Query 007161
Match_columns 615
No_of_seqs 190 out of 824
Neff 4.9
Searched_HMMs 46136
Date Thu Mar 28 19:46:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007161.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007161hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 3E-206 6E-211 1714.2 53.2 612 1-615 165-785 (785)
2 PLN00149 potassium transporter 100.0 1E-204 2E-209 1703.0 53.2 606 1-615 165-779 (779)
3 PLN00151 potassium transporter 100.0 1E-203 2E-208 1692.2 52.7 600 1-615 242-852 (852)
4 PLN00150 potassium ion transpo 100.0 4E-203 8E-208 1688.2 52.9 594 1-615 182-779 (779)
5 TIGR00794 kup potassium uptake 100.0 4E-183 8E-188 1520.1 49.4 548 1-615 136-688 (688)
6 PRK10745 trkD potassium transp 100.0 5E-166 1E-170 1365.1 44.2 504 1-615 112-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 3E-158 6E-163 1293.7 30.9 430 1-434 101-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-151 4E-156 1222.7 41.1 506 1-614 117-626 (627)
9 TIGR00911 2A0308 L-type amino 89.5 0.47 1E-05 53.0 5.2 86 30-119 166-255 (501)
10 TIGR00909 2A0306 amino acid tr 76.5 13 0.00029 40.3 9.4 168 31-211 135-317 (429)
11 COG0531 PotE Amino acid transp 75.0 13 0.00028 40.2 8.8 179 28-210 133-324 (466)
12 TIGR00907 2A0304 amino acid pe 71.7 12 0.00025 41.7 7.6 25 30-54 144-168 (482)
13 TIGR03813 put_Glu_GABA_T putat 67.0 28 0.0006 38.8 9.2 19 310-328 434-452 (474)
14 PRK10655 potE putrescine trans 67.0 47 0.001 36.4 10.9 43 31-73 125-170 (438)
15 TIGR00930 2a30 K-Cl cotranspor 63.7 35 0.00077 42.1 10.0 25 29-53 203-227 (953)
16 PRK10435 cadB lysine/cadaverin 62.8 34 0.00073 37.7 8.8 23 32-54 124-146 (435)
17 TIGR00906 2A0303 cationic amin 61.0 70 0.0015 36.9 11.2 45 29-73 161-208 (557)
18 PRK15049 L-asparagine permease 58.0 42 0.0009 38.0 8.7 41 32-72 147-190 (499)
19 PF13520 AA_permease_2: Amino 55.5 25 0.00054 38.0 6.2 222 29-266 118-366 (426)
20 PF06570 DUF1129: Protein of u 54.4 46 0.001 33.3 7.4 21 309-329 179-199 (206)
21 KOG3145 Cystine transporter Cy 54.3 16 0.00034 39.5 4.1 88 32-130 212-339 (372)
22 TIGR03810 arg_ornith_anti argi 52.1 98 0.0021 34.4 10.3 44 168-211 274-317 (468)
23 KOG3643 GABA receptor [Signal 48.2 19 0.00041 40.6 3.9 91 204-298 225-325 (459)
24 PF14362 DUF4407: Domain of un 47.0 95 0.0021 32.7 8.8 53 251-303 15-71 (301)
25 COG4059 MtrE Tetrahydromethano 45.9 19 0.00042 37.3 3.2 29 307-335 259-287 (304)
26 TIGR00908 2A0305 ethanolamine 43.9 68 0.0015 35.2 7.3 25 31-55 123-147 (442)
27 PRK10580 proY putative proline 42.9 1.1E+02 0.0024 33.9 8.9 24 309-332 424-447 (457)
28 KOG4742 Predicted chitinase [G 40.7 13 0.00027 39.7 1.0 33 122-163 172-210 (286)
29 PRK11021 putative transporter; 39.1 3.5E+02 0.0076 29.4 11.9 27 30-56 116-142 (410)
30 TIGR00910 2A0307_GadC glutamat 38.7 1.6E+02 0.0035 33.4 9.5 44 106-149 201-246 (507)
31 PRK11357 frlA putative fructos 38.6 1.3E+02 0.0027 33.2 8.4 44 31-74 129-175 (445)
32 PRK10644 arginine:agmatin anti 36.7 68 0.0015 35.3 6.0 23 32-54 128-150 (445)
33 PRK11387 S-methylmethionine tr 36.0 1E+02 0.0022 34.4 7.2 21 33-53 133-153 (471)
34 PRK10746 putative transport pr 33.9 1.9E+02 0.0041 32.4 8.9 26 310-335 427-452 (461)
35 PRK10249 phenylalanine transpo 32.8 1.6E+02 0.0036 32.7 8.2 101 32-134 138-246 (458)
36 PRK10238 aromatic amino acid t 30.6 1.6E+02 0.0035 32.8 7.7 113 32-148 129-250 (456)
37 TIGR00905 2A0302 transporter, 29.3 1.4E+02 0.0029 33.4 6.9 24 31-54 131-154 (473)
38 TIGR01773 GABAperm gamma-amino 29.1 5E+02 0.011 28.6 11.1 46 31-76 128-176 (452)
39 TIGR03428 ureacarb_perm permea 24.2 1E+03 0.022 26.5 12.8 25 30-54 145-169 (475)
40 PF06155 DUF971: Protein of un 22.9 47 0.001 28.8 1.4 15 584-598 25-39 (89)
41 COG2179 Predicted hydrolase of 22.6 19 0.00041 35.9 -1.2 70 536-610 44-117 (175)
42 PF05545 FixQ: Cbb3-type cytoc 22.5 71 0.0015 24.9 2.2 29 318-346 19-47 (49)
43 cd05900 Ig_Aggrecan Immunoglob 21.1 1.1E+02 0.0024 27.9 3.5 28 409-436 74-101 (112)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.8e-206 Score=1714.24 Aligned_cols=612 Identities=85% Similarity=1.378 Sum_probs=554.0
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|+||||+|||||| |||||+..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 165 m~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~ 244 (785)
T PLN00148 165 MVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIH 244 (785)
T ss_pred HHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999 999999999999899999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 245 ~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~ 324 (785)
T PLN00148 245 WNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKN 324 (785)
T ss_pred cCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 325 p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~ 404 (785)
T PLN00148 325 IPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMIL 404 (785)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 405 ~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~i 484 (785)
T PLN00148 405 TLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVL 484 (785)
T ss_pred HHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|++||||++++++++.+|+++++++.++.++.++.||||+|+|||++.+|+|++|.||++|+|++||++||+|
T Consensus 485 a~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ 564 (785)
T PLN00148 485 SAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 564 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCC-CCCcccCCccc
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFS-SSESSLDGRMA 475 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~~-~~~~~~~~~~~ 475 (615)
||++|+|+||++|||+++|+++++||+|||++||||||.+++++|||++|+++|++|||+|+.+.+.. .+.++.|++++
T Consensus 565 ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~ 644 (785)
T PLN00148 565 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMA 644 (785)
T ss_pred EEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998542110 00111244555
Q ss_pred eeeccccccCcccccccccccC--CCCccccccccccccccccccccCCc--ccccceeecCCCCCCCChhHHHHHHHHH
Q 007161 476 VISTRNVESNTNLIISVQEEDI--GSSSSIQSSKSLTLQSLQSVFDEDNP--VRRRQVRFQLPSDPGMDPAVREELMDLI 551 (615)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 551 (615)
++++.+....+. ... ++++ .+.....++++...+..++.++.+.+ .+++++++..+++.+.+++++||+++|+
T Consensus 645 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~ 721 (785)
T PLN00148 645 VISTRDVQSSSL-LMV--SEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLI 721 (785)
T ss_pred cccccccccccc-ccc--ccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHH
Confidence 554322111000 000 0000 00000001111122223323332222 3566788877665566789999999999
Q ss_pred HHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 552 QAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 552 ~A~eaGVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
+|||+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 722 ~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 722 EAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.1e-204 Score=1702.98 Aligned_cols=606 Identities=58% Similarity=1.049 Sum_probs=545.9
Q ss_pred Cccccceecccce----eccceeccCCCCC-CeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTD-GELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVI 75 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~-~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~ 75 (615)
|+||||+|||||| |||||+..|...+ ..||+|||+||++||++||+||+|||++|||||++||++||++|+|||+
T Consensus 165 m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~ 244 (779)
T PLN00149 165 MVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIF 244 (779)
T ss_pred HHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 7999999999999 9999999976444 4448999999999999999999999999999999999999999999999
Q ss_pred ccCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhcc
Q 007161 76 HWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSK 155 (615)
Q Consensus 76 ~~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~ 155 (615)
