Query 007166
Match_columns 615
No_of_seqs 284 out of 1284
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 18:52:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007166hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 100.0 2.2E-68 7.5E-73 581.9 35.0 377 11-473 22-431 (431)
2 2i7t_A Cleavage and polyadenyl 100.0 3.3E-63 1.1E-67 545.8 30.4 384 11-475 33-458 (459)
3 3af5_A Putative uncharacterize 100.0 1.4E-55 4.7E-60 503.5 36.3 385 11-473 210-650 (651)
4 2xr1_A Cleavage and polyadenyl 100.0 1E-54 3.5E-59 495.1 33.9 388 11-473 205-639 (640)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 2.4E-54 8.4E-59 492.2 34.2 387 11-473 201-635 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 5E-48 1.7E-52 443.2 36.2 310 11-401 23-371 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 1.1E-37 3.7E-42 349.1 20.2 344 11-476 30-427 (555)
8 3bk2_A RNAse J, metal dependen 100.0 1E-35 3.5E-40 334.2 26.7 347 11-477 38-443 (562)
9 2az4_A Hypothetical protein EF 100.0 4E-30 1.4E-34 279.9 13.1 333 28-473 82-429 (429)
10 4b87_A DNA cross-LINK repair 1 99.9 4.1E-26 1.4E-30 242.8 19.1 298 12-448 36-345 (367)
11 3zdk_A 5' exonuclease apollo; 99.9 5.5E-26 1.9E-30 238.9 16.8 178 28-303 22-206 (336)
12 2e7y_A TRNAse Z; tRNA maturati 99.4 4.4E-13 1.5E-17 136.2 7.3 144 12-215 19-212 (280)
13 1y44_A Ribonuclease Z; zinc-de 99.3 4.3E-12 1.5E-16 131.9 7.2 144 11-215 30-235 (320)
14 3g1p_A Protein PHNP; C-P lyase 99.2 1.2E-12 4.1E-17 132.1 1.4 140 11-215 47-191 (258)
15 2cbn_A Ribonuclease Z; phospho 99.2 7.5E-12 2.6E-16 129.0 6.7 63 11-73 32-106 (306)
16 1zkp_A Hypothetical protein BA 99.2 9.2E-12 3.2E-16 126.0 6.2 137 12-215 52-203 (268)
17 3md7_A Beta-lactamase-like; ss 99.2 1.3E-11 4.5E-16 127.0 5.2 142 13-210 78-231 (293)
18 2r2d_A AGR_PTI_140P, Zn-depend 99.1 2.9E-10 9.9E-15 115.2 11.1 108 28-187 101-216 (276)
19 3jxp_A Coenzyme PQQ synthesis 99.1 5.7E-11 1.9E-15 124.0 4.6 142 12-210 50-223 (321)
20 3esh_A Protein similar to meta 99.0 3.5E-10 1.2E-14 115.3 7.2 110 28-187 98-209 (280)
21 3zwf_A Zinc phosphodiesterase 99.0 7.9E-10 2.7E-14 117.5 10.0 63 11-73 27-105 (368)
22 3adr_A Putative uncharacterize 98.9 1.9E-09 6.4E-14 108.2 9.4 128 11-186 28-167 (261)
23 3kl7_A Putative metal-dependen 98.9 8.2E-09 2.8E-13 102.7 11.5 125 11-210 45-182 (235)
24 3m8t_A 'BLR6230 protein; subcl 98.9 3.6E-09 1.2E-13 108.0 8.7 124 12-186 64-204 (294)
25 1k07_A FEZ-1 beta-lactamase; m 98.8 9.1E-09 3.1E-13 103.6 11.0 126 12-186 34-176 (263)
26 2xf4_A Hydroxyacylglutathione 98.8 3.1E-09 1.1E-13 103.2 7.2 122 12-186 24-153 (210)
27 3l6n_A Metallo-beta-lactamase; 98.8 7.9E-09 2.7E-13 100.8 10.0 109 11-186 39-160 (219)
28 1ztc_A Hypothetical protein TM 98.8 1.7E-09 5.7E-14 106.4 4.4 120 12-186 44-176 (221)
29 3dha_A N-acyl homoserine lacto 98.8 5.6E-09 1.9E-13 104.4 6.1 99 28-187 98-198 (254)
30 2fhx_A SPM-1; metallo-beta-lac 98.8 3.2E-08 1.1E-12 98.3 11.2 134 13-187 41-187 (246)
31 1e5d_A Rubredoxin\:oxygen oxid 98.8 1.9E-08 6.5E-13 107.5 10.2 111 12-185 43-166 (402)
32 2vw8_A PA1000, PQSE; quinolone 98.7 1.5E-08 5.3E-13 104.1 7.8 136 11-186 33-182 (303)
33 2zwr_A Metallo-beta-lactamase 98.7 1.7E-08 5.7E-13 98.0 7.2 118 12-186 22-146 (207)
34 4efz_A Metallo-beta-lactamase 98.7 6.1E-08 2.1E-12 99.7 11.9 123 12-186 28-176 (298)
35 1p9e_A Methyl parathion hydrol 98.7 1.4E-08 4.9E-13 106.1 7.0 129 12-187 106-258 (331)
36 3aj3_A MLR6805 protein, 4-pyri 98.7 3.8E-08 1.3E-12 99.5 9.9 122 28-186 86-209 (274)
37 4ax1_B Metallo-beta-lactamase 98.7 1.5E-08 5.1E-13 103.7 6.2 127 11-186 66-208 (303)
38 1m2x_A Class B carbapenemase B 98.7 3.6E-08 1.2E-12 96.7 7.9 108 12-186 36-156 (223)
39 4hl2_A Beta-lactamase NDM-1; s 98.6 9.6E-09 3.3E-13 102.1 3.6 117 12-187 57-184 (243)
40 3q6v_A Beta-lactamase; metallo 98.6 4.1E-08 1.4E-12 96.5 7.2 60 12-74 35-105 (233)
41 2zo4_A Metallo-beta-lactamase 98.6 6.3E-08 2.2E-12 100.0 9.0 142 12-187 31-193 (317)
42 2ohh_A Type A flavoprotein FPR 98.6 4.5E-08 1.5E-12 104.6 7.6 112 12-186 44-172 (404)
43 3hnn_A Putative diflavin flavo 98.6 3.9E-08 1.3E-12 99.2 6.6 111 12-185 51-175 (262)
44 1a7t_A Metallo-beta-lactamase; 98.6 6.3E-08 2.2E-12 95.5 7.7 109 12-187 46-167 (232)
45 3iog_A Beta-lactamase; hydrola 98.6 2.9E-08 1E-12 97.1 5.1 62 11-75 31-103 (227)
46 2wyl_A L-ascorbate-6-phosphate 98.6 1.8E-07 6E-12 98.9 11.2 118 28-209 107-248 (360)
47 1ycg_A Nitric oxide reductase; 98.6 1.1E-07 3.7E-12 101.4 9.5 110 12-185 44-167 (398)
48 1mqo_A Beta-lactamase II; alph 98.6 8.7E-08 3E-12 94.2 7.9 108 12-186 50-170 (227)
49 2q9u_A A-type flavoprotein; fl 98.6 8.2E-08 2.8E-12 103.1 8.3 111 12-185 49-172 (414)
50 1sml_A Protein (penicillinase) 98.6 8.9E-08 3.1E-12 96.6 7.7 124 12-186 47-186 (269)
51 2gcu_A Putative hydroxyacylglu 98.5 1.9E-07 6.4E-12 93.4 8.4 105 12-187 28-145 (245)
52 3bv6_A Metal-dependent hydrola 98.5 3.9E-07 1.3E-11 97.0 11.4 118 28-209 131-273 (379)
53 2p18_A Glyoxalase II; metallop 98.5 1.4E-07 4.9E-12 97.7 7.7 106 12-186 51-182 (311)
54 4dik_A Flavoprotein; TM0755, e 98.5 2.7E-07 9.3E-12 99.2 9.4 111 11-187 60-183 (410)
55 2qed_A Hydroxyacylglutathione 98.5 1.6E-07 5.4E-12 94.7 7.0 101 12-186 29-136 (258)
56 4ad9_A Lactb2, beta-lactamase- 98.5 9.7E-08 3.3E-12 97.4 5.4 113 12-187 41-168 (289)
57 1qh5_A Glyoxalase II, protein 98.4 2.3E-07 7.8E-12 93.7 6.7 103 12-186 23-136 (260)
58 1xm8_A Glyoxalase II; structur 98.4 1.1E-07 3.9E-12 95.5 4.4 103 13-186 24-133 (254)
59 3tp9_A Beta-lactamase and rhod 98.4 8.6E-08 3E-12 105.1 3.8 113 11-186 26-151 (474)
60 3rpc_A Possible metal-dependen 98.4 4.7E-07 1.6E-11 91.3 8.8 112 29-210 63-191 (264)
61 3r2u_A Metallo-beta-lactamase 98.3 7.3E-07 2.5E-11 97.6 7.7 113 11-187 47-172 (466)
62 2bib_A CBPE, teichoic acid pho 98.3 3.6E-07 1.2E-11 102.0 5.3 129 28-209 75-227 (547)
63 1vjn_A Zn-dependent hydrolase 98.3 1.4E-06 4.6E-11 85.7 8.1 58 148-210 81-146 (220)
64 2y8b_A Metallo-B-lactamase; hy 98.3 9.6E-07 3.3E-11 89.1 7.1 113 12-187 77-200 (265)
65 1jjt_A IMP-1 metallo beta-lact 98.2 6.7E-07 2.3E-11 87.9 4.2 54 12-68 42-105 (228)
66 2p97_A Hypothetical protein; p 97.9 4.8E-06 1.7E-10 80.2 4.1 101 12-186 33-139 (201)
67 4eyb_A Beta-lactamase NDM-1; m 97.8 1.1E-05 3.7E-10 81.5 5.1 54 12-68 84-148 (270)
68 2cfu_A SDSA1; SDS-hydrolase, l 97.5 0.0001 3.6E-09 83.8 7.7 58 12-69 132-204 (658)
69 2p4z_A Metal-dependent hydrola 97.3 5.5E-05 1.9E-09 77.0 1.9 54 12-66 42-104 (284)
70 3h3e_A Uncharacterized protein 96.3 0.00094 3.2E-08 67.3 1.4 46 15-65 40-92 (267)
71 2yhe_A SEC-alkyl sulfatase; hy 94.3 0.0029 9.8E-08 71.8 0.0 56 12-67 142-212 (668)
72 2wyl_A L-ascorbate-6-phosphate 71.3 3.7 0.00013 42.4 5.0 59 422-480 257-330 (360)
73 3rpc_A Possible metal-dependen 71.1 3.8 0.00013 40.2 4.8 52 422-473 202-264 (264)
74 3bv6_A Metal-dependent hydrola 69.7 4 0.00014 42.6 4.8 59 422-480 282-355 (379)
75 3kl7_A Putative metal-dependen 47.3 34 0.0012 32.6 6.8 37 420-456 183-219 (235)
76 1y44_A Ribonuclease Z; zinc-de 35.6 36 0.0012 33.8 5.0 58 421-478 244-309 (320)
77 2e7y_A TRNAse Z; tRNA maturati 34.4 38 0.0013 32.6 4.9 52 422-473 220-280 (280)
78 3md7_A Beta-lactamase-like; ss 34.3 39 0.0013 33.2 5.0 54 421-474 237-292 (293)
79 3g1p_A Protein PHNP; C-P lyase 29.4 1.2E+02 0.0041 28.9 7.5 75 360-451 153-227 (258)
80 3zwf_A Zinc phosphodiesterase 26.7 88 0.003 32.0 6.3 57 422-478 287-362 (368)
81 1zkp_A Hypothetical protein BA 25.8 81 0.0028 30.2 5.5 51 422-472 211-267 (268)
82 1vjn_A Zn-dependent hydrolase 24.2 61 0.0021 30.5 4.2 29 422-450 149-177 (220)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=2.2e-68 Score=581.88 Aligned_cols=377 Identities=19% Similarity=0.200 Sum_probs=317.7
Q ss_pred CCccccccccchhhhc-----------ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIKL-----------YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELIC 78 (615)
Q Consensus 11 ~~~~~lldcg~~f~~~-----------~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~ 78 (615)
.+..+|+|||. +.+. .+.+| +|||||+|.||+|+||+|.+. ||+++||||++|+++++.++.|+.+
T Consensus 22 ~~~~iLID~G~-~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~-~~~~~Iy~t~~t~~l~~~~l~d~~~ 99 (431)
T 3iek_A 22 GGRRVLLDCGM-FQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE-GYRGPVYATRATVLLMEIVLEDALK 99 (431)
T ss_dssp TTEEEEECCCC-CCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT-TCCSCEEECHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCC-CcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc-CCCCeEEEcHHHHHHHHHHHHHHHh
Confidence 46789999997 3221 25789 999999999999999999984 8999999999999999999999875
Q ss_pred HHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchH--HHHHHHHhcceeecCCcEEEeCCcEEE
Q 007166 79 MNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILII 156 (615)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~Y~q~~~l~g~l~i 156 (615)
+++ .++| +|++.++.+++.++|++++++ +++++
T Consensus 100 ~~~--------------------------------------------~~~y~~~~~~~~~~~~~~l~~~~~~~l-~g~~v 134 (431)
T 3iek_A 100 VMD--------------------------------------------EPFFGPEDVEEALGHLRPLEYGEWLRL-GALSL 134 (431)
T ss_dssp HCS--------------------------------------------SCSSCHHHHHHHHHTEEECCTTCCEEE-TTEEE
T ss_pred hcc--------------------------------------------cCCCCHHHHHHHHhccEEcCCCCeEEe-CCEEE
Confidence 431 1566 899999999999999999999 67999
Q ss_pred EEeccccccceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCCchhhhh
Q 007166 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELM 236 (615)
Q Consensus 157 t~~~AGHiLGsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~~e~~~ 236 (615)
+++++||++||++|.|+.++++|+||||+...... ...++..+.++|+||+|| ||+. + .++.
T Consensus 135 ~~~~agH~~Gs~~~~i~~~~~~ilfsGD~~~~~~~-~l~~~~~~~~~D~LI~Es--Ty~~---~-------~h~~----- 196 (431)
T 3iek_A 135 AFGQAGHLPGSAFVVAQGEGRTLVYSGDLGNREKD-VLPDPSLPPLADLVLAEG--TYGD---R-------PHRP----- 196 (431)
T ss_dssp EEEECCSSTTCEEEEEEETTEEEEECCCCCCTTSS-SSCCCCBCCCCSEEEEEC--TTTT---C-------CCCC-----
T ss_pred EEEeCCCCcCceEEEEEECCEEEEEeCCCCCCCCc-ccCCccccCCccEEEEEc--ccCC---c-------CCCC-----
Confidence 99999999999999999999999999998754321 111334467899999999 8861 0 1211
Q ss_pred hccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHHHhCCCc-ccEEEECchHHHHHHHHHH
Q 007166 237 NSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNT 315 (615)
Q Consensus 237 ~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~~l~-vpIy~~s~~a~~~~~~~~~ 315 (615)
+. ++.++|++.|.+++++||+||||+|++||+|||+++|+++|++ ++ +|||++||||.+++++|+.
T Consensus 197 ---------~~--~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~qell~~l~~~~~~--~~~~pi~~~s~~a~~~~~~~~~ 263 (431)
T 3iek_A 197 ---------YR--ETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHR--LPRAPIYLDSPMAGRVLSLYPR 263 (431)
T ss_dssp ---------HH--HHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHGGG--SCCCCEEEECHHHHHHHHHGGG
T ss_pred ---------hH--HHHHHHHHHHHHHHHcCCeEEEEeccchHHHHHHHHHHHHHHh--ccCCCEEEeChHHHHHHHHHHH
Confidence 12 2345688999999999999999999999999999999999988 65 9999999999999999999
Q ss_pred hHHhhhHHHHHHHhcCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCcEE
Q 007166 316 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 395 (615)
Q Consensus 316 ~~ewl~~~~~~~~~~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~d~~N~II 395 (615)
+.|||++++++.+..+++||.+..+ +.+++......++..++||||||+||||++|+++++|++|++||+|+||
T Consensus 264 ~~~~~~~~~~~~~~~~~~pf~~~~~------~~~~~~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~~~n~ii 337 (431)
T 3iek_A 264 LVRYFSEEVQAHFLQGKNPFRPAGL------EVVEHTEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDPRNALV 337 (431)
T ss_dssp GGGGSCHHHHHHHHTTSCTTCCTTE------EECCSHHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTCTTCEEE
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCe------EEeCCHHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCCCCCeEE
Confidence 9999999999988888889866443 3333332222345679999999999999999999999999999999999
Q ss_pred ecCCcchhcc-------------cCCCceeeeEEEEe-ecccCCCHhhHHHHHHhcCCCEEEEeccCcccccccc----c
Q 007166 396 LENEVDAELA-------------VLPFKPISMKVLQC-SFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD----V 457 (615)
Q Consensus 396 l~g~~~~~~~-------------l~~~~~v~~~v~~~-~fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~~~l~----~ 457 (615)
||||+.++.. .+...+|+|+|.++ +||||||+++|++|++.++ +|+|||||+++++.|+ +
T Consensus 338 ~~gyq~~gt~g~~l~~~~~~v~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~~~~--~v~lvHge~~~~~~l~~~l~~ 415 (431)
T 3iek_A 338 FVGYQPQGGLGAEIIARPPAVRILGEEVPLRASVHTLGGFSGHAGQDELLDWLQGEP--RVVLVHGEEEKLLALGKLLAL 415 (431)
T ss_dssp ECSCCCTTSHHHHHHTCCSEEEETTEEEECCSEEEECGGGCSSCCHHHHHHHHTTCS--EEEEESSCHHHHHHHHHHHHH
T ss_pred EECCCCCCChHHHhhcCCcEEEECCEEEEEEEEEEEECCccccCCHHHHHHHHHhCC--eEEEECCCHHHHHHHHHHHHH
Confidence 9999887531 23457899999999 6999999999999999874 8999999999999997 3
Q ss_pred CCceeeecCCCcEEEe
Q 007166 458 TSFSVSHYSENETIHI 473 (615)
Q Consensus 458 ~~~~v~~p~~ge~i~l 473 (615)
.+.++++|.+||++++
T Consensus 416 ~~~~~~~p~~~~~~~~ 431 (431)
T 3iek_A 416 RGQEVSLARFGEGVPV 431 (431)
T ss_dssp TTCEEEECCTTCCEEC
T ss_pred hCCcEEECCCCCEEeC
Confidence 4559999999999875
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=3.3e-63 Score=545.76 Aligned_cols=384 Identities=17% Similarity=0.256 Sum_probs=280.9
Q ss_pred CCccccccccchh----------h-hcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIF----------I-KLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELIC 78 (615)
Q Consensus 11 ~~~~~lldcg~~f----------~-~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~ 78 (615)
.+..+|+|||... . ...+.+| +|||||+|.||+|+||++.++.+|+++||||++|+++++.++.|+.+
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~ 112 (459)
T 2i7t_A 33 KGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVK 112 (459)
T ss_dssp TTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHH
Confidence 4678999999731 1 1226789 99999999999999999998789999999999999999999988764
Q ss_pred HHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchH--HHHHHHHhcceeecCCcEEEeCCcEEE
Q 007166 79 MNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILII 156 (615)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~Y~q~~~l~g~l~i 156 (615)
+++. . .+.++| ++++.++.+++.++|++++.+ +++++
T Consensus 113 ~~~~------------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~v 151 (459)
T 2i7t_A 113 VSNI------------------------------------S----ADDMLYTETDLEESMDKIETINFHEVKEV-AGIKF 151 (459)
T ss_dssp -------------------------------------------------CCCHHHHHHHGGGEEEECTTCCEEE-TTEEE
T ss_pred Hhcc------------------------------------c----ccccccCHHHHHHHHhccEEeCCCCEEEE-CCEEE
Confidence 4320 0 113556 789999999999999999999 46999
Q ss_pred EEeccccccceEEEEEEeCCeeEEEecCCCCCC-CCCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCCchhhh
Q 007166 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFAS-GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEEL 235 (615)
Q Consensus 157 t~~~AGHiLGsa~~~I~~~~~~IvYtgD~s~~~-~~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~~e~~ 235 (615)
+++++||++||++|.|+.++++|+||||+.... .+....+. ...++|+||+|+ ||+.. .+..
T Consensus 152 ~~~~~GH~~Gs~~~~i~~~~~~il~sGD~~~~~~~~~~~~~~-~~~~~D~Li~Es--ty~~~----------~~~~---- 214 (459)
T 2i7t_A 152 WCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEI-PNIKPDILIIES--TYGTH----------IHEK---- 214 (459)
T ss_dssp EEEECCSSTTCEEEEEEETTEEEEECCSCCCC-----CCCCC-CSSCCSEEEEEC--TTTTC----------CCCC----
T ss_pred EEEeCCCccCcEEEEEEECCcEEEEeCCCCCCCCcccCCCCc-CCCCCeEEEECC--CCCCC----------CCCC----
Confidence 999999999999999999999999999987643 22222222 124899999999 88610 1111
Q ss_pred hhccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHHHhC-CCc-ccEEEECchHHHHHHHH
Q 007166 236 MNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS-SLK-IPIYIISSVAEELLAYT 313 (615)
Q Consensus 236 ~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~-~l~-vpIy~~s~~a~~~~~~~ 313 (615)
+.+ +.++|++.|.+++++||+|+||+|++||+|||+++|+++|+++ .++ +|||++||||.+++++|
T Consensus 215 ----------~~~--~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~~~~~~ 282 (459)
T 2i7t_A 215 ----------REE--REARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVY 282 (459)
T ss_dssp ----------HHH--HHHHHHHHHHHHHHTTCEEEEECCSSSSHHHHHHHHHHHHHHCGGGTTSCEEEC-----------
T ss_pred ----------hHH--HHHHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHHHHHHhcCCCCCccEEEECHHHHHHHHHH
Confidence 122 3356889999999999999999999999999999999999986 354 99999999999999999
Q ss_pred HHhHHhhhHHHHHHHhcCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCc
Q 007166 314 NTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 393 (615)
Q Consensus 314 ~~~~ewl~~~~~~~~~~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~d~~N~ 393 (615)
+.+.+||++..++.+. ..+||.+..+ ..+.+. +.. ...+||||||+||||++|+++++|++|++||+|+
T Consensus 283 ~~~~~~~~~~~~~~~~-~~~p~~~~~~------~~~~~~---~~~-~~~~~~viia~~gm~~~g~~~~~l~~~~~~~~~~ 351 (459)
T 2i7t_A 283 QTYVNAMNDKIRKQIN-INNPFVFKHI------SNLKSM---DHF-DDIGPSVVMASPGMMQSGLSRELFESWCTDKRNG 351 (459)
T ss_dssp -----------------------CCSE------EECCCT---TSS-CCCSSEEEEESCTTCSSHHHHHHHHHHTTCTTCE
T ss_pred HHHHHHHhHHHHHHhc-ccCCcCCCcc------eeeCCH---HHh-cCCCCeEEEEcCcccCCCHHHHHHHHHcCCCCCe
Confidence 9999999998877554 4667754322 111111 111 3468999999999999999999999999999999
Q ss_pred EEecCCcchhcc--------------cCCCceeeeEEEEeecccCCCHhhHHHHHHhcCCCEEEEeccCccccccccc--
Q 007166 394 LVLENEVDAELA--------------VLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDV-- 457 (615)
Q Consensus 394 IIl~g~~~~~~~--------------l~~~~~v~~~v~~~~fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~~~l~~-- 457 (615)
|||+||+..+.. .+..++++|+|.+++||+|||+.+|++|++.++|++|++|||+++++..|++
T Consensus 352 ii~~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~v~~vHGe~~~~~~~~~~l 431 (459)
T 2i7t_A 352 VIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAAL 431 (459)
T ss_dssp EEECSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHH
T ss_pred EEEEecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHHH
Confidence 999999765431 1345678999999999999999999999999999999999999999888762
Q ss_pred ---C------CceeeecCCCcEEEeCC
Q 007166 458 ---T------SFSVSHYSENETIHIPS 475 (615)
Q Consensus 458 ---~------~~~v~~p~~ge~i~l~~ 475 (615)
. ++++++|++||++++.+
T Consensus 432 ~~~~~~~~~~~~~~~~p~~~~~~~~~~ 458 (459)
T 2i7t_A 432 IREYEDNDEVHIEVHNPRNTEAVTLNF 458 (459)
T ss_dssp HHHHSSCTTCCCEEECCCTTCCEEEEE
T ss_pred HHHhccccccCceEEeCCCCCEEEEEe
Confidence 1 58999999999999865
No 3
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=1.4e-55 Score=503.48 Aligned_cols=385 Identities=18% Similarity=0.240 Sum_probs=311.2
Q ss_pred CCccccccccchhhh---------------c--cc--CcE-EEEEecCCccccchHHHhhcccC-CCceEEeeHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK---------------L--YA--RKI-LILKTGRSPMGMLGLPFLTRMEG-FSAKIYITEAAARIG 69 (615)
Q Consensus 11 ~~~~~lldcg~~f~~---------------~--~~--~~I-aVllSHah~dH~gaLP~L~~~~g-f~g~Iy~T~pT~~l~ 69 (615)
.+..+|+|||..... . .+ .+| +|||||+|.||+|+||+|.+. + |+++||||.+|.++.
