3344567777778899999999999999999999999999999999 5666777777777777776666542 2222 2
Q ss_pred HHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 007159 303 MRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (615)
Q Consensus 303 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g 361 (615)
..++.|++.+...+...+.+.+..+ +++++...++.+....+|.++||.+.|++.++.|
T Consensus 291 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 291 WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567899999998888787766554 4667888999998889999999999999998765
No 212
>TIGR00898 2A0119 cation transport protein.
Probab=98.94 E-value=2.1e-08 Score=110.27 Aligned_cols=147 Identities=14% Similarity=-0.022 Sum_probs=111.3
Q ss_pred HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhh
Q 007159 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (615)
Q Consensus 232 ~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~ 311 (615)
.....++.+.. +...+..+..+.+.++.+++.||+|||+.+.++.++.+++.++..+.+....+..++..++.+++.
T Consensus 348 ~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 348 LDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 33445555432 333445567778888999999999999999999998888888777766333344556666777777
Q ss_pred cchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 312 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
+..++....+..|.+|++.|+.++|+.+....+|.+++|.+.+ +. ..++...+++.+++.++..++.+..
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 8888899999999999999999999999999999999999988 43 3566677777776666655554443
No 213
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.93 E-value=9.1e-08 Score=102.10 Aligned_cols=171 Identities=10% Similarity=0.023 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHH
Q 007159 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 505 (615)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~ 505 (615)
++.+++..++..+........+|.+ ++.+|.+..+.|++.+...++..+++++.|++.||+|+|+....+. .
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~-------~ 76 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL-------F 76 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH-------H
Confidence 4455555555555555555677766 5668999999999999999999999999999999999996544322 1
Q ss_pred HHHHHHHHHH-hccccchHHH-HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 506 FLGPAFFLTQ-LSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 506 ~~~~~~~l~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
+...+..+.. ....+.++.+ +..++.+.+.............+..+++++++..++.+.+..+|..++|.+.+.+...
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111111 1112233333 3334444444333333333344455678899999999999999999999999887532
Q ss_pred --------------------------CChhHHHHHHHHHHHHHHHHH
Q 007159 584 --------------------------GSWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 584 --------------------------~g~~~~f~~~~~~~l~~~l~~ 604 (615)
.+|+.+|++.+++.++..+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899988887766655444
No 214
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.93 E-value=2.3e-08 Score=121.14 Aligned_cols=144 Identities=15% Similarity=0.218 Sum_probs=120.0
Q ss_pred HhHHH-HHhhcCCCch-hhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHH
Q 007159 228 IAILP-MSKEFNWNST-TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (615)
Q Consensus 228 ~~~~~-i~~~~g~s~~-~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~ 305 (615)
..+|. +.+.+|++.. +.|++.++..++.+++.+++|++.||+++++++.++.++.+++.++..+.. +.+.++++.+
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 330 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLFF 330 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHH
Confidence 34444 4667899998 999999999999999999999999999999999888888888887777766 6777888889
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCCchHHHHHHHHHH
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFGSLG 373 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~gw~~~f~~~~~~~ 373 (615)
+.|++.++..+...+++.+..|+++|++++|+.+....+|.++++.+++.+.. .+++...|++.+.+.
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888888876654 234555665544443
No 215
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.92 E-value=7.2e-07 Score=92.56 Aligned_cols=321 Identities=13% Similarity=0.084 Sum_probs=175.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhh
Q 007159 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 323 (615)
Q Consensus 244 ~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~ 323 (615)
.+.+.-+-.+..++..+.+.++.+|+..+.=+.+..++..++.++.++++ +.++-+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 34566667778888888888889998876666677778888999888887 7777888888999999988888888754
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc--hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc----HH
Q 007159 324 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR----AE 397 (615)
Q Consensus 324 ~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 397 (615)
.+++ ...+-+..+.+.++++|+..--.+.. .|+ |..+++...+.++..+.++...+.++.+.+..+ .+
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~ 212 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDE 212 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCc
Confidence 5543 35778888888889988887766666 554 667776666655444444433332221111000 00
Q ss_pred HHhhhhcCCcc---ccccccccHHH-HhhhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHhCCChhHHHHHHHHHHH
Q 007159 398 EKRHILGGSIS---KEAVSVIPWKL-ILSKAPVWALIISHFCHNWGTFILLT-WMPTYYN-QVLKFNLTESGLFCVLPWL 471 (615)
Q Consensus 398 ~~~~~~~~~~~---~~~~~~~~~~~-l~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~~~-~~~g~s~~~~g~~~~~~~i 471 (615)
..++....... .+......+++ +.+-++++..++-.++.++..+.++. ..|...- ....-......++...+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~ 292 (402)
T PF02487_consen 213 AEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQL 292 (402)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHH
Confidence 00000000000 00001111211 11222333333333444445544433 3333321 1112123344555556666
Q ss_pred HHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccC
Q 007159 472 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIG 551 (615)
Q Consensus 472 ~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (615)
|..+++--..++ .-|++.+.. ++..+-++...+-......++.+.+++.++..|..++..+......+.++.+
T Consensus 293 GVFISRSS~~~~----rir~lwils---~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~ 365 (402)
T PF02487_consen 293 GVFISRSSLPFF----RIRRLWILS---LLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVP 365 (402)
T ss_pred HHhhhhcceeee----ehhhHHHHH---HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC
Confidence 665555433221 223222211 1111111111111111112233333444555555555566666667788888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 007159 552 PRYAGVLLGLSNTAGVLAGVFGTAATGY 579 (615)
Q Consensus 552 ~~~~g~~~gl~~~~~~lg~~igp~l~G~ 579 (615)
+++|..++|.....-.+|..++..++=.
T Consensus 366 ~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 366 PEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999999888888888776544
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.92 E-value=7.7e-07 Score=93.85 Aligned_cols=317 Identities=15% Similarity=0.047 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhccc
Q 007159 248 QSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP 327 (615)
Q Consensus 248 ~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~ 327 (615)
.++.+..+.++.++.+.+.|+.|.|+.+.++..++....+.+.+. |-+.+++...+.|+|.+..+..-..++++..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 777888888999999999999999999999999999887776655 45568899999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC--------Cc-hHH----------HHHHHHHHHHHHHHHHhhhcCCC
Q 007159 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--------GW-PSV----------FYSFGSLGSIWFALWLKKAYSSP 388 (615)
Q Consensus 328 ~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~--------gw-~~~----------f~~~~~~~~~~~~~~~~~~~~~~ 388 (615)
++.+.+..++..+....+.++|..+...+.... +- ++. ..+.+++..+..+... .....|
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i-~~~~~p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSII-NFDFLP 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhh-heeecC
Confidence 999999999999988888888876654443211 11 111 1111111111111011 011111
Q ss_pred CCCccccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCh-hHHHHH
Q 007159 389 KEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNL-TESGLF 465 (615)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~--~g~s~-~~~g~~ 465 (615)
.++.....+..+ ..........-++++++++..+....+..++.........|..+.-. .+.+. ...++.
T Consensus 212 ~~~~~~~~~~~~-------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~ 284 (461)
T KOG3098|consen 212 SKDVVNCKSSSE-------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIY 284 (461)
T ss_pred ccchhhhhhhcc-------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHH
Confidence 111100000000 00000001223355666766666655555444444444555544322 23332 234555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc----------------cchHHHHHHH
Q 007159 466 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV----------------RTPAMAVLCM 529 (615)
Q Consensus 466 ~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------------~~~~~~~~~~ 529 (615)
....+++.+++....+.+.+|..+...... +.+...+......+.....+ +...+..++.
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~----~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPT----VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcc----hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 556667777777777777777654332111 11111111111111111111 1133455555
Q ss_pred HHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 007159 530 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 579 (615)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~ 579 (615)
+..+..........+.+.....|+.+..+.++.-.-..++..++-.....
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 66666667777777777777778899998888888777777666555444
No 217
>PRK10133 L-fucose transporter; Provisional
Probab=98.89 E-value=6.7e-08 Score=104.07 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=111.4
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcc
Q 007159 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~ 313 (615)
.+.+|+++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.+ +. ..+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GH-VGLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--Ch-HHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999888877777666655554 32 234566788999999
Q ss_pred hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHH
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWF 377 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~ 377 (615)
.+|...+...+..+ ++.+.+.++... ..+|..++|.+.|.+.+..| -+..|++..+..+...
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 99999999999885 456777777764 45788889999999999887 7888876555444433
No 218
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.89 E-value=3e-08 Score=120.00 Aligned_cols=150 Identities=13% Similarity=0.075 Sum_probs=117.9
Q ss_pred HHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh------------
Q 007159 226 MSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA------------ 292 (615)
Q Consensus 226 ~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~------------ 292 (615)
+....|.+ .+.+|.+..+.|++.+++.++.+++.++.|++.|+.++++.+..+.++.+++.+.+.+.
T Consensus 244 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 244 VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 33445555 45689999999999999999999999999999998887776666666655555444332
Q ss_pred ------hccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCCchHH
Q 007159 293 ------ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSV 365 (615)
Q Consensus 293 ------~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~gw~~~ 365 (615)
...+.+.+++..++.|++.+...+...+++.+..|++.+|+++|+.+....+|..+|+++++.+.. ..++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 002556677888899999999999999999999999999999999999999999999999998874 4566766
Q ss_pred HHHHHHHHHH
Q 007159 366 FYSFGSLGSI 375 (615)
Q Consensus 366 f~~~~~~~~~ 375 (615)
|++.+++.++
T Consensus 404 ~~~~~~~~~~ 413 (1140)
T PRK06814 404 ILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHH
Confidence 6655544333
No 219
>PRK09848 glucuronide transporter; Provisional
Probab=98.89 E-value=2.3e-08 Score=108.23 Aligned_cols=137 Identities=16% Similarity=0.145 Sum_probs=107.0
Q ss_pred HHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHH
Q 007159 226 MSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (615)
Q Consensus 226 ~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r 304 (615)
.....|.+ .+.+|.+....++......++.+++.++++++.||+|+|+++.++.++.+++.++..+.+..+++.+++..
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 33344444 44567666555555555567788899999999999999999999999888887777665433566677778
Q ss_pred HHHHhhhcchhhHHHHHhhhccccc-------chhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVS-------ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
++.|+|.+...+...++.+|..|.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999999999988654 358889999999999999999999988765554
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.89 E-value=1.9e-06 Score=96.18 Aligned_cols=154 Identities=21% Similarity=0.265 Sum_probs=124.1
Q ss_pred hHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHHHHHHHHhhhcc------ChHHHH
Q 007159 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARI------GLPFLL 301 (615)
Q Consensus 229 ~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i~~~l~~~~~~~------~~~~ll 301 (615)
.+..+.+.+|++......+...+....-+.++++|.++|+ +|+++.+.++.++..++.++.++.... .....+
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 3444566789999999999999999899999999999997 699999999999999999887764311 123356
Q ss_pred HHHHHHHhhhcchhhHHHHHhhhccccc---chhhHHHHHHHHHHHHHHHHhhhHhhhhcC-------CCchHHHHHHHH
Q 007159 302 IMRAFMGIGEGVAMPAMNNMLSKWIPVS---ERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------FGWPSVFYSFGS 371 (615)
Q Consensus 302 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~-------~gw~~~f~~~~~ 371 (615)
++..+..+|.|..-+...+...|-++++ ++-..+.++..+.++|..+++.+.+++.+. .+|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 7778889999999999999999999754 356778888889999999999999988743 369999998887
Q ss_pred HHHHHHHHHHh
Q 007159 372 LGSIWFALWLK 382 (615)
Q Consensus 372 ~~~~~~~~~~~ 382 (615)
+.++.++++..
T Consensus 170 ~m~ia~lvf~~ 180 (654)
T TIGR00926 170 LMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHH
Confidence 77766665544
No 221
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.88 E-value=2.8e-08 Score=108.02 Aligned_cols=172 Identities=11% Similarity=0.039 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHH--------HHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVL--------GFGVI 280 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l--------~~~~~ 280 (615)
...++..+........+...+|.+ .+.+|.+..+.|++.++..++..++.++.|+++||+++|+.. ..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 333444444445555555667765 566899999999999999999999999999999998654221 11111
Q ss_pred HHHHHHHHHHhhh-ccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 007159 281 WWSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (615)
Q Consensus 281 l~~i~~~l~~~~~-~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~ 359 (615)
+...+..+..... ..+....+++..+.+.+.+...+.......+..| +.+|.++++.+....+|..++|.+.+.+.+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 344 GLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 1111111111111 1133334444455555555555555555567664 5899999999999999999999999988765
Q ss_pred C---CchHHHHHHHHHHHHHHHHHHh
Q 007159 360 F---GWPSVFYSFGSLGSIWFALWLK 382 (615)
Q Consensus 360 ~---gw~~~f~~~~~~~~~~~~~~~~ 382 (615)
. +|...|++.+++.++..++...
T Consensus 423 ~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 423 DSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHeee
Confidence 3 3888888877776665555444
No 222
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.88 E-value=1.2e-07 Score=99.55 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccc-c
Q 007159 443 LLTWMPTYYNQVLKFNLTE-SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV-R 520 (615)
Q Consensus 443 ~~~~~p~~~~~~~g~s~~~-~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 520 (615)
...+...++.+.+|++..+ .|.++..+..+-.+..+++|++.||+|.|+++..+. +.-.+...+.... +
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~---------l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQA---------LSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH---------HHHHHHHHHHHHHHH
Confidence 3445555777789999999 999999999999999999999999999996544221 1111111111122 2
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhH---HHHHHHHHH
Q 007159 521 TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDD---VFKVAVVLY 597 (615)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~---~f~~~~~~~ 597 (615)
...+.+.-++.|.+.+... .....+...+|+++|+++.|+.+....+|.++++++++++ ...||+. ..++..+..
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 3334444455555555555 6666678889999999999999999999999999999994 4456554 444555555
Q ss_pred HHHHHHHHHHhcCC
Q 007159 598 IIGTLVWNLFATGE 611 (615)
Q Consensus 598 l~~~l~~~~~~~~~ 611 (615)
.+++++.+++.+.+
T Consensus 193 ~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 193 TFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHhCCCCc
Confidence 55566655554433
No 223
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.86 E-value=7.7e-08 Score=98.33 Aligned_cols=169 Identities=16% Similarity=0.158 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Q 007159 434 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFL 513 (615)
Q Consensus 434 ~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l 513 (615)
+...+....+..-+-+.+.+.+|+|+.+.+++.++..+.+.+.+++.|.+.||+|.|+..... .+..++..+.+
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s------~~l~~IP~~~~ 96 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILS------MLLLLIPCLGL 96 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHH------HHHHHHHHHHH
Confidence 333344444444444555577999999999999999999999999999999999999754322 12223333333
Q ss_pred HHhccccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC---hhHHH
Q 007159 514 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS---WDDVF 590 (615)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g---~~~~f 590 (615)
......+..+.++.+.++.+..++............+||+++|.+.|++. .+++|..+...++..++...+ |+.+.
T Consensus 97 ~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~ 175 (417)
T COG2223 97 AFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVA 175 (417)
T ss_pred HHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 32222232233444444444444455555666777889999999999988 999999999999998888888 89888
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 007159 591 KVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 591 ~~~~~~~l~~~l~~~~~~~ 609 (615)
.+..+..++..+++++..+
T Consensus 176 ~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 176 GIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8888888887776666543
No 224
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.3e-07 Score=90.98 Aligned_cols=134 Identities=14% Similarity=0.104 Sum_probs=106.7
Q ss_pred HHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH-HHHHHHHhhhccChHHHHHHHHHHHh
Q 007159 231 LPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS-VATVLTPVAARIGLPFLLIMRAFMGI 309 (615)
Q Consensus 231 ~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~-i~~~l~~~~~~~~~~~ll~~r~l~G~ 309 (615)
..+.+.+|+|+...+-+.+......++..++.|.++||+|++...+.+..+.. ++-.+..+.. +-=.+...+.|+
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~----lsPy~~m~~lGL 364 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF----LSPYTSMTFLGL 364 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh----ccHHHHHHHHhh
Confidence 34689999999999999999999999999999999999999977766554443 3434444432 223445667888
Q ss_pred hhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC---chHHHHH
Q 007159 310 GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG---WPSVFYS 368 (615)
Q Consensus 310 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g---w~~~f~~ 368 (615)
..+..-......++...|+++.|++.|..+...++|.++.|+++|++.+.-| |--+|++
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl 426 (459)
T KOG4686|consen 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFL 426 (459)
T ss_pred hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHH
Confidence 8888777788889999999999999999999999999999999999998654 4444443
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.80 E-value=2.8e-08 Score=103.83 Aligned_cols=165 Identities=15% Similarity=0.142 Sum_probs=142.6
Q ss_pred HHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccC
Q 007159 217 LLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG 296 (615)
Q Consensus 217 ~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~ 296 (615)
++.+.....+..++-.-.++.+..+...|........+-++.-++.+++.+|+|+-+++.+++.+..+=.+.+.... |
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n 458 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--N 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--C
Confidence 33344444455555566888988888889888888999999999999999999999999999999999888888888 8
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHH-HHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSG-MYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 297 ~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+|..+...+++|+..+..+.+..+++++..||+-+..+-++.... .++|-.+|.+++|.+.+++|-|..|.+.++.+++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999988774 4789999999999999999999999998888777
Q ss_pred HHHHHHhh
Q 007159 376 WFALWLKK 383 (615)
Q Consensus 376 ~~~~~~~~ 383 (615)
.+++....
T Consensus 539 ~l~~~~~i 546 (618)
T KOG3762|consen 539 TLALFISI 546 (618)
T ss_pred HHHHHHHh
Confidence 66655543
No 226
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.78 E-value=1.9e-07 Score=101.70 Aligned_cols=142 Identities=11% Similarity=-0.013 Sum_probs=106.0
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh---hhccCh
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---AARIGL 297 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~---~~~~~~ 297 (615)
..........+.+.+....+....+++.++..++.+++.++++++.||+|+|+.++++.++.+++.+...+ ....+.