+|||+|||||||+||++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++
T Consensus 245 ~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~ 324 (779)
T PLN00149 245 HWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSK 324 (779)
T ss_pred hcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc---cccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHH
Q 007161 156 NLD---KIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWI 232 (615)
Q Consensus 156 ~p~---~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~ 232 (615)
||+ +++||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+
T Consensus 325 ~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~ 404 (779)
T PLN00149 325 HHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWT 404 (779)
T ss_pred CcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHH
Confidence 996 56679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcch
Q 007161 233 LMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWV 312 (615)
Q Consensus 233 Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~ 312 (615)
||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+
T Consensus 405 Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~ 484 (779)
T PLN00149 405 LMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWV 484 (779)
T ss_pred HHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEE
Q 007161 313 PLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVL 392 (615)
Q Consensus 313 pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~ 392 (615)
||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|+|++||++
T Consensus 485 pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~ 564 (779)
T PLN00149 485 PIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVL 564 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceE
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred EEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcC-CCCCcccC
Q 007161 393 VFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQF-SSSESSLD 471 (615)
Q Consensus 393 vfv~i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~-~~~~~~~~ 471 (615)
||+|||++|+|+||++|||+++|++++++|+|||++||||||.+++++|||++|+++|++|||+|+.+.+. .++.+.+|
T Consensus 565 Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~ 644 (779)
T PLN00149 565 VFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGED 644 (779)
T ss_pred EEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999754221 11111124
Q ss_pred CccceeeccccccCcccccccccccCCCCccccccccccccccccccccCCcccccceeecCCCCCCCChhHHHHHHHHH
Q 007161 472 GRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLI 551 (615)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 551 (615)
++++++++.+... ++.... ++ .+. +..+.+.+.+++.++. + .+.+++++++..+++.+.+++++||+++|+
T Consensus 645 ~~~~~~~~~~~~~-~~~~~~--~~--~~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 715 (779)
T PLN00149 645 ERMTVVGTCSTHL-EGIQLR--ED--DSD-KQEPAGTSELREIRSP-P--VSRPKKRVRFVVPESPKIDRGAREELQELM 715 (779)
T ss_pred ccccccccccccc-cccccc--cc--ccc-ccccccccccccccCc-c--ccCcccceeeccccccccchhHHHHHHHHH
Confidence 5566654332111 000000 00 000 0000001111111111 1 112346788877766667789999999999
Q ss_pred HHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 552 QAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 552 ~A~eaGVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
+|||+||+||+||++|||||+|+|+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 716 ~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 716 EAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=1.1e-203 Score=1692.17 Aligned_cols=600 Identities=45% Similarity=0.858 Sum_probs=537.1
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|+||||+|||||| |||||+..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 242 mviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~ 321 (852)
T PLN00151 242 MVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVK 321 (852)
T ss_pred HHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHh
Confidence 7999999999999 999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 322 ~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~ 401 (852)
T PLN00151 322 YDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKN 401 (852)
T ss_pred cCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||+++|+|++||+|++||+||||||||+|||+|||++||++||||||+||+|||++++||||||+|||+||++
T Consensus 402 p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~ 481 (852)
T PLN00151 402 PDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVM 481 (852)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|++||++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 482 ~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~l 561 (852)
T PLN00151 482 CLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVF 561 (852)
T ss_pred HHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|++||||+++||+++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|+|++||++||||
T Consensus 562 a~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ 641 (852)
T PLN00151 562 ASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVC 641 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccC-CchhHHHHHHHHHHHHHhhhccCCcCCC--CCcccCC-
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQR-DDGDFENQLIQSIAEFIQMEAEEPQFSS--SESSLDG- 472 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~-~~~~f~~~l~~~l~~fI~~e~~~~~~~~--~~~~~~~- 472 (615)
||++|+|+||++|||+++|++|++|++|||++||||||.++ +++|||++|+++|++|||+|+.+..... +.+.+++
T Consensus 642 ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~ 721 (852)
T PLN00151 642 IKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDED 721 (852)
T ss_pred EEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccc
Confidence 99999999999999999999999999999999999999976 8899999999999999999975321101 1110011
Q ss_pred --ccceeeccccccCcccccccccccCCCCcccccccccccc-ccccccccCCcccccceeecCCCCCCCChhHHHHHHH
Q 007161 473 --RMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQ-SLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMD 549 (615)
Q Consensus 473 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~ 549 (615)
+++...+.++.. ....+ . ...... .+++...+ +..+. +.+.+. .+++++ ++.+++++||+++
T Consensus 722 ~~~~~~~~~~~~~~--~~~~~---~--~~~~~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~~~El~~ 786 (852)
T PLN00151 722 SVTSSRVLIAPNGS--VYSLG---V--PLLADY-RLTSKPIPEASTSE-EVSPVL-PSSSMS-----SDEDQSLEYELSF 786 (852)
T ss_pred cccccccccCCCcc--ccccc---c--cccccc-cccccccccccccc-cccccc-cccccc-----cccCccHHHHHHH
Confidence 122211111000 00000 0 000000 00000000 00000 101110 112222 2235789999999
Q ss_pred HHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 550 LIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 550 L~~A~eaGVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
|++|||+||+||+||++|||||+|+|+||++||++|+|||||||+|.++|+|||++|+||||+|||
T Consensus 787 l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 787 IREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3.5e-203 Score=1688.21 Aligned_cols=594 Identities=53% Similarity=0.976 Sum_probs=537.5
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|+||||+|||||| |||||+..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 182 m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~ 261 (779)
T PLN00150 182 MVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIK 261 (779)
T ss_pred HHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHh
Confidence 7999999999999 999999999999899999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 262 ~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~ 341 (779)
T PLN00150 262 WDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKH 341 (779)
T ss_pred cCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 342 p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~ 421 (779)
T PLN00150 342 MEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVL 421 (779)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 422 ~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 501 (779)