T Consensus 210 ~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~-~~~~~pIy~t~~t~~ll 288 (651)
T 3af5_A 210 DESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRY-NLFDGPIYTTPPTRDLM 288 (651)
T ss_dssp SSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHT-TCCCSCEEECHHHHHHH
T ss_pred CCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhc-CCCCceEEEcHHHHHHH
Confidence 367899999974321 1 23 779 999999999999999999974 6 899999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchH--HHHHHHHhcceeecCCcE
Q 007166 70 QLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEE 147 (615)
Q Consensus 70 ~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~Y~q~ 147 (615)
+.++.|+.++++. . .+.+.| +|++.++.+++.++|+++
T Consensus 289 ~~~l~d~~~~~~~------------------------------------~----~~~~~~~~~~~~~~~~~~~~l~~g~~ 328 (651)
T 3af5_A 289 VLLQKDFIEIQQS------------------------------------N----GQDPLYRPRDIKEVIKHTITLDYGEV 328 (651)
T ss_dssp HHHHHHHHHHHHH------------------------------------T----TCCCSSCHHHHHHHHHTEEECCTTCC
T ss_pred HHHHHHHHHHhhh------------------------------------c----ccCCCCCHHHHHHhhhcEEEeCCCCE
Confidence 9999998876531 0 012456 788888889999999999
Q ss_pred EEeCCcEEEEEeccccccceEEEEEEeCCe--eEEEecCCCCCCC-CCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCc
Q 007166 148 ACYNGILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFASG-HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 224 (615)
Q Consensus 148 ~~l~g~l~it~~~AGHiLGsa~~~I~~~~~--~IvYtgD~s~~~~-~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~ 224 (615)
+++.++++++++++||++||++|.|+.++. +++||||+..... +....+. .+.++|+||+|| ||+...+
T Consensus 329 ~~l~ggi~v~~~~~gH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~-~~~~~DvLI~Es--T~~~~~~----- 400 (651)
T 3af5_A 329 RDISPDIRLTLHNAGHILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANA-KFPRLETLVMES--TYGGAND----- 400 (651)
T ss_dssp EEEETTEEEEEEECSSSTTCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCC-BCSSCSEEEEEC--TTCSTTC-----
T ss_pred EEecCCEEEEEecCCCCcCcEEEEEEECCCceEEEEeCCCCCCcccccccccc-cCCCCCEEEECC--CCCCCCC-----
Confidence 999567999999999999999999998877 9999999876532 2222221 256899999999 7862100
Q ss_pred ccCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHHHhCCCcccEEEECc
Q 007166 225 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISS 304 (615)
Q Consensus 225 ~~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~~l~vpIy~~s~ 304 (615)
.++. +. +..++|++.|.+++++||+||||+|++||+|||+++|.++|+++.+++|||++|
T Consensus 401 ---~h~s--------------~~--~~~~~l~~~i~~~l~~~g~vlIp~favgR~qell~~l~~~~~~~~l~~~I~~dg- 460 (651)
T 3af5_A 401 ---IQMP--------------RE--EAEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG- 460 (651)
T ss_dssp ---CCCC--------------HH--HHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHHTTTCCCSCEEEES-
T ss_pred ---CCCC--------------HH--HHHHHHHHHHHHHHhCCCEEEEeccCccHHHHHHHHHHHhhhhcCCCCcEEEec-
Confidence 0111 12 233568889999999999999999999999999999999998887789999987
Q ss_pred hHHHHHHHHHHhHHhhhHHHHHHHh-cCCCCCcchhhhhcccccccCCcCChhhh---hcCCCCEEEEecCCCCCcchHH
Q 007166 305 VAEELLAYTNTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSPKLL---MNWQEPCIVFSPHWSLRLGPTI 380 (615)
Q Consensus 305 ~a~~~~~~~~~~~ewl~~~~~~~~~-~~~~pF~~~~l~k~~~l~~~~~i~s~~~~---~~~~~P~VV~as~gmL~~G~s~ 380 (615)
++.+++++|..+.+||++..++.++ .+.+||.+..+ .. +.+.+.. ....+||||||++|||++|+++
T Consensus 461 ~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~------~~---v~~~~~~~~~~~~~~~~vIia~~gm~~gg~~~ 531 (651)
T 3af5_A 461 MIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIF------HP---VANSRERQDIIDSNEPAIIIASSGMLVGGPSV 531 (651)
T ss_dssp SHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTE------EE---CCSHHHHHHHHHSCSCEEEEESCTTSSSSHHH
T ss_pred hHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCce------EE---cCCHHHHHHHhcCCCCEEEEECCCCCCCCHHH
Confidence 9999999999999999998877664 56788865433 12 2221121 1337899999999999999999
Q ss_pred HHHHHHcCCCCCcEEecCCcchhcc----------c------CC--CceeeeEEEEee-cccCCCHhhHHHHHHhcC--C
Q 007166 381 HLLRRWSGDHNSLLVLENEVDAELA----------V------LP--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--P 439 (615)
Q Consensus 381 ~ll~~~~~d~~N~IIl~g~~~~~~~----------l------~~--~~~v~~~v~~~~-fs~haD~~~l~~~i~~l~--P 439 (615)
++|++|++||+|+|||+||+.++.. + +. .++++|+|..++ ||+|||+++|.+|++.++ |
T Consensus 532 ~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P 611 (651)
T 3af5_A 532 EYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRP 611 (651)
T ss_dssp HHHHHHTTCTTCEEEECSCCCTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHHHHHHCBSCC
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHHHHHHhhcCC
Confidence 9999999999999999999877530 0 22 445889999998 999999999999999998 9
Q ss_pred CEEEEeccCccccccccc-----CCceeeecCCCcEEEe
Q 007166 440 KLVLFPEEWRTHVSFSDV-----TSFSVSHYSENETIHI 473 (615)
Q Consensus 440 ~~vilvHG~~~~~~~l~~-----~~~~v~~p~~ge~i~l 473 (615)
++||+|||+...+..+++ .|+++++|++||++++
T Consensus 612 ~~vi~vHGe~~~~~~la~~~~~~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 612 ERIITVHGEPQKCLDLATSIHRKFGISTRAPNNLDTIRL 650 (651)
T ss_dssp SEEEEESSCHHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred CEEEEEcCCHHHHHHHHHHHHHhcCCeEEECCCCCEEEe
Confidence 999999999998877762 4889999999999986
No 4
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=1e-54 Score=495.06 Aligned_cols=388 Identities=13% Similarity=0.189 Sum_probs=297.9
Q ss_pred CCccccccccchhh---------h---c-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFI---------K---L-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL 76 (615)
Q Consensus 11 ~~~~~lldcg~~f~---------~---~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~ 76 (615)
.+..+|+|||.... + . ...+| +|||||+|.||+|+||+|.+. +|+++||||++|.++.+.++.|+
T Consensus 205 ~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~-~~~~~Iy~t~~t~~ll~~~l~d~ 283 (640)
T 2xr1_A 205 PESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY-GYEGPVYCTPPTRDLMVLLQLDY 283 (640)
T ss_dssp SSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT-TCCSCEEECHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc-CCCCeEEECHHHHHHHHHHHHHH
Confidence 36789999997421 1 2 45679 999999999999999999974 78999999999999999999998
Q ss_pred HHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchH--HHHHHHHhcceeecCCcEEEeCCcE
Q 007166 77 ICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGIL 154 (615)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~Y~q~~~l~g~l 154 (615)
.++.+.. +. .+.| +|++.++.+++.++|++++++.+++
T Consensus 284 ~~~~~~~-----------------------------------g~-----~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~ 323 (640)
T 2xr1_A 284 IDVAAKE-----------------------------------GK-----KIPYESGMVAKTLKHTIPLDYEEVTDIAPDI 323 (640)
T ss_dssp HHHHHHH-----------------------------------TC-----CCCSCHHHHHHHHHTEEECCTTCCEEEETTE
T ss_pred HHHhhhc-----------------------------------cc-----CCCCCHHHHHHHHhceEEeCCCCEEEecCCE
Confidence 8765310 11 2455 7888889999999999999996679
Q ss_pred EEEEeccccccceEEEEEEeCCe--eEEEecCCCCCC-CCCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCCc
Q 007166 155 IIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFAS-GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNN 231 (615)
Q Consensus 155 ~it~~~AGHiLGsa~~~I~~~~~--~IvYtgD~s~~~-~~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~ 231 (615)
+++++++||++||++|.++.++. +++||||+.... ......+. ...++|+||+|| ||+...+ .++.
T Consensus 324 ~v~~~~~GH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~-~~~~~DvLi~Es--T~g~~~~--------~h~s 392 (640)
T 2xr1_A 324 KLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVN-KFPRVETVISEA--TYGNANA--------FQPA 392 (640)
T ss_dssp EEEEEECSSSTTCEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCC-BCSCCSEEEEEC--TTCSTTC--------CCCC
T ss_pred EEEEEcCCCCcCcEEEEEEECCceEEEEEECCCCCCCccccccccc-cCCCCcEEEECC--CCCCCcc--------CCCC
Confidence 99999999999999999998877 999999987643 22222211 246899999999 7861100 0111
Q ss_pred hhhhhhccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHHHhCCCc-ccEEEECchHHHHH
Q 007166 232 WEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELL 310 (615)
Q Consensus 232 ~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~~l~-vpIy~~s~~a~~~~ 310 (615)
+ .+...+|.+.|.+++++||+||||+|++||+||+++.|.++++++.++ +|||++| ++.+++
T Consensus 393 --------------~--~~~~~~l~~~i~~~~~~~g~vlIp~favGR~qell~~l~~~~~~~~~~~~~V~~dg-~a~~~~ 455 (640)
T 2xr1_A 393 --------------L--KDAEKHLQMVVKNTIERGGIAVIPAFAVGRSQEVMIVLEESIRKGLIPEVPVYLDG-MIWEAT 455 (640)
T ss_dssp --------------H--HHHHHHHHHHC--------CEEEECCTTTHHHHHHHHHHHHHHHTSSCCCCEEEES-SHHHHH
T ss_pred --------------H--HHHHHHHHHHHHHHHhcCCeEEEEecccchHHHHHHHHHHHHHhCCCCCCcEEEEh-HHHHHH
Confidence 1 123356888999999999999999999999999999999999988776 9999987 999999
Q ss_pred HHHHHhHHhhhHHHHHHHh-cCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcCC
Q 007166 311 AYTNTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 389 (615)
Q Consensus 311 ~~~~~~~ewl~~~~~~~~~-~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~d 389 (615)
++|..+.+||++..++.++ .+.+||.+..+ ..+++..........++||||||++|||++|+++++|++|++|
T Consensus 456 ~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~------~~~~~~~~~~~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~ 529 (640)
T 2xr1_A 456 AIHATHPEYLNNDLRKLIFQKGQNPFLSECF------KPVDSHEARQKIIQNPQPCVILATSGMMNGGPVMEYFKAFAED 529 (640)
T ss_dssp HHHHHCGGGSCHHHHHHC------CTTCTTE------EEEC-CHHHHHC----CCCEEEESCTTSSSSHHHHHHHHHSSC
T ss_pred HHHHHhHhhhcHHHHHHHHhcccCcccCCce------EEeCCHHHHHHHhcCCCCeEEEeCCCccCCChHHHHHHHhhCC
Confidence 9999999999998876664 55778855433 1112110001111237899999999999999999999999999
Q ss_pred CCCcEEecCCcchhcc----------c------CC--CceeeeEEEEee-cccCCCHhhHHHHHHhcC--CCEEEEeccC
Q 007166 390 HNSLLVLENEVDAELA----------V------LP--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--PKLVLFPEEW 448 (615)
Q Consensus 390 ~~N~IIl~g~~~~~~~----------l------~~--~~~v~~~v~~~~-fs~haD~~~l~~~i~~l~--P~~vilvHG~ 448 (615)
|+|+|||+||+.++.. + +. .++++|+|..++ ||+|||+++|++|++.++ |++|++|||+
T Consensus 530 ~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe 609 (640)
T 2xr1_A 530 PRNTLVFVGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVKRMQPRPERVFTEHGD 609 (640)
T ss_dssp TTCEEEECSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHHTCBSCCSEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHHHhccCCCEEEEECCC
Confidence 9999999999877531 0 22 456899999997 999999999999999998 9999999999
Q ss_pred cccccccc-----cCCceeeecCCCcEEEe
Q 007166 449 RTHVSFSD-----VTSFSVSHYSENETIHI 473 (615)
Q Consensus 449 ~~~~~~l~-----~~~~~v~~p~~ge~i~l 473 (615)
+..+..++ +.|+++++|++||++++
T Consensus 610 ~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 610 EKACVDLASSVYKKLKIETRALTNLETVRL 639 (640)
T ss_dssp HHHHHHHHHHHHHHHCCEEEECCTTCEEEC
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCCCCEEEe
Confidence 99987776 24899999999999976
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=2.4e-54 Score=492.21 Aligned_cols=387 Identities=16% Similarity=0.216 Sum_probs=309.8
Q ss_pred CCccccccccchhhh--------------cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK--------------LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEE 75 (615)
Q Consensus 11 ~~~~~lldcg~~f~~--------------~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D 75 (615)
.+..+|+|||..... ....+| +|||||+|.||+||||+|.+. +|+++||||++|.++.+.++.|
T Consensus 201 ~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~-~~~~~Iy~t~~t~~l~~~~l~d 279 (636)
T 2ycb_A 201 PNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY-GYDGPVYCTAPTRDLMTLLQLD 279 (636)
T ss_dssp SSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT-TCCSCEEECHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc-CCCCeEEEcchHHHHHHHHHHH
Confidence 357899999964211 236789 999999999999999999974 7899999999999999999999
Q ss_pred HHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchH--HHHHHHHhcceeecCCcEEEeCCc
Q 007166 76 LICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGI 153 (615)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~~i~~v~Y~q~~~l~g~ 153 (615)
+.+++++. + +.+.| +|++.++.++..++|++++++.++
T Consensus 280 ~~~~~~~~-----------------------------------~-----~~~~~~~~~i~~~~~~~~~l~~g~~~~l~gg 319 (636)
T 2ycb_A 280 HIDIAHRE-----------------------------------D-----EPLPFNVKHVKKSVKHTITLDYGEVTDIAPD 319 (636)
T ss_dssp HHHHHHHH-----------------------------------T-----CCCSCCHHHHHHHHHTEEECCTTCCEEEETT
T ss_pred HHHhhhhc-----------------------------------C-----CCCCCCHHHHHHHHhceEEeCCCCEEEecCC
Confidence 88665310 1 12455 788889999999999999999667
Q ss_pred EEEEEeccccccceEEEEEEeCCe--eEEEecCCCCCCC-CCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCC
Q 007166 154 LIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFASG-HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNN 230 (615)
Q Consensus 154 l~it~~~AGHiLGsa~~~I~~~~~--~IvYtgD~s~~~~-~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~ 230 (615)
++++++++||++||++|.|+.++. +|+||||+..... +....+. .+.++|+||+|| ||+...+ .++
T Consensus 320 i~v~~~~~gH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~-~~~~~D~LI~Es--T~~~~~~--------~h~ 388 (636)
T 2ycb_A 320 IRLTLHNAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAAAN-RFPRIETLVMES--TYGGHED--------VQP 388 (636)
T ss_dssp EEEEEEECCSSTTCEEEEEEETTTTTCEEECCSCCSSCCSSSCCCCC-CCSCCSEEEEEC--TTCSGGG--------CCC
T ss_pred eEEEEeCCCCCCCcEEEEEEECCCeEEEEEECCCCCCcccccCCccc-CCCCCeEEEECC--CCCCCCC--------CCC
Confidence 999999999999999999999877 9999999876432 2222211 256899999999 7862100 011
Q ss_pred chhhhhhccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHHHhCCCc-ccEEEECchHHHH
Q 007166 231 NWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEEL 309 (615)
Q Consensus 231 ~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~~l~-vpIy~~s~~a~~~ 309 (615)
. +. +..++|.+.|.+++++||+||||+|++||+|||+++|.++|+++.++ +|||+++ ++.++
T Consensus 389 s--------------~~--~~~~~l~~~i~~~~~~~g~vlIp~fa~GR~qell~~l~~~~~~~~~~~~~V~~dg-~~~~~ 451 (636)
T 2ycb_A 389 S--------------RN--RAEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDG-MIWEA 451 (636)
T ss_dssp C--------------HH--HHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHHHHHHHHTTSSCCCCEEEEH-HHHHH
T ss_pred C--------------HH--HHHHHHHHHHHHHHHcCCEEEEEECCCcHHHHHHHHHHHHHHhCCCCCCeEEEeh-HHHHH
Confidence 1 11 23345788999999999999999999999999999999999988776 9999976 99999
Q ss_pred HHHHHHhHHhhhHHHHHHHh-cCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcC
Q 007166 310 LAYTNTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 388 (615)
Q Consensus 310 ~~~~~~~~ewl~~~~~~~~~-~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~ 388 (615)
++++..+.+||++..++.++ .+.+||.+..+. ..++....+.+. .++||||||++|||++|+++++|++|++
T Consensus 452 ~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~------~~~~~~~~~~l~-~~~~~vIiat~gm~~gg~~~~~l~~~~~ 524 (636)
T 2ycb_A 452 NAIHTARPEYLSKDLRDQIFHMGHNPFISDIFH------KVNGMDERREIV-EGEPSIILSTSGMLTGGNSLEYFKWLCE 524 (636)
T ss_dssp HHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEE------EECCHHHHHHHH-HSSSCEEEESCSSSSSHHHHHHHHHHTT
T ss_pred HHHHHHhHHhhCHHHHHHHHhccCCcccCCceE------EeCCHHHHHHhc-cCCCEEEEecCCccCCChHHHHHHHHhC
Confidence 99999999999998876664 567888654331 111110111111 2789999999999999999999999999
Q ss_pred CCCCcEEecCCcchhcc-------------c---CC--CceeeeEEEEee-cccCCCHhhHHHHHHhcC--CCEEEEecc
Q 007166 389 DHNSLLVLENEVDAELA-------------V---LP--FKPISMKVLQCS-FLSGKKLQKVQPLLKILQ--PKLVLFPEE 447 (615)
Q Consensus 389 d~~N~IIl~g~~~~~~~-------------l---~~--~~~v~~~v~~~~-fs~haD~~~l~~~i~~l~--P~~vilvHG 447 (615)
||+|+|||+||+.++.. + +. ..+++|+|..++ ||+|||+++|.+|++.++ |++||+|||
T Consensus 525 ~~~~~vi~sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~~~~~~Pk~vi~vHG 604 (636)
T 2ycb_A 525 DPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLCHG 604 (636)
T ss_dssp CTTSEEEECSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHHSCSSCCSEEEEESS
T ss_pred CCCCEEEEecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHHHhccCCCEEEEECC
Confidence 99999999999877530 0 22 345889999998 999999999999999998 999999999
Q ss_pred Cccccccccc-----CCceeeecCCCcEEEe
Q 007166 448 WRTHVSFSDV-----TSFSVSHYSENETIHI 473 (615)
Q Consensus 448 ~~~~~~~l~~-----~~~~v~~p~~ge~i~l 473 (615)
+...+..+++ .|+++++|++||++++
T Consensus 605 e~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 605 DNYKTLDLASSIYRTYRIETKTPLNLETVRI 635 (636)
T ss_dssp CHHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred CHHHHHHHHHHHHHHcCCcEEeCCCCCEEEe
Confidence 9998877762 4889999999999986
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=100.00 E-value=5e-48 Score=443.19 Aligned_cols=310 Identities=14% Similarity=0.185 Sum_probs=239.4
Q ss_pred CCccccccccchh-----hh------cccCcE-EEEEecCCccccchHHHhhcccC----CCceEEeeHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIF-----IK------LYARKI-LILKTGRSPMGMLGLPFLTRMEG----FSAKIYITEAAARIGQLMME 74 (615)
Q Consensus 11 ~~~~~lldcg~~f-----~~------~~~~~I-aVllSHah~dH~gaLP~L~~~~g----f~g~Iy~T~pT~~l~~lll~ 74 (615)
.+..+|+|||+.. .+ ...++| +|||||+|.||+||||+|.++++ +++|||||++|.++++.++.
T Consensus 23 ~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~l~ 102 (717)
T 2i7x_A 23 DNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTI 102 (717)
T ss_dssp TTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHHHH
Confidence 3678999999742 11 124489 99999999999999999997532 37999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCC-CchH--HHHHHHHhcceeecCCcEEEe-
Q 007166 75 ELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGG-CPCI--AHVKDCISKVQTLRFGEEACY- 150 (615)
Q Consensus 75 D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ly--~dv~~~~~~i~~v~Y~q~~~l- 150 (615)
|.++.+.. .. .+ .++| ++++.++.+++.++|++++.+
T Consensus 103 d~~~~~~~-------------------------------------~~--~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~ 143 (717)
T 2i7x_A 103 DSYASAGV-------------------------------------IG--PYDTNKLDLEDIEISFDHIVPLKYSQLVDLR 143 (717)
T ss_dssp HHHHHTTS-------------------------------------SS--SBTTCCSCHHHHHHHHHTSEEECTTCCEEET
T ss_pred HHHHhhcc-------------------------------------cc--ccccccccHHHHHhhhhceEEecCCCEEEEe
Confidence 98754310 00 00 1456 789999999999999999999
Q ss_pred --CCcEEEEEeccccccceEEEEEEeCCeeEEEecCCCCC-CCCCCCCCC--------CCCCCCCEEEeCCCCCCCCCcc
Q 007166 151 --NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA-SGHAMDFDY--------RAIQGSDLILYSDLSSLDSTED 219 (615)
Q Consensus 151 --~g~l~it~~~AGHiLGsa~~~I~~~~~~IvYtgD~s~~-~~~~~~~d~--------~~l~~~DvLI~es~~t~~~~~~ 219 (615)
.++++|+++++||++||++|.|+.++.+|+||||+... ..+..+.+. ..+.++|+||+|| ||+..