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 33344444444555544445666777878777889999999999999999999999888776666554432 122245
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhhccc-------ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 298 ~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
+.+++..++.|++.+...+...++++|..+ .++.|..++......-+|..+|+.+.|++.+..|+
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 667777788899999999999999999965 23346688999999999999999999998775554
No 227
>PRK09669 putative symporter YagG; Provisional
Probab=98.76 E-value=1.8e-07 Score=101.05 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=94.5
Q ss_pred chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHH
Q 007159 241 STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 320 (615)
Q Consensus 241 ~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~ 320 (615)
....+.+.....++.+++.++++++.||+|+|+.+.++.++.++..+...+.+..+.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677788888999999999999999999888876665444333332225666777888999999999999999
Q ss_pred Hhhhcccc-------cchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 321 MLSKWIPV-------SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 321 ~i~~~~~~-------~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
+++|..+. +..|..++..+....+|..+|+.++|++.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998852 2236678888889999999999999998876665
No 228
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.76 E-value=6.5e-08 Score=85.66 Aligned_cols=133 Identities=14% Similarity=0.168 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHHHHhhhhhhhhhhhhh
Q 007159 467 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYS 545 (615)
Q Consensus 467 ~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 545 (615)
+...++..++.++.|++.||+++|+...... .... ............+ ..+...+.+.+.....+.....
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGL-------FIFV--LSTAMFALSSNITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHH-------HHHH--HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3456777888999999999999986543221 1111 1111111122333 3333333333333333344444
Q ss_pred hhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 546 NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 546 ~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
..+..++++++++.++.+....+|..++|.+.+.+.+..+|+..+.+.+++.+++.+......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcC
Confidence 566677799999999999999999999999999999999999999888887777766655543
No 229
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.76 E-value=2.3e-07 Score=99.72 Aligned_cols=147 Identities=18% Similarity=0.152 Sum_probs=118.1
Q ss_pred HHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhcc
Q 007159 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (615)
Q Consensus 216 ~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~ 295 (615)
.++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~ 313 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG 313 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhh
Confidence 33344444444545555554432234678888889999999999999999999999999999999999999888777634
Q ss_pred ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccc-------cchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV-------SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
+.+.+++..++.|++.+...+...++++|..+. ++.|..+|+.....-+|..+++.+.+.+.+..|+
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 678899999999999999999999999999863 3358889999999999999999998888765443
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.75 E-value=3.9e-08 Score=99.19 Aligned_cols=145 Identities=16% Similarity=0.130 Sum_probs=111.7
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhh
Q 007159 455 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQG 534 (615)
Q Consensus 455 ~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 534 (615)
++-+..++|++++...+..++.+++.|.+.||+|.+ +.+.+++..+.....++.+.+.+++.++.=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 455667899999999999999999999999999999 44445555555555555566666655555444444
Q ss_pred hhhhhhh-hhhhhhhccCc-chhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 535 SDAFSQS-GLYSNHQDIGP-RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 535 ~~~~~~~-~~~~~~~~~~~-~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
..++... ....+++.++. ++|++++|+.-.+..+|..+||+++|.++|..|+...|+++++++++..++-++..
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhee
Confidence 4444444 44445555665 45799999999999999999999999999999999999999999988877765543
No 231
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.73 E-value=7.3e-08 Score=96.04 Aligned_cols=132 Identities=9% Similarity=0.066 Sum_probs=96.5
Q ss_pred HHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccc
Q 007159 251 FFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE 330 (615)
Q Consensus 251 ~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 330 (615)
..+.-+-|.++.+.+.||+|||+.+....+++++..++...+...+. ..+..+..-++.++.+.+.+.|..|.+|..-
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~--~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNA--YTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcch--hHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 34556668889999999999999999999999999988777764343 3333333344455566778899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhhhcC
Q 007159 331 RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYS 386 (615)
Q Consensus 331 r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 386 (615)
|+...|......-+|+++.|+++ ...+ ..-..+..+.+.+.++..+...+++.+
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeeeec
Confidence 99999999999999999999998 3333 333334444555555555555554443
No 232
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.73 E-value=4e-07 Score=95.21 Aligned_cols=159 Identities=11% Similarity=0.018 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhccccHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 442 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-----VSKGLSITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 442 ~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
.....+|.+.++ .|++..+.|++... .+...+ .++.|.+.||+ ||||..+.. .............+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~------~~~~~~~~~~~l~~ 76 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVL------TQVLLLSLLLILSF 76 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHH------HHHHHHHHHHHHHc
Confidence 344567788877 69999999998644 344344 88999999998 666543211 11111111111111
Q ss_pred cc-ccchHHHHHHHHHHhhhhhhhhh-hhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC--------h
Q 007159 517 SH-VRTPAMAVLCMACSQGSDAFSQS-GLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS--------W 586 (615)
Q Consensus 517 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g--------~ 586 (615)
.. ....+.+....++.........+ ......+..++++|+.+.|+......+|..+++.+++.+.+..+ |
T Consensus 77 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 77 LVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 11 12222222222222222232223 33335566778999999999999999999999999999998877 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 007159 587 DDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 587 ~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+..|++.+++.+++.++.++..+
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988877776655444333
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.71 E-value=5.7e-07 Score=96.62 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=114.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHH----HhhhccccHHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD----TLVSKGLSITAVRKI 500 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~d----r~g~~~~~~~~~~~~ 500 (615)
++..+....+...+++.....+++.|+++ +|.+....++++.+..+...+..++.|+++| |+|||+..+...
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g--- 80 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAG--- 80 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHH---
Confidence 34455555666677777778888888866 8999999999999999999999999999999 599997654321
Q ss_pred HHHHHHHHHHHHHHHhccccc--------------h---HHHHHHH-HHHhhhhhhhhhhhhhhhhccCcchh--hHHHH
Q 007159 501 MQSIGFLGPAFFLTQLSHVRT--------------P---AMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPRYA--GVLLG 560 (615)
Q Consensus 501 ~~~~~~~~~~~~l~~~~~~~~--------------~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g 560 (615)
.....+.+..+..... . +..+..+ +..........+......+..+++++ +.+.+
T Consensus 81 -----~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 81 -----AALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred -----HHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 1111111111111111 0 1112222 22222223333333345555665543 68999
Q ss_pred HHHHHHHHHHHHHHHHhhhe--ecc-------------CChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 561 LSNTAGVLAGVFGTAATGYI--LQR-------------GSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 561 l~~~~~~lg~~igp~l~G~l--~~~-------------~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
+.+...++|..+|+.++|+. .+. .+++.+|++.+++++++.++..+..++
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 99999999999999999875 221 167888998888888877776665444
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=9.9e-07 Score=88.50 Aligned_cols=160 Identities=13% Similarity=0.097 Sum_probs=129.8
Q ss_pred hhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHHHHHHHHhhhccChHH
Q 007159 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARIGLPF 299 (615)
Q Consensus 221 ~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ 299 (615)
+..+.....+|.+..|.|+|..+.|++.++..+..+...+....+.+| -++|+..+...+++.++.+.+.+.+...++.
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~l 301 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPIL 301 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 444555667999999999999999999999999999999999999996 4678888888888888888888877433322
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhccc-ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC-chHHHHHHHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWF 377 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~ 377 (615)
. .++.|+|.|..++.+..++.+-.+ +++.++-.++.+...++=..+||.+.|++.+..| |...++.+....++..
T Consensus 302 w---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 302 W---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred H---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 2 489999999999999999998775 4556677788888888888999999999998765 9988887777766666
Q ss_pred HHHHhh
Q 007159 378 ALWLKK 383 (615)
Q Consensus 378 ~~~~~~ 383 (615)
+.-+..
T Consensus 379 i~Gl~a 384 (395)
T COG2807 379 IFGLRA 384 (395)
T ss_pred HHHhhc
Confidence 555543
No 235
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.69 E-value=8e-07 Score=89.36 Aligned_cols=156 Identities=29% Similarity=0.569 Sum_probs=124.8
Q ss_pred hhhhhHHHHhHHHHHhhcCCCc--hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccCh
Q 007159 220 NMDRVNMSIAILPMSKEFNWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL 297 (615)
Q Consensus 220 ~~~~~~~~~~~~~i~~~~g~s~--~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~ 297 (615)
..+........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+....+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 15 GLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 3555666677888888887666 48899999999999999999999999999998888888765555566666552237
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhhcccc-cchhhHHHHHHH-HHHHHHHHHhhhHhhhhcC--CCchHHHHHHHHHH
Q 007159 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV-SERSRSLAFVYS-GMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLG 373 (615)
Q Consensus 298 ~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~lG~~ig~~l~~~l~~~--~gw~~~f~~~~~~~ 373 (615)
+.+++.|++.|++.+...+...+++.+++++ ++|+...+.... ...+|..+++.+++.+... .+|++.|++.....
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 7889999999999999999999999999976 678888888888 5788889998887776654 67998776655554
Q ss_pred HH
Q 007159 374 SI 375 (615)
Q Consensus 374 ~~ 375 (615)
..
T Consensus 175 ~~ 176 (338)
T COG0477 175 LL 176 (338)
T ss_pred HH
Confidence 33
No 236
>PTZ00207 hypothetical protein; Provisional
Probab=98.68 E-value=1.7e-06 Score=95.03 Aligned_cols=163 Identities=10% Similarity=0.057 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 441 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 441 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
+.+..+.| .+++.+|++..+.+.+..+.. ...+..++.|++.||+|+|+++..+. .+..++.+..++..-.....+
T Consensus 44 y~fsv~s~-~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~--ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 44 YAFNLISG-AMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSM--TVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHH-HHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHHHHHHHHHhcccccCc
Confidence 34444445 456669999999998877643 33456667899999999997655432 222222222222100000112
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHH
Q 007159 521 TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 600 (615)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~ 600 (615)
.+.+.+..++.+.+.............+. .|++||++.|+......+|..+.+.+...+.. .++...|++.+++.++.
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~-Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSV-FPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 22333333344444333344444444544 46899999999999999999865444444433 45778888888777776
Q ss_pred HHHHHHHhc
Q 007159 601 TLVWNLFAT 609 (615)
Q Consensus 601 ~l~~~~~~~ 609 (615)
.+++..+.+
T Consensus 198 ~ll~~~~vr 206 (591)
T PTZ00207 198 GILAIVFMR 206 (591)
T ss_pred HHHHHhhee
Confidence 666555433
No 237
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.63 E-value=9.6e-08 Score=98.50 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=117.3
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHH
Q 007159 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMA 530 (615)
Q Consensus 452 ~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 530 (615)
++.+|.+....|++...+.+...+.+++.|++.||+.|++++..+...+. ++.++.++ ...++ +++.-.+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~--~Av~~~~f-------s~~Fwq~~l~R~~ 130 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT--LAVFASGF-------SNHFWQVLLCRGF 130 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH--HHHHHHHH-------HHHHHHHHHHHHH
Confidence 45589999999999999999999999999999999999987765432221 11222211 23334 4444456
Q ss_pred HHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCC-hhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 531 CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g-~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
.+.+.....+.....+.+.++.++|++++++++.+..+|..+|-+.++.+.+..+ |++.|.+.+++.++..++.+++.+
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 6666666666666667777788999999999999999999999999999998855 999999999999888888777766
Q ss_pred CCc
Q 007159 610 GER 612 (615)
Q Consensus 610 ~~k 612 (615)
+++
T Consensus 211 eP~ 213 (493)
T KOG1330|consen 211 EPE 213 (493)
T ss_pred Ccc
Confidence 543
No 238
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.62 E-value=4.2e-07 Score=97.56 Aligned_cols=152 Identities=14% Similarity=0.162 Sum_probs=117.6
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS 532 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 532 (615)
..+.++..+-+++++....|.+++.+.+|++.||+|.|+++..+. +......++.........+.++++-++.|
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~------~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISG------LISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHH------HHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 357899999999999999999999999999999999997654322 11111112222222223334455555666
Q ss_pred hhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheecc-CChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 533 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~-~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
.+.+...+.......+..|+++|++..++......+|.+++-++.|++.+. .||+.+|++.+++.++..+++.++.+.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 666666666666788889999999999999999999999999999999999 999999999999999998888777553
No 239
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.61 E-value=3.3e-07 Score=102.91 Aligned_cols=165 Identities=12% Similarity=0.076 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhc----
Q 007159 442 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS---- 517 (615)
Q Consensus 442 ~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---- 517 (615)
++....-.-+++.++++..+.|++.+.+.++.+++.++.+++.||.++++.+..+. ++..++.++.++.-+...
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~--ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC--AIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH--HHHHHHHHHHhChHHhcCCccc
Confidence 33333333455669999999999999999999999999999999999998776543 333333333322111000
Q ss_pred --------------------c--------------------ccch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhh
Q 007159 518 --------------------H--------------------VRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAG 556 (615)
Q Consensus 518 --------------------~--------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 556 (615)
. ...+ .+++.-++.+.+.....+.....+.+..++++++
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 0 0012 2334445555555555555555566677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhheeccC----------------------ChhHHHHHHHHHHHHHHHHHHHHh
Q 007159 557 VLLGLSNTAGVLAGVFGTAATGYILQRG----------------------SWDDVFKVAVVLYIIGTLVWNLFA 608 (615)
Q Consensus 557 ~~~gl~~~~~~lg~~igp~l~G~l~~~~----------------------g~~~~f~~~~~~~l~~~l~~~~~~ 608 (615)
...|+.+....+|..+|++++|++.+.+ .|+..|++.+++.++..+.++++.
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999987542 267778888877777665554443
No 240
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.60 E-value=5.8e-07 Score=94.11 Aligned_cols=181 Identities=13% Similarity=0.112 Sum_probs=130.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccccHHHH
Q 007159 423 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK----FNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAV 497 (615)
Q Consensus 423 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g----~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~-g~~~~~~~~~ 497 (615)
.+.++.++..-+.--+++|++-..+..|+...++ ++..++.-++..+....-+..+++||++||+ |+|+...
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~--- 96 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV--- 96 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH---
Confidence 4567888888899999999999999999988888 9999998888888888888899999999997 5554322
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHhhhhhhhhhhhhhhhhccCc--chhhHHHHHHHHHHHHHHHHHH
Q 007159 498 RKIMQSIGFLGPAFFLTQLSH-VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP--RYAGVLLGLSNTAGVLAGVFGT 574 (615)
Q Consensus 498 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~gl~~~~~~lg~~igp 574 (615)
+...+...+-..+.... .....+.+...++..+.+.+=+.......+..++ .+|-..++++.+..++|+.++|
T Consensus 97 ----lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 97 ----LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred ----HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 22222222222222221 1233344444444444444433333344444443 2377788899999999999999
Q ss_pred HHhhheeccCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 575 AATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 575 ~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
.+.+++.+.+||...|..+++-+.++++.+++.+|.
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 999999999999999999999999999988877654
No 241
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.59 E-value=2.6e-07 Score=92.78 Aligned_cols=116 Identities=16% Similarity=0.064 Sum_probs=88.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhh
Q 007159 458 NLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDA 537 (615)
Q Consensus 458 s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 537 (615)
+....|++-+.+++...+.+.++|.++||+|||.+ +.++.+..++..+.+....+...++..=++++.+-+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv---------ll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPV---------LLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG 136 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 44567888899999999999999999999999943 334444444555555555666444444556666655
Q ss_pred hhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 538 FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
........+.+..++++|+.+++.+++..++|..+||.++|++.+
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 555555556666778999999999999999999999999999988
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.59 E-value=3.2e-06 Score=83.85 Aligned_cols=361 Identities=12% Similarity=0.089 Sum_probs=212.0
Q ss_pred hhcCCCchhhH-HHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcc
Q 007159 235 KEFNWNSTTVG-LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 235 ~~~g~s~~~~g-~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~ 313 (615)
.+.|++..++. -+.-+..-.+.+.-.+.=.+.|-.-.|++++.-.+...+..++..+.+ +.+.+=+.-++.|...+.
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAa 111 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAA 111 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHH
Confidence 45566665543 222233334555556666788988889988877666666666666666 666677777888877543
Q ss_pred hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHH--HHHHHHHHHHHHHHHhhhcCCCCCC
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF--YSFGSLGSIWFALWLKKAYSSPKED 391 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f--~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (615)
..+..+++-...+++++.++.+...++.-.|...|..++-.++..-.+.... ++......+..++..+. |+.++..
T Consensus 112 -EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fL-P~v~rSl 189 (433)
T KOG3810|consen 112 -EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFL-PRVKRSL 189 (433)
T ss_pred -HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhC-CCCchhh
Confidence 4677788888889999999999999999999999988888877643333222 22111112222222222 2222110
Q ss_pred ccccHHHHhh-----hhcCCccc-c------ccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 007159 392 PELRAEEKRH-----ILGGSISK-E------AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK-FN 458 (615)
Q Consensus 392 ~~~~~~~~~~-----~~~~~~~~-~------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g-~s 458 (615)
-..+.+++.. ..+..... + ......++...++|.+....+-..+...+++....+......+.-. -.
T Consensus 190 ~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~ 269 (433)
T KOG3810|consen 190 YFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPA 269 (433)
T ss_pred hhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCch
Confidence 0000000000 00000000 0 0012244556677887777777777777888888887777766421 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH-hhhhh
Q 007159 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS-QGSDA 537 (615)
Q Consensus 459 ~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 537 (615)
....|..-++..+.++++.+..|.+.-.+.+.+ ..++.++.+.-+.+++.+......++..+...+. .....
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g-------~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l 342 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG-------DLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQL 342 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhh-------HHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhh
Confidence 222356666777778888888888765554442 2344444555555555666666666655554444 33334
Q ss_pred hhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccC-----------ChhHHHHHHHHHHHHHHHHHHH
Q 007159 538 FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~-----------g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
..+.+...++.....|.-|..+|+...+.-+-..+ +.-.+.|.- =|..-|++.+++.+++..+...