T PLN00150 422 CLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVI 501 (779)
T ss_pred HHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|+|++||++||+|
T Consensus 502 a~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~ 581 (779)
T PLN00150 502 AAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVC 581 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 476 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~~~~~~~~~~~~~~ 476 (615)
||++|+|+||++|||+++|+++++|++|||++||||||.+++++|||++|+++|++|||+|+.+..... +++++
T Consensus 582 i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~------~~~~~ 655 (779)
T PLN00150 582 IKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDL------ESMAA 655 (779)
T ss_pred EEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhcccccc------ccccc
Confidence 999999999999999999999999999999999999999999999999999999999999975321110 11111
Q ss_pred eeccccccCcccccccccccCCCCccccccccccccccccccccCCcccccceeecCCCCCCCChhHHHHHHHHHHHHHc
Q 007161 477 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKEA 556 (615)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ea 556 (615)
..+.++.. . ++ ++......++.+...++.++.++.+.+. ++++++ ++.+++++||+++|++|||+
T Consensus 656 ~~~~~~~~------~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~v~eEl~~L~~A~ea 720 (779)
T PLN00150 656 SWTPEELM------G--EG-NSVGSGLFTQYDQSDINFATSQEWKRPS-SQEDSV-----SGHSSDTQDEVAFLNKCKEA 720 (779)
T ss_pred cccccccc------c--cC-Cccccccccccccccccccccccccccc-cccccc-----ccccccHHHHHHHHHHHHHc
Confidence 11110000 0 00 0000000000000001111111111111 122222 22357899999999999999
Q ss_pred CcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 557 GIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 557 GVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||+||+||||+|||
T Consensus 721 GVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 721 GVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred CcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=3.6e-183 Score=1520.13 Aligned_cols=548 Identities=45% Similarity=0.867 Sum_probs=521.2
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|++|||+|||||| ||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 136 l~~gDgviTPAiSVLSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~ 215 (688)
T TIGR00794 136 MVMGDGVLTPAISVLSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVK 215 (688)
T ss_pred HHhcccccccchhhhhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999 999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
|||+||||+||+||++||.+||..||.+||||+||+||+||||||||||||+|||+||+++|||||+|||+||||||++|
T Consensus 216 ~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~ 295 (688)
T TIGR00794 216 FNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKH 295 (688)
T ss_pred cCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 296 p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~ 375 (688)
T TIGR00794 296 PEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLG 375 (688)
T ss_pred cchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|+++|++||||++||+|||+||++||++||+|++++|+.+||||++++++|+++|+.+|+.|||||+.|++||||+||++
T Consensus 376 ~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~i 455 (688)
T TIGR00794 376 VIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSL 455 (688)
T ss_pred HHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHh-cCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLG-LGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFV 395 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv 395 (615)
|++++++|++|+||++++++++.++++|++++.+ +.++.+++|+||+|+|||++++++|+++.||++|||++||++||+
T Consensus 456 a~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfl 535 (688)
T TIGR00794 456 SGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFL 535 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEE
Confidence 9999999999999999999999999999999977 555555689999999999999999999999999999999999999
Q ss_pred EEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccc
Q 007161 396 CVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMA 475 (615)
Q Consensus 396 ~i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~~~~~~~~~~~~~ 475 (615)
||+++|+|+||++|||+++++++++ |+|||++||||||+++.+++|+++++++|++||+++..+ +..
T Consensus 536 tv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~-----~~~------- 602 (688)
T TIGR00794 536 SLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGF-----NLN------- 602 (688)
T ss_pred EEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhh-----ccc-------
Confidence 9999999999999999999999855 899999999999999999999999999999999986431 000
Q ss_pred eeeccccccCcccccccccccCCCCccccccccccccccccccccCCcccccceeecCCCCCCCChhHHHHHHHHHHHHH
Q 007161 476 VISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKE 555 (615)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e 555 (615)
+. + .. .+. ++ +.+.+||++++++++|
T Consensus 603 ------------------~~--~---~~--------------~~~---------~~--------~~~~eee~~~~~~~~~ 628 (688)
T TIGR00794 603 ------------------NL--E---EL--------------SDK---------RC--------RMPIEEIFENAMETKE 628 (688)
T ss_pred ------------------cc--c---cc--------------ccc---------cc--------ccchHHHHHHHHHHhh
Confidence 00 0 00 000 00 0125799999999999
Q ss_pred cCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 556 AGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 556 aGVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
+||+|++||++++++++|+++||..||++|.|||||||++...++|||+|++||||.||+
T Consensus 629 ~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 629 HGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred cCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999999999999999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=5e-166 Score=1365.06 Aligned_cols=504 Identities=30% Similarity=0.567 Sum_probs=477.5
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|++|||+|||||| |||||+..|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 112 l~~gDgvITPAISVLSAVEGL~v~~p~l~~-~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~ 190 (622)
T PRK10745 112 FFYGEVVITPAISVMSAIEGLEIVAPQLDT-YIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA 190 (622)
T ss_pred HHhhccccchhHHHHHHhhcccccCCCCCC-ccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999 9999999999965 8999999999999999999999999999999999999999999999998
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
||+||+|+||+||++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++|
T Consensus 191 -~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~ 269 (622)
T PRK10745 191 -NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKN 269 (622)
T ss_pred -CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||.++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 270 p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~ 349 (622)
T PRK10745 270 PEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVA 349 (622)
T ss_pred chhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|++++++||||++||+|||+||++||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++
T Consensus 350 ~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~i 429 (622)
T PRK10745 350 VVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSL 429 (622)
T ss_pred HHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|++|++|++++++++.+++++++++++..++.++.||||+|+|+|+..+++|+++.|++||||++||++||+|
T Consensus 430 a~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~ 509 (622)
T PRK10745 430 GLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLT 509 (622)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEE
Confidence 99999999999999999999999999999999888877777799999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 476 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~~~~~~~~~~~~~~ 476 (615)
|+++|+|+|+++||++++++++ ++|||++||||||+++.++.++ .. +.+..
