BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007166
(615 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495046|ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
gi|296081277|emb|CBI17721.3| unnamed protein product [Vitis vinifera]
Length = 774
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/590 (62%), Positives = 446/590 (75%), Gaps = 13/590 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMGMLGLPFL+R+ GF AKIY+TE ARIGQL+ME+L+ MN E+RQFYG EES PQWM
Sbjct: 185 SPMGMLGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWM 244
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILII 156
WE+LE LPS R+I LGEDG ELGG P + VK C+ KV TL++ +E CYNG LII
Sbjct: 245 NWEKLESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCMQKVHTLKYAQEVCYNGTLII 304
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KA SSGL+IG CNW I+G K NIA +S S F S HAM+FDY A++G+DLI+YSDLSS
Sbjct: 305 KAVSSGLEIGTCNWTINGPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDLSSPVL 364
Query: 217 TEDIDQSSFS----------DDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAG 266
+ D S +S +N+ E L + ES+EEMEKL FICSC IDSVKAG
Sbjct: 365 EDVKDNSCYSAPTSQKSSTLSADNDQEASAELLLSTSESLEEMEKLNFICSCIIDSVKAG 424
Query: 267 GSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQE 326
GSVLIPI R+G+ LQLLE I++ +E SSLK+PI+IISSVAEELLA+TN IPEWLCKQRQE
Sbjct: 425 GSVLIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQRQE 484
Query: 327 KLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 386
KLFSG+P FAH +LIKEKK+HVFPAVHSP LL WQEPCI FSPHWSLRLGP +HLLRRW
Sbjct: 485 KLFSGEPFFAHTQLIKEKKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVVHLLRRW 544
Query: 387 SGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPE 446
SGD NSLL++E VDA+LA+LPFKP++MKVLQCSFLSG KLQKVQPLLKILQPK VLFPE
Sbjct: 545 SGDENSLLIMEEGVDADLALLPFKPMAMKVLQCSFLSGIKLQKVQPLLKILQPKFVLFPE 604
Query: 447 EWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITR 506
+ R VS+SD S + +Y ENET+ +PSLK S+ELEIAAD+ S R L + + I R
Sbjct: 605 DLRQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAADLVSLIHCRRLTAESIGIGR 664
Query: 507 LKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELSKMGINGSVERCMTD 565
LKG V HGKHQL +E SSQ+R P LHWGS D E LLA L KMGI GSVE+ +D
Sbjct: 665 LKGDFSVTHGKHQLHSGSEQADSSQSRPPLLHWGSLDLERLLAVLEKMGIRGSVEQGNSD 724
Query: 566 AESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
+SE+ V V +P K++IEVR T+ISA++++L+S I +A++ IL G+
Sbjct: 725 TDSENARVVHVYEPNKALIEVRENSTIISASNESLSSLIFEAVDGILSGL 774
>gi|255558732|ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
gi|223540437|gb|EEF42006.1| conserved hypothetical protein [Ricinus communis]
Length = 705
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/593 (59%), Positives = 465/593 (78%), Gaps = 17/593 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
S MGMLGLPFLT+ +GFSAKIY TEA AR+GQL+ME+L+ M++E+RQFYG+EES PQWM
Sbjct: 114 STMGMLGLPFLTQCKGFSAKIYATEATARVGQLIMEDLVSMHVEFRQFYGSEESD-PQWM 172
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILII 156
+WEELELLPS LR++ LG+DGSELG P + VKDC+ K++ L++ E ACYNG L+I
Sbjct: 173 RWEELELLPSELREVTLGKDGSELGAWFPLYSSVDVKDCMQKIEMLKYAEAACYNGELVI 232
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KAFSSG++IG+CNW+I G K N+A++S S F S HAM+FDY A++G+DLILYSD SS D
Sbjct: 233 KAFSSGIEIGSCNWLIEGPKENMAWVSSSIFLSTHAMEFDYHALRGTDLILYSDFSSQDV 292
Query: 217 TEDIDQ------------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVK 264
ED++Q SS S D +NW+EL + L + DES+EE +KLAF+CSC + SVK
Sbjct: 293 IEDVEQHESYFVSANHNLSSLSADGDNWKELNDCLLSNDESIEESDKLAFLCSCVVGSVK 352
Query: 265 AGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQR 324
AGGSVL+P+NR+G+ +QLLEQI+IF+E S++K+PIY+ISSVA ELLA+TN IPEWLCK R
Sbjct: 353 AGGSVLVPLNRLGIIMQLLEQISIFLESSAIKVPIYVISSVAAELLAFTNIIPEWLCKFR 412
Query: 325 QEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLR 384
QEKLFSG+PLF+HV+L+K+KK+HVFPAVHSP L+ NWQEPCIVF+ HW+LRLGP + LLR
Sbjct: 413 QEKLFSGEPLFSHVELMKDKKLHVFPAVHSPNLITNWQEPCIVFASHWNLRLGPVVPLLR 472
Query: 385 RWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
RW D NSLLVLE+ +DA++A+LPFKPI+MKVLQCSFLSG + QK+QPLLKIL PK+VLF
Sbjct: 473 RWRRDENSLLVLEDGLDADMALLPFKPIAMKVLQCSFLSGIRTQKIQPLLKILHPKVVLF 532
Query: 445 PEEWRTHVSFSDVTS--FSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKL 502
PE+ + H++ S +S FSV +Y+ENET I SLK+S+++EIA D+A++F W+ LK+K
Sbjct: 533 PEDLKQHINASSSSSHPFSVLYYTENETQEIQSLKDSSDVEIATDLATRFCWKKLKRKDT 592
Query: 503 NITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERC 562
+ITRL+G L ++ KH+L+ + SSQ+R L G D E LL LSKMG NGS+ER
Sbjct: 593 DITRLEGELLIDDSKHRLVSGKKVSVSSQSRQLLLCGVVDMEKLLGTLSKMGFNGSIERN 652
Query: 563 MTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
M D ES+ +K+ DP++++IEV TVI+A D+NLAS I +A+ +L+ I
Sbjct: 653 MNDGESDSVGIIKIHDPKEALIEVGGMSTVINAPDENLASVIFEAISTLLDVI 705
>gi|449520481|ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
sativus]
Length = 680
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/586 (57%), Positives = 439/586 (74%), Gaps = 12/586 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMGMLGLPFLTR +GFSAKIY+TEA AR+G++MM++LI M+ME++QFYG+E+ + QWM
Sbjct: 98 SPMGMLGLPFLTREKGFSAKIYVTEATARLGKIMMDDLIAMHMEFKQFYGSEDDAISQWM 157
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCP--CIAHVKDCISKVQTLRFGEEACYNGILII 156
+ E+L LL LR++A G+D ++ GG P A VKDC+ KV+TLR+GEE CYNG L+I
Sbjct: 158 RQEDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVI 217
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KAFSSGL+IG+CNW I+ K +IAYIS S F S +AMDFDY A+Q + I+YSD SSL
Sbjct: 218 KAFSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQ-KETIIYSDFSSLAF 276
Query: 217 TEDIDQS---SFSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
D++ S D+ + E L N LS E+VEE EKL FICSCAI SV++GGSV
Sbjct: 277 MNDVENDTRVSLIDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSVESGGSV 336
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIPINR+GV LQLLEQI+ ++ S LK+PIY ISSVAEELL + N IPEWLC+QRQ KLF
Sbjct: 337 LIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQRQHKLF 396
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
SG+P+F V+L+KE K+HV PA+HSPKLL+NWQEPCIVF PHWSLRLGP +HLLRRW GD
Sbjct: 397 SGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGD 456
Query: 390 HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 449
+SLLVLE +D EL++LPFKP+SMKVLQCSF SG K +KV+PLLK+LQPK+V+ PE
Sbjct: 457 PSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVLPENLS 516
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
++ ++ SF+V YSE +++H+P+LK+S+ELEIA+D A F WR L Q +NITRLKG
Sbjct: 517 RLIN-TNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINITRLKG 575
Query: 510 RLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESE 569
L +N GK +L EN Q RP +HWG P+ E LL LSKMGI GSV++ M+DAE
Sbjct: 576 ELSLNCGKFKLFSENTQVAMYQ-RPLVHWGQPNLEKLLTVLSKMGIEGSVQQEMSDAEPN 634
Query: 570 DGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
D + + K +IE++ + T+IS DK L+++I A++++++G+
Sbjct: 635 DVHVIHIHGLTKGVIEIQESRTIISVVDKTLSAQIFNALDSVMDGV 680
>gi|449457454|ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
Length = 693
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/586 (57%), Positives = 439/586 (74%), Gaps = 12/586 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMGMLGLPFLTR +GFSAKIY+TEA AR+G++MM++LI M+ME++QFYG+E+ + QWM
Sbjct: 111 SPMGMLGLPFLTREKGFSAKIYVTEATARLGKIMMDDLIAMHMEFKQFYGSEDDAISQWM 170
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCP--CIAHVKDCISKVQTLRFGEEACYNGILII 156
+ E+L LL LR++A G+D ++ GG P A VKDC+ KV+TLR+GEE CYNG L+I
Sbjct: 171 RQEDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVI 230
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KAFSSGL+IG+CNW I+ K +IAYIS S F S +AMDFDY A+Q + I+YSD SSL
Sbjct: 231 KAFSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQ-KETIIYSDFSSLAF 289
Query: 217 TEDIDQS---SFSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
D++ S D+ + E L N LS E+VEE EKL FICSCAI SV++GGSV
Sbjct: 290 MNDVENDTRVSLIDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSVESGGSV 349
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIPINR+GV LQLLEQI+ ++ S LK+PIY ISSVAEELL + N IPEWLC+QRQ KLF
Sbjct: 350 LIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQRQHKLF 409
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
SG+P+F V+L+KE K+HV PA+HSPKLL+NWQEPCIVF PHWSLRLGP +HLLRRW GD
Sbjct: 410 SGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGD 469
Query: 390 HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 449
+SLLVLE +D EL++LPFKP+SMKVLQCSF SG K +KV+PLLK+LQPK+V+ PE
Sbjct: 470 PSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVLPENLS 529
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
++ ++ SF+V YSE +++H+P+LK+S+ELEIA+D A F WR L Q +NITRLKG
Sbjct: 530 RLIN-TNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINITRLKG 588
Query: 510 RLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESE 569
L +N GK +L EN Q RP +HWG P+ E LL LSKMGI GSV++ M+DAE
Sbjct: 589 ELSLNCGKFKLFSENTQVAMYQ-RPLVHWGQPNLEKLLTVLSKMGIEGSVQQEMSDAEPN 647
Query: 570 DGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
D + + K +IE++ + T+IS DK L+++I A++++++G+
Sbjct: 648 DVHVIHIHGLTKGVIEIQESRTIISVVDKTLSAQIFNALDSVMDGV 693
>gi|356541557|ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
[Glycine max]
Length = 794
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 323/595 (54%), Positives = 439/595 (73%), Gaps = 19/595 (3%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMG++GLPFLTR +GFSAKIY+TEA+ARIGQLMME+L+ M+ E+RQFYG ES+ P W+
Sbjct: 201 SPMGIMGLPFLTRTKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPGESNFPSWL 260
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILII 156
+ EELE+LPS LR++ LG+DG ELGG P A VKD + K+ T+ + EE C+NG L+I
Sbjct: 261 RHEELEVLPSELRELILGKDGVELGGWMPLYSAADVKDFMLKIHTVNYAEEVCFNGTLVI 320
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KAFSSG++IG+CNWI++ KG+IAY+SGS+F S HAM FDY ++QG+ +++YSD SL
Sbjct: 321 KAFSSGIEIGSCNWILNSPKGDIAYLSGSSFISAHAMPFDYHSLQGTCVLIYSDFLSLGD 380
Query: 217 TEDI---DQSSFSDDNN----NWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
T+D D S S + + ++L N E EE EKL FICS A++ +K GGSV
Sbjct: 381 TQDGENGDNYSVSTADKLLPISSQDLAGFNHNSVEYSEEKEKLVFICSHAMEHIKQGGSV 440
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP +R+G L LLE++ +E S K+P+YIISSVAEELLA N IPEWLCKQRQEKLF
Sbjct: 441 LIPFDRLGTILLLLEEMTASLEASDTKVPVYIISSVAEELLALLNIIPEWLCKQRQEKLF 500
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLL-------MNWQEPCIVFSPHWSLRLGPTIHL 382
G+PLFAH+KL+KE+KIHV PA+HS +LL +NWQEPCIVF PH +LR+GP +HL
Sbjct: 501 DGEPLFAHLKLLKERKIHVVPAIHSHELLNXCVACRINWQEPCIVFCPHRNLRMGPVVHL 560
Query: 383 LRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLV 442
LRRW GD SLL+LE+ ++ L++LP++P++MKVLQC F G L +VQPLLK LQPK V
Sbjct: 561 LRRWCGDPKSLLILEDVLNP-LSLLPYQPVAMKVLQCVFPVGIGLHEVQPLLKTLQPKTV 619
Query: 443 LFPEEWRTHVSF-SDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK 501
L PEE R H++F S+ SFSV +Y+E ET+ +P K+S+EL+IA D+AS F W+ K+++
Sbjct: 620 LCPEELRLHINFSSEKKSFSVLYYTEAETLKVPYRKDSSELKIATDLASHFYWKTFKKEE 679
Query: 502 LNITRLKGRLFVNHGKHQLLPENEPGGS-SQTRPFLHWGSPDPENLLAELSKMGINGSVE 560
+NI +LKG L + +G+H LL +N+ S S R +HWG PD E L+A LSKMGI+G+++
Sbjct: 680 INIAKLKGELLMENGRHHLLFDNDNKNSLSNNRSLVHWGLPDSEKLMAALSKMGISGNIQ 739
Query: 561 RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
++DA+S+ V +QDP K+ IE+ T+I+ AD+N+A+ I K ++NIL+G+
Sbjct: 740 HGVSDAKSQTVCIVHIQDPYKASIEIGTTSTIITTADENVAAFIYKIVDNILDGV 794
>gi|297829304|ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
lyrata]
gi|297328374|gb|EFH58793.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
lyrata]
Length = 699
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 303/590 (51%), Positives = 425/590 (72%), Gaps = 13/590 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
+PMG+LGLPFLT+ GFSAKIY+TEA A+IGQLMME+L+ M+ E+R F+G + SS P W+
Sbjct: 110 NPMGLLGLPFLTQNPGFSAKIYMTEATAKIGQLMMEDLVSMHAEFRCFHGPDNSSFPGWI 169
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
K + E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LII
Sbjct: 170 KNLDREQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQAVKFAEEVCYNGTLII 229
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KA SSGLDIGACNW+I+G G+++Y+S S F S HA +FD+ ++G+D+++YSD SSL S
Sbjct: 230 KALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARNFDFHGLKGTDVLIYSDFSSLQS 289
Query: 217 TEDIDQSSFSDD-NNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
E + S D +NN+ + +SL N ++S+EEMEKL FICSCA +S AGGS LI
Sbjct: 290 AEVTENGCISPDPDNNYISTTSDNKDSLLNTEDSLEEMEKLEFICSCAAESADAGGSTLI 349
Query: 272 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 331
I R+G+ LQLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+Q+QEKL SG
Sbjct: 350 TITRIGIVLQLLELMSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQQQEKLISG 409
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLL----MNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
+P F H+K IK+KKIH+FPA+HSP L+ +WQEPCI+F+PHWSLRLGP++ LL+RW
Sbjct: 410 EPSFGHLKFIKDKKIHLFPAIHSPNLIYANRTSWQEPCIIFAPHWSLRLGPSVQLLQRWR 469
Query: 388 GDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEE 447
GD SLLVLE+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ LL +LQPK+VL P+
Sbjct: 470 GDPKSLLVLEDGISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLLSVLQPKIVLVPDA 529
Query: 448 WRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITR 506
++F+ + + S+ +Y EN+T+ +P + ++ +EI D+ASK WR L+Q++ I R
Sbjct: 530 VNQRINFAAMKTISILNYFENKTLRVPRIADNPSVEITTDLASKLSWRKLRQRENFGIAR 589
Query: 507 LKGRLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTD 565
LKG L + GKH+L+ E SS + RP HWGS PE+LL L K+GI GS+E+ + +
Sbjct: 590 LKGGLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPESLLDALLKIGIKGSLEQSIGE 649
Query: 566 AESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
S+D + + +P +IEV T I D+N+AS++ +A++ IL+GI
Sbjct: 650 TGSDDNSIIHIANPSSGLIEVSEMGTAIITDDENVASQVFQAIDGILDGI 699
>gi|30680341|ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
gi|332641036|gb|AEE74557.1| integrator complex subunit 9 [Arabidopsis thaliana]
Length = 699
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 299/590 (50%), Positives = 416/590 (70%), Gaps = 13/590 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
+PMG+LGLPFLT+ GF AKIY+TE A+IGQLMME+++ M+ E+R F+G + SS P W+
Sbjct: 110 NPMGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWI 169
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
K + E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LII
Sbjct: 170 KNLDSEQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLII 229
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KA SSGLDIGACNW+I+G G+++Y+S S F S HA FD+ ++ +D+++YSD SSL S
Sbjct: 230 KALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQS 289
Query: 217 TEDIDQSSFS-DDNNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
E + S D +NN+ + +SL N ++S+EEMEKLAF+CSCA +S AGGS LI
Sbjct: 290 AEVTEDGCISPDSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGSTLI 349
Query: 272 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 331
I R+G+ LQLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+QRQEKL SG
Sbjct: 350 TITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQRQEKLISG 409
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLL----MNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
+P F H+K IK KKIH+FPA+HSP L+ +WQEPCIVF+ HWSLRLGP++ LL+RW
Sbjct: 410 EPSFGHLKFIKNKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSVQLLQRWR 469
Query: 388 GDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEE 447
GD SLLVLE+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ L+ +LQPK+ L P+
Sbjct: 470 GDPKSLLVLEDGISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLVSVLQPKIFLVPDA 529
Query: 448 WRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITR 506
+S + + + S+ +Y EN+T+H+P + ++ +EI D+ASK WR L+Q++ I R
Sbjct: 530 VNQRISLAAIKTISILNYFENKTLHVPRIVDNPSVEITTDLASKLSWRKLRQRESFGIAR 589
Query: 507 LKGRLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTD 565
LKG L + GKH+L+ E SS + RP HWGS PE LL L KMGI GS+E+ D
Sbjct: 590 LKGGLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPELLLDALLKMGIKGSIEQSTGD 649
Query: 566 AESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
SED + +++P +IE T I D+N+ S++ +A++ +L+GI
Sbjct: 650 NGSEDKSIIHIENPNSGLIEFSEMGTAIITGDENVVSQVFQAIDGVLDGI 699
>gi|147863921|emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]
Length = 665
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/606 (52%), Positives = 386/606 (63%), Gaps = 95/606 (15%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMGMLGLPFL+R+ GF AKIY+TE ARIGQL+ME+L+ MN E+RQFYG EES PQWM
Sbjct: 126 SPMGMLGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWM 185
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILII 156
WE+LE LPS R+I LGEDG ELGG P + VK CI KV TL++ +E CYNG LII
Sbjct: 186 NWEKLESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCIQKVHTLKYAQEVCYNGTLII 245
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KA SSGL+IG CNW I+G K NIA S F S HAM+FDY A++G+DLI+YSDLSS
Sbjct: 246 KAVSSGLEIGTCNWTINGPKRNIACXXSSIFNSSHAMNFDYHALRGNDLIIYSDLSS--- 302
Query: 217 TEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI-------DSVKAGGSV 269
V EM + + + DSVKAGGSV
Sbjct: 303 ----------------------------PVLEMSRTTAVTLHQLVRNPQLSDSVKAGGSV 334
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIPI R+G+ LQLLE I++ +E SSLK+PI+IISSVAEELLA+TN IPEWLCKQRQEK
Sbjct: 335 LIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQRQEK-- 392
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
EPCI FSPHWSLRLGP +HLLRRWSGD
Sbjct: 393 ---------------------------------EPCIAFSPHWSLRLGPVVHLLRRWSGD 419
Query: 390 HNSLLVLENEVDAELAVLPFKPISMK-------------------VLQCSFLSGKKLQKV 430
NSLL++E VDA+LA+LPFKP++MK ++ G LQKV
Sbjct: 420 ENSLLIMEEGVDADLALLPFKPMAMKEVFRLDDLHSQYFGIDHSLNMRHLMFPGPLLQKV 479
Query: 431 QPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIAS 490
QPLLKILQPK VLFPE+ R VS+SD S + +Y ENET+ +PSLK S+ELEIAAD+ S
Sbjct: 480 QPLLKILQPKFVLFPEDLRQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAADLVS 539
Query: 491 KFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAE 549
R L + + I RLKG V HGKHQL +E SSQ+R P LHWGS D E LLA
Sbjct: 540 LIHCRRLTAESIGIGRLKGDFSVTHGKHQLHSGSEQADSSQSRPPLLHWGSLDLERLLAV 599
Query: 550 LSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAME 609
L KMGI GSVE+ D +SE+ V V +P K++IEVR T+ISA++++L+S I +A++
Sbjct: 600 LEKMGIRGSVEQGNXDTDSENARVVHVYEPNKALIEVRENSTIISASNESLSSLIFEAVD 659
Query: 610 NILEGI 615
IL G+
Sbjct: 660 GILSGL 665
>gi|357456769|ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
gi|355487713|gb|AES68916.1| Integrator complex subunit [Medicago truncatula]
Length = 536
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/527 (50%), Positives = 362/527 (68%), Gaps = 41/527 (7%)
Query: 130 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 189
A VKD I K+ TL + +EACYNG L+IKAFSSG++IG+ NW ++G KG+IAY+S S F S
Sbjct: 10 ADVKDSIQKINTLNYAQEACYNGTLVIKAFSSGVEIGSSNWTLNGPKGDIAYLSSSCFFS 69
Query: 190 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDI-DQSSFSDDNNN------WEELMNSLSNY 242
HAM FDY ++Q + ++YSD SSL +D+ D +++D ++ +E+ +
Sbjct: 70 AHAMAFDYSSLQRTSTLIYSDFSSLIDAQDVEDGDNYTDPTSDKLLPPSFEDSDGFSLDS 129
Query: 243 DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYII 302
D +++E EKL FICSCAI+ VK GGSVLIPINR+G LQLLE++A +E S++++PIYII
Sbjct: 130 DVNLDEKEKLVFICSCAIECVKDGGSVLIPINRLGTILQLLEEMATLLEASAMEVPIYII 189
Query: 303 SSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ 362
SSVAEELLA N IPEWL KQRQE+LF+G+PLF HVKL+KEKKI V P +HS +LL +WQ
Sbjct: 190 SSVAEELLALLNIIPEWLSKQRQERLFAGEPLFDHVKLLKEKKIRVVPNIHSHQLLKDWQ 249
Query: 363 EPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFL 422
EPCIVF PHWSLR+GP +HLLRRW GD SLL+LE+ V+ ELA+LPFKP+ MKVLQC F
Sbjct: 250 EPCIVFCPHWSLRMGPIVHLLRRWCGDPKSLLILEDMVNPELALLPFKPVEMKVLQCLFP 309
Query: 423 SGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIP-------- 474
SG LQK+QPLLK LQPK +LFPE+ R + FS SFSVS+Y+E ET+ +P
Sbjct: 310 SGIGLQKLQPLLKTLQPKTILFPEDLRLKMCFSCEKSFSVSYYTEAETLKVPCQKESSEL 369
Query: 475 ------------------------SLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
KES+EL+I AD+AS+F W+ K++ +N+T+LKG+
Sbjct: 370 KMSFSCEKSFSVSYCTEPETLKVFCQKESSELKIEADLASQFYWKTFKKEGINVTKLKGK 429
Query: 511 LFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESED 570
L + +G+H LL +N+ S + + G D L+ ELSKMGIN S+E D ES++
Sbjct: 430 LLMENGRHHLLLDNDKKTSLRNSSLVRCGLTDYHKLIPELSKMGINASMELIKDDVESQN 489
Query: 571 GFTVKVQDPEKSMIEVRAAVTVISAA--DKNLASRIVKAMENILEGI 615
V ++P K++IE+ TVI+ A D N+AS + KA++NI++G+
Sbjct: 490 VCLVHTEEPYKALIEIGKTSTVITTAESDANVASILYKAIDNIMDGV 536
>gi|414879106|tpg|DAA56237.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 673
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/598 (42%), Positives = 385/598 (64%), Gaps = 27/598 (4%)
Query: 39 SPMGMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 97
S GMLGLPFLT + GF+ K+Y+TE AARIG+ MMEEL+ M+ E+ ++YG + + P+W
Sbjct: 82 SATGMLGLPFLTGLPGFTNTKVYVTEVAARIGKPMMEELVEMHREFVRYYGPDTDASPKW 141
Query: 98 MKWEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILI 155
M+ EEL L S +K + ++L P + +V++C+ KVQ++++GEE C+NGI +
Sbjct: 142 MEGEELNELMSMSQKAVIEGRENDLTSLVPLYSPGNVEECMHKVQSVKYGEEVCFNGIFM 201
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLD 215
+KA SSGL++G W I + +I Y+ S F S HA+DFDY +++ +D+IL+SD SSL+
Sbjct: 202 LKASSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDFDYSSLKENDVILFSDFSSLN 261
Query: 216 STEDIDQ-----------------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSC 258
T++ ++ S F DD + +E + + N D+ EE+E+++FICSC
Sbjct: 262 DTDEDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPFVCNNDDITEEIERISFICSC 321
Query: 259 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 318
+VK+GGSVLIPI R+GV L LLE I+ + SSLK+PI++IS AEE+ A+TNT+PE
Sbjct: 322 IFGAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVPIFVISETAEEIFAFTNTLPE 381
Query: 319 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
WLCK RQEKLF+G+ LF HV+L+KE K+ +FP +HS LL W+EPCIV PHWSLRLGP
Sbjct: 382 WLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLAAWKEPCIVLCPHWSLRLGP 441
Query: 379 TIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQ 438
+HLLRRW D LLV+E AEL++ PF P++++VL+CSFLSG + K+ PLL +L+
Sbjct: 442 AVHLLRRWHADKRCLLVVEQGNGAELSLKPFMPLAIQVLECSFLSGVRAGKIDPLLGVLK 501
Query: 439 PKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLK 498
PK V+ PE ++ S V +S +YS+ +TI + +L+E E+ +A D+A + Q R L
Sbjct: 502 PKFVMLPEGLKSRCSIKGV-PWSFLYYSKGKTIELSNLREDIEVHLATDVAFRLQPRQLN 560
Query: 499 QKKLNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLHWGSPDPENLLAELSKMGING 557
+ + RL+ +L V++G++QL E +P S R LH + DP LL+ L + G+
Sbjct: 561 ETT-AVARLRTKLLVSNGRYQLASAEKQPDQSK--RHLLHCSTIDPGRLLSALREKGMVC 617
Query: 558 SVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
S D+ + +V V P +++ + TVI D+ +++I A+ ++ +GI
Sbjct: 618 SF--AADDSPTASESSVLVTSPGDALVRITPDTTVIYCDDERTSNQIYDALSSVCKGI 673
>gi|357126424|ref|XP_003564887.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9
homolog [Brachypodium distachyon]
Length = 707
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/607 (41%), Positives = 388/607 (63%), Gaps = 40/607 (6%)
Query: 39 SPMGMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 97
S GMLGLPFLTR+ F+ K+Y+TE AARIG+LMM EL+ M+ E+ ++YG + P+W
Sbjct: 111 SATGMLGLPFLTRLPCFANTKVYVTELAARIGKLMMRELVEMHSEFVRYYGPDIDGPPKW 170
Query: 98 MKWEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILI 155
M+ E+L+ L S L+K+ ++ +L P + + +C+ K Q +++ EE C+NG+L+
Sbjct: 171 MEGEKLDKLMSVLQKVVNEDEVKDLAPFMPLYSATSIDECMQKTQPVKYSEEVCFNGMLM 230
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLD 215
+KA SSGL++G C W I G + +I +S + F S HA+DFDY +++ +D+IL+SD SSL+
Sbjct: 231 LKASSSGLELGNCVWSIKGPRASITCLSSTVFVSAHALDFDYNSLKENDIILFSDFSSLN 290
Query: 216 STEDIDQS---SFSDDNN--------------------NWEELMNSLSNYDESVEEMEKL 252
+ ++ +++ + +D+N N ++ LS D+ +E+E++
Sbjct: 291 AMDEDNENLNVNGTDENGTLLCDDSVLSYFKSSRENGVNEDKNFQCLSINDDIADEIERI 350
Query: 253 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKI--PIYIISSVAEELL 310
FICSC +D++K+GGSVLIPI R+GV L +LE I+ + S++K+ PI++IS AE+ +
Sbjct: 351 GFICSCIMDAIKSGGSVLIPIGRLGVILLILEYISETLHFSNMKVIVPIFMISGAAEKTI 410
Query: 311 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
A+TN +PEWLCK RQEKLFSG+ LF HV+L+KE ++ +FP ++S LL W+EPCIVF P
Sbjct: 411 AFTNAVPEWLCKPRQEKLFSGEALFGHVELLKEGRLFLFPHLYSKGLLSAWKEPCIVFCP 470
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKV 430
HWSLR G +HLLRRW D +LLVLE DAELA+ PF P++M+VL+CSFLSG K +KV
Sbjct: 471 HWSLRHGTAVHLLRRWHADKRNLLVLEQGFDAELALKPFMPVAMQVLECSFLSGIKARKV 530
Query: 431 QPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIAS 490
PLL+IL+PKL+LFPE ++ + + +S HYS+ +TI IP+++E +L ++ D A
Sbjct: 531 NPLLRILKPKLILFPECMKSTCPLKEDSPWSFLHYSKGKTIGIPNIREEFKLRLSTDAAF 590
Query: 491 KFQWRMLKQKKLNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLHWGSPDPENLLAE 549
+ + I RL+G+L +++G++ L+ P+++ Q +HWG+ D + L+
Sbjct: 591 GL------DENITIARLRGKLHLSNGQYVLVAPKDQSDRPKQQ--LMHWGAVDSDRALSA 642
Query: 550 LSKMGINGSVE-RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAM 608
L GI S C + E ++ V P +++++V + TVI D+ RI A
Sbjct: 643 LQDRGIVCSFSADCYSSVGCER--SILVTSPGEALVKVTSERTVIYCDDEKTTKRIYDAF 700
Query: 609 ENILEGI 615
+I GI
Sbjct: 701 SSICNGI 707
>gi|218192422|gb|EEC74849.1| hypothetical protein OsI_10713 [Oryza sativa Indica Group]
Length = 713
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/601 (41%), Positives = 380/601 (63%), Gaps = 26/601 (4%)
Query: 39 SPMGMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 97
S G+LGLPFLTR+ GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P W
Sbjct: 115 SATGLLGLPFLTRLPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVW 174
Query: 98 MKWEELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
M+ E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L
Sbjct: 175 MEGEKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGML 234
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
++KA SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL
Sbjct: 235 MLKASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSL 294
Query: 215 DSTED---------IDQ--------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICS 257
+ D +D+ S F DD + +E + L + D+ EE+E+++FICS
Sbjct: 295 NGMYDDNKKMGEHIVDETDILLASNSVFRDDGMDEDETIKFLCSNDDIAEEIERISFICS 354
Query: 258 CAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNT 315
C ID++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE++ +TN
Sbjct: 355 CIIDAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEIITFTNA 414
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+PEWLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF PHWSLR
Sbjct: 415 LPEWLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFCPHWSLR 474
Query: 376 LGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLK 435
GP +HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K+ PLL
Sbjct: 475 HGPAVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGKIDPLLG 534
Query: 436 ILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWR 495
+L+PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A Q R
Sbjct: 535 LLKPKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVAFGLQPR 594
Query: 496 MLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGI 555
L K + RLK +L +++G++ L S+ R LHWG+ D + + L + GI
Sbjct: 595 QL-DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSALQEKGI 652
Query: 556 NGSVE-RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEG 614
S A S+ + + P +++++V + T I D+ A R+ A +I G
Sbjct: 653 VCSFSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDAFRSICNG 712
Query: 615 I 615
I
Sbjct: 713 I 713
>gi|222624545|gb|EEE58677.1| hypothetical protein OsJ_10103 [Oryza sativa Japonica Group]
Length = 713
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/601 (41%), Positives = 380/601 (63%), Gaps = 26/601 (4%)
Query: 39 SPMGMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 97
S G+LGLPFLTR GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P W
Sbjct: 115 SATGLLGLPFLTRFPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVW 174
Query: 98 MKWEELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
M+ E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L
Sbjct: 175 MEGEKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGML 234
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
++KA SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL
Sbjct: 235 MLKASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSL 294
Query: 215 DSTED---------IDQ--------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICS 257
+ D +D+ S F DD + +E + L + D+ EE+E+++FICS
Sbjct: 295 NGMYDDNKKMGEHIVDETDILLASNSVFRDDGMDEDETIKFLCSNDDIAEEIERISFICS 354
Query: 258 CAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNT 315
C ID++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE++ +TN
Sbjct: 355 CIIDAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEIITFTNA 414
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+PEWLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF PHWSLR
Sbjct: 415 LPEWLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFCPHWSLR 474
Query: 376 LGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLK 435
GP +HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K+ PLL
Sbjct: 475 HGPAVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGKIDPLLG 534
Query: 436 ILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWR 495
+L+PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A Q R
Sbjct: 535 LLKPKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVAFGLQPR 594
Query: 496 MLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGI 555
L K + RLK +L +++G++ L S+ R LHWG+ D + + L + GI
Sbjct: 595 QL-DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSALQEKGI 652
Query: 556 NGSVE-RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEG 614
S A S+ + + P +++++V + T I D+ A R+ A+ +I G
Sbjct: 653 VCSFSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDALRSICNG 712
Query: 615 I 615
I
Sbjct: 713 I 713
>gi|108707119|gb|ABF94914.1| expressed protein [Oryza sativa Japonica Group]
Length = 719
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/607 (41%), Positives = 381/607 (62%), Gaps = 32/607 (5%)
Query: 39 SPMGMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 97
S G+LGLPFLTR GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P W
Sbjct: 115 SATGLLGLPFLTRFPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVW 174
Query: 98 MKWEELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
M+ E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L
Sbjct: 175 MEGEKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGML 234
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
++KA SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL
Sbjct: 235 MLKASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSL 294
Query: 215 DSTED---------IDQS--------------SFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ D +D++ SF DD + +E + L + D+ EE+E+
Sbjct: 295 NGMYDDNKKMGEHIVDETDILLASNSVFSTEKSFRDDGMDEDETIKFLCSNDDIAEEIER 354
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEEL 309
++FICSC ID++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE+
Sbjct: 355 ISFICSCIIDAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEI 414
Query: 310 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 369
+ +TN +PEWLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF
Sbjct: 415 ITFTNALPEWLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFC 474
Query: 370 PHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 429
PHWSLR GP +HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K
Sbjct: 475 PHWSLRHGPAVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGK 534
Query: 430 VQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIA 489
+ PLL +L+PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A
Sbjct: 535 IDPLLGLLKPKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVA 594
Query: 490 SKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAE 549
Q R L K + RLK +L +++G++ L S+ R LHWG+ D + +
Sbjct: 595 FGLQPRQL-DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSA 652
Query: 550 LSKMGINGSVE-RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAM 608
L + GI S A S+ + + P +++++V + T I D+ A R+ A+
Sbjct: 653 LQEKGIVCSFSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDAL 712
Query: 609 ENILEGI 615
+I GI
Sbjct: 713 RSICNGI 719
>gi|242055337|ref|XP_002456814.1| hypothetical protein SORBIDRAFT_03g043310 [Sorghum bicolor]
gi|241928789|gb|EES01934.1| hypothetical protein SORBIDRAFT_03g043310 [Sorghum bicolor]
Length = 557
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 358/562 (63%), Gaps = 24/562 (4%)
Query: 73 MEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCP--CIA 130
MEEL+ M+ E+ ++YG + P+WM+ +E L S L+K + + ++ P +
Sbjct: 1 MEELVEMHYEFVRYYGPDTDVSPKWMEGKEFNELMSMLQKAVIEDKENDSACLVPLYSLG 60
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 190
++++C+ KVQ +++GEE C+NGI ++KA SSGL++G W I G + +I Y+ S F S
Sbjct: 61 NIEECMHKVQPVKYGEEVCFNGIFMLKASSSGLELGNSTWEIKGPRASITYLPSSVFVSA 120
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWE 233
HA+DFDY +++ +D+IL+SD SSL+ ++ ++ S DD + +
Sbjct: 121 HALDFDYSSLKENDVILFSDFSSLNDMDEDNEKLNEHSMDETDSSLCHYSVLRDDGADAD 180
Query: 234 ELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS 293
E + + N D+ EE+E+++FICSC D+VK+GGSVLIPI R+GV L LLE I+ + S
Sbjct: 181 EKVPFVCNNDDITEEIERISFICSCIFDAVKSGGSVLIPIGRLGVILLLLELISEMLHSS 240
Query: 294 SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVH 353
S+K+PI++IS AEE+ A+TN +PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +H
Sbjct: 241 SMKVPIFVISETAEEIFAFTNALPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLH 300
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPIS 413
S LL W+EPCIV PHWSLRLGP +HLLRRW D LLV+E DAEL++ PF P++
Sbjct: 301 SKGLLAAWKEPCIVLCPHWSLRLGPAVHLLRRWHADKRCLLVVEQGNDAELSLKPFMPLA 360
Query: 414 MKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHI 473
++VL+CSFLSG ++ K+ PLL++L+PK VL PE ++ +V +S +YS+ +TI +
Sbjct: 361 IQVLECSFLSGIRVGKIDPLLRMLKPKFVLLPEGLKSRCPIQEVP-WSFFYYSKGKTIEL 419
Query: 474 PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR 533
P+L+E E+ +A D+A + Q R L + + RL+ +L V++G+ QL + S+ R
Sbjct: 420 PNLREEFEVHLATDVAFRLQPRQLNETT-AVARLRTKLLVSNGRFQLASAEKQSDQSK-R 477
Query: 534 PFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVI 593
LH + DP LL+ L + G+ S D+ + +V + P +++++ + TVI
Sbjct: 478 HLLHCSTIDPGRLLSALQEKGMVCSF--AADDSSTASECSVLITSPGDALVKITSDRTVI 535
Query: 594 SAADKNLASRIVKAMENILEGI 615
++ ++I A+ ++ +GI
Sbjct: 536 YCDNERTCNQIYDALSSVCKGI 557
>gi|297788079|ref|XP_002862209.1| hypothetical protein ARALYDRAFT_359763 [Arabidopsis lyrata subsp.
lyrata]
gi|297307472|gb|EFH38467.1| hypothetical protein ARALYDRAFT_359763 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/397 (50%), Positives = 287/397 (72%), Gaps = 6/397 (1%)
Query: 225 FSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
FS+ N +N + +SL N ++S+EEM+KL FICSCA +S AGGS LI I R+G+ L
Sbjct: 6 FSERNILYIHNSSDNKDSLLNTEDSLEEMDKLEFICSCAAESSDAGGSTLITITRIGIVL 65
Query: 281 QLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
QLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+QRQEKL G+P F H+K
Sbjct: 66 QLLELMSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQRQEKLILGEPSFGHLKF 125
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEV 400
IK+KKIH+FPA+HSP L+ +WQEPCI+F+PHWSLRLGP++ LL+RW GD SLLVLE+ +
Sbjct: 126 IKDKKIHLFPAIHSPNLITSWQEPCIIFAPHWSLRLGPSVQLLQRWRGDPKSLLVLEDGI 185
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSF 460
+ L +LPF+PI+MK+LQCSFLSG +LQK+ LL +LQPK+VL P+ ++F+ + +
Sbjct: 186 SSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLLSVLQPKIVLVPDAVNQRINFAAMKTI 245
Query: 461 SVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKGRLFVNHGKHQ 519
S+ +Y EN+T+ +P + ++ +EI D+ASK WR L+Q++ I RLKG L + GKH+
Sbjct: 246 SILNYFENKTLRVPRIADNPSVEITTDLASKLSWRKLRQRENFGIARLKGGLLMEDGKHR 305
Query: 520 LLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQD 578
L+ E SS + RP HWGS PE+LL L K+GI GS+E+ + + S+D + + +
Sbjct: 306 LVSGLEQEESSGKARPLRHWGSVAPESLLDALLKIGIQGSLEQSIGETGSDDNSIIHIAN 365
Query: 579 PEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
P +IEV T I D+N+ S++++A++ IL+ +
Sbjct: 366 PSSGLIEVSEMGTAIITDDENVGSQVLQAIDGILDAL 402
>gi|293333207|ref|NP_001167979.1| hypothetical protein [Zea mays]
gi|223945265|gb|ACN26716.1| unknown [Zea mays]
gi|414879104|tpg|DAA56235.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
gi|414879105|tpg|DAA56236.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 492
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 319/496 (64%), Gaps = 24/496 (4%)
Query: 138 KVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDY 197
KVQ++++GEE C+NGI ++KA SSGL++G W I + +I Y+ S F S HA+DFDY
Sbjct: 3 KVQSVKYGEEVCFNGIFMLKASSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDFDY 62
Query: 198 RAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWEELMNSLS 240
+++ +D+IL+SD SSL+ T++ ++ S F DD + +E + +
Sbjct: 63 SSLKENDVILFSDFSSLNDTDEDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPFVC 122
Query: 241 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 300
N D+ EE+E+++FICSC +VK+GGSVLIPI R+GV L LLE I+ + SSLK+PI+
Sbjct: 123 NNDDITEEIERISFICSCIFGAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVPIF 182
Query: 301 IISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMN 360
+IS AEE+ A+TNT+PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +HS LL
Sbjct: 183 VISETAEEIFAFTNTLPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLAA 242
Query: 361 WQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCS 420
W+EPCIV PHWSLRLGP +HLLRRW D LLV+E AEL++ PF P++++VL+CS
Sbjct: 243 WKEPCIVLCPHWSLRLGPAVHLLRRWHADKRCLLVVEQGNGAELSLKPFMPLAIQVLECS 302
Query: 421 FLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESA 480
FLSG + K+ PLL +L+PK V+ PE ++ S V +S +YS+ +TI + +L+E
Sbjct: 303 FLSGVRAGKIDPLLGVLKPKFVMLPEGLKSRCSIKGV-PWSFLYYSKGKTIELSNLREDI 361
Query: 481 ELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLHWG 539
E+ +A D+A + Q R L + + RL+ +L V++G++QL E +P S R LH
Sbjct: 362 EVHLATDVAFRLQPRQLNETT-AVARLRTKLLVSNGRYQLASAEKQPDQSK--RHLLHCS 418
Query: 540 SPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKN 599
+ DP LL+ L + G+ S D+ + +V V P +++ + TVI D+
Sbjct: 419 TIDPGRLLSALREKGMVCSF--AADDSPTASESSVLVTSPGDALVRITPDTTVIYCDDER 476
Query: 600 LASRIVKAMENILEGI 615
+++I A+ ++ +GI
Sbjct: 477 TSNQIYDALSSVCKGI 492
>gi|302803558|ref|XP_002983532.1| hypothetical protein SELMODRAFT_445533 [Selaginella moellendorffii]
gi|300148775|gb|EFJ15433.1| hypothetical protein SELMODRAFT_445533 [Selaginella moellendorffii]
Length = 1469
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 319/607 (52%), Gaps = 46/607 (7%)
Query: 40 PMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWM 98
P ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++
Sbjct: 878 PESMLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFT 937
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
+ E +P AL+ LGE S + V C+ ++QTLR+GEEA +G +++
Sbjct: 938 QCE----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVL 993
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSL 214
+SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S
Sbjct: 994 TPYSSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPT 1053
Query: 215 DSTEDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFI 255
S E ++ + F +N + NS+ + ++ LA +
Sbjct: 1054 SSVEKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQV 1113
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 315
+ A D++ GGSVLIP + L+L+E I+ + C+ + I+ +S A+E LA+TNT
Sbjct: 1114 ANAAADALSKGGSVLIPTSVSDTVLELIETISQEVSCAKVSGKIFYVSPSAQEFLAFTNT 1173
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+PEWL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++ + PC++ + H SLR
Sbjct: 1174 VPEWLSSSRQEKLYNGESLFGHVELLKEGKLSHFPSL-SPEVVESG--PCVILASHVSLR 1230
Query: 376 LGPTIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSF-LSGKKLQKVQPL 433
+GP++H+L RW ++LL+L E ++D E +LPFKP+S++V S + + L
Sbjct: 1231 MGPSVHILNRWRQHSSNLLILTEPDIDVERFLLPFKPLSIQVKHFPLATSARSRGALSSL 1290
Query: 434 LKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQ 493
+ LQPK + PE ++ V+ SD + + Y + IPSL+E +E++AD+A++ +
Sbjct: 1291 IDRLQPKFAVVPERLKSVVT-SDCDT-KILFYVHRAPLKIPSLEEELNMELSADLATRIK 1348
Query: 494 WRMLKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELS 551
+ + + RL + G L P S + P G+PD + LL L
Sbjct: 1349 PKQTRTGNNAALARLSAEMHFYDGNFYL---EMPRVSRMIQTPQRFCGTPDVDALLRALR 1405
Query: 552 KMGINGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKAM 608
+ G+ V+ + AE DG V V + IE+ + T+I +D L I A+
Sbjct: 1406 EKGL---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDPVLRRLIADAV 1462
Query: 609 ENILEGI 615
+ L+ I
Sbjct: 1463 ISCLQII 1469
>gi|302784170|ref|XP_002973857.1| hypothetical protein SELMODRAFT_414250 [Selaginella moellendorffii]
gi|300158189|gb|EFJ24812.1| hypothetical protein SELMODRAFT_414250 [Selaginella moellendorffii]
Length = 1497
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 319/607 (52%), Gaps = 46/607 (7%)
Query: 40 PMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWM 98
P ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++
Sbjct: 906 PESMLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFT 965
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
+ E +P AL+ LGE S + V C+ ++QTLR+GEEA +G +++
Sbjct: 966 QCE----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVL 1021
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSL 214
+SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S
Sbjct: 1022 TPYSSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPT 1081
Query: 215 DSTEDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFI 255
S E ++ + F +N + NS+ + ++ LA +
Sbjct: 1082 SSVEKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQV 1141
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 315
+ A D++ GGSVLIP + L+L+E I+ + C+ + I +S A+E LA+TNT
Sbjct: 1142 ANAAADALSKGGSVLIPTSVSDTVLELIETISQEVSCAKVSGRILYVSPSAQEFLAFTNT 1201
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+PEWL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++ + PC++ + H SLR
Sbjct: 1202 VPEWLSSARQEKLYNGESLFGHVELLKEGKLSYFPSL-SPEVVESG--PCVILASHVSLR 1258
Query: 376 LGPTIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSF-LSGKKLQKVQPL 433
+GP++H+L RW ++LL+L E ++D E +LPFKP+S++V S + + L
Sbjct: 1259 MGPSVHILNRWRQHSSNLLILTEPDIDVERFLLPFKPLSIQVKHFPLATSARSRGALSSL 1318
Query: 434 LKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQ 493
+ LQPK + PE ++ V+ SD + + Y + IPSL+E +E++AD+AS+ +
Sbjct: 1319 IDRLQPKFAVVPERLKSVVT-SDCDT-KILFYVHRAPLKIPSLEEELNMELSADLASRIK 1376
Query: 494 WRMLKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELS 551
+ + + RL + + G L P S + P G+PD + LL L
Sbjct: 1377 PKQTRSGNNAALARLSAEMHFHDGNFYL---EMPRVSRMIQAPQRFCGTPDVDALLRALR 1433
Query: 552 KMGINGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKAM 608
+ G+ V+ + AE DG V V + IE+ + T+I +D L I A+
Sbjct: 1434 EKGL---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDAVLRRLIADAV 1490
Query: 609 ENILEGI 615
+ L+ I
Sbjct: 1491 ISCLQII 1497
>gi|6041848|gb|AAF02157.1|AC009853_17 hypothetical protein [Arabidopsis thaliana]
Length = 620
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 173/247 (70%), Gaps = 7/247 (2%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
+PMG+LGLPFLT+ GF AKIY+TE A+IGQLMME+++ M+ E+R F+G + SS P W+
Sbjct: 109 NPMGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWI 168
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
K + E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LII
Sbjct: 169 KNLDSEQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLII 228
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS 216
KA SSGLDIGACNW+I+G G+++Y+S S F S HA FD+ ++ +D+++YSD SSL S
Sbjct: 229 KALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQS 288
Query: 217 TEDIDQSSFS-DDNNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
E + S D +NN+ + +SL N ++S+EEMEKLAF+CSCA +S AGGS LI
Sbjct: 289 AEVTEDGCISPDSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGSTLI 348
Query: 272 PINRVGV 278
I R+G+
Sbjct: 349 TITRIGI 355
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
Query: 391 NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT 450
NS L L+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ L+ +LQPK+ L P+
Sbjct: 395 NSSLALDG-ISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLVSVLQPKIFLVPDAVNQ 453
Query: 451 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKG 509
+S + + + S+ +Y EN+T+H+P + ++ +EI D+ASK WR L+Q++ I RLKG
Sbjct: 454 RISLAAIKTISILNYFENKTLHVPRIVDNPSVEITTDLASKLSWRKLRQRESFGIARLKG 513
Query: 510 RLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAES 568
L + GKH+L+ E SS + RP HWGS PE LL L KMGI GS+E+ D S
Sbjct: 514 GLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPELLLDALLKMGIKGSIEQSTGDNGS 573
Query: 569 EDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
ED + +++P +IE T I D+N+ S++ +A++ +L+GI
Sbjct: 574 EDKSIIHIENPNSGLIEFSEMGTAIITGDENVVSQVFQAIDGVLDGI 620
>gi|224129960|ref|XP_002328846.1| predicted protein [Populus trichocarpa]
gi|222839144|gb|EEE77495.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
Query: 404 LAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVS 463
+A+LPFKP++MKVLQCSFLSG +LQK QPLL++L+PK VLFPE+ R + FS SFSV
Sbjct: 1 MALLPFKPMAMKVLQCSFLSGIRLQKTQPLLEMLRPKEVLFPEDLREQIKFSGSHSFSVF 60
Query: 464 HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPE 523
+Y+ENET+ +P K S +LEIA+++A++F WR L ++ITRL+G+LF++HGKHQ+L
Sbjct: 61 YYAENETLGVPRSKGSVDLEIASNLATQFSWRKLDHDDVDITRLEGQLFIDHGKHQVLSG 120
Query: 524 NEPGG-SSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKS 582
N+ +S+ +P LHWG PD E LL LSKMG+ GSVERCM+DAES V + +P K+
Sbjct: 121 NKVSEMASRKKPLLHWGVPDVEKLLTVLSKMGVKGSVERCMSDAESGSDEIVHIHEPSKA 180
Query: 583 MIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
+IEVRA TVISA D+ LAS I +A+ + GI
Sbjct: 181 LIEVRATRTVISARDEQLASLIFEAIGTLTGGI 213
>gi|414879103|tpg|DAA56234.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 254
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 167/245 (68%), Gaps = 17/245 (6%)
Query: 138 KVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDY 197
KVQ++++GEE C+NGI ++KA SSGL++G W I + +I Y+ S F S HA+DFDY
Sbjct: 3 KVQSVKYGEEVCFNGIFMLKASSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDFDY 62
Query: 198 RAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWEELMNSLS 240
+++ +D+IL+SD SSL+ T++ ++ S F DD + +E + +
Sbjct: 63 SSLKENDVILFSDFSSLNDTDEDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPFVC 122
Query: 241 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 300
N D+ EE+E+++FICSC +VK+GGSVLIPI R+GV L LLE I+ + SSLK+PI+
Sbjct: 123 NNDDITEEIERISFICSCIFGAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVPIF 182
Query: 301 IISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMN 360
+IS AEE+ A+TNT+PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +HS LLM
Sbjct: 183 VISETAEEIFAFTNTLPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLME 242
Query: 361 WQEPC 365
C
Sbjct: 243 GALYC 247
>gi|196014414|ref|XP_002117066.1| hypothetical protein TRIADDRAFT_32062 [Trichoplax adhaerens]
gi|190580288|gb|EDV20372.1| hypothetical protein TRIADDRAFT_32062 [Trichoplax adhaerens]
Length = 552
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 247/487 (50%), Gaps = 49/487 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LP++T F KIY TE ++G+L+MEEL+ N ++ +S +W + +
Sbjct: 101 MLALPYITERCEFHGKIYATEPTLQMGKLLMEELVFYNERV-----SKSNSINEWKQPDI 155
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
+ LPS L + G+ + I V+ C+SKVQ +R E+ G + A SSG
Sbjct: 156 IRFLPSPLNQ--FGDIAA--WKSIYTIKEVEACLSKVQAVRHLEKLDLFGAFNVTALSSG 211
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+G+ NWI+ I+Y+S S+ S H M D A++ SD+++ + LS +
Sbjct: 212 FCLGSSNWILESPYEKISYLSCSSIFSTHPMPLDQEALKKSDIVILTGLSQVPYA----- 266
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
N ++L+ L N LAF ++K GG+VLIP G+ L
Sbjct: 267 --------NPDQLVTELCN---------NLAF-------TLKNGGNVLIPSYPTGIIYDL 302
Query: 283 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
LE + FM+ S L IPIY IS VA+ LA++N EWLC +Q+K++ +P F H L+
Sbjct: 303 LECLCTFMDQSGLGNIPIYFISPVADSSLAFSNIYGEWLCNTKQDKVYLPEPPFIHADLV 362
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEV 400
K K++ FP + + +PC+VF+ H LR+G +H + W D +S++ +E +
Sbjct: 363 KTKRLQHFPNLQD-GFGDVFSQPCVVFAGHPCLRIGDAVHFMEMWRNDEKSSVIFIEPDF 421
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSD--- 456
E A+ PF+P+SMK C +V LL+ ++P+ ++ PE + R + +F
Sbjct: 422 PYEDALAPFQPLSMKAFYCPIDHRLNFNQVNKLLQDIKPQRLVLPESYVRPYDAFGRRIE 481
Query: 457 --VTSFSVSH-YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
V + +H Y++ + + +P ++ ++ I+ ++AS+ + L I ++G L V
Sbjct: 482 HYVNASVPTHPYNKGDVLALPLKRQYEKVVISNELASQLHLSEVNNSTL-IASVRGSLHV 540
Query: 514 NHGKHQL 520
KH L
Sbjct: 541 CDNKHTL 547
>gi|390341842|ref|XP_783183.3| PREDICTED: integrator complex subunit 9-like [Strongylocentrotus
purpuratus]
Length = 661
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 241/503 (47%), Gaps = 52/503 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
MLGLPF+T GF IY TE +IG+ MMEEL+ EY + + SS W K +
Sbjct: 109 MLGLPFITEFTGFKGVIYATEPTIQIGRQMMEELV----EYMERVPKKHSSS-LWKKPDL 163
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAH--VKDCISKVQTLRFGEEACYNGILIIKAFS 160
L+ LP+ L+ D LG C + V C+SK+ F E+ G L + S
Sbjct: 164 LKTLPAPLK------DVKWLGCWKKCYSKHDVNACLSKITNAAFSEKLSLFGALTLVPLS 217
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+CNWIIS A ++Y+S S+F + H+M + ++ SD+I+ + L+ +
Sbjct: 218 SGFCLGSCNWIISSAYEKVSYVSASSFLTTHSMPINQDPLKNSDVIVLTGLTQTPA---- 273
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
N D + E CS ++K+GG+VL+P GV
Sbjct: 274 -------------------HNPDSMLGEF------CSTLTMTIKSGGNVLVPCYPSGVIY 308
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E +A +ME L + P+Y IS VA+ LA++ + EWLC +Q K++ +P F H +
Sbjct: 309 DLFECLAGYMESVGLMQTPLYFISPVADSSLAFSQILSEWLCGVKQSKVYLPEPPFPHAE 368
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
LIK ++ FP+ H + ++ PC+VF+ H SLR+G +H + W + +N++L +E
Sbjct: 369 LIKNGRLKHFPSRHG-EFSNQFKTPCVVFTGHPSLRMGDAVHFMEMWGKNSNNTVLFIEP 427
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVT 458
A+ P++P++MK C + PL +L + PE
Sbjct: 428 SFPYLDALAPYQPLAMKA--CYYFECIMSLLDSPLQVVLPESYLNPPESHPLRTDLVVEV 485
Query: 459 SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKH 518
+ + YS ++ I + + ++EI ++AS L Q + ++ + G L V+ K
Sbjct: 486 DPAATPYSRDDVISLLVKRRYEKVEITPEVASSLAPVEL-QPGVLVSTVTGHLNVHDNKF 544
Query: 519 QLLPENEPGGSSQTRPFLHWGSP 541
L E P S Q P L G P
Sbjct: 545 IL--EELP--SPQANPLLPTGQP 563
>gi|156378291|ref|XP_001631077.1| predicted protein [Nematostella vectensis]
gi|193806037|sp|A7SBF0.1|INT9_NEMVE RecName: Full=Integrator complex subunit 9 homolog
gi|156218110|gb|EDO39014.1| predicted protein [Nematostella vectensis]
Length = 660
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 277/590 (46%), Gaps = 71/590 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF+ KIY TE +IG+ +M EL+ + +G W
Sbjct: 111 MLALPFITEYSGFNGKIYATEPTIQIGRDLMLELVTFAERV-----PKRRNGNMWKNDNV 165
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
+ LP+ L ++A + L VK CISK+Q + + E+ GIL + A SSG
Sbjct: 166 IRCLPAPLNELANVKSWRVLYSK----HDVKACISKIQAVSYSEKLDLCGILQLSAHSSG 221
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+G+ NW++ I+Y+S S+ + H + + ++ SD+++ + ++
Sbjct: 222 FCLGSSNWMLESEYEKISYLSPSSSFTTHPLPLNQTVLKNSDVLIITGVTEA-------- 273
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
+ N D + E C+ +++AGG+VL+P GV L
Sbjct: 274 ---------------PIDNPDAMLGEF------CTHLASTLRAGGNVLVPCYPSGVLYDL 312
Query: 283 LEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
E + +++ + L +PIY IS VA+ LAY+N EWLC+ +Q K++ +P F H +L+
Sbjct: 313 FECLYTYLDNAKLGMVPIYFISPVADSSLAYSNIYGEWLCQSKQTKVYLPEPPFPHAELL 372
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEV 400
KE ++ VF +H+ +++ PC+VF+ H SLR G +H + W +N+++ E +
Sbjct: 373 KEARLKVFSNLHN-GFSSSFKTPCVVFTGHPSLRYGDAVHFMEIWGKSGNNTVIFTEPDF 431
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 451
A+ P++P++MK C + LLK LQP+ ++ PE + RT
Sbjct: 432 PYLEALAPYQPLAMKTCYCPIDPRLNFAQANKLLKELQPRHLVMPESYSRPPVIHPHRTD 491
Query: 452 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
++ D S++ ++ + +P + ++ IA +++S + ++ + + L G L
Sbjct: 492 LTIED-PGCSLTTFNHLDVAALPISRSFEKVVIANELSSCLHPQHVR-PGVAVATLTGTL 549
Query: 512 FVNHGKHQLLP---------ENEPGGSSQTRPFLH---WGSPDPENLLAELSKMGINGSV 559
K+ L P +E G SS + L WG+ ++ + L K GI
Sbjct: 550 VTKDNKYTLQPLEFLVEPKAGSEGGDSSTNKGQLSRHLWGTVQLDDFVRSLKKRGITD-- 607
Query: 560 ERCMTDAESEDG-FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAM 608
+ ES G T+ + + + ++ R + +I+ ++ L RI A+
Sbjct: 608 ----VNVESSGGEHTIHLPNDDAMILLDRGSTHIITHGNEELRIRIRDAL 653
>gi|260788554|ref|XP_002589314.1| hypothetical protein BRAFLDRAFT_217919 [Branchiostoma floridae]
gi|229274491|gb|EEN45325.1| hypothetical protein BRAFLDRAFT_217919 [Branchiostoma floridae]
Length = 665
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 270/581 (46%), Gaps = 82/581 (14%)
Query: 43 MLGLPFLTRMEGFSAK--IYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+L LP++T GF+ IY TE A++G+ +MEEL+ + A KW
Sbjct: 114 ILALPYITEYTGFNGTGMIYATEPTAQMGRQLMEELVQHTERVPKTCTAS--------KW 165
Query: 101 EE---LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 157
+E ++LP+ LR G + + L C + V +SKVQ + + ++ G L I
Sbjct: 166 KEPGVFKMLPAQLRD---GLNPASLRD-CYGLHDVNSALSKVQLVGYAQKLDVFGALQIM 221
Query: 158 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 217
SSG IG+CNW+I I+YIS S+ + H D +Q +D+++ + L+
Sbjct: 222 PLSSGYCIGSCNWLIQSHYEKISYISSSSVLTTHPQPMDQGPLQNTDVLILAGLTQ---- 277
Query: 218 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 277
+ +N D + E CS +VK GG+VL+P G
Sbjct: 278 -------------------SPTANPDSMLSEF------CSHLAVTVKNGGNVLVPCYPSG 312
Query: 278 VFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFA 336
V L E +A+F++ S L ++P+Y +S +A+ LAY+N EWLC+ +Q K++ + F
Sbjct: 313 VVYDLFECLAVFLDNSGLMQLPVYFVSPMADSSLAYSNIFAEWLCQSKQSKVYLPEAPFV 372
Query: 337 HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLV 395
H +L ++ VFP+VH ++ PC+VF+ H +LR G +H + W N+++
Sbjct: 373 HEELKTISRLKVFPSVHG-DFSSEFKTPCVVFAGHPTLRFGDGVHFMEIWGQSKANTVIF 431
Query: 396 LENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF- 454
+E ++ A+ PF+P++MK + C + Q+ ++ L+P V+ PE + T
Sbjct: 432 VEPDIPYLDALAPFQPLAMKAVHCPIDTRLSFQQANKIISDLKPLHVVLPETYITPPPSL 491
Query: 455 ---SDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLK 508
SD+ + Y E + +P + ++EI ++AS ++Q + + +
Sbjct: 492 PQRSDLVLEADPPPTTYQRGEVLSLPIKRMYEKIEITPELASALVPSEIRQ-GVAVASVT 550
Query: 509 GRLFVNHGKH--QLLPENEPGGSSQTR----------PFLH-WGSPDPENLLAELSKMGI 555
G L + Q +P+ G Q R P H WG+ E + +L K G+
Sbjct: 551 GVLEAKDNNYVLQSVPKQPTAGPGQKRKREDNADFAPPKPHVWGAVQVEQFVQDLEKGGV 610
Query: 556 NGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVTVI 593
TD + ED G + +Q E ++I++ T I
Sbjct: 611 --------TDVKVEDTPSGHIIHLQS-EDTLIQIEDGSTHI 642
>gi|321469645|gb|EFX80624.1| hypothetical protein DAPPUDRAFT_303892 [Daphnia pulex]
Length = 650
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 266/579 (45%), Gaps = 73/579 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF ++Y TE +IG+L MEEL+ Y + +W++
Sbjct: 109 MLALPFITEETGFKGRVYATEPTLQIGRLYMEELVN--------YLERTPKNQRANRWKQ 160
Query: 103 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
L+ LP L D ++ + ++KV+ + F E+ G L + A SS
Sbjct: 161 VLQSLPPPLSGALRPNDWKKVYS----TKAINAALAKVRMVGFNEKIDICGALTVMAVSS 216
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+CNWII IAY+S S+ + H D A++ +DL++ + L+
Sbjct: 217 GYSLGSCNWIIHSGYEKIAYVSASSTLTTHPRPMDQVALRNADLLILTALTQ-------- 268
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++N D + E C ++++GGS L+P + G+
Sbjct: 269 ---------------TPVANPDSMLGEF------CMAVASTLRSGGSCLVPCHPSGLLYD 307
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
L E +++ ++ L +IP++ S VAE LAY+N EWL +Q K++ + F H L
Sbjct: 308 LFECLSVHLDNIGLSQIPLFFFSPVAETSLAYSNIFAEWLSSGKQSKVYLPEEPFPHAHL 367
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN-SLLVLENE 399
IK ++ FP++H+ +++PC+VF H SLR G +H + W N S++ +E +
Sbjct: 368 IKNGRLKHFPSLHAEGFTNEYRQPCVVFCGHPSLRFGNVVHFIELWGSHSNHSIVFVEPD 427
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 450
A+ P++P++MK++ C + + L++ L+P +L P+ + R+
Sbjct: 428 FPYLEALAPYQPLTMKIVHCPIDTSLSFTQANKLIRDLKPGNLLVPDVYLHPPVSAPLRS 487
Query: 451 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
+ ++ ++ S + + +P ++ ++ + +AS+ + K L+ + L G+
Sbjct: 488 DLVIQELDPPALGMKSY-QVLQLPIKRKQEKVHLDPALASRLEPIQFK-TGLSASTLTGK 545
Query: 511 LFVNHGKHQLLPENEPGG------SSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMT 564
L K L NE G S + P WGS D LL LS+ G +
Sbjct: 546 LDARDNKFTLKVLNEEEGGTLYSASERMLPRHPWGSVDTTQLLHLLSQHG--------LL 597
Query: 565 DAESED---GFTVKVQDPEKSMIEVRAAVTVISAADKNL 600
DA ED G + + E ++I++ + T + D+ L
Sbjct: 598 DARVEDTPRGVVIHLPR-EDTVIQLEGSNTHVYCHDEAL 635
>gi|395842349|ref|XP_003793980.1| PREDICTED: integrator complex subunit 9 [Otolemur garnettii]
Length = 658
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 261/557 (46%), Gaps = 62/557 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GFS +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFSGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKSKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E C + V +SK++ + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEASTWRRCYTMQEVNAALSKIRLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +M+ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYMDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 458 TSFSV------SHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLVIDCQPPATSYRRAEVLTLPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVL 544
Query: 512 FVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAE 567
+ KH L P P SS+ R + PD ++ K ++GS VE+ + E
Sbjct: 545 YTKDNKHVLQPPPRPAQPTSSKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLE 599
Query: 568 SEDGFTVKVQDPEKSMI 584
+KV+D K I
Sbjct: 600 KHGFSDIKVEDTAKGHI 616
>gi|427789017|gb|JAA59960.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Rhipicephalus pulchellus]
Length = 650
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 250/532 (46%), Gaps = 61/532 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 101
ML LP++T GF +Y+TE IG+ MEEL+ E + P+ +W+
Sbjct: 108 MLALPYVTERTGFKGTVYMTEPTLLIGRQFMEELVTY---------IERTPKPRTATRWK 158
Query: 102 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159
+ L L + LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 159 QQALKFQQLPSLDLGKPRSWRQLYS----MQDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 214
Query: 160 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 219
SSG +G+CNWI++ I Y+SGS+ + H ++ ++ +D ++ L+SL T
Sbjct: 215 SSGYCLGSCNWIVTADHEKIVYMSGSSTLTTHPKPIEHGPLRNADALI---LTSLTQT-- 269
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
L+N D + E C +VK GG+VLIP GV
Sbjct: 270 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 305
Query: 280 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 338
L E ++ +E + + +P+Y +S VAE LAY++ + EWL +Q K++ + F H
Sbjct: 306 YDLFECLSGHLETTGQVNVPMYFLSPVAENSLAYSSILAEWLSSAKQAKVYIPEEPFPHA 365
Query: 339 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 397
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 366 QLVRGGRLKPFSSIKAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSPNNVVIFTE 425
Query: 398 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF--- 454
+ + A+ PF+P++MK L + + L++ L+P ++ P ++
Sbjct: 426 PDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQANKLIRDLKPTNLVLPLQYTLPPPLQPH 485
Query: 455 -SDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
SD+ V Y+ +HIP + +E+ A++A +K L I L G
Sbjct: 486 RSDLVIEAECEVQTYTRGSIVHIPVQRRYQRIEMTAELAESVVPVEVK-CGLGIATLTGA 544
Query: 511 LFVNHGKHQLLP-ENEPGGS----SQTRPFLH-WGSPDPENLLAELSKMGIN 556
L VN+ + L P + EP GS QT P ++ WGS D +L K G
Sbjct: 545 LHVNNNRCMLKPLQKEPSGSKKWNGQTPPKIYTWGSLDVTEFARKLDKAGFT 596
>gi|427798153|gb|JAA64528.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit, partial [Rhipicephalus pulchellus]
Length = 644
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 250/532 (46%), Gaps = 61/532 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 101
ML LP++T GF +Y+TE IG+ MEEL+ E + P+ +W+
Sbjct: 139 MLALPYVTERTGFKGTVYMTEPTLLIGRQFMEELVTY---------IERTPKPRTATRWK 189
Query: 102 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159
+ L L + LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 190 QQALKFQQLPSLDLGKPRSWRQLYS----MQDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 245
Query: 160 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 219
SSG +G+CNWI++ I Y+SGS+ + H ++ ++ +D ++ L+SL T
Sbjct: 246 SSGYCLGSCNWIVTADHEKIVYMSGSSTLTTHPKPIEHGPLRNADALI---LTSLTQT-- 300
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
L+N D + E C +VK GG+VLIP GV
Sbjct: 301 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 336
Query: 280 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 338
L E ++ +E + + +P+Y +S VAE LAY++ + EWL +Q K++ + F H
Sbjct: 337 YDLFECLSGHLETTGQVNVPMYFLSPVAENSLAYSSILAEWLSSAKQAKVYIPEEPFPHA 396
Query: 339 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 397
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 397 QLVRGGRLKPFSSIKAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSPNNVVIFTE 456
Query: 398 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF--- 454
+ + A+ PF+P++MK L + + L++ L+P ++ P ++
Sbjct: 457 PDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQANKLIRDLKPTNLVLPLQYTLPPPLQPH 516
Query: 455 -SDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
SD+ V Y+ +HIP + +E+ A++A +K L I L G
Sbjct: 517 RSDLVIEAECEVQTYTRGSIVHIPVQRRYQRIEMTAELAESVVPVEVKC-GLGIATLTGA 575
Query: 511 LFVNHGKHQLLP-ENEPGGS----SQTRPFLH-WGSPDPENLLAELSKMGIN 556
L VN+ + L P + EP GS QT P ++ WGS D +L K G
Sbjct: 576 LHVNNNRCMLKPLQKEPSGSKKWNGQTPPKIYTWGSLDVTEFARKLDKAGFT 627
>gi|75076201|sp|Q4R5Z4.1|INT9_MACFA RecName: Full=Integrator complex subunit 9; Short=Int9
gi|67970276|dbj|BAE01481.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 154/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + F ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGFSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 548 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 595
>gi|223555970|ref|NP_001138631.1| integrator complex subunit 9 isoform 2 [Homo sapiens]
gi|114619533|ref|XP_001166880.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pan troglodytes]
gi|221043268|dbj|BAH13311.1| unnamed protein product [Homo sapiens]
Length = 637
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 548 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 595
>gi|297682597|ref|XP_002819003.1| PREDICTED: integrator complex subunit 9 isoform 2 [Pongo abelii]
gi|383419915|gb|AFH33171.1| integrator complex subunit 9 isoform 2 [Macaca mulatta]
Length = 637
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 548 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 595
>gi|332247651|ref|XP_003272973.1| PREDICTED: integrator complex subunit 9 isoform 3 [Nomascus
leucogenys]
Length = 637
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIRSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGSV--ERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS+ E+ + E +KV+D K I
Sbjct: 548 KRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTLEKHGFSDIKVEDTAKGHI 595
>gi|297682599|ref|XP_002819004.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pongo abelii]
gi|332825770|ref|XP_003311697.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|410041655|ref|XP_003311698.2| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
Length = 552
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 492
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|405951103|gb|EKC19045.1| Integrator complex subunit 9 [Crassostrea gigas]
Length = 1785
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 256/564 (45%), Gaps = 66/564 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LP++T GF +Y TE +IG+ MEEL+ Y + KW+
Sbjct: 119 MLALPYVTEYSGFKGTVYCTEPTQQIGRQYMEELVT--------YVERNPRNKKCSKWKS 170
Query: 103 ---LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159
L LP+ LR+ E C ++ C+S+VQT+ + E+ G LII A
Sbjct: 171 DAILSSLPTFLREAIRPTAWRE----CYTKHDIQACLSRVQTVGYNEKRNIYGALIITAC 226
Query: 160 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 219
SSG IG+CNW I I YISG++ + H D ++ SDLI+ S ++
Sbjct: 227 SSGYSIGSCNWTIKSPYQKICYISGTSTLTTHPKPMDTEPLRQSDLIIVSSMTKTPGY-- 284
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
N D+ + E C + ++K GG+VL+P G+
Sbjct: 285 ---------------------NPDQMIGE------FCMNTVVTIKNGGNVLVPCYPSGMI 317
Query: 280 LQLLEQIAIFME-CSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 338
L E ++ ++ C +P+Y +S V++ LAY+N EWL +Q +++ +P F H
Sbjct: 318 FDLFECLSSHLDSCGLTTVPLYFLSPVSDSSLAYSNIYAEWLSGSKQSRVYLPEPPFPHA 377
Query: 339 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLE 397
+L+ ++ + +H L +++ PCIVF+ H SLR+G +H + W N++L E
Sbjct: 378 ELVSIGRLRQYLNIHD-GLQNDFKSPCIVFAGHPSLRMGDVVHFIELWGKSTSNTILFTE 436
Query: 398 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSD 456
+ A+ PF+P+ MKV C +G + L++ L+P ++ E + + + S
Sbjct: 437 PDFPYLEALAPFQPLQMKVCYCPIDTGLSFSQANKLMRDLKPGHLVVAESYVQPPSNLSH 496