T Consensus 343 ~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 343 TITIATFQIARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred hhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 44455556777788899999999987665554443 444455521 1445577778888887665444
Q ss_pred Hhc
Q 007159 607 FAT 609 (615)
Q Consensus 607 ~~~ 609 (615)
..+
T Consensus 420 ~~~ 422 (433)
T KOG3810|consen 420 MCR 422 (433)
T ss_pred Hhh
Confidence 433
No 243
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.53 E-value=6.7e-07 Score=97.07 Aligned_cols=128 Identities=14% Similarity=0.144 Sum_probs=110.4
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh-hc-------cChHHHHHHHH
Q 007159 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA-AR-------IGLPFLLIMRA 305 (615)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~-~~-------~~~~~ll~~r~ 305 (615)
.+.+|+++.++|++.....++.+++....+++.+|++.|+++.++.++.+++.+..... .. .+.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35789999999999999999999999999999999999999999999998877553211 00 12334566678
Q ss_pred HHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 007159 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (615)
Q Consensus 306 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g 361 (615)
+.+++.+..+.+...++.+..|++.++..+++.....++|..+++.+++.+.++.|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88999999999999999999999999999999999999999999999999988776
No 244
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.51 E-value=3.9e-06 Score=88.64 Aligned_cols=147 Identities=15% Similarity=0.094 Sum_probs=115.9
Q ss_pred HHHHHhhhhhHHHHhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhh
Q 007159 215 AFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (615)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~ 293 (615)
..++......+.......+ ...+|.+.....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 3334444444444444443 344576777777888888888888899999999999999999999999999999988887
Q ss_pred ccChHHHHHHHHHHHhhhcchhhHHHHHhhhccccc-------chhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 007159 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS-------ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (615)
Q Consensus 294 ~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g 361 (615)
..+.+++++..++.+++.+...+...++++|..+-+ .-|...+......=+|.+++..+.|++.+..|
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 656788888899999999999999999999887532 23677888888888899999988888876555
No 245
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.48 E-value=0.00076 Score=72.72 Aligned_cols=279 Identities=10% Similarity=0.046 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhc---CCCchhhHHHHHHHHH-HHHHHHHhhHHhhhhcCCchHHHHHHHH
Q 007159 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF---NWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVLGFGVIW 281 (615)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---g~s~~~~g~i~s~~~l-~~~l~~~~~G~l~Dr~Grk~~l~~~~~l 281 (615)
++.++.+.+.+|+..+..+..-. +.+.+ ...++.+.++=....+ ..++...+..++++++++.+++-+....
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRD----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 44455555555555444443322 22222 1245556666554444 3445577789999999999987766655
Q ss_pred HHHHHHHHHhhh-------ccC----------------------hHHHHHHHHHHHhhhcchhh-HHHHHhhhcccccch
Q 007159 282 WSVATVLTPVAA-------RIG----------------------LPFLLIMRAFMGIGEGVAMP-AMNNMLSKWIPVSER 331 (615)
Q Consensus 282 ~~i~~~l~~~~~-------~~~----------------------~~~ll~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 331 (615)
+.....++++.- +.+ .|...+..++.-+-.+.... .-..+..+.++.+|.
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 555554444321 000 11222222333333334333 468889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhhhhc---------CCCchHHHHHHH----HHHHHHHHHHHhhhcCCCCCCccccHHH
Q 007159 332 SRSLAFVYSGMYLGSVTGLAVSPILIQ---------KFGWPSVFYSFG----SLGSIWFALWLKKAYSSPKEDPELRAEE 398 (615)
Q Consensus 332 ~~~~~~~~~~~~lG~~ig~~l~~~l~~---------~~gw~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (615)
.+..+++..+.++|.++++.+..++.+ .-.|...+..+. +.+.+...+ .....+...+++......
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~-~~~~~~~vl~~~~~~~~~ 257 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILL-YRYMNKNVLTDPRFYPSA 257 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHccCccccchhh
Confidence 999999999999999999998888777 123543332211 111111212 222221111111110000
Q ss_pred HhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH---HHHHHHHHHHHHHH
Q 007159 399 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE---SGLFCVLPWLTMAV 475 (615)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~---~g~~~~~~~i~~~i 475 (615)
.+ +.+++++..-...++.++++|.+..+++...+++.....+...+-..+++.+--+.+. .|-+....++..++
T Consensus 258 ~~---~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii 334 (491)
T PF03219_consen 258 KK---KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTII 334 (491)
T ss_pred hc---ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHH
Confidence 00 0000011111235677888888888888888888887777776666666654322222 24444555666666
Q ss_pred HHHHHHHHHHHhhhccc
Q 007159 476 FANMGGWIADTLVSKGL 492 (615)
Q Consensus 476 g~~l~g~l~dr~g~~~~ 492 (615)
..++++.+.+|+|.+..
T Consensus 335 ~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 335 MMFLSSNIIRRFGWRTA 351 (491)
T ss_pred HHHHHHHHHHHhhHHHH
Confidence 66788888888887643
No 246
>PRK11462 putative transporter; Provisional
Probab=98.47 E-value=8.3e-06 Score=88.45 Aligned_cols=123 Identities=12% Similarity=0.060 Sum_probs=85.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHH
Q 007159 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 319 (615)
Q Consensus 240 s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~ 319 (615)
++...+.+.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+..+...+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677788888999999999999999999988775555444433333333322233344555667888777777777
Q ss_pred HHhhhccc-------ccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCc
Q 007159 320 NMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (615)
Q Consensus 320 ~~i~~~~~-------~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw 362 (615)
++++|..+ +++.|..++......-+|..+|+.++|++.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78888775 23335556777788889999999998887765454
No 247
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.45 E-value=7e-06 Score=83.73 Aligned_cols=160 Identities=14% Similarity=0.207 Sum_probs=128.2
Q ss_pred HHHHHHHhhhhhHHHHhHHHHHhh-cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 007159 213 FSAFLLCNMDRVNMSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~-~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
.++.|+...........++.+..+ .|.+..+.....+.+..+.++|.++..++..|+...|.+....++..+.++..++
T Consensus 242 vl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l 321 (422)
T COG0738 242 VLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVAL 321 (422)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666667777777666 8889999999999999999999999999999999999998888777777777777
Q ss_pred hhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHH
Q 007159 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (615)
Q Consensus 292 ~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~ 371 (615)
.+ +. +-+.+-++.|+..+..+|...+...+..+ +....-|..-....+|+++-|.+-|++.+..|-...+.+...
T Consensus 322 ~~--g~-v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pl 396 (422)
T COG0738 322 IG--GV-VALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPL 396 (422)
T ss_pred hc--Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 76 43 35556678899999999999999999997 344445555566779999999999999999998888876666
Q ss_pred HHHHHH
Q 007159 372 LGSIWF 377 (615)
Q Consensus 372 ~~~~~~ 377 (615)
++.+..
T Consensus 397 lc~lyV 402 (422)
T COG0738 397 LCYLYV 402 (422)
T ss_pred HHHHHH
Confidence 665555
No 248
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.41 E-value=2.4e-05 Score=85.69 Aligned_cols=153 Identities=10% Similarity=0.050 Sum_probs=97.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 525 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 525 (615)
.++... ..+|-+ ....++.+...++..+..++.|+++|.+|||...+.+ .++..+........++...+
T Consensus 66 ~l~~I~-~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g---------~~l~vvG~Iv~atA~~~~~~ 134 (599)
T PF06609_consen 66 ILPYIN-ADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIG---------SLLGVVGSIVCATAQNMNTF 134 (599)
T ss_pred HHHHHH-HhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH---------HHHHHhHHHHhhcCCcHHHH
Confidence 344434 446654 5566777888888999999999999999999654432 22222222222233444444
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 526 VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
++...+.+...+..........+..+.+.|+...++.....-+...++|.++..+....+|++.|++..++..++++...
T Consensus 135 iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 44443333333443333444566677788988887776665556667888887777778999999999888777766555
Q ss_pred HHhc
Q 007159 606 LFAT 609 (615)
Q Consensus 606 ~~~~ 609 (615)
++.+
T Consensus 215 ~fY~ 218 (599)
T PF06609_consen 215 FFYF 218 (599)
T ss_pred HHhC
Confidence 4433
No 249
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.26 E-value=0.01 Score=62.59 Aligned_cols=285 Identities=9% Similarity=0.006 Sum_probs=158.8
Q ss_pred cccCchhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcC---CCchhhHHHHHHHHH-HHHHHHHhhHHhhhhcCCchH
Q 007159 199 WEQFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFN---WNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPV 274 (615)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g---~s~~~~g~i~s~~~l-~~~l~~~~~G~l~Dr~Grk~~ 274 (615)
|+..+..+..++.+.+.+++..+..+.. -.+.+.+. ..+..+.++-+...+ +.++..++.+++.+++.+.++
T Consensus 19 wpi~r~E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~v 94 (509)
T COG3202 19 WPIRRYELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKV 94 (509)
T ss_pred eeccHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHH
Confidence 3333444555666666555555544433 33444443 346677888887777 667788899999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhc-------cC-----------------------hHHHHHHHHHHHhhhcchhh-HHHHHhh
Q 007159 275 LGFGVIWWSVATVLTPVAAR-------IG-----------------------LPFLLIMRAFMGIGEGVAMP-AMNNMLS 323 (615)
Q Consensus 275 l~~~~~l~~i~~~l~~~~~~-------~~-----------------------~~~ll~~r~l~G~~~~~~~~-~~~~~i~ 323 (615)
+-+....+....+++++.-. .+ -|...+..++.-+-.+.... .-.....
T Consensus 95 F~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN 174 (509)
T COG3202 95 FYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777666666666554321 00 12223333333333333333 5566778
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCC----------chHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 007159 324 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG----------WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE 393 (615)
Q Consensus 324 ~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~g----------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (615)
|..+.+|-.+.++++..+.+++..++..+..++..+.. .+..+.+.+..+.+...+..+..+...+.+..
T Consensus 175 eitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f 254 (509)
T COG3202 175 EITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLF 254 (509)
T ss_pred HhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Confidence 88888899999999999999999999888888776321 12223333333333333222222222221111
Q ss_pred ccHHHHhhhhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH---HHHHHHHHH
Q 007159 394 LRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE---SGLFCVLPW 470 (615)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~---~g~~~~~~~ 470 (615)
.....+++ .....+..-...++.+.+.|-++.+.+...+++.+...+....-.-.++.+--..+. .|.+....+
T Consensus 255 ~~~~~~kk---~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tg 331 (509)
T COG3202 255 YLRAKKKK---KKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTG 331 (509)
T ss_pred hHHHhccc---ccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHH
Confidence 10000000 000000111235677788888888888888887777766654444444333222222 233334444
Q ss_pred HH-HHHHHHHHHHHHHHhhhc
Q 007159 471 LT-MAVFANMGGWIADTLVSK 490 (615)
Q Consensus 471 i~-~~ig~~l~g~l~dr~g~~ 490 (615)
+. .++...+++.+.+|.|..
T Consensus 332 vv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 332 VVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHhhhHHHHHHhhHH
Confidence 44 344555677888887765
No 250
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.23 E-value=7.5e-06 Score=65.07 Aligned_cols=75 Identities=13% Similarity=0.222 Sum_probs=70.4
Q ss_pred HhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhh
Q 007159 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (615)
Q Consensus 219 ~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~ 293 (615)
.+.++..+++.+|.+.++.++|..+.|++.+..++||.+|.+...++.++..+++.+..++++..+..+.+++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 357788899999999999999999999999999999999999999999998888999999999999999999887
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.23 E-value=6.1e-05 Score=68.05 Aligned_cols=109 Identities=11% Similarity=0.136 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhc
Q 007159 246 LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 325 (615)
Q Consensus 246 ~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~ 325 (615)
.-.++.+....+..++.+.+.+++|.|+.++++.+++.+-.... +.+ +.+.++..-++.|++.+..+++...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 44556666677778888889999999999999999988665544 333 577889999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhhHhhhh
Q 007159 326 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (615)
Q Consensus 326 ~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~ 357 (615)
.+++++++..+++......+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888877765543
No 252
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.20 E-value=1.9e-08 Score=108.79 Aligned_cols=162 Identities=13% Similarity=0.085 Sum_probs=105.5
Q ss_pred hHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHH----hhhcc----
Q 007159 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP----VAARI---- 295 (615)
Q Consensus 224 ~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~----~~~~~---- 295 (615)
.......+.+.+..+.+.. -+......+...++.++...+.||+|||++++.+.++.+++.+..+ ...+.
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344456677777777766 1222233344556666777999999999999999888887776654 11111
Q ss_pred ChHHHHHHHHHHHhhhc-chhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHH
Q 007159 296 GLPFLLIMRAFMGIGEG-VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (615)
Q Consensus 296 ~~~~ll~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 374 (615)
++. .++.-.+...+.+ ...+....+.+|.+|.+.|.++.++......++.++++.+...+.+..+-...+++.+++.+
T Consensus 348 ~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCL 426 (451)
T ss_pred ccc-cceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 121 2222222222222 33456668889999999999999999999999999999988888877663445555566656
Q ss_pred HHHHHHHhhhcCCC
Q 007159 375 IWFALWLKKAYSSP 388 (615)
Q Consensus 375 ~~~~~~~~~~~~~~ 388 (615)
+..++.+...|+.+
T Consensus 427 i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 427 IAIIFVYFFLPETK 440 (451)
T ss_pred HHHhheeEEEeeCC
Confidence 55555555555543
No 253
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.19 E-value=7.9e-05 Score=76.81 Aligned_cols=154 Identities=14% Similarity=0.114 Sum_probs=122.3
Q ss_pred HhHHHH-HhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh-hcCCchHHHHHHHHHHHHHHHHHhhhc-cChHHHHHHH
Q 007159 228 IAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-KFGGKPVLGFGVIWWSVATVLTPVAAR-IGLPFLLIMR 304 (615)
Q Consensus 228 ~~~~~i-~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D-r~Grk~~l~~~~~l~~i~~~l~~~~~~-~~~~~ll~~r 304 (615)
..+.++ -+-||++..+..-+.+....+..++-...|++.. |.++++...+++.+..++..+..++.. .+.+.+...-
T Consensus 229 ~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~ 308 (403)
T PF03209_consen 229 VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGV 308 (403)
T ss_pred HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 344444 5678999999999999999999999999999887 677888888888888877766554431 2457788889
Q ss_pred HHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC----------CCchHHHHHHHHHHH
Q 007159 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK----------FGWPSVFYSFGSLGS 374 (615)
Q Consensus 305 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~----------~gw~~~f~~~~~~~~ 374 (615)
++.|++.|.+.....+.+.+...+++.|..+|.+.....++..+|..++|.+.+. .+|..+|.+-+++.+
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998887652 235556666555555
Q ss_pred HHHHHHH
Q 007159 375 IWFALWL 381 (615)
Q Consensus 375 ~~~~~~~ 381 (615)
+...+..
T Consensus 389 ~a~~ll~ 395 (403)
T PF03209_consen 389 AALVLLG 395 (403)
T ss_pred HHHHHHH
Confidence 4444443
No 254
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=3.2e-05 Score=83.45 Aligned_cols=147 Identities=14% Similarity=0.123 Sum_probs=108.8
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS 532 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 532 (615)
+..++...+.+...+++.++.+++.+.++.+.||+...+ .+...+++...+.++.....+.+.+++.-++.+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~--------~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK--------GLSVSGILWGLFGFLTAAVHSFPGLIALRFLLG 145 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH--------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 446677788999999999999999999999999998432 222222222222222222334445555566666
Q ss_pred hhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhee------ccCChhHHHHHHHHHHHHHHHHHHH
Q 007159 533 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL------QRGSWDDVFKVAVVLYIIGTLVWNL 606 (615)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~------~~~g~~~~f~~~~~~~l~~~l~~~~ 606 (615)
.+.....+...........++++|..+|+.++...+|.++|++++..+. ...||++.|++-+++.++..++.++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 6666677777777888899999999999999999999999999998864 3479999999999888887766544
Q ss_pred H
Q 007159 607 F 607 (615)
Q Consensus 607 ~ 607 (615)
.
T Consensus 226 ~ 226 (495)
T KOG2533|consen 226 F 226 (495)
T ss_pred E
Confidence 4
No 255
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.08 E-value=2.5e-05 Score=61.55 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=59.1
Q ss_pred HHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH
Q 007159 214 SAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (615)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~ 282 (615)
..+++.+.....+.|+++.+.++.|+++.++|++.++..+...++++++|.++||+++++.++....++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 344555566677888999999999999999999999999999999999999999999988877665543
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.08 E-value=3.5e-05 Score=85.07 Aligned_cols=142 Identities=17% Similarity=0.123 Sum_probs=105.4
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccch-HHHHHHHHHH
Q 007159 454 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACS 532 (615)
Q Consensus 454 ~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~ 532 (615)
..+.+.....+..+++.++..+|.++.|.++||+|||+++..+ +++..++-......++. .+.+.-++.+
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~---------~~~~~i~~~~~a~a~~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVS---------LLLFIIFGILTAFAPNYWMFLIFRFLSG 182 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHH---------HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3566777888888999999999999999999999999655432 22222222222233444 4445555556
Q ss_pred hhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 533 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
.+..+..........+..++++|+.+..+ ......++.+++++++++.. +|+..+++..+..++.++++++.