T Consensus 510 v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~-----~~----~~~g~----------------- 560 (622)
T PRK10745 510 LRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFH-----RC----GLEGL----------------- 560 (622)
T ss_pred EEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHH-----HH----HhCCC-----------------
Confidence 9999999999999999999996 6999999999999987643331 10 00000
Q ss_pred eeccccccCcccccccccccCCCCccccccccccccccccccccCCcccccceeecCCCCCCCChhHHHHHHHHHHHHHc
Q 007161 477 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKEA 556 (615)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ea 556 (615)
+ ++ -.
T Consensus 561 ------------------~-----------------------------------~~----------------------~~ 565 (622)
T PRK10745 561 ------------------S-----------------------------------CR----------------------MM 565 (622)
T ss_pred ------------------C-----------------------------------CC----------------------cc
Confidence 0 00 01
Q ss_pred CcEEEeeceEEEecCCCc---hHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007161 557 GIAYIMGHSYVKARRSSS---FVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 615 (615)
Q Consensus 557 GVvYIlG~~~v~ar~~Ss---~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 615 (615)
.++|.+||+.+...++++ |-|| .|.||.||+++....+++|++|++|+|+-+|+
T Consensus 566 ~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 566 ETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred ceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 578999999999888876 5555 68999999999999999999999999999885
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.8e-158 Score=1293.73 Aligned_cols=430 Identities=42% Similarity=0.844 Sum_probs=426.0
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
|++|||+|||||| ||||++..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 101 l~~gDgviTPAISVlSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~ 179 (534)
T PF02705_consen 101 LFYGDGVITPAISVLSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ 179 (534)
T ss_pred hhhcceeecchHHHHHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 6899999999999 999999999998 59999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++|
T Consensus 180 -~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~ 258 (534)
T PF02705_consen 180 -HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSH 258 (534)
T ss_pred -CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++.+||||||+|||+||++
T Consensus 259 p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~ 338 (534)
T PF02705_consen 259 PEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIG 338 (534)
T ss_pred cchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
|++++++||||++||+|||+||++||++||+|++++++.+||||++++++++++|+.+|+.||+||+.|++||||+||++
T Consensus 339 ~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~i 418 (534)
T PF02705_consen 339 VIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLI 418 (534)
T ss_pred HHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|++|+||++++++++++++++++++.++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|++
T Consensus 419 a~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~ 498 (534)
T PF02705_consen 419 AAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLT 498 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeec
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKD 434 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d 434 (615)
++++|+|+||++|||+++++++ +++|||++||||||
T Consensus 499 v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 499 VKTEPVPRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred EEEeccCCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 9999999999999999999997 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-151 Score=1222.65 Aligned_cols=506 Identities=31% Similarity=0.643 Sum_probs=478.7
Q ss_pred Cccccceecccce----eccceeccCCCCCCeEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007161 1 MVIGDGVLTPAIS----VSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 1 m~igDGvlTPAiS----veGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~ 76 (615)
+|+|||+|||||| ||||+++.|.+++ +|+|||++||++||++||+||++||++|||||++||+++|..|++||.+
T Consensus 117 lf~GD~vITPAiSVlSAvEGL~iv~p~~~~-~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~ 195 (627)
T COG3158 117 LFYGDAVITPAISVLSAVEGLEIVTPALDP-YVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID 195 (627)
T ss_pred HHhcccccchhHHHHHHhccccccCccccC-ccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999 9999999999985 9999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007161 77 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 156 (615)
Q Consensus 77 ~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~ 156 (615)
||+||+|+|||||++|+.++|..|++.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++|
T Consensus 196 -~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~ 274 (627)
T COG3158 196 -DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSN 274 (627)
T ss_pred -CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007161 157 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 236 (615)
Q Consensus 157 p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 236 (615)
|++..||||.++|+|++||++++||+||||||||+|||+||++|||++||++||+||.|||++..||||||.|||+|+++
T Consensus 275 p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~ 354 (627)
T COG3158 275 PEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVA 354 (627)
T ss_pred cccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007161 237 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 316 (615)
Q Consensus 237 ~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 316 (615)
++.++++||+|++||+|||+|||++|++||+|++.+++..|||+++.+.++.++|+++|..||+||+.|++||||+|+++
T Consensus 355 V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~plli 434 (627)
T COG3158 355 VVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLL 434 (627)
T ss_pred HhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007161 317 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 396 (615)
Q Consensus 317 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~~h~~~vfv~ 396 (615)
|++++++|+||++|+++.+++..++++++|.+.+...+.++.||||+++|+|+..+.+|.++.|++|||+++||++||++
T Consensus 435 a~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~lt 514 (627)
T COG3158 435 AAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLT 514 (627)
T ss_pred HHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEE
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007161 397 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 476 (615)
Q Consensus 397 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~l~~fI~~e~~~~~~~~~~~~~~~~~~~ 476 (615)
+++.|+|+|+++||++++++++ +++|+.++|||||+|+.++.+ +.... +|
T Consensus 515 v~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l------------~~~~~-----------~G---- 564 (627)
T COG3158 515 VRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPRAL------------RLCRK-----------KG---- 564 (627)
T ss_pred EEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHHHH------------HHHhh-----------cC----
Confidence 9999999999999999999998 699999999999999875433 11100 00
Q ss_pred eeccccccCcccccccccccCCCCccccccccccccccccccccCCcccccceeecCCCCCCCChhHHHHHHHHHHHHHc
Q 007161 477 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKEA 556 (615)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ea 556 (615)
.+|++.