Query: 457 VTSFSVSH------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
T V + Y E + +P ++ +EI ++A +K + ++ +
Sbjct: 497 KTDMVVDYDPPPLTYKRGEILTLPIKRQFETVEITPNLAKNVSPVEVKPGCM-VSMVTAA 555
Query: 511 LFVNHGKH--QLLPENEPGGSSQT--------RPFLHWGSPDPENLLAELSKMGINGSVE 560
L + K+ +LLP+ G + + ++ WGS + ++ + L++ GI
Sbjct: 556 LNIKDNKYTLELLPDGHLSGKKRRADGSLIREKSYI-WGSLNIQSFVDALTRQGITDIKV 614
Query: 561 RCMTDAESEDGFTVKVQDPEKSMI 584
D D ++K++ E S++
Sbjct: 615 EDTEDGSIIDLCSIKMEKLEASVV 638
>gi|335300989|ref|XP_001929033.3| PREDICTED: integrator complex subunit 9 [Sus scrofa]
Length = 667
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 161/608 (26%), Positives = 279/608 (45%), Gaps = 89/608 (14%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQMVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR------------PFLHWGSPDPENLLAELSKMG 554
L KH L P P GG + R P L GS E + L K G
Sbjct: 438 LHTKDNKHVLQPPPRPAQPVGGKKRKRASEEVPDCKVVKPLLS-GSIPVEQFVQTLEKHG 496
Query: 555 INGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVT-VISAADKNLASR----IVK 606
+D + ED G V +Q+ E ++I++ T +I D+ L R ++K
Sbjct: 497 --------FSDIKVEDTAKGHIVLLQEAE-TLIQIEEDSTHIICDNDEMLRVRLRDLVLK 547
Query: 607 AMENILEG 614
++ +L G
Sbjct: 548 FLKKVLRG 555
>gi|348587992|ref|XP_003479751.1| PREDICTED: integrator complex subunit 9-like [Cavia porcellus]
Length = 659
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 258/557 (46%), Gaps = 62/557 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 108 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 162
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 163 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 216
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 217 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 272
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 273 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 307
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 308 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 367
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 368 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 427 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 486
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
V Y E + +P + ++EI ++A +K +++ + L
Sbjct: 487 MDLMVDCQPPPMAYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVL 545
Query: 512 FVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAE 567
KH L P P SS+ R + PD ++ K ++GS VE+ + E
Sbjct: 546 HTKDNKHVLQPPPRPAQPTSSKKRKRVSEDVPD-----CKVLKPLLSGSIPVEQFVQTLE 600
Query: 568 SEDGFTVKVQDPEKSMI 584
+KV+D K I
Sbjct: 601 KHGFSDIKVEDTAKGHI 617
>gi|221045058|dbj|BAH14206.1| unnamed protein product [Homo sapiens]
Length = 552
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIGTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 492
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|327282487|ref|XP_003225974.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Anolis
carolinensis]
Length = 637
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 244/522 (46%), Gaps = 57/522 (10%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W + +FL +M + L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WVLKDGSTFLD-KMELLDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W E LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKEVQRLLPSPLK------DAVEVATWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + I SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYNMQEVNSALSKIQLVGYSQKIELFGAVQISPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQTSLKNSDVLILTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFKQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W + N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSNLNTVIFTEPDFSYLDALAPYQPLAMKCVYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDVTSFSVS------HYSENETIHIPSL 476
+V LLK +QP V+ PE++ + + S T + Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHRTDLMIDCLPPPMSYRRAEVLTLPFK 489
Query: 477 KESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKH 518
+ ++EI ++A +K +++ + L KH
Sbjct: 490 RRYEKIEITPELADSLVPTEMK-PGISLATVTAVLHTKDNKH 530
>gi|431918247|gb|ELK17474.1| Integrator complex subunit 9, partial [Pteropus alecto]
Length = 655
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 271/594 (45%), Gaps = 85/594 (14%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTIQIGRLLMEELV--NFIERV---PKAQSASMWKNKDI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSSLALTVRNGGNVLVPCYPSGVIY 303
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLASIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D +S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPPMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR------------PFLHWGSPDPENLLAELSKMG 554
L KH L P P GG + R P L GS E + L K G
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKRANEDIPDCKVLKPLLS-GSIPVEQFVQTLEKHG 599
Query: 555 INGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
+D + ED G V +Q+ E ++I++ T +I D+ L R+
Sbjct: 600 --------FSDIKVEDTAKGHIVLLQEAE-TLIQIEEDSTHIICDNDETLRVRL 644
>gi|440895499|gb|ELR47667.1| Integrator complex subunit 9, partial [Bos grunniens mutus]
Length = 655
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR 533
L KH L P P GG + R
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKR 567
>gi|426220575|ref|XP_004004490.1| PREDICTED: integrator complex subunit 9 [Ovis aries]
Length = 658
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR 533
L KH L P P GG + R
Sbjct: 544 LHTKDNKHVLQPPPRPAQPTGGKKRKR 570
>gi|402877906|ref|XP_003902652.1| PREDICTED: integrator complex subunit 9 isoform 2 [Papio anubis]
Length = 637
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 548 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQILEKHGFSDIKVEDTAKGHI 595
>gi|395739541|ref|XP_003777277.1| PREDICTED: integrator complex subunit 9 [Pongo abelii]
Length = 634
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 574
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|289191297|ref|NP_001166033.1| integrator complex subunit 9 isoform 3 [Homo sapiens]
gi|332825766|ref|XP_003311696.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|221042238|dbj|BAH12796.1| unnamed protein product [Homo sapiens]
Length = 634
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 574
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|223555968|ref|NP_060720.2| integrator complex subunit 9 isoform 1 [Homo sapiens]
gi|114619527|ref|XP_001166975.1| PREDICTED: integrator complex subunit 9 isoform 6 [Pan troglodytes]
gi|332825768|ref|XP_003311695.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|119371246|sp|Q9NV88.2|INT9_HUMAN RecName: Full=Integrator complex subunit 9; Short=Int9; AltName:
Full=Protein related to CPSF subunits of 74 kDa;
Short=RC-74
gi|19263803|gb|AAH25267.1| Integrator complex subunit 9 [Homo sapiens]
gi|119583910|gb|EAW63506.1| integrator complex subunit 9, isoform CRA_c [Homo sapiens]
gi|190689503|gb|ACE86526.1| integrator complex subunit 9 protein [synthetic construct]
gi|190690861|gb|ACE87205.1| integrator complex subunit 9 protein [synthetic construct]
gi|410207030|gb|JAA00734.1| integrator complex subunit 9 [Pan troglodytes]
gi|410251808|gb|JAA13871.1| integrator complex subunit 9 [Pan troglodytes]
gi|410290238|gb|JAA23719.1| integrator complex subunit 9 [Pan troglodytes]
gi|410339459|gb|JAA38676.1| integrator complex subunit 9 [Pan troglodytes]
Length = 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|119583909|gb|EAW63505.1| integrator complex subunit 9, isoform CRA_b [Homo sapiens]
Length = 656
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 105 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 159
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 160 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 213
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 214 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 269
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 270 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 304
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 305 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 364
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 365 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 423
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 424 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 483
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 484 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 541
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 542 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 596
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 597 EKHGFSDIKVEDTAKGHI 614
>gi|291385827|ref|XP_002709344.1| PREDICTED: integrator complex subunit 9 [Oryctolagus cuniculus]
Length = 687
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 259/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 136 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 190
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 191 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 244
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 245 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLVLTGLTQIPT---- 300
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 301 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 335
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 336 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 395
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 396 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 454
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 455 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 514
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 515 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 572
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD + L LS GS VE+ +
Sbjct: 573 LHTKDNKHVLQPPPRPAQPTSGKKRKRVTEDVPDCKALKPLLS-----GSIPVEQFVQTL 627
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 628 EKHGFSDIKVEDTAKGHI 645
>gi|355697836|gb|EHH28384.1| Integrator complex subunit 9, partial [Macaca mulatta]
gi|355779609|gb|EHH64085.1| Integrator complex subunit 9, partial [Macaca fascicularis]
Length = 655
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 541 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 595
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 596 EKHGFSDIKVEDTAKGHI 613
>gi|297682595|ref|XP_002819002.1| PREDICTED: integrator complex subunit 9 isoform 1 [Pongo abelii]
gi|383419913|gb|AFH33170.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
gi|384948168|gb|AFI37689.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
gi|387540780|gb|AFJ71017.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
Length = 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|402877908|ref|XP_003902653.1| PREDICTED: integrator complex subunit 9 isoform 3 [Papio anubis]
Length = 552
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQIL 492
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|332247653|ref|XP_003272974.1| PREDICTED: integrator complex subunit 9 isoform 4 [Nomascus
leucogenys]
Length = 552
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 566
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 492
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|332247647|ref|XP_003272971.1| PREDICTED: integrator complex subunit 9 isoform 1 [Nomascus
leucogenys]
Length = 658
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 566
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|332247649|ref|XP_003272972.1| PREDICTED: integrator complex subunit 9 isoform 2 [Nomascus
leucogenys]
Length = 634
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 566
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 574
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|402877904|ref|XP_003902651.1| PREDICTED: integrator complex subunit 9 isoform 1 [Papio anubis]
Length = 658
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQIL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|7023178|dbj|BAA91867.1| unnamed protein product [Homo sapiens]
gi|60650140|tpg|DAA05670.1| TPA_exp: beta-lactamase fold protein family member RC-74 [Homo
sapiens]
gi|78100157|tpg|DAA05726.1| TPA_exp: integrator complex subunit 9 [Homo sapiens]
Length = 658
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 260/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSAPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|281349180|gb|EFB24764.1| hypothetical protein PANDA_007455 [Ailuropoda melanoleuca]
Length = 655
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADALVPMEIK-PGISLATVSAV 540
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR 533
L KH L P P GG + R
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKR 567
>gi|301766988|ref|XP_002918918.1| PREDICTED: integrator complex subunit 9-like [Ailuropoda
melanoleuca]
Length = 658
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADALVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEP----GGSSQTR 533
L KH L P P GG + R
Sbjct: 544 LHTKDNKHVLQPPPRPAQPTGGKKRKR 570
>gi|327282485|ref|XP_003225973.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Anolis
carolinensis]
Length = 658
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 53/487 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKEV 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + I S
Sbjct: 162 QRLLPSPLK------DAVEVATWRRCYNMQEVNSALSKIQLVGYSQKIELFGAVQISPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W + N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSNLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 485
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCLPPPMSYRRAEVLTLPFKRRYEKIEITPELADSLVPTEMK-PGISLATVTAVL 544
Query: 512 FVNHGKH 518
KH
Sbjct: 545 HTKDNKH 551
>gi|390473533|ref|XP_002756844.2| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9
[Callithrix jacchus]
Length = 658
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAES 568
L KH L P + + G P+ ++ K ++GS VE+ + E
Sbjct: 544 LHTKDNKHLLQPPPRSAQPTSGKKRKRVGDDVPD---CKVLKPLLSGSIPVEQFVQTLEK 600
Query: 569 EDGFTVKVQDPEKSMI 584
+KV+D K I
Sbjct: 601 HGFSDIKVEDTAKGHI 616
>gi|224048949|ref|XP_002188839.1| PREDICTED: integrator complex subunit 9 [Taeniopygia guttata]
Length = 658
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 223/460 (48%), Gaps = 56/460 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 103 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ R
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 485
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIA 489
T + D ++S Y E + +P + ++EI D+A
Sbjct: 486 TDLMI-DCQPPAMS-YRRAEVLTLPYKRRYEKIEIMPDLA 523
>gi|334312668|ref|XP_001382043.2| PREDICTED: integrator complex subunit 9 [Monodelphis domestica]
Length = 678
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 259/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 127 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKEV 181
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 182 QRLLPAPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 235
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 236 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 291
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 292 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 326
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L + EWLC +Q K++ +P F H +
Sbjct: 327 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFAQIFAEWLCHNKQTKVYLPEPPFPHAE 386
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 387 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 445
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 446 DFSYLDALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 505
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 506 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAV 563
Query: 511 LFVNHGKH--QLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH Q P +S+ R + PD +L K ++GS V++ +
Sbjct: 564 LHTKDNKHVLQAPPRPSQPPASKKRKRVSDDIPD-----CKLLKPLLSGSIPVDQFVQTL 618
Query: 567 ESEDGFTVKVQDPEKSMI 584
E VKV+D K I
Sbjct: 619 EKHGFSDVKVEDTAKGHI 636
>gi|270012467|gb|EFA08915.1| hypothetical protein TcasGA2_TC006621 [Tribolium castaneum]
Length = 645
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 265/576 (46%), Gaps = 59/576 (10%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ M+ LPF+T GF ++Y TE +IG+L++EEL+ Y + S QW
Sbjct: 106 LCMMALPFITEGTGFQGRVYATEPTLQIGRLLLEELV----NYID-QCPKASFAAQWKNL 160
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+ LP L + +L + V +S++Q + + E+ G L + S
Sbjct: 161 --IHKLPYPLSDSFKPKSWKQLYN----MNDVNASLSRIQMVGYNEKIDVYGALKVMPSS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII+ I Y+SGS+ + H D+ +++ +D+++ +DL+
Sbjct: 215 SGFCLGSSNWIITSDHEKIVYLSGSSTLTTHPRPMDHHSLKNADVLIMTDLTQ------- 267
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+SN D L +C +++ GG+VLIP GV
Sbjct: 268 ----------------TPISNPDS------MLGVLCVVVGLTLRGGGNVLIPCYPTGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E +++ M+ + P++ +S VA+ LAY+N + EWL +Q K++ + F H
Sbjct: 306 DLFECLSVKMQDLGVSNCPMFFVSPVADTSLAYSNILAEWLSSVKQNKVYVTEEPFPHGL 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K K+ F V+S ++QEPC+VF H SLR G + + W + N ++ E
Sbjct: 366 LVKNNKLKHFKHVYSDGFSTDFQEPCVVFCGHPSLRFGDVVRFIELWGNNPRNCIVFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ D A+ P++P+ MKV C+ + + L++ L+P ++ PE + + VS ++
Sbjct: 426 DFDYTEALAPYQPLQMKVAHCAIDTSLNFTQANKLIRDLKPNTLVVPECYTQPPVSAPNL 485
Query: 458 TSFSVSH--------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + + + Y E I++P ++ +++ I +A K +K ++++ + G
Sbjct: 486 TDYVIENNHDRTLIPYKWGEVINLPLKRKHSQIFIETGVAQKIVPVEVK-PGISLSSITG 544
Query: 510 RLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESE 569
L + H + + + WGS + + L +LS+ GI+ ES
Sbjct: 545 TLSIKDNVHSIQDLSSSVNKASKHVKYEWGSLNVTDFLQKLSQEGISEP------KVESH 598
Query: 570 DGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
V E ++I++ T V+ D+ L +++
Sbjct: 599 GNVVVIHLQEEDALIQLEDNSTHVVCTGDETLRTKL 634
>gi|344281265|ref|XP_003412400.1| PREDICTED: integrator complex subunit 9 [Loxodonta africana]
Length = 688
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 238/501 (47%), Gaps = 58/501 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 137 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFIERV---PKAQSASLWKNKDV 191
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 192 QRLLPSPLK------DAVEVSTWRRCYSMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 245
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+I ++Y+SGS+ + H D +++ SD++L + L+ + +
Sbjct: 246 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLLLTGLTQIPT---- 301
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 302 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 336
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 337 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 396
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H L W N+++ E
Sbjct: 397 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFLELWGKSSLNTVIFTEP 455
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 456 DFSYLDALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 515
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 516 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 573
Query: 511 LFVNHGKHQLLPENEPGGSSQ 531
L KH L P P S+Q
Sbjct: 574 LHTKDNKHVLQP---PPRSTQ 591
>gi|326916725|ref|XP_003204655.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Meleagris
gallopavo]
Length = 637
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 53/487 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 86 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 140
Query: 103 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 250
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 285
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 405 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 464
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 465 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAML 523
Query: 512 FVNHGKH 518
KH
Sbjct: 524 HTKDNKH 530
>gi|338722341|ref|XP_003364525.1| PREDICTED: integrator complex subunit 9 isoform 4 [Equus caballus]
Length = 637
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 216/445 (48%), Gaps = 49/445 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLRHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW 448
+V LLK +QP V+ PE++
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|338722339|ref|XP_003364524.1| PREDICTED: integrator complex subunit 9 isoform 3 [Equus caballus]
Length = 637
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 216/445 (48%), Gaps = 49/445 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLRHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW 448
+V LLK +QP V+ PE++
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|71894979|ref|NP_001026271.1| integrator complex subunit 9 [Gallus gallus]
gi|82082171|sp|Q5ZKK2.1|INT9_CHICK RecName: Full=Integrator complex subunit 9; Short=Int9
gi|53130824|emb|CAG31741.1| hypothetical protein RCJMB04_10e20 [Gallus gallus]
Length = 658
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 53/487 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASTWKNKEV 161
Query: 103 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 485
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAML 544
Query: 512 FVNHGKH 518
KH
Sbjct: 545 HTKDNKH 551
>gi|397521484|ref|XP_003830824.1| PREDICTED: integrator complex subunit 9 isoform 2 [Pan paniscus]
gi|403292471|ref|XP_003937271.1| PREDICTED: integrator complex subunit 9 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 637
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 217/445 (48%), Gaps = 49/445 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW 448
+V LLK +QP V+ PE++
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|114052212|ref|NP_001039828.1| integrator complex subunit 9 [Bos taurus]
gi|124012257|sp|Q2KJA6.1|INT9_BOVIN RecName: Full=Integrator complex subunit 9; Short=Int9
gi|86823872|gb|AAI05438.1| Integrator complex subunit 9 [Bos taurus]
Length = 658
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 55/490 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS----- 453
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPTPAQSHR 485
Query: 454 ---FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQL 520
L KH L
Sbjct: 544 LHTKDNKHVL 553
>gi|326916723|ref|XP_003204654.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Meleagris
gallopavo]
Length = 658
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 53/487 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 103 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 485
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAML 544
Query: 512 FVNHGKH 518
KH
Sbjct: 545 HTKDNKH 551
>gi|296484936|tpg|DAA27051.1| TPA: integrator complex subunit 9 [Bos taurus]
Length = 658
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 233/490 (47%), Gaps = 55/490 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQL 520
L KH L
Sbjct: 544 LHTKDNKHVL 553
>gi|444721812|gb|ELW62523.1| Integrator complex subunit 9 [Tupaia chinensis]
Length = 611
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 60 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 114
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 115 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 168
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 169 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 224
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 225 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 259
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 260 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 319
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 320 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 378
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 379 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 428
>gi|410956456|ref|XP_003984858.1| PREDICTED: integrator complex subunit 9 [Felis catus]
Length = 637
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 216/445 (48%), Gaps = 49/445 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTVQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W + LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKDIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSLHG-DFSSDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW 448
+V LLK +QP V+ PE++
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|194208296|ref|XP_001493401.2| PREDICTED: integrator complex subunit 9 isoform 1 [Equus caballus]
Length = 658
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|338722337|ref|XP_003364523.1| PREDICTED: integrator complex subunit 9 isoform 2 [Equus caballus]
Length = 658
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|449267545|gb|EMC78479.1| Integrator complex subunit 9, partial [Columba livia]
Length = 658
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 220/458 (48%), Gaps = 52/458 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFAGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 103 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----THVSF 454
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQAHR 485
Query: 455 SDV---TSFSVSHYSENETIHIPSLKESAELEIAADIA 489
+D+ Y E + +P + ++EI ++A
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELA 523
>gi|397521488|ref|XP_003830826.1| PREDICTED: integrator complex subunit 9 isoform 4 [Pan paniscus]
gi|403292473|ref|XP_003937272.1| PREDICTED: integrator complex subunit 9 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 552
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 369
>gi|189240387|ref|XP_001807249.1| PREDICTED: similar to cleavage and polyadenylation specificity
factor [Tribolium castaneum]
Length = 649
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 268/580 (46%), Gaps = 63/580 (10%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ M+ LPF+T GF ++Y TE +IG+L++EEL+ Y + S QW
Sbjct: 106 LCMMALPFITEGTGFQGRVYATEPTLQIGRLLLEELV----NYID-QCPKASFAAQWKNL 160
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+ LP L + +L + V +S++Q + + E+ G L + S
Sbjct: 161 --IHKLPYPLSDSFKPKSWKQLYN----MNDVNASLSRIQMVGYNEKIDVYGALKVMPSS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII+ I Y+SGS+ + H D+ +++ +D+++ +DL+
Sbjct: 215 SGFCLGSSNWIITSDHEKIVYLSGSSTLTTHPRPMDHHSLKNADVLIMTDLTQ------- 267
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+SN D L +C +++ GG+VLIP GV
Sbjct: 268 ----------------TPISNPDS------MLGVLCVVVGLTLRGGGNVLIPCYPTGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E +++ M+ + P++ +S VA+ LAY+N + EWL +Q K++ + F H
Sbjct: 306 DLFECLSVKMQDLGVSNCPMFFVSPVADTSLAYSNILAEWLSSVKQNKVYVTEEPFPHGL 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K K+ F V+S ++QEPC+VF H SLR G + + W + N ++ E
Sbjct: 366 LVKNNKLKHFKHVYSDGFSTDFQEPCVVFCGHPSLRFGDVVRFIELWGNNPRNCIVFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ D A+ P++P+ MKV C+ + + L++ L+P ++ PE + + VS ++
Sbjct: 426 DFDYTEALAPYQPLQMKVAHCAIDTSLNFTQANKLIRDLKPNTLVVPECYTQPPVSAPNL 485
Query: 458 TSFSVSH--------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + + + Y E I++P ++ +++ I +A K +K ++++ + G
Sbjct: 486 TDYVIENNHDRTLIPYKWGEVINLPLKRKHSQIFIETGVAQKIVPVEVK-PGISLSSITG 544
Query: 510 RLFVNHGKHQLLPENEPGGSSQTRPFLH----WGSPDPENLLAELSKMGINGSVERCMTD 565
L + H + + SS + H WGS + + L +LS+ GI+
Sbjct: 545 TLSIKDNVHSIQVFFKDLSSSVNKASKHVKYEWGSLNVTDFLQKLSQEGISEP------K 598
Query: 566 AESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
ES V E ++I++ T V+ D+ L +++
Sbjct: 599 VESHGNVVVIHLVKEDALIQLEDNSTHVVCTGDETLRTKL 638
>gi|351701446|gb|EHB04365.1| Integrator complex subunit 9, partial [Heterocephalus glaber]
Length = 655
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G++ + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGVVQVTPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +++ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTIRNGGNVLVPCYPSGVIY 303
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 472
>gi|397521486|ref|XP_003830825.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pan paniscus]
gi|403292469|ref|XP_003937270.1| PREDICTED: integrator complex subunit 9 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 634
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 451
>gi|397521482|ref|XP_003830823.1| PREDICTED: integrator complex subunit 9 isoform 1 [Pan paniscus]
gi|403292467|ref|XP_003937269.1| PREDICTED: integrator complex subunit 9 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 658
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|73993860|ref|XP_543216.2| PREDICTED: integrator complex subunit 9 [Canis lupus familiaris]
Length = 658
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|119583908|gb|EAW63504.1| integrator complex subunit 9, isoform CRA_a [Homo sapiens]
Length = 525
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|354471564|ref|XP_003498011.1| PREDICTED: integrator complex subunit 9 [Cricetulus griseus]
Length = 658
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|148227810|ref|NP_001086545.1| integrator complex subunit 9 [Xenopus laevis]
gi|82182872|sp|Q6DFF4.1|INT9_XENLA RecName: Full=Integrator complex subunit 9; Short=Int9
gi|49904072|gb|AAH76784.1| MGC83696 protein [Xenopus laevis]
Length = 658
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 224/459 (48%), Gaps = 54/459 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITERTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSATVWKHKDV 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP+ L+ D E+ C + V +SK+Q + + ++ G++ + S
Sbjct: 162 QRLLPAPLK------DAVEVFTWKKCYSMQEVNAALSKIQLVGYSQKIELFGVVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+I ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS ++++GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTIRSGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQNKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P +H ++++PC+VF+ H +LR G +H + W N+++ E
Sbjct: 367 LIQSNKLKHYPNIHG-DFSNDFKQPCVVFTGHPTLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVTKLLKEVQPLHVVCPEQYTQPPATQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIA 489
S D +S Y E + +P + ++EI ++A
Sbjct: 486 SDLMIDCQPPPMS-YHRAEVLTLPFKRRYEKIEIMPELA 523
>gi|291235488|ref|XP_002737676.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 624
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 255/563 (45%), Gaps = 81/563 (14%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF +Y TE + G+ +MEEL+ EY + + + +W +
Sbjct: 108 MLALPFITEYTGFHGIVYATEPTVQSGRQLMEELV----EYIERVPKLQPAT-KWKEPNI 162
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
L+ LPS LR+ + C + +SKV+ + E+ G L + SSG
Sbjct: 163 LKTLPSPLRESLHVPSWRK----CYNKHDINAAMSKVKLAGYSEKLNLYGALSMVPLSSG 218
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
IG+CNW+I + YISGS+ + H + ++ SD+++ L+ L+ T
Sbjct: 219 YCIGSCNWVIQSDFEKVTYISGSSLLTTHPLPMVTGPMKNSDVLI---LTGLNQT----- 270
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
+F+ DN L CS ++K GG+VL+P GV L
Sbjct: 271 PTFNPDN---------------------MLGEFCSNLAVTIKNGGNVLVPCCPSGVIYDL 309
Query: 283 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
E ++ FM+ + L +IP+Y IS VA+ LAY+ EWLC +Q K++ +P F H +L+
Sbjct: 310 FECLSAFMDSAGLTQIPLYFISHVADSSLAYSQIFAEWLCPAKQSKVYLPEPPFPHGELV 369
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEV 400
K ++ FP++H + ++ PC+VF+ H SLR G +H + W N+++ E
Sbjct: 370 KGGRLKHFPSIHG-EFTNQFKTPCVVFTGHPSLRFGDAVHFMELWGKSSMNTVIFTEPSF 428
Query: 401 DAELAVLPFKPISMKVLQC------SFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF 454
+ A+ PF+P+SMK C +F KL K L ++ P L P H
Sbjct: 429 NYLDALAPFQPLSMKSCYCPIDPTMNFSQANKLIKELKALHVIIPDAYLSPPPLLPHRDD 488
Query: 455 SDV-TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
V T + + + + +P + ++EI ++ K + K++K R + +
Sbjct: 489 LIVETDPPPTPFKRADVLTLPVRRRQEKIEITSEPLPKAPVVVGKKRK----RGEEEIIN 544
Query: 514 NHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESED--- 570
H KH + +G+ D E+ + L+K G+ TD + ED
Sbjct: 545 KHPKHYV-----------------YGNLDIEDFVRNLTKHGV--------TDMKVEDTPG 579
Query: 571 GFTVKVQDPEKSMIEVRAAVTVI 593
G V + E ++I+V T I
Sbjct: 580 GHIVHLPS-EDTIIQVEEGSTHI 601
>gi|344254234|gb|EGW10338.1| Integrator complex subunit 9 [Cricetulus griseus]
Length = 551
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 202/409 (49%), Gaps = 45/409 (11%)
Query: 44 LGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEEL 103
+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDIQ 55
Query: 104 ELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
LLPS L+ D E+ C + V +SK+Q + + ++ G + + SS
Sbjct: 56 RLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSS 109
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 GYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT----- 164
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+N D V E CS +V+ GG+VL+P GV
Sbjct: 165 ------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIYD 200
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +L
Sbjct: 201 LLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAEL 260
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENE 399
I+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E +
Sbjct: 261 IQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPD 319
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 320 FSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 368
>gi|62859992|ref|NP_001016601.1| integrator complex subunit 9 [Xenopus (Silurana) tropicalis]
Length = 658
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 267/591 (45%), Gaps = 79/591 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITERTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSATLWKHKDV 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPVPLK------DAVEVFTWRKCYTMQEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+I ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS ++++GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTIRSGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQNKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H +LR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPTLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----THVSF 454
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVTKLLKEVQPLHVVCPEQYTQPPATQAHR 485
Query: 455 SDV---TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
SD+ Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 SDLMIDCQPPPMSYRRAEVLALPFKRRYEKIEIMPELAESLVPFEIK-PGVSLATVSAVL 544
Query: 512 FVNHGKHQLLP-------------ENEPGGSSQTRPF--LHWGSPDPENLLAELSKMGIN 556
KH L P + + S +T+PF L GS + + L K G
Sbjct: 545 HTKDNKHVLQPPPKVAAPPASKKRKRQAEESPETQPFKPLLSGSIPVDQFVQTLEKHG-- 602
Query: 557 GSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVTVISAADKNLASRI 604
+D + ED G V +Q+ E + + +I D+ L R+
Sbjct: 603 ------FSDVKIEDTAKGHIVHLQEAETLIQFEEDSTHIICEHDERLRVRL 647
>gi|242025660|ref|XP_002433242.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518783|gb|EEB20504.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 664
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 150/604 (24%), Positives = 272/604 (45%), Gaps = 88/604 (14%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK- 99
+ ML LPF+T GF +Y TE +IG+L +EEL+ E+ E+S K
Sbjct: 106 LCMLALPFVTEDTGFKGVVYCTEPTMQIGRLFLEELV----EW-----IEQSPKSNVAKH 156
Query: 100 WEE-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 158
W+E L LLP L + + + V +S++Q + + E+ G L
Sbjct: 157 WKEVLHLLPPPLNDAFKPRNWRHIYN----MQQVNSALSRIQVVGYDEKLDIYGALKAIP 212
Query: 159 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 218
SSG +G+ NWII IAY+SGS + H A++ ++++ + L+ +
Sbjct: 213 VSSGYCLGSANWIIQTDYEKIAYVSGSTTLTTHPKPMHQNALRNVNVLIITALTQTPT-- 270
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
SN D + E+ C +V+ GG VL+P GV
Sbjct: 271 ---------------------SNPDSMLGEL------CINTAMTVRNGGCVLLPCYPSGV 303
Query: 279 FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
L E ++ +++ + L +IP++ IS VA+ LAY+N + EWL + +Q K++ + F H
Sbjct: 304 VYDLFECLSSYLDATGLTQIPMFFISPVADTSLAYSNILAEWLSQAKQNKVYLPEEPFPH 363
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVL 396
L+K ++ F +++ +++PC+VF H SLR G ++H + W S +S++
Sbjct: 364 AFLVKNSRLKHFKNIYAENFSAEFRQPCVVFCGHPSLRFGDSVHFMELWGSNPLHSVIFT 423
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-------- 448
E + A+ PF+P+ MKV+ C + + L++ L+P ++ PE +
Sbjct: 424 EPDFPYLDAISPFQPLQMKVVHCPIDTSLNFTQATKLIRELKPGTLVIPESYTKNPLGSS 483
Query: 449 -RTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRL 507
RT + D E I +P ++ + E++AD+AS+ + +++T +
Sbjct: 484 QRTDL-LIDAQERPTLTMKRGEVIKLPVKRKKVKAEMSADLASEL-IPCETRPGVSLTSV 541
Query: 508 KGRLFVNHGKHQL--------LPENEPGGSS------------QTRPFLHWGSPDPENLL 547
G+L +N K+++ L E + + +P WG D + +
Sbjct: 542 TGKLILNDNKYKIESLESNQDLKRKESSSGTCEDSDTCGDVLPKRKPTYEWGWLDIDQFV 601
Query: 548 AELSKMGINGSVERCMTDAESE---DGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRI 604
+LS+ GIN DA+ E G+ + +Q+ + + + +I D+ L ++
Sbjct: 602 QKLSQEGIN--------DAKVEHGNPGYIIHLQESDTLITVEDSQTHIICEGDRQLRLKL 653
Query: 605 VKAM 608
A+
Sbjct: 654 RDAL 657
>gi|392333345|ref|XP_003752866.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Rattus
norvegicus]
gi|392353606|ref|XP_003751552.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Rattus
norvegicus]
Length = 637
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 274/593 (46%), Gaps = 68/593 (11%)
Query: 8 WTFRHSQSFLHCQMIFIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAAR 67
W+ + +FL + I L ++++ M+ LP++T GF+ +Y TE +
Sbjct: 55 WSLKDGNAFLD-KTELIDLSTVDVILISNYHC---MMALPYITEHTGFTGTVYATEPTMQ 110
Query: 68 IGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGG--G 125
IG+L+MEEL+ N R + S W E LLPS L+ D E+
Sbjct: 111 IGRLLMEELV--NFIERV---PKAQSASLWKNKEIQRLLPSPLK------DAVEVSTWRR 159
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLILTGLTQIPT-----------------------ANPDGM 256
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L IP Y IS
Sbjct: 257 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISP 310
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ + ++H ++++P
Sbjct: 311 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYRSIHG-DFSHDFRQP 369
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C++F+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 370 CVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 429
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 430 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 488
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQL--LPENEPGGSSQTR 533
+ ++EI ++A +K +++ + L KH L P+ SS+ R
Sbjct: 489 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHVLQPPPKPTQPTSSKKR 547
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD +++ K ++GS VE+ + E +KV+D K I
Sbjct: 548 KRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 595
>gi|149030292|gb|EDL85348.1| similar to hypothetical protein FLJ10871 (predicted) [Rattus
norvegicus]
Length = 595
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 44 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKEI 98
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 99 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 152
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 153 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 208
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 209 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 243
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 244 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 303
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 304 LIQTNKLKHYRSIHG-DFSHDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 362
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 363 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 422
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 423 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 480
Query: 511 LFVNHGKHQL--LPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P+ SS+ R + PD +++ K ++GS VE+ +
Sbjct: 481 LHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTL 535
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 536 EKHGFSDIKVEDTAKGHI 553
>gi|62661637|ref|XP_214216.3| PREDICTED: integrator complex subunit 9-like isoform 2 [Rattus
norvegicus]
gi|109502600|ref|XP_001066109.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Rattus
norvegicus]
Length = 658
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKEI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSHDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 452
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 453 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 511 LFVNHGKHQL--LPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 566
L KH L P+ SS+ R + PD +++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTL 598
Query: 567 ESEDGFTVKVQDPEKSMI 584
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|328701441|ref|XP_001952248.2| PREDICTED: integrator complex subunit 9-like isoform 1
[Acyrthosiphon pisum]
gi|328701443|ref|XP_003241601.1| PREDICTED: integrator complex subunit 9-like isoform 2
[Acyrthosiphon pisum]
Length = 657
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 199/412 (48%), Gaps = 46/412 (11%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK- 99
M ML LPF+T GF +Y+TE IG+L +EEL+ E+S P K
Sbjct: 108 MTMLALPFITENTGFKGVVYMTEPTLHIGKLFLEELVDF---------VEQSPKPNVAKY 158
Query: 100 WEE-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 158
W+E L LLP L +L +A V +++VQ + + ++ G L + A
Sbjct: 159 WKEILHLLPPPLCNSFKPHTWKQLYS----LAQVNSSLTRVQMISYDQKIEITGALTVTA 214
Query: 159 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 218
SSG +G+ NW+I + Y+S ++ + H D ++ +DL+L S L+ +
Sbjct: 215 VSSGYCLGSSNWVIYLESKKLVYVSNTSTLTTHPRPMDQVNLKNADLMLLSSLTQAPA-- 272
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
+N D + E+ C +++ GSVLIP GV
Sbjct: 273 ---------------------ANPDSMLGEL------CLSVAVTLRNNGSVLIPCYPSGV 305
Query: 279 FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
L E ++ ++ ++L +IP+Y IS VA L Y+N + EWL + +Q K++ + F H
Sbjct: 306 VYDLFECLSSHLDSTALGQIPMYFISPVAHSSLEYSNILAEWLSQSKQNKVYFPEEPFPH 365
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVL 396
+L+K ++ F V++ L + ++PC+VF H SLR G +H + W + N+++
Sbjct: 366 AQLVKSGRLKHFKHVYTDDLWNDLRQPCVVFCGHPSLRFGDVVHFVEYWGTNPQNTIIFT 425
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
E E A+ PF+P+SMK + C + + ++K L+P +++ PE +
Sbjct: 426 EPEFPYLEALAPFQPLSMKAMHCPIDTSMNFTQANKMIKDLKPAVLILPERY 477
>gi|195019859|ref|XP_001985070.1| GH14706 [Drosophila grimshawi]
gi|193898552|gb|EDV97418.1| GH14706 [Drosophila grimshawi]
Length = 657
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 254/549 (46%), Gaps = 67/549 (12%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
++L LLPS L + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHLLPSPLCDAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKILAREVAT-GVSLSTLTGVLQV 544
Query: 514 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDPENLLA----ELSKMGINGSVERCMT 564
H + P ++EPG SS + +P E++L E + ++ ++R
Sbjct: 545 KDKVHCIQPCTESVKDEPGTSSMSS-----AAPSKEDVLKNVKYEYGTIDVDALMKRL-- 597
Query: 565 DAESEDGFT 573
++DGF+
Sbjct: 598 ---AQDGFS 603
>gi|357623215|gb|EHJ74459.1| hypothetical protein KGM_11568 [Danaus plexippus]
Length = 635
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 244/528 (46%), Gaps = 68/528 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LPF+T GF ++Y TE +IG+ +EEL ++ +W+E
Sbjct: 108 MMALPFITEDTGFKGQVYATEPTLQIGRFYLEEL-------SEWVSGSGGGAGAAKRWKE 160
Query: 103 L-ELLP----SALRKIA---LGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
L LLP SALR A L G+ + +S+V+ + + E G L
Sbjct: 161 LVHLLPPPLASALRPRAWRRLFSPGA-----------LARALSRVRVVGYDERVDIYGAL 209
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
A SSG +G+ NW++ A +AY+SGS+ + H + A++G+DL++ + L+
Sbjct: 210 DATAVSSGFCLGSANWVLRSAHEKVAYVSGSSTLTTHPRPINQAALRGADLLVLAALTQT 269
Query: 215 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 274
+ +N + ++ L C A +++AGGSVL P+
Sbjct: 270 PA-------------HNPDHMLGDL----------------CVHATVTLRAGGSVLCPVY 300
Query: 275 RVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
GV LLE ++ +E + L +P+Y++S VA+ LAY+N + EW+ +Q +++ +
Sbjct: 301 PSGVLYDLLECLSAHLEGAGLAHVPLYVVSPVADSSLAYSNILAEWVSVGKQARVYLPEE 360
Query: 334 LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNS 392
F H L++ ++ ++H ++++PC+VF H SLR G +HL+ W+ + ++
Sbjct: 361 PFPHAALVRAGRLKHARSLHDDAFSADFRQPCVVFCGHPSLRFGAAVHLVELWANNPAHA 420
Query: 393 LLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHV 452
++ E + A+ PF+P+SMK C + + L++ L+P+ + PE++
Sbjct: 421 IIFTEPDFPHAEALAPFQPLSMKAFHCPIDTSLNYSQANKLVRELRPRELALPEQYAASG 480
Query: 453 SFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKGRL 511
+ + S + HI + ++ + + R L + L L L
Sbjct: 481 GTAAGGGAAASGGAGGTRPHIGA-------DVPTVVVRRGAARSLGLRAGLRAAPLTAAL 533
Query: 512 FVNHGKHQLLPE---NEPGGSSQTRPFLHWGSPDPENLLAELSKMGIN 556
V + +L+ PG + P LHW + D E L+ L++ G++
Sbjct: 534 RVRDARLELVAPAACGTPGTEAAPAPVLHWSALDVEALVRALAREGVS 581
>gi|157126894|ref|XP_001660997.1| cleavage and polyadenylation specificity factor [Aedes aegypti]
gi|108873097|gb|EAT37322.1| AAEL010663-PA [Aedes aegypti]
Length = 665
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 262/579 (45%), Gaps = 79/579 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
M+ LPF+T GF+ +Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 108 NMMALPFITEGTGFTGTVYATEPTLQIGRFFLEELV----EYIEASPKENTA----RVWK 159
Query: 102 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+++ LLP L + ++ L + V +++VQ + ++ G L + S
Sbjct: 160 DIQHLLPPPLNDVFKPKNWRHLFS----MDAVNKSLARVQMTGYDQKLDIFGALQVTPVS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII+ + I+YISGS+ + H + A++ SD+++ + L+
Sbjct: 216 SGFCLGSSNWIINSGQEKISYISGSSTLTTHPRPINQSALKYSDVVIMTGLT-------- 267
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
Q+ + + EL C + +++ GGSVLIP GV
Sbjct: 268 -QAPHVNPDGMLGEL--------------------CMNVVMTLRNGGSVLIPCYPSGVVY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 307 DLFECLSSSLDNQGFAQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHGS 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 398
L+K K+ F ++S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 367 LVKNAKLKHFKHIYSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPQHTIIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 427 DFPYLQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPPIAPHK 486
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + + + E I +P ++ + + + IA + Q + I+ + G
Sbjct: 487 TDLVIDQTPDKMIIKFKRGEVIKLPLKRKRSRIYLDPQIARSLVPHEV-QPGVTISSVTG 545
Query: 510 RLFVNHGKHQL---------LPENEPGGSSQTRPFLH---------WGSPDPENLLAELS 551
L V H L L E + +++ +P H WGS D L +L+
Sbjct: 546 VLHVKDNIHDLHPLEPTPEELEEQKTAKTAKLQPPSHNRYRNVKYEWGSLDVNLFLKKLA 605
Query: 552 KMGIN------GSVERCMTDAESEDGFTVKVQDPEKSMI 584
+ GI G V+ SED +KV D S++
Sbjct: 606 QDGITDIKVEQGGVDELTLHLASEDTM-IKVSDKTTSIV 643
>gi|148704091|gb|EDL36038.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_c [Mus
musculus]
Length = 624
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 73 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIER---VPKAQSASLWKNKDI 127
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 128 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 181
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 182 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 237
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 238 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 272
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 273 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 332
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 333 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 391
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 392 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 441
>gi|359279877|ref|NP_001240660.1| integrator complex subunit 9 isoform 2 [Mus musculus]
Length = 634
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 247
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 401
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 451
>gi|148704090|gb|EDL36037.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_b [Mus
musculus]
Length = 695
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 144 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 198
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 199 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 252
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 253 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 308
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 309 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 343
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 344 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 403
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 404 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 462
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 463 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 512
>gi|31981980|ref|NP_700463.2| integrator complex subunit 9 isoform 1 [Mus musculus]
gi|26346532|dbj|BAC36917.1| unnamed protein product [Mus musculus]
Length = 687
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 136 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 190
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 191 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 244
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 245 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 300
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 301 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 335
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 336 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 395
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 396 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 454
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 455 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 504
>gi|81878401|sp|Q8K114.1|INT9_MOUSE RecName: Full=Integrator complex subunit 9; Short=Int9
gi|20809846|gb|AAH28953.1| Ints9 protein [Mus musculus]
gi|33585775|gb|AAH55700.1| Ints9 protein [Mus musculus]
gi|74205768|dbj|BAE23199.1| unnamed protein product [Mus musculus]
gi|74213888|dbj|BAE29371.1| unnamed protein product [Mus musculus]
Length = 658
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|148704089|gb|EDL36036.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_a [Mus
musculus]
Length = 591
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 122 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 176
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 177 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 230
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 231 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 286
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 287 -------------------ANPDGMVGE------FCSNLALTVRNGGNVLVPCYPSGVIY 321
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 322 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 381
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 382 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 440
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 441 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 490
>gi|26332947|dbj|BAC30191.1| unnamed protein product [Mus musculus]
Length = 576
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGE------FCSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|194751237|ref|XP_001957933.1| GF10658 [Drosophila ananassae]
gi|190625215|gb|EDV40739.1| GF10658 [Drosophila ananassae]
Length = 655
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 245/538 (45%), Gaps = 62/538 (11%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S S++
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSASNL 485
Query: 458 ----TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
+ + E I +P ++ + I +++A K R + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPREV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP--------ENEPGGSSQTRPFL------HWGSPDPENLLAELSKMGING 557
H + P N G++ T+ + +GS D E L+ L++ G +
Sbjct: 545 KDKVHCIQPCADSTQDDSNSTTGTAPTKEDVMKNIKYEYGSIDVEALMKRLTQDGFSN 602
>gi|195126435|ref|XP_002007676.1| GI12252 [Drosophila mojavensis]
gi|193919285|gb|EDW18152.1| GI12252 [Drosophila mojavensis]
Length = 659
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 255/549 (46%), Gaps = 65/549 (11%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
++L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ P+ + + H +
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPDAYTKPHPTAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKITAREV-AAGVSLSTLTGVLQV 544
Query: 514 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDPENLLA----ELSKMGINGSVERCMT 564
H + P ++EPG S L+ +P E++L E + ++ ++R
Sbjct: 545 KDKVHCIQPCADSIKDEPGTSGSG---LNAVAPSKEDVLKNIKYEYGTIDVDALMKRL-- 599
Query: 565 DAESEDGFT 573
++DGF+
Sbjct: 600 ---AQDGFS 605
>gi|195442762|ref|XP_002069115.1| GK23916 [Drosophila willistoni]
gi|194165200|gb|EDW80101.1| GK23916 [Drosophila willistoni]
Length = 659
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 138/551 (25%), Positives = 253/551 (45%), Gaps = 69/551 (12%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
++L +LPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHVLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K R + + ++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPREVTS-GVTLSTLTGVLQV 544
Query: 514 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDP------ENLLAELSKMGINGSVERC 562
H + P +++P GSS + +P P +N+ E + ++ ++R
Sbjct: 545 KDKVHCIQPCADFVKDDPTGSSSS-----GTAPAPSKEEVLKNVKYEYGTIDVDVLMKRL 599
Query: 563 MTDAESEDGFT 573
++DGFT
Sbjct: 600 -----AQDGFT 605
>gi|170038752|ref|XP_001847212.1| integrator complex subunit 9 [Culex quinquefasciatus]
gi|167882458|gb|EDS45841.1| integrator complex subunit 9 [Culex quinquefasciatus]
Length = 668
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 248/547 (45%), Gaps = 74/547 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
M+ LPF+T GFS +Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 107 NMMALPFITEGTGFSGTVYATEPTLQIGRFFLEELV----EYIEASPKENTA----RMWK 158
Query: 102 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+++ LLP L + ++ L + V +++VQ + ++ G L + S
Sbjct: 159 DIQHLLPQPLNDVFKPKNWRHLFS----LDAVNKSLARVQMTGYDQKLDIFGALQVTPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII + I+YISGS+ + H + A++ SD+I+ + L+
Sbjct: 215 SGFCLGSSNWIIVSGQEKISYISGSSTLTTHPRPINQAALKYSDVIIMAGLT-------- 266
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
Q+ + + EL C + +++ GGSVLIP GV
Sbjct: 267 -QAPHVNPDGMLGEL--------------------CMNVVMTLRNGGSVLIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLSSSLDNQGFSQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHAN 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 398
L+K K+ F ++S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 366 LVKNAKLKHFKHIYSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPQHTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 426 DFPYLQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPPIAPHK 485
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
+ + + + E I +P ++ + + + +A + Q + I+ L G
Sbjct: 486 LDLVIDQLPDKMIIKFKRGEVIKLPLKRKRSRIYLDPQMARSLVPHEI-QPGVTISTLTG 544
Query: 510 RLFVN---HGKHQLLPENE----------------PGGSSQTRPFLH-WGSPDPENLLAE 549
L V H H L P E P G ++ R + WG+ D L +
Sbjct: 545 VLHVKDNIHDLHPLEPTPEELAEEQQKLSKKPHLQPPGQNRLRHIKYEWGTLDVNLFLKK 604
Query: 550 LSKMGIN 556
L++ GI
Sbjct: 605 LAQDGIT 611
>gi|195378833|ref|XP_002048186.1| GJ11484 [Drosophila virilis]
gi|194155344|gb|EDW70528.1| GJ11484 [Drosophila virilis]
Length = 658
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 234/502 (46%), Gaps = 53/502 (10%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLNEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H +
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPAAANL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKIMAREV-VAGVSLSTLTGVLQV 544
Query: 514 NHGKHQLLP-----ENEPGGSS 530
H + P ++EP SS
Sbjct: 545 KDKVHCIQPCADSIKDEPSTSS 566
>gi|340719906|ref|XP_003398385.1| PREDICTED: integrator complex subunit 9-like [Bombus terrestris]
Length = 661
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/591 (24%), Positives = 272/591 (46%), Gaps = 78/591 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 101
ML LPF+T GF IY TE +IG+ MEEL+ +F E++ K W+
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV-------EF--IEQTPKATLAKHWK 159
Query: 102 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E L +LPS L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPSPLADALKPKSWKHIYS----ISAVNTALSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 486
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 510 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 554
L V + + E+ P G SS P +G+ DP+ LL +L++ G
Sbjct: 546 ELEVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERRHEYGNLDPQELLQKLNQEG 605
Query: 555 INGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
I G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 606 IQGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|194873287|ref|XP_001973177.1| GG13497 [Drosophila erecta]
gi|190654960|gb|EDV52203.1| GG13497 [Drosophila erecta]
Length = 654
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 226/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYIPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VFS H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFSGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|350408420|ref|XP_003488398.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Bombus
impatiens]
Length = 661
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 142/591 (24%), Positives = 271/591 (45%), Gaps = 78/591 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 101
ML LPF+T GF IY TE +IG+ MEEL+ +F E++ K W+
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV-------EF--IEQTPKATLAKHWK 159
Query: 102 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E L +LP L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPPPLADALKPKSWKHIYS----ISAVNTSLSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 486
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 510 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 554
L V + + E+ P G SS P +G+ DP+ LL +L++ G
Sbjct: 546 ELEVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEG 605
Query: 555 INGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
I G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 606 IQGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|116267933|ref|NP_001070738.1| integrator complex subunit 9 [Danio rerio]
gi|115528209|gb|AAI24794.1| Zgc:154012 [Danio rerio]
Length = 658
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 201/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ + + A W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELVAFMERVPKAHAAS-----CWKNKEI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP L+ D E+ C + V +SKVQ + + ++ G + + S
Sbjct: 162 QRLLPGPLK------DAVEVWSWSKCYSLQEVNSALSKVQLVGYSQKVELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H + +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMEQSSLKNSDVLILTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E CS +V+AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGEF------CSNLAMTVRAGGNVLVPCYSSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + FM+ ++L P Y IS VA L ++ EWLC+ +Q K++ +P F H +
Sbjct: 307 DLLECLYQFMDSANLGTTPFYFISPVANSSLEFSQIFAEWLCQNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE +
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKDIQPLHVVCPEPY 475
>gi|332025996|gb|EGI66149.1| Integrator complex subunit 9 [Acromyrmex echinatior]
Length = 638
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/589 (23%), Positives = 271/589 (46%), Gaps = 74/589 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF IY TE +IG+ MEEL+ E+ + + + W +
Sbjct: 86 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EFIE-RTPKATMAKHWK--DM 138
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
L LPS L ++ + + + V +S +Q + + ++ G L + SSG
Sbjct: 139 LHTLPSPLAEVVKPKTWKHIYS----MTAVNSALSNIQMVGYDQKLDIYGALTVTPISSG 194
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+G+ NW+IS +A++SGS+ + H D ++ ++L++ + L+ +
Sbjct: 195 FCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMDQVTLKHANLLILTGLTQTPT------ 248
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
+N D + E+ C +++AGG VLIP GV L
Sbjct: 249 -----------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVYDL 285
Query: 283 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L+
Sbjct: 286 FECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFLV 345
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEV 400
K ++ + + ++ ++++PC+VF H SLR G +H ++ W G+ ++++ E +
Sbjct: 346 KNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGGNPLHTVIFTEPDF 405
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 451
A+ PF+P+SMK + C + + L++ L+P+ ++ PE + RT
Sbjct: 406 PYLEALAPFQPLSMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPGMAPHRTD 465
Query: 452 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
+ + + + E I +P ++ + I ++AS ++ L++ + G L
Sbjct: 466 LVIESIGEKPLITFKRGEVIKLPLKRKKGRVFIEPELASNIVPSEVR-PGLSLASVTGEL 524
Query: 512 FVNHGKHQLLP-ENEPGGSSQTR-----PFL---------HWGSPDPENLLAELSKMGIN 556
V + + E++ G + P + +G+ DP+ LL +L++ G +
Sbjct: 525 DVKDNVYTIKNIEDKLSGKRKMSLGSPAPIMEEVLKERKHEYGNLDPQELLQKLNQEGFH 584
Query: 557 GSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 585 GAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRKRL 627
>gi|410916073|ref|XP_003971511.1| PREDICTED: integrator complex subunit 9-like [Takifugu rubripes]
Length = 657
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATCWKNKEI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+LP +L+ D ++ C + V +S+VQ + + ++ G + + S
Sbjct: 162 QRMLPGSLK------DAVDVWTWKRCYSMQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGE------FCSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + F+E +SL P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIESASLGTTPFYFISPVANSSLEFSQIFAEWLCNNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQY 475
>gi|312381856|gb|EFR27500.1| hypothetical protein AND_05771 [Anopheles darlingi]
Length = 966
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/588 (24%), Positives = 261/588 (44%), Gaps = 86/588 (14%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
ML LP++T GF +Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 409 NMLALPYITEGTGFCGTVYATEPTLQIGRFFLEELV----EYIEASPKESTAK----MWK 460
Query: 102 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
ELE LP+ L ++ ++ L + V +++VQ + ++ G L + S
Sbjct: 461 ELEHQLPAPLNEVFKPKNWRHLFS----MDAVNKSLARVQMTGYDQKLDIYGALQVTPIS 516
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW I + IAYISGS+ + H + A++ SD+++ + L+
Sbjct: 517 SGFCLGSSNWTIMSGQEKIAYISGSSTLTTHPRPINQAALKYSDVVIMTGLTQAPHV--- 573
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
N D + E+ C + +++ GGSVLIP GV
Sbjct: 574 --------------------NPDAMLGEL------CMNVMMTLRNGGSVLIPCYPSGVVY 607
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E +++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 608 DLFECLSVSLDNQGFTQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHAS 667
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 398
L+K K+ F + S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 668 LVKNSKLKHFKHIDSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPLHTIIFTEP 727
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 728 DFPYLQALAPYQPLAIKTVFCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPAIAPQK 787
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
+ + + E I +P ++ + + +A + +K + ++ + G
Sbjct: 788 LDLVIDQPPEKMIIKFKRGEVIKLPLKRKRGRVYLNPKMAKGIIPQEVK-PGVTVSTVTG 846
Query: 510 RLFVNHGKHQLLP---------ENEPGGSSQTRPFLH---------WGSPDPENLLAELS 551
L V H LLP E+ G S P H WG+ D LL +L+
Sbjct: 847 VLQVKDNIHDLLPLDAVKDEMEESSSKGKSTGPPQPHTQLRKIRYEWGTLDINLLLKKLA 906
Query: 552 KMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKN 599
+ G +D + E G P++ + + + T+I ++K
Sbjct: 907 QDG--------FSDIKVEQG------GPDEVTLVLPSEDTIIKVSEKT 940
>gi|443696476|gb|ELT97170.1| hypothetical protein CAPTEDRAFT_153905 [Capitella teleta]
Length = 656
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 266/593 (44%), Gaps = 64/593 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE- 101
M+ LPFLT F +Y TE +G+L MEEL+ +Y Q +++ + KW+
Sbjct: 108 MMALPFLTEYTNFRGVVYATEPTLHLGRLYMEELV----DYIQQCPSQKRAS----KWKR 159
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
+L LP LR+ + ++ + ++K+ + F E G L SS
Sbjct: 160 QLNYLPPPLREAIRPSEWRQIYSK----HDIDSSLAKICCVGFNEIKDIFGALKATPVSS 215
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G IG+CNWI++ I+Y+SG++ + H + ++ SD+++ S L+ +
Sbjct: 216 GYAIGSCNWILTSHHHKISYLSGTSTLTTHPRPMEKSPLKDSDILIMSSLTQI------- 268