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLP 254 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHcc
Confidence 66666666666677888999999999999 88889999999999999987 89999999888888777664443
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.06 E-value=0.0011 Score=67.45 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=88.4
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHh
Q 007159 454 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQ 533 (615)
Q Consensus 454 ~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 533 (615)
.+|++..+++.++........+...+.|.++||+|||+.-+ +-++......+...... ...+++.=++++
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl---------~~cily~~scl~k~~~~-~~~L~~GRvlgG 132 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACL---------LFCILYSLSCLTKHSSN-YPVLLLGRVLGG 132 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHH---------HHHHHHHHHHHHHhccc-cHHHHHHHHHHH
Confidence 48999999999999999999999999999999999995321 11222222222233333 344443333333
Q ss_pred hhhhhhhhhhhh------hhhccCcchhhHHHHHHH-HHHHHHHHHHHHHhhheeccC--ChhHHHHHHHHHHHHHHHHH
Q 007159 534 GSDAFSQSGLYS------NHQDIGPRYAGVLLGLSN-TAGVLAGVFGTAATGYILQRG--SWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 534 ~~~~~~~~~~~~------~~~~~~~~~~g~~~gl~~-~~~~lg~~igp~l~G~l~~~~--g~~~~f~~~~~~~l~~~l~~ 604 (615)
..........-. ..+..+++..+..++... ....+-.+++..++-++.+.. |...+|....++++++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 333333332221 123345566677666655 334455566666666776654 44778888888888777765
Q ss_pred HHHhc
Q 007159 605 NLFAT 609 (615)
Q Consensus 605 ~~~~~ 609 (615)
....+
T Consensus 213 ~~~W~ 217 (354)
T PF05631_consen 213 LKTWP 217 (354)
T ss_pred Hhccc
Confidence 54433
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.03 E-value=6.7e-06 Score=84.88 Aligned_cols=179 Identities=9% Similarity=-0.020 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHH----HHHHHH-----HHHHHHHHhhHHhhhhcCCchHHHH
Q 007159 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGL----IQSSFF-----WGYLLTQIVGGIWADKFGGKPVLGF 277 (615)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~----i~s~~~-----l~~~l~~~~~G~l~Dr~Grk~~l~~ 277 (615)
+.++..+...|+.-...+........+.+..|+.+..... -.+... .+++.+-.+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4555556666665555555556666788877776655443 111111 1122244455678999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc--ChHHHHHHHHHHH-hhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 278 GVIWWSVATVLTPVAARI--GLPFLLIMRAFMG-IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 278 ~~~l~~i~~~l~~~~~~~--~~~~ll~~r~l~G-~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
+.+++.+..+..+...+. +-..++++..+.. ++.-........+-+|.+|.+-|+...|+..+.+-+|.++|.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 999999998887766531 1111222222222 2222333455567789999999999999999999999999999999
Q ss_pred hhhc-----CCCchHHHHHHHHHHHHHHHHHHhhhc
Q 007159 355 ILIQ-----KFGWPSVFYSFGSLGSIWFALWLKKAY 385 (615)
Q Consensus 355 ~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~~~~ 385 (615)
++.+ ..+.+++|++++++.++..++.+...+
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeec
Confidence 9988 788999999999888877776666553
No 259
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.02 E-value=0.00014 Score=80.12 Aligned_cols=180 Identities=16% Similarity=0.101 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~ 287 (615)
.++.+.+..+....+......+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.+
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 334444455555555556666778888888876543 4555556666777777779999999999999999999999988
Q ss_pred HHHhhhcc-----------ChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 288 LTPVAARI-----------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 288 l~~~~~~~-----------~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
+++..... .+..+....+..........+....+.+|.+|.+-|+++.++......+...+-......+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 76644211 1222222223333333334466667889999999999999988887766665544444445
Q ss_pred hcCCCchHHHHHHHHHHHHHHH-HHHhhhcCCC
Q 007159 357 IQKFGWPSVFYSFGSLGSIWFA-LWLKKAYSSP 388 (615)
Q Consensus 357 ~~~~gw~~~f~~~~~~~~~~~~-~~~~~~~~~~ 388 (615)
.+..++...|...+.+..+... ..+...++.+
T Consensus 455 ~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 455 TEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 4444445566666655555555 4444444443
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.01 E-value=0.0002 Score=70.16 Aligned_cols=159 Identities=9% Similarity=0.049 Sum_probs=90.7
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHH
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 525 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 525 (615)
.+..-+++.+|++..+...+-....++..+| ++.|.+.|+++.+.....+. ....++........-........+.+
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~--~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGA--VLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHH--HHHHHHHHHHHHHHhCccCccchHHH
Confidence 3444566779999999999988888888775 88899999999885443332 11122221111111111111222333
Q ss_pred HHHHHHHhhhhhh-hhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHH
Q 007159 526 VLCMACSQGSDAF-SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 604 (615)
Q Consensus 526 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~ 604 (615)
.....+++..... .........+.+ |++||++.|+.-....+++.+-..+...+.+...-...+.......+++++..
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~ 178 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAM 178 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHh
Confidence 3333333333222 233344445555 67899999999999999999888888777765322333333333333334343
Q ss_pred HHHh
Q 007159 605 NLFA 608 (615)
Q Consensus 605 ~~~~ 608 (615)
.+++
T Consensus 179 ~~vr 182 (250)
T PF06813_consen 179 FFVR 182 (250)
T ss_pred hhee
Confidence 4433
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.95 E-value=0.0058 Score=67.41 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=119.3
Q ss_pred HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhc-CCchHHHHHHHHHHHHHHHHHhhhcc----------
Q 007159 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARI---------- 295 (615)
Q Consensus 227 ~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~-Grk~~l~~~~~l~~i~~~l~~~~~~~---------- 295 (615)
...+..+..+++.+...+.-....+.-...+.++.++.++|-| ||-+++.++.++..++.++..+....
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4556677888888888888888888888999999999999975 88899999998888886554432210
Q ss_pred ----------C---hHHHHHHHHHHHhhhcchhhHHHHHhhhccc---ccc-h--hhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 296 ----------G---LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP---VSE-R--SRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 296 ----------~---~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~-r--~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
+ ...+....-+..+|.|..-+...++-+|-++ +++ + ...+.++....++|..++..+..++
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 0 1245666677788999999999999999887 222 2 3667888889999999999888888
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHH
Q 007159 357 IQKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 357 ~~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
-++.+|.+.|.+..+..++..++++
T Consensus 218 q~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhcccceeeccHHHHHHHHHHHHHH
Confidence 7889999999877766655555443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.90 E-value=0.0028 Score=66.83 Aligned_cols=365 Identities=12% Similarity=0.054 Sum_probs=176.7
Q ss_pred HHHHHHHHHhhhhhHHHHhHHHHHhh--cCCCchhhHHHHHHHHHHHHHHHHhhHHhhh-----hcCCchHHHH-HHHHH
Q 007159 211 LCFSAFLLCNMDRVNMSIAILPMSKE--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-----KFGGKPVLGF-GVIWW 282 (615)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D-----r~Grk~~l~~-~~~l~ 282 (615)
++.+.+++.+.-.......+|.+.++ .+.|.++.|... +....+- .-++|.++.| |+||||..++ ...+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 44555667766655544578888887 677887776532 2222221 2344555555 7899886554 33333
Q ss_pred HHHHHHHHhhh---------------c-------cChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHH
Q 007159 283 SVATVLTPVAA---------------R-------IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS 340 (615)
Q Consensus 283 ~i~~~l~~~~~---------------~-------~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 340 (615)
++..+..+... + .+...+....++.=+..+.-..+...+.-.+..+++++.+..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33333322211 0 0011122333333444455556667777777778888877777777
Q ss_pred HHHHHHHHHhhhHhhhhc-----C--------CCc---hHHHHHHHHHHHHHHHHHHhhhcCCCCCCc--cccH----HH
Q 007159 341 GMYLGSVTGLAVSPILIQ-----K--------FGW---PSVFYSFGSLGSIWFALWLKKAYSSPKEDP--ELRA----EE 398 (615)
Q Consensus 341 ~~~lG~~ig~~l~~~l~~-----~--------~gw---~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~ 398 (615)
+.++|..++-.+.-.+-+ . .|. ..-..+.+.+.++..++..+..++.+..+. +.+. +.
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 777777776555433321 0 111 111123344444444444444444332111 0000 00
Q ss_pred -Hhhh---hcCCc--cccc-----cccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHH
Q 007159 399 -KRHI---LGGSI--SKEA-----VSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCV 467 (615)
Q Consensus 399 -~~~~---~~~~~--~~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~ 467 (615)
.++. .++.. ..+. ..-..+..+++-|.+..+.+..+..-.++..-......-+.+ .|++.+..+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0000 00000 0000 001223345667777777777777777766666666666666 6999999887655
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-c-------------------HHH----HHHHHHHH-HHHHHHHH--HHHhccc-
Q 007159 468 LPWLTMAVFANMGGWIADTLVSKGL-S-------------------ITA----VRKIMQSI-GFLGPAFF--LTQLSHV- 519 (615)
Q Consensus 468 ~~~i~~~ig~~l~g~l~dr~g~~~~-~-------------------~~~----~~~~~~~~-~~~~~~~~--l~~~~~~- 519 (615)
+..-. .++.|+++.|+.+.+. + +.+ ++..+... +=+..++. .....++
T Consensus 321 i~~P~----qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~ 396 (544)
T PF13000_consen 321 IDFPF----QIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPS 396 (544)
T ss_pred HhhhH----HHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCC
Confidence 44333 4444444444432211 0 000 01111111 10111110 1111111
Q ss_pred --cch--H--HHHHHHHHHhhhhhhhhhhhhh-hhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec
Q 007159 520 --RTP--A--MAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 582 (615)
Q Consensus 520 --~~~--~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~ 582 (615)
... + ++++.-++..+.......+..+ -.+..+|..-|+.+.+.|++.++|+---..+.=+++|
T Consensus 397 ~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 397 DGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 111 1 1222222233333333333333 3445678999999999999999999877766656655
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.76 E-value=0.0037 Score=64.77 Aligned_cols=116 Identities=12% Similarity=0.016 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHH----HHHHHHhhHHhhhhcCCchHHHHHHHHHH
Q 007159 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWG----YLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (615)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~----~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~ 283 (615)
+.+.+++..+-....+..+..+.+.+.+.+-.... .-.....+.+. ..+....-..+.-|.. .++.....+...
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~-~~~~~~l~~~~i 96 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR-TRVGYLLSLIAI 96 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 33444444444456666666777777766643333 22233333333 3334444444444421 111111111111
Q ss_pred HHHHHHHhhh-------ccChHHHHHHHHHHHhhhcchhhHHHHHhhhc
Q 007159 284 VATVLTPVAA-------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 325 (615)
Q Consensus 284 i~~~l~~~~~-------~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~ 325 (615)
+..+.+.++. ...+...++.-++.+++.+..........++.
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 1111122221 12345566777788888888888888877765
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.75 E-value=0.00079 Score=75.52 Aligned_cols=163 Identities=13% Similarity=0.060 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHHHHHhc-
Q 007159 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIMQSIGFLGPAFFLTQLS- 517 (615)
Q Consensus 440 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 517 (615)
++++...+..|+.+.+|++...+..++..+....-+..+++|+++|++ |+++.+..+. ++..++. .++...
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~--ii~~lG~-----~llai~a 75 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLS--IVYVVGH-----ALLSFGA 75 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHHHH-----HHHHhcc
Confidence 455667777888888999999988888888888888889999999986 4443322111 1111111 111111
Q ss_pred ccc------chHHHHHHHHHHhhhhhhhhhhhhhhhhccCc---chhhHHHHHHHHHHHHHHHHHHHHhhheecc-----
Q 007159 518 HVR------TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP---RYAGVLLGLSNTAGVLAGVFGTAATGYILQR----- 583 (615)
Q Consensus 518 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~----- 583 (615)
.+. ....++.+.++.++.+++-+.......+...+ +.+-..+.++....++|+.+++++.+++.+.
T Consensus 76 ~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg 155 (654)
T TIGR00926 76 IPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFG 155 (654)
T ss_pred CcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 110 11122333333333333333333333333333 3477888899999999999999999998743
Q ss_pred --CChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 584 --GSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 584 --~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
.+|..+|.+.+++++++++++...++
T Consensus 156 ~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 156 CQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 26999999999999988887765543
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.69 E-value=0.00031 Score=55.32 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007159 429 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (615)
Q Consensus 429 ~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~ 493 (615)
+-...++...+...+..++|.|+++ .|+++.++|.+.++..+...++.+++|+++||.++++..
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 4455677777888899999999998 799999999999999999999999999999999998643
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.63 E-value=0.0093 Score=63.85 Aligned_cols=98 Identities=13% Similarity=0.015 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHH-Hhh----hc-cChHHHHHHHHHHHhhhcchhhHHHHHhh
Q 007159 250 SFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT-PVA----AR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLS 323 (615)
Q Consensus 250 ~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~-~~~----~~-~~~~~ll~~r~l~G~~~~~~~~~~~~~i~ 323 (615)
...+...+..+..-.+..|+..|.=+..++++..+..++. .+. +. ..++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3444444555555555566664333333433222222221 111 11 13556677778889999888888888877
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhhh
Q 007159 324 KWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (615)
Q Consensus 324 ~~~~~~~r~~~~~~~~~~~~lG~~ig~~l 352 (615)
. +|++ .+..+..+.+++++++.++
T Consensus 133 ~-fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 V-FPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred c-CCHH----HHHHHHhcchhHHHHHHHH
Confidence 4 4432 4455555555655555443
No 267
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.43 E-value=0.001 Score=71.35 Aligned_cols=124 Identities=15% Similarity=0.220 Sum_probs=106.9
Q ss_pred HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhH-HhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhh
Q 007159 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGG-IWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIG 310 (615)
Q Consensus 232 ~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G-~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~ 310 (615)
.+...++++..+.+...+.......+++++.. .+...+|-|+++..|++...+..+..+++. +.|++....++.++.
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVALA 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHhh
Confidence 35667899999999999999999999888887 566778999999999999999999999998 566677777665555
Q ss_pred hcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc
Q 007159 311 EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (615)
Q Consensus 311 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~ 358 (615)
....|...+.++.+.+++++|+++++......+..+++|.+-+.+..
T Consensus 345 -~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 -GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred -cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 66779999999999999999999999999999999999999887654
No 268
>PRK03612 spermidine synthase; Provisional
Probab=97.43 E-value=0.0097 Score=65.23 Aligned_cols=168 Identities=13% Similarity=0.050 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHH
Q 007159 432 SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAF 511 (615)
Q Consensus 432 ~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 511 (615)
..++..++...+...+.-.+...+|-+....+.+.+.+.++..+|+.+++++.++..++. .... ..+..++.+...+
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e--~~i~l~~~~~~~l 98 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVE--LLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHH--HHHHHHHHHHHHH
Confidence 334444444455555555566667888888999999999999999988887764432221 1100 0010111111111
Q ss_pred HHHHhccccch-HHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec-cCChhHH
Q 007159 512 FLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDV 589 (615)
Q Consensus 512 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~-~~g~~~~ 589 (615)
........... .......+......+...+....+......+..|...|-...+..+|+.+|+++.|++.- ..|....
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t 178 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRT 178 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence 11111111111 111111222223333333433333333333456778888999999999999999998765 5776655
Q ss_pred HHHHHHHHHHHHH
Q 007159 590 FKVAVVLYIIGTL 602 (615)
Q Consensus 590 f~~~~~~~l~~~l 602 (615)
.++.+++.+++.+
T Consensus 179 ~~~~a~l~~~~a~ 191 (521)
T PRK03612 179 AALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444443
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.42 E-value=0.001 Score=70.00 Aligned_cols=111 Identities=20% Similarity=0.290 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcc-------ChHHHHHHHHHHHhhhcchhhHHHHHhhhccccc---chhhHHHHHHHHH
Q 007159 273 PVLGFGVIWWSVATVLTPVAARI-------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS---ERSRSLAFVYSGM 342 (615)
Q Consensus 273 ~~l~~~~~l~~i~~~l~~~~~~~-------~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 342 (615)
+.++++.+++.+|.+++.++... +.+.++++.++.++|.|..-|...++.+|-++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888889988885544321 1256888899999999999999999999999765 4567788899999
Q ss_pred HHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 343 YLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 343 ~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
++|..+++.+.+++.++.||.+.|.+.++..++..+.++..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998887777666655543
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.26 E-value=0.0043 Score=60.08 Aligned_cols=239 Identities=15% Similarity=0.099 Sum_probs=109.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhHhhhhc-------CCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccHHHHhh
Q 007159 329 SERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 401 (615)
Q Consensus 329 ~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (615)
++|+....+...+..+|.++..+.. +.. .-.|++++.+.+++.++.+++....-.+-....+. +++++.+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF--~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~~ 78 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPF--LISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKEN 78 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhH--HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccccc
Confidence 4555555555666777776654332 222 23599999888888777666665553332111111 0110000
Q ss_pred hhcCCccccccccccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh-------------hHHHHHHHH
Q 007159 402 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNL-------------TESGLFCVL 468 (615)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~-------------~~~g~~~~~ 468 (615)
..........+++|++..|...+.+...... .++.+.+.+.......++ ........+
T Consensus 79 -------~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~ 149 (267)
T PF07672_consen 79 -------STLSKKPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQIL 149 (267)
T ss_pred -------ccccccchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHH
Confidence 0001113567788888888776654432211 111111222221111111 112233334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHH-Hhccccc--h-HHHHHHHHHHhhhhhhhhhhhh
Q 007159 469 PWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT-QLSHVRT--P-AMAVLCMACSQGSDAFSQSGLY 544 (615)
Q Consensus 469 ~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 544 (615)
+..+..+|.+..|.+.+..-+||..+... +.+.+.+.+.+..+. .....+. . .+.+..++.+.+..+......+
T Consensus 150 fv~g~~~G~~~ig~~nkt~~kRk~fi~~~--~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~ 227 (267)
T PF07672_consen 150 FVAGYFLGPFTIGLWNKTNYKRKPFIHFI--ISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILN 227 (267)
T ss_pred HHHHHhhhceeeccchhhhhhhhhHHHHH--HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 44445566566666665544444433221 111111111111111 1111121 1 2223333333344344433333
Q ss_pred hhh--hccCcchhhHHHHHHHHHHHHHHHHHHHHhhhee
Q 007159 545 SNH--QDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 581 (615)
Q Consensus 545 ~~~--~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~ 581 (615)
.-. .+..|++.|...|+.-.++++.-.+.-.+...+.