T Consensus 565 ----------------------------------------------------~~f~im---------------------- 570 (627)
T COG3158 565 ----------------------------------------------------LKFDIM---------------------- 570 (627)
T ss_pred ----------------------------------------------------ceeccc----------------------
Confidence 001000
Q ss_pred CcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEE
Q 007161 557 GIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYY 614 (615)
Q Consensus 557 GVvYIlG~~~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~ 614 (615)
...|.+|++.+++++.|++-+- -+-.|.+|.||.-++...++||.+|++|+|---|
T Consensus 571 ~tsFfl~re~l~~~~~~g~~~w--~~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 571 ETSFFLSRESLIASKNSGMPRW--RDRLFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred ceEEEEEeeeeecCCCCCchHH--HHHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 2468999999999999988653 2457999999999999999999999999995433
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=89.54 E-value=0.47 Score=52.96 Aligned_cols=86 Identities=12% Similarity=0.123 Sum_probs=44.2
Q ss_pred ehhHHHHHHHHHHhhcccchhhhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccce-ee
Q 007161 30 LILACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWI-SL 105 (615)
Q Consensus 30 v~is~~ILv~LF~~Q~~GT~kvg~~---F~PImlvWf~~i~~~Gi~ni~~~~p~Vl~A~nP~ya~~f~~~~~~~g~~-~L 105 (615)
..+++++++++..+.-+|.+..+++ +.-+.++=++.+.+.|++.+.+-++. ..+|...+.-.. ++..+|. .+
T Consensus 166 ~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~a~ 241 (501)
T TIGR00911 166 RLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGTE-TSAGGIVLAF 241 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCCC-CcHHHHHHHH
Confidence 4577888888999999997666543 33333322333444555544331111 112221110000 1223443 46
Q ss_pred cceeeeecchhhhh
Q 007161 106 GGLLLCITGTEAMF 119 (615)
Q Consensus 106 G~V~L~iTG~EALy 119 (615)
..++.+.+|-|+.=
T Consensus 242 ~~~~~af~G~e~~~ 255 (501)
T TIGR00911 242 YSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHhHHHHh
Confidence 67788888888643
No 10
>TIGR00909 2A0306 amino acid transporter.
Probab=76.53 E-value=13 Score=40.27 Aligned_cols=168 Identities=15% Similarity=0.087 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHhhcccchhhh---hhhhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccc-eeec
Q 007161 31 ILACVILVGLFALQHFGTHKVA---VMFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGW-ISLG 106 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~kvg---~~F~PImlvWf~~i~~~Gi~ni~~~~p~Vl~A~nP~ya~~f~~~~~~~g~-~~LG 106 (615)
.++++++++...+..+|.+..+ ..++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 4567777888888998976555 5566655554444444555432 33222222221 11222 1233
Q ss_pred ceeeeecchhhhhc--cCCCCcccceeeehhhhhhhHHHhhcccchhhhccC-C-c---cccCcce----eeccCcchHH
Q 007161 107 GLLLCITGTEAMFA--DLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN-L-D---KIPNSFY----DSIPEPVFWP 175 (615)
Q Consensus 107 ~V~L~iTG~EALyA--DlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~-p-~---~~~npFf----~~~P~~~~~P 175 (615)
..+.+.+|-|+.-. +-=+-.+|.+..|-..-+. ...+.|+.-....... | + +.++|+. +...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45566677776543 3334455666665543222 1122243332222111 1 1 1223432 2222333333
Q ss_pred HHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCce
Q 007161 176 VFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 211 (615)
Q Consensus 176 ~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ 211 (615)
+.+.+.++..-+..+.+.+.==+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 444444444444444444443444445578999973
No 11
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=75.00 E-value=13 Score=40.25 Aligned_cols=179 Identities=15% Similarity=0.087 Sum_probs=98.5
Q ss_pred eEehhHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccceeecc
Q 007161 28 ELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGG 107 (615)
Q Consensus 28 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PImlvWf~~i~~~Gi~ni~~~~p~Vl~A~nP~ya~~f~~~~~~~g~~~LG~ 107 (615)
....++.+++++++.+.-+|....+++..-..++=++.+..+++..+..++......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 356789999999999999999998887766665555555666555555543332222221111 00000012345566
Q ss_pred eeeeecchhhh--hc-cCCCCcccceeeehhhhhhhHHHhhcccchhhhccCCc-ccc-----Ccce---eecc-CcchH
Q 007161 108 LLLCITGTEAM--FA-DLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLD-KIP-----NSFY---DSIP-EPVFW 174 (615)
Q Consensus 108 V~L~iTG~EAL--yA-DlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~p~-~~~-----npFf---~~~P-~~~~~ 174 (615)
++.+.+|-|+. +| ++=+ .+|.|-.+-..-..-+.++-.+++.+....-|. +.. +|+. .... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78889998864 33 2223 445555554443333333333333333333222 111 3442 2223 35555
Q ss_pred HHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCc
Q 007161 175 PVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPR 210 (615)
Q Consensus 175 P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr 210 (615)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555655666655556666666666777777899998
No 12
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=71.74 E-value=12 Score=41.66 Aligned_cols=25 Identities=8% Similarity=-0.063 Sum_probs=18.3
Q ss_pred ehhHHHHHHHHHHhhcccchhhhhh
Q 007161 30 LILACVILVGLFALQHFGTHKVAVM 54 (615)
Q Consensus 30 v~is~~ILv~LF~~Q~~GT~kvg~~ 54 (615)
..+.+++++++..+.-+|.+..+++
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 4566777888888899997765544
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=67.04 E-value=28 Score=38.76 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=13.8
Q ss_pred cchHHHHHHHHHHHHHHHh
Q 007161 310 GWVPLVLSSVFMVVMYIWH 328 (615)
Q Consensus 310 GW~pl~ia~~~~~iM~~W~ 328 (615)
-|.+++++++++....-|.
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666665
No 14
>PRK10655 potE putrescine transporter; Provisional
Probab=67.03 E-value=47 Score=36.38 Aligned_cols=43 Identities=9% Similarity=0.036 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHhhcccchhhhhh---hhhHHHHHHHHHHHHHHHh
Q 007161 31 ILACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYN 73 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~kvg~~---F~PImlvWf~~i~~~Gi~n 73 (615)
.++.++++++..+.-+|++..+++ ..-.+++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999998776654 2333334444444555443
No 15
>TIGR00930 2a30 K-Cl cotransporter.