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++N D + E C A ++K GG+VL+P G+
Sbjct: 269 ----------------PMANPDVKIGEF------CVNAATTLKNGGNVLVPCYPSGITYD 306
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
L E ++ ++ L +P+Y IS VA LAY+N EWL +Q K++ +P F H +L
Sbjct: 307 LFECLSSHLDTIGLGGVPLYFISPVAASSLAYSNIYAEWLSSGKQSKVYLPEPPFPHAEL 366
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENE 399
I+ ++ +P +H + PCIVF+ H SLR G +H L W N+++ E +
Sbjct: 367 IRSNRLKHYPGLHE-GFNKEIRSPCIVFTGHPSLRFGNVVHFLEIWGKSSSNTIIFTEPD 425
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT-HVSFSDVT 458
A+ P +P+ MKV C + + L++ L P+ ++ P+++ V T
Sbjct: 426 FGYLEALAPHQPLHMKVSYCPIDTSLSFSQANKLIRELHPQHIVTPDQYTAPPVMMPHCT 485
Query: 459 SFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF 512
+ + + E + +P +E +L++ +A + ++ L + L G L
Sbjct: 486 DLVIDPEYHPLTFKKAEVLTLPIKREFEQLDLDPQLAESLRPTEVR-PGLAVAMLSGSLV 544
Query: 513 VNHGKHQLLPENEPGG-----SSQTRPF-LHWGSPDPENLLAELSKMGINGSV-ERCMTD 565
+L P P S +T+P L P L L + S+ ++ + D
Sbjct: 545 SRDNHFKLTPAFNPVDNPLHFSEETKPSPLVKPVTSPTYLWGNLDVFELRDSLHQKGLMD 604
Query: 566 AESE---DGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 615
A+ E +GF + + E ++I++ T I +++ L ++I +++ L I
Sbjct: 605 AKVENVPNGFIIHIPS-EDTLIQIDQTSTHIMCSNEILRNKIKESLIKCLAKI 656
>gi|195590647|ref|XP_002085056.1| GD12515 [Drosophila simulans]
gi|194197065|gb|EDX10641.1| GD12515 [Drosophila simulans]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|195478621|ref|XP_002086517.1| GE22809 [Drosophila yakuba]
gi|194186307|gb|EDW99918.1| GE22809 [Drosophila yakuba]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALRHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|28574894|ref|NP_648838.3| integrator 9 [Drosophila melanogaster]
gi|16184460|gb|AAL13803.1| LD26912p [Drosophila melanogaster]
gi|28380509|gb|AAF49538.2| integrator 9 [Drosophila melanogaster]
gi|220945816|gb|ACL85451.1| CG5222-PA [synthetic construct]
gi|220955566|gb|ACL90326.1| CG5222-PA [synthetic construct]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|195495401|ref|XP_002095251.1| GE19796 [Drosophila yakuba]
gi|194181352|gb|EDW94963.1| GE19796 [Drosophila yakuba]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|432945663|ref|XP_004083710.1| PREDICTED: integrator complex subunit 9-like [Oryzias latipes]
Length = 656
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATSWKNKDM 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLP L+ D ++ C I V +S+VQ + + ++ G + + S
Sbjct: 162 QRLLPGPLK------DAVDVWTWKRCYGIQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII +AY+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVAYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGEF------CSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + F++ ++L P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIDSANLGTTPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSGLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVAKLLKEVQPLHVVCPEQY 475
>gi|195327963|ref|XP_002030686.1| GM24446 [Drosophila sechellia]
gi|194119629|gb|EDW41672.1| GM24446 [Drosophila sechellia]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTACLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLP 522
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|348506398|ref|XP_003440746.1| PREDICTED: integrator complex subunit 9-like [Oreochromis
niloticus]
Length = 657
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATSWKNKEI 161
Query: 103 LELLPSALRKIALGEDGSE--LGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+LP L+ D + + C + V +SKVQ + + ++ G + + S
Sbjct: 162 QRMLPGPLK------DAVDVWMWKRCYSMQEVNSALSKVQLVGYSQKVELFGAVQVSPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGE------FCSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + F+E ++L P Y IS +A L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIESANLGTTPFYFISPIANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQY 475
>gi|345498046|ref|XP_003428131.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
[Nasonia vitripennis]
Length = 662
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 245/546 (44%), Gaps = 73/546 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF IY TE +IG+ MEEL+ EY + ++ W E
Sbjct: 109 MLALPFITEGTGFKGAIYATEPTLQIGRFFMEELV----EYIE-QAPRDTMARHWK--EM 161
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
L +LP L + + +A V ++ +Q + + ++ G L + SSG
Sbjct: 162 LHVLPPPLSDCLKPKSWKHIYS----MAAVNSALANIQLVGYDQKLDIFGALAVTPISSG 217
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+G+ NW+IS +AY+SGS+ + H + ++ ++L++ + L+ + +
Sbjct: 218 YCLGSSNWLISSDHEKVAYVSGSSTLTTHPRPMEQTTLKHANLLILTGLAQMPA------ 271
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
+N D + E+ C ++++GG VLIP GV L
Sbjct: 272 -----------------ANPDTMLGEL------CMTVAMTLRSGGCVLIPCYPSGVVYDL 308
Query: 283 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L+
Sbjct: 309 FECLSSHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFLV 368
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENEV 400
K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 369 KNARLKYFTSTYAEGFSTDYRQPCVVFCGHPSLRFGDAVHFIQMWGNSPQHTIIFTEPDF 428
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 451
A+ PF+P++MK + C + + L++ L+P ++ PE + R
Sbjct: 429 PYIEALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPDNLVIPERYMQPPMTAPHRAD 488
Query: 452 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
+ V + + E I +P + + I ++A ++ L++ + G L
Sbjct: 489 LVIEPVGEKPLITFKRGEVIKLPLKRRRGRIFIEPELADNIIPSEIR-PGLSLASVSGEL 547
Query: 512 FVNHGKHQLLPENEP----------GGSSQTRPFL---------HWGSPDPENLLAELSK 552
V + + +N P G SS P +G+ DP+ LL +L +
Sbjct: 548 EVKDNVYTI--KNIPSRSNGDRKRKGSSSNPVPVKEELMKERKHEYGNLDPQELLQKLIQ 605
Query: 553 MGINGS 558
GI G+
Sbjct: 606 EGITGA 611
>gi|380023750|ref|XP_003695675.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Apis
florea]
Length = 661
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/590 (23%), Positives = 268/590 (45%), Gaps = 76/590 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF IY TE +IG+ MEEL+ + + A+ W+E
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELVEFIEQTPKAILAKH--------WKE 160
Query: 103 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
L +LPS L + + ++ V +S +QT+ + ++ G L + SS
Sbjct: 161 MLHVLPSPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPISS 216
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 217 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 271
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 ------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVYD 307
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 308 LFECLSTHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 367
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 399
+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 368 VKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEPD 427
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 450
A+ PF+P++MK + C + + L++ L+P+ ++ PE + RT
Sbjct: 428 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHRT 487
Query: 451 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
+ V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 488 DLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGE 546
Query: 511 LFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGI 555
L V + + E+ P G S P +G+ DP+ LL +L++ GI
Sbjct: 547 LEVKDNVYTIKSIEDRPSGKRKAPSGSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGI 606
Query: 556 NGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 607 QGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|118786554|ref|XP_556128.2| AGAP005494-PA [Anopheles gambiae str. PEST]
gi|116126379|gb|EAL39840.2| AGAP005494-PA [Anopheles gambiae str. PEST]
Length = 665
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 261/590 (44%), Gaps = 82/590 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
ML LP++T GF ++Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 109 NMLALPYITEGTGFCGEVYATEPTLQIGRFFLEELV----EYIEASPKESTA----RMWK 160
Query: 102 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E++ LP L + ++ L + V +++V+ + ++ G L + S
Sbjct: 161 EIQHQLPMPLNDVFKPKNWRHLFS----MDAVNKSLARVRMTGYDQKLDIFGALQVTPIS 216
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW I + I+YISGS+ + H + A++ SD+++ + L+
Sbjct: 217 SGFCLGSSNWTIVSGQEKISYISGSSTLTTHPRPINQTALKYSDVVIMTGLTQAPHV--- 273
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
N D + E+ C + +++ GGSVLIP GV
Sbjct: 274 --------------------NPDAMLGEL------CMNVMMTLRNGGSVLIPCYPSGVVY 307
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E +++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 308 DLFECLSVSLDNQGFTQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHAS 367
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 398
L+K K+ F + S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 368 LVKNAKLKHFKHIDSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPLHTIIFTEP 427
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 428 DFPHMQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPAIAPQK 487
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
+ + + + E I +P ++ + + +A + + Q + ++ + G
Sbjct: 488 LDLVIDPIPDKMIIKFKRGEVIKLPLKRKRGRVYLNPKMAKTICPQEV-QPGVTVSTVTG 546
Query: 510 RLFVNHGKHQLLP------------ENEPGGSSQTRPFLH-----WGSPDPENLLAELSK 552
L V H LLP +++P G Q L WG+ D LL +L++
Sbjct: 547 VLQVKDNIHDLLPLEPTKEELADEHKSKPAGPPQPYSQLRTVRYEWGTLDINLLLKKLAQ 606
Query: 553 MGINGSVERCMTDAESEDGFTVKVQ---DPEKSMIEVRAAVTVISAADKN 599
G TD + E G +V E ++I+V T I K
Sbjct: 607 DG--------FTDLKVEQGSADEVTLLLPSEDTVIKVSEKSTDIVCGGKQ 648
>gi|198430712|ref|XP_002123221.1| PREDICTED: similar to Integrator complex subunit 9 (Int9) (Protein
related to CPSF subunits of 74 kDa) (RC-74) [Ciona
intestinalis]
Length = 656
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 191/412 (46%), Gaps = 44/412 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELI--CMNMEYRQFYGAEESSGPQWMKW 100
M+ LP++T GF +Y TE +IG+L+MEEL+ C N + SG W K
Sbjct: 109 MMALPYITEYFGFKGTVYATEPTIQIGRLLMEELVQFCHN-------SPKNKSGGLWKKH 161
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+ + LP A E C V+ +SK+ + + E G L + A S
Sbjct: 162 KYYQQLPGY---NAGCETSLATWRNCYSYDDVQTAVSKIHVVGYAELVSIFGALNVTAHS 218
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+CNW+I + YISGS+ H D + +Q SD+I+++ L+
Sbjct: 219 SGYSLGSCNWVIGTEFEKVVYISGSSSLVTHPQPLDQQPLQDSDVIIFTGLT-------- 270
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+ DN LA C +VK GG+VLIP G+
Sbjct: 271 HAPQHNPDNT---------------------LAEFFFCLAKTVKGGGNVLIPCLPTGLIY 309
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + ++ME +++ IPIY+IS A+ LA + EWL +Q K + + F H +
Sbjct: 310 DLLECLLLYMEKTNIINIPIYLISPSAKASLALSQIYAEWLHPNKQNKSYLPETPFPHDQ 369
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG-DHNSLLVLEN 398
L+ ++ VF ++H L +++PCIVF+ H SLR+G +H + W NS++ +E
Sbjct: 370 LVSLGRLKVFSSIHD-GLSHGFKKPCIVFAGHPSLRMGDAVHFVEMWGKCSLNSIIFVEP 428
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT 450
A+ PF+P++ + + Q ++ L P+ V+ P + T
Sbjct: 429 SYSHLDALAPFQPLTARAFHFPIDTRTTHQAASRMIDSLNPRQVVVPPSYMT 480
>gi|350408417|ref|XP_003488397.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Bombus
impatiens]
Length = 644
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/589 (23%), Positives = 271/589 (46%), Gaps = 76/589 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 101
ML LPF+T GF IY TE +IG+ MEEL+ E+ E++ K W+
Sbjct: 94 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV----EF-----IEQTPKATLAKHWK 144
Query: 102 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E L +LP L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 145 EMLHVLPPPLADALKPKSWKHIYS----ISAVNTSLSYIQTVGYDQKLDIYGALTVTPIS 200
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 201 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 256
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++ GG VLIP GV
Sbjct: 257 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 291
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 292 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 351
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 352 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 411
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 457
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + + ++
Sbjct: 412 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 471
Query: 458 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
T + + E I +P ++ + I ++A ++ L++ + G L
Sbjct: 472 TDLVIEPEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGEL 530
Query: 512 FVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGIN 556
V + + E+ P G SS P +G+ DP+ LL +L++ GI
Sbjct: 531 EVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGIQ 590
Query: 557 GSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 591 GAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 633
>gi|383862659|ref|XP_003706801.1| PREDICTED: integrator complex subunit 9-like [Megachile rotundata]
Length = 661
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/572 (24%), Positives = 262/572 (45%), Gaps = 77/572 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 101
ML LPF+T GF IY TE +IG+ MEEL+ +F E++ K W+
Sbjct: 109 MLALPFITEDSGFKGIIYATEPTLQIGRFFMEELV-------EF--IEQTPKATLAKHWK 159
Query: 102 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E L +LP L + + ++ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPPPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
L+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPMTAPHR 486
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 510 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 554
L V + + E+ P G S P +G+ DP+ LL +LS+ G
Sbjct: 546 ELEVKDNVYTIKNIEDRPSGKRKVSSGSPAPIKEEVLKERKHEYGNLDPQELLQKLSQEG 605
Query: 555 INGSVERCMTDAESEDGFTVKVQDPEKSMIEV 586
I G+ + S ++ +QD E ++I++
Sbjct: 606 IQGAKLQ-----HSPTSTSIHLQD-EDTLIQI 631
>gi|346467411|gb|AEO33550.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 45/440 (10%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
V +SKV+ + F E+ G++ + A SSG +G+CNWI++ I Y+SGS+ + H
Sbjct: 55 VNSSLSKVKVVGFAEKVDVFGMVQVSAVSSGYCLGSCNWIVTADHEKIVYMSGSSTLTTH 114
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
++ ++ +D ++ L+SL T L+N D + E
Sbjct: 115 PKPIEHAPLRNADALI---LTSLTQTP--------------------LANPDTMLGEF-- 149
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS-LKIPIYIISSVAEELL 310
C +VK GG+VLIP GV L E ++ +E + + +P+Y +S VAE L
Sbjct: 150 ----CITVAMTVKMGGNVLIPCYPSGVTYDLFECLSGHLETTGQVNVPMYFLSPVAENSL 205
Query: 311 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
AY++ + EWL +Q K++ + F H +L++ ++ F ++ + ++ PCIVF+
Sbjct: 206 AYSSILAEWLSSAKQAKVYIPEEPFPHAQLVRGGRLKPFSSIKAEGFTADFHTPCIVFAG 265
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 429
H SLR G +H + W N++++ E + + A+ PF+P++MK L + +
Sbjct: 266 HPSLRFGDVVHFMELWGPSPNNVVIFTEPDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQ 325
Query: 430 VQPLLKILQPKLVLFPEEWR----THVSFSDV---TSFSVSHYSENETIHIPSLKESAEL 482
L++ L+P ++ P ++ SD+ T V Y+ +HIP + +
Sbjct: 326 ANKLIRDLKPTNLVLPLQYTLPPLLQPHRSDLVIETECEVQTYTRGSIVHIPVQRRYQRI 385
Query: 483 EIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLP-ENEPGGS----SQTRPFLH 537
E+++++AS +K L I L G L VN+ + L P + +P GS QT P ++
Sbjct: 386 EMSSELASSLVPVEVK-CGLGIATLTGALHVNNNRCVLKPLQKDPSGSKKWNGQTPPKIY 444
Query: 538 -WGSPDPENLLAELSKMGIN 556
WGS D +L K G
Sbjct: 445 TWGSLDVTEFARKLDKAGFT 464
>gi|125978461|ref|XP_001353263.1| GA18747 [Drosophila pseudoobscura pseudoobscura]
gi|195160209|ref|XP_002020968.1| GL25097 [Drosophila persimilis]
gi|54642017|gb|EAL30766.1| GA18747 [Drosophila pseudoobscura pseudoobscura]
gi|194118081|gb|EDW40124.1| GL25097 [Drosophila persimilis]
Length = 657
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 256/566 (45%), Gaps = 51/566 (9%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E+L LLPS L + + + + V+ + KV + + E+ G I S
Sbjct: 159 EKLHLLPSPLCEAFRAKKWRTIFS----LKDVQGSLLKVTIMGYDEKLDILGAFIATPVS 214
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 453
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
F + + + E + +P ++ + + +++ K R + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEILRLPLKRKLDRIYLTYELSQKIFPREV-AAGVTFSTLTGVLQV 544
Query: 514 NHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFT 573
H + P E + +P E++L ++ + VE M ++DGFT
Sbjct: 545 KDKVHCIQPCAEIKEEPSSSSAGTAAAPTKEDVLQKVKYEYGSIDVEAVMKRL-TQDGFT 603
Query: 574 -VKVQDPEKSM-IEVRAAVTVISAAD 597
+K+ + S+ I++ T+I D
Sbjct: 604 NIKLDRTDGSLSIQLVNEDTIIKFED 629
>gi|380023752|ref|XP_003695676.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Apis
florea]
Length = 644
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 268/588 (45%), Gaps = 74/588 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF IY TE +IG+ MEEL+ + + A+ W+E
Sbjct: 94 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELVEFIEQTPKAILAKH--------WKE 145
Query: 103 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
L +LPS L + + ++ V +S +QT+ + ++ G L + SS
Sbjct: 146 MLHVLPSPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPISS 201
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 202 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 256
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+N D + E+ C +++ GG VLIP GV
Sbjct: 257 ------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVYD 292
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 293 LFECLSTHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 352
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 399
+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 353 VKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEPD 412
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDVT 458
A+ PF+P++MK + C + + L++ L+P+ ++ PE + + ++ T
Sbjct: 413 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHRT 472
Query: 459 SFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF 512
+ + E I +P ++ + I ++A ++ L++ + G L
Sbjct: 473 DLVIEPEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGELE 531
Query: 513 VNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGING 557
V + + E+ P G S P +G+ DP+ LL +L++ GI G
Sbjct: 532 VKDNVYTIKSIEDRPSGKRKAPSGSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGIQG 591
Query: 558 SVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 592 AKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 633
>gi|322799917|gb|EFZ21058.1| hypothetical protein SINV_14498 [Solenopsis invicta]
Length = 675
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 142/605 (23%), Positives = 273/605 (45%), Gaps = 93/605 (15%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW-- 100
ML LPF+T GF IY TE +IG+ MEEL+ E+ E + K+
Sbjct: 110 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EF-----IERTPKATMAKYWK 160
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+ L +LPS L +I + +A V +S +QT+ + ++ G L + S
Sbjct: 161 DMLHMLPSPLAEIR-----PKSWKHIYSMAAVNSALSNIQTVGYDQKLDIYGALTVTPIS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H D ++ ++L++ + L+ +
Sbjct: 216 SGFCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMDQATLKHANLLILTGLTQTPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++AGG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFTQVPLFFISPVAESSLAYSNILAEWLSTGKQNKVYLPEEPFPHAF 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
L+K ++ + + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTVIFTEP 426
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYIDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPAMAQHR 486
Query: 450 THVSFSDVTSFS--------------VSHYSENETIHIPSLKESAELEIAADIASKFQWR 495
T + + S + + E I +P ++ + I ++AS
Sbjct: 487 TDLVIEPIGRVSSKITCIISLFKDKPLITFKRGEVIKLPLKRKKGRVFIEPELASSIVPS 546
Query: 496 MLKQKKLNITRLKGRLFVNHGKHQLLP-ENEPGGSSQTR-----PFL---------HWGS 540
++ L++ + G L V + + E+ P G + P + +G+
Sbjct: 547 EVR-PGLSLASVTGELEVKDNVYTIKSVEDRPSGKRKMSLGSPAPIVEEVLKERKHEYGN 605
Query: 541 PDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKN 599
DP+ LL +L++ G +G+ + S ++ +QD E ++I++ T + D+
Sbjct: 606 LDPQELLQKLNQEGFHGAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQK 659
Query: 600 LASRI 604
+ R+
Sbjct: 660 IRKRL 664
>gi|241050126|ref|XP_002407379.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215492202|gb|EEC01843.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 644
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 218/460 (47%), Gaps = 54/460 (11%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 101
ML LP++T GF +Y+TE IG+ M+EL+ E + P+ KW+
Sbjct: 108 MLALPYVTEGTGFKGTVYMTEPTLLIGRQFMDELVTY---------IERTPKPRTATKWK 158
Query: 102 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159
+ + L LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 159 QQAVKFPQLSSQDLGKPRSWKQLYN----MHDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 214
Query: 160 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 219
SSG +G+CNWI++ Y+SGS+ + H ++ ++ +D+++ L+SL T
Sbjct: 215 SSGYCLGSCNWIVTADHEKAMYMSGSSTLTTHPKPIEHGPLRNADVLI---LTSLTQT-- 269
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
L+N D + E C +VK GG+VLIP GV
Sbjct: 270 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 305
Query: 280 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 338
L E ++ +E + + +P+Y +S VA+ LAY++ + EWL +Q K++ + F H
Sbjct: 306 YDLFECLSGHLETTGQVNVPMYFLSPVADNSLAYSSILAEWLSSAKQAKVYLPEEPFPHA 365
Query: 339 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 397
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 366 QLVRGGRLKPFSSIQAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSSNNVVIFTE 425
Query: 398 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT----HVS 453
+ + A+ PF+P++MK L + + L++ L+P ++ P +
Sbjct: 426 PDFNLADAIAPFQPMAMKALCFPIDTSLSFVQANKLVRDLKPSNLVLPRQHTVPPLLQPH 485
Query: 454 FSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIAS 490
SD+ V ++ +HIP + +E+ A++AS
Sbjct: 486 RSDLVIEADCDVQTFTRGSIVHIPVHRRYQRIEMNAELAS 525
>gi|307202731|gb|EFN82022.1| Integrator complex subunit 9 [Harpegnathos saltator]
Length = 608
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 247/544 (45%), Gaps = 71/544 (13%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 101
ML LPF+T GF IY TE +IG+ MEEL+ +F E++ K W+
Sbjct: 78 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV-------EF--IEQTPKTTLAKHWK 128
Query: 102 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
E L +LP L + + + ++ + +S +Q + + ++ G LI+ S
Sbjct: 129 EMLHVLPCPLADVIKPKSWRHIYS----VSAINSALSNIQLVGYDQKLDIYGALIVTPIS 184
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 185 SGYCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMEQATLKNANMLILTGLTQTPT---- 240
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E+ C +++AGG VLIP GV
Sbjct: 241 -------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVY 275
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 276 DLFECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 335
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 398
L+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 336 LVKNARLKHFTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTIIFTEP 395
Query: 399 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 449
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 396 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPLTASHR 455
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
+ V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 456 ADLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGSIVPNEIR-PGLSLASVTG 514
Query: 510 RLFVNHGKHQLLPENE------PGGSSQTRPFL---------HWGSPDPENLLAELSKMG 554
L V + + + SS P +G+ DP+ LL +LS+ G
Sbjct: 515 ELEVKDNVYTIKAIEDRSSIKRKASSSSPVPVKEEVLKERKHEYGNLDPQELLQKLSQEG 574
Query: 555 INGS 558
G+
Sbjct: 575 FQGA 578
>gi|391329424|ref|XP_003739174.1| PREDICTED: integrator complex subunit 9-like [Metaseiulus
occidentalis]
Length = 641
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/586 (24%), Positives = 267/586 (45%), Gaps = 80/586 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-- 99
ML LPF+T F ++Y+TE A IG+L MEELI EY + P+ +
Sbjct: 106 NMLALPFITEDSNFRGEVYMTEPTALIGRLYMEELI----EY-----IDRCPKPKVAQKI 156
Query: 100 WEELELLPSALRKIALG---EDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
++E+E LG DGS++ + +V +C++KV+T+ F ++ G L
Sbjct: 157 YKEIEFFGQ------LGPFHTDGSKVSLWQEIYTLKNVANCLTKVKTVGFNQKLSIFGNL 210
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
+ S+G +G+CNW+I I Y++ S+ + H +++ ++G D++L + L
Sbjct: 211 QVSCASAGYCVGSCNWMIQSDMEKIGYMASSSTFTTHPKPIEHQFLRGVDVLLIASL--- 267
Query: 215 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 274
+Q+ ++ N EL C +++K+GG+VLIP +
Sbjct: 268 ------NQTPLANPNTLLGEL--------------------CQAVENTLKSGGNVLIPCS 301
Query: 275 RVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 334
GV L E ++ +E + +Y +S VA + LAY+ + EWL +Q+K++ +
Sbjct: 302 SAGVVYDLFECLSGHLESKGILNTMYFVSPVAHKSLAYSGILAEWLTAAKQQKVYIPEEP 361
Query: 335 FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSL 393
F H L+K ++ V+ ++ + + P +VF+ H SLR G ++HL+ W D N++
Sbjct: 362 FPHSHLMKCGRLKVYESIADEAFMNEFHVPSVVFAGHPSLRFGDSVHLMELWQNDPSNAV 421
Query: 394 LVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLV----LFPEEWR 449
+ E + + AV PF+PIS+KVL + + LL+ ++P ++ ++ E
Sbjct: 422 IFTEPDFNYVDAVAPFQPISIKVLYYPIDTLLTFSQANKLLREMRPNVLVTHNVYNEAPA 481
Query: 450 THVSFSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNIT 505
+ S+V F E + IP + ++E+ +A + KK + ++
Sbjct: 482 NCTNRSEVALEPEFRFLTVKRPEVVQIPIKRRIQKVEMDPKLADDVVPVETEFKKGVAVS 541
Query: 506 RLKGRLFVNHGKHQLLPENEPGGSSQTRPFLH-WGSPDPENLLAELSKMGINGSVERCMT 564
L L V + + L G + T H +G + A+L+K G +
Sbjct: 542 SLTASLTVKNNQCTL------GKPTNTTKISHPYGELSVKQFTAKLAKQGFVDIKTETIG 595
Query: 565 DAES----EDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVK 606
+A + +G ++++D + + + D + SRI K
Sbjct: 596 NATTIHLPREGVLIRLED---------HSTHICDSVDTTVRSRIQK 632
>gi|307189043|gb|EFN73542.1| Integrator complex subunit 9 [Camponotus floridanus]
Length = 661
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/590 (22%), Positives = 266/590 (45%), Gaps = 76/590 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
ML LPF+T GF IY TE +IG+ MEEL+ E+ + + W+E
Sbjct: 109 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EFIE----QTPKATMAKHWKE 160
Query: 103 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
L +LP L + + + + V +S +Q + + ++ G L + SS
Sbjct: 161 MLHMLPPPLADVIKPKSWRHIYS----TSAVNSALSHIQMVGYDQKLDIYGALTVTPISS 216
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 217 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 271
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+N D + E+ C +++AGG VLIP GV
Sbjct: 272 ------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVYD 307
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 308 LFECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 367
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENE 399
+K ++ + + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 368 VKNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTVIFTEPD 427
Query: 400 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 450
A+ PF+P++MK + C + + L++ L+P+ ++ PE + RT
Sbjct: 428 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPLTAPHRT 487
Query: 451 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 510
+ V + + E I +P ++ + I ++AS ++ L++ + G
Sbjct: 488 DLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELASNIIPNEVR-PGLSLASVTGE 546
Query: 511 LFVNHGKHQL--LPENEPG----GSSQTRPFL---------HWGSPDPENLLAELSKMGI 555
L V + + + + + G S P +G DP+ LL +L++ G
Sbjct: 547 LEVKDNVYTIKNIEDRQSGKRKASSGSPAPVKEEVLKERKHEYGILDPQELLQKLNQEGF 606
Query: 556 NGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 604
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 607 QGAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRKRL 650
>gi|340373691|ref|XP_003385374.1| PREDICTED: integrator complex subunit 9-like [Amphimedon
queenslandica]
Length = 637
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 235/525 (44%), Gaps = 56/525 (10%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
L LP+L GFS K+Y TE ++G+ +MEEL +F + W
Sbjct: 110 FLSLPYLFEF-GFSGKVYATEPTKQLGRQLMEELC-------EFLYRLPTPSKNWRDESI 161
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
L+ LP K + + + IS VQ + +G++ G + A SSG
Sbjct: 162 LQSLPECAVKTLTDVNSWKSFYKS---DDITSAISIVQGISYGQKLDLFGSVQATALSSG 218
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+G+CNW++ I Y+S S+ + H + +++ D ++ S L++ S
Sbjct: 219 YCLGSCNWLMETKYSKIGYVSSSSTFTTHPCPMERQSLLSCDALILSSLTNAPS------ 272
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
+N D + E+ C+ +++ GG+VLIP GV L
Sbjct: 273 -----------------ANPDTMLGEL------CTKMATTLRGGGNVLIPCYPTGVVYDL 309
Query: 283 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
LE + F++ + L +P+Y+IS VA+ L+ N EWLC+ +Q K++ + F H + I
Sbjct: 310 LECLHTFLDNAGLVGVPVYMISPVAKNSLSLANIYAEWLCEAKQSKVYQPEHPFPHAEFI 369
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENEV 400
K ++ FP ++ L +Q PC+VF+ H SLR G +H + W S NS++ E
Sbjct: 370 KSGRLKHFPNIYG-DLGNVYQTPCVVFAGHPSLRCGDAVHFMEVWGSSSKNSVIFTEPGF 428
Query: 401 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFS--DVT 458
D A+ P++P++MK LLK LQP++++ P ++ + + D T
Sbjct: 429 DYLHALTPYQPLNMKAFYFPIDPCMNFFVANKLLKELQPQVLITPTDYLPSAAQTQKDTT 488
Query: 459 SFS--VSHYS--ENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVN 514
+ Y + + + ++E+ +++AS + + + T L G L +
Sbjct: 489 CLQPEMPFYGVKRGSVVKVELASKYKKIEMTSELASTIFPQEINPGVM-ATSLSGLLTIR 547
Query: 515 HGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSV 559
G ++L P P +P WG + ++L+ L + GI V
Sbjct: 548 SGNNKLHPLPHP------KPKNLWGHTNAQSLIEALKEHGITDIV 586
>gi|345317717|ref|XP_003429920.1| PREDICTED: integrator complex subunit 9 [Ornithorhynchus anatinus]
Length = 643
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 252/560 (45%), Gaps = 64/560 (11%)
Query: 42 GMLGLPFLTRMEGFS--AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK 99
G G + +GF ++ +++ + +L+MEEL+ N R + S W
Sbjct: 104 GAAGRKLTSSSQGFPPGSRGLSADSSLPLPRLLMEELV--NFIERV---PKAQSASLWKN 158
Query: 100 WEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 157
E LLP+ L+ D E+ C + V +SK+Q + + ++ G + +
Sbjct: 159 KEVQRLLPAPLK------DAVEVATWRRCYTMPEVNSALSKIQLVGYSQKIELFGAVQVT 212
Query: 158 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 217
SSG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 PLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT- 271
Query: 218 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 277
+N D V E CS +V+ GG+VL+P G
Sbjct: 272 ----------------------ANPDGMVGEF------CSSLAMTVRNGGNVLVPCYPSG 303
Query: 278 VFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFA 336
V LLE + +M+ + L +P+Y IS VA L ++ EWLC +Q K++ +P F
Sbjct: 304 VIYDLLECLYQYMDSAGLSNVPLYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFP 363
Query: 337 HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLV 395
H +LI+ K+ +P++ ++++PC+VF+ H SLR G +H + W N+++
Sbjct: 364 HAELIQTNKLKHYPSIPG-DFSNDFKQPCVVFTGHPSLRCGDVVHFMELWGRSGLNTVIF 422
Query: 396 LENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----TH 451
E + A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 423 TEPDFSYLEALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQ 482
Query: 452 VSFSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLK 508
D+ Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 AHRVDLVIGCHPPAMSYRRAEVLTLPFKRRYEKIEIVPELADSLVPMEIK-PGISLATVS 541
Query: 509 GRLFVNHGKH--QLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVE-RCMTD 565
L KH Q P++ P + R + PD + L LS GS+
Sbjct: 542 AMLHTKDNKHVLQPPPKSGPAPVGKKRKRVMDDIPDCKPLKPLLS-----GSIPVDQFVQ 596
Query: 566 AESEDGFT-VKVQDPEKSMI 584
A + GF+ VKV+D K I
Sbjct: 597 ALEKHGFSDVKVEDTAKGHI 616
>gi|302803362|ref|XP_002983434.1| hypothetical protein SELMODRAFT_422724 [Selaginella moellendorffii]
gi|300148677|gb|EFJ15335.1| hypothetical protein SELMODRAFT_422724 [Selaginella moellendorffii]
Length = 624
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 39/343 (11%)
Query: 40 PMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWM 98
P ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++
Sbjct: 117 PESMLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFT 176
Query: 99 KWEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILII 156
+ E +P AL+ LGE S + V C+ ++QTLR+GEEA +G +++
Sbjct: 177 QCE----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVL 232
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSL 214
+SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S
Sbjct: 233 TPYSSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPT 292
Query: 215 DSTEDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFI 255
S E ++ + F +N + NS+ + ++ LA +
Sbjct: 293 SSVEKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQV 352
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 315
+ A D++ GGSVLIP + L A C S I+ +S A+E LA+TNT
Sbjct: 353 ANAAADALSKGGSVLIPTSVSDTVL------ARSFLCKS----IFYVSPSAQEFLAFTNT 402
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLL 358
+PEWL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++
Sbjct: 403 VPEWLSSSRQEKLYNGESLFGHVELLKEGKLSHFPSL-SPEVV 444
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 433 LLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKF 492
L+ LQPK + PE ++ V+ S + + IPSL+E +E++AD+AS+
Sbjct: 452 LIDRLQPKFAVVPERLKSVVT---------SDCAHRAPLKIPSLEEELNMELSADLASRI 502
Query: 493 QWRMLKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAEL 550
+ + + + + RL + + G L P S + P G+PD + LL L
Sbjct: 503 KPKQTRSGNNVALARLSAEMHFHDGNFYL---EMPRVSRMIQTPQRFCGTPDVDALLRAL 559
Query: 551 SKMGINGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKA 607
+ G+ V+ + AE DG V V + IE+ + T+I +D L + A
Sbjct: 560 REKGL---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDPVLRRLVADA 616
Query: 608 MENILEGI 615
+ + L+ I
Sbjct: 617 VISCLQII 624
>gi|324506537|gb|ADY42789.1| Integrator complex subunit 9 [Ascaris suum]
Length = 646
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 221/483 (45%), Gaps = 54/483 (11%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M +L LPF T F +Y T+ ++G+L+MEE+ +EY + + QW +
Sbjct: 101 MSLLALPFFTERSEFRGTVYATDPTLQLGRLVMEEM----LEYLE-RSEKTKVDEQWKQH 155
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+ P+ D E G A ++ I++V L F + +L I A+S
Sbjct: 156 DVFANFPNVP-----SSDPREWIGFY-TRAQMQHAIARVHILSFHHTVNVSDVLTITAYS 209
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD-LILYSDLSSLDSTED 219
SG IG+CNW+I I Y+S ++ + H D+ ++GSD LIL S + + D
Sbjct: 210 SGYSIGSCNWVIRTEHEKIGYLSATSSRNSHTKAVDWDQLRGSDALILTSICRFPEHSPD 269
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
NS+ N + + +++K GSVL+P+ GV
Sbjct: 270 -----------------NSVCN-------------VFTVMAETLKKNGSVLMPMCPTGVL 299
Query: 280 LQLLEQIAIFMECS--SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
LLE I + ++ ++ IP+Y IS VAE +A++N PEWL ++Q + + F H
Sbjct: 300 YDLLEVITVQLDQQGVAMDIPVYFISPVAESSIAFSNIYPEWLSDKKQNMAYFPEEPFTH 359
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 396
L+K ++ VF ++H L + PCI+F+ H SLR G + L W + N++++
Sbjct: 360 AYLMKCGRLKVFESLHG-ALCHQLKTPCILFTGHPSLRFGEAVRFLELWGNNPRNAIIMT 418
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEW-RTHVSF 454
+ + + P++ ++++ + ++ P ++ L PKL+L PE + + +
Sbjct: 419 DPDYPLKDVYGPYQNLAIRAFFYPIDTRLDYSQLNPSIMPDLSPKLLLMPEAYVQPPATA 478
Query: 455 SDVTSFSVSH-----YSENETIHIPSLKESAELEIAADIASKFQWRML-KQKKLNITRLK 508
F V+H + + + IPS+ + + + ++ R +Q + I LK
Sbjct: 479 PQRVDFVVTHNPHTTFRYGDMLTIPSITKRKRIRLHPELLKSLNLRARGEQSDVGICALK 538
Query: 509 GRL 511
G L
Sbjct: 539 GYL 541
>gi|380793321|gb|AFE68536.1| integrator complex subunit 9 isoform 1, partial [Macaca mulatta]
Length = 423
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 44/347 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 386
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELW 412
>gi|320163036|gb|EFW39935.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 642
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 219/498 (43%), Gaps = 64/498 (12%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELI-CMNMEYRQF-YGAEESSGPQ 96
SP M LPF+T F+ ++Y T+A +L+MEE + C+ + Q YG+ S+G
Sbjct: 92 SPQAMQALPFVTERTAFAGRVYATDATVPFARLLMEETMRCVTKHFVQSGYGSSWSTG-- 149
Query: 97 WMKWEELELLPSALRKIALGEDGSELGGGCPC---IAHVKDCISKVQTLRFGEEACYNGI 153
A A L C +A ++ CISK+ L F + +
Sbjct: 150 -----------RAHAATATEHFDITLPAFCASWYSLAELESCISKIHRLSFNQRVNLYNL 198
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDL 211
I SSG IG CNW+I + Y++ ++ S HA FD L+ +
Sbjct: 199 CDIIPTSSGFGIGCCNWVIETPTERVFYMAATSLPSSQFHAQAFDMSP-------LHLGV 251
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
+S D ++ S + ++ L+ + N + + +CS + S++ GG+VL+
Sbjct: 252 ASEDPLSNLPPRSIMAPGSKFDVLVVADLNPAAPLPYSDATQKVCSTIVHSLQQGGNVLL 311
Query: 272 PINRVGV-FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
P V L+L+E + + ++L ++PIY++S A +A+ N + EWL +RQE+++
Sbjct: 312 PCTPASVATLELIEAVHHTLIAANLARVPIYLVSPEANAAVAFANIMSEWLASERQEQVY 371
Query: 330 SGDPLFAHVKLIKEKKIH------------VFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
+ F HV+ I +K+H PAV P + + Q CIV + H SLR G
Sbjct: 372 LPENPFPHVEWIDSQKLHQVATVAASVRSLTTPAV--PAVFLQRQ--CIVLASHPSLRFG 427
Query: 378 PTIHLLRRWSGDHNSLLVLEN-EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKI 436
+H LR W D ++ +L + E + PF+P+ M V V LLK
Sbjct: 428 DALHFLRLWGNDSRNMTILTDPSYQPEDLLQPFQPLQMAVSYIPLDRRLATSDVGSLLKN 487
Query: 437 LQPKLV------LFPEEWRTHVSFSDVTS------------FSVSHYSENETIHIPSLKE 478
++P L+ L P + + D+TS +V +TI +PS
Sbjct: 488 VRPDLIPSNIVLLLPGKSDQRSAIYDLTSDLEQNFHAALSPPAVHILEHGDTIRMPSTNR 547
Query: 479 SAELEIAADIASKFQWRM 496
L+++ +AS RM
Sbjct: 548 DCRLQVSHQLASSIIPRM 565
>gi|297299164|ref|XP_001111495.2| PREDICTED: integrator complex subunit 9-like [Macaca mulatta]
gi|221041112|dbj|BAH12233.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 221/473 (46%), Gaps = 51/473 (10%)
Query: 126 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 26 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 85
Query: 186 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 86 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 122
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 123 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 176
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 177 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 235
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 423
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 236 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 295
Query: 424 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 475
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 296 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 354
Query: 476 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 533
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 355 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 413
Query: 534 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 414 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 461
>gi|426359249|ref|XP_004046894.1| PREDICTED: integrator complex subunit 9 [Gorilla gorilla gorilla]
Length = 682
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 256/582 (43%), Gaps = 88/582 (15%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQE------------- 326
LLE + +++ + L +P+Y IS VA L ++ EW +R
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWYFIKRMSVQLADYLEGTWEF 366
Query: 327 KLFSGDPLFAHVK-----------LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+ SG + K LI+ K+ +P++H ++++PC+VF+ H SLR
Sbjct: 367 DVCSGISIHIPSKHATADEDLQDSLIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLR 425
Query: 376 LGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLL 434
G +H + W N+++ E + A+ P++P++MK + C + +V LL
Sbjct: 426 FGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLL 485
Query: 435 KILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPSLKESAELEIAA 486
K +QP V+ PE++ ++H D ++S Y E + +P + ++EI
Sbjct: 486 KEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMP 544
Query: 487 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPE 544
++A +K +++ + L KH L P P S + R + PD
Sbjct: 545 ELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-- 601
Query: 545 NLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
++ K ++GS VE+ + E +KV+D K I
Sbjct: 602 ---CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 640
>gi|312074711|ref|XP_003140092.1| hypothetical protein LOAG_04507 [Loa loa]
gi|307764740|gb|EFO23974.1| hypothetical protein LOAG_04507 [Loa loa]
Length = 575
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 226/525 (43%), Gaps = 70/525 (13%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MK 99
M +L LPF T FS IY T+ ++G+L+MEEL+ F+ + +W
Sbjct: 101 MSLLALPFFTEETNFSGVIYATDPTLQLGRLVMEELL-------DFFDRVDRE--EWDYS 151
Query: 100 WEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIK 157
W++ L S A D E P + +++C++KVQ + F E +G +
Sbjct: 152 WKKPGLFMSFPNVPA--SDPREWR---PFYSREQMENCLAKVQRVSFREPINIHGAATVA 206
Query: 158 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 217
A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++
Sbjct: 207 AYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALI---------- 256
Query: 218 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 277
+ S+ + E E A D++K GSVL+PI G
Sbjct: 257 ------------------LTSICRFPEHSPETSVCHAFAVIA-DTLKRNGSVLMPICPTG 297
Query: 278 VFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 335
V LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q + + F
Sbjct: 298 VLYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMVNIPEEPF 357
Query: 336 AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 394
H + ++ V+ ++ + PC++F+ H SLR+G +H L W D N+L+
Sbjct: 358 KHGLTTRNGRLKVYDNIYG-DFCRQMRTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALI 416
Query: 395 VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEWRTHVS 453
+ + + + P++ +S++ + ++ P +L L PKL++ PE R
Sbjct: 417 MTDPDYPIQNVYGPYEKLSIRAFFFPIETRLDFSQLNPSILPDLAPKLLVMPENARATFR 476
Query: 454 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLK-QKKLNITRLKGRLF 512
+ D T IPS ++ + + D + + + ++ LKG L
Sbjct: 477 YGD-------------TFTIPSTTKTKRVRLHPDTLRTIELHGHRDHSDIGLSSLKGVLS 523
Query: 513 VNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGING 557
V +L P+ + LH PE L K G+ G
Sbjct: 524 VYDNILELNPDTGTKIRNVCVGKLH-----PEIFAQTLGKFGLRG 563
>gi|115451851|ref|NP_001049526.1| Os03g0243200 [Oryza sativa Japonica Group]
gi|113547997|dbj|BAF11440.1| Os03g0243200 [Oryza sativa Japonica Group]
Length = 233
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 123/185 (66%), Gaps = 17/185 (9%)
Query: 129 IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 188
+ ++++C+ K Q +++GEE C+NG+L++KA SSGL++G C W I G + ++ Y+ S F
Sbjct: 36 LDNIEECMQKTQYVKYGEEVCFNGMLMLKASSSGLELGNCVWTIKGPRASMTYLPSSIFV 95
Query: 189 SGHAMDFDYRAIQGSDLILYSDLSSLDSTED---------IDQ--------SSFSDDNNN 231
S HA+DFDY +++G+D+IL+SD SSL+ D +D+ S F DD +
Sbjct: 96 SAHALDFDYSSLKGNDVILFSDFSSLNGMYDDNKKMGEHIVDETDILLASNSVFRDDGMD 155
Query: 232 WEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME 291
+E + L + D+ EE+E+++FICSC ID++ +GGSVLIPI R+G+ L LLE ++ +
Sbjct: 156 EDETIKFLCSNDDIAEEIERISFICSCIIDAINSGGSVLIPIGRIGIILLLLEHMSETLH 215
Query: 292 CSSLK 296
S++K
Sbjct: 216 SSNMK 220
>gi|66811780|ref|XP_640069.1| integrator complex subunit 9 [Dictyostelium discoideum AX4]
gi|74855024|sp|Q54SH0.1|INT9_DICDI RecName: Full=Integrator complex subunit 9 homolog
gi|60468086|gb|EAL66096.1| integrator complex subunit 9 [Dictyostelium discoideum AX4]
Length = 712
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 202/427 (47%), Gaps = 56/427 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-W 100
+ LPF+T F KIY TE +IG+L++EEL+ M+ +Y ++ W
Sbjct: 127 NIYALPFITEYTNFQGKIYATEPTVQIGKLLLEELVQMDKQYSNSSINNNNNNNNLSDCW 186
Query: 101 EELELLPS------ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
+ +E+L + L D I ++ K+Q++RF E + G
Sbjct: 187 QNIEILEKLNVHNVGMENENLYRDSYRWKDLYKKI-DIEKSFEKIQSIRFNESIKHYGFE 245
Query: 155 IIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFA-SGHAMDFDYRAIQGSDLILYSDL 211
I + SSG +G+ NW+I +KG + YIS S+ + S + F I D+++ S +
Sbjct: 246 CIPS-SSGYGLGSANWVIE-SKGFERVVYISDSSLSLSRYPTPFQLSPIDNPDVLILSKI 303
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
+ NN +++++ L CS +++ GG+VLI
Sbjct: 304 NHY-------------PNNPPDQMLSEL----------------CSNIGSTLQQGGTVLI 334
Query: 272 PINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 330
P G+ L L E +A ++ L +PIY +SSV++ +L+Y + EWL K +QE+ F
Sbjct: 335 PSYSCGIILDLFEHLADYLNKVGLPYVPIYFVSSVSKAVLSYADIYSEWLNKSKQERAFM 394
Query: 331 GDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ--EPCIVFSPHWSLRLGPTIHLLRRWSG 388
+ F H L+++ + + VHS N+Q +PCI+F+ H S R+G L++ +
Sbjct: 395 PETPFLHQDLMRKGQFQAYQHVHS-----NFQANDPCIIFTGHPSCRIGDITTLIKLYDN 449
Query: 389 DHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGK---KLQKVQPLLKILQPKLVLFP 445
NS+L++E + D + VLPF S ++ + FL + L+ L PK ++ P
Sbjct: 450 PKNSILLIEPDFDFKSTVLPF---SKQISRIQFLPIDPRINFNEANLLISKLSPKHLIIP 506
Query: 446 EEWRTHV 452
++ +V
Sbjct: 507 RIYKNYV 513
>gi|330846631|ref|XP_003295119.1| hypothetical protein DICPUDRAFT_160278 [Dictyostelium purpureum]
gi|325074250|gb|EGC28355.1| hypothetical protein DICPUDRAFT_160278 [Dictyostelium purpureum]
Length = 717
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 203/427 (47%), Gaps = 56/427 (13%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
+ LPF+T F KI+ TE +IG+L++EEL+ M+ +Y ++ + KW+
Sbjct: 108 NIYSLPFITEYTNFQGKIFATEPTVQIGKLLLEELVQMDKQYSNHNYNINNNNNLFDKWQ 167
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKD---------CISKVQTLRFGEEACYNG 152
E+L KI + G+E KD K+QT+RF E + G
Sbjct: 168 NREML----TKINIANYGNENEIMYKDSYRWKDLYKKLDIEKSFEKIQTVRFNESIYFYG 223
Query: 153 ILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFA-SGHAMDFDYRAIQGSDLILYS 209
A SSG +G+CNW+I AKG + Y+S ++ + S + F ++ D+++ S
Sbjct: 224 -FECSAVSSGFCLGSCNWVIE-AKGFERMVYMSDTSLSVSRYPTVFQMEPLEKPDILILS 281
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDS-VKAGGS 268
L NN+ L DE E+ S +I S +++GG+
Sbjct: 282 KL-----------------NNHPINLP------DEMFTEL-------SLSIGSTLQSGGN 311
Query: 269 VLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 327
V+IP G+ L LLE +A ++ +L IY ISSV++ +L+Y + EWL K +QE+
Sbjct: 312 VIIPSYSCGIILDLLEHLAEYLNQMNLASTQIYFISSVSKAVLSYADIYAEWLNKNKQER 371
Query: 328 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
F + F H L+K+ ++ F +HS EPCI+F+ H S R G L++++
Sbjct: 372 SFMPETPFLHQDLMKKGQLAAFQHIHSH---FQTSEPCIIFAGHPSCRFGDVTTLIKQY- 427
Query: 388 GDH--NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFP 445
GD+ N++ ++E + D + VLPF ++ K + L+ L PK ++ P
Sbjct: 428 GDNPKNTVFLIEPDFDFKTLVLPFSKLTCKFQSIPIDPRINFKDANFLISKLAPKHLIIP 487
Query: 446 EEWRTHV 452
++ +
Sbjct: 488 NNFKNFI 494
>gi|47222695|emb|CAG00129.1| unnamed protein product [Tetraodon nigroviridis]
Length = 713
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 44/347 (12%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATCWKNKEI 158
Query: 103 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
+LP L+ D ++ C + V +S+VQ + + ++ G + + S
Sbjct: 159 QRMLPGCLK------DAVDVWTWKRCYSMQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 212
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 220
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 268
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+N D + E CS +++AGG+VL+P GV
Sbjct: 269 -------------------ANPDGMLGEF------CSNLAMTIRAGGNVLVPCYSSGVIY 303
Query: 281 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339
LLE + F+E ++L P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQFIESANLGTTPFYFISPVANSSLEFSQIFAEWLCNNKQSKVYLPEPPFPHAE 363
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 386
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W
Sbjct: 364 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELW 409
>gi|355696337|gb|AES00306.1| integrator complex subunit 9 [Mustela putorius furo]
Length = 298
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 151/299 (50%), Gaps = 32/299 (10%)
Query: 152 GILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDL 211
G + + SSG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L
Sbjct: 4 GAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGL 63
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
+ + + +N D V E CS +V+ GG+VL+
Sbjct: 64 TQIPT-----------------------ANPDGMVGEF------CSNLALTVRNGGNVLV 94
Query: 272 PINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 330
P GV LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++
Sbjct: 95 PCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYL 154
Query: 331 GDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH 390
+P F H +LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W
Sbjct: 155 PEPPFPHAELIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSS 213
Query: 391 -NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
N+++ E + A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 214 LNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 272
>gi|340385075|ref|XP_003391036.1| PREDICTED: integrator complex subunit 9-like [Amphimedon
queenslandica]
Length = 398
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 156/319 (48%), Gaps = 32/319 (10%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+ IS VQ + +G++ G + A SSG +G+CNW++ I Y+S S+ + H
Sbjct: 50 ITSAISIVQGISYGQKLDLFGSVQATALSSGYCLGSCNWLMETKYSKIGYVSSSSTFTTH 109
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ +++ D ++ S L++ S +N D + E+
Sbjct: 110 PCPMERQSLLSCDALILSSLTNAPS-----------------------ANPDTMLGEL-- 144
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELL 310
C+ +++ GG+VLIP GV LLE + F++ + L +P+Y+IS VA+ L
Sbjct: 145 ----CTKMATTLRGGGNVLIPCYPTGVVYDLLECLHTFLDNAGLVGVPVYMISPVAKNSL 200
Query: 311 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
+ N EWLC+ +Q K++ + F H + IK ++ FP ++ L +Q PC+VF+
Sbjct: 201 SLANIYAEWLCEAKQSKVYQPEHPFPHAEFIKSGRLKHFPNIYG-DLGNVYQTPCVVFAG 259
Query: 371 HWSLRLGPTIHLLRRW-SGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 429
H SLR G +H + W S NS++ E D A+ P++P++MK
Sbjct: 260 HPSLRCGDAVHFMEVWGSSSKNSVIFTEPGFDYLHALTPYQPLNMKAFYFPIDPCMNFFV 319
Query: 430 VQPLLKILQPKLVLFPEEW 448
LLK LQP++++ P ++
Sbjct: 320 ANKLLKELQPQVLITPTDY 338
>gi|281209154|gb|EFA83329.1| integrator complex subunit 9 [Polysphondylium pallidum PN500]
Length = 666
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 246/545 (45%), Gaps = 86/545 (15%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
+ LPF+T F KIY TE + G+L+++EL+ ++ ++S + W+
Sbjct: 112 NIYALPFITEYTSFKGKIYATEPTLQYGRLLLDELVQID---------KQSKTTRNQYWQ 162
Query: 102 ELELLPSALRKIALGEDGSELGGGC---PCIAH--VKDCISKVQTLRFGEEACYNGILII 156
++LL ++I + + H + C K+QT+RF E + G I
Sbjct: 163 SIDLL----KQIGAAQSNNVFKYAYYWRDLYNHHDTEKCFEKIQTVRFNEYLKFYG-FTI 217
Query: 157 KAFSSGLDIGACNWIISGAKGNIAYIS-GSNFASGHAMDFDYRAIQGSDLILYSDLSSLD 215
+A SSG +G NWI+ I Y+S SN+ + + FD ++++ +DL++ + L
Sbjct: 218 RAVSSGYCLGGSNWIVENNYEKIVYLSDSSNYNTRYPEPFDRQSLRNADLVIATKL---- 273
Query: 216 STEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 275
N + + +A + S ++ +GG+VLIP
Sbjct: 274 -------------------------NVYPQITLNDAIAELFSNIGSTLSSGGNVLIPTYS 308
Query: 276 VGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 334
G L LLE ++ ++ L + IY IS +A+ +L+Y + EWL + ++E+ + +
Sbjct: 309 CGTILDLLEPLSEYLSKVGLGFVHIYFISQIAKAVLSYADIYSEWLNRAKKERSYMPEAP 368
Query: 335 FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH--NS 392
F H +I+ + H P H +E IVF H S R+G +H++ W GD+ NS
Sbjct: 369 FLHQDMIRNQ--HFTPVTHITSRFQP-KEGSIVFVGHPSCRVGDVVHMINIW-GDNPKNS 424
Query: 393 LLVLENEVDAELAVLPFKPISMKVLQC--SFL---SGKKLQKVQPLLKILQPKLVLFPEE 447
+L++E E D + + PF + LQC F+ S ++ L+ + P ++
Sbjct: 425 ILLIEPEYDFKKTLQPFN----QQLQCRIQFIPIDSRFSTNEMNDLIMEISPSTLI---- 476
Query: 448 WRTHVSFSDVTSFSVSHYSENETIH-----IPSLKESAELE-----IAADIASKFQWRML 497
T ++++ S SE T + I +K+S++ + +A + Q ++L
Sbjct: 477 --TSYQYTNIIKNKQSSGSEGNTTYMNPNDIVKIKQSSKKRYENGHLDKTLAQQIQPKLL 534
Query: 498 ---KQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQT--RPFLHWGSPDPENLLAELSK 552
+ +++ +++ L ++ K+ L N SS + + WGS +N++ ++ +
Sbjct: 535 VDNGENSVSVAQIEAVLSLSDHKYHLTNPNISDLSSLSHWKEKYLWGSLSIQNIIKQIYQ 594
Query: 553 MGING 557
G N
Sbjct: 595 KGYNN 599
>gi|357456771|ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
gi|355487714|gb|AES68917.1| Integrator complex subunit [Medicago truncatula]
Length = 268
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 77/89 (86%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWM 98
SPMG++GLP+LTR +GFSAKIY+TEA+ARIGQLMME+L+ M+ E+RQFYG EES+ P W+
Sbjct: 177 SPMGIMGLPYLTRQKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPEESNFPPWL 236
Query: 99 KWEELELLPSALRKIALGEDGSELGGGCP 127
+ EELE+LPS L++I +G+DG ELGG P
Sbjct: 237 RQEELEILPSVLKEILVGKDGVELGGWMP 265
>gi|1930149|gb|AAB67601.1| unknown protein CIT987SK_2A8_1 [Homo sapiens]
Length = 409
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 22/343 (6%)
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 314
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 33 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 92
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 93 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSL 151
Query: 375 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 433
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 152 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 211
Query: 434 LKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPSLKESAELEIA 485
LK +QP V+ PE++ ++H D ++S Y E + +P + ++EI
Sbjct: 212 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIM 270
Query: 486 ADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDP 543
++A +K +++ + L KH L P P S + R + PD
Sbjct: 271 PELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD- 328
Query: 544 ENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 584
++ K ++GS VE+ + E +KV+D K I
Sbjct: 329 ----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 367
>gi|268555430|ref|XP_002635704.1| Hypothetical protein CBG22443 [Caenorhabditis briggsae]
Length = 644
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 219/501 (43%), Gaps = 61/501 (12%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
+GLPF T GFS KIY TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 97 NFIGLPFYTENTGFSGKIYATEIAFQYGKLLMEEM----LEFMERIEARPDDA-TWKKEE 151
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
+ P+A + A + C++KV TL F + + + S
Sbjct: 152 ICQKFPNAPSMNPMT------WASFYKAADMHRCLTKVITLSFNQTIELFRVKVT-PIVS 204
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G G+ NWI I Y++ SN S D + ++ L SD+ L
Sbjct: 205 GHTYGSANWIFETENEKIGYLTASNPIST-----DVKPMEIGPL--RSDIDYL------- 250
Query: 222 QSSFSDDNNNWEELMNSLSNY-DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
++NS+S D S + M + D +K GSV++PI VG
Sbjct: 251 -------------IINSMSRLIDTSTQTMG--VSLTRTVTDYLKNHGSVILPICPVGPIF 295
Query: 281 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
+++E I+ + + S PIY+IS VA+ +A + EW+ + RQ+ ++ + + H
Sbjct: 296 EMIEAISDIISSTTGISPDTPIYLISPVAKSAIAMASISAEWMSESRQKAVYLPEEPYYH 355
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 396
+ IK ++ ++ +++ ++ PC++ + H SLR+G H++ D N++++
Sbjct: 356 SQFIKSGRLRIYESLYG-NFSKEFKTPCVILASHPSLRVGDAAHMIEVLGSDPKNAVIIT 414
Query: 397 ENEVDAELAVLPFKPISMKVL------QCSFLS-GKKLQKVQPLLKILQPKLVLFPEEWR 449
++++ E PF+ + +K + + F + K LQ+ +P ++ P P R
Sbjct: 415 DSDLPCEEVREPFRNLPIKFINIPMDFRMDFATLDKNLQEWKPKASVICPSAYSQPVLNR 474
Query: 450 THVSFSDVTSFSVSHYSENETIHIPSL----KESAELEIAADIASKFQWRMLKQKKLNIT 505
+ + + + NET+ + + ++ + + D+ +++ KKL I
Sbjct: 475 PDLKITYENLWPIKF---NETVKLWKMTRDQTKTVTVSVHPDVVRDLRFKQHPTKKLAIA 531
Query: 506 RLKGRLFVNHGKHQLLPENEP 526
+ L + +L+P N P
Sbjct: 532 SVACNLSAYNDDFKLVPSNYP 552
>gi|17559896|ref|NP_504953.1| Protein F19F10.12 [Caenorhabditis elegans]
gi|373219402|emb|CCD67763.1| Protein F19F10.12 [Caenorhabditis elegans]
Length = 646
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 177/416 (42%), Gaps = 66/416 (15%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
+GLPF T GFS KIY+TE A + G+L+MEE++ +F E P KW+
Sbjct: 100 SFVGLPFYTEGSGFSGKIYVTEIAYQYGKLLMEEML-------EFISRIEVL-PSDKKWK 151
Query: 102 ELELL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN 151
E P R D + C++KV TL F +
Sbjct: 152 REEFCGKFPNPPFQNPVEWRPYYTTTD-------------MHSCLAKVITLSFNQTIDLF 198
Query: 152 GILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDL 211
I + S G G+ W I AY+S SN ++ + ++ D IL + L
Sbjct: 199 RIKVTPVVS-GHTYGSAYWTIKTENEQFAYLSASNPSATDVKLMETAPLRAVDHILVTSL 257
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
S L D + +EM + D +K GSVL+
Sbjct: 258 SRL---------------------------VDTTAKEMG--YSLIKTITDVLKKHGSVLL 288
Query: 272 PINRVGVFLQLLEQIAIFMECSS---LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
PI VG +++E ++ + ++ L PIY IS VA+ +A + EW+ + RQ +
Sbjct: 289 PICPVGPIFEMIEAVSDIITTTNGIPLDTPIYFISPVAKSAIAMASISAEWMSESRQNAV 348
Query: 329 FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 388
+ + ++H LIK ++ ++ +++ ++ PC++F+ H SLR+G H++
Sbjct: 349 YLPEEPYSHSNLIKSGRVKIYDSLYG-SFSKEFKTPCVIFASHASLRIGDAAHMVEVLGS 407
Query: 389 D-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
D N+++V + ++ E PF+ + +K + ++ LL +PK VL
Sbjct: 408 DPKNAVIVTDPDLPCEDVREPFRNLPIKFINIPMDFRMDFASLERLLADAKPKYVL 463
>gi|341901353|gb|EGT57288.1| hypothetical protein CAEBREN_20924 [Caenorhabditis brenneri]
Length = 648
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 48/407 (11%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
LGLPF T F+ KIY+TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 100 SFLGLPFYTERSDFTGKIYVTEIAYQYGKLLMEEM----LEFMERIEARTEVN-NWKKEE 154
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
P+ + + + C++KV TL F + I I S
Sbjct: 155 ICGKFPNPPFQNPMEWKPFYTA------QEMHSCLTKVVTLSFNQTIDLFRIKIT-PIVS 207
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G G+ W + IAY+S SN + + ++ D IL + LS L
Sbjct: 208 GHSYGSAYWTLKTENEKIAYLSASNQNALDVKPMEIDPLRNVDYILATSLSRL------- 260
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEM-EKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
D +V+ M +L S + +K+ GSVL+P+ VG
Sbjct: 261 --------------------VDTTVQAMGHRLIKEIS---EVLKSHGSVLLPMCPVGPIF 297
Query: 281 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
+L+E ++ + + SL PIY IS +A+ +A+ + EW+ + R ++ + F+H
Sbjct: 298 ELIEAVSDLITSTNGISLDTPIYFISPMAKSAIAFASISAEWMAESRHNTVYVPEEPFSH 357
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 396
LI+ ++ ++ +++ ++ PC++F+ H SLR+G H++ D N+++V
Sbjct: 358 NHLIRSGRLKIYDSLYG-NFSKEFKTPCVIFASHASLRVGDAAHMVEVLGSDPKNAVIVT 416
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
+ ++ E PF+ + +K L ++ LL ++PK VL
Sbjct: 417 DPDLPCEDVREPFRTLPIKFLNIPMDFRMDFGSMERLLADVKPKYVL 463
>gi|341887733|gb|EGT43668.1| hypothetical protein CAEBREN_15431 [Caenorhabditis brenneri]
Length = 601
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 48/407 (11%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
LGLPF T F+ KIY+TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 53 SFLGLPFYTERSDFTGKIYVTEIAYQYGKLLMEEM----LEFMERIEARTEVN-NWKKEE 107
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
P+ + + + C++KV TL F + I I S
Sbjct: 108 ICGKFPNPPFQNPMEWKPFYTA------QEMHSCLTKVVTLSFNQTIDLFRIKIT-PIVS 160
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G G+ W + IAY+S SN + + ++ D IL + LS L
Sbjct: 161 GHSYGSAYWTLKTENEKIAYLSASNQNALDVKPMEIDPLRNVDYILATSLSRL------- 213
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEM-EKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
D +V+ M +L S + +K+ GSVL+P+ VG
Sbjct: 214 --------------------VDTTVQAMGHRLIKEIS---EVLKSHGSVLLPMCPVGPIF 250
Query: 281 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
+L+E ++ + + SL PIY IS +A+ +A+ + EW+ + R ++ + F+H
Sbjct: 251 ELIEAVSDLITSTNGISLDTPIYFISPMAKSAIAFASISAEWMAESRHNTVYVPEEPFSH 310
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 396
LI+ ++ ++ +++ ++ PC++F+ H SLR+G H++ D N+++V
Sbjct: 311 NHLIRSGRLKIYDSLYG-NFSKEFKTPCVIFASHASLRVGDAAHMVEVLGSDPKNAVIVT 369
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
+ ++ E PF+ + +K L ++ LL ++PK VL
Sbjct: 370 DPDLPCEDVREPFRTLPIKFLNIPMDFRMDFGSMERLLADVKPKYVL 416
>gi|290984007|ref|XP_002674719.1| hypothetical protein NAEGRDRAFT_80530 [Naegleria gruberi]
gi|284088311|gb|EFC41975.1| hypothetical protein NAEGRDRAFT_80530 [Naegleria gruberi]
Length = 786
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 215/486 (44%), Gaps = 87/486 (17%)
Query: 23 FIKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAK-----------IYITEAAARIGQ 70
F K+ A +I LIL T +P +L LPFL + AK IY TE ++G+
Sbjct: 93 FHKIDASQIDLILIT--NPHNLLALPFLYQHLKEIAKDQNSDKVKMPTIYATEPTVQLGK 150
Query: 71 LMMEELICMNMEYRQFYGAEESSGPQWMKWEEL----ELLPSALRKIALGEDGSELGGGC 126
MM+ELI +Q E S Q K EE +L P K D
Sbjct: 151 KMMQELIAY---VKQSEHLELSRASQIFKPEENIFMNKLSPLLSEKFIYSNDD------- 200
Query: 127 PCIAHVKDCISKVQTLRFGEE-ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185
V + ++++ + E A + G+ I A SSG +G CNW+I I Y+S S
Sbjct: 201 -----VLRVVESMKSVSYQERVAVFGGVFEISALSSGYSLGYCNWLIRTEYEKIFYVSHS 255
Query: 186 NFASG----HAMDFDYRAI----------QGSDLILYSDLS-SLDSTEDIDQSSFSDDNN 230
+ SG H + D + G+ + S +S S+ +T I + +
Sbjct: 256 S-RSGVQVRHPAEMDLSTVTSIVQAPGSSSGTVATIQSGVSGSMVNTVMIVSNICPKSDR 314
Query: 231 N-------WEELMNSLSNYDES------VEEME------------KLAFICSCAIDSVKA 265
N +++L ++L +S E ++ L IC ++++
Sbjct: 315 NLQYFEQVYQQLASTLGPISKSQLYAIDTENIKIVKPLCHYYPEATLNDICRIIGKTIES 374
Query: 266 GGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQR 324
GG VLIP + G+ L++ ++ F L IY++S VA+ + Y N EWLC +
Sbjct: 375 GGDVLIPCHTTGLIYDLIDFLSTFFNSVHLGNTLIYLVSPVADHAIQYANISAEWLCDSK 434
Query: 325 QEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ-----EPCIVFSPHWSLRLGPT 379
+K + + FAHV L++ K + VF +V+S K + +Q PC++F+ H SLR+G
Sbjct: 435 MDKTLTAESPFAHVNLLQNKSLVVFDSVNS-KFMSYYQSHRVSNPCVIFAGHPSLRMGDI 493
Query: 380 IHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPI----SMKVLQCSFLSGKKLQKVQPLL 434
+ L+ + + +N+++++E E + PF P SMK + C K V ++
Sbjct: 494 LQLIPIFQRNSNNAMIMIEPEYSFLDTIEPFLPPPGQQSMKFIHCPIDLRLKNSDVVHMV 553
Query: 435 KILQPK 440
K + P+
Sbjct: 554 KQVAPQ 559
>gi|308507445|ref|XP_003115906.1| hypothetical protein CRE_09329 [Caenorhabditis remanei]
gi|308250850|gb|EFO94802.1| hypothetical protein CRE_09329 [Caenorhabditis remanei]
Length = 421
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 163/365 (44%), Gaps = 66/365 (18%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
GLPF T GFS KIY+TE A + G+L+MEEL +E+ + A P+ KW++ E
Sbjct: 103 GLPFYTENTGFSGKIYVTEIAFQYGKLLMEEL----LEFMERIEAR----PEDKKWKKEE 154
Query: 105 LL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 154
+ P+ R ED + C++KV TL F + I
Sbjct: 155 VCGKFSNPPFQNPAEWRPFYTTED-------------MHRCLTKVITLSFNQTIDIFRIK 201
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 214
I S G G+ W NIAY++ SN + + ++ D IL + LS L
Sbjct: 202 ITPVVS-GHTYGSAYWTFKTENENIAYLTASNPNATDVKLMEIAPLRSVDYILVTSLSRL 260
Query: 215 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 274
D +V+ M + + +K GSV++P+
Sbjct: 261 ---------------------------IDTTVQAMG--VGLTRTITEVLKNHGSVILPMC 291
Query: 275 RVGVFLQLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 331
+G +L+E ++ + + S+ PIY IS VA+ +A + EW+ + RQ ++
Sbjct: 292 PIGPIFELVEAVSDVISATPGISMDTPIYFISPVAKSAIAMASISAEWMSESRQNAVYLP 351
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-H 390
+ ++H +LI+ ++ ++ +++ ++ PCI+F+ H SLR+G H++ D
Sbjct: 352 EEPYSHNQLIRSGRLKIYDSLYG-NFSKEFRTPCIIFASHASLRVGDAAHMVEILGSDPR 410
Query: 391 NSLLV 395
N+++V
Sbjct: 411 NAVIV 415
>gi|428182657|gb|EKX51517.1| hypothetical protein GUITHDRAFT_161545 [Guillardia theta CCMP2712]
Length = 650
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 159/382 (41%), Gaps = 56/382 (14%)
Query: 43 MLGLPFLTRMEG-FSAKIYITEAAARIGQLMMEELI-CMNMEYRQFYGAEESSGPQWMKW 100
MLGLP+ T F + TE A IG+LMM EL ++ G E +W K
Sbjct: 107 MLGLPYFTEGSAKFQGTVIATEPTAEIGKLMMMELTQYISTSSFGSSGMSEGGEGEWYK- 165
Query: 101 EELELLPSALRKIALGEDGSELGGGC-PCIAH-VKDCISKVQTLRFGEEACYNGILIIKA 158
G E+G G P A V+ C+S+V+ L FG+ + I
Sbjct: 166 ---------------GPGSVEMGPGRDPYTAQQVESCMSRVKRLNFGQSLALSEGYAITP 210
Query: 159 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 218
+ SG +G+ W++S + +A I +M F R DS
Sbjct: 211 YPSGYCLGSSFWLLSKPQCKVALIGAC------SMGFPLRT---------PLPPRFDSLR 255
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
+++ + F D + + + + + I ++++ GG+VL+PI G
Sbjct: 256 NVNVAIFGDLLPSDRLVTPAGMSVTQPPPPAWPFRDIGQAIQNTLQKGGNVLMPITLGGT 315
Query: 279 FLQLLEQIAIF---MECSSLKIPIYIISSVAEELLAYTNTIPEWLCK---QRQEKLFSGD 332
L LLE ++++ S + PIY+IS A L+ Y + EW+ R+E+ D
Sbjct: 316 SLDLLEALSMWCPDFGVSGMNAPIYLISPTANSLIGYLEILSEWVQTFDATRREREGRID 375
Query: 333 PLFAHVKLIKEKKIHVFPAVHSPKLLM---------------NWQEPCIVFSPHWSLRLG 377
F H +++ ++H+ VH + ++EPC+V + H SLR G
Sbjct: 376 SPFVHQSMLQNSRLHIISDVHDLRSSSSSTTTTNMPTQPPTSTYREPCLVLAGHPSLRFG 435
Query: 378 PTIHLLRRWSGDHNSLLVLENE 399
P +H L+RW + L+L +
Sbjct: 436 PCLHFLKRWGQKAENALILTDN 457
>gi|168047035|ref|XP_001775977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672635|gb|EDQ59169.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 39 SPMGMLGLPFLTRMEGFSAK---------------------------IYITEAAARIGQL 71
+P MLGLPFLT+ F K ++ T+A A IG++
Sbjct: 175 NPSSMLGLPFLTKHPDFCGKARINYPFVLNYMSLLELSKNSTRAEDSVFATKATAEIGRM 234
Query: 72 MMEELICMNMEYRQFYGA-EESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIA 130