T Consensus 228 lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~ 266 (267)
T PF07672_consen 228 LPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIA 266 (267)
T ss_pred ChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 322 2356788888888887777777777666665544
No 271
>PRK03612 spermidine synthase; Provisional
Probab=97.22 E-value=0.017 Score=63.41 Aligned_cols=156 Identities=14% Similarity=0.172 Sum_probs=91.5
Q ss_pred HhhhhhHHHHhHHH-HHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHH---HHHHHHHhhhc
Q 007159 219 CNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS---VATVLTPVAAR 294 (615)
Q Consensus 219 ~~~~~~~~~~~~~~-i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~---i~~~l~~~~~~ 294 (615)
.++....+-..... +..-+|.+....+.+.+++.++..+|..+++++.++.-++.. .+-+.+.. ++..+......
T Consensus 26 sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~ 104 (521)
T PRK03612 26 CAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFA 104 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334433333 445678888999999999999999999998887643222221 11111111 11111111110
Q ss_pred c--C-hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhc-CCCchHHHHHHH
Q 007159 295 I--G-LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFG 370 (615)
Q Consensus 295 ~--~-~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~-~~gw~~~f~~~~ 370 (615)
. . ...++...++.++..|+..|....+..+.. .++-+...|.......+|.++|.++.+++.- .+|-....++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a 183 (521)
T PRK03612 105 FQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTG 183 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 0 1 112334445667888888888777766543 2345677888888999999999999887654 677554544444
Q ss_pred HHHHHH
Q 007159 371 SLGSIW 376 (615)
Q Consensus 371 ~~~~~~ 376 (615)
.+.+++
T Consensus 184 ~l~~~~ 189 (521)
T PRK03612 184 SLNLLA 189 (521)
T ss_pred HHHHHH
Confidence 444333
No 272
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.20 E-value=0.005 Score=65.66 Aligned_cols=181 Identities=15% Similarity=0.052 Sum_probs=101.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-ccccHHHHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQ 502 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~-~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~-~~~~~~~~~~~~~ 502 (615)
.++...+..++...-...+.+-.-.|+++ ..+-+....|++.+...++.++.+++.|++..|.+. |+.++.+. ++.
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~--ii~ 112 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF--LIA 112 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH--HHH
Confidence 34555555555555555555545556655 246677778999999999999999999999999885 44443221 222
Q ss_pred HHHHHHHHHHHHHhcccc-chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHh----
Q 007159 503 SIGFLGPAFFLTQLSHVR-TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT---- 577 (615)
Q Consensus 503 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~---- 577 (615)
.++-++ .+.+...++ ..++++.+-++.+.+.+.....-........+++|.++++..+....+|..+||.+.
T Consensus 113 ~~g~ll---Y~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 113 IIGNLL---YLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHH---HHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 222222 211111222 333333333333333222222222233333456677777776666666666666553
Q ss_pred hheecc---------CChhHHHHHHHHHHHHHHHHHHHHhcC
Q 007159 578 GYILQR---------GSWDDVFKVAVVLYIIGTLVWNLFATG 610 (615)
Q Consensus 578 G~l~~~---------~g~~~~f~~~~~~~l~~~l~~~~~~~~ 610 (615)
|...+. .-|..+-++++++.++..++.....++
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 333221 236777888888888887776665443
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.14 E-value=0.01 Score=63.71 Aligned_cols=158 Identities=16% Similarity=0.158 Sum_probs=93.0
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 007159 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV----SKGLSITAVRKIMQSIGFLGPAFFLTQLSH-VR 520 (615)
Q Consensus 446 ~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 520 (615)
-...|+++.+|+++.+...+..+..+-.. ..++.|.++|-+. |||..+. +...++. +....+..... ..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~----i~~~~~~-~~~~~~~~~~~~~~ 84 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMI----IGWLLGA-VSALVLALLPASES 84 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHH----HHHHHHH-HHHHHHHhcccccc
Confidence 34557788899999998887766655544 4567899999874 3332211 1111111 11111122221 12
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhh-hhh--ccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHH
Q 007159 521 TPAMAVLCMACSQGSDAFSQSGLYS-NHQ--DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 597 (615)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~ 597 (615)
.......++++......+.-..... ..+ .-.|+.+|...+....+..+|..++..+.|.+.+..+++..|.+.+++.
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHH
Confidence 2222222322222222222222221 111 2234448999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHhc
Q 007159 598 IIGTLVWNLFAT 609 (615)
Q Consensus 598 l~~~l~~~~~~~ 609 (615)
++..+..+.+.+
T Consensus 165 ~l~~~~~~~~~~ 176 (433)
T PF03092_consen 165 LLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHhhh
Confidence 777655554444
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.97 E-value=0.015 Score=60.82 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=75.6
Q ss_pred chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHH--HHHHHH---HHhhhccChHHHHHHHHHHHhhhcchh
Q 007159 241 STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW--SVATVL---TPVAARIGLPFLLIMRAFMGIGEGVAM 315 (615)
Q Consensus 241 ~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~--~i~~~l---~~~~~~~~~~~ll~~r~l~G~~~~~~~ 315 (615)
..++-+...+|.+|.+++.--.. +. |+ |++.+.+.+-. .+..++ .-+.+ +.|.+++..+..|+..|..+
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~-~~-ri--r~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLP-FF-RI--RRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhccee-ee-eh--hhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhhhHHH
Confidence 44566666777776666543321 11 23 44443333222 222222 22333 56778888999999999999
Q ss_pred hHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 316 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 316 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
......+.+-.++++|..++|....+-++|..++.+++-.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877554
No 275
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.95 E-value=0.018 Score=60.14 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=76.0
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 007159 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC 528 (615)
Q Consensus 449 ~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 528 (615)
-|.+..|| +...+-+...++.+..+...+.+-|+.||+|-|.....+. ...+++..+=.+...-+ ..+..+. ..
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt--~ln~iGa~Ir~iss~p~-v~~~f~~--~l 142 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT--VLNGIGAWIRLISSLPF-VPPLFRR--PL 142 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH--HHHHHHHHHhhhccCcc-ccccchh--hh
Confidence 35566677 6677778888888999999999999999999884332211 11122211111111000 0122221 11
Q ss_pred HHHHhhhhhhhhhh-----hhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheeccC
Q 007159 529 MACSQGSDAFSQSG-----LYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG 584 (615)
Q Consensus 529 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~ 584 (615)
...+....+...+. .-.....+++++|+++..+..+...+|.++|.++...+....
T Consensus 143 ~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 143 THTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 11111111121111 122345688999999999998888999999988888887643
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.91 E-value=0.0059 Score=60.17 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhh
Q 007159 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 323 (615)
Q Consensus 244 ~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~ 323 (615)
.|.+.-.-.+...+..+.+..+.||+..-.=+.+..++.+.+.++.+++. +.++-+++-.+..++.|.......++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 46666667778888888888889987544444455666777777788887 6777777777888887776665555544
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcC--CCchHHHHHHHHHHHHHHHHHHhhhcC
Q 007159 324 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGSIWFALWLKKAYS 386 (615)
Q Consensus 324 ~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~ 386 (615)
.+ ++ ...+-++.+.+.++++|..--..+.+. +..|.+.++...+-++.....++..+.
T Consensus 142 ~Y-~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 142 RY-PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred cC-CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 33 22 245566677777777777666666663 446777776666655544444444433
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.76 E-value=0.2 Score=53.28 Aligned_cols=177 Identities=12% Similarity=0.154 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 504 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~ 504 (615)
..+.+.+..++..++.-......|.++.+.+.-+..-.+.+-..-.+..++.+...|.+.||..|.+...... ...-+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l--~~Qn~ 80 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL--VVQNL 80 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH--HHHHH
Confidence 4567778888888998888899999999877666666666666666777777888899999998887655433 22222
Q ss_pred HHHHHHHHHHH-hccccc----hHHHHHHHHH---Hhhhhhhhhhhhh-hhhh-------ccCcchhhHHHHHHHHHHHH
Q 007159 505 GFLGPAFFLTQ-LSHVRT----PAMAVLCMAC---SQGSDAFSQSGLY-SNHQ-------DIGPRYAGVLLGLSNTAGVL 568 (615)
Q Consensus 505 ~~~~~~~~l~~-~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~-~~~~-------~~~~~~~g~~~gl~~~~~~l 568 (615)
+.++....+.. +..... .+....++.. .+...-....... .+-+ .-.++......+.+.-+-.+
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 22222222221 111111 1112111111 1111111111111 1111 12345667777777777788
Q ss_pred HHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 569 AGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 569 g~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
.-.++|++.|.+.+..++.....+.++..+++..+
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888887777765
No 278
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.64 E-value=0.091 Score=47.55 Aligned_cols=107 Identities=13% Similarity=0.031 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHhhhhhhhhhhhhh
Q 007159 466 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS 545 (615)
Q Consensus 466 ~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (615)
.++......+..++.+.+.+++|.|. .+.++.+...+.......+..+.++....+.+.+...++..-...
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~---------sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKW---------SMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHH---------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 44555556777788889999999883 333444444444444444445555555555555555554444444
Q ss_pred hhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhee
Q 007159 546 NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 581 (615)
Q Consensus 546 ~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~ 581 (615)
+.+...++.+++..|+...+...+..+|.++.-.+.
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556788899999998888888888877655443
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.50 E-value=0.034 Score=59.56 Aligned_cols=109 Identities=13% Similarity=0.031 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhcCCc-hHHHHHHHHHHHHHHHHHhhhc----------cChHHHHHHHHHHHhhhcc
Q 007159 245 GLIQSSFFWGYLLTQIVGGIWADKFGGK-PVLGFGVIWWSVATVLTPVAAR----------IGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 245 g~i~s~~~l~~~l~~~~~G~l~Dr~Grk-~~l~~~~~l~~i~~~l~~~~~~----------~~~~~ll~~r~l~G~~~~~ 313 (615)
-+++.++.++-.+|..+..+.. .-++| +.+.+..++-.+..-++.++.. .+-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4566677777777776544321 11222 1333333333333322222210 1445677778999999999
Q ss_pred hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
.....+.+..+..+++||..+-.+...+..+|..+|..++-
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888888888888877644
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.29 E-value=0.37 Score=51.96 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhccccHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKF-----NLTESGLFCVLPWLTMAVF-ANMGGWIADTLVSKGLSITAVR 498 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~-----s~~~~g~~~~~~~i~~~ig-~~l~g~l~dr~g~~~~~~~~~~ 498 (615)
+++.+.+..|+..+.++..- -++|.+.. +.+...++.+...+.+.+. .++.+++++|++++++......
T Consensus 8 k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 45555555555544443322 23455444 4466777776665655555 7788999999999976653322
Q ss_pred HHHHHHHHHHHHHHHHHhccccc--------------------------hHHHHHHHHHHhhhhhhhhh-hhhh-hhhcc
Q 007159 499 KIMQSIGFLGPAFFLTQLSHVRT--------------------------PAMAVLCMACSQGSDAFSQS-GLYS-NHQDI 550 (615)
Q Consensus 499 ~~~~~~~~~~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 550 (615)
....... .+.....+..+. .|......+..-..+....+ .... ..+..
T Consensus 83 ~F~~~f~----lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 83 PFLGFFA----LFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHH----HHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1111111 111111111111 11111222222222222222 2223 44455
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhhee
Q 007159 551 GPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 581 (615)
Q Consensus 551 ~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~ 581 (615)
.+++..+..++.....++|..+++.+..++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6699999999999999999999999988876
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.19 E-value=0.22 Score=52.29 Aligned_cols=160 Identities=9% Similarity=-0.015 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHH-hCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 007159 443 LLTWMPTYYNQV-LKFNLTESGLF-CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (615)
Q Consensus 443 ~~~~~p~~~~~~-~g~s~~~~g~~-~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (615)
...++..|+.+. .|++..+..-- +-...-...+..+....+.|.++.|++++.. .++.++. ..+ +.+..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~------~~~~i~t--~~l-ll~~~ 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQ------ALSYIIT--WLL-LLFGT 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH------HHHHHHH--HHH-HHHHC
Confidence 345778888876 89998887533 3233333444555677899999888543321 1221111 111 22223
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec--cCChhHHHHHHHHHHH
Q 007159 521 TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ--RGSWDDVFKVAVVLYI 598 (615)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~--~~g~~~~f~~~~~~~l 598 (615)
....+-+.-++.+...+.-......+-..+++++.-++.+....+..+|.+++..++-.+.. ..+|.....+..+...
T Consensus 93 sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~ 172 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVS 172 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 33333333333333333333333334556678888888888888888888888887776665 3677777777777667
Q ss_pred HHHHHHHHHhcCC
Q 007159 599 IGTLVWNLFATGE 611 (615)
Q Consensus 599 ~~~l~~~~~~~~~ 611 (615)
+++++.+++.+.+
T Consensus 173 ~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 173 LALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHcCCCC
Confidence 7776666665544
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.17 E-value=0.19 Score=53.61 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhHHhhh---hcCCchHHHHHHHHHHHHHHHHHhhhc----------------cChHHHHHHHHHHHhh
Q 007159 250 SFFWGYLLTQIVGGIWAD---KFGGKPVLGFGVIWWSVATVLTPVAAR----------------IGLPFLLIMRAFMGIG 310 (615)
Q Consensus 250 ~~~l~~~l~~~~~G~l~D---r~Grk~~l~~~~~l~~i~~~l~~~~~~----------------~~~~~ll~~r~l~G~~ 310 (615)
...++..++..+.+.+.+ ++|+++.+.++.++..++.++.-+... .+....++..++.|++
T Consensus 287 ~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~ 366 (461)
T KOG3098|consen 287 GIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG 366 (461)
T ss_pred HHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH
Confidence 334444455555666665 478999999999888888776554321 1245778888999999
Q ss_pred hcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhh
Q 007159 311 EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI 355 (615)
Q Consensus 311 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~ 355 (615)
.+........++.+.. +++|.++.++...-..++..++-...+.
T Consensus 367 D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 367 DACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999 7889999998888777777765555443
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.05 E-value=1.1 Score=45.05 Aligned_cols=72 Identities=10% Similarity=0.120 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcc
Q 007159 252 FWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI 326 (615)
Q Consensus 252 ~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~ 326 (615)
.+.-+...++.+.+..++|-|+++.++...+......- +-+ .+..++-...+.|++.+..+..--+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 34445556666688999999999988887776543321 112 4667888889999999998877777666554
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.94 E-value=0.53 Score=46.52 Aligned_cols=152 Identities=18% Similarity=0.180 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHh
Q 007159 439 GTFILLTWMPTYYNQVLKFNL--TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 516 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~~g~s~--~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 516 (615)
.........+.+..+ .+.+. ...++......+...++.++.|++.||.|+|+....+. ............
T Consensus 17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~-------~~~~~~~~~~~~ 88 (338)
T COG0477 17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGL-------LLFLLGTLLLAL 88 (338)
T ss_pred hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHH-------HHHHHHHHHHHh
Confidence 333444455666555 34444 46788888888888888899999999998774332211 101111111111
Q ss_pred ccccchHHHHHHHH-HHhhhhhhhhhhhhhhhhccCc-chhhHHHHHHHH-HHHHHHHHHHHHhhheecc--CChhHHHH
Q 007159 517 SHVRTPAMAVLCMA-CSQGSDAFSQSGLYSNHQDIGP-RYAGVLLGLSNT-AGVLAGVFGTAATGYILQR--GSWDDVFK 591 (615)
Q Consensus 517 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~gl~~~-~~~lg~~igp~l~G~l~~~--~g~~~~f~ 591 (615)
.........+.... .+.+.....+.......+..++ +.++...+.... ...+|..++|.+.+.+... .+|+..|.
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFL 168 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 11112233332222 2333332333333333444443 578888888888 5778888888777777654 56777555
Q ss_pred HHHHHHH
Q 007159 592 VAVVLYI 598 (615)
Q Consensus 592 ~~~~~~l 598 (615)
.......
T Consensus 169 ~~~~~~~ 175 (338)
T COG0477 169 LAALLGL 175 (338)
T ss_pred HHHHHHH
Confidence 5554443
No 285
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.01 E-value=0.47 Score=48.45 Aligned_cols=166 Identities=10% Similarity=0.098 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhcCC-CchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHH---
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNW-NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA--- 285 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~-s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~--- 285 (615)
+.+.+++++...+.-++...+..++.+++- |...+..-..+-.....+..++.|.+.|+..|+|++...+++-=++
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 344556666666666777777777777654 3334444444555566777888899999999999887766543322
Q ss_pred ---HHHHHhhhc----cChHHHHHHHHHHHhhhcchh--hHHHHH--hhhcc----cccchhhH---HHHHHHHHHHHHH
Q 007159 286 ---TVLTPVAAR----IGLPFLLIMRAFMGIGEGVAM--PAMNNM--LSKWI----PVSERSRS---LAFVYSGMYLGSV 347 (615)
Q Consensus 286 ---~~l~~~~~~----~~~~~ll~~r~l~G~~~~~~~--~~~~~~--i~~~~----~~~~r~~~---~~~~~~~~~lG~~ 347 (615)
.++..+... .+.+++..+.++.-...+... ..+.++ --||. ..+.+... ++.....-..-..