Probab=63.74 E-value=35 Score=42.08 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=18.9
Q ss_pred EehhHHHHHHHHHHhhcccchhhhh
Q 007161 29 LLILACVILVGLFALQHFGTHKVAV 53 (615)
Q Consensus 29 vv~is~~ILv~LF~~Q~~GT~kvg~ 53 (615)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3457788888888898899865554
No 16
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=62.77 E-value=34 Score=37.70 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHhhcccchhhhhh
Q 007161 32 LACVILVGLFALQHFGTHKVAVM 54 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~~ 54 (615)
++++++.++..+.-+|++..+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 35566667888999999887765
No 17
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=60.97 E-value=70 Score=36.88 Aligned_cols=45 Identities=24% Similarity=0.372 Sum_probs=27.4
Q ss_pred EehhHHHHHHHHHHhhcccchhhhh---hhhhHHHHHHHHHHHHHHHh
Q 007161 29 LLILACVILVGLFALQHFGTHKVAV---MFAPIIIVWLISIFAVGLYN 73 (615)
Q Consensus 29 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~PImlvWf~~i~~~Gi~n 73 (615)
...+++++++++..+--+|++..++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456777777777888899776664 34444444444455556543
No 18
>PRK15049 L-asparagine permease; Provisional
Probab=58.00 E-value=42 Score=37.98 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhhcccchhhhh---hhhhHHHHHHHHHHHHHHH
Q 007161 32 LACVILVGLFALQHFGTHKVAV---MFAPIIIVWLISIFAVGLY 72 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~---~F~PImlvWf~~i~~~Gi~ 72 (615)
++.++++++..+.-+|....+. .+.=+.++=++.+.++|+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~ 190 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTV 190 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788888899999776665 4443333333333344544
No 19
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=55.51 E-value=25 Score=37.98 Aligned_cols=222 Identities=15% Similarity=0.185 Sum_probs=118.5
Q ss_pred EehhHHHHHHHHHHhhcccchhhhhh---hhhHHH-HHHHHHHHHHHHhhcccCcce-----eeecChHHHHHHHhhcCc
Q 007161 29 LLILACVILVGLFALQHFGTHKVAVM---FAPIII-VWLISIFAVGLYNVIHWNPKV-----ISAISPLYIIKYFRETGK 99 (615)
Q Consensus 29 vv~is~~ILv~LF~~Q~~GT~kvg~~---F~PIml-vWf~~i~~~Gi~ni~~~~p~V-----l~A~nP~ya~~f~~~~~~ 99 (615)
...++++++++.+.+.-+|....+++ .+=+.+ +-++.+.+.|++...+ +..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCc---------cc
Confidence 34578888888999999998776654 333333 3445566667665533 1111 1111221 11
Q ss_pred cc-ceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccCCcc----ccC------cceeec
Q 007161 100 TG-WISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLDK----IPN------SFYDSI 168 (615)
Q Consensus 100 ~g-~~~LG~V~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA~ll~~p~~----~~n------pFf~~~ 168 (615)
.+ +..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-++...-|++ .+| .+++..
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 11 4456677888899887655444444566655433322222222222223333332221 112 223332
Q ss_pred -cCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHHHh-hee--EEe
Q 007161 169 -PEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMILTL-AIT--IGF 244 (615)
Q Consensus 169 -P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i-~vv--~~F 244 (615)
.++..+.+.+++.++.+-+-.+.+.+.--++.+.-+-|.+|+. ..|++| +| .|..-.++...+- +.. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~~-~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPKW-FAKVNK--FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGG-GGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhhh-hhhccc--cC---CceeeehhhhHHHHHHHHHHHh
Confidence 4577888888888877776666666666677777788999942 222321 22 3655544444333 222 223
Q ss_pred ---cCchhhhhhhcceeeehhHHHH
Q 007161 245 ---QDTTLIGNAYGLACMTVMFITT 266 (615)
Q Consensus 245 ---~~s~~l~~AYGiaV~~vm~iTT 266 (615)
++-+.+.+.+.+......+++.
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345666666666665555553
No 20
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=54.36 E-value=46 Score=33.34 Aligned_cols=21 Identities=10% Similarity=0.385 Sum_probs=16.7
Q ss_pred CcchHHHHHHHHHHHHHHHhH
Q 007161 309 GGWVPLVLSSVFMVVMYIWHY 329 (615)
Q Consensus 309 GGW~pl~ia~~~~~iM~~W~~ 329 (615)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999998888766653
No 21
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=54.29 E-value=16 Score=39.50 Aligned_cols=88 Identities=23% Similarity=0.507 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhhcccchhhhh--hhhhHHHHHHHHHHHHHHH---------------------hhcccCcceeeecChH
Q 007161 32 LACVILVGLFALQHFGTHKVAV--MFAPIIIVWLISIFAVGLY---------------------NVIHWNPKVISAISPL 88 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~--~F~PImlvWf~~i~~~Gi~---------------------ni~~~~p~Vl~A~nP~ 88 (615)
.+|+.+.=.|+-| +|-.++|+ +.|-+.+.|.++-...++. -++||-|+.
T Consensus 212 mt~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa------- 283 (372)
T KOG3145|consen 212 MTVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQA------- 283 (372)
T ss_pred HHHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-------
Confidence 3444444444444 46677776 6666777776554444332 123443322
Q ss_pred HHHHHHhhcCcccceeecceeeeecchhh-----------------hhccCCCCcccce
Q 007161 89 YIIKYFRETGKTGWISLGGLLLCITGTEA-----------------MFADLGHFTALSI 130 (615)
Q Consensus 89 ya~~f~~~~~~~g~~~LG~V~L~iTG~EA-----------------LyADlGHFg~~~I 130 (615)
+.=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.-+
T Consensus 284 --~mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~v 339 (372)
T KOG3145|consen 284 --YMNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLV 339 (372)
T ss_pred --hhcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhH
Confidence 122345556887 78999999999965 6899999986543
No 22
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=52.09 E-value=98 Score=34.44 Aligned_cols=44 Identities=7% Similarity=-0.160 Sum_probs=27.7
Q ss_pred ccCcchHHHHHHHHHHHHhhhhheeechhhHHHHHHHhCCCCce
Q 007161 168 IPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 211 (615)
Q Consensus 168 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qai~Lg~fPr~ 211 (615)
..++..+.+.+.+.++..-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555555555555566666666666677788999965
No 23
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=48.25 E-value=19 Score=40.55 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=60.7
Q ss_pred HhCCCCceeEEecCCccCC----ceeechhhHHHHHHHhheeEEecCchhhhhhhcceeeehhHHHHHHHHHHHH-----
Q 007161 204 SLGCFPRVKVVHTSRHIYG----QIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIII----- 274 (615)
Q Consensus 204 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vm~iTT~L~~~v~~----- 274 (615)
+-|-.||+-+...=++..| |+|+|.+= +..+-=|-.-=|-++-.+=-.++||+|..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3689999999988888888 99999751 1111111222355666667889999999999998765221
Q ss_pred HHHhhhhhHHHHHHHHHHH-HHHHH
Q 007161 275 FVWYKSIFLAGAFLLFFLA-IEGVY 298 (615)
Q Consensus 275 ~~w~~~~~~~~~~~~~f~~-ie~~f 298 (615)
.+.-.-+.+..+|+.+|++ +|-++
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA~ 325 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYAA 325 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHHH
Confidence 2333445666777777776 45443
No 24
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=47.04 E-value=95 Score=32.69 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=37.9
Q ss_pred hhhhcceeeehhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH----HHHHHHHHHhh
Q 007161 251 GNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFL----AIEGVYLSAAF 303 (615)
Q Consensus 251 ~~AYGiaV~~vm~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~----~ie~~f~sa~l 303 (615)
=..||.+|.++.++.++-++..+..+.+.+.+.++++.++++ .+|-..+|+.-
T Consensus 15 ~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~ 71 (301)
T PF14362_consen 15 YAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIR 71 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 346888888888888888888888888887666666555554 45666565543
No 25
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=45.94 E-value=19 Score=37.29 Aligned_cols=29 Identities=28% Similarity=0.727 Sum_probs=25.4
Q ss_pred cCCcchHHHHHHHHHHHHHHHhHhHHHHH
Q 007161 307 PQGGWVPLVLSSVFMVVMYIWHYGTRKKY 335 (615)
Q Consensus 307 ~~GGW~pl~ia~~~~~iM~~W~~G~~~~~ 335 (615)
.+|||..++.+.+...+..+|++--+.+.