MMEEL+ M+ ++ Q +G + P W+ L LP +R +L S P +
Sbjct: 235 MMEELVSMHADFIQGHGTVKNGQKPPWLHPSVLSSLPENMRGTSLDRCFSNRANWQPLYS 294
Query: 131 H--VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 188
+K+C VQ + FGEE +NG+ I SSG+ IGA NWIISGA + Y++ S
Sbjct: 295 KDDIKNCFDHVQKMSFGEEINFNGVFKISPSSSGMGIGASNWIISGAIHRVGYVAASLAM 354
Query: 189 SGHAMDFDYRAIQGSDLILYSDL 211
HAM D ++G ++ SD+
Sbjct: 355 KNHAMPLDIAPLEGCHALIISDV 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELL 310
+A C I+++K GGSVL PI G+FL+LLE++ + ++LK IPI+ IS AEE+L
Sbjct: 496 VAAACKWTIEAIKRGGSVLFPIGPSGLFLELLEELGTQLGAANLKHIPIHYISPAAEEML 555
Query: 311 AYTNTIPEWLCKQRQEK 327
AY NT+PEWLC RQEK
Sbjct: 556 AYCNTVPEWLCSARQEK 572
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD 456
+ E D +L + P+ P++M+VL+ S + ++V +L+ +QP++ L PE + + +
Sbjct: 572 KKESDMDLLLAPYMPLAMQVLELPTSSRLRSKEVASVLQSVQPQVALVPEFIQKSLEGAR 631
Query: 457 VTSFSVS-HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
++ V Y +I +P+ + E++++A++A Q + +K K + +
Sbjct: 632 SSNTKVILGYKNGRSIPVPNFEIELEVDMSAELALLVQPKPVKSKNVAAAPFQAGFCSRD 691
Query: 516 GKHQL-LPENEPGGSSQTRPFLH-WGSPDPENLLAELSKMGIN----GSVERCMTDAESE 569
G H L +P + + + + WG + L L + G++ ++ +T E
Sbjct: 692 GIHSLQIPTSSSNLVMSSHEYHYRWGQVNVGALSRALQERGMSEVSFHELDESLTGREGP 751
Query: 570 DG----FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENIL 612
G V+++ P ++ IE+ + I A + +L I A+ ++L
Sbjct: 752 VGEHKPLMVEIRSPSRAWIELGPNSSHIKANEPSLRHLIADAVNSVL 798
>gi|339232886|ref|XP_003381560.1| integrator complex subunit 9 [Trichinella spiralis]
gi|316979622|gb|EFV62386.1| integrator complex subunit 9 [Trichinella spiralis]
Length = 961
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 193/512 (37%), Gaps = 92/512 (17%)
Query: 23 FIKLYARKILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNME 82
F + A I+++ S L LPF+T F +Y TE + +M +++
Sbjct: 105 FTDVNAADIILVSNFNS---ALALPFITERSEFQGTVYATEPTVEFARCLMLDMVTYFER 161
Query: 83 YRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTL 142
+ + +S P + +E++E +C+SKV +
Sbjct: 162 AKSATHRKLTSAP-FYTFEDVE-----------------------------NCLSKVNIV 191
Query: 143 RFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG 202
+ E G + +SGL IG CNWI+ Y+S S HA
Sbjct: 192 NYNETVICPGFGHLIPTASGLSIGGCNWIV--------YLSSFTCVSTHAKAMAVDKFDN 243
Query: 203 SDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDS 262
+ I+ L N N + DE C+ ++
Sbjct: 244 ATAIVVGSL-------------------NQYPKKNPATVMDE----------FCTVVANT 274
Query: 263 VKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
+ GG+VLIP + GV L+E + A + S L + IS A+ A+ N EWL
Sbjct: 275 IATGGNVLIPSSPCGVTFDLIEYLFARVLSRSPLPNCQVIFISETADTCFAFGNICGEWL 334
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNW----------QEPCIVFSP 370
C ++ ++F F H K + +W + P IVF+
Sbjct: 335 CDSKKCRVFQPQEPFVHGSFFFLKSCKLMSRFACISTACSWWTCETDEINKRSPYIVFAS 394
Query: 371 HWSLRLGPTIH-LLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 429
H SLR+G + LL + N++++ + E + P+KPISMKV C +
Sbjct: 395 HPSLRVGDAVQFLLLMKDNEKNTIILTDPEFSPNEVLFPYKPISMKVAFCPIDVRMNTVE 454
Query: 430 VQPLLKILQPKLVLFP-EEWRTHVSFSDVTSFSV-------SHYSENETIHIPSLKESAE 481
LL LQPK + P +E T +F + + V +YS + IP +
Sbjct: 455 AVSLLSSLQPKALCLPIQEKNTVENFCNTSEIVVRFRRSNTRYYSTSNICPIPPDHRLVK 514
Query: 482 LEIAADIASKFQWRMLKQKKLNITRLKGRLFV 513
+++ +AS L K +I R+ GRL +
Sbjct: 515 IKLDPKLASAVTLIDLGCGK-SIGRVAGRLIL 545
>gi|348690830|gb|EGZ30644.1| hypothetical protein PHYSODRAFT_263811 [Phytophthora sojae]
Length = 620
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 178/438 (40%), Gaps = 65/438 (14%)
Query: 54 GFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKI 113
GF +IY T+ G++ +EEL + E E EL +L++I
Sbjct: 84 GFKGQIYATQLTLDFGRVFLEELAALTQGDDSAVFVFEGVAVGM----ETELPMHSLKEI 139
Query: 114 ALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 173
+ C KV+ + + E + + A SSG +GA W+I
Sbjct: 140 -------------------EQCCKKVRCVEYSEVVSLAYGVQVTALSSGHSLGASIWLIE 180
Query: 174 GAKGNIAYISGSNFASG----HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDN 229
G +AY++ ASG H + D + + +L +DL D+ S+
Sbjct: 181 GPNDRLAYVAA---ASGDYNRHPKELDLMPLVDCETLLLTDLKP-------DRDPHSNTE 230
Query: 230 NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIF 289
E +++ ++ E GG ++P + GV L+E A++
Sbjct: 231 RMVEHVLSGVTRVLER--------------------GGVCIVPTSPCGVVFDLVE--AVY 268
Query: 290 MEC--SSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 347
C + +P+Y IS A ++ T EWLC+++ EKL++G+ F H L+K H
Sbjct: 269 AACLHNKQNVPMYFISDHASRVMELTQLGAEWLCEKKIEKLYAGEDAFLHESLLKNGLFH 328
Query: 348 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAV 406
V S +Q I+F+ H SL+ G L+R + N++L+++ VDA A
Sbjct: 329 AVADV-SAATAATFQNGSIIFAGHPSLKFGRAPELIRMLGNESRNAVLLIDPAVDATEAF 387
Query: 407 LPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSV-SHY 465
PF+ ++++ + C + P ++ P E+ S S + SH+
Sbjct: 388 APFQDLNIEKIACPIDPRLSCGDANQFIARCCPHNLIVPYEYTIAPSASAAEGAEMSSHF 447
Query: 466 SENETIH-IPSLKESAEL 482
S +H + + K EL
Sbjct: 448 SRVLPLHELTAAKTKTEL 465
>gi|325186610|emb|CCA21159.1| integrator complex subunit putative [Albugo laibachii Nc14]
Length = 650
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 186/455 (40%), Gaps = 72/455 (15%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL-------ICMNMEYRQFYGAEESSGP 95
+L L LT GF IY+TE + G++M++E+ + ++ E Q E +G
Sbjct: 41 ILNLAVLTTHFGFQGDIYMTEMTFKTGRVMVDEILHLVDTGVDVSFEVSQ---PLEVAGG 97
Query: 96 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILI 155
+ + AL +I+ + V D KV+++ F E L
Sbjct: 98 ELCTLNPFQANTGALYRISRND--------------VDDAYRKVRSVGFCEVIRLPYGLQ 143
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG-HAMDFDYRAIQGSDLILYSDLSSL 214
I A SSGL +G+C W IS A + YI ++ S HA D +I +D IL +DL
Sbjct: 144 ITALSSGLSMGSCLWTISDANEKLTYIPAASADSNRHAKKIDIASIGKTDAILLTDLR-- 201
Query: 215 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 274
+++ + E L+N +S + G+ LI
Sbjct: 202 -----VNRDPLTTTEKMMETLLNHVSRI--------------------LDQRGTALILTP 236
Query: 275 RVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 334
+ L+E I + I +SS AE+ + TN +WLC++R +KLF+G+
Sbjct: 237 PCTINFDLIETIYALLYRKQQSTSIVYLSSCAEQFMELTNAGADWLCEKRIDKLFAGEDP 296
Query: 335 FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH--NS 392
F L K+K +H ++ + L +VF+ + SL G L + + DH N+
Sbjct: 297 FLISVLKKKKILHPLSSITTAA-LTELNNGGVVFATYASLHSGNGAILFKSLA-DHERNA 354
Query: 393 LLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHV 452
LL+++ D + + F M++++C LL P+ ++ PEE+ +
Sbjct: 355 LLLIDPSEDHQAPL--FSNTKMEIIRCPIDPRLNCGDANQLLACCCPESLIVPEEYTLNT 412
Query: 453 --------------SFSDVTSFSVSHYSENETIHI 473
S SD +S +S +H+
Sbjct: 413 TAESDDMSNRNNEGSISDANDQEISRFSRVLPLHL 447
>gi|301119461|ref|XP_002907458.1| integrator complex subunit, putative [Phytophthora infestans T30-4]
gi|262105970|gb|EEY64022.1| integrator complex subunit, putative [Phytophthora infestans T30-4]
Length = 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 59/380 (15%)
Query: 43 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 102
+L LP LT + GF +IY T+ G++ ++EL ++ E+S+ +E
Sbjct: 73 LLALPLLTEIFGFKGEIYATQLTLDFGRVFLKELAALSQ-------GEDSA---IFTFE- 121
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
+ +D + ++ C K++ + + E + I A SSG
Sbjct: 122 -----------GVADDIPMFS-----VEEIEKCCRKIRCVEYSEVVSLAYGVQITALSSG 165
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+GA W++ G +AY++ ASG DF+ R + DL+ D +L T D
Sbjct: 166 FSLGASIWLVEGPNDKLAYVAA---ASG---DFN-RHPKELDLLPLVDCETLLLT---DL 215
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
D + N E ++ + S ++ GG ++P + GV L
Sbjct: 216 KPDRDPHANTERMVER----------------VLSGVTRVLERGGVCIMPTSPCGVVFDL 259
Query: 283 LEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
+E A++ C K +P+Y IS A ++ T EWLC+++ +KL++G+ F H L
Sbjct: 260 VE--AVYAACVHNKQNVPMYFISDHAARVMELTQLGAEWLCEKKIDKLYAGEDAFLHESL 317
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 399
+K H V S + +Q I+F H SL+ G L++ + N++L+++
Sbjct: 318 LKNNVFHAVTDV-SAATAVTFQNGSILFVSHPSLKFGRAPELIQMLGNESRNAVLLIDPS 376
Query: 400 VDAELAVLPFKPISMKVLQC 419
VD A PF+ + ++ + C
Sbjct: 377 VDDTEAFAPFQDLPIEKISC 396
>gi|313212744|emb|CBY36674.1| unnamed protein product [Oikopleura dioica]
Length = 519
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 179/418 (42%), Gaps = 51/418 (12%)
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 190
V C S V+T+ +GE GI + A SSG IG+CNW+I IAYI
Sbjct: 143 QVDACFSYVKTINYGEPIDLFGIASVIAHSSGFCIGSCNWMIEIYDKKIAYICDHTSLKT 202
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
HA D +A++ SD+++ + L S FS D SV +
Sbjct: 203 HASRVDTKALKDSDILILNGLKSC--------PGFSP---------------DRSVNDA- 238
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ-IAIFMECSSLKIPIYIISSVAEEL 309
C+ ++VK GGSV+ P+ GV L LLE I + IP Y IS +A+
Sbjct: 239 -----CATLDETVKWGGSVMFPVYPTGVMLDLLEIFIDYLAQMGRGHIPFYFISPIAKAA 293
Query: 310 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 369
LA+ PE L + +QEK F H I++ K+ ++ + L ++ P + F
Sbjct: 294 LAHAQIYPEALSEAKQEKASLPQFPFDHDLAIEKGKLKIYEDTNE-GLSAIFRGPAVFFG 352
Query: 370 PHWSLRLGPTIHLLRRWSGD-HNSLLVLE----NEVDAELAVLPFKPISMKVLQCSFLSG 424
H S+ LG L + W+ + N +V E N A + P+ ++ +G
Sbjct: 353 GHPSMELGLARKLGKDWANNPKNKFIVTECGFQNNTFAGRLNVKHAPVDTRMTT----TG 408
Query: 425 KKLQKVQPLLKILQPK-LVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 483
KL +++ L+PK LV+ TH + + + +T S K +++
Sbjct: 409 AKL-----MVQELKPKELVICQAILHTHPKLRE-SVIPPRIFHPGKTHDFSSFKTYRDVK 462
Query: 484 IAADIASKFQWRMLKQK-KLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGS 540
+ ASK R + + + + G L +++G+ + + E G+S L WG+
Sbjct: 463 MDVSAASKVTLRPTPGRPDVCVGPISGTLNISNGQFRFTTDYE--GTSNIEQKL-WGA 517
>gi|313234387|emb|CBY24586.1| unnamed protein product [Oikopleura dioica]
Length = 579
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 183/428 (42%), Gaps = 51/428 (11%)
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 190
V C S V+T+ +GE GI + A SSG IG+CNW+I IAYI
Sbjct: 143 QVDACFSYVKTINYGEPIDLFGIASVIAHSSGFCIGSCNWMIEIYDKKIAYICDHTSLKT 202
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
HA D +A++ SD+++ + L S FS D SV +
Sbjct: 203 HASRVDTKALKDSDILILNGLKSC--------PGFSP---------------DRSVNDA- 238
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ-IAIFMECSSLKIPIYIISSVAEEL 309
C+ ++VK GGSV+ P+ GV L LLE I + IP Y IS +A+
Sbjct: 239 -----CATLDETVKRGGSVMFPVYPTGVMLDLLEIFIDYLAQMGRGHIPFYFISPIAKAA 293
Query: 310 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 369
LA+ PE L + ++EK F H I++ K+ ++ + L ++ P + F
Sbjct: 294 LAHAQIYPEALSEAKKEKASLPQFPFDHDLAIEKGKLKIYEDTNE-GLSAIFRGPAVFFG 352
Query: 370 PHWSLRLGPTIHLLRRWSGD-HNSLLVLE----NEVDAELAVLPFKPISMKVLQCSFLSG 424
H S+ LG L + W+ + N +V E N A + P+ ++ +G
Sbjct: 353 GHPSMELGLARKLGKDWANNPKNKFIVTECGFQNNTFAGRLNVKHAPVDTRMTT----TG 408
Query: 425 KKLQKVQPLLKILQPK-LVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 483
KL +++ L+PK LV+ TH + + + +T S K +++
Sbjct: 409 AKL-----MVQELKPKELVICQAILHTHPKLRE-SVIPPRIFHPGKTHDFSSFKTYRDVK 462
Query: 484 IAADIASKFQWRMLKQK-KLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPD 542
+ ASK + + + + + G L +++G+ + + E G+S L WG+
Sbjct: 463 MDVSAASKVTLQPTPGRPDVCVGPISGTLNISNGQFRFTTDYE--GTSNIEQKL-WGAMT 519
Query: 543 PENLLAEL 550
E L +L
Sbjct: 520 VEGLAKQL 527
>gi|403356179|gb|EJY77680.1| hypothetical protein OXYTRI_00685 [Oxytricha trifallax]
Length = 822
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 200/434 (46%), Gaps = 68/434 (15%)
Query: 43 MLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYRQF--YGAEESS---G 94
+ GLPF+TR++ F K+++T +IGQ ++ EL+ +N + Q G +S G
Sbjct: 172 LYGLPFITRLQEQKKFKGKVFMTVPVGQIGQHLLNELVILNDQRNQTKQKGQGDSGSDFG 231
Query: 95 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISK-VQTLRFGEEACYNGI 153
+ K E+++ + + L G E A + +C + V L + E ++ +
Sbjct: 232 GSYFKQEKMKGIFAKL--------GIEEWQNLYTQADIDECFEQHVTLLNYNESYTFDNL 283
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDL 211
+ I SSG+ IG+CNWI++ + I +S S+ + + F+ A+Q DL+L +
Sbjct: 284 IKITPLSSGMHIGSCNWILNVGQQKIGLLSNSSEEGDFRYPLYFNAEALQDLDLLLVGSV 343
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
++ +QS+F W++ S S Y EKL S + +S V++
Sbjct: 344 VK----QNAEQSNF------WQQ---SKSFY-------EKLNMCLSQSPNS-----KVIL 378
Query: 272 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 331
P+ + +I + I IS A +L+ Y+N E+L ++ Q K+ S
Sbjct: 379 PVQSPFIL-----EIVDLLIHKITHARIIFISESANQLIQYSNINVEYLNQKLQTKILSS 433
Query: 332 DPLFAHVKLIKEKKIHVFPAV-----HSPKLLMNW-------QEPCIVFSPHWSLRLGPT 379
+ F+ KL KE+++ VF + + + M QE I SP+ LR+G
Sbjct: 434 ENPFSFDKLFKEERLFVFKNIKEYLEYKKEKAMGMAVIDEFCQELIITTSPN--LRIGEA 491
Query: 380 I---HLLRRWSGDHNSLLVLENEV-DAELAVLPFKPI-SMKVLQCSFLSGKKLQKVQPLL 434
+ H L ++ N +++ + + + +L + PF + +++VL Q++ L+
Sbjct: 492 VYWLHHLNKYQPSQNFMILTDPQYCNNDLLMKPFAKVNNIRVLHSPIDLNLSFQQLNNLV 551
Query: 435 KILQPKLVLFPEEW 448
L+PK V+ P ++
Sbjct: 552 NRLKPKRVICPRDY 565
>gi|395507652|ref|XP_003758136.1| PREDICTED: integrator complex subunit 9 [Sarcophilus harrisii]
Length = 410
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 104 ELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + SS
Sbjct: 70 RLLPAPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSS 123
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 124 GYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT----- 178
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+N D V E CS +V+ GG+VLIP GV
Sbjct: 179 ------------------ANPDGMVGEF------CSNLALTVRNGGNVLIPCYPSGVIYD 214
Query: 282 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
LLE + +++ + L +P Y IS VA L + EWLC +Q K++ +P F H +L
Sbjct: 215 LLECLYQYIDSAGLSNVPFYFISPVANSSLEFAQIFAEWLCHNKQTKVYLPEPPFPHAEL 274
>gi|449670628|ref|XP_004207309.1| PREDICTED: integrator complex subunit 9-like, partial [Hydra
magnipapillata]
Length = 272
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 44/281 (15%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
+L LP++T GF+ K++ TE G+L MEEL+ N + Q + W +
Sbjct: 32 NILALPYVTEYSGFNGKVFATEPTLHFGRLYMEELVSYNESFLQ-----KKKFTLWKNKD 86
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDC---ISKVQTLRFGEEACYNGILIIKA 158
+ LPS L D G I + +D ISK+Q + F E G++ + A
Sbjct: 87 IQKFLPSPLCDF---HDAVTWEG----IYNARDVSSSISKIQCVGFSERIDVLGLIRVTA 139
Query: 159 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 218
SSG IG+ NWI+ I YIS S+ + H++ + A++ SDL + L+SL T
Sbjct: 140 VSSGYAIGSSNWILETDYHKICYISSSSTYATHSLPMEQNALKNSDLCI---LNSLTPTS 196
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
++ + D ++L N C +++ ++L GV
Sbjct: 197 IVNPDAMLRD------FCSNLGNI---------------CYLENQFKRSTILTK----GV 231
Query: 279 FLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPE 318
L E + FM+ S L IPIY IS VA+ LAY N E
Sbjct: 232 IFDLFEYLCAFMDGSGLSFIPIYFISPVADSSLAYANIYAE 272
>gi|449674758|ref|XP_004208251.1| PREDICTED: integrator complex subunit 9 homolog [Hydra
magnipapillata]
Length = 304
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L +Q K++ +P F H +L+K +I + +HS L + + P IVF+ H SLR G
Sbjct: 9 LNTNKQAKVYLPEPPFLHHELVKNGRIKHYENLHS-GLSSSLKTPSIVFTGHPSLRFGDV 67
Query: 380 IHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQ 438
+H L W + N+++ +++E A+ P++P+SMK + C + LL+ ++
Sbjct: 68 VHFLNLWGHESGNTVIFIDSEFPYLEALTPYQPLSMKAVFCPIDPRLNFHQSNKLLRDIK 127
Query: 439 PKLVLFPEEWRT-------HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASK 491
P LV+ PE ++T + T V + + I IP K A++ ++ ++A
Sbjct: 128 PGLVVIPEAYQTPPALMPQRTDLTINTDIPVRAFQYMDVIDIPLHKTFAKVTLSPEVAKS 187
Query: 492 FQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELS 551
+ + + L I ++ ++ +H L P + S+ L +GS D ++ L
Sbjct: 188 LCPKQI-EDGLAIASVRAKVVTRDNRHTLKPVDLDNEISKVGKQL-FGSIDVNQFISALK 245
Query: 552 KMGINGS 558
GIN +
Sbjct: 246 MQGINNA 252
>gi|256078142|ref|XP_002575356.1| hypothetical protein [Schistosoma mansoni]
gi|353232819|emb|CCD80175.1| hypothetical protein Smp_143920 [Schistosoma mansoni]
Length = 910
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 58/318 (18%)
Query: 31 ILILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAE 90
++++ RS +LGLPFL F K++ TE + G++++++L+C E Q + +E
Sbjct: 106 VILVSNTRS---ILGLPFLFENTNFRGKVFATEPVVKFGKILIDDLLC---ELDQLFESE 159
Query: 91 ESSGPQWMKWEELELLPSALRKIALGEDGSELG-GGCPCIAHVKDCISKVQTLRFGEEAC 149
+S +K ++L I + E V + + + + E
Sbjct: 160 VNSDLSKVKVDKLN------NPIGYLLNSDEFNWTKFYTRESVIKALDNIHLVAYHEPVD 213
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
G+L IK S+G IG+CNWII+ S FD + +D+++
Sbjct: 214 LFGLLTIKGLSAGYGIGSCNWIIT---------------SSTEKPFDDSTFEDTDVLIIG 258
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
++ S E +++VEE C + ++ GG+V
Sbjct: 259 TVNMYASDE-----------------------LEKTVEEF------CHIVVQTLAHGGNV 289
Query: 270 LIPINRVGVFLQLLEQ-IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
L+P N G+ LLE I + + PI+ IS+ LAY+N EWL ++ L
Sbjct: 290 LVPSNPSGIIFDLLETAIQAKDNFNVARSPIFFISNQVHVSLAYSNAYGEWLNSVKESVL 349
Query: 329 FSGDPLFAHVKLIKEKKI 346
++ D F L++ K+
Sbjct: 350 YNADAPFIFQSLLQCGKL 367
>gi|170578951|ref|XP_001894613.1| hypothetical protein [Brugia malayi]
gi|158598704|gb|EDP36544.1| conserved hypothetical protein [Brugia malayi]
Length = 545
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 295 LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHS 354
+ +P+Y IS VAE LAY+N EWL +++Q + + F H + ++ V+ ++
Sbjct: 245 VDVPVYFISPVAESTLAYSNIYVEWLSEKKQSMVNIPEEPFKHGLTSRNGRLKVYDNIYG 304
Query: 355 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPIS 413
+ PC++F+ H SLR+G +H L W D N+L++ + + + P++ +S
Sbjct: 305 -DFCRQMRTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALIMTDPDYPIQNVYGPYEKLS 363
Query: 414 MKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEW-RTHVSFSDVTSFSVSH-----YS 466
++ + ++ P +L L PKL++ PE + + + S T F V++ +
Sbjct: 364 IRAFFFPIETRLDFSQLNPSILPDLAPKLLVMPEVYTQPPPNSSQRTDFVVAYNARATFR 423
Query: 467 ENETIHIPSLKESAELEIAADIASKFQWR-MLKQKKLNITRLKGRLFVNHGKHQLLPE 523
+T IPS ++ + + D + R + ++ LKG L V +L P+
Sbjct: 424 YGDTFTIPSTAKTKRVRLHPDTLRCIELRGHYDHGDIGLSSLKGILSVYDNILELNPD 481
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M +L LPF T F+ +Y T+ ++G+L+MEEL +++ EE Q W
Sbjct: 70 MSLLALPFFTEETKFTGVVYATDPTLQLGRLVMEEL----LDFFDRVDREE----QDYSW 121
Query: 101 EELELL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
++ L P R E +++C++KVQ + F E
Sbjct: 122 KKPALFMSFPNVPTSDPREWRPFYSRE-------------QMENCLAKVQRVSFRESINI 168
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210
+G + A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++ +
Sbjct: 169 HGAATVAAYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALILTS 228
Query: 211 L 211
+
Sbjct: 229 I 229
>gi|328864962|gb|EGG13348.1| integrator complex subunit 9 [Dictyostelium fasciculatum]
Length = 622
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
++ LP++T F+ KIY TE +IG+L++ EL+ +M Q +S+ Q+ W+
Sbjct: 118 NLISLPYITEHTSFNGKIYATEPTIQIGRLLLLELVQYDMNSNQ-----KSNINQY--WQ 170
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKD---CISKVQTLRFGEEACYNGILIIKA 158
ELL L + G + D C K+Q +R+ E I+A
Sbjct: 171 STELL--KLIGAEQANSAFKHAKGWKTLYSRFDTEKCFEKIQAVRYNEFINLYS-FTIRA 227
Query: 159 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 218
SSG +G+CNW+I I Y+S S+ + D ++IQ D+ +Y+ S ++
Sbjct: 228 TSSGYCLGSCNWVIESMNEKIVYLSDSSVYERYPEPIDLQSIQSPDVFIYA--SKINHPL 285
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
S+ ++ S + Y E++ E+ C +++ GGSVLIP+ G
Sbjct: 286 QQPPSTIGQ-----QQQQQSFNPYMENINEL------FHCIGNTISNGGSVLIPVYSCGT 334
Query: 279 FLQLLE 284
L L E
Sbjct: 335 VLDLFE 340
>gi|402581441|gb|EJW75389.1| hypothetical protein WUBG_13700, partial [Wuchereria bancrofti]
Length = 249
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210
+G + A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++
Sbjct: 74 HGAATVAAYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALI--- 130
Query: 211 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 270
+ S+ + E E A D++K GSVL
Sbjct: 131 -------------------------LTSICRFPEHSPETSVCHAFAVIA-DTLKRNGSVL 164
Query: 271 IPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
+PI G+ LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q +
Sbjct: 165 MPICPTGILYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMV 224
Query: 329 FSGDPLFAH 337
+ F H
Sbjct: 225 NIPEEPFKH 233
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 271 IPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
+PI G+ LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q +
Sbjct: 1 MPICPTGILYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMV 60
Query: 329 FSGDPLFAH 337
+ F H
Sbjct: 61 NIPEEPFKH 69
>gi|384498336|gb|EIE88827.1| hypothetical protein RO3G_13538 [Rhizopus delemar RA 99-880]
Length = 434
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 38/275 (13%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG- 190
++ C+ K+Q +R+ E L + A SSG IG+ NW++ + I ++S S+
Sbjct: 45 IQGCLEKIQPVRYNESLFLFSTLSLVAHSSGYSIGSANWLLETSFKKIVFLSTSSLTPNL 104
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
H FD + +D ++ SD+ S D SF E
Sbjct: 105 HPAPFDQSLLTEADAVIVSDVVEPSS----DHVSF----------------------ERS 138
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--------IPIYII 302
+ + A ++++ +VLI + + LL I + + + +PIY+
Sbjct: 139 RTKLLAHIA-RTIQSNNNVLIAAPSMHIVFDLLGDIESYFKSIGAREIGGENDQVPIYVA 197
Query: 303 SSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL-LMNW 361
+ VA + L Y+N EW+ RQ L+ AH +L+ + + V S +L
Sbjct: 198 NPVANKSLQYSNICGEWMNPDRQCLLYEPTTPLAHGQLMAKGALQTIETVDSVELGARGI 257
Query: 362 QEPCIVFS-PHWSLRLGPTIHLLRRWSGDHNSLLV 395
+EPCIVF+ ++ GP L W +S +
Sbjct: 258 REPCIVFAGDSVFMQKGPIAWFLEHWKQSEHSTCI 292
>gi|167533421|ref|XP_001748390.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773202|gb|EDQ86845.1| predicted protein [Monosiga brevicollis MX1]
Length = 577
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAK---GNIAYISGSNFA 188
V++C ++ ++ + E + + A S+G +G+ WI+S G + +I+ ++
Sbjct: 134 VQNCFDRITSVSYREHVKLHEGVQAWAVSAGYALGSAVWILSDGVEQVGLLRHIAPND-- 191
Query: 189 SGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 248
H F +A+ ++ S L D D +Q+
Sbjct: 192 RRHPKPFAQQALASCGTLVCSHLKMAD--HDPNQA------------------------- 224
Query: 249 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 308
+++LA ++V GG V+IP++ GVFL L+E + ++ + + ++ A+
Sbjct: 225 VQRLAMTVG---EAVSQGGHVVIPVDLNGVFLDLMELLMTHLQNCGVVANMVVVGRYAKA 281
Query: 309 LLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 368
+LAY + WL K ++ +++ P F + + I+ I +F +V P+ P + F
Sbjct: 282 VLAYADIYSAWLAKSKRSRVYEPKPPFPYNEFIQSGHIKLFSSVLDPEFSRLPTGPAVFF 341
Query: 369 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKL 427
SLR G + + G+ H++++ + VD V F + +V+Q +G
Sbjct: 342 VEDPSLRYGDGLAAVEMIMGNPHSAIIGISPTVDIVERVGVFSNVRARVIQLPIDAGLHP 401
Query: 428 QKVQPLLKILQPKLVLF 444
+ + LL+ +Q + V+
Sbjct: 402 KDLNNLLRHMQARKVIL 418
>gi|328872790|gb|EGG21157.1| hypothetical protein DFA_01032 [Dictyostelium fasciculatum]
Length = 610
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 39/245 (15%)
Query: 42 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 101
++ LP++T F+ KIY TE +IG+ + + + E + GAE+++ + +
Sbjct: 124 NLISLPYITEHTSFNGKIYATEPTIQIGRSNINQY-WQSTELLKLIGAEQANSA-FKHAK 181
Query: 102 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
+ L S + C K+Q +R+ E I+A SS
Sbjct: 182 SWKTLYSRFD--------------------TEKCFEKIQAVRYNEFINLYS-FTIRATSS 220
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS--LDSTED 219
G +G+CNW+I I Y+S S+ + D ++IQ D+ +Y+ + L
Sbjct: 221 GYCLGSCNWVIESMNEKIVYLSDSSVYERYPEPIDLQSIQSPDVFIYASKMNHPLQQPPS 280
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
I N + S + Y E++ E+ C +++ GGSVLIP+ G
Sbjct: 281 I--------NGQQQHQQQSFNPYMENINEL------FHCIGNTISNGGSVLIPVYSCGTV 326
Query: 280 LQLLE 284
L L E
Sbjct: 327 LDLFE 331
>gi|118370162|ref|XP_001018283.1| hypothetical protein TTHERM_01159920 [Tetrahymena thermophila]
gi|89300050|gb|EAR98038.1| hypothetical protein TTHERM_01159920 [Tetrahymena thermophila
SB210]
Length = 747
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 35/358 (9%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEE---LICMNMEYRQFYGAEESSGPQWMKWEE 102
LPFL + AK+Y T A+IGQ +++E L+ +E +G + +
Sbjct: 140 LPFLFQQNKLKAKVYATVPVAQIGQHVLQEYYKLVQNRNRNIDLSSSENKNGQYFQNSQN 199
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAH--VKDCISKVQTLRFGEEACYNGI-LIIKAF 159
S + + E+ ++ +++ +SK+ T+ FG++ G+ II+
Sbjct: 200 SYFQESEFLDLFETQYDLEINQWADIFSYEDIQNALSKITTMNFGQKLQLEGVDTIIEPV 259
Query: 160 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 219
SSG IG+C WI+ +A N A H + Q S L DS +
Sbjct: 260 SSGYSIGSCVWILEYHSNRLAVF---NNACKHNIRHTLNLDQSSKL--------KDSLDF 308
Query: 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 279
+ + F N +EL ++ S L A ++ +++IPI G+
Sbjct: 309 LFVTPFL---NTSKELTALTKQFNTSYLSEAYLIKFFQLAQQLLQQKQNLIIPIRDGGII 365
Query: 280 LQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF---SGDPLFA 336
L LL+ + + +S YII A + + N+ E+L + Q+K+F +P A
Sbjct: 366 LDLLDILE--KKLASFIRHFYIICESALPYIHFGNSNVEFLNEILQKKIFCENPENPFSA 423
Query: 337 HVKLI-KEKKIHVFPAVHSPKLLMNWQ---------EPCIVFSPHWSLRLGPTIHLLR 384
+ + + K + I + P + + L Q P I F SLRLG T+ LL+
Sbjct: 424 YDQFVQKNQNISILPDFIAFQQLSKSQPLQSLIINRTPSIFFVVDSSLRLGNTMQLLK 481
>gi|256084683|ref|XP_002578556.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|350644758|emb|CCD60512.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
Length = 619
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 139/353 (39%), Gaps = 79/353 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T + G+ IY+T I +++E+ +N+E R +++ M +
Sbjct: 76 ALPYMTEVIGYDGPIYMTHPTKAICPILLEDYRKINVERR----GDQNFFTSDMIYR--- 128
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
C+ V+ C+ QT++ +E L I+AF +G
Sbjct: 129 -----------------------CMTKVR-CVYIHQTVKVDDE------LEIQAFYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA +++ ++ Y N + + + DL++ TE ++
Sbjct: 159 LGAAMFLVRVGTNSVLYTGDYNMTPDRHLGAAWVSRCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E E +EK+ V+AGG VLIP+ +G +L
Sbjct: 210 IRDSKRTRER------------EFLEKIH-------ARVEAGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E ++ +PIY +AE+ Y W ++ +E + F H+K + +
Sbjct: 251 LLETYWERMNISVPIYFSMGMAEKANEYYKLFISWTNQKIKETFVKRNMFDFKHIKPLGQ 310
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
V +P P +VF+ L G ++H+ R+W+ D +++V+
Sbjct: 311 G------TVDNPG-------PMVVFATPGMLHAGQSLHIFRKWASDERNMVVI 350
>gi|74220481|dbj|BAE31460.1| unnamed protein product [Mus musculus]
Length = 600
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 79/353 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ F E +LK+PIY + + E+ Y W ++ ++ G+ F H+K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQGNMFEFKHIKAFD- 309
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 ------------RTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|242013971|ref|XP_002427672.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis]
gi|212512102|gb|EEB14934.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis]
Length = 572
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 151/416 (36%), Gaps = 95/416 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+LT M G++ IY+T I +++E++ +++E K E+
Sbjct: 53 ALPYLTEMVGYNGPIYMTHPTKAISPILLEDMRKISVE----------------KKGEVN 96
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV T+ + + L IKA+ +G
Sbjct: 97 FFTSQM---------------------IKDCMKKVITVTLHQSIMVDSQLEIKAYYAGHV 135
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 136 LGAAMFWIRVGNLSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 186
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C ++ GG VLIP+ +G +L
Sbjct: 187 IRDS---------------KRCRERDFLKKVHEC----IEKGGKVLIPVFALGRAQELCI 227
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK+PIY + E+ Y W Q+ K F + F H+K
Sbjct: 228 LLETYWERMNLKVPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 286
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL-------- 394
I W P +VF+ L G ++ + ++W+ + N+++
Sbjct: 287 RSYID-----------QAW--PMVVFATPGMLHAGLSLQIFKKWAPNENNMVIMPGFCVA 333
Query: 395 ------VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+L + E + M V SF + + + L++ +PK VL
Sbjct: 334 GTVGHKILSGQKKIEFENRQIVDVKMSVQYMSFSAHADAKGIMQLIQYCEPKNVLL 389
>gi|402589534|gb|EJW83466.1| hypothetical protein WUBG_05625, partial [Wuchereria bancrofti]
Length = 231
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M +L LPF T F+ +Y T+ ++G+L+MEEL +++ EE W K
Sbjct: 105 MSLLALPFFTEKTNFTGVVYATDPTLQLGRLVMEEL----LDFFDRVDREEQDS-SWKKP 159
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 158
P+ D E P + +++C++KVQ + F E +G + A
Sbjct: 160 ALFMSFPNVP-----TSDPREWK---PFYSREQMENCLAKVQRVSFRESINIHGAATVAA 211
Query: 159 FSSGLDIGACNWII 172
+SSG IG+CNWI+
Sbjct: 212 YSSGYSIGSCNWIV 225
>gi|297279172|ref|XP_001092173.2| PREDICTED: integrator complex subunit 11 isoform 3 [Macaca mulatta]
Length = 579
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 55 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 86
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 87 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 137
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 138 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 188
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 189 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 229
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 230 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 282
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 283 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 329
>gi|12053137|emb|CAB66747.1| hypothetical protein [Homo sapiens]
gi|49065540|emb|CAG38588.1| FLJ20542 [Homo sapiens]
gi|117645260|emb|CAL38096.1| hypothetical protein [synthetic construct]
gi|208966056|dbj|BAG73042.1| cleavage and polyadenylation specific factor 3-like [synthetic
construct]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T + I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHSTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|74198351|dbj|BAE39661.1| unnamed protein product [Mus musculus]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|324504608|gb|ADY41989.1| Integrator complex subunit 11 [Ascaris suum]
Length = 588
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 154/421 (36%), Gaps = 105/421 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G+ IY+T I +++E+ + EYR E
Sbjct: 76 ALPYMTEMVGYEGPIYMTYPTKAIAPVLLEDFRKVQTEYRG----------------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +K C+ KV + EE + L I+AF +G
Sbjct: 120 FFTSQM---------------------IKTCMRKVTPVNVNEEVNVDDKLSIQAFYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA ++I GS+ ++Y+ ++T D +
Sbjct: 159 LGAAMFLIK---------------------------VGSESVIYT--GDFNTTADRHLGA 189
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 281
+ +L+ S + Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 190 AHVEPGLKPDLLISETTYATTIRDSKRARERDFLKKVH-DCVANGGKVLIPVFALGRAQE 248
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
L + + E L +PI+ +AE+ Y W ++ + F H +
Sbjct: 249 LCILLESYWERMDLTVPIFFSHGLAEKATQYYRLFISWTNEKIKRT-------FVHRNMF 301
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--- 398
K I F S + P ++FS L G ++ + ++W D +++++
Sbjct: 302 DFKHIRPFDQSFS-----DSPGPMVLFSTPGMLHGGQSLRVFKKWCSDEKNMVIMPGFCV 356
Query: 399 ---------------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
E+D ++ I++ V SF + + + L++ +PK V+
Sbjct: 357 AGTIGAKVIGGAKKVEIDGKML-----DINLGVEYMSFSAHADAKGIMQLIRQCEPKNVM 411
Query: 444 F 444
F
Sbjct: 412 F 412
>gi|426327394|ref|XP_004024503.1| PREDICTED: integrator complex subunit 11 isoform 3 [Gorilla gorilla
gorilla]
Length = 571
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 274
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|354495797|ref|XP_003510015.1| PREDICTED: integrator complex subunit 11-like [Cricetulus griseus]
gi|344251677|gb|EGW07781.1| Integrator complex subunit 11 [Cricetulus griseus]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|374253821|ref|NP_001243389.1| integrator complex subunit 11 isoform 3 [Homo sapiens]
gi|194386866|dbj|BAG59799.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 274
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|321468347|gb|EFX79332.1| hypothetical protein DAPPUDRAFT_304859 [Daphnia pulex]
Length = 597
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 83/355 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LPF+T M G++ IY+T I +++E++
Sbjct: 75 ALPFMTEMVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G AH+KDC+ KV + + + + IKA+ +G
Sbjct: 107 ------RKVAVERKGET---NFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + ID+
Sbjct: 158 LGAAMFHVKVGNQSVVYTGDYNMTPDRHLGAAW----------------------IDKCR 195
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++ S S Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 196 --------PNILISESTYATTIRDSKRCRERDFLKKVH-DCVDRGGKVLIPVFALGRAQE 246
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
L + + E +LK PIY + E+ Y W Q+ K F +F
Sbjct: 247 LCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFEF---- 301
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
K I F ++ + P +VF+ L G ++ L ++W+ + N++L++
Sbjct: 302 --KHIRPFDKSYA-----DTPGPMVVFATPGMLHAGLSLQLFKKWAPNENNMLIM 349
>gi|76559911|ref|NP_001029064.1| integrator complex subunit 11 [Rattus norvegicus]
gi|119371245|sp|Q3MHC2.1|INT11_RAT RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|75867808|gb|AAI05304.1| Cleavage and polyadenylation specific factor 3-like [Rattus
norvegicus]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|149024842|gb|EDL81339.1| similar to RIKEN cDNA 2410006F12 [Rattus norvegicus]
Length = 601
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 77 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 108
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 109 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 159
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 210
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 251
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 304
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|21312614|ref|NP_082296.1| integrator complex subunit 11 [Mus musculus]
gi|81904239|sp|Q9CWS4.1|INT11_MOUSE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|12845859|dbj|BAB26928.1| unnamed protein product [Mus musculus]
gi|26355309|dbj|BAC41135.1| unnamed protein product [Mus musculus]
gi|74192536|dbj|BAE43054.1| unnamed protein product [Mus musculus]
gi|74219576|dbj|BAE29558.1| unnamed protein product [Mus musculus]
gi|148683102|gb|EDL15049.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b
[Mus musculus]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|358333178|dbj|GAA51732.1| integrator complex subunit 11 [Clonorchis sinensis]
Length = 649
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 160/413 (38%), Gaps = 92/413 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T + G+ IY+T I +++++ + +E R E++ M +
Sbjct: 145 ALPYMTEIVGYDGPIYMTHPTKAICPILLDDYRKITVERR----GEQNFFTSEMIYR--- 197
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
C++ VK C+ QT++ +E L ++AF +G
Sbjct: 198 -----------------------CMSKVK-CVYVHQTVKVDDE------LELQAFYAGHV 227
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA ++I ++ Y N + + + D+++ TE ++
Sbjct: 228 LGAAMFLIRVGSQSVLYTGDYNMTPDRHLGAAWVSRCCPDILI---------TESTYATT 278
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E E +EK+ V+AGG VLIP+ +G +L
Sbjct: 279 IRDSKRARER------------EFLEKIH-------ARVEAGGKVLIPVFALGRAQELCI 319
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E ++ +PIY +AE+ Y W ++ +E + F H+K + +
Sbjct: 320 LLETYWERMNISVPIYFSMGMAEKANEYYKLFISWTNQKIKETFVKRNMFEFKHIKPLGQ 379
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDA- 402
+++ P +VF+ L G ++H+ R+W+ D +++V+ A
Sbjct: 380 G-------------IVDNPGPMVVFATPGMLHAGQSLHIFRKWAPDERNMVVIPGYCVAG 426
Query: 403 --------ELAVLPFK----PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
+ L F ++M+V SF + + + L+ QP+ VL
Sbjct: 427 TVGYKILNGVKRLEFDRQALDVNMRVEYLSFSAHADARGIMQLISHCQPRNVL 479
>gi|321457255|gb|EFX68345.1| hypothetical protein DAPPUDRAFT_218302 [Daphnia pulex]
Length = 597
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 83/355 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LPF+T M G++ IY+T I +++E++
Sbjct: 75 ALPFMTEMVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G AH+KDC+ KV + + + + IKA+ +G
Sbjct: 107 ------RKVAVERKGET---NFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + ID+
Sbjct: 158 LGAAMFHVKVGNQSVVYTGDYNMTPDRHLGAAW----------------------IDKCR 195
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++ S S Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 196 --------PNILISESTYATTIRDSKRCRERDFLKKVH-DCVDRGGKVLIPVFALGRAQE 246
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
L + + E +LK PIY + E+ Y W Q+ K F +F
Sbjct: 247 LCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFEF---- 301
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
K I F ++ + P +VF+ L G ++ L ++W+ + N++L++
Sbjct: 302 --KHIRPFDKSYA-----DTPGPMVVFATPGMLHAGLSLQLFKKWAPNENNMLIM 349
>gi|380798915|gb|AFE71333.1| integrator complex subunit 11 isoform 2, partial [Macaca mulatta]
Length = 588
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 64 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 95
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 96 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 146
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 147 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 197
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 198 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 238
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 239 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 291
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 292 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 338
>gi|444519369|gb|ELV12789.1| Integrator complex subunit 11 [Tupaia chinensis]
Length = 601
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 77 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 108
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 109 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 159
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 210
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 251
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 304
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|348551496|ref|XP_003461566.1| PREDICTED: integrator complex subunit 11 [Cavia porcellus]
Length = 600
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|395840791|ref|XP_003793235.1| PREDICTED: integrator complex subunit 11 isoform 1 [Otolemur
garnettii]
Length = 600
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|296206477|ref|XP_002750225.1| PREDICTED: integrator complex subunit 11 isoform 1 [Callithrix
jacchus]
Length = 600
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|197099184|ref|NP_001124760.1| integrator complex subunit 11 [Pongo abelii]
gi|55725797|emb|CAH89679.1| hypothetical protein [Pongo abelii]
Length = 655
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFTDNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|397476276|ref|XP_003809533.1| PREDICTED: integrator complex subunit 11 isoform 1 [Pan paniscus]
gi|410206788|gb|JAA00613.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410251172|gb|JAA13553.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410297680|gb|JAA27440.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410349815|gb|JAA41511.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|402852593|ref|XP_003891002.1| PREDICTED: integrator complex subunit 11 isoform 1 [Papio anubis]
gi|355557446|gb|EHH14226.1| hypothetical protein EGK_00111 [Macaca mulatta]
gi|387540112|gb|AFJ70683.1| integrator complex subunit 11 [Macaca mulatta]
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|343958192|dbj|BAK62951.1| protein related to CPSF subunits 68 kDa [Pan troglodytes]
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|441671688|ref|XP_004093259.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 11
[Nomascus leucogenys]
Length = 585
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 127/351 (36%), Gaps = 77/351 (21%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP+ + M G+ IY+T I +++E+
Sbjct: 77 LPYFSEMVGYDGPIYMTHPTQAICPILLEDY----------------------------- 107
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165
RKIA+ + G +KDC+ KV + + + L IKA+ +G +
Sbjct: 108 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVL 159
Query: 166 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 225
GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATTI 210
Query: 226 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 285
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVXALGRAQELCIL 251
Query: 286 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 345
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------KH 304
Query: 346 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|403297738|ref|XP_003939709.1| PREDICTED: integrator complex subunit 11 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVEH-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|118572558|sp|Q5NVE6.2|INT11_PONAB RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|33300633|ref|NP_060341.2| integrator complex subunit 11 isoform 2 [Homo sapiens]
gi|118572557|sp|Q5TA45.2|INT11_HUMAN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein; AltName: Full=Protein
related to CPSF subunits of 68 kDa; Short=RC-68
gi|14124912|gb|AAH07978.1| Cleavage and polyadenylation specific factor 3-like [Homo sapiens]
gi|60650138|tpg|DAA05669.1| TPA_exp: beta-lactamase fold protein family member RC-68 [Homo
sapiens]
gi|78100161|tpg|DAA05728.1| TPA_exp: integrator complex subunit 11 [Homo sapiens]
gi|119576636|gb|EAW56232.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a
[Homo sapiens]
gi|119576638|gb|EAW56234.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a
[Homo sapiens]
Length = 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|426327390|ref|XP_004024501.1| PREDICTED: integrator complex subunit 11 isoform 1 [Gorilla gorilla
gorilla]
Length = 600
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|221055181|ref|XP_002258729.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808799|emb|CAQ39501.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 764
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 34/283 (12%)
Query: 153 ILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF-ASGHAMDFDYRAIQGSDLILYSDL 211
I+ I +SSG +G+CN++I+ N+ I+ S + + D ++ +D +L++
Sbjct: 201 IVCITPYSSGHSVGSCNFLINTNLLNLCIINKSCYNVKRYPSPLDLACLEKADFVLFTAY 260
Query: 212 SSLDS-TEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM----------EKLAFICSCAI 260
S ++ E+ + + + + S S E +E + L ICS +
Sbjct: 261 SRGNTGAEEPSERRNAPTEGDPKGESPSRSLASERTKERINMCIEKNYKDSLNKICSIVL 320
Query: 261 DSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSLKIPIYIISSVAEELLAYTNTI 316
++K+ G VLIP++ FL+L+E I + + ++ I+ I ++ +
Sbjct: 321 RTIKSKGCVLIPVDLHFLYFLELIELIGVVISKYLAKEEQVLIFTIIGNISNVIHQADLC 380
Query: 317 PEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
EW+ + R++K FS D + + +LI I+ + ++ PC+
Sbjct: 381 AEWVEESRKKKCSKVSNPQGPFSIDIMIKNNRLITGNDINDVTKL--------FRYPCVC 432
Query: 368 FSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELAVLPF 409
F SLR + LL +W+ ++NSLL+++ D + PF
Sbjct: 433 FVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVSVLDPF 475
>gi|343958314|dbj|BAK63012.1| protein related to CPSF subunits 68 kDa [Pan troglodytes]
Length = 600
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVHDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|126649161|ref|XP_001388253.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117175|gb|EAZ51275.1| hypothetical protein cgd5_550 [Cryptosporidium parvum Iowa II]
Length = 1002
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 261 DSVKAGGSVLIPINRVGVF-LQLLEQIA--IFMECSSLKIPIYIISSVAEELLAYTNTIP 317
D++ GS+LIPI+ G+ L+++E I I +++P+YII +L +
Sbjct: 574 DTLNKNGSILIPIDCFGLLCLEIVEFIGQKISELTMPIQVPMYIIGGGISTILLNADISS 633
Query: 318 EWLCKQRQEKLFSGDP----LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 373
EW + R K+ +P LF+ +K K +++ F ++ +L ++EP I F+ + +
Sbjct: 634 EWTSQSRTRKVMLPNPNPPFLFSFLK--KSNRLYTFHTLN--ELSTVYREPAIFFATNSN 689
Query: 374 LRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 410
++ GP+ L + + + +N+L+++++ VD E + FK
Sbjct: 690 MKFGPSYDLYKTLNKNPNNTLIIIDSLVDFENFINNFK 727
>gi|193786492|dbj|BAG51775.1| unnamed protein product [Homo sapiens]
Length = 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|432090010|gb|ELK23618.1| Integrator complex subunit 11 [Myotis davidii]
Length = 561
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 128/351 (36%), Gaps = 77/351 (21%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP+ + M G+ IY+T I +++E+
Sbjct: 111 LPYFSEMVGYDGPIYMTHPTQAICPILLEDY----------------------------- 141
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165
RKIA+ + G +KDC+ KV +R + + L IKA+ +G +
Sbjct: 142 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVRLHQTVQVDEELQIKAYYAGHVL 193
Query: 166 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 225
GA + I ++ Y N + + +L++ TE ++
Sbjct: 194 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATTI 244
Query: 226 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 285
D E + L E+VE GG VLIP+ +G +L
Sbjct: 245 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCIL 285
Query: 286 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 345
+ F E +LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 286 LETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMF------EFKH 338
Query: 346 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 339 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 384
>gi|397476278|ref|XP_003809534.1| PREDICTED: integrator complex subunit 11 isoform 2 [Pan paniscus]
Length = 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|158256210|dbj|BAF84076.1| unnamed protein product [Homo sapiens]
Length = 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|426327392|ref|XP_004024502.1| PREDICTED: integrator complex subunit 11 isoform 2 [Gorilla gorilla
gorilla]
Length = 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|374253819|ref|NP_001243385.1| integrator complex subunit 11 isoform 1 [Homo sapiens]
gi|119576642|gb|EAW56238.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_f
[Homo sapiens]
Length = 606
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|351697497|gb|EHB00416.1| Integrator complex subunit 11 [Heterocephalus glaber]
Length = 672
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 149 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 180
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 181 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 231
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 232 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 282
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 283 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 323
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 324 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 376
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 377 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 423
>gi|389583292|dbj|GAB66027.1| hypothetical protein PCYB_081880 [Plasmodium cynomolgi strain B]
Length = 878
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 61/304 (20%)
Query: 153 ILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA-SGHAMDFDYRAIQGSDLILYSDL 211
I+ I +SSG +G+CN+++ N+ I+ S + H D ++ +D +L++
Sbjct: 300 IVCITPYSSGYSLGSCNFVVKTDLMNLCIINKSCYNIKRHPSTLDLTCLEKADFVLFTAY 359
Query: 212 SSLDST------------------EDIDQSSFSDDNNN------------WEELMNSL-- 239
D++ E ++S+ S N E +N
Sbjct: 360 VKGDTSTGEPPQSGNAPSGGASKGESPNRSTPSGSAQNSSVPSEGPPSERTREKINMCIE 419
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSL 295
NY +S+ + ICS + ++K+ G VLIP++ FL+L+E I + +
Sbjct: 420 KNYKDSLNK------ICSIVLRTIKSKGCVLIPVDLNFLYFLELIELIGVVISKYLAKEE 473
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKI 346
++ I+ I ++ + EW+ + R++K FS + + + +LI I
Sbjct: 474 QVLIFTIIGNINNVIHQADLCAEWVEESRKKKCSKISNPQGPFSIEIMIKNNRLITGNDI 533
Query: 347 HVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELA 405
+ + ++ PC+ F SLR + LL +W+ ++NSLL+++ D
Sbjct: 534 NDISKL--------FRYPCVCFVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVAV 585
Query: 406 VLPF 409
+ PF
Sbjct: 586 LAPF 589
>gi|338722203|ref|XP_001496423.3| PREDICTED: integrator complex subunit 11 [Equus caballus]
Length = 571
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERVNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 274
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|440911726|gb|ELR61363.1| Integrator complex subunit 11 [Bos grunniens mutus]
Length = 599
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|274326663|ref|NP_001094578.1| integrator complex subunit 11 [Bos taurus]
gi|152941100|gb|ABS44987.1| related to CPSF subunits 68 kDa [Bos taurus]
Length = 599
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|15029864|gb|AAH11155.1| Cleavage and polyadenylation specific factor 3-like [Mus musculus]
Length = 600
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVADHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|118572556|sp|Q2YDM2.2|INT11_BOVIN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|158455110|gb|AAI10156.2| CPSF3L protein [Bos taurus]
Length = 599
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|301788922|ref|XP_002929872.1| PREDICTED: integrator complex subunit 11-like [Ailuropoda
melanoleuca]
Length = 600
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|359319514|ref|XP_003639102.1| PREDICTED: integrator complex subunit 11-like [Canis lupus
familiaris]
Length = 600
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|296479091|tpg|DAA21206.1| TPA: cleavage and polyadenylation specific factor 3-like [Bos
taurus]
Length = 599
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKXGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|426240429|ref|XP_004014105.1| PREDICTED: integrator complex subunit 11 [Ovis aries]
Length = 515
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|119576648|gb|EAW56244.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_j
[Homo sapiens]
Length = 476
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 40/265 (15%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 2 IKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDR 61
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ + +L++ TE ++ D E + L E+VE
Sbjct: 62 HLGAAWIDKCRPNLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER--- 107
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
GG VLIP+ +G +L + F E +LK+PIY + + E+
Sbjct: 108 --------------GGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANH 153
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
Y W Q+ K F +F K I F + + P +VF+
Sbjct: 154 YYKLFIPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATP 201
Query: 372 WSLRLGPTIHLLRRWSGDHNSLLVL 396
L G ++ + R+W+G+ +++++
Sbjct: 202 GMLHAGQSLQIFRKWAGNEKNMVIM 226
>gi|281348165|gb|EFB23749.1| hypothetical protein PANDA_020173 [Ailuropoda melanoleuca]
Length = 591
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 67 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 98
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 99 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 149
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 150 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 200
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 201 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 241
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 242 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 294
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 295 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 341
>gi|207079923|ref|NP_001128922.1| DKFZP459J1110 protein [Pongo abelii]
gi|56403907|emb|CAI29738.1| hypothetical protein [Pongo abelii]
Length = 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYVTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ T ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TGSTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|56403864|emb|CAI29717.1| hypothetical protein [Pongo abelii]
Length = 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ-RQEKLFSGDPLFAHVKLIKE 343
+ F E +LK+PIY + + E+ Y W ++ R+ + F H+K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTSVQRNMFEFKHIKAFD- 309
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 ------------RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|431922648|gb|ELK19568.1| Integrator complex subunit 11 [Pteropus alecto]
Length = 603
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIRVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|147835406|emb|CAN74444.1| hypothetical protein VITISV_031469 [Vitis vinifera]
Length = 215
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 39 SPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMM 73
SPMGM GLPFL+R+ GF AKIY+TE ARI +LMM
Sbjct: 159 SPMGMPGLPFLSRVNGFRAKIYVTEVIARIARLMM 193
>gi|410989914|ref|XP_004001198.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 11
[Felis catus]
Length = 598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMF------EFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|301618510|ref|XP_002938656.1| PREDICTED: integrator complex subunit 11 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301618512|ref|XP_002938657.1| PREDICTED: integrator complex subunit 11 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE+ GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVEK-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNDKNMVIM 350
>gi|260790823|ref|XP_002590440.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae]
gi|229275634|gb|EEN46451.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae]
Length = 597
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP++T M G+ IY+T I +++E+
Sbjct: 68 LPYMTEMVGYDGPIYMTHPTKAICPILLEDY----------------------------- 98
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165
RKI + G E +KDC+ KV + + + L IKA+ +G +
Sbjct: 99 -----RKITVDRKG-ESQANFFTSQMIKDCMKKVIPVNLHQTVQVDDELEIKAYYAGHVL 152
Query: 166 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 225
GA ++I ++ Y N + + DL++ TE ++
Sbjct: 153 GAAMFLIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATTI 203
Query: 226 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 285
D E + L E++E+ GG VLIP+ +G +L
Sbjct: 204 RDSKRCRER--DFLKKVHETIEK-----------------GGKVLIPVFALGRAQELCIL 244
Query: 286 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIKE 343
+ F E ++K PIY + + E+ Y W Q+ K F + F H+K
Sbjct: 245 LETFWERMNIKAPIYFSTGLTEKANNYYRLFITW-TNQKIRKTFVKRNMFEFKHIKAFDR 303
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I + P +VF+ L G ++ + ++W+ D +++++
Sbjct: 304 SYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPDSKNMVIM 343
>gi|355680857|gb|AER96662.1| cleavage and polyadenylation specific factor 3-like protein
[Mustela putorius furo]
Length = 440
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 85 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 116
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 117 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 167
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 168 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 218
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 219 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 259
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 260 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 312
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 313 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 359
>gi|350585498|ref|XP_003127541.3| PREDICTED: integrator complex subunit 11-like [Sus scrofa]
Length = 599
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ K + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKAVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|417403203|gb|JAA48419.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Desmodus rotundus]
Length = 603
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELQIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|449268484|gb|EMC79348.1| Integrator complex subunit 11 [Columba livia]
Length = 600
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 147/414 (35%), Gaps = 91/414 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL---------- 394
I F + + P +VF+ L G ++ + R+W+G+ +++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGT 358
Query: 395 ----VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+L + E+ + M+V SF + + + L++ +P+ VL
Sbjct: 359 VGHKILSGQRKLEMEGRQILEVKMQVEYMSFSAHADAKGIMQLIRQAEPRNVLL 412
>gi|344283025|ref|XP_003413273.1| PREDICTED: integrator complex subunit 11-like [Loxodonta africana]
Length = 719
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 126/351 (35%), Gaps = 77/351 (21%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP+ + M G+ IY+T I +++E+
Sbjct: 196 LPYFSEMVGYDGPIYMTPPTQAICPILLEDY----------------------------- 226
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165
RKIA+ + G +KDC+ KV + + + L IKA+ +G +
Sbjct: 227 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVL 278
Query: 166 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 225
GA + I ++ Y N + + +L++ TE ++
Sbjct: 279 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATTI 329
Query: 226 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 285
D E + L E+VE GG VLIP+ +G +L
Sbjct: 330 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCIL 370
Query: 286 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 345
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 371 LETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------KH 423
Query: 346 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 424 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 469
>gi|326932364|ref|XP_003212289.1| PREDICTED: integrator complex subunit 11-like [Meleagris gallopavo]
Length = 600
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|61098197|ref|NP_001012854.1| integrator complex subunit 11 [Gallus gallus]
gi|75571225|sp|Q5ZIH0.1|INT11_CHICK RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|53135966|emb|CAG32473.1| hypothetical protein RCJMB04_26e19 [Gallus gallus]
Length = 600
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|209875945|ref|XP_002139415.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555021|gb|EEA05066.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 875
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 135/310 (43%), Gaps = 30/310 (9%)
Query: 201 QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI 260
+ S+++ Y + S+ E I + ++ N +L N LS Y + ++ I +
Sbjct: 432 EASNVVFYGSMISIKQAEYIHKIV---ESTNIVQLSN-LSYY------LTEIKIILNYIK 481
Query: 261 DSVKAGGSVLIPINRVGVF-LQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIP 317
++ GS+LIP + G + ++L+E I ++ ++ +PIYI+ +L+ +
Sbjct: 482 HTLYRSGSILIPTDLYGQYCMELIEYIGQYVSELPIQYQVPIYIVGGGISTILSNADVSS 541
Query: 318 EWLCKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
EW C + K +P+ F +L +++ F + +L + ++EP I F+ L
Sbjct: 542 EWTCSNKSRKSMLPNPISPFLFSQLKSSNRLYTFHTIE--ELSIVYREPAIFFASSSDLS 599
Query: 376 LGPTIHLLRR-WSGDHNSLLVLENEVDAELAVLPFKPISMKV--LQCSFLSGKKLQKVQP 432
GP I +L + +S N+LL ++ D + + + K+ ++ + +
Sbjct: 600 FGPWIRILNQLYSDPKNTLLTIDPCTDISYLTMKYNLNNDKIDHIELVYFPLILFPTLNS 659
Query: 433 LLKIL-------QPKL-VLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEI 484
L+ + PK VL P H SDV +F + + + + + +P ++
Sbjct: 660 LMTEIFNNHNSKNPKFKVLIPLNKNNHSEDSDVINFPIEY--KTKILEVPRQIQTLTRRS 717
Query: 485 AADIASKFQW 494
+ K+ W
Sbjct: 718 NDENGVKYNW 727
>gi|417403209|gb|JAA48422.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Desmodus rotundus]
Length = 604
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 123/354 (34%), Gaps = 80/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELQIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ F E +LK PIY + + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEFKHIKAFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 RAXXXAHPCA------------MVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|83314583|ref|XP_730423.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490141|gb|EAA21988.1| Drosophila melanogaster CG5222 gene product [Plasmodium yoelii
yoelii]
Length = 759
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 225 FSDDNNNWEELMNSLSNYDESVEEM-----------------EKLAFICSCAIDSVKAGG 267
S+D+NN ++L N +N E+ E + + L ICS + ++K G
Sbjct: 222 LSNDSNNSKKLSNDFNNCKETNENINEKISNKINVCFDKTYKDTLNKICSIVLKTIKKKG 281
Query: 268 SVLIPINRVGV-FLQLLEQIAIFMECSSLKIPIYIISSVA---EELLAYTNTIPEWLCKQ 323
VLIP++ + FL+L+E I + + K +I SV ++ + EW+ +
Sbjct: 282 CVLIPVDLCYLYFLELVELIGVIISKYLTKDEQVLIFSVMPNINNIIHQADLCAEWVEES 341
Query: 324 RQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
+++K FS D + + +LI E I+ + N++ PC+ F +L
Sbjct: 342 KKKKCSQISNPQGPFSIDIMIKNNRLIVENSIN--------DISKNFRYPCVCFIQDSTL 393
Query: 375 RLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 410
R LL +W D +NS+++L+ D + P+K
Sbjct: 394 RFSEANILLEKWGMDQNNSIILLDPYYDPISVLYPYK 430
>gi|302793925|ref|XP_002978727.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii]
gi|300153536|gb|EFJ20174.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii]
Length = 522
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 120/314 (38%), Gaps = 62/314 (19%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKV------QTLRF 144
GP +M + L P L RKI + G E H++ C+ KV QT+R
Sbjct: 84 GPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQFS---TLHIQQCMKKVIAVDLRQTIRV 140
Query: 145 GEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD 204
++ L +A+ +G +GA + + + Y N +
Sbjct: 141 SKD------LAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNMTPDRHL----------- 183
Query: 205 LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE--MEKLAFICSCAIDS 262
ID+ +L+ + S Y ++ E + K A +
Sbjct: 184 -----------GAAQIDRLK--------PDLLITESTYATTIRESRLAKEAEFLNVVHTC 224
Query: 263 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK 322
V GG VLIPI+ +G +L + + E +LK+PIY + + + AY + W
Sbjct: 225 VSKGGKVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYYKLLISW-TN 283
Query: 323 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
QR + + F HVFP + ++ PCI+F+ L G ++ +
Sbjct: 284 QRIKDTYVTRNAFDFK--------HVFPF---DRTQLDGNGPCILFATPGMLTGGLSLEV 332
Query: 383 LRRWSGDHNSLLVL 396
L+ W+ +LL++
Sbjct: 333 LKHWAPVEQNLLII 346
>gi|440801023|gb|ELR22048.1| cleavage and polyadenylation specific factor 3like, putative
[Acanthamoeba castellanii str. Neff]
Length = 657
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 130/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T M G+ IY+T I +++E+ YR+ E G E
Sbjct: 75 ALPYFTEMCGYDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 118
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV L + + L I+A+ +G
Sbjct: 119 FFTSQM---------------------IKDCMKKVVGLNVHQTVQVDEELEIRAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + D+++ TE ++
Sbjct: 158 LGAAMFYVRVGDQSVVYTGDYNMTPDRHLGAAWIEKLRPDVLI---------TESTYATT 208
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D+ W E + L + SC V+ GG VLIP+ +G +L
Sbjct: 209 IR-DSKRW--------------RERDFLKRVHSC----VEKGGKVLIPVFALGRAQELCI 249
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +L +PIY + + E+ Y W ++ + F H + K
Sbjct: 250 LLETYWERMNLTVPIYFSAGLTEKATNYYKLFIHWTNEKIKRT-------FVHRNMFDFK 302
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + L + P ++F+ L G ++ + ++W+ + +L+++
Sbjct: 303 HISTF-----ERGLADQPGPMVLFATPGMLHAGTSLEVFKKWAPNEKNLVII 349
>gi|158298905|ref|XP_319042.4| AGAP009923-PA [Anopheles gambiae str. PEST]
gi|157014111|gb|EAA13845.4| AGAP009923-PA [Anopheles gambiae str. PEST]
Length = 608
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 132/354 (37%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKG-ESNFFTPQM--IKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|410928941|ref|XP_003977858.1| PREDICTED: integrator complex subunit 11-like [Takifugu rubripes]
Length = 601
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LPF++ M G+ IY+T I +++E+
Sbjct: 76 ALPFMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|224079882|ref|XP_002197797.1| PREDICTED: integrator complex subunit 11 [Taeniopygia guttata]
Length = 600
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 122/327 (37%), Gaps = 54/327 (16%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 126 IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYNMTPDR 185
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ + DL++ TE ++ D E + L E+VE
Sbjct: 186 HLGAAWIDKCRPDLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER--- 231
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
GG VLIP+ +G +L + F E +LK PIY + + E+
Sbjct: 232 --------------GGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANH 277
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
Y W Q+ K F +F K I F + + P +VF+
Sbjct: 278 YYKLFITW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATP 325
Query: 372 WSLRLGPTIHLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVL 417
L G ++ + R+W+G+ +++ +L + E+ + M+V
Sbjct: 326 GMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQILEVKMQVE 385
Query: 418 QCSFLSGKKLQKVQPLLKILQPKLVLF 444
SF + + + L++ +P+ VL