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 233333332 134445544444333222211 111111 12332 22333333 3555556666778
Q ss_pred HHhhhHhhhhcCCCchHHHHHHHHHHHH
Q 007159 348 TGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (615)
Q Consensus 348 ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 375 (615)
+.|++.|.++...+-|..-..+++..++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 8999999998887777654444444333
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.52 E-value=0.35 Score=50.76 Aligned_cols=87 Identities=9% Similarity=0.045 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCc---chhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 523 AMAVLCMACSQGSDAFSQSGLYSNHQDIGP---RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
.+.+.+.++..+.++.=+.......+..++ +++.+.+.++....++|..+++.+.+++-+..||...|.+.++..++
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 344445555555555555554445555444 46788888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 007159 600 GTLVWNLFAT 609 (615)
Q Consensus 600 ~~l~~~~~~~ 609 (615)
+.+.++.-++
T Consensus 115 ~~~~f~~~~~ 124 (372)
T PF00854_consen 115 ALIVFLSGRK 124 (372)
T ss_dssp HHHHHHCCCC
T ss_pred HHHHHHhCCc
Confidence 8887766543
No 287
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.20 E-value=0.012 Score=64.90 Aligned_cols=170 Identities=11% Similarity=0.088 Sum_probs=1.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHhc
Q 007159 438 WGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 517 (615)
Q Consensus 438 ~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 517 (615)
....++....-.-++++++++..++|++.+..-++.++..++..++.+|..|.|.+-.+ .+++.++.++.++=-+...
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g--~~~~~~g~~l~~lPhf~~~ 93 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIG--ALLMGLGSLLFALPHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeec--HHHHHHHHHHHhccHhhcC
Confidence 33444444444456777999999999999999999999999999998886655543322 2333333333221111100
Q ss_pred c---------------------------------------cc-----chHHHHHHHHHHhhhhhhhhhhhhhhhhccCcc
Q 007159 518 H---------------------------------------VR-----TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR 553 (615)
Q Consensus 518 ~---------------------------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (615)
. .. ...+++.-++.+.+.....+.....+-+.++++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 0 00 011112223334444444444444455667788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhheecc----------------------CChhHHHHHHHHHHHHHHHHHHHHhc
Q 007159 554 YAGVLLGLSNTAGVLAGVFGTAATGYILQR----------------------GSWDDVFKVAVVLYIIGTLVWNLFAT 609 (615)
Q Consensus 554 ~~g~~~gl~~~~~~lg~~igp~l~G~l~~~----------------------~g~~~~f~~~~~~~l~~~l~~~~~~~ 609 (615)
+.+...|+..++..+|-++|-.++|.+... +-|...|++.+++.++..+.++.+.|
T Consensus 174 ~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk 251 (539)
T PF03137_consen 174 NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPK 251 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 899999999999999999998888877742 13677777778777777766665544
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.89 E-value=0.02 Score=58.59 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHHHH---HHHHhhhc--------cChHHHHHHHHHHHhhhcc
Q 007159 246 LIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVAT---VLTPVAAR--------IGLPFLLIMRAFMGIGEGV 313 (615)
Q Consensus 246 ~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i~~---~l~~~~~~--------~~~~~ll~~r~l~G~~~~~ 313 (615)
.++.+|.++-.+|..+.++..-+ ..+|+++ +..++-.+.. +++...+. .+.++.++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35667888888888776653211 1244443 3333333222 22211100 1335667778899999999
Q ss_pred hhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 314 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
.....+.+..+..++++|..+-.+......+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888877777777777777766543
No 289
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.61 E-value=0.22 Score=55.87 Aligned_cols=168 Identities=13% Similarity=0.129 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHH------
Q 007159 442 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ------ 515 (615)
Q Consensus 442 ~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 515 (615)
+++...-.-+++.++++..+.|++...+-++..+...+..++..|..|.+.+-.+. +.+.++.++.++--+.
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~--~~m~lgsll~alPHf~~~~y~~ 191 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL--VLMGLGSLLFALPHFFSGPYEY 191 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech--hHHHHHHHHHhChHHhcCcchh
Confidence 44444445567789999999999999999999988888899988887776654443 3333333332211000
Q ss_pred ---h-------c---------------------------cccc-hH--HHHHHHHHHhhhhhhhhhhhhhhhhccCcchh
Q 007159 516 ---L-------S---------------------------HVRT-PA--MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYA 555 (615)
Q Consensus 516 ---~-------~---------------------------~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (615)
. . ..+. ++ +++..++.|.+...+.+.....+-+.+.+++.
T Consensus 192 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~S 271 (735)
T KOG3626|consen 192 ELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNS 271 (735)
T ss_pred hhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCC
Confidence 0 0 0000 11 22222333334333333333334444566888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhheecc-------------------CChhHHHHHHHHHHHHHHHHHHHHhcCC
Q 007159 556 GVLLGLSNTAGVLAGVFGTAATGYILQR-------------------GSWDDVFKVAVVLYIIGTLVWNLFATGE 611 (615)
Q Consensus 556 g~~~gl~~~~~~lg~~igp~l~G~l~~~-------------------~g~~~~f~~~~~~~l~~~l~~~~~~~~~ 611 (615)
...+|+..++..+|-++|-++++++... +-|...|++++.+.++..+.++++.++.
T Consensus 272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999888888887642 1377888889988888888877775543
No 290
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.07 E-value=1.2 Score=35.47 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007159 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~ 491 (615)
+=+.+...+|...++ .+++..+.|++-+...++..+|.+...++.++...++
T Consensus 7 gRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~ 58 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR 58 (85)
T ss_pred HHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 345556677777766 7999999999999999999999999998888755443
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.76 E-value=0.21 Score=52.52 Aligned_cols=154 Identities=11% Similarity=0.010 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhccccHHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT----LVSKGLSITAVRKI 500 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr----~g~~~~~~~~~~~~ 500 (615)
.+.......+...++...-..+.|+|+++ +|.+....+.++...-+.+.+.+++.|..+|| +||||..+.....
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~- 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL- 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhH-
Confidence 44555555666677777778899999988 69999999998888888889999999999996 6888876643221
Q ss_pred HHHHHHHHHHHH----HHHhccccc--hHHHHHHHHHHhhhh-----hhhhhhhhhhhhccCcchhhH-HHHHHHHHHHH
Q 007159 501 MQSIGFLGPAFF----LTQLSHVRT--PAMAVLCMACSQGSD-----AFSQSGLYSNHQDIGPRYAGV-LLGLSNTAGVL 568 (615)
Q Consensus 501 ~~~~~~~~~~~~----l~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~-~~gl~~~~~~l 568 (615)
.+.+++...... ..+...... ....+...+++.... ...-+.-....+...++++.+ +.+.+..+..+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 222222221111 111111111 112222222222211 112222222333344444555 89999999999
Q ss_pred HHHHHHHHhhhe
Q 007159 569 AGVFGTAATGYI 580 (615)
Q Consensus 569 g~~igp~l~G~l 580 (615)
|+.+|..++++.
T Consensus 191 GnvLGY~~g~y~ 202 (498)
T KOG0637|consen 191 GNVLGYALGSYL 202 (498)
T ss_pred cceeeeeccccc
Confidence 999988887754
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.56 E-value=0.072 Score=51.33 Aligned_cols=65 Identities=8% Similarity=0.190 Sum_probs=44.9
Q ss_pred ccHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q 007159 415 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 479 (615)
Q Consensus 415 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l 479 (615)
.+|...+++-.++.+.+.+.+.-.....-..|+|.|..+.++++....+++-.+..+.....+.+
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 35666677777777777777777777777788888887777777766666655555555444443
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.03 E-value=0.05 Score=55.62 Aligned_cols=113 Identities=10% Similarity=-0.005 Sum_probs=1.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHH----HHHhccccchHHHHHHHHHHhhhhhhh
Q 007159 465 FCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIMQSIGFLGPAFF----LTQLSHVRTPAMAVLCMACSQGSDAFS 539 (615)
Q Consensus 465 ~~~~~~i~~~ig~~l~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (615)
.+..++++-.+|+.+.++..-+. .+|.+......+++..-.++.+..- .......+..+.++..++++..-+...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45678889999999887643221 2222222111111111111111000 000011122233333333333333333
Q ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 007159 540 QSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT 577 (615)
Q Consensus 540 ~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~ 577 (615)
........+.++++++..+-.+...+..+|..+|..+.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455566677777777777777777777776553
No 294
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.78 E-value=6.6 Score=43.63 Aligned_cols=178 Identities=12% Similarity=0.106 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHH
Q 007159 429 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLG 508 (615)
Q Consensus 429 ~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 508 (615)
++....+...+++++..-+-.|+...++.+...+.-.............+++++++|.+-.|...+.. ...+..+++.+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~-~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINI-GSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHH
Confidence 33344455556666667777888888898887777777777777777778899999987554322211 11222222211
Q ss_pred HHHHHHHh-ccc---------------cch---HHHHHHHHHHhhhhhhhhhhhhhhhhccC---c-c--hhhHHHHHHH
Q 007159 509 PAFFLTQL-SHV---------------RTP---AMAVLCMACSQGSDAFSQSGLYSNHQDIG---P-R--YAGVLLGLSN 563 (615)
Q Consensus 509 ~~~~l~~~-~~~---------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~g~~~gl~~ 563 (615)
........ ..+ ... .+...+.....+.++.-+.....-.+.++ + + .....+.+..
T Consensus 121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y 200 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY 200 (571)
T ss_pred HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence 11111111 000 000 11112222222333333332222333333 2 2 3347778888
Q ss_pred HHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 564 TAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 564 ~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
...++|..++-.+.-++-+..+|...|.+..++.+++.++++..
T Consensus 201 f~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 201 FSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 88899999999999999888999999999999988888777654
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.63 E-value=11 Score=39.68 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHH
Q 007159 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 505 (615)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~ 505 (615)
++.+++..+-.......+.+..+.|.....+-+. .-.+...+.+.+.+..++...+--+...|.....+. .+....
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~--~l~~~~ 95 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGY--LLSLIA 95 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 3444444444445556666666655555433333 333333444444444444444444433332111111 111111
Q ss_pred HHHHHHHHHHh---ccc--cchHHHHHHHHHHhhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhhe
Q 007159 506 FLGPAFFLTQL---SHV--RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 580 (615)
Q Consensus 506 ~~~~~~~l~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l 580 (615)
.+....+.+.. ... .......+......+..+......+......|+++....++=.+.++.+....--..-...
T Consensus 96 il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~ 175 (406)
T KOG1479|consen 96 ILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAF 175 (406)
T ss_pred HHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhc
Confidence 11111111111 111 2223334445555666677777888888888998876555444444433333322222222
Q ss_pred ecc-CChhHHHHHHHHHHHHHHHHHHHH
Q 007159 581 LQR-GSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 581 ~~~-~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
-|. .+-..-|.+..++.+++.+++..+
T Consensus 176 ~~~~~sA~~yF~~s~~~~llC~i~y~~l 203 (406)
T KOG1479|consen 176 SDSRTSALIYFITSTVILLLCFVLYLVL 203 (406)
T ss_pred CCCCceeehhHHHHHHHHHHHHHHHHHh
Confidence 222 344455666667777777776644
No 296
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.89 E-value=15 Score=37.55 Aligned_cols=144 Identities=14% Similarity=0.020 Sum_probs=64.3
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH-HHHHHHHH-HHHhccccchHHHHHHHHHH
Q 007159 455 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI-GFLGPAFF-LTQLSHVRTPAMAVLCMACS 532 (615)
Q Consensus 455 ~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~~~~-l~~~~~~~~~~~~~~~~~~~ 532 (615)
.|-+..+.+++.+.+...+.+|+.+.-++.|.--.-+.... -..+-.+ ++...+.. .+.......-+++.+.....
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~v--Elllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vI 115 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDV--ELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVI 115 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHH--HHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 56666677777777777777777666555544222211111 1111112 22222222 12222222333333333333
Q ss_pred hhhhhhhhhhhhhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHhhheec-cCChhHHHHHHHHHHHHHH
Q 007159 533 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGT 601 (615)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~-~~g~~~~f~~~~~~~l~~~ 601 (615)
+...+.-.+....+.+. ..+......+.....-++|...+.++..++.- ..|.-..-.+.+.+-+++.
T Consensus 116 G~LVG~EiPL~mrml~~-r~a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 116 GVLVGAEIPLLMRMLQR-RQAKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred HHHHhcchHHHHHHHHH-HHHHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 33334444444433333 11222223333344477787777777766543 3454444444454444444
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=86.24 E-value=11 Score=37.07 Aligned_cols=133 Identities=15% Similarity=0.086 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHhhhhcCCc--hHHHHHHHHHHHHHHHHHhh----hc-cChHHHHHHHHHHHhhhcchhh
Q 007159 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGK--PVLGFGVIWWSVATVLTPVA----AR-IGLPFLLIMRAFMGIGEGVAMP 316 (615)
Q Consensus 244 ~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk--~~l~~~~~l~~i~~~l~~~~----~~-~~~~~ll~~r~l~G~~~~~~~~ 316 (615)
-|.+++.+.++.++|.-+..++..|-..| ..+.+..++.+....+..+. +. -+...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999998988875544 44555544444443332221 11 1122234555566778889999
Q ss_pred HHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHH
Q 007159 317 AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (615)
Q Consensus 317 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 376 (615)
..+.+=+++.|+++|...+.++..-..+-..++-..--.-....+-|..|-+..+...+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a 423 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVA 423 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHH
Confidence 999999999999999998888766444333322111000001134456666655554444
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=84.60 E-value=16 Score=37.90 Aligned_cols=181 Identities=10% Similarity=0.037 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhccccHHHHHH
Q 007159 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD-----TLVSKGLSITAVRK 499 (615)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~d-----r~g~~~~~~~~~~~ 499 (615)
.+..+.+.+.+.+..+.... .+|..++. .|.|.+..+.+...+.=- ---+++..+.| |+||||..+.-
T Consensus 32 ~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp--- 104 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVP--- 104 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeee---
Confidence 45555556666555555444 88988885 578877766654433222 12346666777 99999864432
Q ss_pred HHHHHHHHHHHHHHHH---hc-cccchHHHHH--HHHHHhhhhhhhhhhhhh-hhhccCcchhhHHHHHHHHHHHHHHHH
Q 007159 500 IMQSIGFLGPAFFLTQ---LS-HVRTPAMAVL--CMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVF 572 (615)
Q Consensus 500 ~~~~~~~~~~~~~l~~---~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~gl~~~~~~lg~~i 572 (615)
....++..+..+.... .. ....+...+. .++...+..+..-.+... ......+++.|-+..........|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 1222332222222111 11 1111211111 111111211222222211 233456777766666655555666655
Q ss_pred HHHHhhheec--------------c--CChhHHHHHHHHHHHHHHHHHHHHhcCCc
Q 007159 573 GTAATGYILQ--------------R--GSWDDVFKVAVVLYIIGTLVWNLFATGER 612 (615)
Q Consensus 573 gp~l~G~l~~--------------~--~g~~~~f~~~~~~~l~~~l~~~~~~~~~k 612 (615)
+..+.=.+-. . .....-+++.+.+.+++..+..+.++++.
T Consensus 185 ~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 185 GNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5544322222 0 11234455667777777666666665543
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=83.90 E-value=22 Score=36.60 Aligned_cols=95 Identities=4% Similarity=-0.100 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhcCCchHHH--HHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHh
Q 007159 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG--FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 322 (615)
Q Consensus 245 g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~--~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i 322 (615)
|..-++..+..+++.+..|.+--++.|..-++ ++.+..+...++++... +.|+..++.++.+.-.....+.+...+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 66677778888889999999987777664333 33333333334444444 788888888888888888888998899
Q ss_pred hhcccccchhhHHHHHHHH
Q 007159 323 SKWIPVSERSRSLAFVYSG 341 (615)
Q Consensus 323 ~~~~~~~~r~~~~~~~~~~ 341 (615)
+.....+.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 9888888889888887763
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=82.66 E-value=47 Score=34.56 Aligned_cols=170 Identities=12% Similarity=0.116 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHH
Q 007159 427 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 506 (615)
Q Consensus 427 ~~~~l~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~~~~~~~~~~~~ 506 (615)
..+...+++..++--........|+.+..|-+....+..-.+-+....+...+.|...|+..|.|+....+ .+.-++.
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lqNlSv 107 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQNLSV 107 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhccHHH
Confidence 34445556666666555566666766655544444444434444444555566777788888887655332 2222333
Q ss_pred HHHHHHH-HHhccc-----cchHHHHHHHHHHhhhhhhhhhhhhh----hh--------hccCcchhhHHHHHHHHHHHH
Q 007159 507 LGPAFFL-TQLSHV-----RTPAMAVLCMACSQGSDAFSQSGLYS----NH--------QDIGPRYAGVLLGLSNTAGVL 568 (615)
Q Consensus 507 ~~~~~~l-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------~~~~~~~~g~~~gl~~~~~~l 568 (615)
+..+..+ ..+... ..++ +..+..+.............+ +. +.-++.......+..-.+-..
T Consensus 108 ~vagglvi~~l~~~~~~~~t~pv-~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~ 186 (503)
T KOG2601|consen 108 IVAGGLVITLLVHKDLKSATSPV-FTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQS 186 (503)
T ss_pred HHHHHHHhhheeecchhcccccH-HHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhh
Confidence 2222222 222222 2333 222332222222222211111 11 111222333333555556667
Q ss_pred HHHHHHHHhhheeccCChhHHHHHHHHHHHH
Q 007159 569 AGVFGTAATGYILQRGSWDDVFKVAVVLYII 599 (615)
Q Consensus 569 g~~igp~l~G~l~~~~g~~~~f~~~~~~~l~ 599 (615)
...+.|.+.|.+....+.+..-...++-.++
T Consensus 187 tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 187 TNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 7889999999999988777654444444333
No 301
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=79.29 E-value=1.3e+02 Score=34.79 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHHH
Q 007159 340 SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 373 (615)
Q Consensus 340 ~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 373 (615)
.+..++.++..+++-++...++|..++++.++++
T Consensus 108 ~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 108 PVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3444555555555555544567777776555554
No 302
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=78.52 E-value=47 Score=35.95 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=76.5
Q ss_pred HHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCch-----------------------------HHHHHHHHH
Q 007159 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-----------------------------VLGFGVIWW 282 (615)
Q Consensus 232 ~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~-----------------------------~l~~~~~l~ 282 (615)
.-.-|.|++..+.+++.-+..=..++.+...|+++. |+++ ..+.+...-
T Consensus 303 LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~--g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gR 380 (544)
T PF13000_consen 303 LKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSA--GSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGR 380 (544)
T ss_pred HHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc--CCCccccccccccccccccchhhhhhccchhhHHHHHHHHHH
Confidence 335678999999888776655555566666666654 3332 112222222
Q ss_pred HHHHHHHH----hhh-c--cC---hHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhh
Q 007159 283 SVATVLTP----VAA-R--IG---LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (615)
Q Consensus 283 ~i~~~l~~----~~~-~--~~---~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l 352 (615)
.+..++.. ..+ + .+ +..+++.-++.-+..-..+.+.++.-+++.+|.--|+.|.+.+...++|+---..+
T Consensus 381 L~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~ 460 (544)
T PF13000_consen 381 LVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTF 460 (544)
T ss_pred HHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHH
Confidence 22221111 111 0 01 23445556677777788889999999999999999999999999888776543333
Q ss_pred HhhhhcCCC
Q 007159 353 SPILIQKFG 361 (615)
Q Consensus 353 ~~~l~~~~g 361 (615)
.-++++.+.