T Consensus 259 i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 259 IQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred cccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 48999999999999999999999666553
No 26
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=43.85 E-value=68 Score=35.20 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhh
Q 007161 31 ILACVILVGLFALQHFGTHKVAVMF 55 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~kvg~~F 55 (615)
.+++++++++..+.-+|.+..+++-
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i~ 147 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKLE 147 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4566677777888889988877653
No 27
>PRK10580 proY putative proline-specific permease; Provisional
Probab=42.92 E-value=1.1e+02 Score=33.87 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=18.3
Q ss_pred CcchHHHHHHHHHHHHHHHhHhHH
Q 007161 309 GGWVPLVLSSVFMVVMYIWHYGTR 332 (615)
Q Consensus 309 GGW~pl~ia~~~~~iM~~W~~G~~ 332 (615)
+.++.+.++.+.+.+.+.++.-.+
T Consensus 424 ~~~~~~~~~~~~~~~~~~~y~~~~ 447 (457)
T PRK10580 424 DTRISLYVGFAWIVLLLIGWMFKR 447 (457)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567788888888888888876543
No 28
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=40.66 E-value=13 Score=39.74 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=25.0
Q ss_pred CCCCcccceeeehhhhhhhHHHhhcccch-----hhhccCCcccc-Cc
Q 007161 122 LGHFTALSIRLAFTFFVYPCLVVQYMGQA-----AYLSKNLDKIP-NS 163 (615)
Q Consensus 122 lGHFg~~~I~~aw~~~V~P~L~L~Y~GQa-----A~ll~~p~~~~-np 163 (615)
=+++||.+|||+|-+ ..||+ .=||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 369999999999988 34544 34788999766 54
No 29
>PRK11021 putative transporter; Provisional
Probab=39.07 E-value=3.5e+02 Score=29.36 Aligned_cols=27 Identities=22% Similarity=0.225 Sum_probs=21.3
Q ss_pred ehhHHHHHHHHHHhhcccchhhhhhhh
Q 007161 30 LILACVILVGLFALQHFGTHKVAVMFA 56 (615)
Q Consensus 30 v~is~~ILv~LF~~Q~~GT~kvg~~F~ 56 (615)
..+++++++++..+.-+|.+..+++-.
T Consensus 116 ~~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 116 LLAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 457778888889999999888886543
No 30
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=38.65 E-value=1.6e+02 Score=33.43 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=22.7
Q ss_pred cceeeeecchhhh--hccCCCCcccceeeehhhhhhhHHHhhcccc
Q 007161 106 GGLLLCITGTEAM--FADLGHFTALSIRLAFTFFVYPCLVVQYMGQ 149 (615)
Q Consensus 106 G~V~L~iTG~EAL--yADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ 149 (615)
-+++.+.+|-|+. .|+==+--+|.+-.|=..-+.-+.++.++|-
T Consensus 201 ~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~ 246 (507)
T TIGR00910 201 VAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGG 246 (507)
T ss_pred HHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 3445667888865 4544455566655554433333333333433
No 31
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=38.56 E-value=1.3e+02 Score=33.21 Aligned_cols=44 Identities=9% Similarity=0.255 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHhhcccch---hhhhhhhhHHHHHHHHHHHHHHHhh
Q 007161 31 ILACVILVGLFALQHFGTH---KVAVMFAPIIIVWLISIFAVGLYNV 74 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~---kvg~~F~PImlvWf~~i~~~Gi~ni 74 (615)
.+++++++++..+.-+|.+ |+...+.=+.++=++.+.++|++..
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566667777788989876 4444554444444555556666543
No 32
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=36.71 E-value=68 Score=35.31 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHhhcccchhhhhh
Q 007161 32 LACVILVGLFALQHFGTHKVAVM 54 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~~ 54 (615)
+.+++++++..+.-+|++..+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45666667788899998776654
No 33
>PRK11387 S-methylmethionine transporter; Provisional
Probab=35.98 E-value=1e+02 Score=34.37 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhhcccchhhhh
Q 007161 33 ACVILVGLFALQHFGTHKVAV 53 (615)
Q Consensus 33 s~~ILv~LF~~Q~~GT~kvg~ 53 (615)
.+++++++..+.-+|.+..+.