T Consensus 144 ~~~ggi~V~~~~aGHs~Gs~~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~Es--Ty~~~-- 219 (717)
T 2i7x_A 144 SRYDGLTLLAYNAGVCPGGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTL--DRFGS-- 219 (717)
T ss_dssp TTTTTEEEEEEECSSSTTCEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECC--SCCCC--
T ss_pred ecCCCEEEEEECCCCCCCcEEEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcC--CCCCC--
Confidence 36799999999999999999999999999999998764 233333322 2356899999999 77510
Q ss_pred ccCCcccCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHHHHHhcCCeEEEecCChhhHHHHHHHHHHHH-H---hCCC
Q 007166 220 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-E---CSSL 295 (615)
Q Consensus 220 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~GG~VLIP~fa~GR~qELl~~L~~~~-~---~~~l 295 (615)
.++. . +++.+|++.|.+++++||+||||+|++||+|||+++|.++| + ++.+
T Consensus 220 --------~h~~---------------~--~~~~~l~~~i~~~l~~~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~ 274 (717)
T 2i7x_A 220 --------SQPF---------------K--KRSKIFKDTLKKGLSSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAH 274 (717)
T ss_dssp --------SSCH---------------H--HHHHHHHHHHHHHTSTTCEEEEEECTTTHHHHHHHHHHHHHTTC------
T ss_pred --------CCCC---------------H--HHHHHHHHHHHHHHhCCCeEEEEeccchHHHHHHHHHHHhhhhhhccccC
Confidence 1211 1 24456889999999999999999999999999999999998 2 3345
Q ss_pred c-ccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCC--CCCcc-hhhhhcccccccCCcCChhhhhcCCCCEEEEecC
Q 007166 296 K-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD--PLFAH-VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 371 (615)
Q Consensus 296 ~-vpIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~--~pF~~-~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~ 371 (615)
+ +|||++|+++.+++++|+.+.+||++..++.+.... .||.| ..+ .. . +.+.+...++||||+||+
T Consensus 275 ~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~l------~~-~---~~~~l~~~~~p~VI~aSG 344 (717)
T 2i7x_A 275 TQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRI------KI-I---APNELSKYPGSKICFVSE 344 (717)
T ss_dssp -CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTE------EE-C---CGGGGGGCCSCEEEEEES
T ss_pred CCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCccccccC------cc-C---CHHHHhhCCCCEEEEECC
Confidence 4 999999999999999999999999998766444423 47762 211 11 1 123345567899888865
Q ss_pred CCCCcchHHHHHHHHcCCCCCcEEecCCcc
Q 007166 372 WSLRLGPTIHLLRRWSGDHNSLLVLENEVD 401 (615)
Q Consensus 372 gmL~~G~s~~ll~~~~~d~~N~IIl~g~~~ 401 (615)
++|+++++|++|++||+|+|||+||+.
T Consensus 345 ---~gG~~~~~L~~~a~~~~n~VIf~g~~~ 371 (717)
T 2i7x_A 345 ---VGALINEVIIKVGNSEKTTLILTKPSF 371 (717)
T ss_dssp ---CHHHHHHHHHHHSSCTTEEEEECSSCC
T ss_pred ---CCHHHHHHHHHHcCCCcCEEEEEcCCC
Confidence 899999999999999999999987543
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-37 Score=349.10 Aligned_cols=344 Identities=11% Similarity=0.101 Sum_probs=255.4
Q ss_pred CCccccccccchhhh-----------------cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK-----------------LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLM 72 (615)
Q Consensus 11 ~~~~~lldcg~~f~~-----------------~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~ll 72 (615)
.+..+|+|||..|.+ ..+.+| +|||||+|.||+||||+|.+. |++|||||++|.++.+..
T Consensus 30 ~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~--~~~pIy~t~~t~~ll~~~ 107 (555)
T 3zq4_A 30 QDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQ--VNIPVYGGKLAIGLLRNK 107 (555)
T ss_dssp TTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTT--CCCCEEECHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHh--cCceEEECHHHHHHHHHH
Confidence 467889999975432 236889 999999999999999999975 789999999999988776
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCC
Q 007166 73 MEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNG 152 (615)
Q Consensus 73 l~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g 152 (615)
+.+... .. + ..++.+++++++.+ |
T Consensus 108 l~~~~~-----------------------------------------~~-----~---------~~~~~v~~g~~~~i-g 131 (555)
T 3zq4_A 108 LEEHGL-----------------------------------------LR-----Q---------TKLNIIGEDDIVKF-R 131 (555)
T ss_dssp HHHHST-----------------------------------------TT-----T---------CCEEECCTTCCEEE-T
T ss_pred HHHcCc-----------------------------------------cC-----C---------CceEEeCCCCEEEE-C
Confidence 654210 00 0 14578899999999 4
Q ss_pred cEEEEEecccc-ccceEEEEEEeCCeeEEEecCCCCCCCCCC-CCCCCCC-----CCCCEEEeCCCCCCCCCccccCCcc
Q 007166 153 ILIIKAFSSGL-DIGACNWIISGAKGNIAYISGSNFASGHAM-DFDYRAI-----QGSDLILYSDLSSLDSTEDIDQSSF 225 (615)
Q Consensus 153 ~l~it~~~AGH-iLGsa~~~I~~~~~~IvYtgD~s~~~~~~~-~~d~~~l-----~~~DvLI~es~~t~~~~~~~~~~~~ 225 (615)
++++++++++| ++||++|.|+.++.+++||||+........ ..|...+ .++|+||+|| ||+.. +
T Consensus 132 ~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~es--T~~~~----~--- 202 (555)
T 3zq4_A 132 KTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDS--TNSEN----P--- 202 (555)
T ss_dssp TEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEEC--TTTTC----C---
T ss_pred CEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecC--cccCC----C---
Confidence 69999999999 999999999999999999999886532111 2343333 4799999999 77611 0
Q ss_pred cCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHHHHHhc-CCeEEEecCC--hhhHHHHHHHHHHHHHhCCCcccEEEE
Q 007166 226 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKA-GGSVLIPINR--VGVFLQLLEQIAIFMECSSLKIPIYII 302 (615)
Q Consensus 226 ~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~~-GG~VLIP~fa--~GR~qELl~~L~~~~~~~~l~vpIy~~ 302 (615)
+.. ..| .++.+.+.+++++ +|+|+||+|+ +||+||++..+.++ ..|||++
T Consensus 203 ---~~~--------------~se----~~v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a~~~------gr~v~v~ 255 (555)
T 3zq4_A 203 ---EFT--------------MSE----RRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQN------GRKVAVF 255 (555)
T ss_dssp ---SCC--------------CCH----HHHHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHHHTT------TCEEEEE
T ss_pred ---CCC--------------CCH----HHHHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHHHHH------CCEEEEe
Confidence 100 012 2255677778876 9999999999 99999999988754 3699999
Q ss_pred CchHHHHHHHHHHhHHhhhHHHHHHHhcCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHH
Q 007166 303 SSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 382 (615)
Q Consensus 303 s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~l 382 (615)
++...+++++++.+ .|+. .| ...++. . .+.....+++.||++|++ .|....+
T Consensus 256 grs~~~~~~~~~~~-g~l~-----------~p--~~~~v~---------~--~~~~~~~~~~~vii~tgs---qGe~~~~ 307 (555)
T 3zq4_A 256 GRSMESAIEIGQTL-GYIN-----------CP--KNTFIE---------H--NEINRMPANKVTILCTGS---QGEPMAA 307 (555)
T ss_dssp SHHHHHHHHHHHGG-GSCC-----------CC--GGGEEC---------G--GGTTTSCGGGEEEEECCT---TCCTTSH
T ss_pred CHHHHHHHHHHHHc-CCcc-----------CC--cccEeC---------H--HHHhhCCCCCEEEEeCCC---CchHHHH
Confidence 98888888777654 2221 01 111110 0 011122346788888876 6888999
Q ss_pred HHHHcCCCCC--------cEEecCCcchhcc------cCCCceeeeEEEE-----eecccCCCHhhHHHHHHhcCCCEEE
Q 007166 383 LRRWSGDHNS--------LLVLENEVDAELA------VLPFKPISMKVLQ-----CSFLSGKKLQKVQPLLKILQPKLVL 443 (615)
Q Consensus 383 l~~~~~d~~N--------~IIl~g~~~~~~~------l~~~~~v~~~v~~-----~~fs~haD~~~l~~~i~~l~P~~vi 443 (615)
|.+|+.+++| +|||+++..++.. +.......++|.+ +.+|+|||+++|..|++.++|+.+|
T Consensus 308 L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~i 387 (555)
T 3zq4_A 308 LSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFM 387 (555)
T ss_dssp HHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEE
T ss_pred HHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEE
Confidence 9999999888 9999998766422 1112344567754 7899999999999999999999999
Q ss_pred EeccCcccccccc----cCCc---eeeecCCCcEEEeCCC
Q 007166 444 FPEEWRTHVSFSD----VTSF---SVSHYSENETIHIPSL 476 (615)
Q Consensus 444 lvHG~~~~~~~l~----~~~~---~v~~p~~ge~i~l~~~ 476 (615)
.||||...+..++ +.|+ +++.|++|+.+++...
T Consensus 388 pvHGe~~~~~~~~~~a~~~G~~~~~~~~~~nG~~~~l~~~ 427 (555)
T 3zq4_A 388 PIHGEYRMQKMHVKLATDCGIPEENCFIMDNGEVLALKGD 427 (555)
T ss_dssp EESBCHHHHHHHHHHHHHTTCCGGGBCCCCTTCEEEEETT
T ss_pred EcCCCHHHHHHHHHHHHHcCCCcccEEEccCCCEEEEeCC
Confidence 9999988775554 4576 6899999999999654
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=1e-35 Score=334.23 Aligned_cols=347 Identities=12% Similarity=0.076 Sum_probs=242.4
Q ss_pred CCccccccccchhhh-----------------cccCcE-EEEEecCCccccchHHHhhcccCC----CceEEeeHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK-----------------LYARKI-LILKTGRSPMGMLGLPFLTRMEGF----SAKIYITEAAARI 68 (615)
Q Consensus 11 ~~~~~lldcg~~f~~-----------------~~~~~I-aVllSHah~dH~gaLP~L~~~~gf----~g~Iy~T~pT~~l 68 (615)
.+..+|+|||..|.+ ..+.+| +|||||+|.||+|+||+|.+.+ + ++|||||++|.++
T Consensus 38 ~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~-~~~~~~~pIy~~~~t~~~ 116 (562)
T 3bk2_A 38 RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMI-FGKESPVPIYGARLTLGL 116 (562)
T ss_dssp TTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHH-HCSCCCSEEEEEHHHHHH
T ss_pred CCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhh-ccccCCceEEeCHHHHHH
Confidence 357899999964332 226789 9999999999999999999852 2 7999999999998
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEE
Q 007166 69 GQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEA 148 (615)
Q Consensus 69 ~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~ 148 (615)
.+..+.+. +.. + + ...++.+++++++
T Consensus 117 l~~~l~~~------------------------------------------~~~-----~-~------~~~~~~v~~g~~~ 142 (562)
T 3bk2_A 117 LRGKLEEF------------------------------------------GLR-----P-G------AFNLKEISPDDRI 142 (562)
T ss_dssp HHHHHHHT------------------------------------------TCC-----S-T------TSEEEEECTTCEE
T ss_pred HHHHHHHc------------------------------------------CCC-----c-C------CceEEEECCCCEE
Confidence 77655421 000 0 0 1245789999999
Q ss_pred EeCCcEEEEEecccc-ccceEEEEEEeCCeeEEEecCCCCCCCCC--CCCCCCCC-----CCCCEEEeCCCCCCCCCccc
Q 007166 149 CYNGILIIKAFSSGL-DIGACNWIISGAKGNIAYISGSNFASGHA--MDFDYRAI-----QGSDLILYSDLSSLDSTEDI 220 (615)
Q Consensus 149 ~l~g~l~it~~~AGH-iLGsa~~~I~~~~~~IvYtgD~s~~~~~~--~~~d~~~l-----~~~DvLI~es~~t~~~~~~~ 220 (615)
++.+++++++++++| ++||++|.|+.++.+|+||||+....... .+.|...+ .++|+||+|| ||...
T Consensus 143 ~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~Es--T~~~~--- 217 (562)
T 3bk2_A 143 QVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADA--TNAER--- 217 (562)
T ss_dssp EETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEEC--TTTTC---
T ss_pred EeCCCEEEEEEECCCCCcccEEEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecc--cCCCC---
Confidence 996449999999999 89999999999999999999987643211 12232211 4799999999 66511
Q ss_pred cCCcccCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHHHHHh-cCCeEEEecCC--hhhHHHHHHHHHHHHHhCCCcc
Q 007166 221 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVK-AGGSVLIPINR--VGVFLQLLEQIAIFMECSSLKI 297 (615)
Q Consensus 221 ~~~~~~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl~-~GG~VLIP~fa--~GR~qELl~~L~~~~~~~~l~v 297 (615)
+ .+.. .+. .+.+.+.++++ .+|+|++|+|+ +||+||+++.+.++ ..
T Consensus 218 -~-----g~~~---------------~e~----~v~~~l~~~~~~~~grvii~~fas~~~r~q~il~~a~~~------~r 266 (562)
T 3bk2_A 218 -P-----GYTP---------------SEM----EIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKY------GR 266 (562)
T ss_dssp -C-----SCCC---------------CHH----HHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHT------TC
T ss_pred -C-----CCCC---------------hHH----HHHHHHHHHHHhCCCEEEEEEccccchHHHHHHHHHHHh------CC
Confidence 0 1111 111 13345555554 68999999999 99999999988654 25
Q ss_pred cEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcc
Q 007166 298 PIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 377 (615)
Q Consensus 298 pIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G 377 (615)
|||+.+.-..+++++++. .+|++. +++|-. ..+.....++++||+||++| |
T Consensus 267 ~V~v~g~s~~~~~~~~~~-~g~l~~---------~~~~i~----------------~~~~~~~~~~~~vi~~tg~~---g 317 (562)
T 3bk2_A 267 KVAMEGRSMLKFSRIALE-LGYLKV---------KDRLYT----------------LEEVKDLPDHQVLILATGSQ---G 317 (562)
T ss_dssp EEEEECHHHHHHHHHHHH-TTSCCC---------SSCCBC----------------TGGGTTSCGGGEEEEECCTT---S
T ss_pred EEEEEChHHHHHHHHHHh-cCcccC---------CCCccC----------------HHHHhcCCCCCEEEEEcCCC---c
Confidence 888855433467776653 244431 223311 11111122456777777553 4
Q ss_pred hHHHHHHHHcC--------CCCCcEEecCCcchhcc------cCCCceeeeEEE-----EeecccCCCHhhHHHHHHhcC
Q 007166 378 PTIHLLRRWSG--------DHNSLLVLENEVDAELA------VLPFKPISMKVL-----QCSFLSGKKLQKVQPLLKILQ 438 (615)
Q Consensus 378 ~s~~ll~~~~~--------d~~N~IIl~g~~~~~~~------l~~~~~v~~~v~-----~~~fs~haD~~~l~~~i~~l~ 438 (615)
.....+.+|+. +|+|+|||++|..++.. ......+.++|. .+.||+|||+++|..|++.++
T Consensus 318 e~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~ 397 (562)
T 3bk2_A 318 QPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTT 397 (562)
T ss_dssp CSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHC
T ss_pred hhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcC
Confidence 44445777764 89999999999777531 122234456664 457999999999999999999
Q ss_pred CCEEEEeccCcccccccc----cCCc---eeeecCCCcEEEeCCCC
Q 007166 439 PKLVLFPEEWRTHVSFSD----VTSF---SVSHYSENETIHIPSLK 477 (615)
Q Consensus 439 P~~vilvHG~~~~~~~l~----~~~~---~v~~p~~ge~i~l~~~~ 477 (615)
|+++|+|||+...+..++ +.|+ +++.|++|++++++...
T Consensus 398 Pk~vipvHGe~~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~l~~~~ 443 (562)
T 3bk2_A 398 PRFFLPWHGEVRHQMNFKWLAESMSRPPEKTLIGENGAVYRLTRET 443 (562)
T ss_dssp CSEEEEESBCHHHHHHHHHHHHTSSSCCSEECCCCTTEEEEECSSC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHcCCCcceEEECCCCCEEEEeCCC
Confidence 999999999999876654 4576 69999999999998644
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.96 E-value=4e-30 Score=279.93 Aligned_cols=333 Identities=9% Similarity=0.034 Sum_probs=210.5
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
..+| +|||||+|.||+|+||+|.+ +++||+|.+|.++.+.+..+. ..|.
T Consensus 82 ~~~i~~v~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~~~~~~------------------~~~~-------- 131 (429)
T 2az4_A 82 DYQHTAVFLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNSLNRKG------------------DFLI-------- 131 (429)
T ss_dssp CCSEEEEECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHHHTTTS------------------CSSC--------
T ss_pred cccCCEEEECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHHHHHhC------------------cccc--------
Confidence 5689 99999999999999999985 589999999988765422100 0000
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecccc-ccceEEEEEEeCCeeEEEecCC
Q 007166 107 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGH-iLGsa~~~I~~~~~~IvYtgD~ 185 (615)
+. . .+......+++.+++++++.+. +++++++++|| +.||+.+.|+.++.+++||||+
T Consensus 132 ~~----------~----------~~~~~~~~~~~~~~~g~~~~~g-~~~v~~~~~~H~~~gs~~~~i~~~~~~i~~tGD~ 190 (429)
T 2az4_A 132 PS----------P----------FEEKNFTREMIGLNKNDVIKVG-EISVEIVPVDHDAYGASALLIRTPDHFITYTGDL 190 (429)
T ss_dssp CC----------T----------TSCTTCCCCCEEECTTCEEEET-TEEEEEEECCCSSTTCEEEEEEETTEEEEECCSC
T ss_pred cc----------c----------cccccccceEEEeCCCCeEEEC-CEEEEEEECCCCChhhEEEEEEeCCcEEEECCCc
Confidence 00 0 0000112356789999999994 69999999999 8999999999999999999998
Q ss_pred CCCCCCCCCC-CC-CCCCCCCEEEeCCCCCCCCCccccCCcccCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHHHHH
Q 007166 186 NFASGHAMDF-DY-RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSV 263 (615)
Q Consensus 186 s~~~~~~~~~-d~-~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~~tl 263 (615)
........+. .. ...+++|+||+|| ||....+ .+. ..+.. . +. .+ .++.+.+.+++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~d~Li~Es--t~~~~~~-~~~---~~~~~-------~---~~--s~----~~~~~~i~~~~ 248 (429)
T 2az4_A 191 RLHGHNREETLAFCEKAKHTELLMMEG--VSISFPE-REP---DPAQI-------A---VV--SE----EDLVQHLVRLE 248 (429)
T ss_dssp CSSSTTHHHHHHHHHHHTTCSEEEEEC--CGGGSCC-CCC---CTTBC-------C---CC--SH----HHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHhccCCCEEEECC--CCcCccc-ccc---cccCC-------C---CC--CH----HHHHHHHHHHH
Confidence 6532110000 00 0124899999999 6751000 000 00000 0 00 11 12344566666
Q ss_pred hc-CCeEEEecCC---hhhHHHHHHHHHHHHHhCCCcccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCCCcchh
Q 007166 264 KA-GGSVLIPINR---VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 339 (615)
Q Consensus 264 ~~-GG~VLIP~fa---~GR~qELl~~L~~~~~~~~l~vpIy~~s~~a~~~~~~~~~~~ewl~~~~~~~~~~~~~pF~~~~ 339 (615)
++ +|+++||.+. .+|+|+++ .+. +.|||++++++..+++++.....++.. +..-. .
T Consensus 249 ~~~~~rlil~h~~~~~~~r~~~~a-------~~~--gr~v~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~---~ 308 (429)
T 2az4_A 249 LENPNRQITFNGYPANVERFAKII-------EKS--PRTVVLEANMAALLLEVFGIEVRYYYA--------ESGKI---P 308 (429)
T ss_dssp HTCSSSCEEEEECTTCHHHHHHHH-------HHC--SSEEEEEHHHHHHHHHHHCCCCEEECS--------SSSCC---T
T ss_pred HhCCCcEEEEEeccchHHHHHHHH-------HHh--CCEEEEEChhHHHHHhhccccCeeEec--------ccccc---c
Confidence 65 4569999988 78888882 122 369999999988887765211111110 00000 0
Q ss_pred hhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCcEEecCCcchhcc-------cCCCcee
Q 007166 340 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA-------VLPFKPI 412 (615)
Q Consensus 340 l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~d~~N~IIl~g~~~~~~~-------l~~~~~v 412 (615)
.+... ...+.+..+..++++|++ | .|+ +. .+ .++++|||.++..++.. +.....+
T Consensus 309 ~~~~~------~~~~~~~~~~~~~~~ii~----~--~~~--~~--~l--~~~~~vi~s~~~~~g~~~~~~~~~~~~~~~~ 370 (429)
T 2az4_A 309 ELNPA------LEIPYDTLLKDKTDYLWQ----V--VNQ--FD--NL--QEGSLYIHSDAQPLGDFDPQYRVFLDLLAKK 370 (429)
T ss_dssp TSCGG------GBCCHHHHHHCSSSEEEE----C--CSC--GG--GS--CTTCEEEEESCSSCSTTSHHHHHHHHHHHHT
T ss_pred ccCcc------ceecHHHHhhCCCcEEEE----e--cCc--HH--hh--CCCCEEEEeCCCCCcccchHHHHHHHHHHhC
Confidence 00000 011223344556666655 2 444 11 23 34578888876544331 1112356
Q ss_pred eeEEEEeecccCCCHhhHHHHHHhcCCCEEEEeccCcccccccccCCceeeecCCCcEEEe
Q 007166 413 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHI 473 (615)
Q Consensus 413 ~~~v~~~~fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~~~l~~~~~~v~~p~~ge~i~l 473 (615)
.++|..+++|+|||+++|..|++.++|+.+|.|||+...+.. ..+.+++.|++|+++++
T Consensus 371 ~~~v~~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~--~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 371 DITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE--NPYGERILPERGEQIVL 429 (429)
T ss_dssp TCEEEECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC--CTTSEECCCCTTCEEEC
T ss_pred CCEEEEEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh--cCCCcEEEeCCCcEEeC
Confidence 788889999999999999999999999999999999876554 45678999999999874
No 10
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.94 E-value=4.1e-26 Score=242.76 Aligned_cols=298 Identities=10% Similarity=0.082 Sum_probs=191.1
Q ss_pred CccccccccchhhhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 007166 12 HSQSFLHCQMIFIKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAE 90 (615)
Q Consensus 12 ~~~~lldcg~~f~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~ 90 (615)
+.++++||.. + ....+| +|||||+|.||+|+||. +|++|||||.+|.++.+..+
T Consensus 36 G~~ilVD~f~-~--~~~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll~~~l----------------- 90 (367)
T 4b87_A 36 GTGFTVDAFQ-Y--GVVEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLLKNKL----------------- 90 (367)
T ss_dssp TSSEEESCCS-S--SSCTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHHHHHS-----------------
T ss_pred CCeEEEeCCC-c--CCccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHHHHHh-----------------
Confidence 5678888854 2 357899 99999999999999992 57899999999988654211
Q ss_pred CCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccceEEE
Q 007166 91 ESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNW 170 (615)
Q Consensus 91 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLGsa~~ 170 (615)
+.. . ..++.+++++++.+ |+++|+++++||++||++|
T Consensus 91 ----------------------------~~~-----~---------~~~~~l~~g~~~~i-g~~~v~~~~agH~~gs~~~ 127 (367)
T 4b87_A 91 ----------------------------HVQ-----E---------QYIHPLPLDTECIV-NGVKVVLLDANHCPGAVMI 127 (367)
T ss_dssp ----------------------------CCC-----G---------GGEEECCBTSCEEE-TTEEEEEEECSSSTTCEEE
T ss_pred ----------------------------ccc-----c---------ceEEEeCCCCEEEE-CCEEEEEEeCCCcCCcEEE
Confidence 000 0 24578899999999 4699999999999999999
Q ss_pred EEEe-CCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCCchhhhhhccCCCcccHHHH
Q 007166 171 IISG-AKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 249 (615)
Q Consensus 171 ~I~~-~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~ 249 (615)
.|+. ++.+|+||||+........ .+. ...++|+||+|+ ||+. |. -.++. +.