Sbjct: 386 YMSFSAHADAKGIMQLIRQAEPRNVLL 412
>gi|170052069|ref|XP_001862054.1| cleavage and polyadenylation specificity factor subunit 3 [Culex
quinquefasciatus]
gi|167873079|gb|EDS36462.1| cleavage and polyadenylation specificity factor subunit 3 [Culex
quinquefasciatus]
Length = 615
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVVAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|302787435|ref|XP_002975487.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii]
gi|300156488|gb|EFJ23116.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii]
Length = 517
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 119/314 (37%), Gaps = 62/314 (19%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKV------QTLRF 144
GP +M + L P L RKI + G E H++ C+ KV QT+R
Sbjct: 79 GPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQFS---TLHIQQCMKKVIAVDLRQTIRV 135
Query: 145 GEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD 204
+ L +A+ +G +GA + + + Y N +
Sbjct: 136 SRD------LAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNMTPDRHL----------- 178
Query: 205 LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE--MEKLAFICSCAIDS 262
ID+ +L+ + S Y ++ E + K A +
Sbjct: 179 -----------GAAQIDRLK--------PDLLITESTYATTIRESRLAKEAEFLNVVHTC 219
Query: 263 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK 322
V GG VLIPI+ +G +L + + E +LK+PIY + + + AY + W
Sbjct: 220 VSKGGKVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYYKLLISW-TN 278
Query: 323 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
QR + + F HVFP + ++ PCI+F+ L G ++ +
Sbjct: 279 QRIKDTYVTRNAFDFK--------HVFPF---DRTQLDGPGPCILFATPGMLTGGLSLEV 327
Query: 383 LRRWSGDHNSLLVL 396
L+ W+ +LL++
Sbjct: 328 LKHWAPVEQNLLII 341
>gi|312381513|gb|EFR27247.1| hypothetical protein AND_06171 [Anopheles darlingi]
Length = 624
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 132/354 (37%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKG-ESNFFTPQM--IKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|432866809|ref|XP_004070946.1| PREDICTED: integrator complex subunit 11-like [Oryzias latipes]
Length = 599
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVYIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGMTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|34783058|gb|AAH00675.2| CPSF3L protein, partial [Homo sapiens]
Length = 473
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 40/263 (15%)
Query: 134 DCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAM 193
DC+ KV + + + L IKA+ +G +GA + I ++ Y N +
Sbjct: 1 DCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHL 60
Query: 194 DFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA 253
+ +L++ TE ++ D E + L E+VE
Sbjct: 61 GAAWIDKCRPNLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER----- 104
Query: 254 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYT 313
GG VLIP+ +G +L + F E +LK+PIY + + E+ Y
Sbjct: 105 ------------GGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYY 152
Query: 314 NTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 373
W Q+ K F +F K I F + + P +VF+
Sbjct: 153 KLFIPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGM 200
Query: 374 LRLGPTIHLLRRWSGDHNSLLVL 396
L G ++ + R+W+G+ +++++
Sbjct: 201 LHAGQSLQIFRKWAGNEKNMVIM 223
>gi|157107341|ref|XP_001649735.1| cleavage and polyadenylation specificity factor [Aedes aegypti]
gi|108879612|gb|EAT43837.1| AAEL004757-PA [Aedes aegypti]
Length = 613
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMIGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK PIY + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|68075103|ref|XP_679468.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500224|emb|CAH98858.1| conserved hypothetical protein [Plasmodium berghei]
Length = 848
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEM-----------------EKLAFICSCAID 261
+I+QS +D+NN ++ N +N E+ E + + L ICS +
Sbjct: 307 EINQSVKKNDSNNSKKNSNDFNNCKETNENINDKISNKINVCFEKTYKDSLNKICSIVLK 366
Query: 262 SVKAGGSVLIPINRVGV-FLQLLEQIAIFMECSSLKIPIYIISSVA---EELLAYTNTIP 317
++K G VLIP++ + FL+L+E I + + K +I S ++ +
Sbjct: 367 TIKKKGCVLIPVDLCYLYFLELVELIGVIISKYLTKDEQVLIFSAMPNINNIIHQADLCA 426
Query: 318 EWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 368
EW+ + +++K FS D + + +LI E I+ + N++ PC+ F
Sbjct: 427 EWVEESKKKKCSQISNPQGPFSIDIMIKNNRLIVENSIN--------DISKNFRYPCVCF 478
Query: 369 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 410
+LR LL +W D +NS+++L+ D + P+K
Sbjct: 479 IQDSTLRFSEANILLEKWGMDQNNSIILLDPYYDPISVLYPYK 521
>gi|334321967|ref|XP_001364674.2| PREDICTED: integrator complex subunit 11-like [Monodelphis
domestica]
Length = 600
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I + Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESAVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|355744837|gb|EHH49462.1| hypothetical protein EGM_00117, partial [Macaca fascicularis]
Length = 592
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 68 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 99
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKIA+ + G +KDC+ K + + L IKA+ +G
Sbjct: 100 ------RKIAVDKKGE---ANFFTSQMIKDCMKKEVAGHLHQTVQVDDELEIKAYYAGHV 150
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 151 LGAAMFQIKVGSESVVYTGDYNMTPERHLGAAWIDKCRPNLLI---------TESTYATT 201
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 202 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 242
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 243 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 295
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 296 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 342
>gi|66472504|ref|NP_001018457.1| integrator complex subunit 11 [Danio rerio]
gi|82192739|sp|Q503E1.1|INT11_DANRE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|63102425|gb|AAH95364.1| Zgc:110671 [Danio rerio]
Length = 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|224129964|ref|XP_002328847.1| predicted protein [Populus trichocarpa]
gi|222839145|gb|EEE77496.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK 296
L FI S ++SVKAGGSV+IP+N++G+ LQLLEQI +++E S++K
Sbjct: 7 LQFINS-QVNSVKAGGSVIIPLNQLGIVLQLLEQIPVYLESSAMK 50
>gi|300706889|ref|XP_002995677.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01]
gi|239604869|gb|EEQ82006.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01]
Length = 500
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 160/432 (37%), Gaps = 110/432 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LPF T + + IY+T+ + +++E+ +R+ A +SS ++ +++
Sbjct: 73 ALPFFTEICKYDGPIYMTKPTKAVIPILLED-------FRKI-SAPKSSDGKFFSYQD-- 122
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
+++C+ K+ T+ F E ++ I + +G
Sbjct: 123 ---------------------------IQNCLKKIITINFNETYKHDENFFITPYYAGHV 155
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
IGA + + ++ Y N M D S L DL +ST
Sbjct: 156 IGAAMFHVQVGSRSVVYTGDYN------MTPDRHLGAASIPCLRPDLLITEST------- 202
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
S++ +E E + C V GG VLIPI +G +L
Sbjct: 203 -----------YGSITRDCRKSKEREFFKAVLDC----VSNGGKVLIPIFALGRAQELCL 247
Query: 285 QIAIFMECSSLKIPIYIISSVAE-------ELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 337
+ E LK+PIY S + E + L+YTN E + K F H
Sbjct: 248 LLDSHWERMQLKVPIYFSSGLTEKANNIYKQFLSYTN---ETIKKNA----------FNH 294
Query: 338 VKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL 394
+VF H+ K ++ P ++F+ L G ++ + + W D +L+
Sbjct: 295 ---------NVFDFKHTTTFQKHFLDLNIPMVLFASPGMLHSGMSLKVFKEWCTDPKNLV 345
Query: 395 VLENEV------------DAELAVL-PFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKL 441
++ + E+ +L K I ++V +F + Q + L+K+ QPK
Sbjct: 346 IIPGYCVKGTVGDKVLNGNKEIEILGELKEIKIQVKNLAFSAHADAQGILNLIKMCQPKN 405
Query: 442 VLFPEEWRTHVS 453
V+ ++ +S
Sbjct: 406 VMLVHGEKSRIS 417
>gi|198413502|ref|XP_002128796.1| PREDICTED: similar to cleavage and polyadenylation specific factor
3-like [Ciona intestinalis]
Length = 605
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/415 (17%), Positives = 152/415 (36%), Gaps = 93/415 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M+G+ IY+T I +++E+ YR+ + E
Sbjct: 77 ALPYMSEMKGYDGPIYMTHPTKAICPILLED-------YRKITVDRKG---------ETN 120
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 121 FFDSKM---------------------IKDCMKKVIPVNLHQTIHVDDQLEIKAYYAGHV 159
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA +++ ++ Y N + + D+++ TE ++
Sbjct: 160 LGAAMFLLKVGTDSVLYTGDYNMTPDRHLGAAWVDKCRPDVLI---------TESTYATT 210
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHERVED-----------------GGKVLIPVFALGRAQELCI 251
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + + +LK+PIY + + + Y W ++ ++ + F H+K
Sbjct: 252 LLESYWDRMNLKVPIYFSAGLTNKATEYYKLFITWTNQKIKDTFVERNMFDFKHIKEFNR 311
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLE------ 397
I + P +VF+ L G ++ + +RW + +++++
Sbjct: 312 SYI-------------DNPGPMVVFATPGMLHGGLSLEIFKRWCTNEKNMIIMPGYCVAG 358
Query: 398 ---NEVDAELAVLPFKP-----ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
N++ + + + KP I M+V SF + + + L+++ +P V+
Sbjct: 359 TVGNKILSGMRKIELKPGQVVEIKMQVEYMSFSAHADAKGIMQLIRMCEPSNVML 413
>gi|124802126|ref|XP_001347374.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23494953|gb|AAN35287.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 915
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFMECSSLK---IPIYIISSV 305
+ L ICS + ++K G VLIP++ F++L+E I + + K + I+ + S
Sbjct: 411 DSLNKICSLVLKTIKNKGCVLIPVDLHFLYFIELIELIGVIISKHLPKEEQVLIFSVLSN 470
Query: 306 AEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPK 356
++++ N EW+ + R++K FS D + + +LI I+
Sbjct: 471 IQDVIHQLNLFAEWVEESRKKKCSKILNPQGPFSIDIMIKNNRLIIGNNIN--------D 522
Query: 357 LLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVL-PFKPISMK 415
+ ++ PC+ F SLR + LL +W+ + N+ L+L + + VL PFK K
Sbjct: 523 ITKQFRYPCVCFIHDSSLRFFESSLLLEKWANEQNNTLILVDPFYDPIKVLYPFKIYEKK 582
Query: 416 V 416
+
Sbjct: 583 I 583
>gi|326435554|gb|EGD81124.1| integrator complex subunit 11 [Salpingoeca sp. ATCC 50818]
Length = 620
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LPF + M G+ IY+T I L++E+ YR+ + E G E
Sbjct: 109 ALPFFSEMCGYDKPIYMTYPTKAICPLLLED-------YRKI--SVERKG-------ERN 152
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+SKVQ + + G + IKA+ +G
Sbjct: 153 FFTSQM---------------------IKDCMSKVQPVDLHQSVTLPGDIEIKAYYAGHV 191
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + D I+ TE ++
Sbjct: 192 LGAAMFHVRVGDKSVVYTGDYNMTPDRHLGTAWIDFCQPDAII---------TESTYATT 242
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C VK GG VLIP+ +G +L
Sbjct: 243 IRDS---------------KRCRERDFLTKVHRC----VKNGGKVLIPVFALGRAQELCI 283
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E L PIY + + E+ Y + ++ ++ F L K
Sbjct: 284 LLETYWERYKLDTPIYFSTGLTEKANEYYRLFVMYTNQKIKDT-------FVDRNLFDFK 336
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F ++ + P ++F+ L G + + +W+GD ++++L
Sbjct: 337 HIRAFDRSYA-----DQPGPQVLFATPGMLHAGVALEVFAKWAGDPRNMVIL 383
>gi|348503157|ref|XP_003439132.1| PREDICTED: integrator complex subunit 11-like [Oreochromis
niloticus]
Length = 601
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVIPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVHIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|195394529|ref|XP_002055895.1| GJ10637 [Drosophila virilis]
gi|194142604|gb|EDW59007.1| GJ10637 [Drosophila virilis]
Length = 597
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VSKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|193608339|ref|XP_001949326.1| PREDICTED: integrator complex subunit 11-like isoform 1
[Acyrthosiphon pisum]
gi|328710634|ref|XP_003244318.1| PREDICTED: integrator complex subunit 11-like isoform 2
[Acyrthosiphon pisum]
Length = 603
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/459 (18%), Positives = 165/459 (35%), Gaps = 103/459 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
L +LT G+ IY+T I +++E++ +EY EE +
Sbjct: 79 ALSYLTEHLGYHGPIYMTHPTKAIAPILLEDMRKHLVEYE----------------EEAK 122
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S+ ++DC+ KV + E + +KA+ +G
Sbjct: 123 YFTSSA---------------------IRDCMKKVTAVNLHEVVTVKDDIELKAYYAGHV 161
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y + + + L++ TE ++
Sbjct: 162 LGAAMFYIKVGNDSVVYTGDFSMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 212
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L N E ++ GG VLIPI +G +L
Sbjct: 213 IRDSKRCRER--DFLKNVHECIDR-----------------GGKVLIPIFALGRAQELCI 253
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
I + + LK+P+Y + + E+ +Y W ++ ++ + F H+K +
Sbjct: 254 LIDTYWDRMGLKVPVYFAAGLTEKANSYYKMFITWTNQKVRQTFVQRNMFDFKHIKPFDK 313
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL--------- 394
+H+P P +VF+ L G ++++ ++W+ D ++L
Sbjct: 314 ------TYMHNPG-------PMVVFATPGMLHAGLSLNIFKKWAPDEKNMLIVPGYCVSG 360
Query: 395 -----VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---PE 446
VL E F + M V SF + + + L+K +P+ VL E
Sbjct: 361 TVGNKVLSGSKKIEAEPNKFIDVKMSVEYLSFSAHADGKGIIQLIKNCEPQNVLLVHGEE 420
Query: 447 EWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIA 485
E + + F+++ Y +P+ E+ E+E A
Sbjct: 421 EKMKFLRAKIMQEFNINCY-------MPANGETVEIETA 452
>gi|408404949|ref|YP_006862932.1| beta-lactamase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365545|gb|AFU59275.1| beta-lactamase domain protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 628
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 28/207 (13%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEEL 309
E A + S +V AGG VL+P+ +G+ ++L + FM+ ++ + + S++E
Sbjct: 395 EAEARLASAISKTVSAGGHVLLPVPVIGISQEILLVLDRFMK--GVQARVLVEKSISEAT 452
Query: 310 LAYTNTIPEWLCKQ-RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 368
Y PE+L K+ RQ L S F F V S L EP ++
Sbjct: 453 AVY-EAYPEFLSKEVRQRVLESETSQFGSQ----------FSIVESESLKNGSSEPAVIL 501
Query: 369 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE-VDAELAVLP--FKPISMK----VLQC- 419
+P L GP++ L++ +GD HN L++L + VD ++ + +++K LQC
Sbjct: 502 APSSMLIGGPSVGYLKQIAGDPHNRLIMLSYQAVDTPGRIIQDGARQVTIKGEMINLQCQ 561
Query: 420 -----SFLSGKKLQKVQPLLKILQPKL 441
F S + +K L+PKL
Sbjct: 562 VERIDGFGSHSDYNQAMEYVKRLRPKL 588
>gi|340381556|ref|XP_003389287.1| PREDICTED: integrator complex subunit 11-like [Amphimedon
queenslandica]
Length = 610
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 149/420 (35%), Gaps = 104/420 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEEL--ICMNMEYRQFYGAEESSGPQWMKWEE 102
LP+ T M G++ IY+T I +++E+ +C++ + Q + +
Sbjct: 77 ALPYFTEMCGYNGPIYMTHPTKAICPVLLEDFRRVCVDKKGEQNFFTSQM---------- 126
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
+KDC+ KV T+ + + L IKA+ +G
Sbjct: 127 -----------------------------IKDCMRKVITVNLHQCVKVDDQLEIKAYYAG 157
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+GA + + ++ Y N + + DL++ TE
Sbjct: 158 HVLGAAMFHVRVGHQSVVYTGDYNMTPDRHLGSAWIDRCRPDLLI---------TESTYA 208
Query: 223 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 282
++ D E + L E +E G VLIP+ +G +L
Sbjct: 209 TTIRDSKRCRER--DFLKKLHECLER-----------------DGKVLIPVFALGRAQEL 249
Query: 283 LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIK 342
+ + E +LK PIY + + E+ Y W ++ + F H +
Sbjct: 250 CILLESYWERMNLKYPIYFSTGLTEKANHYYKLFISWTNQKIKNT-------FIHRNMFD 302
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN---- 398
K I F + ++ P IVF+ L G ++ + ++W+ D ++L++
Sbjct: 303 FKHIKAFDRSY-----IDQPGPMIVFATPGMLHAGLSLQIFKKWAEDEKNMLIMPGYCVP 357
Query: 399 --------------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
E+D +L I + V SF + + + L+++ +PK VL
Sbjct: 358 GTIGHKVLSGTKKIEIDKKLV-----NIRLSVQYMSFSAHADAKGIMQLIQLAEPKNVLL 412
>gi|414881435|tpg|DAA58566.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 558
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 166/435 (38%), Gaps = 70/435 (16%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 211 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 270
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 271 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 330
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 331 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 390 HNSLLVLENE-VDAELA--VLPFKP-----------ISMKVLQCSFLSGKKLQKVQPLLK 435
+L+ L V + ++ KP + ++ Q +F + + L +
Sbjct: 346 EKNLVTLPGYCVSGTIGHKLMCGKPTRVDYEDTHIDVRCQIHQLAFSPHTDSKGIMDLTE 405
Query: 436 ILQPKLVLFPEEWRTHVSF-----SDVTSFSVSHYSENETIHIPS---LKESAELEIAAD 487
L PK V+ + ++F + NE++ IP+ LK SA
Sbjct: 406 FLSPKNVILVHGEKPQMAFLKERIESELGMPCYYPGNNESVSIPTTQNLKMSATERFITG 465
Query: 488 IASKFQWRMLKQKKL 502
A + R L ++ L
Sbjct: 466 CAVEQGKRSLHKRNL 480
>gi|170595519|ref|XP_001902415.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia
malayi]
gi|158589929|gb|EDP28737.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia
malayi]
Length = 589
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 126 IKNCMKKVIAINIHEKIDVDNELSIRAFYAGHVLGA------------------------ 161
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 162 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 216
Query: 252 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 308
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 217 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 275
Query: 309 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
Y W ++ + + F H++ ++ I SP P ++
Sbjct: 276 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQSYI------ESPG-------PMVL 322
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 414
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 323 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRVREINL 382
Query: 415 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
V SF + + + L++ QP+ V+F
Sbjct: 383 GVEYMSFSAHADAKGIMQLIRDCQPRNVMF 412
>gi|327288530|ref|XP_003228979.1| PREDICTED: integrator complex subunit 11-like [Anolis carolinensis]
Length = 600
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 124/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E++E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ F E +LK PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSMGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|195143691|ref|XP_002012831.1| GL23717 [Drosophila persimilis]
gi|194101774|gb|EDW23817.1| GL23717 [Drosophila persimilis]
Length = 597
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I+ ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWINVGSQSVVYTGDYNMTPDRHLGAAWIDNARPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VARGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|195112455|ref|XP_002000788.1| GI10422 [Drosophila mojavensis]
gi|193917382|gb|EDW16249.1| GI10422 [Drosophila mojavensis]
Length = 597
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHECVL----KGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|196007172|ref|XP_002113452.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens]
gi|190583856|gb|EDV23926.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens]
Length = 596
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 119/307 (38%), Gaps = 46/307 (14%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
GP +M + P L RKI + G + +KDC+ KV+ + +
Sbjct: 87 DGPIYMTHPTKAICPILLEDYRKITVDRKGEK---NFFTSQMIKDCMKKVKAINLHQTVK 143
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L IKA+ +G +GA +++ ++ Y N + + +L++
Sbjct: 144 VDDDLEIKAYYAGHVLGAAMFLVKVGCESVLYTGDYNMTPDRHLGAAWIDKCRPNLLI-- 201
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
TE ++ D E + L+ E VE GG V
Sbjct: 202 -------TESTYATTIRDSKRCRER--DFLTKVHECVER-----------------GGKV 235
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP+ +G +L + + + +LK+PIY + + E+ Y W Q+ + F
Sbjct: 236 LIPVFALGRAQELCILLETYWDRMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRRTF 294
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
+F K I F + L++ P +VF+ L G ++ + ++W+ D
Sbjct: 295 VQHNMFEF------KHIKPF-----DRALIDNPNPMVVFATPGMLHGGLSLQIFKKWAPD 343
Query: 390 HNSLLVL 396
++++L
Sbjct: 344 DKNMVIL 350
>gi|402590428|gb|EJW84358.1| RNA-metabolising metallo-beta-lactamase [Wuchereria bancrofti]
Length = 579
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 97 IKNCMKKVIAINIHEKIDVDNELSIRAFYAGHVLGA------------------------ 132
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 133 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 187
Query: 252 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 308
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 188 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 246
Query: 309 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
Y W ++ + + F H++ ++ I SP P ++
Sbjct: 247 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQSYI------DSPG-------PMVL 293
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 414
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 294 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRMREINL 353
Query: 415 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
V SF + + + L++ QP+ V+F
Sbjct: 354 GVEYMSFSAHADAKGIMQLIRDCQPRNVMF 383
>gi|388507878|gb|AFK42005.1| unknown [Medicago truncatula]
Length = 534
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 150/408 (36%), Gaps = 66/408 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
SGP +M + L P L RK+ + G E H+ +C+ KV + +
Sbjct: 86 SGPVYMTYPIKALSPLMLEDYRKVMVDRRGEEEQFTSD---HIAECMKKVIAVDLKQTVQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G IGA + + + Y N D A Q L L
Sbjct: 143 VDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNMTP----DRHLGAAQIDRLRL-- 196
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SKY---AREREFLKAVHKC----VSGGGKV 234
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP +G +L + + E +LK+PIY S + + Y + W Q+ + +
Sbjct: 235 LIPTFALGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGW-TSQKIKDTY 293
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
S F K +H F + +++ PC++F+ L G ++ + + W+
Sbjct: 294 STHNAFDF------KNVHKF-----ERSMLDAPGPCVLFATPGMLIGGFSLEVFKHWAPS 342
Query: 390 HNSLLVLENEVDA-------------ELAVLPFKPISMK--VLQCSFLSGKKLQKVQPLL 434
+L+ L A ++ P I ++ + Q +F + + + L+
Sbjct: 343 EKNLVALPGYCMAGTVGHRLTSGKPTKVDTDPDTQIDVRCQIHQLAFSAHTDSKGIMDLV 402
Query: 435 KILQPKLVLF-----PEEWRTHVSFSDVTSFSVSHYSENETIHIPSLK 477
K L PK V+ P+ SH + NE + I S +
Sbjct: 403 KFLSPKHVMLVHGDKPKMVSLKERIDSELGIPCSHPANNEIVTISSTQ 450
>gi|195445135|ref|XP_002070189.1| GK11920 [Drosophila willistoni]
gi|194166274|gb|EDW81175.1| GK11920 [Drosophila willistoni]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|414881434|tpg|DAA58565.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 211 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 270
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 271 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 330
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 331 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 390 HNSLLVL 396
+L+ L
Sbjct: 346 EKNLVTL 352
>gi|357158307|ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Brachypodium distachyon]
Length = 553
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 159/454 (35%), Gaps = 99/454 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G+ IY+T + LM+E+ YR+ + Q+ +E++
Sbjct: 79 ALPYFTEVCGYHGPIYMTYPTKALAPLMLED-------YRKVMVDQRGEEEQY-SYEDI- 129
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
LR C+ KV + + N L+I+A+ +G
Sbjct: 130 -----LR-----------------------CMKKVIPVDLKQTIQVNRDLVIRAYYAGHV 161
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + Y N D A Q L L L TE +
Sbjct: 162 LGAAMVYAKVGDAAMVYTGDYNMTP----DRHLGAAQIERLKL-----DLLITESTYAKT 212
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E E L + C V GG VLIP +G +L
Sbjct: 213 IRDSKH---------------AREREFLKAVHKC----VSEGGKVLIPTFALGRAQELCI 253
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E +LKIPIY + + + Y + W ++ ++ +P F HV
Sbjct: 254 LLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKDSYTVQNPFDFKHV----- 308
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 403
H + +N PC++F+ + G ++ + +RW+ +L+ L A
Sbjct: 309 --------CHFERSFINDPGPCVLFATPGMISGGFSLEVFKRWATSDKNLVTLPGYCVAG 360
Query: 404 L---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
++ KP + ++ Q SF + + L + L P V+
Sbjct: 361 TIGHKLMSGKPTRIDIDKDTHVDVRCQIHQLSFSPHTDSKGIMDLTEFLSPNHVILVHGE 420
Query: 449 RTHVSF-----SDVTSFSVSHYSENETIHIPSLK 477
+ ++F S + + NET+ IP+ +
Sbjct: 421 KPQMAFLKDRIESELGMSCYYPANNETVSIPTTQ 454
>gi|312621851|ref|YP_004023464.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202318|gb|ADQ45645.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 821
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 219 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
I +S++ D N N+EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRNFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G +++ + FM+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNFMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 334 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F ++ +I +KK + +++ +PC++ S L GP++ + + N
Sbjct: 288 IFLADNINVISDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQNQN 339
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|195503187|ref|XP_002098546.1| GE23879 [Drosophila yakuba]
gi|194184647|gb|EDW98258.1| GE23879 [Drosophila yakuba]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|312083284|ref|XP_003143797.1| RNA-metabolising metallo-beta-lactamase [Loa loa]
gi|307761039|gb|EFO20273.1| RNA-metabolising metallo-beta-lactamase [Loa loa]
Length = 644
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 181 IKNCMKKVIAINIHEKIDIDNELSIRAFYAGHVLGA------------------------ 216
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 217 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 271
Query: 252 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 308
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 272 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 330
Query: 309 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
Y W ++ + + F H++ ++ SP P ++
Sbjct: 331 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQS------YTDSPG-------PMVL 377
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 414
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 378 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRMREINL 437
Query: 415 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
V SF + + + L++ QPK V+F
Sbjct: 438 GVEYMSFSAHADAKGIMQLIRDCQPKNVMF 467
>gi|194906134|ref|XP_001981318.1| GG11690 [Drosophila erecta]
gi|190655956|gb|EDV53188.1| GG11690 [Drosophila erecta]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|21358523|ref|NP_651721.1| integrator 11 [Drosophila melanogaster]
gi|7301822|gb|AAF56931.1| integrator 11 [Drosophila melanogaster]
gi|16768852|gb|AAL28645.1| LD08814p [Drosophila melanogaster]
gi|220943570|gb|ACL84328.1| CG1972-PA [synthetic construct]
gi|220953494|gb|ACL89290.1| CG1972-PA [synthetic construct]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|346472285|gb|AEO35987.1| hypothetical protein [Amblyomma maculatum]
Length = 510
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G+S IY+T I +++E+ YR+ + E
Sbjct: 47 ALPYMTEMVGYSGPIYMTHPTKAICPILLED-------YRKITVDRKG---------ETN 90
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
SA+ ++DC+ KV + + + L IKA+ +G
Sbjct: 91 FFTSAM---------------------IRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 129
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 130 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWVDKCRPDLLI---------TESTYATT 180
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C + GG VLIP+ +G +L
Sbjct: 181 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 221
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + + +L++PIY + E+ Y W Q+ K F + F H+K
Sbjct: 222 LLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 280
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 281 -------------RAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPFEANMVIM 321
>gi|356530858|ref|XP_003533996.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 2 [Glycine max]
Length = 742
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 138/365 (37%), Gaps = 92/365 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKRLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 161
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 218
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
SF + N+L+N + ++ + +++AGG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGGNHLFNLKTLRAGGNVLLPVDTVGR 244
Query: 279 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 331
L+L+ + ++ +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 245 VLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 302
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 303 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVK 350
Query: 392 SLLVL 396
+L++
Sbjct: 351 NLVLF 355
>gi|91086147|ref|XP_969343.1| PREDICTED: similar to CG1972 CG1972-PA [Tribolium castaneum]
gi|270009886|gb|EFA06334.1| hypothetical protein TcasGA2_TC009205 [Tribolium castaneum]
Length = 595
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 132/355 (37%), Gaps = 83/355 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+S IY+T I +++E++
Sbjct: 76 ALPYMSEMVGYSGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+++ + G + +KDC+ KV + + + + IKA+ +G
Sbjct: 108 ------RKVSVEKKGDQ---NFFTSQMIKDCMKKVIAVTLHQSLMVDNEIEIKAYYAGHV 158
Query: 165 IGACN-WIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQS 223
+GA WI GA+ ++ Y N + + DL++ +E +
Sbjct: 159 LGAAMFWIRVGAQ-SVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYAT 208
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
+ D + E + L + C + GG VLIP+ +G +L
Sbjct: 209 TIRDS---------------KRCRERDFLKKVHEC----MDRGGKVLIPVFALGRAQELC 249
Query: 284 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLI 341
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 250 ILLETYWERMNLKAPVYFALGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPF 308
Query: 342 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I + P +VF+ L G ++ + ++W+ + N+++++
Sbjct: 309 DRSYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|195062087|ref|XP_001996130.1| GH14325 [Drosophila grimshawi]
gi|193891922|gb|EDV90788.1| GH14325 [Drosophila grimshawi]
Length = 597
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYAGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|414881433|tpg|DAA58564.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 211 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 270
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 271 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 330
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 331 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 390 HNSLLVL 396
+L+ L
Sbjct: 346 EKNLVTL 352
>gi|356530856|ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 1 [Glycine max]
Length = 736
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 138/365 (37%), Gaps = 95/365 (26%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKRLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 161
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 218
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
SF + N+L+N + ++ I +++AGG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILK---KTLRAGGNVLLPVDTVGR 241
Query: 279 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 331
L+L+ + ++ +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 242 VLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 299
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 300 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVK 347
Query: 392 SLLVL 396
+L++
Sbjct: 348 NLVLF 352
>gi|125773833|ref|XP_001358175.1| GA15164 [Drosophila pseudoobscura pseudoobscura]
gi|54637910|gb|EAL27312.1| GA15164 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VARGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|307215032|gb|EFN89859.1| Integrator complex subunit 11 [Harpegnathos saltator]
Length = 594
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 131/354 (37%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T M G++ IY+T I +++E++
Sbjct: 75 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDCI KV + + + L IKA+ +G
Sbjct: 107 ------RKVAVERKGES---NFFTSQMIKDCIKKVIAVTLHQSVMVDPDLEIKAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + +I Y N + + DL+ I +S+
Sbjct: 158 LGAAMFWVRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 204
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 205 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 249
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 250 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 308
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++ + ++W+ + ++++++
Sbjct: 309 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNESNMVIM 349
>gi|195341281|ref|XP_002037239.1| GM12816 [Drosophila sechellia]
gi|195574829|ref|XP_002105386.1| GD21460 [Drosophila simulans]
gi|194131355|gb|EDW53398.1| GM12816 [Drosophila sechellia]
gi|194201313|gb|EDX14889.1| GD21460 [Drosophila simulans]
Length = 597
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKNYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|168034228|ref|XP_001769615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679157|gb|EDQ65608.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 563
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/353 (18%), Positives = 130/353 (36%), Gaps = 79/353 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G+ IY+T + LM+E+ YR+ E G Q E+
Sbjct: 69 ALPYFTEVCGYDGPIYMTYPTKALAPLMLED-------YRKV--MVERKGEQ----EQFS 115
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
+L ++ C+ KV + + L +A+ +G
Sbjct: 116 VL------------------------QIQKCMKKVTAVDLRQTIKVGADLEFRAYYAGHV 151
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + + Y N + + + L+ I +S+
Sbjct: 152 LGAAMFWVKAGDDTVVYTGDYNMTPDRHLG-------------AAQIDRLEPDLLITEST 198
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
++ + + E E L + C V AGG VLIP+ +G +L
Sbjct: 199 YATTVRD-----------SKRAREREFLKAVHKC----VAAGGKVLIPVFALGRAQELCI 243
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E ++L +PIYI + + + Y + W ++ ++ + + F HV +
Sbjct: 244 LLDEYWERTNLDMPIYISAGLTMQANVYYKLLISWTNQKVKDTYVTRNTFDFKHVIPFER 303
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
KI + PC++F+ L G ++ + + W+ +++++L
Sbjct: 304 SKI-------------DAPGPCVLFATPGMLSGGLSLEVFKHWAPSESNMIIL 343
>gi|395840793|ref|XP_003793236.1| PREDICTED: integrator complex subunit 11 isoform 2 [Otolemur
garnettii]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|146296048|ref|YP_001179819.1| beta-lactamase domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409624|gb|ABP66628.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 821
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 121/284 (42%), Gaps = 57/284 (20%)
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKA--FSSGLDIGACNWIISGAKGNIAYISGSNFA 188
+V+D + + T+ +G + + IK F +G +GA I +G++ Y +F+
Sbjct: 114 NVEDLLDR--TITYGFNYTFEPLEGIKVTFFPAGHILGASMIFIQTQEGSVLYTG--DFS 169
Query: 189 SGHAMDFDYRAIQG--SDLILYSDLSSLDSTEDIDQSSFSD---DNNNWEE--LMNSLSN 241
+ + D +I D++ I +S++ D N N+EE L NS+
Sbjct: 170 TDKQLTVDKASIPKIRPDVV-------------ICESTYGDRLHTNRNYEEERLFNSIYE 216
Query: 242 YDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYI 301
+ + GG VLIP +G +++ + +M+ ++ ++I
Sbjct: 217 F--------------------ISKGGKVLIPAFAIGRAQEIILILRNYMKKKKVEFNVFI 256
Query: 302 ISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF--AHVKLIKEKKIHVFPAVHSPKLLM 359
V E + Y N P +L + +K+ G+ +F ++ +I +KK + +M
Sbjct: 257 DGMVREVIRVYKNN-PTFLSSRYYKKVLKGEEIFLSDNIDIITDKK--------QREEIM 307
Query: 360 NWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 403
+ +PC++ S L GP++ + + N+L+ + D E
Sbjct: 308 SSSDPCVIISSSGMLTGGPSVFYAEKLVENQNALIAITGYQDEE 351
>gi|10433243|dbj|BAB13943.1| unnamed protein product [Homo sapiens]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLKTFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|356559790|ref|XP_003548180.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 2 [Glycine max]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 169/450 (37%), Gaps = 114/450 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 161
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 218
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 219 DIDQSSFSDDNNNWEELMNSLSN--YDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRV 276
SF + N+L+N Y ++ + + I +++ GG+VL+P++ V
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGGNHLFNLVIKTLREGGNVLLPVDTV 244
Query: 277 GVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLF 329
G L+L+ + + +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 245 GRVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF 304
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 305 ----LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWAND 350
Query: 390 -HNSLLVLENEVDAELAVL-----PFKPISMKVLQCSFLSGKKL---QKVQPLLKILQPK 440
N +L E A LA + P K + + V + L G++L ++ Q +K K
Sbjct: 351 VKNLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALK 410
Query: 441 LVLFPEEWRTHVSFSDVTSFSVSHYSENET 470
L EE F SH ++N T
Sbjct: 411 ASLMKEE-----------EFKTSHGADNNT 429
>gi|303391170|ref|XP_003073815.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
gi|303302963|gb|ADM12455.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
Length = 496
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 52/309 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
SGP +M E+ P L RKI G+ S + +C+ KV T+ E
Sbjct: 84 SGPIYMTLPTKEVCPVLLDDFRKIVGGKGDSIFS-----YQDISNCMKKVVTISMNETYK 138
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 208
++ I + +G +GA + +S ++ Y S H + I+ LI
Sbjct: 139 HDENFYITPYYAGHVLGAAMFHVSVGDQSVVYTGDYSTTPDKHLGPASIKCIRPDLLITE 198
Query: 209 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 268
S S+ T D + V+E E L + C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAVSDC----IARGGR 229
Query: 269 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
VLIPI +G +L + + E + L+IP+Y S + E+ + + + K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLEIPVYFSSGLTEKANEIYKKFIGYTNETVKRKI 289
Query: 329 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
F + + H+K + + M+ + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------RYYMDNKGPMVLFASPGMLHSGMSLRIFKEWC 336
Query: 388 GDHNSLLVL 396
D +L+++
Sbjct: 337 EDEKNLVII 345
>gi|357624104|gb|EHJ75000.1| hypothetical protein KGM_18742 [Danaus plexippus]
Length = 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G++ IY+T I +++E++
Sbjct: 76 ALPYMSEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDCI KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTSQMIKDCIKKVTAVTLHQSVMVDNELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHECVEK-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 342
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFALGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ I +P + +VF+ L G ++++ ++W+ ++L++
Sbjct: 310 KSYI------DNPGAM-------VVFATPGMLHAGLSLNIFKKWAPYEQNMLIM 350
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 139/370 (37%), Gaps = 61/370 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L RK+ + G E H+K C++KV + +
Sbjct: 86 NGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTAD---HIKQCLNKVIAVDLKQTVQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA + + Y N D A Q L L
Sbjct: 143 VDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTP----DRHLGAAQIDRLQL-- 196
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SKY---AREREFLKVVHKC----VAGGGKV 234
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP +G +L + + E +LK+PIY + + + Y + W ++ +E
Sbjct: 235 LIPTFALGRAQELCLLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKETYT 294
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
S + K ++ F + L++ PC++F+ + G ++ + +RW+
Sbjct: 295 SRNAF-------DFKNVYTF-----DRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPC 342
Query: 390 HNSLLVLENEVDAEL---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLL 434
+L+ L A ++ KP + ++ Q SF + + L+
Sbjct: 343 EMNLVTLPGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLV 402
Query: 435 KILQPKLVLF 444
K L PK V+
Sbjct: 403 KFLSPKHVIL 412
>gi|397476280|ref|XP_003809535.1| PREDICTED: integrator complex subunit 11 isoform 3 [Pan paniscus]
Length = 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|328873132|gb|EGG21499.1| integrator complex subunit 11 [Dictyostelium fasciculatum]
Length = 645
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 185/490 (37%), Gaps = 108/490 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T M G+ IY+T I +++E+
Sbjct: 75 ALPYFTEMCGYDGPIYMTLPTKAIVPILLEDY---------------------------- 106
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI++ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 107 ------RKISVDRKG-ETNFFTPQM--IKDCMKKVIPIALHQTIKVDDELSIKAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + +L++ TE ++
Sbjct: 158 LGAAMFYAKVGEESVVYTGDYNMTPDRHLGSAWIDQVRPNLLI---------TETTYATT 208
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 209 IRDSKRGRER--DFLKRVHECVEK-----------------GGKVLIPVFALGRVQELCI 249
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
I + E +L +PIY +AE+ Y W Q+ ++ F +F K IK
Sbjct: 250 LIDSYWEQMNLNVPIYFSEGLAEKANFYYKLFITW-TNQKIKQTFVKRNMF-DFKHIKPF 307
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV--------- 395
H L + P ++F+ L G ++ + ++W+ + ++ +
Sbjct: 308 DRH----------LADAPGPMVLFATPGMLHAGASLEVFKKWAPNELNMTIIPGYCVVGT 357
Query: 396 -----LENEVDAELAVLPFKP---ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEE 447
L N ++ + K + K+ SF + + + L+K+ QPK VL
Sbjct: 358 VGNKLLSNAGGPQMVEIDKKTTLEVKCKIHNLSFSAHADAKGIMQLIKMSQPKNVLLVHG 417
Query: 448 WRTHVSF-SDVTS--FSVSHY--SENETIHIPSLKESAELEIAADIASKFQWRMLKQKKL 502
+ + + SD S F V Y + T++I ES++L I DI+SK +LK++ L
Sbjct: 418 EKEKMRYLSDKISKDFGVPCYFPANGVTVNI----ESSKL-IPIDISSK----LLKRQIL 468
Query: 503 NITRLKGRLF 512
++ + F
Sbjct: 469 EYSQANSKQF 478
>gi|374253828|ref|NP_001243392.1| integrator complex subunit 11 isoform 5 [Homo sapiens]
gi|119576639|gb|EAW56235.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_c
[Homo sapiens]
gi|119576644|gb|EAW56240.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_c
[Homo sapiens]
Length = 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|402852595|ref|XP_003891003.1| PREDICTED: integrator complex subunit 11 isoform 2 [Papio anubis]
Length = 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|426327396|ref|XP_004024504.1| PREDICTED: integrator complex subunit 11 isoform 4 [Gorilla gorilla
gorilla]
Length = 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|296206479|ref|XP_002750226.1| PREDICTED: integrator complex subunit 11 isoform 2 [Callithrix
jacchus]
Length = 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|194765324|ref|XP_001964777.1| GF23370 [Drosophila ananassae]
gi|190615049|gb|EDV30573.1| GF23370 [Drosophila ananassae]
Length = 597
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWDRMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|403297740|ref|XP_003939710.1| PREDICTED: integrator complex subunit 11 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVEHGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|356502382|ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Glycine max]
Length = 516
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 175/457 (38%), Gaps = 79/457 (17%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L RK+ + G E IA +C+ KV + +
Sbjct: 86 NGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSDQIA---ECMKKVIAVDLRQTVQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
L I+A+ +G IGA + + Y N D A Q L L
Sbjct: 143 VEKDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTP----DRHLGAAQIDRLRL-- 196
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SRY---AREREFLKAVHKC----VSCGGKV 234
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP +G +L + + E +LK+PIY + + + AY + W +Q+ + +
Sbjct: 235 LIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLIRW-TRQKIKDTY 293
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
S F K + F + +++ PC++F+ L G ++ + + W+
Sbjct: 294 SKHNAFDF------KNVQKF-----ERSMIDAPGPCVLFATPGMLSGGFSVEVFKHWAVS 342
Query: 390 HNSLLVL-----------------ENEVDAELAVLPFKPISMK--VLQCSFLSGKKLQKV 430
N+L+ L ++VD + P I ++ + Q +F + +
Sbjct: 343 ENNLVSLPGYCVPGTIGHKLMSDKHDKVDLD----PNTKIDVRCQIHQLAFSPHTDSKGI 398
Query: 431 QPLLKILQPK-LVLFPEEWRTHVSFSDV--TSFSVSHY--SENETIHIPS----LKESAE 481
L+ L PK ++L E S + + + Y + NET+ IPS E+++
Sbjct: 399 MDLVNFLSPKHVILVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSD 458
Query: 482 LEIAADIASKFQWRMLKQKKLNITRL-KGRLFVNHGK 517
I + ++ F ++ ++ R+ +G L + GK
Sbjct: 459 TFIRSCLSPNFTFQKCSSLQVEDERVAEGVLVLEKGK 495
>gi|119576641|gb|EAW56237.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_e
[Homo sapiens]
Length = 578
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 205 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 263
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 264 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 312
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 313 QIFRKWAGNEKNMVIM 328
>gi|359415409|ref|ZP_09207872.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit
[Candidatus Haloredivivus sp. G17]
gi|358034266|gb|EHK02708.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit
[Candidatus Haloredivivus sp. G17]
Length = 623
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 206 ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNY----DESVEEMEKLAFICSCAID 261
ILY+ + D+TE + ++ D N E M + S Y DE E S
Sbjct: 341 ILYTGDYNYDTTETLREA---DTNFQRVETMITESTYGGRDDEQTPREEANKKFLSKVKQ 397
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++ GG V++P+ VG ++L +A M+ S +YI + + +T PE+L
Sbjct: 398 TLSKGGKVIVPVFAVGRSQEVLALLADEMDRSYFDYNVYIDGMINDANALHT-AYPEFLS 456
Query: 322 KQRQEKLFSGDPLFAHVKLIKEKKIHVFP-AVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
+ Q+K++ + F K ++ P HS + + + CI+ + S+ GP +
Sbjct: 457 NKIQDKVYQDESPFL--------KDNIKPIGSHSERKEVFEDDACIILTTSGSITGGPVM 508
Query: 381 HLLRRWSGDHNSLLVL 396
L + + D ++ L+
Sbjct: 509 SYLEKEASDPDNSLIF 524
>gi|427785581|gb|JAA58242.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Rhipicephalus pulchellus]
Length = 587
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G+S +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYSGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + G A ++DC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSAMIRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFRIRVGSQSVVYTGDYNMTPDRHLGAAWLDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + +L++PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 304 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPFEANMVIM 350
>gi|39645207|gb|AAH13904.2| CPSF3L protein, partial [Homo sapiens]
Length = 429
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 56 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 114
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 115 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 163
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 164 QIFRKWAGNEKNMVIM 179
>gi|396082329|gb|AFN83939.1| putative beta-lactamase fold-containingexonuclease [Encephalitozoon
romaleae SJ-2008]
Length = 496
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 117/309 (37%), Gaps = 52/309 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M E+ P L RKI G+ S + +C+ KV T+ E
Sbjct: 84 NGPVYMTLPTKEVCPVLLDDFRKIVEGKGDSIF-----TYQDILNCMKKVTTINMNETYK 138
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 208
++ I + +G +GA + + ++ Y S H + ++ LI
Sbjct: 139 HDEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCVRPDLLITE 198
Query: 209 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 268
S S+ T D + V+E E L + C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAVSDC----IARGGR 229
Query: 269 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
VLIPI +G +L + + E + LKIP+Y S + E+ + + + K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLKIPVYFSSGLTEKANEIYKKFISYTNETVKRKI 289
Query: 329 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
F + + H+K + K M + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------KYYMENKGPMVLFASPGMLHSGMSLRMFKEWC 336
Query: 388 GDHNSLLVL 396
D +L+++
Sbjct: 337 EDEKNLVII 345
>gi|156403103|ref|XP_001639929.1| predicted protein [Nematostella vectensis]
gi|156227060|gb|EDO47866.1| predicted protein [Nematostella vectensis]
Length = 527
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + M G+ IY+T I +++E+ YR+ E G E
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 90
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 91 FFTSQM---------------------IKDCMKKVVPINLHQSIKVDDELEIKAYYAGHV 129
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + ++ Y N + + D+++ TE ++
Sbjct: 130 LGAVMFHMRVGTESVVYTGDYNMTPDRHLGSAWIDKCRPDILI---------TESTYATT 180
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L E++E+ GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETMEK-----------------GGKVLIPVFALGRAQELCI 221
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E +LK PIY + + E+ Y W ++ + + F H+K
Sbjct: 222 LLETYWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIKNTFVQRNMFEFEHIKPFDR 281
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I + P +VF+ L G ++ + ++W+ + N+++V+
Sbjct: 282 SYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWASNENNMVVI 321
>gi|401827835|ref|XP_003888210.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
gi|392999410|gb|AFM99229.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
Length = 496
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 120/309 (38%), Gaps = 52/309 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M E+ P L RKI +G G + + +C+ KV T+ E
Sbjct: 84 NGPIYMTLPTKEVCPVLLDDFRKI-VGAKGDNIFS----YQDIVNCMKKVTTISMSETYK 138
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 208
++ I + +G +GA + + ++ Y S H + ++ LI
Sbjct: 139 HDEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCVRPDLLITE 198
Query: 209 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 268
S S+ T D + V+E E L I C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAISDC----IARGGR 229
Query: 269 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 328
VLIPI +G +L + + E + LK+P+Y S + E+ + + ++K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLKVPVYFSSGLTEKANEIYKKFISYTNETVKKKI 289
Query: 329 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
F + + H+K + K M+ + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------KYYMDNEGPMVLFASPGMLHSGMSLRMFKEWC 336
Query: 388 GDHNSLLVL 396
D +L+++
Sbjct: 337 SDEKNLVII 345
>gi|409095356|ref|ZP_11215380.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus zilligii AN1]
Length = 648
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y EE EK + ++K GG VLIP VG +++ + + SL++PI
Sbjct: 396 NDYQMPREEAEKR--LMEVIHQTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGSLEVPI 453
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L K +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKNLREQIFHEGYNPFLNPIFKSVANGRERQD------- 505
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++++ + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIILVSYQSEGTLG 554
>gi|242053629|ref|XP_002455960.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor]
gi|241927935|gb|EES01080.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor]
Length = 558
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/481 (19%), Positives = 171/481 (35%), Gaps = 101/481 (20%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G+ IY+T + M+E+ + M+ R G EE +E++
Sbjct: 78 ALPYFTEICGYHGPIYMTYPTKALAPFMLEDYRKVTMDQR---GEEEQ-----YSYEDI- 128
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
LR C+ KV + + + L+I+A+ +G
Sbjct: 129 -----LR-----------------------CMKKVIPMDLKQTIQVDKDLVIRAYYAGHV 160
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
IGA + Y N + G+ I + L L I +S+
Sbjct: 161 IGAAMIYAKVGDAAMVYTGDYNMTPDRHL--------GAAQIDHLKLDLL-----ITEST 207
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
++ + + E E L + C V GG VLIP +G +L
Sbjct: 208 YAKTIRD-----------SKHAREREFLKAVHKC----VSGGGKVLIPTFALGRAQELCM 252
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E LK+PIY + + + Y + W ++ ++ +P F HV
Sbjct: 253 LLDDYWERMDLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHAVHNPFDFKHV----- 307
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----EN 398
H + +N PC++F+ + G ++ ++W+ +L+ L
Sbjct: 308 --------CHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLITLPGYCVSG 359
Query: 399 EVDAELAV-----LPFKPISMKVL----QCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 449
+ +L + +K I + V Q +F + + L + L PK V+ +
Sbjct: 360 TIGHKLMCGKPTRIDYKDIHIDVRCQIHQLAFSPHTDSKGIMDLTEFLSPKHVILVHGEK 419
Query: 450 THVSF-----SDVTSFSVSHYSENETIHIPS---LKESAELEIAADIASKFQWRMLKQKK 501
++F + NE++ IP+ LK SA A + R L ++
Sbjct: 420 PQMAFLKERIESELGMPCYYPGNNESVSIPTTQNLKMSATERFITSCAVEQGKRSLHKRN 479
Query: 502 L 502
L
Sbjct: 480 L 480
>gi|426327398|ref|XP_004024505.1| PREDICTED: integrator complex subunit 11 isoform 5 [Gorilla gorilla
gorilla]
Length = 502
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|119576647|gb|EAW56243.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_i
[Homo sapiens]
Length = 502
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|374253826|ref|NP_001243391.1| integrator complex subunit 11 isoform 4 [Homo sapiens]
Length = 502
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 381 HLLRRWSGDHNSLLVL 396
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|222529916|ref|YP_002573798.1| beta-lactamase domain-containing protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222456763|gb|ACM61025.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM
6725]
Length = 821
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 219 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
I +S++ D N N+EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRNFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 334 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFFADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|241245173|ref|XP_002402434.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215496345|gb|EEC05985.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 596
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYAGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFHIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + +LK+PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETYWDRMNLKVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 304 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPVEGNMVIM 350
>gi|442751667|gb|JAA67993.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Ixodes ricinus]
Length = 596
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G++ +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYAGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFHIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E + L+ + ++E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLTKVHDCIDE-----------------GGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + +LK+PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETYWDRMNLKVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDF------K 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 304 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPVEGNMVIM 350
>gi|313238583|emb|CBY13629.1| unnamed protein product [Oikopleura dioica]
Length = 618
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 146/386 (37%), Gaps = 58/386 (15%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV+ + + + L IKA+ +G +GA + I+ ++ Y N
Sbjct: 130 IKNCMRKVEIVGLHQVINVDDELSIKAYYAGHVLGAAMFKITVGDESVLYTGDFNMTPDR 189
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ + A + +L S+ + + D +S E +
Sbjct: 190 HLGAAW-ADRCKPTVLISESTYATTIRDSKRS-----------------------RERDF 225
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
L I C V+ GG VLIP+ +G +L + + + L +P+Y + +AE+
Sbjct: 226 LKKIHRC----VENGGKVLIPVFALGRAQELCILLEQYWDRMKLNVPVYFTAGLAEKATN 281
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
Y W EK+ S F L K I F ++ MN P + F+
Sbjct: 282 YYKLFVNWT----NEKIKSS---FVERNLFDFKYIKAF----QKEIHMNQSGPQVCFATP 330
Query: 372 WSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAV---------LPFKPIS----MKVLQ 418
L G ++ + + W D + +++ A F ++ +KV
Sbjct: 331 GMLHAGMSLEIFQNWCTDEKNCIIMPGYCVAGTVGHRLLHGERHFKFNGVNVTSRIKVEY 390
Query: 419 CSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF-----SDVTSFSVSHYSENETIHI 473
SF + + + ++K+ +PK V+F + F + ET++I
Sbjct: 391 MSFSAHADAKGIMQIIKMTEPKNVMFVHGEAAKMEFLAKKVQKDMGLPCFTPANGETVNI 450
Query: 474 PSLKESAELEIAADIASKFQWRMLKQ 499
S +++I +D+A K R L +
Sbjct: 451 -SCPPQIKVKIESDLARKIMKRSLNR 475
>gi|223997482|ref|XP_002288414.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975522|gb|EED93850.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 557
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 154/397 (38%), Gaps = 84/397 (21%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP+ T GF +I++T + +L++ + + + M + GA++ + E
Sbjct: 73 LPYFTERTGFKGRIFMTHPTKAVIRLLLGDYLKLMMMKKGSGGADKDDNQDVLYTE---- 128
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN--GILIIKAFSSGL 163
A ++ C+ K++ + + + N L A ++G
Sbjct: 129 ------------------------ADLQSCVDKIELIDYHQTIDLNLPSGLKFHALNAGH 164
Query: 164 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY---SDLSSLDSTEDI 220
+GA + I ++ Y ++M+ D R + ++L Y DL ++ST +
Sbjct: 165 VLGAAMFFIEVGGRSVLY------TGDYSMEED-RHLMAAELPKYHASPDLLIVESTYGV 217
Query: 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 280
+ E+ A V GG LIP+ +G
Sbjct: 218 QVHA----------------------SRAEREARFTGTIERIVTGGGRCLIPVFALGRAQ 255
Query: 281 QLLEQIAIF-MECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAH 337
+LL + + E L+ IPIY S +A L T + + + ++ G+P F+H
Sbjct: 256 ELLLILDEYWQEHPHLQSIPIYYASKMASRALRVYQTYANMMNARIRAQMDLGNPFHFSH 315
Query: 338 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 396
++ +K ++ F + + P +VF+ L+ G + L RW+GD N +++
Sbjct: 316 IRNLKSIDVNNF----------DDRGPSVVFASPGMLQSGVSRQLFDRWAGDPKNGVMLA 365
Query: 397 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 433
V+ LA K I + + L G++ QPL
Sbjct: 366 GYAVEHTLA----KEIMSQPKEVVTLEGRR----QPL 394
>gi|427779771|gb|JAA55337.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Rhipicephalus pulchellus]
Length = 621
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/371 (17%), Positives = 132/371 (35%), Gaps = 81/371 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP++T M G+S +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYSGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + G A ++DC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSAMIRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFRIRVGSQSVVYTGDYNMTPDRHLGAAWLDKCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAF-----------------ICSCAIDSVKAGG 267
D E + L+ + +++ K+ + D + GG
Sbjct: 210 IRDSKRCRER--DFLTKVHDCIDKGGKVLIPVFXTTIRDSKRCRERDFLTKVHDCIDKGG 267
Query: 268 SVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 327
VLIP+ +G +L + + + +L++PIY + E+ Y W Q+ K
Sbjct: 268 KVLIPVFALGRAQELCILLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRK 326
Query: 328 LFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRR 385
F + F H+K + ++ P +VF+ L G ++ + ++
Sbjct: 327 TFVQRNMFDFKHIKPFD-------------RAFIDNPGPMVVFATPGMLHAGLSLQIFKK 373
Query: 386 WSGDHNSLLVL 396
W+ +++++
Sbjct: 374 WAPFEANMVIM 384
>gi|391330858|ref|XP_003739869.1| PREDICTED: integrator complex subunit 11-like [Metaseiulus
occidentalis]
Length = 601
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/418 (17%), Positives = 145/418 (34%), Gaps = 99/418 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEEL--ICMNMEYRQFYGAEESSGPQWMKWEE 102
LPF++ M G++ IY+T I +++E+ IC++ + Q + ++
Sbjct: 76 ALPFMSEMIGYTGPIYMTHPTKAICPILLEDFRKICVDKKGEQNFFSQ------------ 123
Query: 103 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 162
++DC+ KV E + L IKA+ +G
Sbjct: 124 ---------------------------GMIRDCMKKVIPCNLHETIKVDSELEIKAYYAG 156
Query: 163 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 222
+GA + I +I Y N + + DL++ TE
Sbjct: 157 HVLGAAMFHIKVGHISIVYTGDYNMTPDRHLGAAWIDRCRPDLLI---------TESTYA 207
Query: 223 SSFSDDNNNWE-ELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++ D E + +N + D ++ GG VLIP +G +
Sbjct: 208 TTIRDSKRCRERDFLNKVH--------------------DCIERGGKVLIPAFALGRAQE 247
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKL 340
L + + E +LK PIY + + E+ Y W ++ + + F H+K
Sbjct: 248 LCILLETYWERMNLKCPIYFAAGLTEKATNYYKMFITWTNQKIRNTFVDHNMFDFKHIKP 307
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL------ 394
I + P +VF+ L G ++ + ++W+ +++
Sbjct: 308 FDRAYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPFEENMVIMPGYC 354
Query: 395 --------VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+L E+ F + + V SF + + + L++ +PK VL
Sbjct: 355 VSGTVGAKILNGARRVEIEKGNFIDVKLSVEYLSFSAHADAKGIMQLIRQCEPKNVLL 412
>gi|255553723|ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223542884|gb|EEF44420.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 740
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 132/359 (36%), Gaps = 82/359 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + G SA +Y TE R+G L M Y Q+ + S ++++
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKAVSEFDLFSLDDID 120
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
+ ++ ++ G G GI+I + L
Sbjct: 121 SAFQNITRLTYSQNHHLSGKG-------------------------EGIVIAPHVAGHL- 154
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTEDID 221
+G W I+ ++ Y A+DF++R + G+ L
Sbjct: 155 LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL---------------- 188
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
SF + N+LSN + + F+ + +++AGG+VL+P++ G L+
Sbjct: 189 -ESFVRPAVLITDAYNALSN--QPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTAGRVLE 245
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP---LFAHV 338
LL + F L PI+ ++ V+ + Y + EW+ + + L HV
Sbjct: 246 LLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAFLLKHV 305
Query: 339 K-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
LI + ++ P V P +V + SL G + + W+ D +L++
Sbjct: 306 TLLINKNELDNAPNV-----------PKVVLASMASLEAGFSHDIFVEWAADVKNLVLF 353
>gi|384484008|gb|EIE76188.1| hypothetical protein RO3G_00892 [Rhizopus delemar RA 99-880]
Length = 657
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 41/287 (14%)
Query: 128 CIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSSGLDIGACNWIISGAKGNIAYISG 184
+ V + K+ LR+ + G + I A+++ +G W I I Y
Sbjct: 67 TLEDVDNAFDKITPLRYSQPFSLPGKCQGITITAYAAAHTVGGTIWKIKQDTDEIVY--- 123
Query: 185 SNFASGHAMDFDYRAIQGSD-LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 243
A+DF++R D +L+S LDS S D N + + +
Sbjct: 124 -------AVDFNHRKEYHLDGTVLHSGGVVLDSL--TRPSLLITDAYNSQVVHPA----- 169
Query: 244 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIIS 303
++ A + + S+ GGSVL+P + L+L + + L P+ ++S
Sbjct: 170 ----RKDRYAAMFDTMLTSLNKGGSVLLPTDSSARVLELAYLLDQHWSQNQLNYPLIMLS 225
Query: 304 SVAEELLAYTNTIPEWLCKQRQEKLFSG--DPL-FAHVKLIKEKKIHVFPAVHSPKLLMN 360
+ + + + + EW+ ++ K +P F +V+L H + L N
Sbjct: 226 NTSYHTVHFAKIMLEWMGEELTRKFSQSRENPYEFKYVRL-----------CHKIEDLDN 274
Query: 361 WQEPCIVFSPHWSLRLGPTIHLLRRW--SGDHNSLLVLENEVDAELA 405
+ P IV + H SL G L RW + N+L++ + LA
Sbjct: 275 YPGPKIVMASHHSLETGFARELFLRWMTNDPQNTLILTDRSAPGTLA 321
>gi|312127068|ref|YP_003991942.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777087|gb|ADQ06573.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
hydrothermalis 108]
Length = 822
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + I IK FS
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFS 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDKASVPKIRPDIV------------ 189
Query: 219 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
I +S++ D N ++EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 334 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|356559788|ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 1 [Glycine max]
Length = 738
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 167/448 (37%), Gaps = 115/448 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 161
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 218
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 219 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 278
SF + N+L+N + ++ I +++ GG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILK---KTLREGGNVLLPVDTVGR 241
Query: 279 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 331
L+L+ + + +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 242 VLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 299
Query: 332 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-H 390
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 300 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVK 347
Query: 391 NSLLVLENEVDAELAVL-----PFKPISMKVLQCSFLSGKKL---QKVQPLLKILQPKLV 442
N +L E A LA + P K + + V + L G++L ++ Q +K K
Sbjct: 348 NLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALKAS 407
Query: 443 LFPEEWRTHVSFSDVTSFSVSHYSENET 470
L EE F SH ++N T
Sbjct: 408 LMKEE-----------EFKTSHGADNNT 424
>gi|302846726|ref|XP_002954899.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f.