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 444455667778888876654
No 34
>PRK10746 putative transport protein YifK; Provisional
Probab=33.87 E-value=1.9e+02 Score=32.35 Aligned_cols=26 Identities=8% Similarity=0.072 Sum_probs=17.7
Q ss_pred cchHHHHHHHHHHHHHHHhHhHHHHH
Q 007161 310 GWVPLVLSSVFMVVMYIWHYGTRKKY 335 (615)
Q Consensus 310 GW~pl~ia~~~~~iM~~W~~G~~~~~ 335 (615)
.......+.+++.+++.++...+.-+
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~ 452 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNR 452 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45677788888887777776654433
No 35
>PRK10249 phenylalanine transporter; Provisional
Probab=32.76 E-value=1.6e+02 Score=32.69 Aligned_cols=101 Identities=22% Similarity=0.238 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHhhcccchhhhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHH--HhhcCccc-ceee
Q 007161 32 LACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKY--FRETGKTG-WISL 105 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~~---F~PImlvWf~~i~~~Gi~ni~~~~p~Vl~A~nP~ya~~f--~~~~~~~g-~~~L 105 (615)
++.++++++..+.-+|.+..|++ +.=+.++..+.+.++|+.-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 46667777788888888766643 343444555555566665443322210 1111111000 00122223 2445
Q ss_pred cceeeeecchhhh--hccCCCCcccceeeeh
Q 007161 106 GGLLLCITGTEAM--FADLGHFTALSIRLAF 134 (615)
Q Consensus 106 G~V~L~iTG~EAL--yADlGHFg~~~I~~aw 134 (615)
..++.+.+|-|+. .|+=-+-.+|+|-.+=
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai 246 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAV 246 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHH
Confidence 5667788898865 5655566667665543
No 36
>PRK10238 aromatic amino acid transporter; Provisional
Probab=30.58 E-value=1.6e+02 Score=32.76 Aligned_cols=113 Identities=20% Similarity=0.243 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHhhcccchhhhh---hhhhHHHHHHHHHHHHHHHhhccc--Ccc-eeeecChHHHHHHHhhcCcccc-ee
Q 007161 32 LACVILVGLFALQHFGTHKVAV---MFAPIIIVWLISIFAVGLYNVIHW--NPK-VISAISPLYIIKYFRETGKTGW-IS 104 (615)
Q Consensus 32 is~~ILv~LF~~Q~~GT~kvg~---~F~PImlvWf~~i~~~Gi~ni~~~--~p~-Vl~A~nP~ya~~f~~~~~~~g~-~~ 104 (615)
.+++++++++.+.-+|++..|. .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888899876664 333333333333333444433221 121 11110000 00001121222 23
Q ss_pred ecceeeeecchhh--hhccCCCCcccceeeehhhhhhhHHHhhccc
Q 007161 105 LGGLLLCITGTEA--MFADLGHFTALSIRLAFTFFVYPCLVVQYMG 148 (615)
Q Consensus 105 LG~V~L~iTG~EA--LyADlGHFg~~~I~~aw~~~V~P~L~L~Y~G 148 (615)
++.++.+.+|-|+ ..|+=-+=.+|++-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 5556778889887 4455456667777766532 23344455554
No 37
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=29.29 E-value=1.4e+02 Score=33.38 Aligned_cols=24 Identities=25% Similarity=0.195 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHhhcccchhhhhh
Q 007161 31 ILACVILVGLFALQHFGTHKVAVM 54 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~kvg~~ 54 (615)
.++++++++++.+.-+|++..+++
T Consensus 131 ~~~~~~~~~~~~ln~~Gi~~~~~i 154 (473)
T TIGR00905 131 LGASVLLWVFTFLVLRGVRQAAFI 154 (473)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHH
Confidence 355666667788999999776644
No 38
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=29.13 E-value=5e+02 Score=28.63 Aligned_cols=46 Identities=9% Similarity=0.169 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhh---HHHHHHHHHHHHHHHhhcc
Q 007161 31 ILACVILVGLFALQHFGTHKVAVMFAP---IIIVWLISIFAVGLYNVIH 76 (615)
Q Consensus 31 ~is~~ILv~LF~~Q~~GT~kvg~~F~P---ImlvWf~~i~~~Gi~ni~~ 76 (615)
.+++++++++..+.-+|++..+.+--. +.++-++.+.++|+..+..
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~ 176 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFG 176 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 356666667777888898777755433 3333344444456554433
No 39
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=24.19 E-value=1e+03 Score=26.51 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=18.1
Q ss_pred ehhHHHHHHHHHHhhcccchhhhhh
Q 007161 30 LILACVILVGLFALQHFGTHKVAVM 54 (615)
Q Consensus 30 v~is~~ILv~LF~~Q~~GT~kvg~~ 54 (615)
..++.++++++..+.-+|++..+++
T Consensus 145 ~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 145 VLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4566677777888888998766654
No 40
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=22.92 E-value=47 Score=28.85 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=10.9
Q ss_pred HHHHHhhhcCCCCcc
Q 007161 584 LYSFLRKNCRGPSVA 598 (615)
Q Consensus 584 ~Y~FLRkNcR~~~~~ 598 (615)
=|.|||+|||.+.-.
T Consensus 25 ~~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 25 PYEWLRDNCPCAECR 39 (89)
T ss_dssp EHHHHHHT-SSSSTC
T ss_pred CHHHHhccCCChhhc
Confidence 379999999987644
No 41
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=22.57 E-value=19 Score=35.89 Aligned_cols=70 Identities=24% Similarity=0.427 Sum_probs=50.5
Q ss_pred CCCCChhHHHHHHHHHHHHHcCcEE-EeeceEEEecCCCchHHHHHHHHHHHHH---hhhcCCCCcccccCCCCEEEee
Q 007161 536 DPGMDPAVREELMDLIQAKEAGIAY-IMGHSYVKARRSSSFVKRFMIDILYSFL---RKNCRGPSVALNIPHISLIEVG 610 (615)
Q Consensus 536 ~~~~~~~v~eEl~~L~~A~eaGVvY-IlG~~~v~ar~~Ss~lKK~vIn~~Y~FL---RkNcR~~~~~L~IPh~~LleVG 610 (615)
.++.+|++++-++ +++++|+-- |..+ .+.++=..+..|+=+|++|.-. +++.|...+.+++|.++.+-||
T Consensus 44 ~~~~tpe~~~W~~---e~k~~gi~v~vvSN--n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 44 NPDATPELRAWLA---ELKEAGIKVVVVSN--NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CCCCCHHHHHHHH---HHHhcCCEEEEEeC--CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 3444566655554 567778754 4443 5666667788899999887653 6788888999999999999988
No 42
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.47 E-value=71 Score=24.91 Aligned_cols=29 Identities=31% Similarity=0.622 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhHhHHHHHhhhhccCCChH
Q 007161 318 SVFMVVMYIWHYGTRKKYNFDLHNKVSLR 346 (615)
Q Consensus 318 ~~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 346 (615)
++++.....|.|-+++|.++|...+++++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 34444445566655556556655555543
No 43
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=21.06 E-value=1.1e+02 Score=27.87 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=22.3
Q ss_pred ceEEEEEecCCCCcEEEEEEEEeeeccc
Q 007161 409 ERFLIGRVCPRPYRMYRCIVRYGYKDVQ 436 (615)
Q Consensus 409 eR~~v~~~~~~~~~~~r~~~ryGy~d~~ 436 (615)
--+.+..+...+.+.|+|.+.+|.-|+.
T Consensus 74 asL~I~nl~~sDsG~Y~C~V~~g~~~~~ 101 (112)
T cd05900 74 ATLEITELRSNDSGTYRCEVMHGIEDNY 101 (112)
T ss_pred cEEEEeecccccCEEEEEEEecCCCCce
Confidence 3466677777788999999999988764
Done!