T Consensus 128 ~i~~~~g~~il~tGD~~~~~~~~~-~~l-~~~~~D~Li~Es--Ty~~-----~~---~~~ps----------------~~ 179 (367)
T 4b87_A 128 LFYLPNGTVILHTGDFRADPSMER-SLL-ADQKVHMLYLDT--TYCS-----PE---YTFPS----------------QQ 179 (367)
T ss_dssp EEECTTSCEEEECCSCCCCGGGGG-SGG-GTSCCCEEEECC--TTCS-----TT---CCCCC----------------HH
T ss_pred EEEcCCCcEEEEecCcccCcccch-hhh-ccCCCCEEEEec--ccCC-----CC---CCCCC----------------HH
Confidence 9987 5667999999886532111 111 124799999999 7761 00 01111 12
Q ss_pred HHHHHHHHHHHHHHhcCCeE--EEecCChhhHHHHHHHHHHHHHhCCCcccEEEECchHHHHHHHHHHhHHhhhHHHHHH
Q 007166 250 EKLAFICSCAIDSVKAGGSV--LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 327 (615)
Q Consensus 250 e~l~~l~~~I~~tl~~GG~V--LIP~fa~GR~qELl~~L~~~~~~~~l~vpIy~~s~~a~~~~~~~~~~~ewl~~~~~~~ 327 (615)
+..+++++.+.++++++|++ ++|+|++||+|+++.++.++ +.+|++... -.+++. .+ ++ .....
T Consensus 180 ~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~------g~ki~v~~~-~~~il~---~l-~~--~~~~~- 245 (367)
T 4b87_A 180 EVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVL------GSKVGMSQE-KYKTLQ---CL-NI--PEINS- 245 (367)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHT------TCCEECCHH-HHHHHH---TT-CC--TTHHH-
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHh------CCEEEEeHH-HHHHHH---hc-CC--chhhh-
Confidence 23345677888888878875 58999999999999988764 578886432 222211 10 00 00000
Q ss_pred HhcCCCCCcchhhhhcccccccCCcCChhhhhcCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCcEEe--cCCcchh--
Q 007166 328 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL--ENEVDAE-- 403 (615)
Q Consensus 328 ~~~~~~pF~~~~l~k~~~l~~~~~i~s~~~~~~~~~P~VV~as~gmL~~G~s~~ll~~~~~d~~N~IIl--~g~~~~~-- 403 (615)
++. .+...-.|-+++...++...-..++.+..++-...|-| ||+ ...
T Consensus 246 ~~t----------------------------~d~~~~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptgw-~~~~~ 296 (367)
T 4b87_A 246 LIT----------------------------TDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGW-THSNK 296 (367)
T ss_dssp HEE----------------------------SCGGGCSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC-------
T ss_pred hcc----------------------------cCCccceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCccc-ccCCC
Confidence 100 00111234444434444334444555444443333333 332 111
Q ss_pred -cc---cCCCceeeeEEEEeecccCCCHhhHHHHHHhcCCCEEEEeccC
Q 007166 404 -LA---VLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 448 (615)
Q Consensus 404 -~~---l~~~~~v~~~v~~~~fs~haD~~~l~~~i~~l~P~~vilvHG~ 448 (615)
.. +.|...-++.+..+|+|.|+++.+|.+|++.++|++||-+|+-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~vpySeHss~~EL~~fv~~l~p~~iiptv~~ 345 (367)
T 4b87_A 297 FTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 345 (367)
T ss_dssp ----CCCCCEEETTEEEEEECCCSSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred CCcccccccccCCceEEEEEeccCCCCHHHHHHHHHhcCCCeEECeecC
Confidence 11 1122223567889999999999999999999999999999954
No 11
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.93 E-value=5.5e-26 Score=238.90 Aligned_cols=178 Identities=12% Similarity=0.099 Sum_probs=128.5
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
..+| +|||||+|.||+||||++. ++|||||..|+++.+..+.+
T Consensus 22 ~~~i~ai~lTH~H~DHiggl~~l~-----~~pVy~s~~t~~ll~~~l~~------------------------------- 65 (336)
T 3zdk_A 22 AGTARLFFLSHMHSDHTVGLSSTW-----ARPLYCSPITAHLLHRHLQV------------------------------- 65 (336)
T ss_dssp HCSSCEEECCCCCGGGSTTCSTTC-----CSCEEECHHHHHHHHHHHCC-------------------------------
T ss_pred CCCCCEEEECCChHHHHCchHHHc-----CCCEEecHHHHHHHHHhhhh-------------------------------
Confidence 4689 9999999999999999975 58999999999987643310
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeC------CcEEEEEeccccccceEEEEEEeCCeeEE
Q 007166 107 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN------GILIIKAFSSGLDIGACNWIISGAKGNIA 180 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~------g~l~it~~~AGHiLGsa~~~I~~~~~~Iv 180 (615)
.. ..++.+++++++.+. |+++++++++||++||+++.|+.++.+|+
T Consensus 66 -------------~~---------------~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i~ 117 (336)
T 3zdk_A 66 -------------SK---------------QWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTIL 117 (336)
T ss_dssp -------------CT---------------TTEEECCTTSEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEEE
T ss_pred -------------cc---------------cceEecCCCCeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceEE
Confidence 00 124677788887662 67999999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCEEEeCCCCCCCCCccccCCcccCCCCchhhhhhccCCCcccHHHHHHHHHHHHHHH
Q 007166 181 YISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI 260 (615)
Q Consensus 181 YtgD~s~~~~~~~~~d~~~l~~~DvLI~es~~t~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~e~l~~l~~~I~ 260 (615)
||||+................++|+||+|| ||+.... ..+ .+.+..+++.+.+.
T Consensus 118 ~tGD~~~~~~~~~~~~l~~~~~vD~Li~Ds--T~~~~~~--------~~p----------------se~~v~~~l~~~i~ 171 (336)
T 3zdk_A 118 YTGDFRYTPSMLKEPALTLGKQIHTLYLDN--TNCNPAL--------VLP----------------SRQEAAHQIVQLIR 171 (336)
T ss_dssp ECCSCCCCGGGGGCGGGSSCCCCSEEEECC--TBCCTTC--------CCC----------------CHHHHHHHHHHHHH
T ss_pred EeCCCCCCcccccchhhhccCCccEEEEec--CCCCCCC--------CCC----------------CHHHHHHHHHHHHH
Confidence 999987542211111111356899999999 7761100 011 11222333444454
Q ss_pred HHHhcCCeEEEecCChhhHHHHHHHHHHHHHhCCCcccEEEEC
Q 007166 261 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIIS 303 (615)
Q Consensus 261 ~tl~~GG~VLIP~fa~GR~qELl~~L~~~~~~~~l~vpIy~~s 303 (615)
++ .||+|+||+|++||+|+++.+..++ +.+|++.+
T Consensus 172 ~~--~~g~vii~~f~vgR~q~i~~~a~~~------grkV~v~g 206 (336)
T 3zdk_A 172 KH--PQHNIKIGLYSLGKESLLEQLALEF------QTWVVLSP 206 (336)
T ss_dssp TC--TTSEEEEEECSSSCHHHHHHHHHHH------TCCEECCH
T ss_pred hC--CCCcEEEeecchHHHHHHHHHHHHc------CCEEEEEh
Confidence 43 3789999999999999999988764 36888754
No 12
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.37 E-value=4.4e-13 Score=136.19 Aligned_cols=144 Identities=13% Similarity=0.071 Sum_probs=101.1
Q ss_pred Cccccccccchh---hhcccCcE-EEEEecCCccccchHHHhhc----ccC---CCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIF---IKLYARKI-LILKTGRSPMGMLGLPFLTR----MEG---FSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~f---~~~~~~~I-aVllSHah~dH~gaLP~L~~----~~g---f~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||... ......+| +|||||.|.||+++||.|.. .++ -..+||+++.+. +.+-.+.....+
T Consensus 19 ~~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~- 96 (280)
T 2e7y_A 19 PERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTEFIKRA- 96 (280)
T ss_dssp GGTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHHHHHHH-
T ss_pred CcEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHHHHhhc-
Confidence 567999999643 23447889 99999999999999999952 121 137999999987 443332211100
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCC----cEEE
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNG----ILII 156 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g----~l~i 156 (615)
+.. ..| -.++..++.++++++.+ +++|
T Consensus 97 --------------------------------------~~~-----~~~------~~~~~~~~~g~~~~~g~~~~~~~~v 127 (280)
T 2e7y_A 97 --------------------------------------NPD-----LRF------SFNVHPLKEGERVFLRNAGGFKRYV 127 (280)
T ss_dssp --------------------------------------CGG-----GTT------TEEEEEECTTCCEECCCSSCSCEEE
T ss_pred --------------------------------------ccC-----CCC------ceEEEEcCCCCEEEeCCcccCCEEE
Confidence 000 000 01456788899999864 7999
Q ss_pred EEeccccccc--eEEEEEEe---------------------------------CCeeEEEecCCCCCCCCCCCCCCCCCC
Q 007166 157 KAFSSGLDIG--ACNWIISG---------------------------------AKGNIAYISGSNFASGHAMDFDYRAIQ 201 (615)
Q Consensus 157 t~~~AGHiLG--sa~~~I~~---------------------------------~~~~IvYtgD~s~~~~~~~~~d~~~l~ 201 (615)
+++++||..| +..|.|+. ++++|+|+||.... ......
T Consensus 128 ~~~~~~H~~~~~~~g~~i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~-------~~~~~~ 200 (280)
T 2e7y_A 128 QPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL-------DPEEIR 200 (280)
T ss_dssp EEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC-------CHHHHT
T ss_pred EEEEccCCCCCceEEEEEEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH-------HHHhhc
Confidence 9999999999 99999963 35689999996633 112246
Q ss_pred CCCEEEeCCCCCCC
Q 007166 202 GSDLILYSDLSSLD 215 (615)
Q Consensus 202 ~~DvLI~es~~t~~ 215 (615)
++|+||+|+ ||.
T Consensus 201 ~~d~li~e~--t~~ 212 (280)
T 2e7y_A 201 GTELLIHEC--TFL 212 (280)
T ss_dssp TCSCEEEEC--CBC
T ss_pred CCCEEEEeC--CcC
Confidence 899999998 664
No 13
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.26 E-value=4.3e-12 Score=131.92 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=98.3
Q ss_pred CCccccccccchhhhc------ccCcE-EEEEecCCccccchHHHhhcccCC-----CceEEeeHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIKL------YARKI-LILKTGRSPMGMLGLPFLTRMEGF-----SAKIYITEAAARIGQLMMEELIC 78 (615)
Q Consensus 11 ~~~~~lldcg~~f~~~------~~~~I-aVllSHah~dH~gaLP~L~~~~gf-----~g~Iy~T~pT~~l~~lll~D~~~ 78 (615)
.+..+|+|||...... ...+| +|||||.|.||+|+||.|.+..++ ..+||++..+.++.+-++.
T Consensus 30 ~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---- 105 (320)
T 1y44_A 30 RRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLA---- 105 (320)
T ss_dssp TSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHH----
T ss_pred CCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHH----
Confidence 4568999999754321 25689 999999999999999998764322 4689999999776543321
Q ss_pred HHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEE
Q 007166 79 MNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 158 (615)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~ 158 (615)
... .| .. ++ -++..++-++.+++ ++++|++
T Consensus 106 ~~~--------------~~----------------------~~----~~---------~~~~~~~~g~~~~~-~~~~v~~ 135 (320)
T 1y44_A 106 VTK--------------TH----------------------LT----YP---------LAIQEIEEGIVFED-DQFIVTA 135 (320)
T ss_dssp HTT--------------CC----------------------CS----SC---------EEEEECCSEEEEEC-SSEEEEE
T ss_pred hhc--------------cC----------------------CC----Cc---------eEEEEcCCCceEec-CCEEEEE
Confidence 100 00 00 00 12345555677776 4689999
Q ss_pred eccccccceEEEEEEe--------------------------------------------------CCeeEEEecCCCCC
Q 007166 159 FSSGLDIGACNWIISG--------------------------------------------------AKGNIAYISGSNFA 188 (615)
Q Consensus 159 ~~AGHiLGsa~~~I~~--------------------------------------------------~~~~IvYtgD~s~~ 188 (615)
++++|..++..+.++. ++++|+|+||....
T Consensus 136 ~p~~H~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~ 215 (320)
T 1y44_A 136 VSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVS 215 (320)
T ss_dssp EECBSSSSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBCC
T ss_pred EEccCCCCcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCH
Confidence 9999999988888873 46799999996543
Q ss_pred CCCCCCCCCCCCCCCCEEEeCCCCCCC
Q 007166 189 SGHAMDFDYRAIQGSDLILYSDLSSLD 215 (615)
Q Consensus 189 ~~~~~~~d~~~l~~~DvLI~es~~t~~ 215 (615)
.. + ...++++|+||+|+ ||.
T Consensus 216 ~~----~-~~~~~~~D~li~E~--t~~ 235 (320)
T 1y44_A 216 DK----L-KELARDCDVMVHEA--TFA 235 (320)
T ss_dssp HH----H-HHHTTTCSEEEEEC--CBC
T ss_pred HH----H-HHHhCCCCEEEEec--cCC
Confidence 21 0 01246899999998 775
No 14
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.23 E-value=1.2e-12 Score=132.14 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=99.2
Q ss_pred CCccccccccch-hhh-cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhc
Q 007166 11 RHSQSFLHCQMI-FIK-LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFY 87 (615)
Q Consensus 11 ~~~~~lldcg~~-f~~-~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~ 87 (615)
.+..+|+|||.. +.. ..+.+| +|||||.|.||+++++.|....+...+||+++.+..+. +.+
T Consensus 47 ~~~~iLiD~G~~~~~~~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~-----~~~---------- 111 (258)
T 3g1p_A 47 NDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCD-----DLF---------- 111 (258)
T ss_dssp TTEEEEECCCCTTHHHHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCST-----TTT----------
T ss_pred CCcEEEEECCchHHHhhcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHH-----HHh----------
Confidence 367889999942 222 226789 99999999999999999975444468999998875210 000
Q ss_pred CCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccce
Q 007166 88 GAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA 167 (615)
Q Consensus 88 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLGs 167 (615)
.. +-+ .+....++.++++.+. +++|+++++.|..|+
T Consensus 112 --------------------------------~~-----~~~------~~~~~~~~~g~~~~~g-~~~v~~~~~~H~~~~ 147 (258)
T 3g1p_A 112 --------------------------------KH-----PGL------LDFSHTVEPFVVFDLQ-GLQVTPLPLNHSKLT 147 (258)
T ss_dssp --------------------------------TS-----CTT------EEEEEECCTTCCEEET-TEEEEEEECCSSSCC
T ss_pred --------------------------------cC-----CCc------cccccccCCCCeEEEC-CEEEEEEECCCCCCc
Confidence 00 000 0112467778889984 699999999999999
Q ss_pred EEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCC--CCCCEEEeCCCCCCC
Q 007166 168 CNWIISGAKGNIAYISGSNFASGHAMDFDYRAI--QGSDLILYSDLSSLD 215 (615)
Q Consensus 168 a~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l--~~~DvLI~es~~t~~ 215 (615)
..|.|+.++++++|+||........ ...+ .++|+||+|+ +|.
T Consensus 148 ~g~~i~~~~~~i~~~GDt~~~~~~~----~~~l~~~~~Dlli~e~--t~~ 191 (258)
T 3g1p_A 148 FGYLLETAHSRVAWLSDTAGLPEKT----LKFLRNNQPQVMVMDC--SHP 191 (258)
T ss_dssp EEEEEECSSCEEEEECSCSSCCHHH----HHHHHHTCCSEEEEEC--CBS
T ss_pred eEEEEEeCCcEEEEECCCCCCCHHH----HHHHHhCCCCEEEEeC--CCC
Confidence 9999999999999999965321100 0123 5899999998 664
No 15
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.22 E-value=7.5e-12 Score=129.03 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=47.7
Q ss_pred CCccccccccchhhh------cccCcE-EEEEecCCccccchHHHhhcccC-----CCceEEeeHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK------LYARKI-LILKTGRSPMGMLGLPFLTRMEG-----FSAKIYITEAAARIGQLMM 73 (615)
Q Consensus 11 ~~~~~lldcg~~f~~------~~~~~I-aVllSHah~dH~gaLP~L~~~~g-----f~g~Iy~T~pT~~l~~lll 73 (615)
.+..+|+|||..... ....+| +|||||.|.||+++||.|.+..+ ...+||++..+.++.+.++
T Consensus 32 ~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~ 106 (306)
T 2cbn_A 32 QSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETAL 106 (306)
T ss_dssp CCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHH
T ss_pred CCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHH
Confidence 456899999975422 126789 99999999999999999876322 2458999999987655443
No 16
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.20 E-value=9.2e-12 Score=126.03 Aligned_cols=137 Identities=11% Similarity=0.056 Sum_probs=98.4
Q ss_pred Cccccccccchhhh-----cccCcE-EEEEecCCccccchHHHhhccc---------CCCceEEeeHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIFIK-----LYARKI-LILKTGRSPMGMLGLPFLTRME---------GFSAKIYITEAAARIGQLMMEEL 76 (615)
Q Consensus 12 ~~~~lldcg~~f~~-----~~~~~I-aVllSHah~dH~gaLP~L~~~~---------gf~g~Iy~T~pT~~l~~lll~D~ 76 (615)
+..+|+|||..... ..+.+| +|||||.|.||+|++|.+.+.. +-..+||++..+.+..+-.
T Consensus 52 ~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~---- 127 (268)
T 1zkp_A 52 GFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSL---- 127 (268)
T ss_dssp TEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTT----
T ss_pred CcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhc----
Confidence 56799999964322 136789 9999999999999999887631 1247999998886532100
Q ss_pred HHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEE
Q 007166 77 ICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILII 156 (615)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~i 156 (615)
.| .+ ..++..+.-++++++ |++++
T Consensus 128 -------------------~~----------------------------~~--------~~~~~~~~~g~~~~~-g~~~v 151 (268)
T 1zkp_A 128 -------------------TH----------------------------EP--------HTKGIPYNPEETLQI-GPFSI 151 (268)
T ss_dssp -------------------CB----------------------------TT--------TEEEEECCTTSCEEE-TTEEE
T ss_pred -------------------cc----------------------------CC--------ccceEEecCCCeEEE-CCEEE
Confidence 00 00 013456667788888 56899
Q ss_pred EEeccccccceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCCCCCCC
Q 007166 157 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLD 215 (615)
Q Consensus 157 t~~~AGHiLGsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es~~t~~ 215 (615)
+++++.|..|+..+.|+.++.+++|+||...... .. ..++++|+||+|+ ++.
T Consensus 152 ~~~~~~H~~~~~~~~i~~~~~~i~~~GD~~~~~~---~~--~~~~~~d~li~e~--~~~ 203 (268)
T 1zkp_A 152 SFLKTVHPVTCFAMRITAGNDIVVYSADSSYIPE---FI--PFTKDADLFICEC--NMY 203 (268)
T ss_dssp EEEECCSSSCCEEEEEEETTEEEEECCSCCCCTT---HH--HHHTTCSEEEEEC--CBC
T ss_pred EEEECCCCCCceEEEEEECCeEEEEeCCCCCCHH---HH--HHHcCCCEEEEEC--CCC
Confidence 9999999999999999999999999999654211 00 1135899999998 553
No 17
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.17 E-value=1.3e-11 Score=126.98 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=96.1
Q ss_pred ccccccccchhhhc----ccCcE-EEEEecCCccccchHHHhhccc---CCCceEEeeHHHHHHHHHHHHHHHHHHHhhh
Q 007166 13 SQSFLHCQMIFIKL----YARKI-LILKTGRSPMGMLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYR 84 (615)
Q Consensus 13 ~~~lldcg~~f~~~----~~~~I-aVllSHah~dH~gaLP~L~~~~---gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~ 84 (615)
..+|+|||..+... ...+| +|||||.|.||+++||.|.+.. +...+||++..+.+..+-.+...
T Consensus 78 ~~iLID~G~~~~~~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~-------- 149 (293)
T 3md7_A 78 TVVVIDTGPDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYC-------- 149 (293)
T ss_dssp EEEEECCCTTHHHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGG--------
T ss_pred eEEEEECCccHHHHHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhh--------
Confidence 58999999654332 25789 9999999999999999886421 45789999998876533211100
Q ss_pred hhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCc---EEEEEecc
Q 007166 85 QFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 161 (615)
Q Consensus 85 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~---l~it~~~A 161 (615)
+. .|. +.. +.+ .-.++.++.++++.+.+. ++|+++++
T Consensus 150 --~~-------~~~--------------------~~~---~~~--------~~~~~~l~~g~~~~~g~~~~~~~v~~~~~ 189 (293)
T 3md7_A 150 --FE-------TPV--------------------GSS---YPP--------ILSMHDIAPETPFSIEGAGGAIRFEPFSQ 189 (293)
T ss_dssp --TS-------CCT--------------------TCC---CCC--------CEEEEECCTTCCEEECCTTCCEEEEEEEE
T ss_pred --hc-------ccc--------------------ccC---CCC--------ceEEEEcCCCCcEEECCCCCcEEEEEEEe
Confidence 00 000 000 000 013567777899998532 99999999
Q ss_pred ccc-cceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCC
Q 007166 162 GLD-IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210 (615)
Q Consensus 162 GHi-LGsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es 210 (615)
.|. .++..|.|+ +++|+||........ ...+.++|+||+|+
T Consensus 190 ~H~~~~~~g~~i~----~~~y~gDt~~~~~~~----~~~~~~~Dlli~e~ 231 (293)
T 3md7_A 190 VHGDIESLGFRIG----SVVYCTDVSAFPEQS----LQYIKDADVLIIGA 231 (293)
T ss_dssp EETTEEEEEEEET----TEEEECSCSBCCGGG----HHHHTTCSEEEEEC
T ss_pred cCCCCCEEEEEEe----EEEEECCCCCCCHHH----HHHhcCCCEEEEeC
Confidence 998 799999997 899999965321100 01246899999998
No 18
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.09 E-value=2.9e-10 Score=115.22 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=76.6
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
+.+| +|++||.|.||+|+++.+ .+.+||+++.+.+...-.... ..