T Consensus 461 vL~lVD~fT 469 (544)
T PF13000_consen 461 VLWLVDYFT 469 (544)
T ss_pred HHHHhhhcc
Confidence 333444333
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.45 E-value=41 Score=33.09 Aligned_cols=99 Identities=19% Similarity=0.369 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhh-cCCchHHH----HHHHHHHHHHHHHH-hhhc--cChHHHHHHHHHHHhhhcchhh
Q 007159 245 GLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLG----FGVIWWSVATVLTP-VAAR--IGLPFLLIMRAFMGIGEGVAMP 316 (615)
Q Consensus 245 g~i~s~~~l~~~l~~~~~G~l~Dr-~Grk~~l~----~~~~l~~i~~~l~~-~~~~--~~~~~ll~~r~l~G~~~~~~~~ 316 (615)
....-++..++.+|.+..|++... +.||+.+. .+.++++++.++.. +... .+...+++..++.|++.=...+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344456666666777777887753 55666544 33444444444421 1221 1345677777777776544433
Q ss_pred HHHHHhhhcc---cccchhhHHHHHHHHHHH
Q 007159 317 AMNNMLSKWI---PVSERSRSLAFVYSGMYL 344 (615)
Q Consensus 317 ~~~~~i~~~~---~~~~r~~~~~~~~~~~~l 344 (615)
..-. +.+-+ +|++-|..+|+.-..+++
T Consensus 224 ViL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 224 VILN-LPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHhc-ChhhhcCCCcceehhHHHHHHHHHHH
Confidence 3322 22222 244445555544443333
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=72.87 E-value=1.2e+02 Score=31.31 Aligned_cols=131 Identities=19% Similarity=0.220 Sum_probs=78.0
Q ss_pred hHHHHHhh-cCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHH----HHHHHHHHHHHHH-Hhhh--ccChHHH
Q 007159 229 AILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG----FGVIWWSVATVLT-PVAA--RIGLPFL 300 (615)
Q Consensus 229 ~~~~i~~~-~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~----~~~~l~~i~~~l~-~~~~--~~~~~~l 300 (615)
++..+... +|-+..+.+++.+.|.+...+|+...-++.|.--.-+.+. ++++.-.-..++. .|+. ..+.+.+
T Consensus 29 al~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 29 ALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 33344443 4667788999999999999999988877776432221211 2222111111222 2333 1234677
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhh-cCCC
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI-QKFG 361 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~-~~~g 361 (615)
.++-+++|.-.|+-.|..+.++..-. .+.....+.....-.+|...|.++-+++. ...|
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LG 168 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLG 168 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhc
Confidence 88889999999999999999987722 22222223333346777777777666543 3444
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=71.49 E-value=93 Score=29.44 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=20.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCch
Q 007159 329 SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (615)
Q Consensus 329 ~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~ 363 (615)
+++.+.-.......-++..+|..+++++.+..+..
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~ 192 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW 192 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 33333344445555666777777777777777743
No 306
>PRK10263 DNA translocase FtsK; Provisional
Probab=68.79 E-value=23 Score=42.71 Aligned_cols=23 Identities=22% Similarity=0.102 Sum_probs=11.9
Q ss_pred HHHHHHhhhHhhhhcCCCchHHH
Q 007159 344 LGSVTGLAVSPILIQKFGWPSVF 366 (615)
Q Consensus 344 lG~~ig~~l~~~l~~~~gw~~~f 366 (615)
.|+++|.+++.++...+|.....
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~ 164 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGT 164 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHH
Confidence 35555555555555555543333
No 307
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=67.70 E-value=1.3e+02 Score=30.19 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhh---cCCchHHHHHHHHHHHHH
Q 007159 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK---FGGKPVLGFGVIWWSVAT 286 (615)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr---~Grk~~l~~~~~l~~i~~ 286 (615)
+++-..+++.-+.....+-.+..+.+..+......+++.++.... ++.+-.++ ||.+|.=+++.++.++..
T Consensus 28 ~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa~~nav~L 101 (296)
T COG1230 28 LLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAAFLNALLL 101 (296)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHHHHHHHHH
Confidence 333333333334444444455667777776555555555433222 22333333 777777666655555544
Q ss_pred HH
Q 007159 287 VL 288 (615)
Q Consensus 287 ~l 288 (615)
+.
T Consensus 102 i~ 103 (296)
T COG1230 102 IV 103 (296)
T ss_pred HH
Confidence 43
No 308
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=66.88 E-value=2.2e+02 Score=31.87 Aligned_cols=32 Identities=22% Similarity=0.067 Sum_probs=19.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007159 457 FNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (615)
Q Consensus 457 ~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g 488 (615)
-+....++.+..++++..+--++.+....++.
T Consensus 322 g~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 322 GDLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35556666777777777665555565555543
No 309
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=66.41 E-value=1e+02 Score=33.97 Aligned_cols=27 Identities=15% Similarity=0.076 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007159 466 CVLPWLTMAVFANMGGWIADTLVSKGL 492 (615)
Q Consensus 466 ~~~~~i~~~ig~~l~g~l~dr~g~~~~ 492 (615)
...+.+++.+++..++++...++.++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 344555555666666666666665543
No 310
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=65.42 E-value=23 Score=35.71 Aligned_cols=67 Identities=10% Similarity=0.020 Sum_probs=53.8
Q ss_pred HHHHHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHh
Q 007159 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (615)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 354 (615)
-....+.+ +++..++..+.-|+-.|..+....--+.+-.++++|..+++....+-++|..++.+++-
T Consensus 333 ~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 333 QAWYWFTP--SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 33445555 67778888888999989888888888888778999999999999988888887776653
No 311
>PRK10263 DNA translocase FtsK; Provisional
Probab=60.60 E-value=53 Score=39.79 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 567 VLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 567 ~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
..|+++|..+...+...+|.....+++.+++++++++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiL 177 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTL 177 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3467777777776666666555555554444444433
No 312
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=58.15 E-value=53 Score=38.24 Aligned_cols=50 Identities=8% Similarity=0.043 Sum_probs=31.8
Q ss_pred HHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHH
Q 007159 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFG 278 (615)
Q Consensus 227 ~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~ 278 (615)
......+...+|++...+|+.+.. ++..+.-++....+-|-|.-.+.+..
T Consensus 953 V~~at~IG~vlGIse~VmGlTfLA--~GTSIPDlisSvivArkG~gdMAVan 1002 (1096)
T TIGR00927 953 VWWAHQVGETIGISEEIMGLTILA--AGTSIPDLITSVIVARKGLGDMAVSS 1002 (1096)
T ss_pred HHHHHHhhhhcCCChhhhhhhhhh--hhcccHHHHHHHHHHHccCCcceeee
Confidence 334555677888888887776543 36666666777777666755544333
No 313
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=52.00 E-value=2.5e+02 Score=30.34 Aligned_cols=25 Identities=0% Similarity=-0.393 Sum_probs=12.1
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHH
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFA 477 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~ 477 (615)
+..|++....--+.....+++++|.
T Consensus 46 kr~g~~~~~i~dl~i~~vi~giIGA 70 (460)
T PRK13108 46 TARGGERGMTYDIALWAVPFGLIGG 70 (460)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3357776654444333333444443
No 314
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.54 E-value=62 Score=26.91 Aligned_cols=25 Identities=28% Similarity=0.167 Sum_probs=14.3
Q ss_pred HHHHHHHHhhHHhhhhc-CCchHHHH
Q 007159 253 WGYLLTQIVGGIWADKF-GGKPVLGF 277 (615)
Q Consensus 253 l~~~l~~~~~G~l~Dr~-Grk~~l~~ 277 (615)
++..+.....|++.||| |-+++.++
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 34444445568999986 44444333
No 315
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=49.52 E-value=2.7e+02 Score=27.43 Aligned_cols=16 Identities=6% Similarity=-0.247 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 007159 439 GTFILLTWMPTYYNQV 454 (615)
Q Consensus 439 ~~~~~~~~~p~~~~~~ 454 (615)
..++....=..|+++.
T Consensus 193 vlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 193 VLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHhcccchHHHHHhC
Confidence 3344333334455553
No 316
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=46.70 E-value=2.4e+02 Score=26.15 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=31.5
Q ss_pred cchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHH
Q 007159 312 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (615)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~ 372 (615)
+.-.....+.+.+..|+++|.++.-+-..+..+--++.-.++.++.+. |.|..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 334455566677778877776655443333333344444556666664 35555544443
No 317
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.04 E-value=68 Score=26.70 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=26.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhheecc
Q 007159 552 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 583 (615)
Q Consensus 552 ~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~ 583 (615)
+..++.+.++--..-.+++.+-....||+.|+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777887777888888888999999997
No 318
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=43.82 E-value=4.7e+02 Score=28.61 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=38.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHHHHHHHH
Q 007159 552 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 603 (615)
Q Consensus 552 ~~~~g~~~gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~ 603 (615)
|+.....+|-.+...++...+-..+++.+....||.....+.-++.++..+.
T Consensus 314 ~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 314 PNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLL 365 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHH
Confidence 4666777777777777777777788899999999998877765555554443
No 319
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=43.22 E-value=1.4e+02 Score=27.33 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=28.8
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC------CchHHHHHHHHHHHHHHHHH
Q 007159 326 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------GWPSVFYSFGSLGSIWFALW 380 (615)
Q Consensus 326 ~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~------gw~~~f~~~~~~~~~~~~~~ 380 (615)
++.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.+++..+..+++
T Consensus 15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mv 75 (166)
T PF05255_consen 15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMV 75 (166)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHh
Confidence 44445555555555544433333333333333322 46777788887776665554
No 320
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=42.90 E-value=28 Score=33.35 Aligned_cols=51 Identities=31% Similarity=0.411 Sum_probs=35.5
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhh
Q 007159 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (615)
Q Consensus 301 l~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l 352 (615)
.+...-.|+|.+.++.++.+-+.+.+| +......++..+..-+..+.|-.+
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556799999999999999999995 555666666655555555544433
No 321
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=41.50 E-value=2.7e+02 Score=27.97 Aligned_cols=85 Identities=8% Similarity=0.016 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCC--CchHHH--HHHHHHHHH
Q 007159 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--GWPSVF--YSFGSLGSI 375 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~--gw~~~f--~~~~~~~~~ 375 (615)
.-..|.+.|+-.- .+.+.++++.-.||+++.--..--.....+++.++-|++|- +.+.. |.+..- +.++++.++
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~-~l~~~~~~i~~~~i~~~l~~~t~~ 99 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGL-LLNYTPWGIRLIPILISLSIFTLV 99 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHH-HHHhccCCcchhHHHHHHHHHHHH
Confidence 4556887777653 34667788888887544322222222333334444444443 34433 333322 233444444
Q ss_pred HHHHHHhhhcC
Q 007159 376 WFALWLKKAYS 386 (615)
Q Consensus 376 ~~~~~~~~~~~ 386 (615)
..++...++.+
T Consensus 100 ~~~~a~~rr~~ 110 (287)
T PF07760_consen 100 LSIIAYIRRRR 110 (287)
T ss_pred HHHHHHHhccc
Confidence 44444444433
No 322
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=41.41 E-value=4.8e+02 Score=28.04 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=24.6
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhHhhhhcCCCchHHHHHHHHH
Q 007159 327 PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (615)
Q Consensus 327 ~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~ 372 (615)
.+.+.+..+++...+.+.|...-|+..| .+|-|...+..++
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g-----~~Gf~p~lillll 58 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAG-----FGGLIPILLMLVL 58 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHh-----cchHHHHHHHHHH
Confidence 3455667777777777777777776655 2344454444433
No 323
>COG2119 Predicted membrane protein [Function unknown]
Probab=40.42 E-value=3e+02 Score=25.55 Aligned_cols=99 Identities=12% Similarity=0.179 Sum_probs=0.0
Q ss_pred CCCCCCCCCcccccCchhHHHHHHHHHHHHHHhhhhhHHHHhHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhh
Q 007159 188 PDGDLQETSPWWEQFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD 267 (615)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~D 267 (615)
++..++++.+ ..+++.++.-.+..+|+.=++.- -..+...+..+.+......--......++..++-+.+.++++
T Consensus 85 edk~~~~e~~----~~~~~~~f~~tfi~~FlaE~GDK-TQiATIaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ 159 (190)
T COG2119 85 EDKEDDEEAQ----AASPRGVFVTTFITFFLAELGDK-TQIATIALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAG 159 (190)
T ss_pred cccccccccc----ccccccHHHHHHHHHHHHHhccH-HHHHHHHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHc
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHh
Q 007159 268 KFGGKPVLGFGVIWWSVATVLTPV 291 (615)
Q Consensus 268 r~Grk~~l~~~~~l~~i~~~l~~~ 291 (615)
|+..|.+-.++.+++.+..+...+
T Consensus 160 ki~~r~l~~~aallFl~fal~~~~ 183 (190)
T COG2119 160 KLPERLLRFIAALLFLIFALVLLW 183 (190)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHH
No 324
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=39.86 E-value=1.7e+02 Score=30.30 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHH
Q 007159 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGV 279 (615)
Q Consensus 245 g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~ 279 (615)
.++.+.-.+..++.+.+.+ .||+...|++.+..
T Consensus 189 TilSStSs~FtL~la~if~--~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 189 TILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFV 221 (416)
T ss_pred hhhhhcchHHHHHHHHHcC--cchhhHHHHHHHHH
Confidence 3444433343444444444 89999888865443
No 325
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.54 E-value=62 Score=26.90 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=41.9
Q ss_pred chhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh
Q 007159 241 STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 241 ~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~ 292 (615)
+...|=+.+.|.-.+++.++++++..|+..+-+.=.+|..+..++..+..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3567889999999999999999999999988777777777766666554443
No 326
>COG3619 Predicted membrane protein [Function unknown]
Probab=38.13 E-value=3.8e+02 Score=25.88 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 007159 335 LAFVYSGMYLGSVTGLAVSPILIQKFG 361 (615)
Q Consensus 335 ~~~~~~~~~lG~~ig~~l~~~l~~~~g 361 (615)
-........++.++|...++++...+|
T Consensus 170 ~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 170 DWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555666666666666655444
No 327
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=38.09 E-value=4.3e+02 Score=26.53 Aligned_cols=28 Identities=7% Similarity=0.168 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhcchhhH-HHHHhhhccc
Q 007159 300 LLIMRAFMGIGEGVAMPA-MNNMLSKWIP 327 (615)
Q Consensus 300 ll~~r~l~G~~~~~~~~~-~~~~i~~~~~ 327 (615)
-.+...+.+++.|.+.-. ..-++.+.+.
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455566665554433 3334455553
No 328
>PTZ00370 STEVOR; Provisional
Probab=37.25 E-value=31 Score=34.02 Aligned_cols=29 Identities=7% Similarity=0.111 Sum_probs=18.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCc
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLFATGER 612 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~~~~~k 612 (615)
.+|..+-++..++.++..+++.|++|++|
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55666666666666666666666666554
No 329
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=36.79 E-value=2.4e+02 Score=30.48 Aligned_cols=11 Identities=9% Similarity=0.075 Sum_probs=8.3
Q ss_pred ChHHHHHHHHH
Q 007159 296 GLPFLLIMRAF 306 (615)
Q Consensus 296 ~~~~ll~~r~l 306 (615)
.+|++++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 57788887776
No 330
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.82 E-value=1.9e+02 Score=25.97 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=18.0
Q ss_pred hccCcchhhHHHHHHHHHHHHHHHH
Q 007159 548 QDIGPRYAGVLLGLSNTAGVLAGVF 572 (615)
Q Consensus 548 ~~~~~~~~g~~~gl~~~~~~lg~~i 572 (615)
..-+++..|...|+-.+-.+++-+.
T Consensus 121 aSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 121 ASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cccCCCCCCCcccHHHHHHhHHHHH
Confidence 3446777899999888777776554
No 331
>PRK02237 hypothetical protein; Provisional
Probab=34.58 E-value=96 Score=25.90 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHHHHhh
Q 007159 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (615)
Q Consensus 242 ~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l~~~~ 292 (615)
...|=+.+.|.-.+++.++++++..|+..+-+.=.+|..+..++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 458899999999999999999999999887777667777666666554443
No 332
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=31.66 E-value=2.4e+02 Score=28.13 Aligned_cols=17 Identities=12% Similarity=0.258 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHhhh
Q 007159 277 FGVIWWSVATVLTPVAA 293 (615)
Q Consensus 277 ~~~~l~~i~~~l~~~~~ 293 (615)
.+.++++++.++..+..
T Consensus 4 ~~~~~~~~~s~~~~l~~ 20 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLF 20 (284)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33444434444444333
No 333
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=31.36 E-value=4.7e+02 Score=24.96 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=18.7
Q ss_pred HHHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHH
Q 007159 343 YLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWF 377 (615)
Q Consensus 343 ~lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 377 (615)
.++.++|..++.++....+-++.-...+++.++..