nagariensis]
gi|300259874|gb|EFJ44098.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f.
nagariensis]
Length = 477
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 260 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 319
+++V AGG VLIP +G +LL I E + L++PIY S++A L Y + W
Sbjct: 247 VETVAAGGKVLIPTFAMGRAQELLMLITDCWERNGLQVPIYFSSAMAARALVYYQLLLNW 306
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
+F +V + IH +M P ++F+ ++ G
Sbjct: 307 TNANHIHC------VFVNVHICVCTHIHT-------TWMMLAPGPALLFASPGNIASGVA 353
Query: 380 IHLLRRWSGDHNSLLVLEN 398
+ R W+G +LLVL
Sbjct: 354 LEAFRSWAGSSKNLLVLAG 372
>gi|119576637|gb|EAW56233.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b
[Homo sapiens]
Length = 329
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 205 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 263
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 264 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 312
Query: 381 HLLRRWSGDHNSLL 394
+ R+W+G+ +++
Sbjct: 313 QIFRKWAGNEKNMV 326
>gi|224108267|ref|XP_002314781.1| predicted protein [Populus trichocarpa]
gi|222863821|gb|EEF00952.1| predicted protein [Populus trichocarpa]
Length = 639
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 160/451 (35%), Gaps = 97/451 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G++ IY+T + LM+E+
Sbjct: 75 ALPYFTEVCGYNGPIYMTYPTKALAPLMLEDF---------------------------- 106
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RK+ + G E H+ C+ KV + + + L I+A+ +G
Sbjct: 107 ------RKVLVDRRGEEEQFTS---LHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGHV 157
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + + Y N D A Q L L L TE ++
Sbjct: 158 LGAAMFYAKVGDSAMVYTGDYNMTP----DRHLGAAQIDRLEL-----DLLITESTYATT 208
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D S Y E E L + C V GG VLIP +G +L
Sbjct: 209 IRD------------SKY---AREREFLKAVHEC----VAGGGKVLIPTFALGRAQELCI 249
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + E +LK+PIY + + + Y + W ++ +E +A K
Sbjct: 250 LLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKVKET-------YATRNAFDFK 302
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL 404
+H F + L+N PC++F+ + G ++ + ++W+ +L+ L A
Sbjct: 303 HVHNF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCVAGT 357
Query: 405 A---VLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPK-LVLFPEEW 448
++ KP + ++ Q SF + + L K L P+ ++L E
Sbjct: 358 VGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEK 417
Query: 449 RTHVSFSD--VTSFSVSHY--SENETIHIPS 475
VS + T + Y + + +HIPS
Sbjct: 418 PKMVSLKERIQTELRIPCYLPANCDAVHIPS 448
>gi|71661559|ref|XP_817799.1| cleavage and polyadenylation specificity factor [Trypanosoma cruzi
strain CL Brener]
gi|70883012|gb|EAN95948.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 625
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 15 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 66
Query: 192 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
R + G+++ YS D+ +ST I + E
Sbjct: 67 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELESR----------------------EE 104
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 308
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 105 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 164
Query: 309 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 165 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 211
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 212 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 252
>gi|115479027|ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza sativa Japonica Group]
gi|113631340|dbj|BAF25021.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|218202115|gb|EEC84542.1| hypothetical protein OsI_31281 [Oryza sativa Indica Group]
gi|222641522|gb|EEE69654.1| hypothetical protein OsJ_29268 [Oryza sativa Japonica Group]
Length = 559
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 162/463 (34%), Gaps = 102/463 (22%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G+ +Y+T + LM+E+ + +++R G EE +E++
Sbjct: 78 ALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHR---GEEEQ-----YSYEDI- 128
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
LR C+ KV L + + L I+A+ +G
Sbjct: 129 -----LR-----------------------CMRKVIPLDLKQTIQVDKDLSIRAYYAGHV 160
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I Y N D A Q L L L TE +
Sbjct: 161 LGAAMIYAKVGDAAIVYTGDYNMTP----DRHLGAAQIDRLKL-----DLLITESTYAKT 211
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E E L + C V GG VLIP +G +L
Sbjct: 212 VRDSKH---------------AREREFLKAVHKC----VSGGGKVLIPAFALGRAQELCI 252
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 343
+ + E +LKIPIY + + + Y + W ++ + +P F HV
Sbjct: 253 LLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKNSYTVHNPFDFKHV----- 307
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 403
H + +N PC++F+ + G ++ + ++W+ +L+ L A
Sbjct: 308 --------CHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLVTLPGYCVAG 359
Query: 404 L---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
++ KP + ++ Q SF + + L + L P V+
Sbjct: 360 TIGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSHVILVHGE 419
Query: 449 RTHVSF-----SDVTSFSVSHYSENETIHIPSLKESAELEIAA 486
+ ++F + + NET+ IP+ S L+I A
Sbjct: 420 KPQMAFLKERIESELGMQCCYPANNETVSIPT---SQNLKINA 459
>gi|358060736|dbj|GAA93507.1| hypothetical protein E5Q_00148 [Mixia osmundae IAM 14324]
Length = 1378
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 263 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWL 320
+K GG VL+P GV +LL + F E + + PIY ++S+A +L
Sbjct: 272 LKRGGKVLLPAFSSGVSQELLLVLDDFWEKNPDLHEFPIYYVTSLASRVLKVYRQHISSQ 331
Query: 321 CKQRQEKLFSGD-PL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
++ Q++ SGD P F + +KE + S + + + PC+V + L+ G
Sbjct: 332 SQKIQQRAASGDNPYDFGKGRFVKE--------LRSIRRGVADKSPCVVVATPGMLQPGT 383
Query: 379 TIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFK---------PISMKVLQCSFLSG 424
+ LL RW+GD + L+L E + +L P + P + V SF
Sbjct: 384 SRELLERWAGDRRNGLILCGYSVEGSLARDLQAEPDEFMSVEGRRIPRRISVDVISFAQH 443
Query: 425 KKLQKVQPLLKILQP-KLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 483
+ + ++P L+L E R + + + ++ P + ++
Sbjct: 444 VDFSQNASFIDAVRPANLILVHGEARNVTTLQAALQKIYADKKDEMKVYAPRNLQPIKIR 503
Query: 484 IAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL 521
IA + ++ + K+ + + G LFV ++ LL
Sbjct: 504 IARNQVARAVGGLAKEHLPDGAPVGGLLFVKDAQYTLL 541
>gi|21703178|gb|AAM76086.1|AF483006_1 FLJ10871-like protein [Boltenia villosa]
Length = 202
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 360 NWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENEVDAELAVLPFKPISMKVLQ 418
+++EPCIVF+ H SLR G +H + W NS++ +E A+ PF+P+ M+
Sbjct: 7 SFKEPCIVFAGHPSLRFGDAVHFVEMWRKSAANSIIFVEPNFPYLEALAPFQPMQMRAFH 66
Query: 419 CSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448
+ LL LQ K V+ P +
Sbjct: 67 FEIDTRTNHTGSSMLLNDLQSKNVIVPASY 96
>gi|126458658|ref|YP_001054936.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis
JCM 11548]
gi|126248379|gb|ABO07470.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 634
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++V GG VLIP G ++L + ME + ++PIY+ + E L Y P +
Sbjct: 393 ETVAKGGKVLIPAFSTGRGQEILYILNKMMEGGLIPRVPIYVDGMIVETLNVYL-MYPHY 451
Query: 320 LCKQRQEKLFSGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++SG F + +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEIYSGVNPFTTSGAVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + L+
Sbjct: 512 PILDYFAQLAPDERNKLIF 530
>gi|405958713|gb|EKC24813.1| Integrator complex subunit 11 [Crassostrea gigas]
Length = 575
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M G+ IY+T I +++E+
Sbjct: 49 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDY---------------------------- 80
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
RKI + G E +K+C+ KV + E + L IKA+ +G
Sbjct: 81 ------RKITVERKGEE---NFFTSEMIKNCMKKVVVVNLHETKQVDEELEIKAYYAGHV 131
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA + I + ++ Y N + + DL++ TE ++
Sbjct: 132 LGAAMFHIKVGQQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 182
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D + E + L + C V+ GG VLIP+ +G +L
Sbjct: 183 IRDS---------------KRCRERDFLKKVHDC----VEKGGKVLIPVFALGRAQELCI 223
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + ++K+PIY + E+ Y W Q+ +K F +F K
Sbjct: 224 LLESYWDRMNIKVPIYFSLGLTEKANHYYKLFITW-TSQKIKKTFVQRNMFEF------K 276
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F + ++ P +VF+ L G ++ + ++W+ + +++++
Sbjct: 277 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPNELNMVIM 323
>gi|18312205|ref|NP_558872.1| mRNA 3'-end processing factor [Pyrobaculum aerophilum str. IM2]
gi|18159643|gb|AAL63054.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum
str. IM2]
Length = 634
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
D+V GG VLIP G ++L + ME + ++P+Y+ + E L Y P +
Sbjct: 393 DAVTRGGKVLIPAFSTGRGQEILYILNKMMEGGLIPRVPVYVDGMIVETLNVYL-MYPHY 451
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + L+
Sbjct: 512 PVVDYFAQLAHDERNKLIF 530
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 263
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 264 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 324 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 383 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 427
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDA 395
Query: 428 QKVQPLLKILQPKLVLF 444
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|407411604|gb|EKF33594.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi marinkellei]
Length = 763
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 153 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 204
Query: 192 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
R + G+++ YS D+ +ST I + E
Sbjct: 205 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 242
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 308
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 243 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 302
Query: 309 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 303 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 349
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 350 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 390
>gi|289191606|ref|YP_003457547.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp.
FS406-22]
gi|288938056|gb|ADC68811.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp.
FS406-22]
Length = 421
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ +G ++L I +M LK +PIY S+ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYMRSGGLKEVPIYTDGSLIHATAVYMSYI-NW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP--KLLMNWQEPCIVFSPHWSLRLG 377
L + +K + E +I+ F + L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGEIKKADENLVFN-KEPCIIVSTSGMVQGG 307
Query: 378 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 424
P + L+ N L++ + + L + PFK PI KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPIRGKVVKIEFSAHG 367
Query: 425 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 455
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|443694305|gb|ELT95478.1| hypothetical protein CAPTEDRAFT_151615 [Capitella teleta]
Length = 600
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+++ M GF IY+T I +++E+ YR+ E G E
Sbjct: 76 ALPYMSEMVGFDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 119
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
S + +K C+ K + + + L IKA+ +G
Sbjct: 120 FFTSEM---------------------IKSCMKKTIAMNLHQTIQVDDELEIKAYYAGHV 158
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA I + ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMIHIRVGEQSVVYTGDYNMTPDRHLGAAWIDRCRPDLLI---------TESTYATT 209
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
D E ++ + V D+V GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER------DFLKKVH-------------DAVDKGGKVLIPVFALGRAQELCI 250
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 344
+ + + +LK+PIY + E+ Y W ++ + F + K
Sbjct: 251 LLETYWDRMNLKVPIYFSMGLTEKANHYYKMFITWTNQKIKNT-------FVQRNMFDFK 303
Query: 345 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
I F V++ + P +VF+ L G ++ + ++W G +++++
Sbjct: 304 HIKPFDKVYA-----DNPGPMVVFATPGMLHGGLSLQIFKKWCGGEKNMVIM 350
>gi|124505029|ref|XP_001351256.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium falciparum 3D7]
gi|3758842|emb|CAB11127.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium falciparum 3D7]
Length = 1017
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 85/379 (22%)
Query: 98 MKWEELELLPSALRKIALGEDGSE--LGGGCPCIA---------HVKDCISKVQTLRFGE 146
MKWE+ + R+I + + S+ L CI ++ +CI KV L+ E
Sbjct: 222 MKWEK----KNFERQIKMLNEKSDELLNYNINCIKKDPWNINEDNIYNCIDKVIGLQINE 277
Query: 147 EACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLI 206
G + I + +G +GAC + I ++ Y DY I L
Sbjct: 278 TFEL-GDMSITPYYAGHVLGACIYKIEVRNFSVIYTG------------DYNTIPDKHL- 323
Query: 207 LYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAG 266
+++ SL+ I +S+++ Y ++ +L +C+ + V G
Sbjct: 324 GSANIPSLNPEIFISESTYA--------------TYVRPTKKASELE-LCNLVHECVHKG 368
Query: 267 GSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL---C-K 322
G VLIP+ +G +L + + + + PIY + E Y W+ C
Sbjct: 369 GKVLIPVFAIGRAQELSILLDDYWKKMKIHYPIYFGCGLTENANKYYKIYSSWINSSCMS 428
Query: 323 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL--LMNWQEPCIVFSPHWSLRLGPTI 380
+E LF FA++ SP L +N + P ++F+ L G ++
Sbjct: 429 NEKENLFD----FANI---------------SPFLNNYLNEKRPMVLFATPGMLHTGLSL 469
Query: 381 HLLRRWSGDHNSLLVL-----ENEVDAELAVLPFKPISM----------KVLQCSFLSGK 425
+ W+G+ +L+VL + V +L ++ K IS+ K++ SF +
Sbjct: 470 KAFKAWAGNPQNLIVLPGYCVQGTVGHKL-IMGEKQISLDGTTYIKVLCKIIYLSFSAHA 528
Query: 426 KLQKVQPLLKILQPKLVLF 444
+Q L+K + PK V+F
Sbjct: 529 DSNGIQQLIKHVSPKNVIF 547
>gi|312792978|ref|YP_004025901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180118|gb|ADQ40288.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 822
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 219 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
I +S++ D N ++EE L N+++ + V GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVVSQGGKVLIPA 228
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 334 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIVSSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|50363261|gb|AAT75333.1| cleavage polyadenylation specificity factor CPSF73 [Trypanosoma
cruzi]
Length = 762
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 192 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 308
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 309 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|19074744|ref|NP_586250.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon
cuniculi GB-M1]
gi|19069386|emb|CAD25854.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon
cuniculi GB-M1]
gi|449329879|gb|AGE96147.1| hypothetical protein ECU10_1350 [Encephalitozoon cuniculi]
Length = 496
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 116/308 (37%), Gaps = 52/308 (16%)
Query: 94 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
GP +M E+ P L RKI G+ S + +C+ KV T+ E +
Sbjct: 85 GPIYMTLPTKEVCPVLLDDFRKIVAGKGDSIF-----TYQDISNCMKKVVTISMNETYKH 139
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILYS 209
+ I + +G +GA + + ++ Y S H + I+ LI S
Sbjct: 140 DEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCIRPDLLITES 199
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
S+ T D + V+E E L + C V GG V
Sbjct: 200 TYGSI--TRDCRK-----------------------VKEREFLKAVSDC----VARGGRV 230
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIPI +G +L + + E + LK P+Y S + E+ + + ++K+F
Sbjct: 231 LIPIFALGRAQELCLLLDGYWERTGLKTPVYFSSGLTEKANEIYKKFISYTNETVRKKIF 290
Query: 330 SGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 388
+ + H+K + + M + P ++F+ L G ++ + + W
Sbjct: 291 ERNMFEYKHIKPFQ-------------RHYMESKGPMVLFASPGMLHSGMSLKIFKEWCE 337
Query: 389 DHNSLLVL 396
D +L+++
Sbjct: 338 DEKNLVII 345
>gi|315426611|dbj|BAJ48239.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
Length = 635
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 253 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 311
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 393 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 452
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 453 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 505
Query: 372 WSLRLGPTIHLLRRWSGDHNSLLVL 396
L GP + L+ + GD N+LL+
Sbjct: 506 GMLEGGPVLKYLKAFGGDENNLLLF 530
>gi|315426553|dbj|BAJ48183.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
gi|343485301|dbj|BAJ50955.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
Length = 635
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 253 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 311
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 393 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 452
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 453 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 505
Query: 372 WSLRLGPTIHLLRRWSGDHNSLLVL 396
L GP + L+ + GD N+LL+
Sbjct: 506 GMLEGGPVLKYLKAFGGDENNLLLF 530
>gi|407851025|gb|EKG05159.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 762
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 192 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 308
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 309 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|315425373|dbj|BAJ47039.1| mRNA 3'-end processing factor [Candidatus Caldiarchaeum
subterraneum]
Length = 638
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 253 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 311
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 396 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 455
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 456 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 508
Query: 372 WSLRLGPTIHLLRRWSGDHNSLLVL 396
L GP + L+ + GD N+LL+
Sbjct: 509 GMLEGGPVLKYLKAFGGDENNLLLF 533
>gi|344996811|ref|YP_004799154.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965030|gb|AEM74177.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 822
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIKTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 219 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
I +S++ D N ++EE L N+++ + V GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVVSQGGKVLIPA 228
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 334 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIVSSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|374327735|ref|YP_005085935.1| mRNA 3'-end processing factor [Pyrobaculum sp. 1860]
gi|356643004|gb|AET33683.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum sp. 1860]
Length = 644
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
D+V GG VLIP G ++L + +E + ++PIY+ + E L AY P +
Sbjct: 403 DTVSKGGKVLIPAFSTGRGQEILYILNKMIEGGLVPRVPIYVDGMIVETLNAYL-MYPHY 461
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 462 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 521
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + L+
Sbjct: 522 PVLDYFAQLAYDERNKLIF 540
>gi|384434275|ref|YP_005643633.1| KH-domain/beta-lactamase-domain-containing protein [Sulfolobus
solfataricus 98/2]
gi|261602429|gb|ACX92032.1| KH-domain/beta-lactamase-domain protein [Sulfolobus solfataricus
98/2]
Length = 635
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 402 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 460
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 461 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 509
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 510 PAVEFFKTMAPDPKNAIIF 528
>gi|284174985|ref|ZP_06388954.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus
98/2]
Length = 638
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|15897661|ref|NP_342266.1| mRNA 3'-end processing factor [Sulfolobus solfataricus P2]
gi|6015715|emb|CAB57542.1| mRNA 3'-end polyadenylation factor [Sulfolobus solfataricus P2]
gi|13813930|gb|AAK41056.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus
P2]
Length = 639
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 406 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 464
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 465 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 513
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 514 PAVEFFKTMAPDPKNAIIF 532
>gi|342180524|emb|CCC90000.1| putative cleavage and polyadenylation specificity factor subunit
[Trypanosoma congolense IL3000]
Length = 766
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 136/367 (37%), Gaps = 88/367 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 105 ALPYFCEQTAFKGRIFMTSATKAFYKMVMNDFL------RVGASAEDIVNNEWLQ----- 153
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I K++T+ + EE NGI + F++G
Sbjct: 154 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 183
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 184 LGAALFMVDIAGMKVLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 236
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
E+ + D VK GG LIP+ +G +LL
Sbjct: 237 E----------------------SREERETLFTTWVHDVVKGGGRCLIPVFALGRAQELL 274
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
+ + E IPIY SS+A+ + T + + +E+ +
Sbjct: 275 LILEEYWEAHKELQHIPIYYASSLAQRCMKLYQTFVSAMNDRVKEQHEN----------- 323
Query: 342 KEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
+ VF + S ++++ PC+V + L+ G ++ L RW GD N ++V
Sbjct: 324 -HRNPFVFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGIIVAGY 382
Query: 399 EVDAELA 405
VD +A
Sbjct: 383 CVDGTIA 389
>gi|291238246|ref|XP_002739041.1| PREDICTED: cleavage and polyadenylation specific factor 3-like
[Saccoglossus kowalevskii]
Length = 573
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 36/256 (14%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
D V+ GG VLIP+ +G +L + F + +LK PIY + + E+ Y W
Sbjct: 200 DCVEKGGKVLIPVFALGRAQELCILLETFWDRMNLKAPIYFSTGLTEKANHYYKLFITW- 258
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
Q+ K F +F H+ P S + P +VF+ L G ++
Sbjct: 259 TNQKIRKTFVQRNMFEFR--------HIKPFDRS---YTDNPGPMVVFATPGMLHGGLSL 307
Query: 381 HLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVLQCSFLSGKK 426
H+ ++W+ + +++ +L + EL + + V SF +
Sbjct: 308 HVFKKWASNEKNMVIMPGYCVAGTVGHKILNGQRKIELENRQTIDVKLSVQYMSFSAHAD 367
Query: 427 LQKVQPLLKILQPKLVLFPEEWRTHVSFSD---VTSFSVSHYSENETIHIPSLKESAELE 483
+ + L+K +PK V+ + F V F V + +P ES +E
Sbjct: 368 AKGIMQLIKQCEPKNVMLVHGEAKKMDFLKQKIVQQFGVQCF-------MPPNGESVVIE 420
Query: 484 IAADIASKFQWRMLKQ 499
++I + +LK+
Sbjct: 421 THSNIPADISVNLLKR 436
>gi|281201684|gb|EFA75892.1| integrator complex subunit 11 [Polysphondylium pallidum PN500]
Length = 648
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 183/481 (38%), Gaps = 85/481 (17%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T + G+ IY+T + + LI +++ Y+ Y + + Q ++
Sbjct: 75 ALPYFTEICGYDGPIYMT--------VCYKCLISISI-YKYNYNSL-TFMLQLIQLPTKA 124
Query: 105 LLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 161
++P L RKI + G E P +KDC+ KV + + + L IK + +
Sbjct: 125 IVPILLEDYRKIVVDRKG-ETNFFTP--QMIKDCMKKVIPVALHQTIDVDDELSIKPYYA 181
Query: 162 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 221
G +GA + + ++ Y N + + L++ TE
Sbjct: 182 GHVLGAAMFYCKVGEESVVYTGDYNMTPDRHLGSAWIDAVNPTLLI---------TETTY 232
Query: 222 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 281
++ D E + L E VE+ GG VLIP+ +G +
Sbjct: 233 ATTIRDSKRGRER--DFLKRVHECVEK-----------------GGKVLIPVFALGRVQE 273
Query: 282 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKL 340
L I + E L +PIY +AE+ Y W ++ ++ + F H+K
Sbjct: 274 LCILIDTYWEQMGLSVPIYFSEGLAEKANFYYKLFIGWTNQKIKQTFVKRNMFDFKHIKP 333
Query: 341 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV----- 395
++L++ P ++F+ L G ++ + ++W+ ++ +
Sbjct: 334 FD-------------RMLVDAPGPMVLFATPGMLHAGASLEVFKKWAPSELNMTIIPGYC 380
Query: 396 ---------LENEVDAELAVLPFKP---ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 443
L N ++ + K + K+ SF + + + L+K+ QPK VL
Sbjct: 381 VVGTVGNKLLSNASGPQMVEIDKKTTLEVKCKIHNLSFSAHADAKGIMQLIKMSQPKNVL 440
Query: 444 FPEEWRTHVSF-SDVTS--FSVSHY--SENETIHIPSLKESAELEIAADIASKFQWRMLK 498
+ + F SD S F++ Y + T++I S K I DI+ K R +
Sbjct: 441 LVHGEKEKMRFLSDKISKDFNIPCYFPANGVTVNIESSK-----SIPIDISLKLLKRQIS 495
Query: 499 Q 499
+
Sbjct: 496 E 496
>gi|341581963|ref|YP_004762455.1| cleavage and polyadenylation specificity factor subunit-like
protein [Thermococcus sp. 4557]
gi|340809621|gb|AEK72778.1| cleavage and polyadenylation specificity factor subunit-like
protein [Thermococcus sp. 4557]
Length = 651
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y EE EK + +++ GG VLIP VG +++ + + L++PI
Sbjct: 399 NDYQMPREEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARIGGLEVPI 456
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L + +E++F +P+F V +E++
Sbjct: 457 YLDGMIWEATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKPVANSRERQD------- 508
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLASDPKNSMVFVSYQAEGTLG 557
>gi|268552491|ref|XP_002634228.1| Hypothetical protein CBG01798 [Caenorhabditis briggsae]
Length = 722
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 97/510 (19%), Positives = 191/510 (37%), Gaps = 101/510 (19%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+L + F K ++T A I ++++ + + ++ ++ GA+ + Q ++LE
Sbjct: 78 ALPWLLQKTAFRGKCFMTHATKAIYRMLLGDYVRIS----KYGGADRN---QLYTEDDLE 130
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
++K++T+ F E+ NGI + +G
Sbjct: 131 -----------------------------KSMAKIETIDFREQKEVNGIRFW-PYVAGHV 160
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GAC ++I A + Y D+ ++ L +++ + I +S+
Sbjct: 161 LGACQFMIEIAGVRVLYTG------------DFSCLEDRHLCA-AEIPPVSPQVLITEST 207
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
+ + ++ D SV E + D V GG LIP +G +L+
Sbjct: 208 YG-----------TQTHEDRSVREKRFTQMVH----DIVTRGGRCLIPAFAIGPAQELML 252
Query: 285 QIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLI 341
+ + E IP+Y SS+A++ ++ T + + Q+++ +P +F HV +
Sbjct: 253 ILDEYWEAHQELHDIPVYYASSLAKKCMSVYQTFVNGMNSRIQKQIAIKNPFIFKHVSTL 312
Query: 342 KEKKIHVFPAVHSPKLLMNWQE---PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 397
+ M+ E PC+V + L+ G + L W D N ++
Sbjct: 313 RG---------------MDQFEDAGPCVVLATPGMLQSGFSRELFENWCSDSKNGCIIAG 357
Query: 398 NEVDAELAVLPFK-------------PISMKVLQCSFLSGKKLQKVQPLLKILQP-KLVL 443
V+ LA P+ M+V SF + + +K L+P LVL
Sbjct: 358 YCVEGTLAKHILTEPEEIVSLSGEKLPMRMQVGYVSFSAHTDFNQTSNFVKTLKPPHLVL 417
Query: 444 FPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLN 503
E + +H P E EL+ + +K ++ ++ N
Sbjct: 418 VHGELHEMSRLKAGIERLFQDINIPIEVHNPRNTERLELQFRGEKTAKVIGKLAERMPEN 477
Query: 504 ITRLKGRLFVNHGKHQLLPENEPGGSSQTR 533
+ G L N+ + L+ ++E G + R
Sbjct: 478 NKIISGVLVKNNFSYSLMAKDELGSYTSLR 507
>gi|403337788|gb|EJY68117.1| Integrator complex subunit 11 [Oxytricha trifallax]
Length = 771
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 45/268 (16%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K CI+K+ T++ E G + + A+ +G +GAC + + ++ Y N +
Sbjct: 143 IKACIAKISTIQLHETQVIKGDIKVTAYYAGHVLGACMFYVECNGESVVYTGDYNMTADR 202
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ + D+ + TE ++ D + E E K
Sbjct: 203 HLGAAWIDKLRPDVCI---------TETTYATTIRDSKRSRER-------------EFLK 240
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
+ +++ GG VLIP+ +G +L + + ++L+ PIY + E+
Sbjct: 241 VVH------ETLDNGGKVLIPVFALGRAQELCVLLETYWNRTNLQYPIYFSGGLTEKANF 294
Query: 312 YTNTIPEWLCKQRQEKLFSGDP---LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 368
Y W ++ +K F+ + F HVK + I +P + F
Sbjct: 295 YYKLFINW-TNEKIKKTFTKNQNMFQFQHVKTLDTASI-------------KSDQPMVCF 340
Query: 369 SPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ L G ++ + + W+G + L++
Sbjct: 341 ASPGMLHGGYSLQIFKDWAGQEKNTLII 368
>gi|159487337|ref|XP_001701679.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280898|gb|EDP06654.1| predicted protein [Chlamydomonas reinhardtii]
Length = 460
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
D+V AGG VLIP +G +LL +A L +PIY S++A L Y + W
Sbjct: 233 DTVAAGGKVLIPTFAMGRAQELLMLLADCWRRKGLTVPIYFSSAMASRALTYYQLLLNWT 292
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIH-VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
A+V+ E ++ +F + L+ P ++F+ ++ G +
Sbjct: 293 N--------------ANVRKAVEADVYGMFRTRPWDRSLLQAPGPAVLFASPGNITSGVS 338
Query: 380 IHLLRRWSGDHNSLLVLEN 398
+ R W+G +L+VL
Sbjct: 339 LEAFRAWAGSSRNLVVLAG 357
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 136/377 (36%), Gaps = 75/377 (19%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L R++ + G + AH+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGED---ELFTTAHIANCMKKVIAIDLKQTIQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 263
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 264 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 324 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 383 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 427
+ W+ +L+ L A ++ KP ++ K+ Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMSGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDA 395
Query: 428 QKVQPLLKILQPKLVLF 444
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|223478352|ref|YP_002582770.1| RNA-metabolising metallo-beta-lactamase family protein
[Thermococcus sp. AM4]
gi|214033578|gb|EEB74405.1| RNA-metabolising metallo-beta-lactamase family [Thermococcus sp.
AM4]
Length = 648
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y EE EK + ++K GG VLIP VG +++ + + + +PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHHTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPI 453
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L ++ +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDEKNSIIFVSYQAEGTLG 554
>gi|57641363|ref|YP_183841.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus kodakarensis KOD1]
gi|57159687|dbj|BAD85617.1| cleavage and polyadenylation specficity factor subunit homolog
[Thermococcus kodakarensis KOD1]
Length = 648
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y EE EK + ++K GG VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L K +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKHIREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 554
>gi|229579166|ref|YP_002837564.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582079|ref|YP_002840478.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
Y.N.15.51]
gi|284997854|ref|YP_003419621.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
L.D.8.5]
gi|228009880|gb|ACP45642.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228012795|gb|ACP48556.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445749|gb|ADB87251.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5]
Length = 638
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|428177137|gb|EKX46018.1| hypothetical protein GUITHDRAFT_70813 [Guillardia theta CCMP2712]
Length = 485
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 46 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105
LP+ T + G+ +Y T I +++E+ +++E R EE ++
Sbjct: 76 LPYFTEVLGYDGPMYATHPTKAIMPILLEDYRKISVERRGV--------------EEKDM 121
Query: 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165
S +KDC+ KV E I+ + +G +
Sbjct: 122 FSSQ---------------------QIKDCMMKVTPCALEETIMIEEDFEIRPYYAGHVL 160
Query: 166 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 225
GA + I + +I Y N M D L DL +ST ++
Sbjct: 161 GAAMFYIRVGQQSILYTGDYN------MTPDRHLGSARCDKLRPDLLITEST----YATT 210
Query: 226 SDDNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ W E ++N +S + V+ GG VLIP+ +G +L
Sbjct: 211 IRESKRWRERDMLNQVS--------------------ECVRNGGKVLIPVFALGRAQELC 250
Query: 284 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIK 342
+ F E + LK+PIY + + E+ Y W ++ ++ + F H++
Sbjct: 251 LLLDAFWERTGLKVPIYFSAGLTEKANLYYKMYISWTNQKIKDTFVKRNVFDFQHIQPFD 310
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ ++ P ++F+ L G ++ + ++W+ +L+++
Sbjct: 311 -------------RAFIDRPGPMVLFATPGMLHGGLSMEVFKKWAPSDKNLVIM 351
>gi|227830349|ref|YP_002832129.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
L.S.2.15]
gi|227456797|gb|ACP35484.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15]
Length = 638
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|227827653|ref|YP_002829433.1| beta-lactamase [Sulfolobus islandicus M.14.25]
gi|229584857|ref|YP_002843359.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
M.16.27]
gi|238619821|ref|YP_002914647.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
M.16.4]
gi|227459449|gb|ACP38135.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25]
gi|228019907|gb|ACP55314.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27]
gi|238380891|gb|ACR41979.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4]
Length = 638
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|30677952|ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
Length = 613
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 263
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 264 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 324 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 383 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 427
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDA 395
Query: 428 QKVQPLLKILQPKLVLF 444
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|146099573|ref|XP_001468678.1| putative cleavage and polyadenylation specificity factor
[Leishmania infantum JPCM5]
gi|134073046|emb|CAM71766.1| putative cleavage and polyadenylation specificity factor
[Leishmania infantum JPCM5]
Length = 756
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 341 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 397
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 398 NEVDAELA 405
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|156096737|ref|XP_001614402.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803276|gb|EDL44675.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 879
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSLKIPIYIISSV 305
+ L ICS + ++K+ G VLIP++ FL+L+E I + + ++ I+ I
Sbjct: 385 DSLNKICSIVLRTIKSKGCVLIPVDLHFLYFLELIELIGVVISKYLAKEEQVLIFTIIGN 444
Query: 306 AEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPK 356
++ + EW+ + R++K FS + + + +LI I+
Sbjct: 445 ISNVIHQADLCAEWVEESRKKKCSKVSNPQGPFSIEIMIKNNRLITGNDIND-------- 496
Query: 357 LLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELAVLPF 409
+ W + PC+ F SLR + LL +W+ ++NSLL+++ D + PF
Sbjct: 497 -IAKWFRYPCVCFVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVSVLAPF 550
>gi|357440035|ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
truncatula]
gi|355479343|gb|AES60546.1| Cleavage and polyadenylation specificity factor subunit [Medicago
truncatula]
Length = 630
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 116/299 (38%), Gaps = 75/299 (25%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
+ + LP+ + G SA +Y TE R+G L M Y F ++ S
Sbjct: 66 LHLAALPYAIKHLGLSAPVYSTEPVYRLGLLTM---------YDHFLSRKQVSDFDLFTL 116
Query: 101 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160
++++ + ++ ++ G G GI +I +
Sbjct: 117 DDIDSAFQTVTRLTYSQNHHLSGKG-------------------------EGI-VIAPHT 150
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDST 217
+G +G W I+ ++ Y A+DF++R + G+ L + + L +
Sbjct: 151 AGHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVLGSFVRPAVLIT- 199
Query: 218 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 277
+ N+L+N ++ ++ I +++AGG+VL+P++ G
Sbjct: 200 ----------------DAYNALNNQPYRRQKDKEFGDILK---KTLRAGGNVLLPVDTAG 240
Query: 278 VFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLF 329
L+L+ + + +L PIY ++ VA + Y + EW+ +Q +E +F
Sbjct: 241 RILELILMLESYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIF 299
>gi|385773323|ref|YP_005645889.1| beta-lactamase [Sulfolobus islandicus HVE10/4]
gi|323477437|gb|ADX82675.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4]
Length = 638
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|398022636|ref|XP_003864480.1| cleavage and polyadenylation specificity factor, putative
[Leishmania donovani]
gi|322502715|emb|CBZ37798.1| cleavage and polyadenylation specificity factor, putative
[Leishmania donovani]
Length = 756
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 341 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 397
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 398 NEVDAELA 405
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|71654879|ref|XP_816051.1| cleavage and polyadenylation specificity factor [Trypanosoma cruzi
strain CL Brener]
gi|70881152|gb|EAN94200.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 430
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 192 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 308
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 309 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|402578305|gb|EJW72259.1| hypothetical protein WUBG_16832, partial [Wuchereria bancrofti]
Length = 107
Score = 46.6 bits (109), Expect = 0.040, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 362 QEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCS 420
+ PC++F+ H SLR+G +H L W D N+L++ + + + P++ + ++
Sbjct: 2 RTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALIMTDPDYPIQNVYGPYEKLPIRAFFFP 61
Query: 421 FLSGKKLQKVQP-LLKILQPKLVLFPE 446
+ ++ P +L L PKL++ PE
Sbjct: 62 IETRLDFSQLNPSILPDLAPKLLVMPE 88
>gi|387594235|gb|EIJ89259.1| integrator complex subunit 11 [Nematocida parisii ERTm3]
gi|387594982|gb|EIJ92609.1| integrator complex subunit 11 [Nematocida parisii ERTm1]
Length = 502
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 41/207 (19%)
Query: 259 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISS-------VAEELLA 311
+ VK GG VLIP+ +G +L + E + L IPIY ++ + ++ +
Sbjct: 225 VVQCVKNGGKVLIPVFALGRAHELCLLLDTHWEKTKLDIPIYTSATLTHKANDIYKQFID 284
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
YT+ +R LF F HVK L + + P I+FS
Sbjct: 285 YTHEHIRSTLHKRN--LFD----FRHVKQFDSN-------------LASLEGPMILFSSP 325
Query: 372 WSLRLGPTIHLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVL 417
L GP++ + ++W GD N+++ VL E+ + + P+ MKV
Sbjct: 326 GMLHSGPSLSIFKKWCGDPNNMVIFPGYCVRGTIGERVLNGASQIEVGGIVY-PVRMKVK 384
Query: 418 QCSFLSGKKLQKVQPLLKILQPKLVLF 444
F + + + L++ +P V+
Sbjct: 385 NMPFSAHADQKGILALVQQCEPDNVIL 411
>gi|452825586|gb|EME32582.1| RNA-metabolising metallo-beta-lactamase family protein [Galdieria
sulphuraria]
Length = 370
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 135/354 (38%), Gaps = 67/354 (18%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP LT G+ IY++E ++ ++EE + + G +E + +W +
Sbjct: 43 ALPILTERWGYDGPIYMSEPTRKLSYYILEECV------GSWGGDDEWTDSSRSEWSYTQ 96
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
V+ C++KV + G+ + + ++ +G
Sbjct: 97 -------------------------REVESCLTKVTIMEPGQSISVGENVQVHSWMAGHV 131
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224
+GA ++ S N + +F S F + D+ D+ ++T +S
Sbjct: 132 LGA--YMFSIVVDNHRILYTGDFTS--CPTFHLPPARVDDIPYPPDVILSEATY---ATS 184
Query: 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 284
F D N ++E + + C +D GG VL+P+ +G +LL
Sbjct: 185 FKDGRLN---------------NQVEFIQNVLDCLLD----GGKVLVPVFAIGRAQELLL 225
Query: 285 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW--LCKQRQEKLFSGDPLFAHVKLIK 342
+ ++ + L PI + A ++L W R E++ S ++ V+++
Sbjct: 226 LLEMYWQRFHLSFPILFSTKNAHQVLQIYTEFAHWTRTPSTRDEQMMSYQTWWSRVQVVD 285
Query: 343 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+++ AV W P + + +L G ++ + RR + D +LL++
Sbjct: 286 PEQL--LDAVE------EWDRPLVALTTPGTLARGLSLQVFRRIAPDEKNLLII 331
>gi|302832830|ref|XP_002947979.1| hypothetical protein VOLCADRAFT_103614 [Volvox carteri f.
nagariensis]
gi|300266781|gb|EFJ50967.1| hypothetical protein VOLCADRAFT_103614 [Volvox carteri f.
nagariensis]
Length = 1166
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 36/279 (12%)
Query: 132 VKDCISKVQTLRFGEEACYNGI-LIIKAFSSGLDIGACNWIISGAK---GNIAYISGSNF 187
V+ C+ +V+ +R+G+ + L A+SSG G W I+ + Y+ +
Sbjct: 578 VRYCLDRVRPVRYGQVVPLDSYELTAVAYSSGSGFGRAVWQIADGSERCRTVLYLPDAAA 637
Query: 188 ASGHAMDFDYRAIQGSD-LILYSD-LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 245
A A + D LIL D L+ + EE++ +
Sbjct: 638 AHPFAPPMPLNLVSAPDALILGPDCLAPFPPSRPPQYHHHHHHQRVKEEVLRA------- 690
Query: 246 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 304
V GGS LIP+ G +LLE +A + + L +P+ I
Sbjct: 691 -----------------VVGGGSCLIPVYPTGEAWELLEGLAGALTSADLPHVPLMYIGP 733
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
+ LA + E L +RQ ++ FA L++ ++ V ++ P++
Sbjct: 734 RSGTSLALASVSLESLAPERQAAVYVPQHPFAFDALMQAGRLVVGSSLQDPEVQRCLAAG 793
Query: 365 C-----IVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN 398
C + + S R GP + LL R+ D +LL+L +
Sbjct: 794 CPRVVALAAADSLSYRGGPALELLLRFGPDPRNLLLLPH 832
>gi|20094663|ref|NP_614510.1| metal-dependent RNase [Methanopyrus kandleri AV19]
gi|19887824|gb|AAM02440.1| Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain [Methanopyrus kandleri AV19]
Length = 652
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
D++K GG VLIP VG +++ + L+ P+Y+ + E +T PE+L
Sbjct: 417 DTLKKGGKVLIPSFAVGRAQEVMLVLEDMHRKDELEGPVYLDGMIYEATAIHT-AYPEYL 475
Query: 321 CKQRQEKLF--SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
++ Q ++ DP + V E H + +M EP ++ S L GP
Sbjct: 476 NRRLQHRILHEDDDPFTSEVFEPVEGSDHR-------QAIMEDDEPAVILSTSGMLEGGP 528
Query: 379 TIHLLRRWSGDHNSLLVL 396
+ LR S D + L+
Sbjct: 529 ILEYLRELSDDPKNTLIF 546
>gi|424814262|ref|ZP_18239440.1| putative metal-dependent Rnase [Candidatus Nanosalina sp. J07AB43]
gi|339757878|gb|EGQ43135.1| putative metal-dependent Rnase [Candidatus Nanosalina sp. J07AB43]
Length = 544
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 46/290 (15%)
Query: 123 GGGCPC-IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA--CNWIISGAKGNI 179
GG P +H+K + + T FGE + + ++G IG+ C+ + NI
Sbjct: 282 GGNAPYDSSHIKKAVKRTITPEFGEVTDITPDMRLTLKNAGHIIGSALCHIHVGEGLHNI 341
Query: 180 AYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSL 239
Y N+ DSTE + +D N E M +
Sbjct: 342 LYTGDYNY---------------------------DSTEML---RTADTNFQRVETMITE 371
Query: 240 SNY----DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 295
S Y D+ E S ++ GG V++P+ VG ++L +A M+
Sbjct: 372 STYGGKEDKQTSRDESNKKFLSKMKQTLNKGGKVIVPVFAVGRSQEILGLLADEMDRDYF 431
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
P++I + + +T PE+L ++ Q K++ F +KE + H+
Sbjct: 432 DYPVFIDGMIRDANALHT-AYPEFLSEKVQNKVYKDKSPF-----LKENIETI--GSHNE 483
Query: 356 KLLMNWQEPCIVFSPHWSLRLGPTIHLLRR-WSGDHNSLLVLENEVDAEL 404
+ ++ + P I+ + S+ GP + L+R S NSL+ + + + L
Sbjct: 484 RKQVHEEGPSIILTTSGSITGGPVMSYLKREASKSENSLIFVGYQFEGSL 533
>gi|256810164|ref|YP_003127533.1| beta-lactamase [Methanocaldococcus fervens AG86]
gi|256793364|gb|ACV24033.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86]
Length = 421
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ +G ++L I +M LK +PIY ++ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYMRSGKLKEVPIYTDGALIHATAVYLSYI-NW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPK--LLMNWQEPCIVFSPHWSLRLG 377
L + +K + E +I+ F V L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGVVKKADESLVFN-KEPCIIVSTSGMVQGG 307
Query: 378 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 424
P + L+ N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPVRGKVVKIEFSAHG 367
Query: 425 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 455
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|154336691|ref|XP_001564581.1| putative cleavage and polyadenylation specificity factor
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061616|emb|CAM38647.1| putative cleavage and polyadenylation specificity factor
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 756
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F ++++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETIEYHEEVTVNGI-SFQPFNAGHV 171
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 341 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 397
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLIDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 398 NEVDAELA 405
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|18977777|ref|NP_579134.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus DSM 3638]
gi|18893520|gb|AAL81529.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus DSM 3638]
Length = 651
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + +++ GG VLIP VG +++ + + + +PIY+ +
Sbjct: 406 EEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPIYLDGMIW 463
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
E +T PE+L K +E++F D P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSKTLREQIFKEDYNPFLSEI-------FHPVANSKERQDIIDSNEP 515
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLASDKRNSIIFVSYQAEGTLG 557
>gi|385775961|ref|YP_005648529.1| beta-lactamase [Sulfolobus islandicus REY15A]
gi|323474709|gb|ADX85315.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A]
Length = 638
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-LTGLVDEVTAIHNAYPEWL 463
Query: 321 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|449446027|ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Cucumis sativus]
Length = 738
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
+++A G+VL+P++ G L+L++ + + E SL PI+ ++ VA + Y + EW+
Sbjct: 225 TLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMS 284
Query: 322 KQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIH 381
+ F H + HV ++ +L P +V + SL G +
Sbjct: 285 DTIAKS-------FEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHD 337
Query: 382 LLRRWSGDHNSLLVL 396
+ W+ D +L++
Sbjct: 338 IFVDWAMDAKNLVLF 352
>gi|397651897|ref|YP_006492478.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus COM1]
gi|393189488|gb|AFN04186.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus COM1]
Length = 648
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + +++ GG VLIP VG +++ + + + +PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPIYLDGMIW 460
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
E +T PE+L K +E++F D P + + H + +++ EP
Sbjct: 461 EATAIHT-AYPEYLSKTLREQIFKEDYNPFLSEI-------FHPVANSKERQDIIDSNEP 512
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 513 AIIIASSGMLVGGPSVEYFKQLASDKRNSIIFVSYQAEGTLG 554
>gi|119719226|ref|YP_919721.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk
5]
gi|119524346|gb|ABL77718.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5]
Length = 639
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 45/309 (14%)
Query: 94 GPQWMKWEEL---ELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150
GP +M L +LL K+A E +EL + V + TL +GE
Sbjct: 259 GPVYMTEPTLHLSKLLFEDYIKVAQREGKNELY----SMRDVNSLLLNTYTLSYGEVTDI 314
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFASGHAMDFDYRAIQGSDLILY 208
+ + + +G +G+ + +G NI Y +A +D Y +++++
Sbjct: 315 APEIRLTFYRAGHILGSAMVHLHIGEGLINIVYTGDMKYARTMLLDPAYNKFPRAEVLII 374
Query: 209 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 268
S+ S D+ L + D++ E+ K+ +++++ G
Sbjct: 375 E--STYGSKSDV------------------LPSEDDAKLELAKIV------LETIERKGV 408
Query: 269 VLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 327
VLIP+ VG ++L + M+ ++ ++PI+ I + +E+ A T PE+L +E
Sbjct: 409 VLIPVLAVGRAQEVLLALLDLMKKGAVPRVPIF-IEGMIDEVSAVHMTFPEYLSATIREM 467
Query: 328 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 387
++ + F + IHV + + ++P I+ + L GP + LR +
Sbjct: 468 IYRDENPFT------SENIHVIRG--EAREDITEKKPSIILATSGMLTGGPVLDYLRILA 519
Query: 388 GDHNSLLVL 396
D NS LV
Sbjct: 520 DDENSSLVF 528
>gi|390960706|ref|YP_006424540.1| hypothetical protein CL1_0538 [Thermococcus sp. CL1]
gi|390519014|gb|AFL94746.1| hypothetical protein containing KH domain /beta-lactamase-domain
protein [Thermococcus sp. CL1]
Length = 648
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y EE EK + +++ GG VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L + +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIVFVSYQAEGTLG 554
>gi|432328821|ref|YP_007246965.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Aciduliprofundum sp. MAR08-339]
gi|432135530|gb|AGB04799.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Aciduliprofundum sp. MAR08-339]
Length = 647
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSV 305
E E+L I S + GG +LIP+ VG +++ + FM L +IPIY+ +
Sbjct: 403 EAAERLKDIVSRTFER---GGKILIPVFAVGRSQEVMLVLESFMRNGELPEIPIYLDGMI 459
Query: 306 AEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE 363
E + PE+L K +E +F +P + + H + + +++ +
Sbjct: 460 WEATTIHA-AYPEYLNKDLRELIFQKKENPFLSPI-------FHRVESSERREEVISSSD 511
Query: 364 PCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV-------------LENEVDAELAVLPFK 410
P IV S + GP + + W+ D + L+ ++N + L L K
Sbjct: 512 PAIVLSTSGMMNGGPVLEYFKHWADDPRNTLIFVGYQAVGTLGRRIQNGLSEVLMSLGGK 571
Query: 411 PISMKV 416
PI++KV
Sbjct: 572 PITIKV 577
>gi|348689662|gb|EGZ29476.1| hypothetical protein PHYSODRAFT_552782 [Phytophthora sojae]
Length = 513
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 260 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 319
+ +V+ GG+VLIP + G L+L+ + + + L+ PI ++ ++ + EW
Sbjct: 5 LKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRDPIALLHDMSYYTPKAAQAMLEW 64
Query: 320 LCKQRQEKLFS---GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
C R K F +P F+H+ L VH+ + L P +V + SL
Sbjct: 65 -CNDRIAKNFDVGRQNPFQFSHIHL-----------VHTLEELDALPSPKVVLATSPSLE 112
Query: 376 LGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK----PISMKVLQCS-----FLSGK 425
G + RW+ D NS++ + A K P + KV+ C+ FL G
Sbjct: 113 CGFAKDIFIRWAPDPRNSIIFTSTTPETSFASRVLKIAKDPSAAKVISCTVTKKVFLEGA 172
Query: 426 KL 427
+L
Sbjct: 173 EL 174
>gi|70606450|ref|YP_255320.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449066664|ref|YP_007433746.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449068938|ref|YP_007436019.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
gi|68567098|gb|AAY80027.1| hypothetical metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449035172|gb|AGE70598.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449037446|gb|AGE72871.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
Length = 631
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 244 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYII 302
E+ EE E A + ++ GG VLIP+ VG +++ I M+ + ++P+YI
Sbjct: 382 ENREESE--AKLIDIINKTISKGGKVLIPVLSVGRGQEIMLVINDAMKNKKIPEVPVYI- 438
Query: 303 SSVAEELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMN 360
+ + +E+ A PEWL ++ +E + D P + F + K +
Sbjct: 439 TGMVDEITAIHTAYPEWLSRELREAILYRDENPFMS----------EFFKRIEGYKEDIA 488
Query: 361 WQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
EP I+ + L GP + + + D NS++ + + + L
Sbjct: 489 QGEPSIIIATSGMLNGGPAVEFFKNMAHDTRNSIVFVSYQAEGTLG 534
>gi|336121871|ref|YP_004576646.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus
okinawensis IH1]
gi|334856392|gb|AEH06868.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus
okinawensis IH1]
Length = 422
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWL 320
+++ GG V+IP+ VG +++ I+ +M LK +P+Y+ S+ Y + EWL
Sbjct: 205 TIEKGGKVIIPVFAVGRAQEIMAIISNYMRSGLLKNVPVYVDGSLIHATGVYL-SYSEWL 263
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAV-HSPKLLMNWQEPCIVFSPHWSLRLGPT 379
+ + L E +I+ F V + + +++ ++ CIV S ++ GP
Sbjct: 264 NPKIRNGL--------------ENRINPFGDVKKANRQIIDKEDSCIVISTSGMVQGGPV 309
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 426
+ L+ N +++ + + L + PFK PI+ +V++ F + G
Sbjct: 310 LQYLKLLKDPKNKIILTGYQAEDTLGRQLEEGAKEITPFKNKLPINGEVVKIEFSAHGDY 369
Query: 427 LQKVQPLLKILQPKLVL 443
++ L KI +PK V
Sbjct: 370 NSLIRYLKKIPKPKKVF 386
>gi|401428833|ref|XP_003878899.1| cleavage and polyadenylation specificity factor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495148|emb|CBZ30452.1| cleavage and polyadenylation specificity factor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 756
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 139/368 (37%), Gaps = 90/368 (24%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ + SV E+ V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREQL---------FTGSVHEV-------------VRRGGRCLVPVFALGRAQELL 262
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 340
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 341 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 397
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 398 NEVDAELA 405
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|379005388|ref|YP_005261060.1| universal KH-domain/beta-lactamase-domain protein [Pyrobaculum
oguniense TE7]
gi|375160841|gb|AFA40453.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Pyrobaculum oguniense TE7]
Length = 635
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++V GG VLIP G ++L + M+ + ++PIY+ + E L Y P +
Sbjct: 394 ETVSKGGKVLIPAFSTGRGQEILYVLNKMMDGGLVPRVPIYVDGMIVETLNVYL-MYPHY 452
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP I+ +PH L G
Sbjct: 453 LNPEVAEEIYGGVNPFTTSGNVVIVDRAKRVEDRINQVAKIAQSEEPAIIIAPHGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + LV
Sbjct: 513 PVLDYFAQLAPDDKNKLVF 531
>gi|339244969|ref|XP_003378410.1| putative metallo-beta-lactamase domain protein [Trichinella
spiralis]
gi|316972680|gb|EFV56345.1| putative metallo-beta-lactamase domain protein [Trichinella
spiralis]
Length = 562
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
D + GG VLIP+ +G +L + + E +L IPIY+ +AE+ + Y W
Sbjct: 194 DCINNGGKVLIPVFALGRAQELCILLESYWERMNLSIPIYVSKGMAEKAVDYYKLFVTW- 252
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
++ +K F +F HV P S + P +VF+ L G ++
Sbjct: 253 TSEKIKKTFVKRNMFDFK--------HVLPFEDS---FADTPGPMVVFATPGMLHSGQSL 301
Query: 381 HLLRRWSGDHNSLLVL 396
+ ++W+ + +++++
Sbjct: 302 KIFKKWATNEKNMVIM 317
>gi|150399442|ref|YP_001323209.1| beta-lactamase domain-containing protein [Methanococcus vannielii
SB]
gi|150012145|gb|ABR54597.1| beta-lactamase domain protein [Methanococcus vannielii SB]
Length = 421
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ VG +++ I +M+ +LK +PIY+ S+ + Y EW
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYVNGSLTHTIGMYMG-YSEW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPK--------------IKNTIENRINPFGNLIKNSDEVFNKEPCIIISTSGMVQGGPI 308
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 427
+ L N L++ + + + + PFK P++ V++ F +
Sbjct: 309 LQYLSLLKNPKNKLILTGYQAEGTIGRSLEEGVKEITPFKRAIPVNGTVIKVEFSAHADY 368
Query: 428 QK-VQPLLKILQPK--LVLFPEEWR 449
++ L KI +PK +V+ E ++
Sbjct: 369 NSLIRYLKKIPEPKKAIVMHGERYQ 393
>gi|347522769|ref|YP_004780339.1| KH-domain/beta-lactamase-domain containing protein [Pyrolobus
fumarii 1A]
gi|343459651|gb|AEM38087.1| KH-domain/beta-lactamase-domain protein [Pyrolobus fumarii 1A]
Length = 649
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 267 GSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQ 325
G VLIP+ VG +++ I ++ L K+PIY I + +E+ A T PE+L +
Sbjct: 409 GKVLIPVLAVGRAQEIILVIVDAIQKGYLRKVPIY-IDGMIDEVTAIHLTYPEYLAPSLR 467
Query: 326 EKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRR 385
+K+ G+ F LIK + + ++N EP ++ + L GP++ +
Sbjct: 468 KKILYGENPFTAEFLIKVE------GAQMREEIINSSEPAVIIATSGMLNGGPSVEYFKN 521
Query: 386 WSGDH-NSLLVLENEVDAELA 405
+ D N+L+ + +V L
Sbjct: 522 LAHDEKNTLIFVSYQVKGTLG 542
>gi|240103777|ref|YP_002960086.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
gi|239911331|gb|ACS34222.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
Length = 651
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y +E EK + ++K GG VLIP VG +++ + + + +PI
Sbjct: 399 NDYQMPRDEAEKR--LIEVIHHTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPI 456
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L ++ +E++F +P+F V +E++
Sbjct: 457 YLDGMIWEATAIHT-AYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQD------- 508
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|119872614|ref|YP_930621.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum
DSM 4184]
gi|119674022|gb|ABL88278.1| beta-lactamase domain protein [Pyrobaculum islandicum DSM 4184]
Length = 640
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++V GG VLIP G ++L + +E + ++P+Y+ + E L AY P +
Sbjct: 399 EAVSRGGKVLIPAFSTGRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYL-MYPHY 457
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 458 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 517
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + LV
Sbjct: 518 PVVDYFSQLAHDPRNKLVF 536
>gi|281208327|gb|EFA82503.1| beta-lactamase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 738
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 151 NGILIIKAFSSGLDIGACNWIISGAKGNIAY-ISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ + I +S+G IG W I+ I Y I ++ GH F + +QG DL
Sbjct: 145 SATITITPYSAGHMIGGSVWKITKETDTIIYAIDFNHRKEGHLEGF-FPVLQGQDL---- 199
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
L T I + + +++ +EK + S + +++ GG+V
Sbjct: 200 ----LKPTHLITDARHA-------------RTPPTALKRIEKDKALYSTLLKTLREGGNV 242
Query: 270 LIPINRVGVFLQLLEQI--------------AIFMECSSLKIPIYIISSVAEELLAYTNT 315
L+P++ G L+LL+ I IF+ + Y + A+ L + +T
Sbjct: 243 LLPVDTAGRSLELLQSIESHWAQQRLSGAYTVIFLNNVT-----YNVCEFAKSQLEFMST 297
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
+QR E +F+ F ++KL +++ + LM +V + L
Sbjct: 298 AAGLKFEQRNENIFA----FKNIKLCH--------SIYDLENLMGLSSNYVVLASGKDLE 345
Query: 376 LGPTIHLLRRWSGDHNSLLVLENEVD 401
G L +W+ D +L+++ + V+
Sbjct: 346 SGYARELFIKWAADSKNLILMTDSVE 371
>gi|9280039|dbj|BAB01576.1| unnamed protein product [Macaca fascicularis]
Length = 328
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 163 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWT 222
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
++ ++ F + + K I F + + P +VF+ L G ++
Sbjct: 223 NQKIRKT-------FVQRNMFEFKHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 270
Query: 381 HLLRRWSGDHNSLL 394
+ R+W+G+ +++
Sbjct: 271 QIFRKWAGNEKNMV 284
>gi|145590331|ref|YP_001152333.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282099|gb|ABP49681.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 635
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++V GG VLIP G ++L + M+ + ++PIY+ + E L Y P +
Sbjct: 394 ETVSKGGKVLIPAFSTGRGQEILYILNKMMDGGLVPRVPIYVDGMIVETLNVYL-MYPHY 452
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP I+ +PH L G
Sbjct: 453 LNPEVAEEIYGGVNPFTTSGNVVIVDRAKRVEDRINQVAKIAQSEEPAIIIAPHGMLNGG 512
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + LV
Sbjct: 513 PVLDYFAQLAPDDKNKLVF 531
>gi|261403765|ref|YP_003247989.1| beta-lactamase [Methanocaldococcus vulcanius M7]
gi|261370758|gb|ACX73507.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7]
Length = 421
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 67/345 (19%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+++ +S V+ L + EE N + K +++G +G+ + + I Y N
Sbjct: 101 IQNAMSSVECLNYYEERSINDNIKFKFYNAGHILGSASIYLEVDGKKILYTGDINENVSR 160
Query: 192 AM---DFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 248
+ D D+ I D+++ S+ S D+ + + + EE+ ++ N
Sbjct: 161 TLLSADTDFDEI---DVLIVE--STYGSPLDVKPARKTLERQLIEEIAETIEN------- 208
Query: 249 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAE 307
GG V+IP+ +G ++L + +M +L ++PIY S+
Sbjct: 209 -----------------GGKVIIPVFAIGRAQEILLILNNYMRSGNLTEVPIYTDGSLIH 251
Query: 308 E---LLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
++YTN WL + + + +G F +K + L+ N +EP
Sbjct: 252 ATAVYMSYTN----WLNPKIKNMIENGINPFGEIKKADDN------------LVFN-KEP 294
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL----ENEVDAEL-----AVLPFK---PI 412
CI+ S ++ GP + L+ N L++ E + EL + PFK PI
Sbjct: 295 CIIVSTSGMVQGGPILKYLKLLKDPKNKLILTGYQAEGTIGRELEEGAEEIQPFKNKIPI 354
Query: 413 SMKVLQCSFLS-GKKLQKVQPLLKILQP-KLVLFPEEWRTHVSFS 455
+ KV++ F + G V+ + KI +P K ++ E +SF+
Sbjct: 355 NGKVVKIEFSAHGDYNSLVRYIKKIPKPEKAIVMHGERYQALSFA 399
>gi|171184545|ref|YP_001793464.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170933757|gb|ACB39018.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 634
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++V GG VLIP G ++L + +E + ++P+Y+ + E L AY P +
Sbjct: 393 EAVSRGGKVLIPAFSTGRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYL-MYPHY 451
Query: 320 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEVYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 378 PTIHLLRRWSGDHNSLLVL 396
P + + + D + LV
Sbjct: 512 PVVDYFSQLAHDPRNKLVF 530
>gi|449528453|ref|XP_004171219.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 2-like, partial [Cucumis
sativus]
Length = 501
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
+++A G+VL+P++ G L+L++ + + E SL PI+ ++ VA + Y + EW+
Sbjct: 225 TLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMS 284
Query: 322 KQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIH 381
+ F H + HV ++ +L P +V + SL G +
Sbjct: 285 DTIAKS-------FEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHD 337
Query: 382 LLRRWSGDHNSLLVL 396
W+ D +L++
Sbjct: 338 XFVDWAMDAKNLVLF 352
>gi|256810348|ref|YP_003127717.1| KH-domain/beta-lactamase-domain-containing protein
[Methanocaldococcus fervens AG86]
gi|256793548|gb|ACV24217.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens
AG86]
Length = 634
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++ + GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTEKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K+ ++K+F GD F VF V S + +++ EPCI+ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCIILATSGMLTG 510
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|392568293|gb|EIW61467.1| hypothetical protein TRAVEDRAFT_162694 [Trametes versicolor
FP-101664 SS1]
Length = 943
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 128 CIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSSGLDIGACNWII-SGAKGNIAYIS 183
+ V D V LR+ + G L I F++G +G W I S + G I Y
Sbjct: 171 TVQQVHDAFDSVNVLRYSQPCHLQGKCQGLTIIPFNAGHTLGGTIWKIRSPSAGTILYAV 230
Query: 184 GSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS-TEDIDQSSFSDDNNNWEELMNSLSNY 242
N +D QGS ++ L+ D D ++++ +
Sbjct: 231 DMNHMRERHLDGTVLIRQGSTGGVFESLARPDLLITDAERANVT---------------- 274
Query: 243 DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYII 302
+ ++ + + C ++ + S+L+P + L+LL + S LK PI ++
Sbjct: 275 --TARRKDRDSALLDCVTATLSSRNSLLLPCDSSTRVLELLVLLDQHWNYSRLKYPICLL 332
Query: 303 SSVAEELLAYTNTIPEWL 320
S E+L + ++ EWL
Sbjct: 333 SRTGREMLTFVRSMMEWL 350
>gi|27372065|gb|AAN87883.1| FEG protein [Arabidopsis thaliana]
Length = 613
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 263
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 264 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 324 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFAIPGMLCAGLSLEV 335
Query: 383 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 427
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALLGYSVAGTVGHKLMAGKPTTVDLHNGTKVDVRCKVHQVAFSPHTDA 395
Query: 428 QKVQPLLKILQPKLVLF 444
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|14591202|ref|NP_143278.1| mRNA 3'-end processing factor [Pyrococcus horikoshii OT3]
gi|294979445|pdb|3AF5|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii
gi|294979446|pdb|3AF6|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii Complexed With Rna-Analog
gi|3257827|dbj|BAA30510.1| 651aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 651
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + +++K GG VLIP VG +++ + + +++PIY+ +
Sbjct: 406 EEAEKR--LIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDGMIW 463
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSNEP 515
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|449460766|ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 138/370 (37%), Gaps = 61/370 (16%)
Query: 93 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 149
+GP +M + + L P L RK+ + G H+ +C+ KV + +
Sbjct: 86 NGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTND---HIMECLKKVVPVDLKQTIQ 142
Query: 150 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209
+ L I+A+ +G +GA + + Y N + DL++
Sbjct: 143 VDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLI-- 200
Query: 210 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 269
TE ++ D S Y E E L + +C + +GG V
Sbjct: 201 -------TESTYATTIRD------------SKY---AREREFLKAVHNC----LASGGKV 234
Query: 270 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 329
LIP +G +L + + E +LK PIY+ + + + Y + W ++ +E
Sbjct: 235 LIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYT 294
Query: 330 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389
+ + K + F + +++ PC++F+ + G ++ + +RW+
Sbjct: 295 TRNAF-------DFKNVQKF-----DRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPS 342
Query: 390 HNSLLVLENEVDAELA---VLPFKP------------ISMKVLQCSFLSGKKLQKVQPLL 434
+L+ L A ++ KP + +V Q +F + + L+
Sbjct: 343 KLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLV 402
Query: 435 KILQPKLVLF 444
K L PK V+
Sbjct: 403 KFLSPKHVIL 412
>gi|333910570|ref|YP_004484303.1| beta-lactamase domain-containing protein [Methanotorris igneus Kol
5]
gi|333751159|gb|AEF96238.1| beta-lactamase domain protein [Methanotorris igneus Kol 5]
Length = 419
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ +G ++L I ++ LK +P+Y+ S+ Y + + +W
Sbjct: 203 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLKDVPVYVDGSLIHATGIYMSYL-DW 261
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K + E +++ F + + +EPCI+ S ++ GP
Sbjct: 262 LNPK--------------LKNMVENRVNPFGELKKADNSVFNKEPCIIISTSGMVQGGPV 307
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 426
+ L N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 LQYLSLLKSPKNKLILTGYQAEGTLGRELEEGAEEITPFKNKIPVRGKVVKIEFSAHGDY 367
Query: 427 LQKVQPLLKILQPK--LVLFPEEWRTHVSFS 455
V+ + KI PK V+ E ++T +SF+
Sbjct: 368 NSLVRYIKKIPTPKKAFVVHGERYQT-LSFA 397
>gi|312135668|ref|YP_004003006.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
owensensis OL]
gi|311775719|gb|ADQ05206.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
owensensis OL]
Length = 821
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 152/370 (41%), Gaps = 80/370 (21%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + + I+ F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPVEGIRVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDRASVPKIRPDIV------------ 189
Query: 219 DIDQSSFSD---DNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 275
I +S++ D N ++EE E+L + + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEE---------------ERL---FNTIFEVISQGGKVLIPAFA 230
Query: 276 VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 335
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+ +F
Sbjct: 231 IGRAQEVILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEEIF 289
Query: 336 --AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 393
++ ++ +KK + +++ +PC++ S L GP++ + N+L
Sbjct: 290 LADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSLFYAEKIVQSQNAL 341
Query: 394 LVLENEVDA--------ELAVLP--FKPISM---------KVLQCSFLSGKKLQKVQPLL 434
+ + D ELA LP K I++ +V + + K+ L
Sbjct: 342 VAITGYQDEEAPGRKLLELAELPESEKKINLNGKEYEVKCRVEKYGLSAHSDRDKILGFL 401
Query: 435 KILQPKLVLF 444
L+P+ V+F
Sbjct: 402 ATLRPRTVIF 411
>gi|289192183|ref|YP_003458124.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp.