T Consensus 101 ~~~i~~VilTH~H~DH~gg~~~~-----~~~~v~~~~~~~~~~~~~~~~----~~------------------------- 146 (276)
T 2r2d_A 101 PDDISTVVLSHLHNDHAGCVEYF-----GKSRLIAHEDEFATAVRYFAT----GD------------------------- 146 (276)
T ss_dssp GGGCSEEECSCCSTTTSTTGGGC-----SSSEEEEEHHHHHHHHHHHHT----TC-------------------------
T ss_pred HHHCCEEEecCcccccCCChhhC-----CCCEEEECHHHHHHHhccccc----cc-------------------------
Confidence 4589 999999999999999987 358999999887643211100 00
Q ss_pred hhhhhhhhccCCCCCCCCCCchH-HHHHHH---Hhcceeec-CCcEEEeCCcEEEEEe-ccccccceEEEEEEeCC-eeE
Q 007166 107 PSALRKIALGEDGSELGGGCPCI-AHVKDC---ISKVQTLR-FGEEACYNGILIIKAF-SSGLDIGACNWIISGAK-GNI 179 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly-~dv~~~---~~~i~~v~-Y~q~~~l~g~l~it~~-~AGHiLGsa~~~I~~~~-~~I 179 (615)
.. ...+ .+++.. -.++..++ +++.+++.+++++.+. + ||..|+..+.++.++ +++
T Consensus 147 ------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~g~~~~~~~~~~~~~v 208 (276)
T 2r2d_A 147 ------------HS-----SPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHASGMLGLAVRLEKQPGF 208 (276)
T ss_dssp ------------CS-----SSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSSSEEEEEEECSSSCEE
T ss_pred ------------cc-----cccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCceeEEEEEEcCCCceE
Confidence 00 0111 233321 12456676 6889999756999999 6 999999999999877 899
Q ss_pred EEecCCCC
Q 007166 180 AYISGSNF 187 (615)
Q Consensus 180 vYtgD~s~ 187 (615)
+|+||...
T Consensus 209 l~~GD~~~ 216 (276)
T 2r2d_A 209 LLVSDACY 216 (276)
T ss_dssp EEEETTSC
T ss_pred EEEechhh
Confidence 99999653
No 19
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.07 E-value=5.7e-11 Score=123.97 Aligned_cols=142 Identities=12% Similarity=0.059 Sum_probs=95.2
Q ss_pred Ccc-ccccccchhhhc-------------ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHH
Q 007166 12 HSQ-SFLHCQMIFIKL-------------YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL 76 (615)
Q Consensus 12 ~~~-~lldcg~~f~~~-------------~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~ 76 (615)
+.+ +|+|||..+... ...+| +|||||+|.||+++||+|.+ +...+||++..|.+..+-.+. .
T Consensus 50 ~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~--~~~~~vy~~~~~~~~l~~~~~-~ 126 (321)
T 3jxp_A 50 GVHWILCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLRE--GCPHQVWCTDMVHQDLTTGFP-L 126 (321)
T ss_dssp SSSEEEECCCTTHHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGG--GCCEEEEECHHHHHHTTTTSC-H
T ss_pred CceEEEEeCCchHHHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHh--cCCCeEEECHHHHHHHHhhCc-c
Confidence 455 999999754321 25789 99999999999999999965 467899999998654331110 0
Q ss_pred HHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEe--CCcE
Q 007166 77 ICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY--NGIL 154 (615)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l--~g~l 154 (615)
..... .. .+ . -.+..+.-++++.+ .+++
T Consensus 127 f~~~~--------------------------------------~~----~~---~-----i~~~~i~~g~~~~i~~~~~~ 156 (321)
T 3jxp_A 127 FNMLS--------------------------------------HW----NG---G-----LQWNRIELEGSFVIDACPNL 156 (321)
T ss_dssp HHHHT--------------------------------------TT----TT---C-----EEEEECCSSSCEECTTSTTE
T ss_pred ccccc--------------------------------------cc----cC---c-----eeEEEcCCCCeEEeccCCCe
Confidence 00000 00 00 0 02356666788888 2469
Q ss_pred EEEEeccc--------cc-----cceEEEEEE--eCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCC
Q 007166 155 IIKAFSSG--------LD-----IGACNWIIS--GAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210 (615)
Q Consensus 155 ~it~~~AG--------Hi-----LGsa~~~I~--~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es 210 (615)
+|++++.- |- ..+..+.|+ .++++++|+||....+... ...++++|+||+|+
T Consensus 157 ~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~~----~~~~~~~D~li~ea 223 (321)
T 3jxp_A 157 KFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKL----LAMMHGADCLLVDG 223 (321)
T ss_dssp EEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHHH----HHHHHHCSEEEEEC
T ss_pred EEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCHHH----HHHhcCCCEEEEeC
Confidence 99999986 65 467889999 7899999999954211000 01245799999998
No 20
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.00 E-value=3.5e-10 Score=115.26 Aligned_cols=110 Identities=12% Similarity=-0.056 Sum_probs=71.9
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 105 (615)
+.+| +||+||.|.||+|++++|.+...| +++||+++.+.+... + +... ...
T Consensus 98 ~~~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~~~~~~~----~-------------~~~~------~~~---- 150 (280)
T 3esh_A 98 PKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFI----A-------------PNIR------SKS---- 150 (280)
T ss_dssp TTSCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHHHHHHHH----S-------------CCTT------GGG----
T ss_pred HHHCCEEEeCCCcccccCcccccccccCCCCCEEEECHHHHHHhh----C-------------cccc------ccc----
Confidence 5689 999999999999999999873347 799999998765321 0 0000 000
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccceEEEEEEeCCeeEEEecCC
Q 007166 106 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLGsa~~~I~~~~~~IvYtgD~ 185 (615)
.. |. ..+.....++..+ .+...+.+++++. ...||..|++.+.++.++++++|+||.
T Consensus 151 -------------~~----~~---~~~~~~~~~~~~~--~~~~~l~~gi~~~-~~pGHt~g~~~~~i~~~~~~vlftGD~ 207 (280)
T 3esh_A 151 -------------TY----WD---KNKGDYSNKLILF--EKHFEPVPGIKMQ-HSGGHSFGHTIITIESQGDKAVHMGDI 207 (280)
T ss_dssp -------------TS----CG---GGCCGGGGGEEEE--SSEECSSTTEEEE-ECCSSSTTCEEEEEEETTEEEEECGGG
T ss_pred -------------ch----hh---hhhhhhhheEEEe--CCCCeEcCCEEEE-EcCCCCcccEEEEEEECCcEEEEEEcc
Confidence 00 00 0000011233333 4445555567774 447999999999999999999999996
Q ss_pred CC
Q 007166 186 NF 187 (615)
Q Consensus 186 s~ 187 (615)
..
T Consensus 208 ~~ 209 (280)
T 3esh_A 208 FP 209 (280)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 21
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.00 E-value=7.9e-10 Score=117.48 Aligned_cols=63 Identities=21% Similarity=0.100 Sum_probs=48.2
Q ss_pred CCccccccccchhhh------cccCcE-EEEEecCCccccchHHHhhcccCC---------CceEEeeHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIFIK------LYARKI-LILKTGRSPMGMLGLPFLTRMEGF---------SAKIYITEAAARIGQLMM 73 (615)
Q Consensus 11 ~~~~~lldcg~~f~~------~~~~~I-aVllSHah~dH~gaLP~L~~~~gf---------~g~Iy~T~pT~~l~~lll 73 (615)
.+..+|+|||..... ....+| +|||||.|.||+++||.|....++ ..+||+...+.+..+.++
T Consensus 27 ~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l 105 (368)
T 3zwf_A 27 EGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTM 105 (368)
T ss_dssp TTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHH
T ss_pred CCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHH
Confidence 367889999964322 225689 999999999999999988764333 458999999988766544
No 22
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=98.93 E-value=1.9e-09 Score=108.17 Aligned_cols=128 Identities=13% Similarity=0.021 Sum_probs=82.6
Q ss_pred CCccccccccchhh----hcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHH------HHHHHHHH
Q 007166 11 RHSQSFLHCQMIFI----KLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQL------MMEELICM 79 (615)
Q Consensus 11 ~~~~~lldcg~~f~----~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~l------ll~D~~~~ 79 (615)
.+..+|+|||.... +. ..+| +|++||+|.||+|+++++.+. |..+||+++.+.+...- ++....+.
T Consensus 28 ~~~~iLiD~G~~~~~~~l~~-~~~i~~vi~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~ 104 (261)
T 3adr_A 28 EKLTVMIDAGVSNSIADFSF-LDKLDYIVLTHLHIDHIGLLPELLQV--YKAKVLVKSGFKKYLTSEDGLKKLNESAEKV 104 (261)
T ss_dssp SSCEEEECCCCTTCCCCCTT-CSCCCEEECSCCSGGGTTTHHHHHHH--SCCEEEEETTCTHHHHSHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCChhhcCC-CCCCcEEEECCCCccccCCHHHHHHH--hCCeEEECHHHHHHhcCchhHHHHHHHHHHH
Confidence 36779999996421 23 6789 999999999999999999986 47899999988764431 11111000
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
. . .+...+. . ...+ .+ ..++..++-++.+.+. +++++++
T Consensus 105 ~-----------------~------~~~~~~~-----~-~~~~---~~--------~~~~~~~~~g~~~~~g-~~~i~~~ 143 (261)
T 3adr_A 105 L-----------------G------DLYYVYG-----G-LEKK---LD--------QDKVIEVEGNEEFDLG-GYRMRLI 143 (261)
T ss_dssp H-----------------T------HHHHHHC-----C-CCSC---CC--------GGGEEEECSCCEEECS-SSEEEEE
T ss_pred H-----------------H------HHHHHhc-----c-cccC---CC--------ccceEecCCCCEEEEC-CEEEEEE
Confidence 0 0 0000000 0 0000 00 0235677888899885 5788877
Q ss_pred c-cccccceEEEEEEeCCeeEEEecCCC
Q 007166 160 S-SGLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 160 ~-AGHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
+ .||..|+..+.+ ++++|+||..
T Consensus 144 ~~pGHt~~~~~~~~----~~~lf~GD~~ 167 (261)
T 3adr_A 144 YTPGHARHHMSVLV----DDFLFTGDSA 167 (261)
T ss_dssp ECTTSCTTCEEEEE----TTEEEEETSS
T ss_pred ECCCCCCccEEEEE----CCEEEEcCcc
Confidence 6 589999998864 4899999954
No 23
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=98.87 E-value=8.2e-09 Score=102.67 Aligned_cols=125 Identities=11% Similarity=0.073 Sum_probs=89.0
Q ss_pred CCccccccccchhhhc-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 007166 11 RHSQSFLHCQMIFIKL-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYG 88 (615)
Q Consensus 11 ~~~~~lldcg~~f~~~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~ 88 (615)
.+.++|+|||...... ...+| +||+||.|.||++ ++.+.+......+||++..+.+..+
T Consensus 45 ~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~~-~~~l~~~~~~~~~v~~~~~~~~~l~------------------ 105 (235)
T 3kl7_A 45 DNHSIQVDPVSEYADYTTFPKADIILITHEHGDHLD-PKAIQAVEKSDTEIIANENSQKKLG------------------ 105 (235)
T ss_dssp TTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTCC-HHHHHHHCCTTCEEEECHHHHHHHT------------------
T ss_pred CCEEEEECCCCCccchhhCCCCCEEEECCCccccCC-HHHHHHhhcCCCEEEEcHHHHHHhc------------------
Confidence 4678999999643221 25689 9999999999995 5555542245789999987754320
Q ss_pred CCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCc-EEEeCCcEEEEEeccccccc-
Q 007166 89 AEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGE-EACYNGILIIKAFSSGLDIG- 166 (615)
Q Consensus 89 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q-~~~l~g~l~it~~~AGHiLG- 166 (615)
++..++.++ ++++ |+++|+++++-|..+
T Consensus 106 -------------------------------------------------~~~~l~~g~~~~~~-g~~~i~~~p~~H~~~~ 135 (235)
T 3kl7_A 106 -------------------------------------------------KGKVLKNGDTDTSI-SYMKIEAVPAYNTTPG 135 (235)
T ss_dssp -------------------------------------------------CSEECCTTCEECCS-TTCEEEEEECCCCSTT
T ss_pred -------------------------------------------------CcEEecCCCEEEEE-CCEEEEEEEeecCCCc
Confidence 113445566 6676 468999999877653
Q ss_pred ---------eEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCC
Q 007166 167 ---------ACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210 (615)
Q Consensus 167 ---------sa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es 210 (615)
++.|.|+.++.+++|+||..... +...+.++|+++++.
T Consensus 136 ~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~------~~~~l~~~Dv~il~~ 182 (235)
T 3kl7_A 136 RDKYHPRHRDNGYILTFDGLRVYIAGDTEDIP------EMKDLKDIDIAFLPV 182 (235)
T ss_dssp GGGTSCTTTSEEEEEEETTEEEEECCSCCSCG------GGGGCCSCSEEEEEC
T ss_pred cccccCCCCceEEEEEeCCeEEEEECCCCchh------hHHhhcCCCEEEECC
Confidence 47899999999999999966432 122356899999986
No 24
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=98.86 E-value=3.6e-09 Score=108.03 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=84.8
Q ss_pred Cccccccccch--------hhhcc---cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI--------FIKLY---ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~--------f~~~~---~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. ++... +.+| +||+||.|.||+|+++++.+. +..+||++..+.++.+-...
T Consensus 64 ~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~----- 136 (294)
T 3m8t_A 64 QGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE--TGAQLVAGERDKPLLEGGYY----- 136 (294)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH--HCCEEEEEGGGHHHHHHTCB-----
T ss_pred CceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc--cCCEEEEChHHHHHHhcccc-----
Confidence 56889999963 11111 4579 999999999999999999875 56899999998765331100
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
++.... . ... +.+ ......+.-++.+.+. +++++++
T Consensus 137 -------~~~~~~---~----------------------~~~---~~~--------~~~~~~~~~g~~~~~g-~~~i~~~ 172 (294)
T 3m8t_A 137 -------PGDEKN---E----------------------DLA---FPA--------VKVDRAVKEGDRVTLG-DTTLTAH 172 (294)
T ss_dssp -------TTBTTC---G----------------------GGC---CCC--------CCCSEEECTTCEEEET-TEEEEEE
T ss_pred -------cCcccc---c----------------------cCC---CCC--------CCCceEeCCCCEEEeC-CEEEEEE
Confidence 000000 0 000 000 0123567889999985 5788887
Q ss_pred c-cccccceEEEEEEeCCe----eEEEecCCC
Q 007166 160 S-SGLDIGACNWIISGAKG----NIAYISGSN 186 (615)
Q Consensus 160 ~-AGHiLGsa~~~I~~~~~----~IvYtgD~s 186 (615)
. .||..|++.+.++.++. +++|+||..
T Consensus 173 ~~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~ 204 (294)
T 3m8t_A 173 ATPGHSPGCTSWEMTVKDGKEDREVLFFCSGT 204 (294)
T ss_dssp ECCSSSTTCEEEEEEEEETTEEEEEEECCCCC
T ss_pred eCCCCCccCEEEEEEccCCCccceEEEEcCcc
Confidence 6 78999999999986544 899999954
No 25
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=98.85 E-value=9.1e-09 Score=103.59 Aligned_cols=126 Identities=11% Similarity=0.071 Sum_probs=83.2
Q ss_pred Cccccccccch--------hhhcc---cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI--------FIKLY---ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~--------f~~~~---~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. .+... +.+| +||+||.|.||+|+++.+.+. +..+||+++.+.+..+-..
T Consensus 34 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~------ 105 (263)
T 1k07_A 34 RGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQ--TKAKYMVMDEDVSVILSGG------ 105 (263)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHH--HCCEEEEEHHHHHHHHTTT------
T ss_pred CceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHh--cCCEEEEcHHHHHHHhccc------
Confidence 56789999963 12211 4579 999999999999999999875 4689999999876532100
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
... ..|. ..+. .. +.+ ......+.-++.+.+. +++++++
T Consensus 106 ----------~~~--~~~~---------~~~~--------~~---~~~--------~~~~~~~~~g~~~~~g-~~~i~~i 144 (263)
T 1k07_A 106 ----------KSD--FHYA---------NDSS--------TY---FTQ--------STVDKVLHDGERVELG-GTVLTAH 144 (263)
T ss_dssp ----------TTC--TTTT---------TCGG--------GC---CCC--------CCCSEEECTTCEEEET-TEEEEEE
T ss_pred ----------ccc--cccC---------cccc--------cc---CCC--------CCcceEeCCCCEEEEC-CeEEEEE
Confidence 000 0000 0000 00 000 0134567788899984 5677776
Q ss_pred c-cccccceEEEEEEeC--C--eeEEEecCCC
Q 007166 160 S-SGLDIGACNWIISGA--K--GNIAYISGSN 186 (615)
Q Consensus 160 ~-AGHiLGsa~~~I~~~--~--~~IvYtgD~s 186 (615)
. .||..|+..+.++.. + .+++|+||..
T Consensus 145 ~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~ 176 (263)
T 1k07_A 145 LTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIG 176 (263)
T ss_dssp ECCSSSTTCEEEEEEEEETTEEEEEEEECCCC
T ss_pred ECCCCCCCcEEEEEecccCCceeEEEEECCcc
Confidence 5 499999999999874 4 4899999954
No 26
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=98.85 E-value=3.1e-09 Score=103.15 Aligned_cols=122 Identities=9% Similarity=0.053 Sum_probs=80.6
Q ss_pred Cccccccccchh------hhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhh
Q 007166 12 HSQSFLHCQMIF------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYR 84 (615)
Q Consensus 12 ~~~~lldcg~~f------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~ 84 (615)
+..+|+|||... ++....+| +|++||+|.||+|+++.+.+. |..+||+++.+.+...-.+.... ..
T Consensus 24 ~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~---~~-- 96 (210)
T 2xf4_A 24 RLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQH--YGVPVIGPEKEDEFWLQGLPAQS---RM-- 96 (210)
T ss_dssp CEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHH--HTCCEECCCGGGHHHHHTHHHHH---HH--
T ss_pred CcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHH--cCCcEEEecchHHHHhccchhhh---hh--
Confidence 567999999532 11212469 999999999999999999875 45899999988664322111110 00
Q ss_pred hhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec-ccc
Q 007166 85 QFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGL 163 (615)
Q Consensus 85 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~-AGH 163 (615)
+|.. ... + ......++-++++.+. +.+++++. .||
T Consensus 97 --~~~~----------------------------~~~-----~--------~~~~~~~~~g~~~~~g-~~~i~~~~~pgH 132 (210)
T 2xf4_A 97 --FGLD----------------------------ECQ-----P--------LTPDRWLNDGDRVSVG-NVTLQVLHCPGH 132 (210)
T ss_dssp --TTCC----------------------------CCC-----C--------CCCSBCCCTTCEEEET-TEEEEEEECCSS
T ss_pred --cCCc----------------------------ccC-----C--------CCCceEECCCCEEEEC-CeEEEEEECCCC
Confidence 1100 000 0 0112456678888884 56777764 599
Q ss_pred ccceEEEEEEeCCeeEEEecCCC
Q 007166 164 DIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 164 iLGsa~~~I~~~~~~IvYtgD~s 186 (615)
..|+..+.++ +.+++|+||..
T Consensus 133 t~g~~~~~~~--~~~~lf~GD~~ 153 (210)
T 2xf4_A 133 TPGHVVFFDE--QSQLLISGDVI 153 (210)
T ss_dssp STTCEEEEET--TTTEEEEETSE
T ss_pred CCCcEEEEeC--CCCEEEECCEe
Confidence 9999998874 67899999954
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.84 E-value=7.9e-09 Score=100.83 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=80.2
Q ss_pred CCccccccccchh---------hhc-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIF---------IKL-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 11 ~~~~~lldcg~~f---------~~~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
.+..+|+|||... .+. ...+| +|++||+|.||+|+++++.+ +..+||+++.+.+..+
T Consensus 39 ~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~--------- 106 (219)
T 3l6n_A 39 KKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN---KGIKTYATAKTNEFLK--------- 106 (219)
T ss_dssp TTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH---TTCEEEECHHHHHHHH---------
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh---CCCEEEEcHHHHHHHH---------
Confidence 3678899999532 111 14689 99999999999999999985 4789999998865322
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
.. +.. .....++-++++.+. +++++++
T Consensus 107 -~~------------------------------------~~~---------------~~~~~~~~g~~~~~g-~~~i~~~ 133 (219)
T 3l6n_A 107 -KD------------------------------------GKA---------------TSTEIIKTGKPYRIG-GEEFVVD 133 (219)
T ss_dssp -HT------------------------------------TCC---------------CCSEECCTTSEEEET-TEEEEEE
T ss_pred -hc------------------------------------CCC---------------CCcEecCCCCEEEEC-CEEEEEE
Confidence 00 000 012456678888884 5788887
Q ss_pred c--cccccceEEEEEEeCCeeEEEecCCC
Q 007166 160 S--SGLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 160 ~--AGHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
. .||..|+..+.+. +.+++|+||..
T Consensus 134 ~~~pgHt~g~~~~~~~--~~~~lf~GD~~ 160 (219)
T 3l6n_A 134 FLGEGHTADNVVVWFP--KYNVLDGGCLV 160 (219)
T ss_dssp CCCCSSSSSCCEEEET--TTTEEEEETTS
T ss_pred eCCCCCCCCCEEEEEC--CCCEEEECCee
Confidence 5 7999999999875 56899999954
No 28
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=98.82 E-value=1.7e-09 Score=106.40 Aligned_cols=120 Identities=9% Similarity=0.050 Sum_probs=79.7
Q ss_pred Cccccccccch-----h---hhc---ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-----F---IKL---YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~-----f---~~~---~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. + +.. .+.+| +||+||+|.||+|+++++. +.+||+++. .+.+.+
T Consensus 44 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~-----~~~v~~~~~-------~~~~~~-- 109 (221)
T 1ztc_A 44 DRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFE-----NATFYVHEV-------YKTKNY-- 109 (221)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT-----TCEEEEEGG-------GGGSCG--
T ss_pred CeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCC-----CCEEEEeHH-------Hhhhhh--
Confidence 56789999962 1 111 25689 9999999999999999875 479999987 111100
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
+ .|.... ..+|..+.....++..++-++.+. .+.+++.+.
T Consensus 110 -~--------------~~~~~~------------------------~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~v~~~ 149 (221)
T 1ztc_A 110 -L--------------SFGTIV------------------------GRIYSKVISSWKNVVLLKGEESLF-DEKVKVFHT 149 (221)
T ss_dssp -G--------------GGCHHH------------------------HHHHHHHHHTCCSEEEECSCCEET-TTTEEEEEC
T ss_pred -h--------------hhccch------------------------hhhhhhccccccceEEeCCCCEEE-CCeEEEEEc
Confidence 0 000000 011222221123456777777764 237899888
Q ss_pred ccccccceEEEEEEeCC-eeEEEecCCC
Q 007166 160 SSGLDIGACNWIISGAK-GNIAYISGSN 186 (615)
Q Consensus 160 ~AGHiLGsa~~~I~~~~-~~IvYtgD~s 186 (615)
+ ||..|+..+.++.++ .+++|+||..
T Consensus 150 p-GHt~g~~~~~~~~~~~~~vlftGD~~ 176 (221)
T 1ztc_A 150 P-WHAREHLSFLLDTENAGRVLITGDIT 176 (221)
T ss_dssp C-SSSTTCEEEEEEETTTEEEEECGGGS
T ss_pred C-CCCcccEEEEEEcCCCCeEEEEeCcc
Confidence 7 999999999999876 7999999954
No 29
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=98.76 E-value=5.6e-09 Score=104.40 Aligned_cols=99 Identities=14% Similarity=0.125 Sum_probs=65.8
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
+.+| +|++||+|.||+|+++++. +.+||+++.+.+.... ... + ...