T Consensus 70 ~~~~~~g~~iG~~l~~~l~~~~l~~~~~~~ll~~~ 104 (240)
T PF01925_consen 70 IIGALIGVVIGAWLLSLLPDDILKLIFGLFLLLLA 104 (240)
T ss_pred hhHhHHHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Confidence 35566666667776665554444444444443333
No 334
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=31.17 E-value=2.4e+02 Score=28.16 Aligned_cols=11 Identities=27% Similarity=0.806 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 007159 597 YIIGTLVWNLF 607 (615)
Q Consensus 597 ~l~~~l~~~~~ 607 (615)
..+..++++.+
T Consensus 85 y~~lsl~~~~l 95 (284)
T PF12805_consen 85 YLLLSLLWWPL 95 (284)
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 335
>COG3619 Predicted membrane protein [Function unknown]
Probab=29.70 E-value=5.2e+02 Score=24.94 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHhhheeccCChhHHHHHHHHHH
Q 007159 560 GLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 597 (615)
Q Consensus 560 gl~~~~~~lg~~igp~l~G~l~~~~g~~~~f~~~~~~~ 597 (615)
.......-++..+|...++.+....|-...+.....++
T Consensus 171 ~~~~~~~il~f~~GAi~g~ll~~~~g~~al~~~~~~i~ 208 (226)
T COG3619 171 WLIYLSLILSFIVGAICGALLTLFFGLKALWVVAALIL 208 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34444455566666666666655555444444333333
No 336
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=29.63 E-value=8.7e+02 Score=28.01 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=10.3
Q ss_pred cCChhHHHHHHHHHHHHHHH
Q 007159 583 RGSWDDVFKVAVVLYIIGTL 602 (615)
Q Consensus 583 ~~g~~~~f~~~~~~~l~~~l 602 (615)
.++|..++++.+.+.+..++
T Consensus 290 ~ys~~L~li~l~~~~l~~l~ 309 (709)
T COG2274 290 LYSWKLTLIVLAAIPLNVLI 309 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45666666555544444433
No 337
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=29.22 E-value=5.4e+02 Score=26.61 Aligned_cols=20 Identities=15% Similarity=0.026 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 007159 471 LTMAVFANMGGWIADTLVSK 490 (615)
Q Consensus 471 i~~~ig~~l~g~l~dr~g~~ 490 (615)
...+...++.+.+.+++|.|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhH
Confidence 33445555666888899888
No 338
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=27.84 E-value=6.5e+02 Score=26.95 Aligned_cols=48 Identities=10% Similarity=0.071 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW 281 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l 281 (615)
+-.+.+...+.+.|+.++.....+.+.+ .=-+++++|--..++++.+.
T Consensus 314 lfE~~~~~~iHpiQY~LVGlAl~lFYlL----LLSlSEhi~F~~AYliAa~a 361 (430)
T PF06123_consen 314 LFELLSKLRIHPIQYLLVGLALVLFYLL----LLSLSEHIGFNLAYLIAALA 361 (430)
T ss_pred HHHHHhcCcccHHHHHHHHHHHHHHHHH----HHHHHhhhchHHHHHHHHHH
Confidence 3455566667777777665554444433 23467777766665555443
No 339
>PRK11715 inner membrane protein; Provisional
Probab=27.38 E-value=6.3e+02 Score=27.10 Aligned_cols=47 Identities=13% Similarity=0.141 Sum_probs=26.2
Q ss_pred HHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhhHHhhhhcCCchHHHHHHH
Q 007159 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVI 280 (615)
Q Consensus 230 ~~~i~~~~g~s~~~~g~i~s~~~l~~~l~~~~~G~l~Dr~Grk~~l~~~~~ 280 (615)
+-.+.+...+.+.|+.++.....+.|.+. =-+++++|--..++++.+
T Consensus 320 lfE~~~~~~iHpiQYlLVGlAl~lFYLLL----LSlSEHigF~~AYliAa~ 366 (436)
T PRK11715 320 LFELLKKLRIHPVQYLLVGLALVLFYLLL----LSLSEHIGFTLAYLIAAL 366 (436)
T ss_pred HHHHhcCceecHHHHHHHHHHHHHHHHHH----HHHHhhhchHHHHHHHHH
Confidence 34555666667777766655444444332 345677776555554443
No 340
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=26.82 E-value=68 Score=31.68 Aligned_cols=29 Identities=7% Similarity=0.125 Sum_probs=15.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCc
Q 007159 584 GSWDDVFKVAVVLYIIGTLVWNLFATGER 612 (615)
Q Consensus 584 ~g~~~~f~~~~~~~l~~~l~~~~~~~~~k 612 (615)
..|..+-++..++.++..+++.|++|++|
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK 287 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRK 287 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34555555555555555556555555544
No 341
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.32 E-value=2.9e+02 Score=22.82 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=15.8
Q ss_pred HHHHHHHhhhHhhhhcCCC----chHHHHHHHHHHH
Q 007159 343 YLGSVTGLAVSPILIQKFG----WPSVFYSFGSLGS 374 (615)
Q Consensus 343 ~lG~~ig~~l~~~l~~~~g----w~~~f~~~~~~~~ 374 (615)
.+..++|..+|-++-+.++ |..+|++++++..
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 3444455555556656665 3444444444433
No 342
>COG1288 Predicted membrane protein [Function unknown]
Probab=26.16 E-value=8.3e+02 Score=26.16 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=19.1
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHHhh
Q 007159 357 IQKFGWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 357 ~~~~gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
.+-.+||...|+...+..+..+.++..
T Consensus 213 ~sG~~~Riv~~v~~~~~~i~y~~~Ya~ 239 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISIIYVYWYAS 239 (481)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 455789999998877776666655543
No 343
>PRK11715 inner membrane protein; Provisional
Probab=26.03 E-value=8.4e+02 Score=26.17 Aligned_cols=12 Identities=8% Similarity=0.036 Sum_probs=5.6
Q ss_pred HHHHhhhccccH
Q 007159 483 IADTLVSKGLSI 494 (615)
Q Consensus 483 l~dr~g~~~~~~ 494 (615)
+.+.+.+.++..
T Consensus 320 lfE~~~~~~iHp 331 (436)
T PRK11715 320 LFELLKKLRIHP 331 (436)
T ss_pred HHHHhcCceecH
Confidence 444444554443
No 344
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=25.93 E-value=8.4e+02 Score=26.13 Aligned_cols=12 Identities=33% Similarity=0.321 Sum_probs=5.7
Q ss_pred cccccCCcceee
Q 007159 109 PWKRTNNKCECY 120 (615)
Q Consensus 109 ~~~~~~~~~~~~ 120 (615)
.+.++-.+...|
T Consensus 102 ~r~RGIy~~~VY 113 (430)
T PF06123_consen 102 ERKRGIYKAPVY 113 (430)
T ss_pred eeeccceEeeEe
Confidence 344444455555
No 345
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=25.86 E-value=2.4e+02 Score=19.74 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=17.5
Q ss_pred HHHHHHhhhHhhhhcCCCchHHHHHHHHHHHHHHHHHH
Q 007159 344 LGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (615)
Q Consensus 344 lG~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 381 (615)
+|..+|..+.+.+-...++.+.-++.+++..+..+..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 34444444443332233345555556666555554444
No 346
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=25.52 E-value=9.1e+02 Score=26.38 Aligned_cols=53 Identities=9% Similarity=0.054 Sum_probs=39.0
Q ss_pred chhhHHHHHHHHHHHHH-HHHHHHHhhheeccCChhHHHHHHHHHHHHHHHHHH
Q 007159 553 RYAGVLLGLSNTAGVLA-GVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 605 (615)
Q Consensus 553 ~~~g~~~gl~~~~~~lg-~~igp~l~G~l~~~~g~~~~f~~~~~~~l~~~l~~~ 605 (615)
+.....+|-++...++- ..+.-.++|-++...||-..-.+.-++.+++.++++
T Consensus 317 ~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 317 NEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 44666777776666666 566777888899999999888887777777765544
No 347
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.40 E-value=33 Score=29.83 Aligned_cols=13 Identities=8% Similarity=0.140 Sum_probs=6.0
Q ss_pred hHHHHHHHHHHHH
Q 007159 363 PSVFYSFGSLGSI 375 (615)
Q Consensus 363 ~~~f~~~~~~~~~ 375 (615)
||+++++.+++++
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 4555544444333
No 348
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=25.32 E-value=8.8e+02 Score=26.14 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007159 433 HFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (615)
Q Consensus 433 ~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~ 490 (615)
.+-..+..++-....|...-...|++.++...+.+.-.+...++.++--....+.|.+
T Consensus 22 glQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~ 79 (451)
T COG2233 22 GLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSG 79 (451)
T ss_pred HHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccC
Confidence 3344445555666778888888999999999998888888888887765533333334
No 349
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=25.25 E-value=6.2e+02 Score=24.38 Aligned_cols=37 Identities=16% Similarity=0.115 Sum_probs=24.2
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007159 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (615)
Q Consensus 453 ~~~g~s~~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~ 492 (615)
+..+++..+.|..........+ +....+.+|.+.++.
T Consensus 124 ~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p 160 (224)
T PF09930_consen 124 PSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYP 160 (224)
T ss_pred HhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCc
Confidence 4468888888887655444443 566677777775543
No 350
>PRK02237 hypothetical protein; Provisional
Probab=25.00 E-value=3.3e+02 Score=22.85 Aligned_cols=36 Identities=8% Similarity=-0.047 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHH
Q 007159 460 TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (615)
Q Consensus 460 ~~~g~~~~~~~i~~~ig~~l~g~l~dr~g~~~~~~~ 495 (615)
...|-.++.++...++.+++.++..|+....+.-..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~i 91 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWI 91 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHH
Confidence 347888899999999999999999999877655443
No 351
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=24.68 E-value=8.2e+02 Score=25.57 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=19.4
Q ss_pred ccchhhHHHHHHH-HHHHHHHHHhhhHhhhhcCCCchH
Q 007159 328 VSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWPS 364 (615)
Q Consensus 328 ~~~r~~~~~~~~~-~~~lG~~ig~~l~~~l~~~~gw~~ 364 (615)
|.+|...++.... ..+.|.++||.++ ..+||-.
T Consensus 51 P~~~~vlfghhf~sIAGaGPI~GPi~a----a~~GwlP 84 (376)
T PF02554_consen 51 PTNKWVLFGHHFASIAGAGPIVGPILA----AQFGWLP 84 (376)
T ss_pred CCchHHhhHHHHHHHhccccchHHHHH----HHhcchH
Confidence 3445566666544 4456666666665 3478863
No 352
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=24.56 E-value=2.7e+02 Score=19.87 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhHHhhhh-cCCchHHHHHHHHHHH
Q 007159 250 SFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSV 284 (615)
Q Consensus 250 ~~~l~~~l~~~~~G~l~Dr-~Grk~~l~~~~~l~~i 284 (615)
......++.....|+..|+ ++.++...+..++.++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3445556666677888886 5665655544444443
No 353
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.52 E-value=5.7e+02 Score=29.43 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=27.3
Q ss_pred HHhhhh----cCCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhh
Q 007159 263 GIWADK----FGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (615)
Q Consensus 263 G~l~Dr----~Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~ 311 (615)
+-++|. -||.+-++++.+++.++.+...+...+ .+++....++.+++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-PWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHH
Confidence 555554 245566778888888877776665532 233444444444443
No 354
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=23.87 E-value=7.2e+02 Score=28.63 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=28.9
Q ss_pred hHHhhhhc----CCchHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHhhhc
Q 007159 262 GGIWADKF----GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 312 (615)
Q Consensus 262 ~G~l~Dr~----Grk~~l~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~~~~ 312 (615)
++-+.|.= ||.+-++++.++++++.+...+...+ .+++....++.+++.+
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~-p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK-PWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHH
Confidence 34555543 45677788888888888877766532 2334444444444433
No 355
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=23.58 E-value=6.9e+02 Score=24.32 Aligned_cols=25 Identities=24% Similarity=0.355 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhhh
Q 007159 332 SRSLAFVYSGMYLGSVTGLAVSPIL 356 (615)
Q Consensus 332 ~~~~~~~~~~~~lG~~ig~~l~~~l 356 (615)
.+.....-.+..+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555566666665554433
No 356
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=23.11 E-value=8e+02 Score=24.88 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=54.7
Q ss_pred HHHHHHHHhhHHhhhhcCCchHHHHHHHHHHHHHHH-HHhhhccChHHHHHHHHHHHhhhcchhhHHHHHhhhcccccch
Q 007159 253 WGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 331 (615)
Q Consensus 253 l~~~l~~~~~G~l~Dr~Grk~~l~~~~~l~~i~~~l-~~~~~~~~~~~ll~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 331 (615)
..-.+..-+++.++||-|.-.+-+=|..+.+..... .... +.+.|.-+.. |...+.......++++.....++-
T Consensus 18 atPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~-t~spw~gl~~----a~l~g~l~~ll~a~~ti~l~~nqi 92 (304)
T COG1079 18 ATPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYG-TGSPWLGLLA----AALVGALFGLLHAFLTIKLRANQI 92 (304)
T ss_pred HHHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHc-cccHHHHHHH----HHHHHHHHHHHHHHHHHhhccccc
Confidence 444556667788899988765544443333332221 1221 2244433333 333444455566666766666777
Q ss_pred hhHHHHHHHHHHHHHHHHhhhHhh
Q 007159 332 SRSLAFVYSGMYLGSVTGLAVSPI 355 (615)
Q Consensus 332 ~~~~~~~~~~~~lG~~ig~~l~~~ 355 (615)
-...++...+.++...++..+.+.
T Consensus 93 isG~alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 93 ISGLALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcc
Confidence 677777777777777666555443
No 357
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=22.40 E-value=7.6e+02 Score=24.38 Aligned_cols=23 Identities=22% Similarity=0.089 Sum_probs=12.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHhh
Q 007159 361 GWPSVFYSFGSLGSIWFALWLKK 383 (615)
Q Consensus 361 gw~~~f~~~~~~~~~~~~~~~~~ 383 (615)
.=++.+++.+++.++..+-.+..
T Consensus 128 pr~~T~~~~t~LF~iFGlkmL~e 150 (294)
T KOG2881|consen 128 PRKYTYYLATALFLIFGLKMLKE 150 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 33566666666555555444433
No 358
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=21.76 E-value=3e+02 Score=24.58 Aligned_cols=25 Identities=16% Similarity=0.508 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhHHhhhhcCCch
Q 007159 249 SSFFWGYLLTQIVGGIWADKFGGKP 273 (615)
Q Consensus 249 s~~~l~~~l~~~~~G~l~Dr~Grk~ 273 (615)
.-|.+++.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3677888899999999999988764
No 359
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=20.78 E-value=3.3e+02 Score=25.30 Aligned_cols=23 Identities=17% Similarity=0.551 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhHHhhhhcCC
Q 007159 249 SSFFWGYLLTQIVGGIWADKFGG 271 (615)
Q Consensus 249 s~~~l~~~l~~~~~G~l~Dr~Gr 271 (615)
.-|.+++.+.+.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778899999999999999875
No 360
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=20.37 E-value=2.8e+02 Score=32.65 Aligned_cols=10 Identities=10% Similarity=0.321 Sum_probs=4.3
Q ss_pred hHHHHHHHHH
Q 007159 244 VGLIQSSFFW 253 (615)
Q Consensus 244 ~g~i~s~~~l 253 (615)
++++.++..+
T Consensus 936 ltFi~SIiwI 945 (1096)
T TIGR00927 936 ITFLGSIMWI 945 (1096)
T ss_pred ehHHHHHHHH
Confidence 3444444433
No 361
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.15 E-value=1.1e+03 Score=25.46 Aligned_cols=53 Identities=9% Similarity=-0.100 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh-heeccCChhHHHHHHHHHHHHHHHHHHHH
Q 007159 555 AGVLLGLSNTAGVLAGVFGTAATG-YILQRGSWDDVFKVAVVLYIIGTLVWNLF 607 (615)
Q Consensus 555 ~g~~~gl~~~~~~lg~~igp~l~G-~l~~~~g~~~~f~~~~~~~l~~~l~~~~~ 607 (615)
.|..++++.+.+.++-++.=.+=. ...-..+.+..-+++.++.+++++++++.
T Consensus 222 ~G~lf~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 222 HGRLFGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred CchHHHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHh
Confidence 488888887777777765443311 00001234444455555555555444333
No 362
>COG1288 Predicted membrane protein [Function unknown]
Probab=20.09 E-value=1.1e+03 Score=25.32 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHh------hhcchhhHHHHHhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007159 276 GFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGI------GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (615)
Q Consensus 276 ~~~~~l~~i~~~l~~~~~~~~~~~ll~~r~l~G~------~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ig 349 (615)
+.-.++.....++..+....-.+.+++...+.++ |.+....+.++=++|... -.|..+.--++.+.++-.++.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vg-v~RqvvV~Afq~g~G~~n~I~ 436 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVG-VPRQVVVLAFQLGDGFSNIIA 436 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcC-CCHHHhhhhhhhcchhhheec
Confidence 3344455555555544442212334444455554 333344445555667763 345555555666666666665
Q ss_pred hh
Q 007159 350 LA 351 (615)
Q Consensus 350 ~~ 351 (615)
|-
T Consensus 437 PT 438 (481)
T COG1288 437 PT 438 (481)
T ss_pred Cc
Confidence 54
No 363
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=20.05 E-value=6.8e+02 Score=22.89 Aligned_cols=9 Identities=11% Similarity=0.150 Sum_probs=3.5
Q ss_pred HHHHHHhhh
Q 007159 481 GWIADTLVS 489 (615)
Q Consensus 481 g~l~dr~g~ 489 (615)
+++.+|+..
T Consensus 158 ~~~~~~~~~ 166 (191)
T PF01810_consen 158 SRLRRKFSS 166 (191)
T ss_pred HHHHHHHhh
Confidence 334444433
Done!