FS406-22]
gi|288938633|gb|ADC69388.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp.
FS406-22]
Length = 634
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRRVIDSDEPCVILATSGMLTG 510
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|15668334|ref|NP_247130.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus
jannaschii DSM 2661]
gi|2495836|sp|Q57626.1|Y162_METJA RecName: Full=Uncharacterized protein MJ0162
gi|1590919|gb|AAB98146.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus
jannaschii DSM 2661]
Length = 421
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ +G ++L I ++ L+ +PIY S+ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLRDVPIYTDGSLIHATAVYMSYI-NW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPK--LLMNWQEPCIVFSPHWSLRLG 377
L + +K + E +I+ F + L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGEIKKADESLVFN-KEPCIIVSTSGMVQGG 307
Query: 378 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 424
P + L+ N L++ + + L + PFK PI KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPIRGKVVKIEFSAHG 367
Query: 425 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 455
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|330835859|ref|YP_004410587.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
gi|329567998|gb|AEB96103.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
Length = 638
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 25/154 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
+++ GG VLIP+ VG +++ I M+ + ++P+Y+ + + +E+ A PEW
Sbjct: 400 NTINRGGKVLIPVLAVGRGQEIMLVINDAMKKKMIPEVPVYV-TGLFDEVTAIHTAYPEW 458
Query: 320 LCKQ-------RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHW 372
L K+ + E F+ D LF ++ +E H EP I+ +
Sbjct: 459 LGKEVRDSILFKDENPFTSD-LFKRIEGYREDVAH--------------GEPSIILATSG 503
Query: 373 SLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
L GP + + + D NSL+ + + + L
Sbjct: 504 MLNGGPAVEFFKELAPDSRNSLVFVSYQAEGTLG 537
>gi|378756880|gb|EHY66904.1| cleavage and polyadenylation specificity factor subunit 3
[Nematocida sp. 1 ERTm2]
Length = 501
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 41/207 (19%)
Query: 259 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISS-------VAEELLA 311
+ VK GG VLIP+ +G +L + E S L IPIY ++ + ++ +
Sbjct: 225 VVQCVKNGGKVLIPVFALGRAHELCLLLDTHWEKSKLSIPIYTSATLTHKANDIYKQFID 284
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371
YT+ +R LF F HVK L + + P I+FS
Sbjct: 285 YTHEHIRNTMHKRN--LFD----FQHVKQFDSN-------------LASLEGPMILFSSP 325
Query: 372 WSLRLGPTIHLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVL 417
L GP++ + ++W GD +++ VL E+ + + P+ MKV
Sbjct: 326 GMLHSGPSLSIFKKWCGDPKNMVIFPGYCVRGTIGERVLNGASQIEVGGIVY-PVRMKVK 384
Query: 418 QCSFLSGKKLQKVQPLLKILQPKLVLF 444
F + + + L++ +P+ ++
Sbjct: 385 NMPFSAHADQKGILSLVQQCEPENIIL 411
>gi|221502797|gb|EEE28511.1| RNA-metabolising metallo-beta-lactamase domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1072
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 366 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 425
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
W + + DP A H+ P S L++ P ++ + L
Sbjct: 426 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 477
Query: 375 RLGPTIHLLRRWSGDHNSLLVL 396
G + L+ W GD +L++L
Sbjct: 478 HGGLALKALKAWGGDPATLVLL 499
>gi|430813604|emb|CCJ29043.1| unnamed protein product [Pneumocystis jirovecii]
gi|430813606|emb|CCJ29045.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 26/233 (11%)
Query: 132 VKDCISKVQTLRFGEEACYNGIL---IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 188
+ + + TLR+ + +G L I A++SG +G W I+ NI Y N
Sbjct: 106 IDNAFDSIITLRYSQPISLSGKLNGISITAYNSGHSLGGTIWKITKDSENIVYCVNWN-- 163
Query: 189 SGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 248
H+ D + GS ILYS+ + LD+ I + D N SN +
Sbjct: 164 --HSKD---SHLNGS--ILYSNGTILDAL--IRPTILITDAIN--------SNISIPSRK 206
Query: 249 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 308
AF S +++ G+VLIP + L+ + + + +L+ PIY +S +
Sbjct: 207 KRTEAFFDSIK-NTLAQQGNVLIPTDAATRSLEFCWILDRYWKQHNLQYPIYFLSHTGNK 265
Query: 309 LLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLM 359
++Y ++ EW+ + S + F +VK+I + V PK+++
Sbjct: 266 AISYAQSMIEWMSDSIISEYGSSGSVFEFTYVKVITN-EFQFLSMVSGPKVIL 317
>gi|157876175|ref|XP_001686447.1| putative cleavage and polyadenylation specificity factor
[Leishmania major strain Friedlin]
gi|68129521|emb|CAJ08064.1| putative cleavage and polyadenylation specificity factor
[Leishmania major strain Friedlin]
Length = 756
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 136/367 (37%), Gaps = 88/367 (23%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F ++++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDP-LFAHVK 339
+ F + IPIY SS+A+ + Y + + +Q+ +P +F +++
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPFVFKYIR 322
Query: 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 398
+ + K PC+V + L+ G ++ L RW GD N +++
Sbjct: 323 SLMDTKS------------FEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAGY 370
Query: 399 EVDAELA 405
VD +A
Sbjct: 371 CVDGTIA 377
>gi|320170221|gb|EFW47120.1| integrator complex subunit 11 [Capsaspora owczarzaki ATCC 30864]
Length = 661
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 40/267 (14%)
Query: 130 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 189
A++K C+ KV + E + + IKA+ +G +GA + + ++ Y N
Sbjct: 123 ANIKACMKKVIAVNLHESVRVDDEIEIKAYYAGHVLGAAMFHVRVGSESVVYTGDFNMTP 182
Query: 190 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 249
+ + DL++ TE ++ D N E
Sbjct: 183 DRHLGAAWIDRCRPDLLI---------TESTYATTIRDSKRN---------------REG 218
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEEL 309
E L I C V+ GG VLIP+ +G +L + + E L +P+Y + + +
Sbjct: 219 EFLRKIHEC----VEQGGKVLIPVFALGRAQELCILVETYWERLGLTVPVYFSAGLTAKA 274
Query: 310 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 369
Y W Q+ ++ F +F + K I F + ++ P ++F+
Sbjct: 275 NNYYKLFITW-TNQKIKRTFVERNMF------EFKHIKPF-----DRAFLDNPGPMVLFA 322
Query: 370 PHWSLRLGPTIHLLRRWSGDHNSLLVL 396
L G ++ R+W+ + ++++L
Sbjct: 323 TPGMLHAGMSLDAFRKWAPNDKNMVIL 349
>gi|221055463|ref|XP_002258870.1| RNA-metabolising metallo-beta-lactamase [Plasmodium knowlesi strain
H]
gi|193808940|emb|CAQ39643.1| RNA-metabolising metallo-beta-lactamase,putative [Plasmodium
knowlesi strain H]
Length = 914
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 129/332 (38%), Gaps = 64/332 (19%)
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 190
H+ CI KV L+ E G + I + +G +GAC + I ++ Y
Sbjct: 202 HIYSCIGKVVGLQINE-TYEMGNMSITPYYAGHVLGACIYKIEVNNFSVIYTG------- 253
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
DY + L + + SL+ I +S+++ Y +
Sbjct: 254 -----DYNTVPDKHL-GSTKIPSLNPEIFISESTYA--------------TYVRPTRKAS 293
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELL 310
+L +C+ + V GG VLIP+ +G +L + + + PIY + E
Sbjct: 294 ELD-LCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWRKMKINYPIYFGCGLTENAN 352
Query: 311 AYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 366
Y W+ C +K LF FA++ P V++ ++ P +
Sbjct: 353 KYYRIYSSWVNSNCVSTDKKNLFD----FANIS----------PFVNN---YLDENRPMV 395
Query: 367 VFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFK---------PI 412
+F+ L G ++ + W+G N+L+VL + V +L + K +
Sbjct: 396 LFATPGMLHTGLSLKAFKAWAGSSNNLIVLPGYCVQGTVGHKLIMGERKISFDGSSYLNV 455
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+ +++ SF + +Q L++ + P+ VLF
Sbjct: 456 ACRIIYLSFSAHADSNGIQQLIRHVLPQNVLF 487
>gi|237842097|ref|XP_002370346.1| RNA-metabolising metallo-beta-lactamase domain-containing protein
[Toxoplasma gondii ME49]
gi|211968010|gb|EEB03206.1| RNA-metabolising metallo-beta-lactamase domain-containing protein
[Toxoplasma gondii ME49]
Length = 1089
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 366 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 425
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
W + + DP A H+ P S L++ P ++ + L
Sbjct: 426 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 477
Query: 375 RLGPTIHLLRRWSGDHNSLLVL 396
G + L+ W GD +L++L
Sbjct: 478 HGGLALKALKAWGGDPATLVLL 499
>gi|261402298|ref|YP_003246522.1| KH-domain/beta-lactamase-domain-containing protein
[Methanocaldococcus vulcanius M7]
gi|261369291|gb|ACX72040.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus
vulcanius M7]
Length = 634
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCVILATSGMLTG 510
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|221482308|gb|EEE20663.1| RNA-metabolising metallo-beta-lactamase domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1090
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 374 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 433
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
W + + DP A H+ P S L++ P ++ + L
Sbjct: 434 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 485
Query: 375 RLGPTIHLLRRWSGDHNSLLVL 396
G + L+ W GD +L++L
Sbjct: 486 HGGLALKALKAWGGDPATLVLL 507
>gi|302872375|ref|YP_003841011.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575234|gb|ADL43025.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
obsidiansis OB47]
Length = 821
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 130/310 (41%), Gaps = 61/310 (19%)
Query: 105 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 160
LL +LR + + ED P A +V+D + + TL +G + + I+ F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPVEGIRVTFFP 143
Query: 161 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 218
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDKASVPKIRPDIV------------ 189
Query: 219 DIDQSSFSD---DNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 275
I +S++ D N ++EE E+L + + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEE---------------ERL---FNTIYEVISQGGKVLIPAFA 230
Query: 276 VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 335
+G +++ + +M+ + I+I V E + Y N P +L + +++ G+ +F
Sbjct: 231 IGRAQEVILILRNYMKKRKVSFNIFIDGMVREVIKVYRNN-PTYLSSRYYKRVLKGEEIF 289
Query: 336 --AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 393
++ ++ +KK + +++ +PC++ S L GP++ + N+L
Sbjct: 290 LADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSPNAL 341
Query: 394 LVLENEVDAE 403
+ + D E
Sbjct: 342 IAITGYQDEE 351
>gi|254168266|ref|ZP_04875112.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|254168398|ref|ZP_04875243.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|289595800|ref|YP_003482496.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei
T469]
gi|197622679|gb|EDY35249.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|197622775|gb|EDY35344.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|289533587|gb|ADD07934.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei
T469]
Length = 647
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSV 305
E E+L + D GG +LIP+ VG +++ + FM L ++PIY+ +
Sbjct: 403 EAAERLKDVVMRTYDK---GGKILIPVFAVGRSQEVMLVLESFMRNGELPEMPIYLDGMI 459
Query: 306 AEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE 363
E + PE+L K +E +F +P + + H +V + +++ +
Sbjct: 460 WEATTIHA-AYPEYLNKDLRELIFQKKENPFLSPI-------FHRVESVERREEVISSSD 511
Query: 364 PCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV-------------LENEVDAELAVLPFK 410
P IV S + GP + + W+ D + LV ++N + L L K
Sbjct: 512 PLIVLSTSGMMNGGPVLEYFKHWADDPRNTLVFVGYQAVGTLGRRIQNGLKEVLMSLGGK 571
Query: 411 PISMKV 416
P ++KV
Sbjct: 572 PFTVKV 577
>gi|332159620|ref|YP_004424899.1| mRNA 3'-end processing factor [Pyrococcus sp. NA2]
gi|331035083|gb|AEC52895.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2]
Length = 651
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++K GG VLIP VG +++ + + + +PIY+ + E +T PE+L
Sbjct: 419 TIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDVPIYLDGMIWEATAIHT-AYPEYLS 477
Query: 322 KQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
++ +E++F +P + + H + +++ EP I+ + L GP+
Sbjct: 478 RRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSNEPAIIIASSGMLVGGPS 530
Query: 380 IHLLRRWSGD-HNSLLVLENEVDAELA 405
+ ++ + D NS++ + + + L
Sbjct: 531 VEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|15669421|ref|NP_248231.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus
jannaschii DSM 2661]
gi|2496166|sp|Q58633.1|Y1236_METJA RecName: Full=Uncharacterized protein MJ1236
gi|1591868|gb|AAB99240.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus
jannaschii DSM 2661]
Length = 634
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDRGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCVILATSGMLTG 510
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|440800837|gb|ELR21870.1| integrator complex subunit 9, putative, partial [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG- 190
V++ ISKV + F + G++ SSG +G+ NWI+ + Y++ S+ + G
Sbjct: 25 VEEAISKVHRVSFHQHINLLGVMEAVPVSSGFALGSANWILRTDNEKVIYVADSSLSPGR 84
Query: 191 HAMDFDYRAIQGSDLILYSDLS 212
H D D+++ + LS
Sbjct: 85 HPQPLDNTLFSNCDMMIMTSLS 106
>gi|67624341|ref|XP_668453.1| ENSANGP00000013258 [Cryptosporidium hominis TU502]
gi|54659666|gb|EAL38233.1| ENSANGP00000013258 [Cryptosporidium hominis]
Length = 750
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 315
C +K GG VLIP+ +G +L + I+ ++ PI+ S+ E+ +Y
Sbjct: 241 CEMVYSCLKRGGKVLIPVFAIGRAQELCILLEIYWRRMQIRFPIFFGGSMTEKANSYYQL 300
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
W + +F+ HV P K ++ P ++F+ L
Sbjct: 301 FTNWTNTPLADNIFTFP--------------HVLPY---DKSILTLSGPAVLFATPGMLH 343
Query: 376 LGPTIHLLRRWSGDHNSLLVL 396
G ++ + W+ D N+L ++
Sbjct: 344 TGLSLQAFKMWAPDSNNLTII 364
>gi|134045242|ref|YP_001096728.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C5]
gi|132662867|gb|ABO34513.1| beta-lactamase domain protein [Methanococcus maripaludis C5]
Length = 422
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
+++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIDNGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPK--------------IKNAIENRINPFGNLIKGGDEVFSREPCIIISTSGMVQGGPV 308
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSF 421
+ L N +++ + + + V PFK P++ KV++ F
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEF 362
>gi|66357778|ref|XP_626067.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II]
gi|46227299|gb|EAK88249.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II]
Length = 751
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 315
C +K GG VLIP+ +G +L + I+ ++ PI+ S+ E+ +Y
Sbjct: 243 CEMVYSCLKRGGKVLIPVFAIGRAQELCILLEIYWRRMQIRFPIFFGGSMTEKANSYYQL 302
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
W + +F+ HV P K ++ P ++F+ L
Sbjct: 303 FTNWTNTPLADNIFTFP--------------HVLPY---DKSILTLSGPAVLFATPGMLH 345
Query: 376 LGPTIHLLRRWSGDHNSLLVL 396
G ++ + W+ D N+L ++
Sbjct: 346 TGLSLQAFKMWAPDSNNLTII 366
>gi|45358944|ref|NP_988501.1| beta-lactamase-like protein [Methanococcus maripaludis S2]
gi|340624691|ref|YP_004743144.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
gi|45047810|emb|CAF30937.1| Beta-lactamase-like:ATP/GTP-binding site motif A (P-loop)
[Methanococcus maripaludis S2]
gi|339904959|gb|AEK20401.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
Length = 422
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
+++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIDNGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + + + E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPKIKNAI--------------ENRINPFGNLIKGGDEVFSREPCIIISTSGMVQGGPV 308
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSF 421
+ L N +++ + + + V PFK P++ KV++ F
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEF 362
>gi|47229058|emb|CAG03810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 698
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++++ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 295 ETIERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 354
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
++ ++ F + + K I F ++ + P +VF+ L G ++
Sbjct: 355 NQKIRKT-------FVQRNMFEFKHIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSL 402
Query: 381 HLLRRWSGDHNSLL 394
+ ++W+G+ +++
Sbjct: 403 QIFKKWAGNEKNMV 416
>gi|340383473|ref|XP_003390242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Amphimedon queenslandica]
Length = 726
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 131/329 (39%), Gaps = 64/329 (19%)
Query: 136 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF 195
+ K++ + F +E +GI A+++G +GA ++I A + Y
Sbjct: 183 MDKIEIINFHQEVDVSGIKFT-AYNAGHVLGAAMFMIEIAGVKVLYTG------------ 229
Query: 196 DYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM--EKLA 253
D+ ++ L+ ++ N+ +++ S S Y + E ++ A
Sbjct: 230 DFSRVEDRHLMA------------------AEVPNSSPDILISESTYGTHIHEKREQREA 271
Query: 254 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLA 311
+ D V GG LIP+ +G +LL + + C IPIY SS+A++ +A
Sbjct: 272 RFTTKIHDIVTRGGHCLIPVFALGRAQELLLILDEYWSCHPELHDIPIYYASSLAKKCMA 331
Query: 312 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFS 369
T + ++ + ++ +P VF + S K + N+ + PC++ +
Sbjct: 332 VYQTYIGAMNERIRRQIGISNPF-------------VFKHISSLKNIDNFDDIGPCVILA 378
Query: 370 PHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA---------VLPFK----PISMK 415
++ G + L W D N ++V V+ LA V+ P+ M
Sbjct: 379 SPGMMQSGLSRQLFESWCTDKRNGVVVAGYCVEGTLAKHILSEPSEVVTMNGQKLPLRMS 438
Query: 416 VLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
V SF + ++ ++IL P ++
Sbjct: 439 VDYISFSAHTDYEQTSEFIRILNPPHIVL 467
>gi|326495752|dbj|BAJ85972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 726
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 135/362 (37%), Gaps = 86/362 (23%)
Query: 1 MSYLIAHWTFRHSQSFL-------HCQMIFIKLYARKI----LILKTGRSPMGMLGLPFL 49
+ YL+A FR FL HC ++ AR +L + M + LP+
Sbjct: 7 LCYLLAVDGFR----FLLDCGWTDHCDPALLQPLARVAPTIDAVLLSHPDMMHLGALPYA 62
Query: 50 TRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 109
+ G SA +Y TE R+G L M Y F +W+ + +
Sbjct: 63 IKHLGLSAPVYATEPVYRLGLLTM---------YDYFLS----------RWQVADFDLFS 103
Query: 110 LRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACN 169
L ++ +A +K S+ L+ E ++I SG +G
Sbjct: 104 L---------DDIDAAFQNVARLK--YSQNHLLKDKGEG-----IVIAPHVSGHLLGGTV 147
Query: 170 WIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTEDIDQSSFS 226
W I+ ++ Y A+DF++R + G+ L SF
Sbjct: 148 WKITKDGEDVVY----------AVDFNHRKERHLNGTTL-----------------GSFV 180
Query: 227 DDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI 286
+ N+L+N + + + FI S + + GGSVL+P++ G L+LL +
Sbjct: 181 RPAVLITDAYNALNN--QVYKRQQDQDFIDSM-VKVLSGGGSVLLPVDTAGRVLELLLTM 237
Query: 287 AIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK---QRQEKLFSGDPLFAHVKLIKE 343
+ L PIY +++V+ + + + EW+ + E L HV LI
Sbjct: 238 EQYWAQRHLVYPIYFLTNVSTSTVDFVKSFLEWMSDSISKSFEHTRDNAFLLRHVSLIIN 297
Query: 344 KK 345
K+
Sbjct: 298 KE 299
>gi|261327437|emb|CBH10412.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei gambiense DAL972]
Length = 770
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 139/371 (37%), Gaps = 96/371 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 106 ALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFL------RIGASAEDIVNNEWLQ----- 154
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I K++T+ + EE NGI + F++G
Sbjct: 155 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 184
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 185 LGAALFMVDIAGMKLLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 237
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
E+ + + D VK GG L+P+ +G +LL
Sbjct: 238 E----------------------SREERESLFTTWVHDVVKGGGRCLVPVFALGRAQELL 275
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
+ + E IPIY SS+A QR KL+ + ++
Sbjct: 276 LILEEYWEAHKELQHIPIYYASSLA----------------QRCMKLYQTFVSAMNDRVK 319
Query: 342 KEKKIH----VFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 394
K+ + H VF + S ++++ PC+V + L+ G ++ L RW GD N ++
Sbjct: 320 KQHENHRNPFVFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGII 379
Query: 395 VLENEVDAELA 405
V VD +A
Sbjct: 380 VAGYCVDGTIA 390
>gi|429327273|gb|AFZ79033.1| hypothetical protein BEWA_018780 [Babesia equi]
Length = 878
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 48/289 (16%)
Query: 137 SKVQTLRFGEEACY-------NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 189
++ LR+ E CY N + + ++G IG W+I +I
Sbjct: 140 TQCSKLRYKETHCYSKSFNNTNVKISCRPINNGCSIGGALWVIDVGFSSI---------- 189
Query: 190 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSD----DNNNWEELMNSLSNYD-- 243
I G D +YS S L + D+D + D ++ + + +NY
Sbjct: 190 ----------ICGDDFRMYS--SVLLNPIDLDHIARPDVLIINHESSKVREEEKTNYKGR 237
Query: 244 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYII 302
E + + L + + + ++ GGSVLIP N + LL + + L I ++
Sbjct: 238 EKIYQFHDLDLLINKMVGTLNDGGSVLIPSNIDHTLINLLVTLNFVWATADLSHYKIVLV 297
Query: 303 SSVAEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMN 360
S VA+++L T E++ +PL + H+ P S LL
Sbjct: 298 SPVADKILLLVGTCLEYMKSNLYHNFIKTLWNPL--------QNINHITPLT-SLNLLSK 348
Query: 361 WQ-EPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLP 408
+Q P I S S+ G T L + H +L++L +D L +P
Sbjct: 349 YQYAPTIFISTCNSIHFGFTSFLFVSLASYHKNLIILSKPIDGILKYVP 397
>gi|72387720|ref|XP_844284.1| cleavage and polyadenylation specificity factor subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359436|gb|AAX79873.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei]
gi|70800817|gb|AAZ10725.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 770
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 139/371 (37%), Gaps = 96/371 (25%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 106 ALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFL------RIGASAEDIVNNEWLQ----- 154
Query: 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164
I K++T+ + EE NGI + F++G
Sbjct: 155 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 184
Query: 165 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 223
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 185 LGAALFMVDIAGMKLLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 237
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
E+ + + D VK GG L+P+ +G +LL
Sbjct: 238 E----------------------SREERESLFTTWVHDVVKGGGRCLVPVFALGRAQELL 275
Query: 284 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 341
+ + E IPIY SS+A QR KL+ + ++
Sbjct: 276 LILEEYWEAHKELQHIPIYYASSLA----------------QRCMKLYQTFVSAMNDRVK 319
Query: 342 KEKKIH----VFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 394
K+ + H VF + S ++++ PC+V + L+ G ++ L RW GD N ++
Sbjct: 320 KQHENHRNPFVFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGII 379
Query: 395 VLENEVDAELA 405
V VD +A
Sbjct: 380 VAGYCVDGTIA 390
>gi|375082947|ref|ZP_09729988.1| Cleavage and polyadenylation specificity factor subunit like
protein [Thermococcus litoralis DSM 5473]
gi|374742377|gb|EHR78774.1| Cleavage and polyadenylation specificity factor subunit like
protein [Thermococcus litoralis DSM 5473]
Length = 651
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 241 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 300
+Y EE EK + + ++K G VLIP VG +++ + + L +PIY
Sbjct: 400 DYQMPREEAEKR--LIEVILQTIKRKGKVLIPAMAVGRAQEIMIALEDYARVGGLDVPIY 457
Query: 301 IISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHS 354
+ + E +T PE+L K + ++F + +F V E+K
Sbjct: 458 LDGMIWEATAIHT-AYPEYLSKNLRNQIFHEGYNPFLNEIFKPVANANERKD-------- 508
Query: 355 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
++ +EP I+ + L GP++ + + D NSL+ + + + L
Sbjct: 509 ---IIESEEPAIIIASSGMLVGGPSVEYFKHLAPDPRNSLIFVSYQAEGTLG 557
>gi|150401471|ref|YP_001325237.1| beta-lactamase domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150014174|gb|ABR56625.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3]
Length = 426
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWL 320
+++ GG V+IP+ VG +++ + +M LK +PIY+ S+ Y + EWL
Sbjct: 206 TIEKGGKVIIPVFAVGRSQEIIAVLHNYMRSKLLKRVPIYVEGSLVHTTGIYMSH-SEWL 264
Query: 321 CKQRQEKLFSGDPLFAHVKLI-KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
+ + L + F V ++ KE ++ +EPCI+ S ++ GP
Sbjct: 265 NPKIRNNLENRINPFGDVTIVNKENSSEIY-----------NKEPCIIISTSGMVQGGPI 313
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 427
+ L+ N +++ + + L + PF+ P+ +V++ F +
Sbjct: 314 LQYLKLLKSPKNKIILTGFQAEETLGRQLEDGAEEITPFRNKIPVRGEVVKVEFSAHSDY 373
Query: 428 QK-VQPLLKILQPKLVL 443
++ + KI +PK V
Sbjct: 374 NSLIRYMKKIPKPKKVF 390
>gi|374636870|ref|ZP_09708413.1| RNA-metabolising metallo-beta-lactamase [Methanotorris formicicus
Mc-S-70]
gi|373557613|gb|EHP84014.1| RNA-metabolising metallo-beta-lactamase [Methanotorris formicicus
Mc-S-70]
Length = 419
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ +G ++L I ++ LK +P+Y+ S+ Y + + +W
Sbjct: 203 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLKDVPVYVDGSLIHATGIYMSYL-DW 261
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K + E +I+ F + + +EPCI+ S ++ GP
Sbjct: 262 LNPK--------------LKNMVENRINPFGELKKADNGVFNKEPCIIVSTSGMVQGGPV 307
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 426
+ L N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 LQYLSLLKSPKNKLILTGYQAEGTLGRALEEGVEEITPFKNKIPVRGKVVKIEFSAHGDY 367
Query: 427 LQKVQPLLKILQPK 440
V+ + KI PK
Sbjct: 368 NSLVRYIKKIPTPK 381
>gi|15920543|ref|NP_376212.1| cleavage and polyadenylation specificity factor large subunit
[Sulfolobus tokodaii str. 7]
gi|342306155|dbj|BAK54244.1| putative ribonuclease J [Sulfolobus tokodaii str. 7]
Length = 637
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 178 NIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMN 237
N +I GS A H D G+ I+Y+ T+ +D+++ D+ + ++
Sbjct: 325 NAGHILGSAMAHLHIGD-------GTHNIVYTGDFKYARTKLLDKAN--DEFPRVDTIIM 375
Query: 238 SLSNYDESVEEMEKL-AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL- 295
+ D E E+ A + ++ GG VLIP+ VG +++ + M+ +
Sbjct: 376 ETTYGDHEQENREEAEAKLIEIINRTISRGGRVLIPVLAVGRGQEIMLVLNDAMKKKLIP 435
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVH 353
++PIY+ + + EE+ A N PE L ++ +E + D P + F +
Sbjct: 436 EVPIYV-TGLVEEITAIHNAYPEMLSREVREAILYKDENPFMS----------EFFHRIE 484
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+ + EP I+ + L GP + + + D NS++ + + + L
Sbjct: 485 GYREDIAQGEPSIILATSGMLNGGPAVEFFKTMAPDSRNSIIFVSYQAEGTLG 537
>gi|327408312|emb|CCA30123.1| unnamed protein product [Neospora caninum Liverpool]
Length = 1183
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
C+ D++ GG VLIP+ VG +L + + E L PIY + E Y
Sbjct: 495 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLHFPIYFAGGMTERANVYYR 554
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 374
W +GD L H+ P S L++ P ++ + L
Sbjct: 555 LYVHWSKANGSVDAGAGDELPTSAFSFP----HILPFQSS---LLSAPTPLVLLATPGML 607
Query: 375 RLGPTIHLLRRWSGDHNSLLVL 396
G + L+ W+GD +L++L
Sbjct: 608 HGGLALKALKAWAGDQANLVLL 629
>gi|159905675|ref|YP_001549337.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C6]
gi|159887168|gb|ABX02105.1| beta-lactamase domain protein [Methanococcus maripaludis C6]
Length = 422
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K E +I+ F + +EPCI+ S ++ GP
Sbjct: 263 LNPK--------------IKNAIENRINPFGNLIKGGDEAFSKEPCIIISTSGMVQGGPV 308
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSF 421
+ L N +++ + + + V PFK P++ KV++ F
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEF 362
>gi|326916480|ref|XP_003204535.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Meleagris gallopavo]
Length = 759
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 279 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 338
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 339 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 385
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 386 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 445
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 446 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 503
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 504 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 563
Query: 516 GKHQLL 521
+ +L
Sbjct: 564 FNYHIL 569
>gi|150402550|ref|YP_001329844.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C7]
gi|150033580|gb|ABR65693.1| beta-lactamase domain protein [Methanococcus maripaludis C7]
Length = 422
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + +K E +I+ F + +EPCI+ S ++ GP
Sbjct: 263 LNPK--------------IKNAIENRINPFGNLIKGGDEAFSKEPCIIISTSGMVQGGPV 308
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSF 421
+ L N +++ + + + V PFK P++ KV++ F
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEF 362
>gi|336054997|ref|YP_004563284.1| hypothetical protein WANG_1487 [Lactobacillus kefiranofaciens ZW3]
gi|333958374|gb|AEG41182.1| Hypothetical protein WANG_1487 [Lactobacillus kefiranofaciens ZW3]
Length = 242
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKL 427
F PH LGPTI W N++DA + +L F + + + GK
Sbjct: 23 FIPHHYTNLGPTIKETMTWQN--------FNKIDANVNLLDFNLQASNHPKVVYHGGK-- 72
Query: 428 QKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAAD 487
K++PL+K+ KL++ R H FS + S +Y TI++P K+ ++++ D
Sbjct: 73 -KIKPLVKVRDGKLII-----RNHHHFSININSSEDNY---LTIYLPK-KQLTKIKVNTD 122
Query: 488 IASKFQWRMLKQKKLNITRLKGRLFVN 514
+ + KKL + G + N
Sbjct: 123 DGDITSYGKVNAKKLALHSDDGDINAN 149
>gi|384499309|gb|EIE89800.1| hypothetical protein RO3G_14511 [Rhizopus delemar RA 99-880]
Length = 654
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 113/288 (39%), Gaps = 35/288 (12%)
Query: 263 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWL 320
V GG L+P+ +G +LL + F E IPIY SS+A+ +A T +
Sbjct: 221 VTRGGRCLMPVFALGRAQELLLILDEFWEAHPELDSIPIYYASSLAKRCMAVYQTYINMM 280
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGP 378
+ +++ +P VF + + K + +++ PC++ + L+ G
Sbjct: 281 NARIRKQFAISNPF-------------VFKHISNLKNVEQFEDSGPCVMMASPGMLQNGL 327
Query: 379 TIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFK---------PISMKVLQCSFLSG 424
+ L RW+ D + LV+ EN + + P P+ M V SF +
Sbjct: 328 SRELFERWAPDKKNGLVITGYCVENTLARQAMNEPSDFQAMDGRKVPLKMSVDYISFSAH 387
Query: 425 KKL-QKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 483
Q + + ++ P ++L E S EN TI+ P ++ +L
Sbjct: 388 VDFTQNSKFIDEVKAPHVILVHGEANAMYRLKSALQSKYSEKEENVTIYTPKNCDTVKLH 447
Query: 484 IAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL-PE--NEPGG 528
+ +K R+ + L G L V + ++ PE NE GG
Sbjct: 448 FRGEKMAKTIGRLAAKYPTENQALNGVLLVKDFQLNIMSPEDLNELGG 495
>gi|213409816|ref|XP_002175678.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275]
gi|212003725|gb|EEB09385.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275]
Length = 771
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 249 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVA 306
++K A + + +V+ GG VL+P+ +G +LL + + + +PIY SS+A
Sbjct: 194 LDKEARLLNLVHTTVRNGGRVLMPVFALGRAQELLLILDEYWHSHAELRSVPIYYASSLA 253
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPC 365
+ +A T + + ++ +P +F ++K + + I F + P
Sbjct: 254 RKCMAVYQTYINMMNDKIRKAFAERNPFIFRYIKSL--RSIDKFDDIG----------PS 301
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSG 424
++ + L+ G + LL RW+ D N+LL+ V+ +A L I+ + ++ + LSG
Sbjct: 302 VILASPGMLQNGVSRTLLERWAPDARNTLLLTGYSVEGTMAKL----IANEPIEITTLSG 357
Query: 425 KKLQK 429
+K+ +
Sbjct: 358 QKIPR 362
>gi|147905468|ref|NP_001088278.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus
laevis]
gi|54038587|gb|AAH84286.1| LOC495111 protein [Xenopus laevis]
Length = 692
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 69/381 (18%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 307
E+ A C+ D V GG LIP+ +G +LL + + + IPIY SS+A+
Sbjct: 224 EREARFCNTVHDIVNRGGRSLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAK 283
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ +A T + + ++++ +P VF + + K + ++ + P
Sbjct: 284 KCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNLKSMDHFDDIGPS 330
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA---------VLPFK----P 411
+V + ++ G + L W D N +++ V+ LA ++ P
Sbjct: 331 VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEIVTMSGQKLP 390
Query: 412 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENE-- 469
+ M V SF + Q+ ++ L+P V+ + + + + + + Y +NE
Sbjct: 391 LKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKAALIREYEDNEEV 448
Query: 470 --TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VNHGKHQLLPENEP 526
+H P E+ L + +K + +K R+ G L N H L P +
Sbjct: 449 DIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQAQRISGILVKRNFNYHILCPSDLS 508
Query: 527 GGSS---------QTRPFLHWGSPDPENLL-AELSKMGINGSVERCMTDAESEDGFTVKV 576
+ Q PF P NLL +L ++ G VE ++
Sbjct: 509 SYTDLAMSTVTQKQAIPF-----TGPFNLLFCQLQQL--TGDVE--------------EI 547
Query: 577 QDPEKSMIEVRAAVTVISAAD 597
+ EK + V AVTV+ AD
Sbjct: 548 EVNEKDALRVFKAVTVVKDAD 568
>gi|352683091|ref|YP_004893615.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
gi|350275890|emb|CCC82537.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
Length = 635
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++++ GG VLIP G ++L + M SL K PIY+ + E L AY P +
Sbjct: 394 ETIERGGKVLIPAFSTGRAQEILYILNREMNKGSLKKAPIYVDGMIVETLNAYL-MYPHF 452
Query: 320 LCKQRQEKLFSGDPLF---AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRL 376
L ++ E++++G F ++++I+ K K++ + Q P ++ +PH L
Sbjct: 453 LNREVAEEIYNGINPFTSSGNIQIIERAKRLEDRINQVAKIVQDGQ-PGVIIAPHGMLNG 511
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP + + D + L+
Sbjct: 512 GPILEYFVHLAPDPANKLIF 531
>gi|333910182|ref|YP_004483915.1| KH-domain/beta-lactamase-domain-containing protein [Methanotorris
igneus Kol 5]
gi|333750771|gb|AEF95850.1| KH-domain/beta-lactamase-domain protein [Methanotorris igneus Kol
5]
Length = 635
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETLQRGGKVLIPVFGVGRAQELMLVLEEGYNQGVFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K + ++F GD F VF V S + +++ EPCI+ + L
Sbjct: 461 SKVIRNRIFHEGDNPFLS---------EVFKRVGSTNERRRVIDSDEPCIILATSGMLTG 511
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ + + D + LV
Sbjct: 512 GPSVEYFKNLAPDEKNTLVF 531
>gi|374636367|ref|ZP_09707940.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
gi|373559249|gb|EHP85554.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
Length = 635
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
++++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETLQRGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 376
K + ++F GD F VF V S + +++ EPCI+ + L
Sbjct: 461 SKVIRNRIFHEGDNPFLS---------EVFKRVGSTNERRRVIDGDEPCIILATSGMLTG 511
Query: 377 GPTIHLLRRWSGDHNSLLVL 396
GP++ + + D + LV
Sbjct: 512 GPSVEYFKNLAPDEKNTLVF 531
>gi|260942135|ref|XP_002615366.1| hypothetical protein CLUG_04248 [Clavispora lusitaniae ATCC 42720]
gi|238850656|gb|EEQ40120.1| hypothetical protein CLUG_04248 [Clavispora lusitaniae ATCC 42720]
Length = 940
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 31/255 (12%)
Query: 129 IAHVKDCISKVQTLRFGEE--ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 186
++ V + K+ ++++ + A N IL+ A++SG +G W+I+ I Y N
Sbjct: 119 VSDVDEWFDKMTSVKYFQNMTALENRILLT-AYNSGHTLGGSFWLITKRLEKIIYAPTWN 177
Query: 187 FASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESV 246
H+ D + S +SSL I S+ EL +++S+
Sbjct: 178 ----HSKDSFLNSASFLSPTTGSPISSLVRPSAIITST---------ELGSNMSHK---- 220
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-ECSSLKIPIYIISSV 305
+ MEK + + + GG+VL+P G FL+LL I + IP+Y +S
Sbjct: 221 KRMEKFLQLVDATLAN---GGAVLLPTTISGRFLELLRIIDEHLANLQGAAIPVYFLSYS 277
Query: 306 AEELLAYTNTIPEWLCKQ---RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ 362
++L+Y + +W+ Q E + + D ++ V + K+ + + +P+ L+
Sbjct: 278 GTKVLSYAANLLDWMSSQLIKEYEGIAAEDRAYSRVPF-EPSKVDL---LSNPQELIQLP 333
Query: 363 EPCIVFSPHWSLRLG 377
P IVF+ + G
Sbjct: 334 GPKIVFASGIDFKDG 348
>gi|337284211|ref|YP_004623685.1| mRNA 3'-end processing factor [Pyrococcus yayanosii CH1]
gi|334900145|gb|AEH24413.1| mRNA 3'-end processing factor, putative [Pyrococcus yayanosii CH1]
Length = 648
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++K GG VLIP VG +++ + + + +PIY+ + E +T PE+L
Sbjct: 416 TIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDVPIYLDGMIWEATAIHT-AYPEYLS 474
Query: 322 KQRQEKLF--SGDPLFAHVKLIKEKKIHVFPAVHSPKL--LMNWQEPCIVFSPHWSLRLG 377
K+ +E++F +P V P +S + +++ EP I+ + L G
Sbjct: 475 KRLREQIFHEGYNPFLNEV---------FKPVANSRERQDIIDSNEPAIIIASSGMLVGG 525
Query: 378 PTIHLLRRWSGD-HNSLLVLENEVDAELA 405
P++ ++ + D NS++ + + + L
Sbjct: 526 PSVEYFKQLAPDPKNSMIFVSYQAEGTLG 554
>gi|209875817|ref|XP_002139351.1| RNA-metabolising metallo-beta-lactamase family protein
[Cryptosporidium muris RN66]
gi|209554957|gb|EEA05002.1| RNA-metabolising metallo-beta-lactamase family protein
[Cryptosporidium muris RN66]
Length = 797
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 148/418 (35%), Gaps = 83/418 (19%)
Query: 45 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104
LP+ T G+S I +T + +++ + C ME + S + E +
Sbjct: 78 ALPYFTEKIGYSGPIIMTYPTKAVSPILLADC-CKVMEQKNILSKFGSD----INTESTD 132
Query: 105 LL-PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL 163
+L P + ++G+ V C+ KV ++ + NGI I + +G
Sbjct: 133 ILKPVDPQHFSVGD--------------VWKCMEKVTAIQLHQTISVNGINI-TPYYAGH 177
Query: 164 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQS 223
+GA + + +I Y N M D S L+ D+ +ST
Sbjct: 178 VLGASMFHVEVGNESIVYTGDYN------MVRDRHLGPASIKKLFPDVLLSEST------ 225
Query: 224 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 283
+ Y + F C + ++ GG VLIP+ VG +L
Sbjct: 226 ---------------YATYIRPSRRSTERIF-CEMVLQCLEKGGKVLIPVFAVGRAQELC 269
Query: 284 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKE 343
+ F L+ PIY ++ E+ Y W + LFS
Sbjct: 270 ILLEFFWRRMQLRYPIYFGGAMTEKSSLYYQLYTNWTNTALSDDLFSFP----------- 318
Query: 344 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDA- 402
HV P S ++ P ++F+ L G ++ + W+ D N+L ++ A
Sbjct: 319 ---HVLPYDRS---VLTNTGPAVLFATPGMLHAGLSLQAFKCWAPDPNNLTIIPGFCVAG 372
Query: 403 -----------ELAVLPFKPISMKVLQC-----SFLSGKKLQKVQPLLKILQPKLVLF 444
+ + P P S ++C SF S +Q L++ ++P ++F
Sbjct: 373 TLGARIIAGAKRIILDPKDPSSSIDIRCDVKYLSFSSHADSIGIQSLIQHIEPDNIVF 430
>gi|380741511|tpe|CCE70145.1| TPA: mRNA 3'-end processing factor, putative [Pyrococcus abyssi
GE5]
Length = 648
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + ++K GG VLIP VG +++ + + ++ PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEVMMVLEDYARIGAIDAPIYLDGMIW 460
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 461 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSKERQDIIDSNEP 512
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 513 AIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 554
>gi|301092283|ref|XP_002997000.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262112189|gb|EEY70241.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 513
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 260 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 319
+ +V+ GG+VLIP + G L+L+ + + + L+ PI ++ ++ + EW
Sbjct: 5 LKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRDPIALLHDMSYYTPKAAQAMLEW 64
Query: 320 LCKQRQEKLFS---GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
C R K F +P F H+ L VH+ + L P +V + SL
Sbjct: 65 -CNDRIAKNFDVGRQNPFQFTHIHL-----------VHTLEELDALPNPKVVLATSPSLE 112
Query: 376 LGPTIHLLRRWSGD-HNSLLVLENEVDAELA--VLPF-------KPISMKVLQCSFLSGK 425
G + RW+ D NS++ + A V+ K IS V Q FL G
Sbjct: 113 CGFAKDIFIRWAPDPRNSIIFSSTTSETSFASRVVKLSKDPSAEKNISCTVTQKVFLEGA 172
Query: 426 KL 427
+L
Sbjct: 173 EL 174
>gi|14520957|ref|NP_126432.1| mRNA 3'-end processing factor, [Pyrococcus abyssi GE5]
gi|5458174|emb|CAB49663.1| Cleavage and polyadenylation specficity factor [Pyrococcus abyssi
GE5]
Length = 651
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + ++K GG VLIP VG +++ + + ++ PIY+ +
Sbjct: 406 EEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEVMMVLEDYARIGAIDAPIYLDGMIW 463
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 364
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSKERQDIIDSNEP 515
Query: 365 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 557
>gi|402217247|gb|EJT97328.1| Metallo-hydrolase/oxidoreductase [Dacryopinax sp. DJM-731 SS1]
Length = 780
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 128/330 (38%), Gaps = 40/330 (12%)
Query: 179 IAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMN 237
I +S + + +GH + IQ +DL ILY+ S + + + ++ ++
Sbjct: 150 IPGLSFTPYPAGHVLGASMFLIQLADLRILYTGDYSREESRHLVRAEVPPGAGIDVLIIE 209
Query: 238 SLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S + EK S + GG VL+P+ VG +LL + F E
Sbjct: 210 STFGVQSTEGRREKEERFTSLIHRILMRGGHVLMPVFAVGGAQELLLILDDFFEKHPELH 269
Query: 296 KIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIK-----EKKIHV 348
K PIY S++A + +A Y + RQ + +P +F HV I EKKI
Sbjct: 270 KFPIYYASALARKCMAVYQGYVHVMNNNIRQRFANNQNPFVFRHVSHIPRSSGWEKKIGE 329
Query: 349 FPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLE----------- 397
P PC++ + ++ G + LL W+ D + +VL
Sbjct: 330 GP-------------PCVILASPGMMQSGASRELLEMWAPDRRNGIVLTGYSVEGSMARN 376
Query: 398 --NEVDAELAVLPFKPISMK--VLQCSFLSGKKLQKVQPLLK-ILQPKLVLFPEEWRTHV 452
NE D E+ + PI ++ V SF + + + ++ I P +VL E
Sbjct: 377 IMNEPD-EINAMKGTPIPLRCTVDNISFSAHVDYAQNREFIEAIGAPHVVLVHGEQSQMF 435
Query: 453 SFSDVTSFSVSHYSENETIHIPSLKESAEL 482
+E+ TIH P E+ EL
Sbjct: 436 RLKAALQAGYKERNEHITIHTPKNCETLEL 465
>gi|294656507|ref|XP_002770276.1| DEHA2D07304p [Debaryomyces hansenii CBS767]
gi|199431523|emb|CAR65632.1| DEHA2D07304p [Debaryomyces hansenii CBS767]
Length = 959
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++ GG+VL+P + G FL+LL I ++ S IP+Y +S ++L+Y + + EW+
Sbjct: 233 TLANGGAVLLPTSLSGRFLELLHLIDQHLQ--SAPIPVYFLSYSGTKVLSYASNLLEWMS 290
Query: 322 KQ 323
Q
Sbjct: 291 SQ 292
>gi|68077031|ref|XP_680435.1| cleavage and polyadenylation specificity factor protein [Plasmodium
berghei strain ANKA]
gi|56501360|emb|CAH96636.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium berghei]
Length = 967
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
+C+ + V GG VLIP+ +G +L + + E + PIY + E Y
Sbjct: 292 LCNLVNECVHKGGKVLIPVFAIGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYYK 351
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVK-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 373
W+ S + + VK L I F + +N P ++F+
Sbjct: 352 IYSSWI---------SNNCVSTEVKNLFDFSNISQFSNNY-----LNENRPMVLFATPGM 397
Query: 374 LRLGPTIHLLRRWSGDHNSLLVL----------ENEVDAELAVL----PFKPISMKVLQC 419
L G + + W+ + N+L++L + E +L + ++ K++
Sbjct: 398 LHTGLALKAFKAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGSTYIYVNCKIIYL 457
Query: 420 SFLSGKKLQKVQPLLKILQPKLVLF 444
SF + +Q L+K + PK V+F
Sbjct: 458 SFSAHADSNGIQQLIKHVMPKNVIF 482
>gi|333897915|ref|YP_004471789.1| beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113180|gb|AEF18117.1| beta-lactamase domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 820
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 39/251 (15%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 212
L + +S+G GA + I G +G S F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASTYIVGNEG-------SFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
+ST + D + EL E +EK+ ++ +K GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGYV-------IKNGGKVLIP 230
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 332
+G +++ + + ++ +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMIETKVYVDGMVKDICRIYKLN-PNYLRESLAKKIFKGG 289
Query: 333 PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS 392
+F ++ P S +EPC++ S L GP+ + +GD +
Sbjct: 290 EIFFDD--------NIMPVDKSEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEKN 341
Query: 393 LLVLENEVDAE 403
L+ + D E
Sbjct: 342 LIAITGYQDEE 352
>gi|363732494|ref|XP_419942.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Gallus gallus]
Length = 672
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 192 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 251
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 252 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 298
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 299 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 358
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 359 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 416
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 417 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 476
Query: 516 GKHQLL 521
+ +L
Sbjct: 477 FNYHIL 482
>gi|82704800|ref|XP_726704.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482224|gb|EAA18269.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 954
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 255 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 314
+C+ + V GG VLIP+ +G +L + + E + PIY + E Y
Sbjct: 292 LCNLVNECVHKGGKVLIPVFAIGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYYK 351
Query: 315 TIPEWLCKQRQEKLFSGDPLFAHVK-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 373
W+ S + + VK L I F + +N P ++F+
Sbjct: 352 IYSSWI---------SNNCVSTEVKNLFDFSNISQFSNNY-----LNENRPMVLFATPGM 397
Query: 374 LRLGPTIHLLRRWSGDHNSLLVL----------ENEVDAELAVL----PFKPISMKVLQC 419
L G + + W+ + N+L++L + E +L + ++ K++
Sbjct: 398 LHTGLALKAFKAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGNTYVYVNCKIIYL 457
Query: 420 SFLSGKKLQKVQPLLKILQPKLVLF 444
SF + +Q L+K + PK V+F
Sbjct: 458 SFSAHADSNGIQQLIKHVMPKNVIF 482
>gi|296109857|ref|YP_003616806.1| KH-domain/beta-lactamase-domain protein [methanocaldococcus
infernus ME]
gi|295434671|gb|ADG13842.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus
infernus ME]
Length = 631
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 237 NSLSNYDESV-EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 295
++ YD+ + + E + I+ ++ GG +LIP+ VG +L+ +
Sbjct: 373 STYGGYDDVLPDRAEAEKELLRIVIEHIEKGGKILIPVFGVGRAQELMLVLEEGYNQGIF 432
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS-GDPLFAHVKLIKEKKIHVFPAVHS 354
P+Y+ + E +T PE+L K + K+F GD F VF V +
Sbjct: 433 NAPVYLDGMIWEATAIHT-AYPEYLSKDMRRKIFQEGDNPFLS---------DVFQRVRN 482
Query: 355 P---KLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ +++ EPC++ + L GP++ + + D + ++
Sbjct: 483 TNDRRRIIDDSEPCVILATSGMLTGGPSLEYFKNLAPDEKNAIIF 527
>gi|296109715|ref|YP_003616664.1| RNA-metabolising metallo-beta-lactamase [methanocaldococcus
infernus ME]
gi|295434529|gb|ADG13700.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus
infernus ME]
Length = 419
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE---LLAYTNTIP 317
++++ GG V+IP+ VG ++L + ++ L+ I+ S+ L+YT
Sbjct: 202 ETIERGGKVIIPVFAVGRAQEILLVLNNYIRSGELEAKIFTDGSLIHATSIYLSYT---- 257
Query: 318 EWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
+WL + + + +G F +V+ E +I EPC++ S ++ G
Sbjct: 258 DWLNPKLKNLIETGINPFGNVEKADESRI------------FKKDEPCVIVSTSGMVQGG 305
Query: 378 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 424
P + LR N L++ + + L + PFK PI +V++ F + G
Sbjct: 306 PVLKYLRLLKDPKNKLILTGYQAEGTLGRALEEGIKEIKPFKNKIPIRGEVVKIEFSAHG 365
Query: 425 KKLQKVQPLLKILQPK--LVLFPEEWRT 450
V+ + KI +P+ +V+ E +++
Sbjct: 366 DYNSLVRYIKKIPKPEKAIVMHGERYQS 393
>gi|240975718|ref|XP_002402161.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215491113|gb|EEC00754.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 694
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 161/412 (39%), Gaps = 67/412 (16%)
Query: 136 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF 195
+ K++T+ F EE NGI +++G +GA ++I A + Y DF
Sbjct: 145 MEKIETINFHEEKEVNGIRFW-CYNAGHVLGAAMFMIEIAGVKVLYTG----------DF 193
Query: 196 DYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFI 255
+ Q ++ +++ ++ I +S++ ++ E EE E A
Sbjct: 194 ---SRQEDRHLMAAEIPNIHPDVLIIESTYG-------------THIHEKREERE--ARF 235
Query: 256 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLAYT 313
D V GG LIP+ +G +LL + + IPIY SS+A++ +A
Sbjct: 236 TGLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVY 295
Query: 314 NTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHW 372
T + ++ + ++ +P +F H+ + K I F V PC+V +
Sbjct: 296 QTYVNAMNERIRRQITINNPFVFKHISNL--KSIEHFEDV----------GPCVVMASPG 343
Query: 373 SLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-------------PISMKVLQ 418
++ G + L W D N +++ V+ LA P+ M V
Sbjct: 344 MMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTILSEPEEISTMVGQKLPLKMSVDY 403
Query: 419 CSFLSGKKLQKVQPLLKILQ-PKLVLFPEEWRTHVSFSDVTSFSVSHYSEN-ET---IHI 473
SF + Q+ ++ L+ P +VL E + + V Y ++ ET +H
Sbjct: 404 ISFSAHTDYQQTSEFIRTLKPPHIVLVHGEQN---EMGRLKAAIVREYEDDVETRIEVHN 460
Query: 474 PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VNHGKHQLLPEN 524
P ++ EL + +K + Q +L G L N H LLP +
Sbjct: 461 PRNTQAVELYFRGEKTAKVMGSLAVQAPEPGRQLSGVLVKRNFSYHLLLPAD 512
>gi|427779921|gb|JAA55412.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Rhipicephalus pulchellus]
Length = 737
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 163/420 (38%), Gaps = 66/420 (15%)
Query: 130 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 189
A ++ + K++T+ F EE NGI +++G +GA ++I A + Y
Sbjct: 182 ADLESSMEKIETINFHEEKDVNGIRFW-CYNAGHVLGAAMFMIEIAGVKVLYTG------ 234
Query: 190 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 249
DF Q ++ +++ ++ I +S++ ++ E EE
Sbjct: 235 ----DFSR---QEDRHLMAAEIPNIHPDVLIIESTYG-------------THIHEKREER 274
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 307
E A D V GG LIP+ +G +LL + + IPIY SS+A+
Sbjct: 275 E--ARFTGLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAK 332
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 366
+ +A T + ++ + ++ +P +F H+ + K I F + PC+
Sbjct: 333 KCMAVYQTYVNAMNERIRRQITINNPFVFKHISNL--KSIEHFEDIG----------PCV 380
Query: 367 VFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-------------PI 412
V + ++ G + L W D N +++ V+ LA P+
Sbjct: 381 VMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTILSEPEEISTMVGQKLPL 440
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQ-PKLVLFPEEWRTHVSFSDVTSFSVSHYSEN-ET 470
M V SF + Q+ ++ L+ P +VL E + + V Y ++ ET
Sbjct: 441 KMSVDYISFSAHTDYQQTSEFIRTLKPPHIVLVHGEQN---EMGRLKAAIVREYEDDLET 497
Query: 471 ---IHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG 527
+H P ++ EL + +K + Q +L G L + + LL + G
Sbjct: 498 RIEVHNPRNTQAVELHFRGEKTAKVMGSLAVQPPEPGRQLSGVLVKRNFSYHLLAPTDLG 557
>gi|297619493|ref|YP_003707598.1| beta-lactamase domain-containing protein [Methanococcus voltae A3]
gi|297378470|gb|ADI36625.1| beta-lactamase domain protein [Methanococcus voltae A3]
Length = 422
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 319
++++ G V+IP+ VG +++ I ++ LK +P+Y+ S+ Y + EW
Sbjct: 204 ETIEENGKVIIPVFAVGRAQEIIVIINNYIRSGLLKKVPVYVCGSLTHTTGMYM-SYSEW 262
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
L + + +G F ++ + + + N EPCI+ S ++ GP
Sbjct: 263 LNPKINNLMNNGTNPFGNL-------------LKADDNIFNNNEPCIIISTSGMVQGGPV 309
Query: 380 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPF-KPISM--KVLQCSFLS-GKK 426
+ L N L++ + + + + PF KPI + K+ + F + G
Sbjct: 310 LQYLSLLKNPKNKLILTGYQGEGTIGRSLEEGATEITPFKKPIQIKGKITKIEFSAHGDY 369
Query: 427 LQKVQPLLKILQPK--LVLFPEEWR 449
V+ L KI +PK +V+ E ++
Sbjct: 370 NSLVRYLKKIPEPKKAIVMHGERYQ 394
>gi|389852761|ref|YP_006354995.1| mRNA 3'-end processing factor [Pyrococcus sp. ST04]
gi|388250067|gb|AFK22920.1| putative mRNA 3'-end processing factor [Pyrococcus sp. ST04]
Length = 651
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++K GG VLIP VG +++ + + + PIY+ + E +T PE+L
Sbjct: 419 TIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDAPIYLDGMIWEATAIHT-AYPEYLS 477
Query: 322 KQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
++ +E++F +P + + H + +++ +EP I+ + L GP+
Sbjct: 478 RRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSKEPAIIIASSGMLVGGPS 530
Query: 380 IHLLRRWSGDHNSLLVL 396
+ ++ + D + ++
Sbjct: 531 VEYFKQLAPDPKNAIIF 547
>gi|327261273|ref|XP_003215455.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Anolis carolinensis]
Length = 651
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 171 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 230
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
+IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 231 EIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 277
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 278 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 337
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 338 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 395
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 396 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRVSGILVKRN 455
Query: 516 GKHQLL 521
+ +L
Sbjct: 456 FNYHIL 461
>gi|156936804|ref|YP_001434600.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis
KIN4/I]
gi|156565788|gb|ABU81193.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I]
Length = 652
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK------IPIYIISSVAEELLAYTNT 315
+++ GG VLIP+ VG ++L + ++ +K +PIY+ + E A
Sbjct: 402 TIEKGGFVLIPVLAVGRAQEILLLLVDAVQNKLIKSPEGGAVPIYL-DGMVYEATAIHAA 460
Query: 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 375
PEWL K +E++ G+ F + K + + + + ++L + EP ++ + L
Sbjct: 461 YPEWLAKSVKERIIKGENPFLADFVHKVESVSIEGGISREEVLES--EPGVILATSGMLT 518
Query: 376 LGPTIHLLRRWSGDHNSLLVL 396
GP++ R+ + D + +V
Sbjct: 519 GGPSLEYFRKLAPDPKNSIVF 539
>gi|449498153|ref|XP_002196255.2| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3 [Taeniopygia guttata]
Length = 746
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 267 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 326
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 327 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 373
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 374 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 433
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 434 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 491
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 492 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 551
Query: 516 GKHQLL 521
+ +L
Sbjct: 552 FNYHIL 557
>gi|268323698|emb|CBH37286.1| conserved hypothetical protein, RNA-metabolising
metallo-beta-lactamase family [uncultured archaeon]
Length = 628
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++K GG V+IP VG +++ I +E L++P+Y+ + E A + PE+L
Sbjct: 402 TLKQGGKVIIPAFAVG----RSQEVMIALEGMQLEVPVYL-DGMIWEATAIHSAYPEYLN 456
Query: 322 KQRQEKLFSG-DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
K + ++ G +P + + + V A + ++ E I+ S L GP +
Sbjct: 457 KNLKNSIYQGANPFLSDIF------VQVDDA-EKRREIIEGDESSIILSTSGMLNGGPVL 509
Query: 381 HLLRRWSGDHNSLLVL 396
L+ +GD + L+
Sbjct: 510 EYLKGLAGDERNTLIF 525
>gi|305662491|ref|YP_003858779.1| KH-domain/beta-lactamase-domain-containing protein [Ignisphaera
aggregans DSM 17230]
gi|304377060|gb|ADM26899.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM
17230]
Length = 641
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
++ GG VLIP VG +++ +A M+ + L KIP+Y I + E+ A P+
Sbjct: 401 ETYDRGGKVLIPSLSVGRAQEVMLILADAMKQNKLPKIPVY-IEGMIHEVTAIHTAYPDL 459
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL-LMNWQEPCIVFSPHWSLRLGP 378
L K+ ++L SG+ F + I+ + P+ ++ EP I+ + L GP
Sbjct: 460 LSKELGQRLKSGENPFDYETFIRLEG-------REPRTEIVESSEPAIIIATSGMLTGGP 512
Query: 379 TIHLLRRWSGDHN-SLLVLENEVDAELA 405
+ + + + N SL+ + +V+ L
Sbjct: 513 AVEYFKLMASNPNHSLVFVSYQVEGTLG 540
>gi|402466980|gb|EJW02370.1| hypothetical protein EDEG_03201 [Edhazardia aedis USNM 41457]
Length = 591
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 260 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 319
+D +K ++IPI+ V +FL+++ I + KIPI I S + +L N EW
Sbjct: 171 VDILKTDSIIIIPIDFVTLFLEVIFHIFYVLGKKEDKIPITICSPIFNKLSKIVNIQSEW 230
Query: 320 LCKQRQEKLFSG 331
LC +LFSG
Sbjct: 231 LC-----ELFSG 237
>gi|449283675|gb|EMC90280.1| Cleavage and polyadenylation specificity factor subunit 3, partial
[Columba livia]
Length = 667
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 188 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 247
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ ++ T + + ++++ +P VF + +
Sbjct: 248 DIPIYYASSLAKKCMSVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 294
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P IV + ++ G + L W D N +++ V+ LA
Sbjct: 295 KSMDHFDDIGPSIVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHVMSEP 354
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 355 EEITTMSGQKLPMKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 412
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 413 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 472
Query: 516 GKHQLL 521
+ +L
Sbjct: 473 FNYHIL 478
>gi|297737628|emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 50/272 (18%)
Query: 234 ELMNSLSNYDESVE------EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIA 287
+L+ + S Y +V E E L + C D GG VLIP +G +L +
Sbjct: 252 DLLITESTYATTVRDSKYAREREFLKAVHKCVAD----GGKVLIPTFALGRAQELCILLD 307
Query: 288 IFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 347
+ E +LK+PIY + + + Y + W QR ++ ++ F K +
Sbjct: 308 NYWERMNLKVPIYFSAGLTIQANMYYKMLISWT-NQRVKETYATHNAFDF------KNVR 360
Query: 348 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--------- 398
F + L+N PC++F+ + G ++ + + W+ +L+ L
Sbjct: 361 SF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGH 415
Query: 399 ----------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---- 444
++D ++ + + ++ Q SF + + L+K L PK V+
Sbjct: 416 KLTTGKPTKIDLDKDIQI----SVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGE 471
Query: 445 -PEEWRTHVSFSDVTSFSVSHYSENETIHIPS 475
P+ + + N+T+ IPS
Sbjct: 472 KPKMASLKGKIESDLGIQCYYPANNDTVCIPS 503
>gi|429243009|ref|NP_594263.2| mRNA cleavage and polyadenylation specificity factor complex
endoribonuclease subunit Ysh1 [Schizosaccharomyces pombe
972h-]
gi|384872669|sp|O13794.2|YSH1_SCHPO RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA
3'-end-processing protein ysh1
gi|347834169|emb|CAB16227.2| mRNA cleavage and polyadenylation specificity factor complex
endoribonuclease subunit Ysh1 [Schizosaccharomyces
pombe]
Length = 757
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 249 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL----EQIAIFMECSSLKIPIYIISS 304
+EK A + + +++ GG VL+P+ +G +LL E ++ S +PIY SS
Sbjct: 223 LEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRS--VPIYYASS 280
Query: 305 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE- 363
+A + +A T + + K+ E+ +F V S + L + +
Sbjct: 281 LARKCMAIFQTYVNMMNDNIR-------------KIFAERNPFIFRFVKSLRNLEKFDDI 327
Query: 364 -PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 421
P ++ + L+ G + LL RW+ D N+LL+ V+ +A K I+ + ++
Sbjct: 328 GPSVILASPGMLQNGVSRTLLERWAPDPRNTLLLTGYSVEGTMA----KQITNEPIEIVS 383
Query: 422 LSGKKLQK 429
LSG+K+ +
Sbjct: 384 LSGQKIPR 391
>gi|300676780|gb|ADK26656.1| cleavage and polyadenylation specific factor 3, 73kDa [Zonotrichia
albicollis]
Length = 721
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 242 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 301
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 302 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 348
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 349 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 408
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 409 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 466
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 467 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 526
Query: 516 GKHQLL 521
+ +L
Sbjct: 527 FNYHIL 532
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 50/272 (18%)
Query: 234 ELMNSLSNYDESVE------EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIA 287
+L+ + S Y +V E E L + C D GG VLIP +G +L +
Sbjct: 1446 DLLITESTYATTVRDSKYAREREFLKAVHKCVAD----GGKVLIPTFALGRAQELCILLD 1501
Query: 288 IFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 347
+ E +LK+PIY + + + Y + W QR ++ ++ F K +
Sbjct: 1502 NYWERMNLKVPIYFSAGLTIQANMYYKMLISW-TNQRVKETYATHNAFDF------KNVR 1554
Query: 348 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--------- 398
F + L+N PC++F+ + G ++ + + W+ +L+ L
Sbjct: 1555 SF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGH 1609
Query: 399 ----------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---- 444
++D ++ + + ++ Q SF + + L+K L PK V+
Sbjct: 1610 KLTTGKPTKIDLDKDIQI----SVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGE 1665
Query: 445 -PEEWRTHVSFSDVTSFSVSHYSENETIHIPS 475
P+ + + N+T+ IPS
Sbjct: 1666 KPKMASLKGKIESDLGIQCYYPANNDTVCIPS 1697
>gi|355565449|gb|EHH21878.1| hypothetical protein EGK_05038 [Macaca mulatta]
Length = 650
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 202 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 261
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 262 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 308
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 309 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 368
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 369 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 426
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 427 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 486
Query: 516 GKHQLL 521
+ +L
Sbjct: 487 FNYHIL 492
>gi|389583415|dbj|GAB66150.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium cynomolgi strain B]
Length = 713
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 82/380 (21%)
Query: 131 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 190
H+ CI KV L+ E G + I + +G +GAC + I ++ Y
Sbjct: 202 HIYSCIGKVVGLQI-NETFEMGNMSITPYYAGHVLGACIFKIEVNNFSVIYTG------- 253
Query: 191 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 250
DY + L + + SL I +S+++ Y +
Sbjct: 254 -----DYNTVPDKHL-GSTKIPSLTPEIFISESTYA--------------TYVRPTRKAS 293
Query: 251 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELL 310
+L +C+ + V GG VLIP+ +G +L + + + PIY + E
Sbjct: 294 ELD-LCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWRKMKINYPIYFGCGLTENAN 352
Query: 311 AYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 366
Y W+ C +K LF FA++ P V++ + P +
Sbjct: 353 KYYRIYSSWVNSSCVSTDKKNLFD----FANIS----------PFVNN---YLGENRPMV 395
Query: 367 VFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAELAV---------LPFKPI 412
+F+ L G ++ + W+G +L+VL + V +L + + I
Sbjct: 396 LFATPGMLHTGLSLKAFKAWAGSSKNLIVLPGYCVQGTVGHKLIMGERKISFDGNSYMNI 455
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFP-------EEWRTHVSFSDVTSFSVSHY 465
+ K++ SF + +Q L++ + P+ VLF E+ H+S SHY
Sbjct: 456 ACKIIYLSFSAHADSNGIQQLIRHVLPQNVLFVHGEKNGMEKLSKHIS---------SHY 506
Query: 466 SENETIHIPSLKESAELEIA 485
N PSL + E +
Sbjct: 507 LINSL--CPSLGQHCEFNFS 524
>gi|414881945|tpg|DAA59076.1| TPA: hypothetical protein ZEAMMB73_548570 [Zea mays]
Length = 309
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 101 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 155
+ + +L + V V L++ + N ++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 212
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 188
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 189 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLLP 235
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 236 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|212223311|ref|YP_002306547.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus onnurineus NA1]
gi|212008268|gb|ACJ15650.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus onnurineus NA1]
Length = 648