T Consensus 98 ~~~I~~VilTH~H~DH~gg~~~~~-----~~~i~~~~~~~~~~~~--------~~~----~----------~~~------ 144 (254)
T 3dha_A 98 PDDLLYIISSHLHFDHAGGNGAFT-----NTPIIVQRTEYEAALH--------REE----Y----------MKE------ 144 (254)
T ss_dssp GGGCSEEECSCCSHHHHTTGGGCS-----SSCEEEEHHHHHHHHH--------CTT----S----------CGG------
T ss_pred HHHCCEEEcCCChhhcCCChHHCC-----CCEEEECHHHHHHhhc--------ccc----c----------ccc------
Confidence 5569 9999999999999999874 4799999988764321 000 0 000
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccceEEEEEEeC-CeeEEEecCC
Q 007166 107 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA-KGNIAYISGS 185 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLGsa~~~I~~~-~~~IvYtgD~ 185 (615)
... +. ..+..+. ++...+ +++++...+ ||..|++.+.++.+ +.+++|+||.
T Consensus 145 ------------~~~-----~~--------~~~~~~~-~~~~~~-~~i~~~~~p-GHt~g~~~~~~~~~~~~~vl~~GD~ 196 (254)
T 3dha_A 145 ------------CIL-----PH--------LNYKIIE-GDYEVV-PGVQLLYTP-GHSPGHQSLFIETEQSGSVLLTIDA 196 (254)
T ss_dssp ------------GSC-----TT--------SCEEEEC-SSEEEE-TTEEEEECC-SSSTTCEEEEEEETTTEEEEEEETT
T ss_pred ------------ccC-----cc--------cceEEec-CCcccc-CCEEEEECC-CCCCCCEEEEEEeCCCCEEEEEecc
Confidence 000 00 0112222 344444 457887766 99999999999886 6799999996
Q ss_pred CC
Q 007166 186 NF 187 (615)
Q Consensus 186 s~ 187 (615)
..
T Consensus 197 ~~ 198 (254)
T 3dha_A 197 SY 198 (254)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 30
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.75 E-value=3.2e-08 Score=98.28 Aligned_cols=134 Identities=11% Similarity=0.094 Sum_probs=80.4
Q ss_pred ccccccccchh---------hhcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHH
Q 007166 13 SQSFLHCQMIF---------IKLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNM 81 (615)
Q Consensus 13 ~~~lldcg~~f---------~~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~ 81 (615)
..+|+|||... +... .... +|++||+|.||+|+++++.+ +..+||+++.+.++.+-..........
T Consensus 41 ~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~ 117 (246)
T 2fhx_A 41 TVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK---MGAETWSSDLTKQLRLEENKKDRIKAA 117 (246)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhh---cCCEEEEcHHHHHHHHhcchhhhHHHH
Confidence 46899999621 1111 2344 88999999999999999975 468999999998865533322111000
Q ss_pred hhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe--
Q 007166 82 EYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF-- 159 (615)
Q Consensus 82 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~-- 159 (615)
+ .+. . ..+ +..+.. ... .+ -..+..++-++.+++. +.+++++
T Consensus 118 ~---~~~----------~-~~~---~~~~~~------~~~----~~--------~~~~~~~~~g~~l~~g-~~~i~~~~~ 161 (246)
T 2fhx_A 118 E---FYK----------N-EDL---KRRILS------SHP----VP--------ADNVFDLKQGKVFSFS-NELVEVSFP 161 (246)
T ss_dssp H---HCC----------C-HHH---HHHHHH------TCC----CC--------CSEEECTTTCEEEEET-TEEEEEECC
T ss_pred h---hhc----------c-ccc---hhhhcc------ccc----CC--------CCceeecCCCCEEEEC-CEEEEEEeC
Confidence 0 000 0 000 000000 000 00 0122345667788884 5678876
Q ss_pred ccccccceEEEEEEeCCeeEEEecCCCC
Q 007166 160 SSGLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 160 ~AGHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
..||..|+..+.+. +.+++|+||...
T Consensus 162 ~pGHt~g~~~~~~~--~~~~lf~GD~~~ 187 (246)
T 2fhx_A 162 GPAHSPDNVVVYFP--KKKLLFGGCMIK 187 (246)
T ss_dssp CCSSSTTCCEEEET--TTTEEEEETTCC
T ss_pred CCCCCCCCEEEEEc--CCCEEEECCEec
Confidence 37999999988874 578999999553
No 31
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.75 E-value=1.9e-08 Score=107.52 Aligned_cols=111 Identities=12% Similarity=0.058 Sum_probs=80.0
Q ss_pred Cccccccccch-h-------hhcc--cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-F-------IKLY--ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~-f-------~~~~--~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||.. + +... ..+| +|++||.|.||+|+++++.+.+. ..+||+++.+.++.+- ..
T Consensus 43 ~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~~~~~----~~--- 114 (402)
T 1e5d_A 43 EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQ-PEKIFTSSLGQKAMES----HF--- 114 (402)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHC-CSEEEEEHHHHHHHHH----HH---
T ss_pred CCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCC-CCEEEEChHHHHHHHH----Hh---
Confidence 45789999964 1 1122 5789 99999999999999999987621 5899999999765331 11
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~ 160 (615)
+ .. -..+..++-++.+.+. ++++++++
T Consensus 115 -------~-------------------------------~~--------------~~~~~~~~~g~~~~~g-~~~~~~~~ 141 (402)
T 1e5d_A 115 -------H-------------------------------YK--------------DWPVQVVKHGETLSLG-KRTVTFYE 141 (402)
T ss_dssp -------C-------------------------------CS--------------SCCEEEECTTCEEECS-SCEEEEEE
T ss_pred -------C-------------------------------CC--------------CCceEEcCCCCEEEEC-CCEEEEEe
Confidence 0 00 0123567778888885 45666665
Q ss_pred c--ccccceEEEEEEeCCeeEEEecCC
Q 007166 161 S--GLDIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 161 A--GHiLGsa~~~I~~~~~~IvYtgD~ 185 (615)
+ ||..|+..+.+ .+.+++|+||.
T Consensus 142 ~p~gH~~~~~~~~~--~~~~~l~~GD~ 166 (402)
T 1e5d_A 142 TRMLHWPDSMVSWF--ADEKVLISNDI 166 (402)
T ss_dssp CTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred CCCCCCCCcEEEEE--CCCCEEEeccc
Confidence 5 89999998765 46799999996
No 32
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.71 E-value=1.5e-08 Score=104.13 Aligned_cols=136 Identities=8% Similarity=-0.032 Sum_probs=83.6
Q ss_pred CCccccccccchh--------hhc---ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIF--------IKL---YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELI 77 (615)
Q Consensus 11 ~~~~~lldcg~~f--------~~~---~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~ 77 (615)
.+..+|+|||... +.. ...+| +|++||+|.||+|+++.+.+. | .++||+++.+.+..+-... .
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~--~~~a~v~~~~~~~~~~~~~~~--~ 108 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPR--LPNVQVLASERTCQAWKSESA--V 108 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGG--CTTCEEEEEHHHHHHTTCHHH--H
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHh--CCCCeEEECHHHHHHHhccch--h
Confidence 3567899999732 111 25789 999999999999999999875 4 6899999999865431110 0
Q ss_pred HHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEE
Q 007166 78 CMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 157 (615)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it 157 (615)
.....+.+.. . ..|.. .... ..+.. ..+..+.-++.+++.++.+++
T Consensus 109 ~~~~~~~~~~--~----~~~~~------------------~~~~-----~~~~~-----~~~~~~~~g~~~~lg~g~~l~ 154 (303)
T 2vw8_A 109 RVVERLNRQL--L----RAEQR------------------LPEA-----CAWDA-----LPVRAVADGEWLELGPRHRLQ 154 (303)
T ss_dssp HHHHHHHHHT--C----CTTCC------------------CCCC-----CCGGG-----SCEEEECTTCEEEEETTEEEE
T ss_pred hHHHHHHHHH--H----Hhhcc------------------cccc-----cCCCC-----CCceEcCCCCEEecCCCeEEE
Confidence 0000000000 0 00000 0000 00000 123667788899986545666
Q ss_pred Eecc-ccccceEEEEEEeCCeeEEEecCCC
Q 007166 158 AFSS-GLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 158 ~~~A-GHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
++.. ||..|+..+.+. +.+++|+||..
T Consensus 155 ~i~~pGHt~g~~~~~~~--~~~~lf~GD~~ 182 (303)
T 2vw8_A 155 VIEAHGHSDDHVVFYDV--RRRRLFCGDAL 182 (303)
T ss_dssp EEECTTSSTTCEEEEET--TTTEEEEETTT
T ss_pred EEECCCCCcccEEEEEC--CCCEEEEcCcc
Confidence 5544 999999998875 57899999953
No 33
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=98.70 E-value=1.7e-08 Score=97.96 Aligned_cols=118 Identities=11% Similarity=0.019 Sum_probs=76.6
Q ss_pred Cccccccccchh------hhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhh
Q 007166 12 HSQSFLHCQMIF------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYR 84 (615)
Q Consensus 12 ~~~~lldcg~~f------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~ 84 (615)
+..+|+|||... ++....+| +|++||+|.||+|+++.+.+. |..+||+++.+.+..+-..... ..
T Consensus 22 ~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~----~~-- 93 (207)
T 2zwr_A 22 EGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEA--LDLPVYLHPLDLPLYEGADLAA----RA-- 93 (207)
T ss_dssp TEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHH--HCCCEEECGGGHHHHHTHHHHH----HH--
T ss_pred CcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHH--hCCcEEECHHHHHHHhCchhhh----hh--
Confidence 567999999522 11113459 999999999999999999875 4689999999987643221111 00
Q ss_pred hhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccc
Q 007166 85 QFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 164 (615)
Q Consensus 85 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHi 164 (615)
+|.. ... + + .....++-++.+. .+++... .||.
T Consensus 94 --~g~~----------------------------~~~---~-~---------~~~~~~~~g~~i~---~~~~~~~-pGHt 126 (207)
T 2zwr_A 94 --WGLA----------------------------IPK---P-P---------LPVRPLEEGMRLF---GFQVLHL-PGHS 126 (207)
T ss_dssp --TTCC----------------------------CCC---C-C---------SCCEECCTTCEET---TEEEEEC-CSSS
T ss_pred --cCCC----------------------------CCc---C-C---------CCceEeCCCCEEE---EEEEEeC-CCCC
Confidence 1100 000 0 0 0123445555544 4677655 4899
Q ss_pred cceEEEEEEeCCeeEEEecCCC
Q 007166 165 IGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 165 LGsa~~~I~~~~~~IvYtgD~s 186 (615)
.|+..+.++ +++++|+||..
T Consensus 127 ~g~~~~~~~--~~~~lf~GD~~ 146 (207)
T 2zwr_A 127 PGHVAFYDP--EGAQVFSGDLL 146 (207)
T ss_dssp TTCEEEEET--TTTEEEEETSE
T ss_pred CCcEEEEEC--CCCEEEEeccc
Confidence 999999885 67899999954
No 34
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=98.70 E-value=6.1e-08 Score=99.66 Aligned_cols=123 Identities=13% Similarity=0.251 Sum_probs=83.7
Q ss_pred Cccccccccchhh---------------h---cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIFI---------------K---LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLM 72 (615)
Q Consensus 12 ~~~~lldcg~~f~---------------~---~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~ll 72 (615)
+..+|+|||..+. + ..--+| +||+||.|.||+||+++|.+. |.++||+++.+.++.+..
T Consensus 28 ~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~--~~a~i~~~~~~~~~~~~~ 105 (298)
T 4efz_A 28 GECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTR--VGGEIAIGRHVTRVQDVF 105 (298)
T ss_dssp CEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHH--HCCEEEEETTHHHHHHHH
T ss_pred CeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHH--hCCcEEEChhHHHHHHHH
Confidence 3478999996321 1 113469 999999999999999999986 469999999887654321
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCC
Q 007166 73 MEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNG 152 (615)
Q Consensus 73 l~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g 152 (615)
-. .++.... + ... . ......+.-++.+.+.
T Consensus 106 ~~-----------~~~~~~~----~---------------------~~~-----~--------~~~~~~~~~g~~l~~g- 135 (298)
T 4efz_A 106 GK-----------LFNAGPA----F---------------------AHD-----G--------SQFDRLLDDGDTLALG- 135 (298)
T ss_dssp HH-----------HTTCCTT----S---------------------CSS-----S--------TTSSEEECTTCEEEET-
T ss_pred HH-----------hcCCccc----c---------------------ccc-----c--------cCCCEEeCCCCEEEEC-
Confidence 10 0111000 0 000 0 0012567788999984
Q ss_pred cEEEEEec-cccccceEEEEEEeCCee------EEEecCCC
Q 007166 153 ILIIKAFS-SGLDIGACNWIISGAKGN------IAYISGSN 186 (615)
Q Consensus 153 ~l~it~~~-AGHiLGsa~~~I~~~~~~------IvYtgD~s 186 (615)
+++++++. .||..|+..+.+...+++ ++|+||..
T Consensus 136 ~~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~lftGD~l 176 (298)
T 4efz_A 136 ALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTL 176 (298)
T ss_dssp TEEEEEEECCSSSTTCEEEEEEETTCCGGGCBCEEECCSSB
T ss_pred CEEEEEEECCCCCcccEEEEECCCcccccCCceEEEEcCcc
Confidence 56777766 499999999999887655 99999954
No 35
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.70 E-value=1.4e-08 Score=106.14 Aligned_cols=129 Identities=11% Similarity=0.097 Sum_probs=81.7
Q ss_pred Cccccccccch---------hhhc------ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI---------FIKL------YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMME 74 (615)
Q Consensus 12 ~~~~lldcg~~---------f~~~------~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~ 74 (615)
+..+|+|||.. +.+. .+.+| +|++||.|.||+|+++.+.+. -| +.+||+++.+.+...
T Consensus 106 ~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~-~fp~a~v~~~~~~~~~~~---- 180 (331)
T 1p9e_A 106 SKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQL-AFPNAVVRADQKEADFWL---- 180 (331)
T ss_dssp SCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEE-SSTTCEEECBHHHHHHHS----
T ss_pred CEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccc-cCCCCEEEECHHHHHHHh----
Confidence 56799999964 2111 15689 999999999999999954332 35 689999998875321
Q ss_pred HHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCC-chHH----HHHHH--HhcceeecCCcE
Q 007166 75 ELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGC-PCIA----HVKDC--ISKVQTLRFGEE 147 (615)
Q Consensus 75 D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ly~----dv~~~--~~~i~~v~Y~q~ 147 (615)
+..... ..+ . .+. ..|+ .++.. -.+++.++-+++
T Consensus 181 ~~~~~~------------------------~~~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 221 (331)
T 1p9e_A 181 SQTNLD------------------------KAP------------D---DESKGFFKGAMASLNPYVKAGKFKPFSGNTD 221 (331)
T ss_dssp CHHHHT------------------------TCS------------S---TTSCHHHHHHHHHHHHHHHTTCBCCBCSSEE
T ss_pred Cchhhc------------------------cCc------------h---hhhhHHHHHHHHHhhhhcccCceEEeCCCCE
Confidence 110000 000 0 001 1121 12111 134555655554
Q ss_pred EEeCCcEEEEEeccccccceEEEEEEeCCeeEEEecCCCC
Q 007166 148 ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 148 ~~l~g~l~it~~~AGHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
+. .++++.+.+ ||..|++.+.++.++++++|+||...
T Consensus 222 i~--~gi~vi~tp-GHtpG~~~~~i~~~~~~vlf~GD~~~ 258 (331)
T 1p9e_A 222 LV--PGIKALASH-GHTPGHTTYVVESQGQKLALLGDLIL 258 (331)
T ss_dssp CS--TTEEEEECT-TSSTTCEEEEEEETTEEEEECTTSCC
T ss_pred Ec--ccEEEEEcC-CCChhCEEEEEEECCcEEEEEECccC
Confidence 43 347777765 99999999999998999999999553
No 36
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=98.70 E-value=3.8e-08 Score=99.50 Aligned_cols=122 Identities=10% Similarity=0.054 Sum_probs=67.5
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
+.+| +|++||+|.||+|+++++. +.+||+++.+.+...-..... ... |.. ..|.. .+
T Consensus 86 ~~~i~~VilTH~H~DH~gg~~~~~-----~a~v~~~~~~~~~~~~~~~~~---~~~----~~~-----~~~~~-----~~ 143 (274)
T 3aj3_A 86 PRDIDVVVNSHFHFDHCGGNKYFP-----HAKKICHRSEVPQACNPQPFE---HLG----YSD-----LSFSA-----EA 143 (274)
T ss_dssp GGGCCEEECSCCSGGGTTTGGGCT-----TSEEEEETTHHHHHHSCCGGG---TTT----TCC-----CTTCH-----HH
T ss_pred HHHCCEEEecCcCcccCCchhhCC-----CCEEEECHHHHHHHhCcCCcc---ccc----cCh-----hhhcc-----cc
Confidence 5679 9999999999999999872 479999998865432100000 000 000 00000 00
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccceEEEEEEeC-CeeEEEecCC
Q 007166 107 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA-KGNIAYISGS 185 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLGsa~~~I~~~-~~~IvYtgD~ 185 (615)
+..... |...++++...-.++..++ +.+++.|.+++.+.+ ||..|++.+.++.+ +++++|+||.
T Consensus 144 ~~~~~~------------~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~v~~~p-GHt~g~~~~~~~~~~~~~~lf~GD~ 208 (274)
T 3aj3_A 144 AEARGA------------TAQLLEGTTRANSTFEGID--GDVDLARGVKLISTP-GHSIGHYSLLVEFPRRKPILFTIDA 208 (274)
T ss_dssp HHHHTC------------GGGCCTTCCSTTSCEEEEC--SSEEEETTEEEEECT-TSSTTCEEEEECCSSSCCEEEEETT
T ss_pred cccccc------------ccccccccccCCCCceEcC--CccccCCEEEEEECC-CCCceeeEEEEECCCCCEEEEEech
Confidence 000000 0000000000001233443 457773338888776 89999999999876 6799999995
Q ss_pred C
Q 007166 186 N 186 (615)
Q Consensus 186 s 186 (615)
.
T Consensus 209 ~ 209 (274)
T 3aj3_A 209 A 209 (274)
T ss_dssp C
T ss_pred h
Confidence 4
No 37
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.68 E-value=1.5e-08 Score=103.69 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=81.2
Q ss_pred CCccccccccch--------hhhc---ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMI--------FIKL---YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELIC 78 (615)
Q Consensus 11 ~~~~~lldcg~~--------f~~~---~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~ 78 (615)
.+..+|+|||.. .+.. .+.+| +||+||.|.||+|+++.+.+. +..+||+++.+.++.+-..
T Consensus 66 ~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~~~----- 138 (303)
T 4ax1_B 66 DAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKA--TGAPVYARAPAIDTLKRGL----- 138 (303)
T ss_dssp TTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHH--HCCCEEEEHHHHHHHHHTS-----
T ss_pred CCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhh--cCCEEEEcHHHHHHHhccc-----
Confidence 357899999952 1111 14569 999999999999999999876 4689999998876433110
Q ss_pred HHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEE
Q 007166 79 MNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 158 (615)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~ 158 (615)
.. .....|.. ... .+ .....+.++.++++.+. +.++++
T Consensus 139 ----------~~-~~~~~~~~-------------------~~~----~~-------~~~~~~~~~~g~~~~~g-~~~v~~ 176 (303)
T 4ax1_B 139 ----------PD-RTDPNFEV-------------------AEP----VA-------PVANIVTLADDGVVSVG-PLALTA 176 (303)
T ss_dssp ----------CC-TTSTTGGG-------------------CCC----CC-------CCSCEEEECTTCEEEET-TEEEEE
T ss_pred ----------cC-cccccccc-------------------ccC----cC-------CCCCcEEeCCCCEEEEC-CeEEEE
Confidence 00 00000000 000 00 01245678889999995 567777
Q ss_pred ec-cccccceEEEEEEeC--C-eeEEEecCCC
Q 007166 159 FS-SGLDIGACNWIISGA--K-GNIAYISGSN 186 (615)
Q Consensus 159 ~~-AGHiLGsa~~~I~~~--~-~~IvYtgD~s 186 (615)
+. .||..|+..+.++.. . .+.+++||..
T Consensus 177 ~~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l 208 (303)
T 4ax1_B 177 VASPGHTPGGTSWTWRSCEGDDCRQMVYADSL 208 (303)
T ss_dssp EECCSSSTTCEEEEEEEEETTEEEEEEECCCC
T ss_pred EeCCCCCccceEEEEEecCCCceeEEEEeCCc
Confidence 65 689999999998753 1 1234448854
No 38
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.65 E-value=3.6e-08 Score=96.66 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=78.3
Q ss_pred Cccccccccch---------hhhcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI---------FIKLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~---------f~~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||.. ++... ..+| +|++||.|.||+|+++++.+ ...+||+++.+.+..+ +.
T Consensus 36 ~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~----~~---- 104 (223)
T 1m2x_A 36 KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK---IGAKTYSTKMTDSILA----KE---- 104 (223)
T ss_dssp TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH---TTCEEEEEHHHHHHHH----HT----
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh---CCCeEEEcHHHHHHHH----hc----
Confidence 56789999952 11221 3589 99999999999999999986 4689999998865422 00
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe-
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF- 159 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~- 159 (615)
... .+ ...+.-++.+.+. +.+++++
T Consensus 105 --------------------------------------~~~----~~-----------~~~~~~g~~~~~g-~~~i~~~~ 130 (223)
T 1m2x_A 105 --------------------------------------NKP----RA-----------QYTFDNNKSFKVG-KSEFQVYY 130 (223)
T ss_dssp --------------------------------------TCC----CC-----------SEEESSCEEEEET-TEEEEEEC
T ss_pred --------------------------------------Ccc----CC-----------ceecCCCceEEEC-CEEEEEEe
Confidence 000 00 1345667888884 5788887
Q ss_pred -ccccccceEEEEEEeCCeeEEEecCCC
Q 007166 160 -SSGLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 160 -~AGHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
..||..|+..+.+. +.+++|+||..
T Consensus 131 ~~pgHt~~~~~~~~~--~~~~lf~GD~~ 156 (223)
T 1m2x_A 131 PGKGHTADNVVVWFP--KEKVLVGGCII 156 (223)
T ss_dssp CCSSSSSSCCEEEET--TTTEEEEETTS
T ss_pred cCCCCCCCCEEEEEC--CCCEEEEeccc
Confidence 58999999998874 56899999943
No 39
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.64 E-value=9.6e-09 Score=102.15 Aligned_cols=117 Identities=13% Similarity=0.078 Sum_probs=76.6
Q ss_pred Cccccccccch---------hhhcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI---------FIKLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~---------f~~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||.. +.+.. ..+| +||+||.|.||+|+++.+.+. ..+||+++.+.++.+ + .
T Consensus 57 ~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~----~----~ 125 (243)
T 4hl2_A 57 GRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSNQLAP----Q----E 125 (243)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHHHHGG----G----T
T ss_pred CcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC---CCeEEECHHHHHHHh----c----c
Confidence 46789999941 12222 4469 999999999999999999873 689999998764321 0 0
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~ 160 (615)
+.. ... ..+. +.....+.-++.+.+ |++++....
T Consensus 126 -------~~~----------------------------~~~-----~~~~-----~~~~~~~~~g~~~~~-g~~~v~~~~ 159 (243)
T 4hl2_A 126 -------GMV----------------------------AAQ-----HSLT-----FAANGWVEPATAPNF-GPLKVFYPG 159 (243)
T ss_dssp -------TCC----------------------------CCS-----EEEC-----BCTTSBBCGGGSTTC-TTEEEECCC
T ss_pred -------ccc----------------------------ccc-----cccc-----cccceEecCCCeEEE-CCEEEEeCC
Confidence 000 000 0000 001123444555566 467886578
Q ss_pred cccccceEEEEEEeCCeeEEEecCCCC
Q 007166 161 SGLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 161 AGHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
.||..|+..+.++ +.+++|+||...
T Consensus 160 pGHt~g~~~~~~~--~~~~lf~GD~~~ 184 (243)
T 4hl2_A 160 PGHTSDNITVGID--GTDIAFGGCLIK 184 (243)
T ss_dssp SSSSTTCCEEEET--TTTEEECTTTCC
T ss_pred CCCCcCCEEEEEc--CCCEEEEcceee
Confidence 8999999999885 568999999543
No 40
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.62 E-value=4.1e-08 Score=96.45 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=47.3
Q ss_pred Cccccccccchh---------hhc-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIF---------IKL-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMME 74 (615)
Q Consensus 12 ~~~~lldcg~~f---------~~~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~ 74 (615)
+..+|+|||... +.. ...+| +|++||.|.||+||++.+.+ ...+||+++.+.++.+-...
T Consensus 35 ~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~~~~~ 105 (233)
T 3q6v_A 35 DGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT---LGAKIVATQMTYDLQKSQWG 105 (233)
T ss_dssp SCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh---CCCEEEEcHHHHHHHHhhhH
Confidence 567899999632 111 26789 99999999999999999984 46899999999887764443
No 41
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=98.62 E-value=6.3e-08 Score=99.99 Aligned_cols=142 Identities=13% Similarity=0.097 Sum_probs=83.7
Q ss_pred Cccccccccchhh----------hc---ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHH-
Q 007166 12 HSQSFLHCQMIFI----------KL---YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL- 76 (615)
Q Consensus 12 ~~~~lldcg~~f~----------~~---~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~- 76 (615)
++.+|+|||.... .. .+.+| +|++||+|.||+|+++++.+. ..+||+++.+.+..+-.....
T Consensus 31 ~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~~~~~~~ 107 (317)
T 2zo4_A 31 GEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEEEFARGHRFWREPE 107 (317)
T ss_dssp TEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGGGTTTHHHHHHCTT
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHHHHHHHHhhhhhhh
Confidence 4678999996321 11 13579 999999999999999999874 589999999877554322100
Q ss_pred --HHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHH---HHHhcceeecCCcEEEeC
Q 007166 77 --ICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVK---DCISKVQTLRFGEEACYN 151 (615)
Q Consensus 77 --~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~---~~~~~i~~v~Y~q~~~l~ 151 (615)
......+-+..|..... ...+ ........ ........+.-++.+.+.
T Consensus 108 ~~~~~~~~~~~~~g~~~~~---------~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~l~~g 159 (317)
T 2zo4_A 108 AFAEASWRLFLDHGTPEGA---------LQGI-------------------RETVEKTRERVHPPQNPLPLRDGEALEVA 159 (317)
T ss_dssp TSHHHHHHHHHHTTCCC-----------------------------------CHHHHHHTTCCCCSSCEEECTTCEEEET
T ss_pred hHHHHHHHHHHHcCCCHHH---------HHHH-------------------HHhcccccccCCCCCCceEECCCCEEEeC
Confidence 00000000000100000 0000 00000000 001134667778889885
Q ss_pred CcEEEEEecc-ccccceEEEEEEeCCeeEEEecCCCC
Q 007166 152 GILIIKAFSS-GLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 152 g~l~it~~~A-GHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
+.+++++.. ||..|+..+.+ ++.+++|+||...
T Consensus 160 -g~~~~~i~tpGHt~g~~~~~~--~~~~~lf~GD~~~ 193 (317)
T 2zo4_A 160 -GKRLRVLWTPGHADGHAAFYL--EEEGVLLAGDALL 193 (317)
T ss_dssp -TEEEEEEECCSSSTTCEEEEE--TTTTEEEEETSCC
T ss_pred -CceEEEEECCCCCcccEEEEe--CCCCEEEECCEec
Confidence 567887776 99999999875 5678999999553
No 42
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.60 E-value=4.5e-08 Score=104.62 Aligned_cols=112 Identities=13% Similarity=0.045 Sum_probs=79.8
Q ss_pred Cccccccccch-----hhh---c-----ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-----FIK---L-----YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEEL 76 (615)
Q Consensus 12 ~~~~lldcg~~-----f~~---~-----~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~ 76 (615)
+..+|+|||.. +.+ . ...+| +|++||.|.||+|+++.+.+. | ..+||+++.+.+..+ +.
T Consensus 44 ~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~p~~~v~~~~~~~~~~~----~~ 117 (404)
T 2ohh_A 44 EGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRR--FPEAPIYCTEVAVKGLL----KH 117 (404)
T ss_dssp SCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHH--STTCCEEECHHHHHHHH----HH
T ss_pred CcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHH--CCCCEEEECHHHHHHHH----HH
Confidence 34789999964 111 1 34789 999999999999999999875 4 689999998866432 11
Q ss_pred HHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEE
Q 007166 77 ICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILII 156 (615)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~i 156 (615)
... + .. ..+..++-++.+.+. +.++
T Consensus 118 ~~~---------------------------~------------~~---------------~~~~~~~~g~~~~~g-~~~i 142 (404)
T 2ohh_A 118 YPS---------------------------L------------RE---------------AEFMTVKTGDVLDLG-GKTL 142 (404)
T ss_dssp CGG---------------------------G------------GG---------------SCEEECCTTCEEECS-SCEE
T ss_pred hcc---------------------------c------------cc---------------CCceEcCCCCEEEEC-CEEE
Confidence 000 0 00 123566778888885 5577
Q ss_pred EEecc--ccccceEEEEEEeCCeeEEEecCCC
Q 007166 157 KAFSS--GLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 157 t~~~A--GHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
+++++ ||..|+..+.+. ..+++|+||..
T Consensus 143 ~~~~~p~gH~~~~~~~~~~--~~~~lf~GD~~ 172 (404)
T 2ohh_A 143 TFLETPLLHWPDSMFTLLD--EDGILFSNDAF 172 (404)
T ss_dssp EEEECTTSSSTTCEEEEEE--TTTEEECTTTT
T ss_pred EEEeCCCCCCCCceEEEEC--CCcEEEecCcc
Confidence 77665 899999998874 46899999954
No 43
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.60 E-value=3.9e-08 Score=99.16 Aligned_cols=111 Identities=12% Similarity=0.020 Sum_probs=78.1
Q ss_pred Cccccccccch-h----hh---c--ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-F----IK---L--YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~-f----~~---~--~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. + .+ . ...+| +|++||.|.||+|+++.+.+. | ..+||+++.+.+..+- ..
T Consensus 51 ~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~~v~~~~~~~~~l~~----~~-- 122 (262)
T 3hnn_A 51 DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLEL--APQITFVCSLPAAGDLRA----AF-- 122 (262)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHH--CTTCEEEECHHHHHHHHH----HS--
T ss_pred CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHH--CCCCEEEECHHHHHHHHH----Hh--
Confidence 56789999963 1 11 1 24789 999999999999999999886 4 6899999998764321 10
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEE-
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA- 158 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~- 158 (615)
+ .. -..++.++-++++++.++.++++
T Consensus 123 --------~-------------------------------~~--------------~~~~~~~~~g~~l~lg~~~~~~~i 149 (262)
T 3hnn_A 123 --------P-------------------------------DD--------------NLNILPMRGKETLDLGKGHVLKFL 149 (262)
T ss_dssp --------S-------------------------------SS--------------CCEEEECCSSCEEECSTTCEEEEE
T ss_pred --------C-------------------------------CC--------------CCceEEeCCCCEEEcCCCcEEEEE
Confidence 0 00 01345677889999852444444
Q ss_pred -eccccccceEEEEEEeCCeeEEEecCC
Q 007166 159 -FSSGLDIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 159 -~~AGHiLGsa~~~I~~~~~~IvYtgD~ 185 (615)
.+.+|..|+..+.+ .+.+++|+||.
T Consensus 150 ~tpg~Ht~g~~~~~~--~~~~~lfsGD~ 175 (262)
T 3hnn_A 150 PIPSPRWPAGLCTYD--VQTQILYTDKI 175 (262)
T ss_dssp ECCCSSCTTCEEEEE--TTTTEEEEETT
T ss_pred ECCCCCCCCeeEEEe--CCCCEEEEeec
Confidence 44449999987764 46789999995
No 44
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.59 E-value=6.3e-08 Score=95.53 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=78.3
Q ss_pred Cccccccccchh---------hhcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIF---------IKLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~f---------~~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||... +... ..+| +|++||.|.||+|+++.+.+ +..+||+++.+.++.+ +.
T Consensus 46 ~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~----~~---- 114 (232)
T 1a7t_A 46 HQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR---KGVQSYANQMTIDLAK----EK---- 114 (232)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHH----HH----
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh---CCCeEEEcHHHHHHHH----hc----
Confidence 567899999531 1122 5689 99999999999999999986 3689999998865421 00
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~ 160 (615)
+.. + ....+.-++.+.+. +.+++++.
T Consensus 115 --------------------------------------~~~-----~----------~~~~~~~g~~~~~g-~~~i~~~~ 140 (232)
T 1a7t_A 115 --------------------------------------GLP-----V----------PEHGFTDSLTVSLD-GMPLQCYY 140 (232)
T ss_dssp --------------------------------------TCC-----C----------CSEEESSEEEEEET-TEEEEEEC
T ss_pred --------------------------------------CCC-----C----------CceecCCCCEEEEC-CeEEEEEe
Confidence 000 0 11345556777884 57888874
Q ss_pred --cccccceEEEEEEeCCeeEEEecCCCC
Q 007166 161 --SGLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 161 --AGHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
.||..|+..+.+. ..+++|+||...
T Consensus 141 ~~pgHt~g~~~~~~~--~~~~lf~GD~~~ 167 (232)
T 1a7t_A 141 LGGGHATDNIVVWLP--TENILFGGCMLK 167 (232)
T ss_dssp CCCSSSTTCCEEEET--TTTEEEEETTSC
T ss_pred CCCCCCCCCEEEEEC--CCCEEEEcCccc
Confidence 7999999999874 468999999543
No 45
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.59 E-value=2.9e-08 Score=97.13 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=48.0
Q ss_pred CCccccccccchh---------hhc-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMIF---------IKL-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEE 75 (615)
Q Consensus 11 ~~~~~lldcg~~f---------~~~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D 75 (615)
.+..+|+|||... +.. ...+| +|++||+|.||+|+++++.+ +..+||+++.+.++.+-...+
T Consensus 31 ~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~~ 103 (227)
T 3iog_A 31 AKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVVSTRQTRDLMKSDWAE 103 (227)
T ss_dssp SSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh---CCCeEEECHHHHHHHHHhhHH
Confidence 3567999999621 112 25789 99999999999999999875 579999999999876654433
No 46
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.58 E-value=1.8e-07 Score=98.94 Aligned_cols=118 Identities=14% Similarity=0.076 Sum_probs=78.8
Q ss_pred cCcE-EEEEecCCccccc--hHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhh
Q 007166 28 ARKI-LILKTGRSPMGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~g--aLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 104 (615)
..+| +|||||.|.||+| ++..+.+.+.-..+||++..+.+..+ ..
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~----~~---------------------------- 154 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWI----GW---------------------------- 154 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHH----HH----------------------------
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHH----Hc----------------------------
Confidence 3679 9999999999998 57767654212689999987654321 10
Q ss_pred hchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecccc------------cc-------
Q 007166 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL------------DI------- 165 (615)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGH------------iL------- 165 (615)
+. + ..++..++.++++++. +++|+++++-| ..
T Consensus 155 --------------g~------~--------~~~~~~l~~g~~~~~g-~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~ 205 (360)
T 2wyl_A 155 --------------GV------P--------KERCIVVKPGDVVKVK-DIEIHALDAFDRTALITLPADQKAAGVLPDGM 205 (360)
T ss_dssp --------------TC------C--------GGGEEECCTTCEEEET-TEEEEEEECCCC------------------CC
T ss_pred --------------CC------C--------hheEEEcCCCCEEEEC-CEEEEEEeccCccccccccccccccccccccc
Confidence 00 0 0145678888999985 68999999844 22
Q ss_pred --ceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeC
Q 007166 166 --GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209 (615)
Q Consensus 166 --Gsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~e 209 (615)
+++.|.|+.++.+|+|+||........ ......++|++++.
T Consensus 206 ~~~~~g~~i~~~g~~i~~sGDt~~~~~~~---~i~~~~~~Dv~il~ 248 (360)
T 2wyl_A 206 DDRAVNYLFKTPGGSLYHSGDSHYSNYYA---KHGNEHQIDVALGS 248 (360)
T ss_dssp TTTBEEEEEEETTEEEEECTTCCCCTTHH---HHHHHSCCCEEEEE
T ss_pred CcccEEEEEEECCcEEEEeCCCCcCHHHH---HHhhCCCCCEEEec
Confidence 378999999999999999965431100 00001257998885
No 47
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.57 E-value=1.1e-07 Score=101.41 Aligned_cols=110 Identities=7% Similarity=0.006 Sum_probs=78.8
Q ss_pred Cccccccccch-----hh---hc--ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-----FI---KL--YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~-----f~---~~--~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. +. .. ...+| +||+||.|.||+|+++.+.+. | ..+||+++.+.+..+ +..
T Consensus 44 ~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~--~~~~~v~~~~~~~~~l~----~~~-- 115 (398)
T 1ycg_A 44 DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMEL--CPDAHVLCTQRAFDSLK----AHY-- 115 (398)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHH--CTTCEEEECHHHHHHHH----HHT--
T ss_pred CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHH--CCCCEEEEcHHHHHHHH----HHh--
Confidence 35789999964 11 11 26789 999999999999999999886 4 689999998875432 110
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
+. .+ ..+..++-++.+++. +++++++
T Consensus 116 --------~~------------------------------~~---------------~~~~~~~~g~~~~~g-~~~~~~~ 141 (398)
T 1ycg_A 116 --------SH------------------------------ID---------------FNYTIVKTGTSVSLG-KRSLTFI 141 (398)
T ss_dssp --------CS------------------------------CC---------------CEEEECCTTCEEECS-SCEEEEE
T ss_pred --------CC------------------------------CC---------------cceEEeCCCCEEeeC-CcEEEEE
Confidence 00 00 123566778888885 4566665
Q ss_pred --ccccccceEEEEEEeCCeeEEEecCC
Q 007166 160 --SSGLDIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 160 --~AGHiLGsa~~~I~~~~~~IvYtgD~ 185 (615)
+.||..|+..+.+ .+.+++|+||.
T Consensus 142 ~~p~gH~~~~~~~~~--~~~~~lf~GD~ 167 (398)
T 1ycg_A 142 EAPMLHWPDSMFTYV--PEEALLLPNDA 167 (398)
T ss_dssp ECTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred eCCCCCCCCcEEEEE--CCCcEEEeccc
Confidence 4589999988765 56789999995
No 48
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.57 E-value=8.7e-08 Score=94.15 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=77.1
Q ss_pred Cccccccccchh------h---hcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIF------I---KLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~f------~---~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|||... . +.. ..+| +|++||.|.||+|+++.+.+. ..+||+++.+.++.+. .
T Consensus 50 ~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~--------~ 118 (227)
T 1mqo_A 50 KGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER---GIKAHSTALTAELAKK--------N 118 (227)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHHHHHHHHH--------T
T ss_pred CeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC---CcEEEeccchHHHHHh--------c
Confidence 567899999642 1 121 5789 999999999999999999875 5899999988654220 0
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe-
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF- 159 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~- 159 (615)
+.. . .+..+.-++.+.+ |+++++++
T Consensus 119 --------------------------------------~~~-----~----------~~~~~~~~~~~~~-g~~~i~~~~ 144 (227)
T 1mqo_A 119 --------------------------------------GYE-----E----------PLGDLQTVTNLKF-GNMKVETFY 144 (227)
T ss_dssp --------------------------------------TCC-----C----------CCCCBCSEEEEEE-TTEEEEEEC
T ss_pred --------------------------------------CCC-----C----------CccccCCCCeeeE-CCEEEEEEe
Confidence 000 0 0122334567777 56788875
Q ss_pred -ccccccceEEEEEEeCCeeEEEecCCC
Q 007166 160 -SSGLDIGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 160 -~AGHiLGsa~~~I~~~~~~IvYtgD~s 186 (615)
..||..|+..+.+. +.+++|+||..
T Consensus 145 ~~pgHt~g~~~~~~~--~~~~lf~GD~~ 170 (227)
T 1mqo_A 145 PGKGHTEDNIVVWLP--QYNILVGGCLV 170 (227)
T ss_dssp CCCSSSSSCCEEEET--TTTEEEEETTS
T ss_pred cCCCCCCCCEEEEEC--CCCEEEEeeee
Confidence 47999999998874 56899999954
No 49
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.56 E-value=8.2e-08 Score=103.12 Aligned_cols=111 Identities=9% Similarity=-0.050 Sum_probs=76.8
Q ss_pred Cccccccccch-----hh---hc--ccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI-----FI---KL--YARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~-----f~---~~--~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. +. .. .+.+| +|++||.|.||+|+++.|.+. | ..+||+++.+.+..+ +..
T Consensus 49 ~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~~v~~~~~~~~~~~----~~~-- 120 (414)
T 2q9u_A 49 ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK--FTNATFVCTKKCQEHLK----ILY-- 120 (414)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG--STTCEEEECHHHHHHHH----HHH--
T ss_pred CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH--CCCCEEEECHHHHHHHH----HHh--
Confidence 46789999963 11 11 15789 999999999999999999875 4 689999999876422 111
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCc-EEEEE
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI-LIIKA 158 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~-l~it~ 158 (615)
+. .+ ..+..++-++++.+.+. +++..
T Consensus 121 --------~~------------------------------~~---------------~~~~~~~~g~~~~lg~~~~~~~~ 147 (414)
T 2q9u_A 121 --------GM------------------------------EK---------------ATWLIVDDKYTLKIGKRTLKFIP 147 (414)
T ss_dssp --------CC------------------------------TT---------------CCEEECCTTCCEECSSCEEEEEE
T ss_pred --------CC------------------------------CC---------------CeeEEeCCCCEEEECCeEEEEEe
Confidence 00 00 02345666788888532 44445
Q ss_pred eccccccceEEEEEEeCCeeEEEecCC
Q 007166 159 FSSGLDIGACNWIISGAKGNIAYISGS 185 (615)
Q Consensus 159 ~~AGHiLGsa~~~I~~~~~~IvYtgD~ 185 (615)
.+.||..|+..+.+ .+.+++|+||.
T Consensus 148 ~p~gHt~~~~~~~~--~~~~~lf~GD~ 172 (414)
T 2q9u_A 148 VPLLHWPDSTFTYC--PEDKILFSNDG 172 (414)
T ss_dssp CTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred CCCCCCCCceEEEE--CCCeEEEEccc
Confidence 55689999987554 46789999994
No 50
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=98.55 E-value=8.9e-08 Score=96.58 Aligned_cols=124 Identities=17% Similarity=0.088 Sum_probs=78.0
Q ss_pred Cccccccccch--------hhhcc---cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI--------FIKLY---ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 12 ~~~~lldcg~~--------f~~~~---~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
+..+|+|||.. ++... +.+| +||+||.|.||+|+++.+.+. +..+||++..+.++.+- .
T Consensus 47 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~----~--- 117 (269)
T 1sml_A 47 DGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRR--TGAKVAANAESAVLLAR----G--- 117 (269)
T ss_dssp TEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHH--SSCEEEECHHHHHHHHT----T---
T ss_pred CceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHh--cCCeEEECHHHHHHHhc----C---
Confidence 56789999963 12211 4479 999999999999999999875 56899999988654321 0
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
... + ..|. .. ..+.+. .....++-++.+.+. +++++++
T Consensus 118 --------~~~-~--~~~~---------------------~~-~~~~~~--------~~~~~~~~g~~~~~g-~~~i~~~ 155 (269)
T 1sml_A 118 --------GSD-D--LHFG---------------------DG-ITYPPA--------NADRIVMDGEVITVG-GIVFTAH 155 (269)
T ss_dssp --------TCS-B--TTTB---------------------TS-SCCCCC--------CCSEECCTTCEEEET-TEEEEEE
T ss_pred --------Ccc-c--cccc---------------------cc-cCCCCC--------CCCeEeCCCCEEEEC-CEEEEEE
Confidence 000 0 0000 00 000010 123456778888884 5777776
Q ss_pred cc-ccccceEEEEEEe--CCe-eEEEecCCC
Q 007166 160 SS-GLDIGACNWIISG--AKG-NIAYISGSN 186 (615)
Q Consensus 160 ~A-GHiLGsa~~~I~~--~~~-~IvYtgD~s 186 (615)
.. ||..|+..+.++. ++. +.+++||..
T Consensus 156 ~~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l 186 (269)
T 1sml_A 156 FMAGHTPGSTAWTWTDTRNGKPVRIAYADSL 186 (269)
T ss_dssp ECCSSSTTCEEEEEEEEETTEEEEEEECCCC
T ss_pred ECCCCCcccEEEEEecccCCceeEEEEeccc
Confidence 54 8999999998875 232 234448853
No 51
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.50 E-value=1.9e-07 Score=93.39 Aligned_cols=105 Identities=11% Similarity=0.129 Sum_probs=75.7
Q ss_pred Cccccccccchhhh-------cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhh
Q 007166 12 HSQSFLHCQMIFIK-------LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEY 83 (615)
Q Consensus 12 ~~~~lldcg~~f~~-------~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~ 83 (615)
+..+|+|+|....+ ..--+| +||+||.|.||+|+++.|.+. -...+||++..+.. .
T Consensus 28 ~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~-~~~~~v~~~~~~~~------------~--- 91 (245)
T 2gcu_A 28 KPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTK-LPGVKSVISKASGS------------K--- 91 (245)
T ss_dssp CEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHH-STTCEEEEEGGGCC------------C---
T ss_pred CcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHh-CCCCeEEecccccc------------c---
Confidence 46789999974211 113469 999999999999999999873 13589999865410 0
Q ss_pred hhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecc-c
Q 007166 84 RQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-G 162 (615)
Q Consensus 84 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~A-G 162 (615)
....+.-++.+.+. +++++++.. |
T Consensus 92 ------------------------------------------------------~~~~~~~g~~~~~g-~~~i~v~~tpG 116 (245)
T 2gcu_A 92 ------------------------------------------------------ADLFLEPGDKVSIG-DIYLEVRATPG 116 (245)
T ss_dssp ------------------------------------------------------CSEEECTTCEEEET-TEEEEEEECCS
T ss_pred ------------------------------------------------------CCEEcCCCCEEEEC-CEEEEEEECCC
Confidence 01245567788884 567777654 9
Q ss_pred cccceEEEEEEeCC----eeEEEecCCCC
Q 007166 163 LDIGACNWIISGAK----GNIAYISGSNF 187 (615)
Q Consensus 163 HiLGsa~~~I~~~~----~~IvYtgD~s~ 187 (615)
|..|++.+.++..+ .+++|+||...
T Consensus 117 Ht~g~~~~~~~~~~~~~~~~~lftGD~~~ 145 (245)
T 2gcu_A 117 HTAGCVTYVTGEGADQPQPRMAFTGDAVL 145 (245)
T ss_dssp SSTTCEEEEECCSTTSCSSCEEEEETTSB
T ss_pred CCCCCEEEEECCccccccccEEEECCccc
Confidence 99999999987642 48999999553
No 52
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=98.50 E-value=3.9e-07 Score=97.01 Aligned_cols=118 Identities=16% Similarity=0.110 Sum_probs=80.1
Q ss_pred cCcE-EEEEecCCccccc--hHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhh
Q 007166 28 ARKI-LILKTGRSPMGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 104 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~g--aLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 104 (615)
..+| +|||||.|.||+| ++..+.+.+.-..+||++..+.+..+ ..