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
EE EK + +++ G VLIP VG +++ + + +++PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTIRRKGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPIYLDGMIW 460
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHSPKLLMN 360
E +T PE+L + +E++F +P+F V +E++ +++
Sbjct: 461 EATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKPVANSRERQD-----------IID 508
Query: 361 WQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 SGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSMIFVSYQAEGTLG 554
>gi|448122146|ref|XP_004204382.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
gi|358349921|emb|CCE73200.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
Length = 948
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++ GG+VL+P + G FL+LL + ++ S IP+Y +S +L Y + + EW+
Sbjct: 233 TLANGGTVLLPTSLAGRFLELLHLVDQHLQ--SAPIPVYFLSYSGTRVLNYASNLLEWMS 290
Query: 322 KQ 323
Q
Sbjct: 291 GQ 292
>gi|297545551|ref|YP_003677853.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843326|gb|ADH61842.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 829
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 41/276 (14%)
Query: 131 HVKDCISKV--QTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 188
HVKD + +V T + + + + + +G +GA + I+ A+G+I F
Sbjct: 115 HVKDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSI-------FY 167
Query: 189 SGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 247
SG F I+G+ + L D++ +ST + D + EL E
Sbjct: 168 SGDFSGFRQNTIEGAFIPKLRPDVAIFEST-------YGDKLHANREL--------EETR 212
Query: 248 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 307
+EK++ I + GG V+IP +G +++ + + LK +Y+ V E
Sbjct: 213 LIEKVSSI-------INEGGKVIIPAFALGRAQEIILILKKAINKGLLKTKVYVDGMVRE 265
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
Y P +L + +K+F G+ +F +I+ +K + + +E C++
Sbjct: 266 VCRVYKLN-PNYLRQNLAKKIFKGNDIFFDDNVIEVEKPEMREEI--------IKESCVI 316
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 403
S + GP+ + + + D +L+ + D E
Sbjct: 317 LSSSGMITGGPSQWYVEKLAQDEKNLIAITGYQDEE 352
>gi|289579410|ref|YP_003478037.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
italicus Ab9]
gi|289529123|gb|ADD03475.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
italicus Ab9]
Length = 829
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 41/276 (14%)
Query: 131 HVKDCISKV--QTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 188
HVKD + +V T + + + + + +G +GA + I+ A+G+I F
Sbjct: 115 HVKDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSI-------FY 167
Query: 189 SGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 247
SG F I+G+ + L D++ +ST + D + EL E
Sbjct: 168 SGDFSGFRQNTIEGAFIPKLRPDVAIFEST-------YGDKLHANREL--------EETR 212
Query: 248 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 307
+EK++ I + GG V+IP +G +++ + + LK +Y+ V E
Sbjct: 213 LIEKVSSI-------INEGGKVIIPAFALGRAQEIILILKKAINKGLLKTKVYVDGMVRE 265
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
Y P +L + +K+F G+ +F +I+ +K + + +E C++
Sbjct: 266 VCRVYKLN-PNYLRQNLAKKIFKGNDIFFDDNVIEVEKPEMREEI--------IKESCVI 316
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 403
S + GP+ + + + D +L+ + D E
Sbjct: 317 LSSSGMITGGPSQWYVEKLAQDEKNLIAITGYQDEE 352
>gi|448124505|ref|XP_004204939.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
gi|358249572|emb|CCE72638.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
Length = 948
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 262 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 321
++ GG+VL+P + G FL+LL + ++ S IP+Y +S +L Y + + EW+
Sbjct: 233 TLANGGTVLLPTSLAGRFLELLHLVDQHLQ--SAPIPVYFLSYSGTRVLNYASNLLEWMS 290
Query: 322 KQ 323
Q
Sbjct: 291 GQ 292
>gi|429963288|gb|ELA42832.1| hypothetical protein VICG_00147 [Vittaforma corneae ATCC 50505]
Length = 513
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 108/304 (35%), Gaps = 43/304 (14%)
Query: 94 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI 153
GP +M + +LP L +K C+ K+ + E +
Sbjct: 85 GPIYMTYPTKAVLPILLEDCQKILSMKSHDSNIYSFEDIKKCMEKIVPINMNETVEVSKG 144
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
I A+ +G IGA + + ++ Y + + + + DL++
Sbjct: 145 FTITAYYAGHVIGAAMFYVKVGDQSVVYTGDYSTTADQHLGTAWIDTLRPDLMI------ 198
Query: 214 LDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 273
TE S D +E E L I +C ++ GG LIPI
Sbjct: 199 ---TESTYGSVIRDC---------------RKAKEREFLQSIHNC----IERGGKTLIPI 236
Query: 274 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 333
+G ++ + + E L+IP+Y + E+ + + +EK+ +
Sbjct: 237 FALGRAQEICLIVESYWERMGLEIPVYFAGGMTEKANEIYKRFINYTNESVREKILEKNV 296
Query: 334 L-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS 392
F+H+K P +L Q PC++FS L G ++ + + D +
Sbjct: 297 FEFSHIK----------PYRKGSEL----QGPCVIFSSPGMLHSGTSLRIFKNICSDPRN 342
Query: 393 LLVL 396
L++L
Sbjct: 343 LVIL 346
>gi|348558392|ref|XP_003465002.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Cavia porcellus]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 402
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 403 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|417412420|gb|JAA52597.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit, partial [Desmodus rotundus]
Length = 714
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 235 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 294
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 295 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 341
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 342 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 401
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 402 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 459
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 460 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRVSGILVKRN 519
Query: 516 GKHQLL 521
+ +L
Sbjct: 520 FNYHIL 525
>gi|297619164|ref|YP_003707269.1| KH-domain/beta-lactamase-domain-containing protein [Methanococcus
voltae A3]
gi|297378141|gb|ADI36296.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3]
Length = 635
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 237 NSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK 296
+ L DE+ +E+ K+ +++ GG V++P+ +G +L+ +
Sbjct: 384 DVLPERDETEKELLKVIS------ETIAKGGKVILPVFGIGRAQELMLVLEEGYNQGIFN 437
Query: 297 IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF-SGD-PLFAHV-KLIKEKKIHVFPAVH 353
P+++ + E +T PE+L K + ++F GD P + V K +K+ K
Sbjct: 438 APVFLDGMIWEATAIHT-AYPEYLSKNMRNRIFHEGDNPFLSEVFKKVKDTK-------- 488
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ ++ EPCI+ + L GP++ + + D + +V
Sbjct: 489 DRRNVIGRDEPCIILATSGMLTGGPSVEYFKTLADDEKNAIVF 531
>gi|432100623|gb|ELK29151.1| Cleavage and polyadenylation specificity factor subunit 3 [Myotis
davidii]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADRKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|242398880|ref|YP_002994304.1| Cleavage and polyadenylation specficity factor subunit like protein
[Thermococcus sibiricus MM 739]
gi|242265273|gb|ACS89955.1| Cleavage and polyadenylation specficity factor subunit like protein
[Thermococcus sibiricus MM 739]
Length = 648
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 241 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 300
+Y EE EK + + ++K G VLIP VG +++ + + ++PIY
Sbjct: 397 DYQMPREEAEKK--LIETIMHTIKRKGKVLIPAMAVGRSQEIMIALEDYARVGGFEVPIY 454
Query: 301 IISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHS 354
+ + E +T PE+L K + ++F + +F V E+K
Sbjct: 455 LDGMIWEATAIHT-AYPEYLSKNLRNQIFHEGYNPFLNEIFKPVANANERKD-------- 505
Query: 355 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
++ +EP I+ + L GP++ + + D NSL+ + + + L
Sbjct: 506 ---IIESEEPAIIIASSGMLVGGPSVEYFKHLAPDPRNSLVFVSYQAEGTLG 554
>gi|150400309|ref|YP_001324076.1| beta-lactamase domain-containing protein [Methanococcus vannielii
SB]
gi|150013012|gb|ABR55464.1| beta-lactamase domain protein [Methanococcus vannielii SB]
Length = 635
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 237 NSLSNYDESVEEMEKL-AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 295
++ YD+ + E ++ + +++ GG V+IP+ +G +L+ +
Sbjct: 377 STYGGYDDVLPERDETEKEFLNVMLETTSRGGKVIIPVFGIGRAQELMLVLEEGYNQGIF 436
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHS 354
P+Y+ + E +T PE+L K + ++F GD F K K +
Sbjct: 437 NAPVYLDGMIWEATAIHT-AYPEYLSKAMRNRIFHEGDNPFLSEVFKKVKN------TND 489
Query: 355 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 396
+ +M+ E CI+ + L GP++ + + D + +V
Sbjct: 490 RRNIMDGDEACIILTTSGMLSGGPSVEYFKNLAEDEKNAIVF 531
>gi|359321645|ref|XP_003639652.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Canis lupus familiaris]
Length = 717
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 238 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 297
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 298 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 344
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 345 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 404
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 405 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 462
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 463 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 522
Query: 516 GKHQLL 521
+ +L
Sbjct: 523 FNYHIL 528
>gi|431911821|gb|ELK13965.1| Cleavage and polyadenylation specificity factor subunit 3, partial
[Pteropus alecto]
Length = 667
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 188 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 247
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 248 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 294
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 295 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 354
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 355 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 412
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 413 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 472
Query: 516 GKHQLL 521
+ +L
Sbjct: 473 FNYHIL 478
>gi|84489102|ref|YP_447334.1| exonuclease [Methanosphaera stadtmanae DSM 3091]
gi|84372421|gb|ABC56691.1| predicted exonuclease [Methanosphaera stadtmanae DSM 3091]
Length = 635
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
D+++ GG +LIP+ VG +++ + F+ L K+P+Y+ + E +T PE+
Sbjct: 402 DTIQKGGKILIPVFAVGRAQEIMIVLEEFINRGILGKVPVYLDGMIWEATAIHT-AHPEF 460
Query: 320 LCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAV---HSPKLLMNWQEPCIVFSPHWSLR 375
L + Q+++F +G+ F VF V + L+ EPC++ S L
Sbjct: 461 LSNELQKQIFHAGENPFTS---------DVFNKVTNNEQRRKLLESNEPCVILSTSGMLT 511
Query: 376 LGPTIHLLRRWSGDHNSLLVL 396
G ++ + D + ++
Sbjct: 512 GGNSVEYFKELCEDEKNRIIF 532
>gi|89267474|emb|CAJ83498.1| cleavage and polyadenylation specific factor 3 [Xenopus (Silurana)
tropicalis]
Length = 692
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 38/298 (12%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 307
E+ A C+ D V GG LIP+ +G +LL + + + IPIY SS+A+
Sbjct: 224 EREARFCNTVHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAK 283
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ +A T + + ++++ +P VF + + K + ++ + P
Sbjct: 284 KCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNLKSMDHFDDIGPS 330
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA-----------ELAVLPFK--P 411
+V + ++ G + L W D N +++ V+ E+A + + P
Sbjct: 331 VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLP 390
Query: 412 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENE-- 469
+ M V SF + Q+ ++ L+P V+ + + + + + + Y +N+
Sbjct: 391 LKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKAALIREYEDNDEV 448
Query: 470 --TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VNHGKHQLLPEN 524
+H P E+ L + +K + +K R+ G L N H L P +
Sbjct: 449 EIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRISGILVKRNFNYHILCPSD 506
>gi|55741994|ref|NP_001006770.1| cleavage and polyadenylation specificity factor 3 [Xenopus
(Silurana) tropicalis]
gi|49522504|gb|AAH75564.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus
(Silurana) tropicalis]
Length = 692
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 38/298 (12%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 307
E+ A C+ D V GG LIP+ +G +LL + + + IPIY SS+A+
Sbjct: 224 EREARFCNTVHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAK 283
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ +A T + + ++++ +P VF + + K + ++ + P
Sbjct: 284 KCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNLKSMDHFDDIGPS 330
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA-----------ELAVLPFK--P 411
+V + ++ G + L W D N +++ V+ E+A + + P
Sbjct: 331 VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLP 390
Query: 412 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENE-- 469
+ M V SF + Q+ ++ L+P V+ + + + + + + Y +N+
Sbjct: 391 LKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKAALIREYEDNDEV 448
Query: 470 --TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VNHGKHQLLPEN 524
+H P E+ L + +K + +K R+ G L N H L P +
Sbjct: 449 EIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRISGILVKRNFNYHILCPSD 506
>gi|194220982|ref|XP_001502516.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Equus caballus]
gi|301775721|ref|XP_002923277.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Ailuropoda melanoleuca]
Length = 684
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|402890043|ref|XP_003908303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Papio anubis]
Length = 684
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|226492345|ref|NP_001151557.1| LOC100285191 [Zea mays]
gi|195647682|gb|ACG43309.1| cleavage and polyadenylation specificity factor, 100 kDa subunit
[Zea mays]
Length = 673
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 2 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 42
Query: 101 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 155
+ + +L + V V L++ + N ++
Sbjct: 43 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 81
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 212
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 82 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 124
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 125 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIDSL-IKVLATGGSVLLP 171
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 172 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 222
>gi|296224527|ref|XP_002758090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Callithrix jacchus]
Length = 684
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|332247248|ref|XP_003272765.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Nomascus leucogenys]
gi|67969340|dbj|BAE01022.1| unnamed protein product [Macaca fascicularis]
gi|355751093|gb|EHH55348.1| hypothetical protein EGM_04543 [Macaca fascicularis]
gi|380813676|gb|AFE78712.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
gi|383419123|gb|AFH32775.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
gi|384940728|gb|AFI33969.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
Length = 684
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|281351872|gb|EFB27456.1| hypothetical protein PANDA_012399 [Ailuropoda melanoleuca]
Length = 648
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 169 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 228
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 229 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 275
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 276 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 335
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 336 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 393
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 394 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 453
Query: 516 GKHQLL 521
+ +L
Sbjct: 454 FNYHIL 459
>gi|224121102|ref|XP_002330904.1| predicted protein [Populus trichocarpa]
gi|222872726|gb|EEF09857.1| predicted protein [Populus trichocarpa]
Length = 740
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 260 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 319
+ +++ GG+VL+P++ G L+LL + F L PI+ +S V+ + Y + EW
Sbjct: 223 LKTLEGGGNVLLPVDSAGRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEW 282
Query: 320 LCKQRQEKL-FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
+ + S D F L+K HV + +L P +V + SL G
Sbjct: 283 MSDSIAKSFETSRDNAF----LMK----HVTLLISKDELDNASTGPKVVLASVASLEAGF 334
Query: 379 TIHLLRRWSGDHNSLLVL 396
+ + W+ D +L++
Sbjct: 335 SHDIFAEWAADVKNLVLF 352
>gi|350539083|ref|NP_001233296.1| cleavage and polyadenylation specificity factor subunit 3 [Pan
troglodytes]
gi|397513374|ref|XP_003826991.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Pan paniscus]
gi|426334660|ref|XP_004028859.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Gorilla gorilla gorilla]
gi|343961085|dbj|BAK62132.1| cleavage and polyadenylation specificity factor 73 kDa subunit [Pan
troglodytes]
gi|343961781|dbj|BAK62478.1| cleavage and polyadenylation specificity factor 73 kDa subunit [Pan
troglodytes]
gi|410254182|gb|JAA15058.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
gi|410291448|gb|JAA24324.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
gi|410339611|gb|JAA38752.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
Length = 684
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|27805863|ref|NP_776709.1| cleavage and polyadenylation specificity factor subunit 3 [Bos
taurus]
gi|426223116|ref|XP_004005724.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Ovis aries]
gi|18202362|sp|P79101.1|CPSF3_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; AltName: Full=mRNA 3'-end-processing
endonuclease CPSF-73
gi|1707412|emb|CAA65151.1| Cleavage and Polyadenylation Specifity Factor protein [Bos taurus]
gi|75773721|gb|AAI04554.1| Cleavage and polyadenylation specific factor 3, 73kDa [Bos taurus]
gi|296482248|tpg|DAA24363.1| TPA: cleavage and polyadenylation specificity factor subunit 3 [Bos
taurus]
gi|440897562|gb|ELR49218.1| Cleavage and polyadenylation specificity factor subunit 3 [Bos
grunniens mutus]
Length = 684
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|351704796|gb|EHB07715.1| Cleavage and polyadenylation specificity factor subunit 3
[Heterocephalus glaber]
Length = 692
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVHAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 402
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 403 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|15079675|gb|AAH11654.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo
sapiens]
gi|157929136|gb|ABW03853.1| cleavage and polyadenylation specific factor 3, 73kDa [synthetic
construct]
Length = 684
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|395507218|ref|XP_003757924.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Sarcophilus harrisii]
Length = 684
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|291412514|ref|XP_002722528.1| PREDICTED: cleavage and polyadenylation specific factor 3, 73kDa
[Oryctolagus cuniculus]
Length = 684
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|74221128|dbj|BAE42066.1| unnamed protein product [Mus musculus]
Length = 684
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEKN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|335285899|ref|XP_003354974.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Sus scrofa]
Length = 684
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|315231930|ref|YP_004072366.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
gi|315184958|gb|ADT85143.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
Length = 648
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 240 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 299
++Y E+ EK + ++K G VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREDAEKK--LIEVIHQTIKRKGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 300 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 353
Y+ + E +T PE+L K ++++F + +F V KE++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKHLRDQIFHEGYNPFLNEIFKPVANSKERQD------- 505
Query: 354 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+++ +EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSEEPAIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 554
>gi|7706427|ref|NP_057291.1| cleavage and polyadenylation specificity factor subunit 3 [Homo
sapiens]
gi|18203503|sp|Q9UKF6.1|CPSF3_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; AltName: Full=mRNA 3'-end-processing
endonuclease CPSF-73
gi|6002955|gb|AAF00224.1|AF171877_1 cleavage and polyadenylation specificity factor 73 kDa subunit
[Homo sapiens]
gi|18044212|gb|AAH20211.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo
sapiens]
gi|62822309|gb|AAY14858.1| unknown [Homo sapiens]
gi|119621394|gb|EAX00989.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform
CRA_a [Homo sapiens]
Length = 684
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|126303222|ref|XP_001371997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Monodelphis domestica]
Length = 684
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|336121952|ref|YP_004576727.1| KH-domain/beta-lactamase-domain-containing protein
[Methanothermococcus okinawensis IH1]
gi|334856473|gb|AEH06949.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus
okinawensis IH1]
Length = 635
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+++K G V+IP+ +G +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETIKRKGKVIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 321 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
K + ++F GD F K K ++ + +++ EPCI+ + L GP+
Sbjct: 461 SKNIRNRIFHEGDNPFLSEVFRKVKN------TNNRRNIIDSNEPCIILTTSGMLSGGPS 514
Query: 380 IHLLRRWSGDHNSLLVL 396
+ + + D + +V
Sbjct: 515 VEYFKSLAEDEKNAIVF 531
>gi|62898706|dbj|BAD97207.1| cleavage and polyadenylation specific factor 3, 73kDa variant [Homo
sapiens]
Length = 684
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|150400487|ref|YP_001324253.1| beta-lactamase domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150013190|gb|ABR55641.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3]
Length = 635
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+++K G ++IP+ +G +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETIKRKGKIIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 321 CKQRQEKLF-SGD-PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
K + ++F GD P + V KK+ ++ + +++ EPCI+ + L GP
Sbjct: 461 SKNMRNRIFHEGDNPFLSEVF----KKVR---NTNNRRNIIDSDEPCIILTTSGMLSGGP 513
Query: 379 TIHLLRRWSGDHNSLLVL 396
++ + + D + +V
Sbjct: 514 SVEYFKSLAHDERNAIVF 531
>gi|344280152|ref|XP_003411849.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Loxodonta africana]
Length = 903
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 424 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 483
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 484 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 530
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 531 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 590
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 591 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 648
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 649 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 708
Query: 516 GKHQLL 521
+ +L
Sbjct: 709 FNYHIL 714
>gi|219886123|gb|ACL53436.1| unknown [Zea mays]
gi|414881946|tpg|DAA59077.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 1 [Zea mays]
gi|414881947|tpg|DAA59078.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 2 [Zea mays]
gi|414881948|tpg|DAA59079.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 3 [Zea mays]
Length = 737
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 101 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 155
+ + +L + V V L++ + N ++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 212
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 188
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 189 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLLP 235
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 236 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|342319748|gb|EGU11695.1| Endoribonuclease YSH1 [Rhodotorula glutinis ATCC 204091]
Length = 857
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 152/401 (37%), Gaps = 72/401 (17%)
Query: 27 YARKILILKTGRSPM--GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN--ME 82
Y + ++ G P GM LPFL ++ + T A I ++ C+ ME
Sbjct: 50 YKGRTIVCDAGVHPAFSGMAALPFLDELD------WSTVDAILITHFHLDHAACLTYVME 103
Query: 83 YRQFYGAEESSGPQWM----KWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISK 138
F +E +G +M K L+ +R G D + + + +
Sbjct: 104 KTNF---KEGNGVVYMSHPTKAVYRYLMSDFVRVSTAGSDDNLF-----TESEMLASFDQ 155
Query: 139 VQTLRFGEE------ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHA 192
+Q+ F +E + + + +F++G +GAC ++I A + Y
Sbjct: 156 IQSFDFEQEILLPPSSTSSASVRFTSFAAGHVLGACMFLIEVAGARVLYTG--------- 206
Query: 193 MDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWE---ELMNSLSNYDESVEE- 248
DY STE+ D+ NWE ++M S Y E
Sbjct: 207 ---DY------------------STEE-DRHLVPAKVPNWERPPDVMICESTYGVQSHEP 244
Query: 249 -MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIF-MECSSLK-IPIYIISSV 305
+EK A + +K GG VL+P+ +G +LL + + E L+ IPIY +SS+
Sbjct: 245 RLEKEAQFTNLVRSILKRGGRVLLPVFALGRAQELLLILDEYWAEHPELQHIPIYYVSSL 304
Query: 306 AEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPC 365
A + + + + K G F K K + P L N + PC
Sbjct: 305 AIKCMDVYRQYIHTMSPNVRSKFARGINPFD----FKRKDSFIRPLDRGISKL-NDRNPC 359
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 405
+V + L G + LL +W+ D N L++ V+ +A
Sbjct: 360 VVMASPGFLTSGVSRELLEKWAPDPRNGLIITGYSVEGVMA 400
>gi|414881949|tpg|DAA59080.1| TPA: hypothetical protein ZEAMMB73_548570 [Zea mays]
Length = 766
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 101 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 155
+ + +L + V V L++ + N ++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 212
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 188
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 189 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLLP 235
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 236 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|148702078|gb|EDL34025.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b
[Mus musculus]
Length = 701
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 222 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 281
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 282 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 328
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 329 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 388
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 389 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 446
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 447 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 506
Query: 516 GKHQLL 521
+ +L
Sbjct: 507 FNYHIL 512
>gi|221508463|gb|EEE34050.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1103
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 267 GSVLIPINRVGV-FLQLLEQIAIFMECSSL-------------KIPIYIISSVAEELLAY 312
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 313 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 355
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 356 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 395
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|444731702|gb|ELW72051.1| Cleavage and polyadenylation specificity factor subunit 3 [Tupaia
chinensis]
Length = 587
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 116/294 (39%), Gaps = 37/294 (12%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 307
E+ A C+ D V GG LIP+ +G +LL + + + IPIY SS+A+
Sbjct: 120 EREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAK 179
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 365
+ +A T + + ++++ +P VF + + K + ++ + P
Sbjct: 180 KCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNLKSMDHFDDIGPS 226
Query: 366 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-------------P 411
+V + ++ G + L W D N +++ V+ LA P
Sbjct: 227 VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLP 286
Query: 412 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETI 471
+ M V SF + Q+ ++ L+P V+ + + + + + Y +N+ +
Sbjct: 287 LKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKAALIREYEDNDEV 344
Query: 472 HI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL 521
HI P E+ L + +K + +K R+ G L + + +L
Sbjct: 345 HIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHIL 398
>gi|197102904|ref|NP_001127045.1| cleavage and polyadenylation specificity factor subunit 3 [Pongo
abelii]
gi|55733623|emb|CAH93488.1| hypothetical protein [Pongo abelii]
Length = 647
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 516 GKHQLL 521
+ +L
Sbjct: 453 FNYHIL 458
>gi|2394306|gb|AAB70268.1| 73 kDA subunit of cleavage and polyadenylation specificity factor
[Homo sapiens]
Length = 379
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 119/306 (38%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 86 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELX 145
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
PIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 146 DXPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 192
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 193 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 252
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 253 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 310
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 311 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 370
Query: 516 GKHQLL 521
+ +L
Sbjct: 371 FNYHIL 376
>gi|242037469|ref|XP_002466129.1| hypothetical protein SORBIDRAFT_01g001930 [Sorghum bicolor]
gi|241919983|gb|EER93127.1| hypothetical protein SORBIDRAFT_01g001930 [Sorghum bicolor]
Length = 738
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 41 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 100
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 101 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN----GIL 154
+ + +L + V V L++ + N GI+
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGIV 145
Query: 155 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDL 211
I + L +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHL-LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------ 188
Query: 212 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 271
SF + N+L+N + + + FI S I + GGSVL+
Sbjct: 189 -----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIDSL-IKVLATGGSVLL 234
Query: 272 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 323
P++ G L+LL + + + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 235 PVDTAGRVLELLLLLDTYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMRDQ 286
>gi|354504216|ref|XP_003514173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Cricetulus griseus]
Length = 684
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|335775092|gb|AEH58456.1| cleavage and polyadenylation specificity facto subunit 3-like
protein, partial [Equus caballus]
Length = 499
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 234 ELMNSLSNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME 291
+++ S S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 14 DILISESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQ 73
Query: 292 CSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVF 349
IPIY SS+A++ +A T + + ++++ +P VF
Sbjct: 74 NHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VF 120
Query: 350 PAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAV 406
+ + K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 121 KHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAK 180
Query: 407 LPFK-------------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS 453
P+ M V SF + Q+ ++ L+P V+ +
Sbjct: 181 HIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--E 238
Query: 454 FSDVTSFSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 509
+ + + + Y +N+ +HI P E+ L + +K + +K R+ G
Sbjct: 239 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 298
Query: 510 RLFVNHGKHQLL 521
L + + +L
Sbjct: 299 ILVKRNFNYHIL 310
>gi|71795627|ref|NP_001025201.1| cleavage and polyadenylation specificity factor subunit 3 [Rattus
norvegicus]
gi|71121802|gb|AAH99817.1| Cleavage and polyadenylation specificity factor 3 [Rattus
norvegicus]
Length = 685
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|119621395|gb|EAX00990.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform
CRA_b [Homo sapiens]
Length = 647
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 516 GKHQLL 521
+ +L
Sbjct: 453 FNYHIL 458
>gi|237834371|ref|XP_002366483.1| hypothetical protein TGME49_028710 [Toxoplasma gondii ME49]
gi|211964147|gb|EEA99342.1| hypothetical protein TGME49_028710 [Toxoplasma gondii ME49]
Length = 1103
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 267 GSVLIPINRVGV-FLQLLEQIAIFMECSSL-------------KIPIYIISSVAEELLAY 312
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 313 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 355
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 356 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 395
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|67969643|dbj|BAE01170.1| unnamed protein product [Macaca fascicularis]
Length = 684
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|344257704|gb|EGW13808.1| Cleavage and polyadenylation specificity factor subunit 3
[Cricetulus griseus]
Length = 647
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 516 GKHQLL 521
+ +L
Sbjct: 453 FNYHIL 458
>gi|284161558|ref|YP_003400181.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
gi|284011555|gb|ADB57508.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
Length = 631
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
+++ GG VLIP VG +++ + + + ++P+YI + E +T PE+
Sbjct: 398 ETISKGGKVLIPAFAVGRSQEVMIVLEEAIRTKKIDEVPVYIDGMIYEATAIHT-AYPEY 456
Query: 320 LCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSL 374
L ++ +F +P + F V SP + +++ EPC++ S L
Sbjct: 457 LNAHLRDLIFHQGINPFISES----------FVRVDSPSKRQEVIDSSEPCVIISTSGML 506
Query: 375 RLGPTIHLLRRWSGDHNSLLVL 396
GP + R +GD + +V
Sbjct: 507 NGGPVMEYFRALAGDEKNTIVF 528
>gi|71682600|gb|AAI00570.1| Cpsf3 protein [Mus musculus]
Length = 512
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 111/278 (39%), Gaps = 39/278 (14%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYVSFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQ 493
+ Y +N+ +HI P E+ L + +K Q
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVQ 467
>gi|149050991|gb|EDM03164.1| cleavage and polyadenylation specificity factor 3, isoform CRA_a
[Rattus norvegicus]
Length = 685
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|221486709|gb|EEE24970.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1103
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 267 GSVLIPINRVGV-FLQLLEQIAIFMECSSL-------------KIPIYIISSVAEELLAY 312
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 313 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 355
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 356 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 395
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|149050992|gb|EDM03165.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b
[Rattus norvegicus]
Length = 605
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|31980904|ref|NP_061283.2| cleavage and polyadenylation specificity factor subunit 3 [Mus
musculus]
gi|341940395|sp|Q9QXK7.2|CPSF3_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; Short=mRNA 3'-end-processing endonuclease
CPSF-73
gi|23271024|gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus]
Length = 684
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|325187176|emb|CCA21717.1| cleavage and polyadenylation specificity factor subunit putative
[Albugo laibachii Nc14]
gi|325187319|emb|CCA21858.1| cleavage and polyadenylation specificity factor subunit putative
[Albugo laibachii Nc14]
Length = 731
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 188 ASGHAMDFD-YRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESV 246
ASGH + +R ++ +D I+Y+ + S + +S S + +SLS + +
Sbjct: 151 ASGHLIGGSMWRIMKETDEIIYAVDYNHRSEHVLPKSVLSSFTRPTLLITDSLSLHTKQP 210
Query: 247 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 306
+ ++ + I + ++++GG+VL+P + G L+L+ + + + L+ PI ++ ++
Sbjct: 211 KLKDRDSKIMVEILKTLRSGGNVLLPTDSAGRVLELMRVLDQYWIQNKLRDPIALLHDMS 270
Query: 307 EELLAYTNTIPEWLCKQRQEKLFSG--DPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQE 363
+ EW +Q +G +P F+H+ LI HS + L
Sbjct: 271 YYTPKAAEAMLEWCNEQIARNFDAGRQNPFQFSHIHLI-----------HSIEELEKLSS 319
Query: 364 PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 394
P +V + +L G L +++ D NS++
Sbjct: 320 PKVVLATSATLECGYAKELFIKYAADTRNSII 351
>gi|149641381|ref|XP_001505542.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like, partial [Ornithorhynchus anatinus]
Length = 595
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 116 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 175
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 176 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 222
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 223 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 282
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 283 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 340
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 341 ALIREYEDNDDVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 400
Query: 516 GKHQLL 521
+ +L
Sbjct: 401 FNYHIL 406
>gi|312136618|ref|YP_004003955.1| kh-domain/beta-lactamase-domain-containing protein [Methanothermus
fervidus DSM 2088]
gi|311224337|gb|ADP77193.1| KH-domain/beta-lactamase-domain protein [Methanothermus fervidus
DSM 2088]
Length = 650
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 319
D++K GG VLIP+ VG +L+ + +++ L +IPI++ V E +T T PE+
Sbjct: 418 DTIKRGGKVLIPVFAVGRAQELMVVLDEYIKSGILEEIPIFVDGMVWEATAIHT-TRPEY 476
Query: 320 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNW--QEPCIVFSPHWSLRLG 377
L K +++F + + E +F V S + EPC++ S L G
Sbjct: 477 LSKTLSDQIFH----YGYNPFTSE----IFNKVSSSDERKDVVEGEPCVILSTSGMLAGG 528
Query: 378 PTIHLLRRWSGDHNSLLVL 396
++ + D + LV
Sbjct: 529 NSVEYFKWLCEDEKNTLVF 547
>gi|74178650|dbj|BAE33998.1| unnamed protein product [Mus musculus]
Length = 684
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLRA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|355680849|gb|AER96661.1| cleavage and polyadenylation specific factor 3, 73kDa [Mustela
putorius furo]
Length = 600
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 154 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 213
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 214 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 260
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 261 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 320
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 321 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVVLVHGEQN--EMARLKA 378
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 379 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 438
Query: 516 GKHQLL 521
+ +L
Sbjct: 439 FNYHIL 444
>gi|74211665|dbj|BAE29190.1| unnamed protein product [Mus musculus]
Length = 684
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYRTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 515
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 516 GKHQLL 521
+ +L
Sbjct: 490 FNYHIL 495
>gi|308509314|ref|XP_003116840.1| hypothetical protein CRE_01624 [Caenorhabditis remanei]
gi|308241754|gb|EFO85706.1| hypothetical protein CRE_01624 [Caenorhabditis remanei]
Length = 612
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 123/332 (37%), Gaps = 64/332 (19%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV E + L I+AF +G +GA + I ++ Y N
Sbjct: 130 IKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRLGDHSVLYTGDYNMTPDR 189
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 190 HL--------GAARVLPGVRPTVLISESTYATTIRDSKRARER------DFLRKVHE--- 232
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
+V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 233 ----------TVMKGGKVIIPVFALGRAQELCILLESYWERMALSVPIYFSQGLAERANQ 282
Query: 312 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 283 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDQPG------------PQVLFST 329
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 412
L G ++ + ++W GD +++++ E+D ++ I
Sbjct: 330 PGMLHGGQSLKVFKKWCGDPLNMIIMPGYCVAGTVGARVINGEKKIEIDGKM-----HDI 384
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+ V SF + + + L++ +P+ V+F
Sbjct: 385 KLGVEYMSFSAHADAKGIMQLIRQCEPQHVMF 416
>gi|156096985|ref|XP_001614526.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium vivax Sal-1]
gi|148803400|gb|EDL44799.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium vivax]
Length = 911
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 234 ELMNSLSNYDESVEEMEKLA--FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME 291
E+ S S Y V K + +C+ + V GG VLIP+ +G +L + + +
Sbjct: 274 EIFISESTYATYVRPTRKASELDLCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWK 333
Query: 292 CSSLKIPIYIISSVAEELLAYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIH 347
+ PIY + E Y W+ C +K LF FA++
Sbjct: 334 KMKINYPIYFGCGLTENANKYYRIYSSWVNSSCVSTDKKNLFD----FANIS-------- 381
Query: 348 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDA 402
P V+S + P ++F+ L G ++ + WSG +L+VL + V
Sbjct: 382 --PFVNS---YLGENRPMVLFATPGMLHTGLSLKAFKAWSGCSKNLIVLPGYCVQGTVGH 436
Query: 403 ELAVLPFK---------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+L + K ++ +++ SF + +Q L++ + P+ VLF
Sbjct: 437 KLIMGERKISFDGNTYLNVACRIIYLSFSAHADSNGIQQLIRHVLPQNVLF 487
>gi|126030713|pdb|2I7T|A Chain A, Structure Of Human Cpsf-73
gi|126030714|pdb|2I7V|A Chain A, Structure Of Human Cpsf-73
Length = 459
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI 473
+ Y +N+ +HI
Sbjct: 430 ALIREYEDNDEVHI 443
>gi|268530366|ref|XP_002630309.1| Hypothetical protein CBG00745 [Caenorhabditis briggsae]
Length = 637
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 122/332 (36%), Gaps = 64/332 (19%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV E + L I+AF +G +GA + I ++ Y N
Sbjct: 156 IKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLYTGDYNMTPDR 215
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 216 HL--------GAARVLPGVRPTILISESTYATTIRDSKRARER------DFLRKVHE--- 258
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
+V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 259 ----------TVMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQ 308
Query: 312 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 309 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDQPG------------PQVLFST 355
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 412
L G ++ + ++W D +++++ E+D ++ I
Sbjct: 356 PGMLHGGQSLKVFKKWCSDPLNMIIMPGYCVAGTVGARVINGEKRIEIDGKV-----HEI 410
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+ V SF + + + L++ +PK V+F
Sbjct: 411 KLGVEYMSFSAHADAKGIMQLIRQCEPKHVMF 442
>gi|32564696|ref|NP_495706.2| Protein F10B5.8 [Caenorhabditis elegans]
gi|26985793|emb|CAB54223.2| Protein F10B5.8 [Caenorhabditis elegans]
Length = 608
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 41/266 (15%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ KV E + L I+AF +G +GA + I ++ Y
Sbjct: 130 IKNCMKKVVGCALHEIIHVDNELSIRAFYAGHVLGAAMFEIRLGDHSVLYTG-------- 181
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
DY L L + T I +S+++ + + E +
Sbjct: 182 ----DYNMTPDRHLGAARVLPGVRPTVLISESTYATTIRD-----------SKRARERDF 226
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
L + C V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 227 LRKVHEC----VMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQ 282
Query: 312 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
Y W + ++ + F H+K + EK P P ++FS
Sbjct: 283 YYRLFISWTNENIKKTFVERNMFEFKHIKPM-EKGCEDQPG------------PQVLFST 329
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVL 396
L G ++ + ++W D +++++
Sbjct: 330 PGMLHGGQSLKVFKKWCSDPLNMIIM 355
>gi|385806123|ref|YP_005842521.1| beta-lactamase [Fervidicoccus fontis Kam940]
gi|383795986|gb|AFH43069.1| beta-lactamase domain protein [Fervidicoccus fontis Kam940]
Length = 619
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 42/217 (19%)
Query: 262 SVKAGGSVLIPINRVG----VFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIP 317
+V+ GG +L+P+ VG + L L E F + IP+YI V E +T+ P
Sbjct: 381 TVQRGGKILVPVMSVGRGQEIMLILSEA---FSKGQLQDIPVYIEGMVTEVTALHTHY-P 436
Query: 318 EWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP--CIVFSPHWSLR 375
E + + ++ + G+ F + F V S EP CI+ + L
Sbjct: 437 ELMSQSVEKAIHLGENPFMNKN---------FVVVQSKDKRSEALEPGPCIILATSGMLN 487
Query: 376 LGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLL 434
GP++ L+ + D NSL+ + +V+ L G+K++ Q L
Sbjct: 488 GGPSVEYLKSLAEDPKNSLIFVSYQVEGTL-------------------GRKIKDGQKEL 528
Query: 435 KILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETI 471
L P + E + ++ + FS H +NE I
Sbjct: 529 TFLNPDGKI--ETIKINMEIHSIEGFS-GHSDKNELI 562
>gi|341903207|gb|EGT59142.1| hypothetical protein CAEBREN_31222 [Caenorhabditis brenneri]
Length = 571
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 61/332 (18%), Positives = 121/332 (36%), Gaps = 64/332 (19%)
Query: 132 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 191
+K+C+ K E + L I+AF +G +GA + I ++ Y N
Sbjct: 133 IKNCMKKCIGCALHEVIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLYTGDYNMTPDR 192
Query: 192 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 251
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 193 HL--------GAARVLPGVRPTVLISESTYATTIRDSKRARER------DFLRKVHE--- 235
Query: 252 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 311
SV GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 236 ----------SVMKGGKVIIPVFALGRAQELCILLESYWERMALTVPIYFSQGLAERANQ 285
Query: 312 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 286 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDMPG------------PQVLFST 332
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 412
L G ++ + ++W D +++++ E+D ++ I
Sbjct: 333 PGMLHGGQSLKVFKKWCSDPINMIIMPGYCVAGTVGAKVINGEKRIEIDGKM-----HDI 387
Query: 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
+ V SF + + + L++ +P+ V+F
Sbjct: 388 RLGVEYMSFSAHADAKGIMQLIRQCEPQHVMF 419
>gi|390933363|ref|YP_006390868.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568864|gb|AFK85269.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 820
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 41/252 (16%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 212
L + +S+G GA + I G GS F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASIYIVGN-------GGSFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
+ST + D + EL E +EK+ + VK GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGSV-------VKNGGKVLIP 230
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 332
+G +++ + + + +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMINTKVYVDGMVKDICRIYKLN-PNYLRENLAKKIFKGG 289
Query: 333 PLFAHVKLIKEKKIHVFPAVHSPKLLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F +V P V P++ +EPC++ S L GP+ + +GD
Sbjct: 290 EIFFDG--------NVMP-VDMPEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEK 340
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 341 NLIAITGYQDEE 352
>gi|403270697|ref|XP_003927303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Saimiri boliviensis boliviensis]
Length = 658
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 209 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 268
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 269 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 315
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 316 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 375
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 376 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 433
Query: 460 FSVSHYSENETIHI 473
+ Y +N+ +HI
Sbjct: 434 ALIREYEDNDEVHI 447
>gi|304317834|ref|YP_003852979.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779336|gb|ADL69895.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 820
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 41/252 (16%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 212
L + +S+G GA + I G +G S F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASIYIVGNEG-------SFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 213 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 272
+ST + D + EL E +EK+ + VK GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGSV-------VKNGGKVLIP 230
Query: 273 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 332
+G +++ + + + +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMINTKVYVDGMVKDICRIYKLN-PNYLRENLAKKIFKGG 289
Query: 333 PLFAHVKLIKEKKIHVFPAVHSPKLLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 391
+F +V P V P++ +EPC++ S L GP+ + +GD
Sbjct: 290 EIFFDD--------NVMP-VDIPEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEK 340
Query: 392 SLLVLENEVDAE 403
+L+ + D E
Sbjct: 341 NLIAITGYQDEE 352
>gi|341890123|gb|EGT46058.1| hypothetical protein CAEBREN_05882 [Caenorhabditis brenneri]
Length = 618
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+SV GG V+IP+ +G +L + + E +L +PIY +AE Y W
Sbjct: 232 ESVMKGGKVIIPVFALGRAQELCILLESYWERMALTVPIYFSQGLAERANQYYRLFISWT 291
Query: 321 CKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 379
+ ++ + F H++ + EK P P ++FS L G +
Sbjct: 292 NENIKKTFVERNMFEFKHIRPM-EKGCEDMPG------------PQVLFSTPGMLHGGQS 338
Query: 380 IHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPISMKVLQCSF 421
+ + ++W D +++++ E+D ++ I + V SF
Sbjct: 339 LKVFKKWCSDPINMIIMPGYCVAGTVGAKVINGEKRIEIDGKM-----HDIRLGVEYMSF 393
Query: 422 LSGKKLQKVQPLLKILQPKLVLF 444
+ + + L++ +P+ V+F
Sbjct: 394 SAHADAKGIMQLIRQCEPQHVMF 416
>gi|449518964|ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 27/199 (13%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+ + +GG VLIP +G +L + + E +LK PIY+ + + + Y + W
Sbjct: 70 NCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWT 129
Query: 321 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 380
++ +E + + K + F + +++ PC++F+ + G ++
Sbjct: 130 SQKVKETYTTRNAF-------DFKNVQKF-----DRSMIDAPGPCVLFATPGMISSGFSL 177
Query: 381 HLLRRWSGDHNSLLVLENEVDAELA---VLPFKP------------ISMKVLQCSFLSGK 425
+ +RW+ +L+ L A ++ KP + +V Q +F
Sbjct: 178 EVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHT 237
Query: 426 KLQKVQPLLKILQPKLVLF 444
+ + L+K L PK V+
Sbjct: 238 DSKGIMDLVKFLSPKHVIL 256
>gi|213407230|ref|XP_002174386.1| cleavage factor two Cft2/polyadenylation factor CPSF-73
[Schizosaccharomyces japonicus yFS275]
gi|212002433|gb|EEB08093.1| cleavage factor two Cft2/polyadenylation factor CPSF-73
[Schizosaccharomyces japonicus yFS275]
Length = 786
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 128 CIAHVKDCISKVQTLRFGEEACY----NGILIIKAFSSGLDIGACNWIISGAKGNIAYIS 183
IA V + TLR+ + A NGI I AF++G +G W I+ ++ Y
Sbjct: 101 TIADVDLVFDSITTLRYSQPASLMGKCNGI-NITAFNAGHTLGGTLWSITKESESLVYAV 159
Query: 184 GSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 243
N H+ D + + G+ LYS+ L+ ++ D NN + + D
Sbjct: 160 DWN----HSKD---KHLNGT--ALYSNGQILEIL--TRPNTLVTDANNALISIPARKKRD 208
Query: 244 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYI 301
E++ E + ++ GGSVL+P++ ++L + S L PIY
Sbjct: 209 EALIE---------AVMSTLLKGGSVLLPMDAASRVIELCYFLDTHWASSQPPLSFPIYF 259
Query: 302 ISSVAEELLAYTNTIPEWL 320
+S + + + Y ++ EW+
Sbjct: 260 LSYSSAKTIGYAKSMIEWM 278
>gi|410955844|ref|XP_003984560.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Felis catus]
Length = 686
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 240 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 295
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 296 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 355
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 356 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 410
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 411 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 459
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 460 FSVSHYSENETIHI 473
+ Y +N+ +HI
Sbjct: 430 ALIREYEDNDEVHI 443
>gi|401827745|ref|XP_003888165.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
gi|392999365|gb|AFM99184.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
Length = 643
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME------CSSLKIPIYIIS 303
E+ S + V+ GG L+P+ +G +LL + +E S KIPIY S
Sbjct: 212 EREGRFTSIVQNVVQRGGRCLLPVFALGRAQELL----LILEEHWGSNASLQKIPIYYAS 267
Query: 304 SVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQ 362
++A+ + T + ++ Q+ +P F +VK +K I F + +
Sbjct: 268 ALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAFKYVKNLK--GIDSF----------DDE 315
Query: 363 EPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 421
PC++ + L+ G + L RW D N++++ VD LA K I + +
Sbjct: 316 GPCVIMASPGMLQSGLSRDLFERWCSDSRNAVIIPGYCVDGTLA----KEILSEPKEIEA 371
Query: 422 LSGKKLQ 428
L+GKKL+
Sbjct: 372 LNGKKLR 378
>gi|345018855|ref|YP_004821208.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344034198|gb|AEM79924.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 829
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 41/250 (16%)
Query: 156 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLSSL 214
+ + +G +GA + I+ +G++ F SG F I+G+ + L D++
Sbjct: 142 VTLYPAGHILGAASVYITSEEGSV-------FYSGDFSGFRQNTIEGAFIPKLRPDVAIF 194
Query: 215 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 274
+ST + D + EL E +EK++ I + GG V+IP
Sbjct: 195 EST-------YGDKLHANREL--------EETRLIEKVSSI-------INEGGKVIIPAF 232
Query: 275 RVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 334
+G +++ + + LK +Y+ V E Y P +L + +K+F G+ +
Sbjct: 233 ALGRAQEIILILKKAINKGILKTKVYVDGMVREVCRVYKLN-PNYLRQNLAKKIFKGNDI 291
Query: 335 FAHVKLIKEKKIHVFPAVHSPKLLMN-WQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 393
F +I AV P++ +E C++ S + GP+ + + + D +L
Sbjct: 292 FFDDNVI---------AVEKPEMREEIIKESCVILSSSGMITGGPSQWYVEKLAQDEKNL 342
Query: 394 LVLENEVDAE 403
+ + D E
Sbjct: 343 IAITGYQDEE 352
>gi|322790916|gb|EFZ15582.1| hypothetical protein SINV_14424 [Solenopsis invicta]
Length = 277
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+ + GG VLIP+ +G +L + + E +LK+P+Y + E+ Y W
Sbjct: 4 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITW- 62
Query: 321 CKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
Q+ +K F + F H+K + I +P + +VF+ L G
Sbjct: 63 TNQKIKKTFVQRNMFDFKHIKPFDKAYI------DNPGAM-------VVFATPGMLHAGL 109
Query: 379 TIHLLRRWSGDHNSLLVL 396
++ + ++W+ + ++++++
Sbjct: 110 SLQIFKKWAPNESNMVIM 127
>gi|332030612|gb|EGI70300.1| Integrator complex subunit 11 [Acromyrmex echinatior]
Length = 536
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 320
+ + GG VLIP+ +G +L + + E +LK+P+Y + E+ Y W
Sbjct: 168 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITW- 226
Query: 321 CKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 378
Q+ +K F + F H+K + I +P + +VF+ L G
Sbjct: 227 TNQKIKKTFVQRNMFDFKHIKPFDKAYI------DNPGAM-------VVFATPGMLHAGL 273
Query: 379 TIHLLRRWSGDHNSLLVL 396
++ + ++W+ + ++++++
Sbjct: 274 SLQIFKKWAPNESNMVIM 291
>gi|60681353|ref|YP_211497.1| hypothetical protein BF1862 [Bacteroides fragilis NCTC 9343]
gi|60492787|emb|CAH07561.1| hypothetical protein BF9343_1780 [Bacteroides fragilis NCTC 9343]
Length = 523
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 214 LDSTEDIDQSSFSDDNN 230
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|423249709|ref|ZP_17230725.1| hypothetical protein HMPREF1066_01735 [Bacteroides fragilis
CL03T00C08]
gi|423255210|ref|ZP_17236139.1| hypothetical protein HMPREF1067_02783 [Bacteroides fragilis
CL03T12C07]
gi|392652210|gb|EIY45871.1| hypothetical protein HMPREF1067_02783 [Bacteroides fragilis
CL03T12C07]
gi|392655794|gb|EIY49436.1| hypothetical protein HMPREF1066_01735 [Bacteroides fragilis
CL03T00C08]
Length = 523
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 214 LDSTEDIDQSSFSDDNN 230
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|265763179|ref|ZP_06091747.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|375358128|ref|YP_005110900.1| hypothetical protein BF638R_1832 [Bacteroides fragilis 638R]
gi|263255787|gb|EEZ27133.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301162809|emb|CBW22356.1| hypothetical protein BF638R_1832 [Bacteroides fragilis 638R]
Length = 523
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 214 LDSTEDIDQSSFSDDNN 230
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|383118036|ref|ZP_09938779.1| hypothetical protein BSHG_3728 [Bacteroides sp. 3_2_5]
gi|251944319|gb|EES84808.1| hypothetical protein BSHG_3728 [Bacteroides sp. 3_2_5]
Length = 523
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 214 LDSTEDIDQSSFSDDNN 230
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|396082284|gb|AFN83894.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon romaleae SJ-2008]
Length = 643
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 250 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME------CSSLKIPIYIIS 303
E+ S + V+ GG L+P+ +G +LL + +E S KIPIY S
Sbjct: 212 EREGRFTSIVQNVVQRGGRCLLPVFALGRAQELL----LILEEHWNSNTSLQKIPIYYAS 267
Query: 304 SVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQ 362
++A+ + T + ++ Q+ +P F +VK +K + S + +
Sbjct: 268 ALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAFKYVKNLK--------GIDS----FDDE 315
Query: 363 EPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 421
PC++ + L+ G + L RW D N++++ VD LA K I + +
Sbjct: 316 GPCVIMASPGMLQSGLSRDLFERWCSDSKNAVIIPGYCVDGTLA----KEILSEPKEIEA 371
Query: 422 LSGKKLQ 428
L+GKKL+
Sbjct: 372 LNGKKLR 378
>gi|423257937|ref|ZP_17238860.1| hypothetical protein HMPREF1055_01137 [Bacteroides fragilis
CL07T00C01]
gi|423265095|ref|ZP_17244098.1| hypothetical protein HMPREF1056_01785 [Bacteroides fragilis
CL07T12C05]
gi|387777383|gb|EIK39480.1| hypothetical protein HMPREF1055_01137 [Bacteroides fragilis
CL07T00C01]
gi|392704828|gb|EIY97963.1| hypothetical protein HMPREF1056_01785 [Bacteroides fragilis
CL07T12C05]
Length = 523
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 154 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 213
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 214 LDSTEDIDQSSFSDDNN 230
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|195995883|ref|XP_002107810.1| hypothetical protein TRIADDRAFT_19764 [Trichoplax adhaerens]
gi|190588586|gb|EDV28608.1| hypothetical protein TRIADDRAFT_19764 [Trichoplax adhaerens]
Length = 636
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 152/399 (38%), Gaps = 68/399 (17%)
Query: 136 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMD 194
++K++T+ F +E NGI +++G +GA ++I A I Y S H M
Sbjct: 143 MTKIETIHFHQEKEVNGIKFW-CYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMA 201
Query: 195 FDYRAIQGSDLILYSDLS-SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA 253
+ +++ LI+ S + +I + F+
Sbjct: 202 AEIPSVKPDVLIIESTYGVHIHEKREIREKRFT--------------------------- 234
Query: 254 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLA 311
S D V GG LIP+ +G +LL + + + IPIY SS+A++ +A
Sbjct: 235 ---STVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHTELHDIPIYYASSLAKKCMA 291
Query: 312 -YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 370
Y + K R + S +F H+ +K I F + PC+V +
Sbjct: 292 VYQTYVSAMNDKIRNQIAISNPFIFKHISNLK--GIDHFDDI----------GPCVVMAS 339
Query: 371 HWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFKPISM---------KV 416
++ G + L +W D + +V+ E + E+ P + +SM V
Sbjct: 340 PGMMQSGLSRELFEKWCTDSKNGVVIAGYCVEGTLAKEVMSEPEEVLSMSGQKLARKLSV 399
Query: 417 LQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENE----TIH 472
SF + ++ +++L P ++ + + + + V Y EN T+H
Sbjct: 400 DYISFSAHTDYEQTSEFIRMLMPPHIILVHGEQNEM--MRLKTALVREYQENPEISITVH 457
Query: 473 IPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 511
P E +L + +K + +K + +L G L
Sbjct: 458 TPRNCEEVQLYFRGEKMAKVMGSLAVEKFQDEQQLSGVL 496
>gi|308198072|ref|XP_001387057.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149389019|gb|EAZ63034.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 934
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 149 CYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY 208
++ ++I +++G +G W+I+ + Y N H+ D + G+ +
Sbjct: 140 VFDNKVVITPYNAGHTLGGTFWLITKRSDRVIYAPAWN----HSKD---SFLNGASFLSS 192
Query: 209 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKA-GG 267
S + L ++ + ++F + M S+ ++ + E+ +L +D+ A GG
Sbjct: 193 SSGNPL--SQLLRPTAFITSTD-----MGSVMSHKKRTEKFLQL-------VDATLANGG 238
Query: 268 SVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 327
+ +IP + G FL+L I ++ + IP+Y +S ++L+Y + + +W+ Q +
Sbjct: 239 AAVIPTSLSGRFLELFHLIDEHLQGAP--IPVYFLSYSGTKVLSYASNLIDWMSSSVQSQ 296
Query: 328 LFSGDPLFAHVKL-IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377
+ + L K+ + + SP+ L+ P IVF LR G
Sbjct: 297 WEEAESSTNYKNLPFDPSKVDL---LLSPEELIQLSGPKIVFCSGIDLRNG 344
>gi|71027091|ref|XP_763189.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350142|gb|EAN30906.1| hypothetical protein TP03_0171 [Theileria parva]
Length = 678
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 36/213 (16%)
Query: 248 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 307
EME +C+ D++ GG VLIP+ VG +L + + S+ PIY ++E
Sbjct: 311 EME----LCTTVHDTLINGGKVLIPVFAVGRAQELAIILNNYWNNLSISFPIYFGGGLSE 366
Query: 308 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 367
+ Y W L +E + + + +N P ++
Sbjct: 367 KATNYYKLHSSWTNNNSITNL-------------RENPFSLRNLLQFDQSFLNDNRPMVL 413
Query: 368 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL----------------ENEVDAELAVLPFKP 411
F+ + G ++ + WS + N+L+++ E + + V+ K
Sbjct: 414 FATPGMVHTGLSLKACKLWSQNPNNLILIPGYCVQGTVGNKLIAGEKTIKTNIGVMNIK- 472
Query: 412 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 444
KV SF + + L+K ++PK ++F
Sbjct: 473 --CKVRYLSFSAHADSPGILQLIKHIRPKNIVF 503
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,472,714,552
Number of Sequences: 23463169
Number of extensions: 397082487
Number of successful extensions: 949349
Number of sequences better than 100.0: 616
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 947701
Number of HSP's gapped (non-prelim): 1076
length of query: 615
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 466
effective length of database: 8,863,183,186
effective search space: 4130243364676
effective search space used: 4130243364676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)