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~----~~---------------------------- 178 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWL----GW---------------------------- 178 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHH----HH----------------------------
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHH----Hc----------------------------
Confidence 4679 9999999999998 67777664212689999987654321 00
Q ss_pred hchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccc--------------------
Q 007166 105 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD-------------------- 164 (615)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHi-------------------- 164 (615)
+. + ..++..++.++++++. +++|+++++-|.
T Consensus 179 --------------g~------~--------~~~~~~l~~g~~~~~g-~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~ 229 (379)
T 3bv6_A 179 --------------GV------P--------QERCIVAKVGDVLEIG-DVKIRVLDSFDRTALVTLPKGVSSYDKAILDG 229 (379)
T ss_dssp --------------TC------C--------GGGEEECCTTCEEEET-TEEEEEEECCCHHHHTCCCTTSCSSCGGGGGC
T ss_pred --------------CC------C--------hhhEEEeCCCCEEEEC-CEEEEEEecccccccccccccccccccccccc
Confidence 00 0 0145678889999985 689999998663
Q ss_pred --cceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeC
Q 007166 165 --IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209 (615)
Q Consensus 165 --LGsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~e 209 (615)
.+++.|.|+.++.+|+|+||........ ......++|++++.
T Consensus 230 ~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~---~i~~~~~~Dv~il~ 273 (379)
T 3bv6_A 230 MDERAVNYLIETSGGSVYHSGDSHYSNYYA---KHGNDYQIDVALLS 273 (379)
T ss_dssp HHHHBEEEEEEETTEEEEECTTCCCCTTHH---HHHHHSCCSEEEEE
T ss_pred cCCceEEEEEEeCCeEEEEeCCCCccHHHH---HHhhcCCCCEEEec
Confidence 2478999999999999999965421100 00001157999885
No 53
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.50 E-value=1.4e-07 Score=97.68 Aligned_cols=106 Identities=11% Similarity=0.075 Sum_probs=76.9
Q ss_pred Cccccccccch------hhhcc---------cCcE-EEEEecCCccccchHHHhhcccC-----CCceEEeeHHHHHHHH
Q 007166 12 HSQSFLHCQMI------FIKLY---------ARKI-LILKTGRSPMGMLGLPFLTRMEG-----FSAKIYITEAAARIGQ 70 (615)
Q Consensus 12 ~~~~lldcg~~------f~~~~---------~~~I-aVllSHah~dH~gaLP~L~~~~g-----f~g~Iy~T~pT~~l~~ 70 (615)
+..+|+|||.. ++... +.+| +||+||.|.||+||++.|.+.+. ...+||+...+.
T Consensus 51 ~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~---- 126 (311)
T 2p18_A 51 HTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS---- 126 (311)
T ss_dssp TEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT----
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc----
Confidence 45789999731 22222 2679 99999999999999999987531 157899975431
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEe
Q 007166 71 LMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 150 (615)
Q Consensus 71 lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l 150 (615)
+. . ....+.-++.+.+
T Consensus 127 --------~~--------------------------------------~------------------~~~~l~~g~~l~l 142 (311)
T 2p18_A 127 --------IP--------------------------------------A------------------VTKPVREGDRVQV 142 (311)
T ss_dssp --------CT--------------------------------------T------------------CSEEECTTCEEEE
T ss_pred --------CC--------------------------------------C------------------CceEeCCCCEEEE
Confidence 00 0 1135566788888
Q ss_pred CCcEEEEEecc-ccccceEEEEEEeCC---e-eEEEecCCC
Q 007166 151 NGILIIKAFSS-GLDIGACNWIISGAK---G-NIAYISGSN 186 (615)
Q Consensus 151 ~g~l~it~~~A-GHiLGsa~~~I~~~~---~-~IvYtgD~s 186 (615)
|+++++++.+ ||..|+..+.++.++ . +++|+||..
T Consensus 143 -g~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l 182 (311)
T 2p18_A 143 -GDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTM 182 (311)
T ss_dssp -TTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTE
T ss_pred -CCeEEEEEECCCCCcccEEEEEecCCcCCcCCEEEEcCcc
Confidence 4577777776 999999999998766 7 999999954
No 54
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.48 E-value=2.7e-07 Score=99.17 Aligned_cols=111 Identities=15% Similarity=0.092 Sum_probs=81.1
Q ss_pred CCccccccccch-----hhhc-----ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHH
Q 007166 11 RHSQSFLHCQMI-----FIKL-----YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM 79 (615)
Q Consensus 11 ~~~~~lldcg~~-----f~~~-----~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~ 79 (615)
.+..+|+|.|.. |.+. .+.+| .|++||.|.||+|++|.|.++++-+.+||+++.++++.+ ...
T Consensus 60 ~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~----~~~-- 133 (410)
T 4dik_A 60 NGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLE----GFY-- 133 (410)
T ss_dssp SSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHH----HHH--
T ss_pred CCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHH----hhc--
Confidence 356789998842 2222 15789 999999999999999999987666889999998876532 111
Q ss_pred HHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEe
Q 007166 80 NMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 159 (615)
Q Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~ 159 (615)
+. ..++.++-++++++. +.+++++
T Consensus 134 ---------------------------------------~~----------------~~~~~v~dGd~l~lG-~~~L~~i 157 (410)
T 4dik_A 134 ---------------------------------------GI----------------KDVTVVKDGEEREIG-GKKFKFV 157 (410)
T ss_dssp ---------------------------------------CC----------------CCEEECCTTCEEEET-TEEEEEE
T ss_pred ---------------------------------------Cc----------------cceeEecCCCEEeec-ceEEEEe
Confidence 00 123567788999994 5677766
Q ss_pred cc-c-cccceEEEEEEeCCeeEEEecCCCC
Q 007166 160 SS-G-LDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 160 ~A-G-HiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
.+ | |..|+.++.. .+++||||.-+
T Consensus 158 ~tPg~H~p~~~~~y~----~~iLFsgD~fg 183 (410)
T 4dik_A 158 MTPWLHWPDTMVTYL----DGILFSCDVGG 183 (410)
T ss_dssp ECTTSSSTTCEEEEE----TTEEEEETTTC
T ss_pred cCCCCCCCCCeeEEe----CCceEcccccc
Confidence 65 4 9999988774 37999999543
No 55
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.47 E-value=1.6e-07 Score=94.69 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=72.1
Q ss_pred Cccccccccch-----hhhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhh
Q 007166 12 HSQSFLHCQMI-----FIKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQ 85 (615)
Q Consensus 12 ~~~~lldcg~~-----f~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~ 85 (615)
+..+|+|+|.. ++....-+| +||+||.|.||+||++.+.+.++ ..+||+.+.+. +.
T Consensus 29 ~~~vlID~G~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~------------~~----- 90 (258)
T 2qed_A 29 GRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFP-QMTVYGPAETQ------------DK----- 90 (258)
T ss_dssp SEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCT-TCEEEECGGGG------------GG-----
T ss_pred CcEEEEeCCCcHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCC-CCEEEeccccc------------CC-----
Confidence 45789999952 222223379 99999999999999999987632 38999986541 00
Q ss_pred hcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecc-ccc
Q 007166 86 FYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLD 164 (615)
Q Consensus 86 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~A-GHi 164 (615)
+ ....+.-++.+.+ |+.+++++.. ||.
T Consensus 91 ---------------------------------~------------------~~~~~~~g~~~~~-g~~~~~vi~tPGHt 118 (258)
T 2qed_A 91 ---------------------------------G------------------ATHLVGDGDTIRV-LGEKFTLFATPGHT 118 (258)
T ss_dssp ---------------------------------T------------------CSEECCTTCEEEE-TTEEEEEEECCSSS
T ss_pred ---------------------------------C------------------CcEEeCCCCEEEE-CCcEEEEEECCCCC
Confidence 0 0124455777888 4567777665 999
Q ss_pred cceEEEEEEeCCeeEEEecCCC
Q 007166 165 IGACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 165 LGsa~~~I~~~~~~IvYtgD~s 186 (615)
.|+..+. +.+++|+||..
T Consensus 119 ~g~~~~~----~~~~lftGD~l 136 (258)
T 2qed_A 119 LGHVCYF----SRPYLFCGDTL 136 (258)
T ss_dssp TTCEEEE----ETTEEEEETTE
T ss_pred CCCeEEE----cCCEEEECCCC
Confidence 9999887 46899999954
No 56
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=98.47 E-value=9.7e-08 Score=97.43 Aligned_cols=113 Identities=10% Similarity=0.025 Sum_probs=78.1
Q ss_pred Cccccccccchh-----------hhcccCcE-EEEEecCCccccchHHHhhcccC--CCceEEeeHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMIF-----------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEG--FSAKIYITEAAARIGQLMMEELI 77 (615)
Q Consensus 12 ~~~~lldcg~~f-----------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~g--f~g~Iy~T~pT~~l~~lll~D~~ 77 (615)
++.+|+|||... .+....+| +||+||+|.||+|+++.+.+.++ -..+||+...+..
T Consensus 41 ~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~---------- 110 (289)
T 4ad9_A 41 PRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQ---------- 110 (289)
T ss_dssp SSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSC----------
T ss_pred CceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcc----------
Confidence 567899999532 11113479 99999999999999999998642 2567887542210
Q ss_pred HHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEE
Q 007166 78 CMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 157 (615)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it 157 (615)
. .+ .+.. .-..+..+.-++++.+. +.+++
T Consensus 111 ------------~-----------------------------~~------~~~~---~~~~~~~~~~g~~~~~g-g~~~~ 139 (289)
T 4ad9_A 111 ------------R-----------------------------EE------IIGN---GEQQYVYLKDGDVIKTE-GATLR 139 (289)
T ss_dssp ------------C-----------------------------CC------CBTT---TTBCEEECCTTCEEEET-TEEEE
T ss_pred ------------h-----------------------------hh------hccC---CCCceEEcCCCCEEEeC-CeEEE
Confidence 0 00 0000 01234678889999995 57888
Q ss_pred Eecc-ccccceEEEEEEeCCeeEEEecCCCC
Q 007166 158 AFSS-GLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 158 ~~~A-GHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
++.. ||..|+..+.+. ..+++|+||...
T Consensus 140 ~~~~pGHt~~~~~~~~~--~~~~lftGD~~~ 168 (289)
T 4ad9_A 140 VLYTPGHTDDHMALLLE--EENAIFSGDCIL 168 (289)
T ss_dssp EEECCSSSTTCEEEEET--TTTEEEEETSSC
T ss_pred EEECCCCCCCCEEEEEc--CCCEEEEecccC
Confidence 8877 999999999884 557999999543
No 57
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.42 E-value=2.3e-07 Score=93.66 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=73.5
Q ss_pred Cccccccccch-----hhhcccCcE-EEEEecCCccccchHHHhhcccCC-CceEEeeHHHHHHHHHHHHHHHHHHHhhh
Q 007166 12 HSQSFLHCQMI-----FIKLYARKI-LILKTGRSPMGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYR 84 (615)
Q Consensus 12 ~~~~lldcg~~-----f~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf-~g~Iy~T~pT~~l~~lll~D~~~~~~~~~ 84 (615)
+..+|+|+|.. ++....-+| +||+||.|.||+||++.|.+. | ..+||+..... .
T Consensus 23 ~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~--~~~~~v~~~~~~~-------------~---- 83 (260)
T 1qh5_A 23 KEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKL--ESGLKVYGGDDRI-------------G---- 83 (260)
T ss_dssp TEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHH--STTCEEEESCTTS-------------T----
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHH--CCCCEEEECcccC-------------C----
Confidence 45789999942 122223469 999999999999999999886 4 58999964210 0
Q ss_pred hhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecc-cc
Q 007166 85 QFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GL 163 (615)
Q Consensus 85 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~A-GH 163 (615)
. ....+.-++.+.+. +++++++.. ||
T Consensus 84 ----------------------------------~------------------~~~~~~~g~~~~~g-~~~~~vi~tPGH 110 (260)
T 1qh5_A 84 ----------------------------------A------------------LTHKITHLSTLQVG-SLNVKCLATPCH 110 (260)
T ss_dssp ----------------------------------T------------------CSEECCTTCEEEET-TEEEEEEECCSS
T ss_pred ----------------------------------C------------------CCEEeCCCCEEEEC-CEEEEEEECCCC
Confidence 0 01244557778874 567776654 99
Q ss_pred ccceEEEEE-Ee--CCeeEEEecCCC
Q 007166 164 DIGACNWII-SG--AKGNIAYISGSN 186 (615)
Q Consensus 164 iLGsa~~~I-~~--~~~~IvYtgD~s 186 (615)
..|+..+.+ +. .+.+++|+||..
T Consensus 111 t~g~~~~~~~~~~~~~~~~lftGD~l 136 (260)
T 1qh5_A 111 TSGHICYFVSKPGGSEPPAVFTGDTL 136 (260)
T ss_dssp STTCEEEEEECSSSSSCCEEEEETTE
T ss_pred CCCCEEEEEeccCCCCCCEEEEcCcc
Confidence 999999998 44 467899999954
No 58
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.42 E-value=1.1e-07 Score=95.54 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=73.9
Q ss_pred ccccccccch-----hhhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhhh
Q 007166 13 SQSFLHCQMI-----FIKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQF 86 (615)
Q Consensus 13 ~~~lldcg~~-----f~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~~ 86 (615)
..+++|||.. ++.....+| +||+||.|.||+||++.|.+.+ ..+||+++.+.+. +
T Consensus 24 ~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~--------~--------- 84 (254)
T 1xm8_A 24 TVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY--GAKVIGSAMDKDR--------I--------- 84 (254)
T ss_dssp CEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH--CCEEEEEGGGGGG--------S---------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHc--CCeEEEchhhhhc--------C---------
Confidence 4689999942 122224479 9999999999999999998864 5899998754210 0
Q ss_pred cCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec-ccccc
Q 007166 87 YGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDI 165 (615)
Q Consensus 87 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~-AGHiL 165 (615)
+ + ....+.-++.+.+. +.+++++. .||..
T Consensus 85 --------------------~-----------~------------------~~~~~~~g~~~~lg-~~~~~vi~tPGHt~ 114 (254)
T 1xm8_A 85 --------------------P-----------G------------------IDMALKDGDKWMFA-GHEVHVMDTPGHTK 114 (254)
T ss_dssp --------------------T-----------T------------------EEEEECTTCEEEET-TEEEEEEECCSSSS
T ss_pred --------------------C-----------C------------------CceeeCCCCEEEEC-CEEEEEEECCCCCC
Confidence 0 0 01345567788884 56777765 49999
Q ss_pred ceEEEEEEeCCeeEEEecCCC
Q 007166 166 GACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 166 Gsa~~~I~~~~~~IvYtgD~s 186 (615)
|+..+.++ +.+++|+||..
T Consensus 115 g~~~~~~~--~~~~lftGD~l 133 (254)
T 1xm8_A 115 GHISLYFP--GSRAIFTGDTM 133 (254)
T ss_dssp SCEEEEEG--GGTEEEEETTE
T ss_pred CcEEEEEC--CCCEEEEcCcc
Confidence 99999885 46899999954
No 59
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.42 E-value=8.6e-08 Score=105.08 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCccccccccchh------hhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhh
Q 007166 11 RHSQSFLHCQMIF------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEY 83 (615)
Q Consensus 11 ~~~~~lldcg~~f------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~ 83 (615)
.+..+|+|+|... .+...-+| +||+||.|.||+|+++.|.+. +..+||+++.+...
T Consensus 26 ~~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~~~--------------- 88 (474)
T 3tp9_A 26 TGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADR--AGAAICVSDEGPPE--------------- 88 (474)
T ss_dssp TCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHH--HCCEEEEECCSCGG---------------
T ss_pred CCEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHH--HCCcEEEcCcchhh---------------
Confidence 3567899999531 22224479 999999999999999999886 56999998765210
Q ss_pred hhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecc-c
Q 007166 84 RQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-G 162 (615)
Q Consensus 84 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~A-G 162 (615)
|... .. + ....+.+.-++.+.+. +++++++.. |
T Consensus 89 -------------~~~~------------------~~------~--------~~~~~~~~~g~~~~~g-~~~i~~i~tPG 122 (474)
T 3tp9_A 89 -------------WKSE------------------YV------K--------AYPHRLLKDGDELHFG-NVRIVVMHTPG 122 (474)
T ss_dssp -------------GCCG------------------GG------G--------GSSEEEECTTCEEEET-TEEEEEEECCS
T ss_pred -------------hccc------------------cc------c--------cccceECCCCCEEEEC-CEEEEEEECCC
Confidence 0000 00 0 0112567778888884 577777654 9
Q ss_pred cccceEEEEEEeCCe-----eEEEecCCC
Q 007166 163 LDIGACNWIISGAKG-----NIAYISGSN 186 (615)
Q Consensus 163 HiLGsa~~~I~~~~~-----~IvYtgD~s 186 (615)
|..|++.+.+...+. +++||||..
T Consensus 123 Ht~g~~~~~~~~~~~~~~~~~~lftGD~l 151 (474)
T 3tp9_A 123 HTPEHVSYLLYDGKTSPDVPMALFSGDFV 151 (474)
T ss_dssp SSSSCEEEEEEETTTEEEEEEEEEEETSE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEeCCcc
Confidence 999999999987654 899999954
No 60
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=98.41 E-value=4.7e-07 Score=91.32 Aligned_cols=112 Identities=12% Similarity=0.066 Sum_probs=77.8
Q ss_pred CcE-EEEEecCCccccchHHHhhcccCCCceEEee-HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 007166 29 RKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYIT-EAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 106 (615)
Q Consensus 29 ~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T-~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (615)
.+| +|||||.|.||+++++.+..+ ...+||++ ..+.+..+ + .
T Consensus 63 ~~id~iliTH~H~DH~~~~~~~~~~--~~~~v~~~~~~~~~~l~-----------~----~------------------- 106 (264)
T 3rpc_A 63 SNVTAVVVTHTHLDHWDDTAINSIP--KSLPIFVQNTADKELIT-----------S----Q------------------- 106 (264)
T ss_dssp TTCCEEECSCCCGGGSCHHHHHHSC--TTSCEEESSHHHHHHHH-----------H----T-------------------
T ss_pred ccCCEEEECCCchhhCCCHHHHhhc--cCCeEEEeCHHHHHHHH-----------h----c-------------------
Confidence 389 999999999999999998764 46899999 55543211 0 0
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEeccccccc--------------eEEEEE
Q 007166 107 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIG--------------ACNWII 172 (615)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiLG--------------sa~~~I 172 (615)
+. .++.. .++++++. +++|++++|-|..| .+.|.|
T Consensus 107 ------------g~----------------~~~~~--~~~~~~~~-~~~i~~~pa~H~~~~~~~~p~~~~~~~~~~g~~i 155 (264)
T 3rpc_A 107 ------------GF----------------IDVRI--IFESLEFN-GITLRKTGGSHGTVEMYANPVLAPLAGDAMGVIF 155 (264)
T ss_dssp ------------TC----------------SCEEE--CSSEEEET-TEEEEEECCCSSCHHHHTSTTHHHHHCCCCEEEE
T ss_pred ------------CC----------------CeeEE--ecccEEEC-CEEEEEeccccCCccccccccccccccccEEEEE
Confidence 10 11222 25788884 69999999999886 478999
Q ss_pred EeC-CeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeCC
Q 007166 173 SGA-KGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 210 (615)
Q Consensus 173 ~~~-~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~es 210 (615)
+.+ +.++.|+||........ +.....++|+++++.
T Consensus 156 ~~~~~~~i~~~GDt~~~~~~~---~~~~~~~~Dv~il~~ 191 (264)
T 3rpc_A 156 EAADEPTVYLVGDTVWTSDVE---KALLRFDPNVIIMNT 191 (264)
T ss_dssp ECTTSCCEEECCSCCSCHHHH---HHHHHHCCSEEEEEC
T ss_pred EeCCccEEEEECCcCchHHHH---HHHHHhCCCEEEEec
Confidence 987 78999999965321100 000002589999986
No 61
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.30 E-value=7.3e-07 Score=97.56 Aligned_cols=113 Identities=9% Similarity=0.059 Sum_probs=80.4
Q ss_pred CCccccccccchh------hhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhh
Q 007166 11 RHSQSFLHCQMIF------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEY 83 (615)
Q Consensus 11 ~~~~~lldcg~~f------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~ 83 (615)
.+..+|+|+|... .+....+| +||+||.|.||+|+++.|.+. |..+||+++.+.+
T Consensus 47 ~~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~--~~a~v~~~~~~~~---------------- 108 (466)
T 3r2u_A 47 TGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIK--LNANIYVSGESDD---------------- 108 (466)
T ss_dssp TCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHH--HCCEEEEECCSCT----------------
T ss_pred CCEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHh--hCCeEEECcchhh----------------
Confidence 3567899999421 22224579 999999999999999999986 4689999876210
Q ss_pred hhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec-cc
Q 007166 84 RQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SG 162 (615)
Q Consensus 84 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~-AG 162 (615)
.|. ... .+ .....+.-++++.+. +++++++. -|
T Consensus 109 ------------~~~--------------------~~~----~~---------~~~~~~~~g~~l~~g-~~~l~vi~tPG 142 (466)
T 3r2u_A 109 ------------TLG--------------------YKN----MP---------NHTHFVQHNDDIYVG-NIKLKVLHTPG 142 (466)
T ss_dssp ------------TTS--------------------CCS----CC---------TTCEEECTTCEEEET-TEEEEEEECCS
T ss_pred ------------hhc--------------------ccc----CC---------CCCEEeCCCCEEEEC-CEEEEEEECCC
Confidence 000 000 00 034677888999984 57888776 48
Q ss_pred cccceEEEEEEe-----CCeeEEEecCCCC
Q 007166 163 LDIGACNWIISG-----AKGNIAYISGSNF 187 (615)
Q Consensus 163 HiLGsa~~~I~~-----~~~~IvYtgD~s~ 187 (615)
|..|+..+.+.. ++.+++||||...
T Consensus 143 HT~g~~~~~~~~~~~~~~~~~~lftGD~lf 172 (466)
T 3r2u_A 143 HTPESISFLLTDEGAGAQVPMGLFSGDFIF 172 (466)
T ss_dssp SSTTCEEEEEECGGGTCCSCCEEEEETTBC
T ss_pred CCCCCEEEEEcCCCccCCCceEEEECCccc
Confidence 999999999986 3456999999553
No 62
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.30 E-value=3.6e-07 Score=101.98 Aligned_cols=129 Identities=12% Similarity=0.075 Sum_probs=77.7
Q ss_pred cCcE-EEEEecCCccccchHHHhhcccCCCc-eEEeeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 007166 28 ARKI-LILKTGRSPMGMLGLPFLTRMEGFSA-KIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 105 (615)
Q Consensus 28 ~~~I-aVllSHah~dH~gaLP~L~~~~gf~g-~Iy~T~pT~~l~~lll~D~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 105 (615)
..+| +|||||+|.||+|++|.|.+. |.. +||++..+..... +. . .
T Consensus 75 i~~id~vilTH~H~DHiggl~~l~~~--~~~~~i~~~~~~~~~~~----~~-------------~----~---------- 121 (547)
T 2bib_A 75 VQKLDFILVTHTHSDHIGNVDELLST--YPVDRVYLKKYSDSRIT----NS-------------E----R---------- 121 (547)
T ss_dssp CCCBSCEECCCSCHHHHTTHHHHHHH--SCBSEEECCCCCGGGBS----CG-------------G----G----------
T ss_pred cccccEEEEcCCCccccCCHHHHHHh--CCccEEEECcccccccC----Ch-------------H----H----------
Confidence 4679 999999999999999999876 433 6999876533110 00 0 0
Q ss_pred chhhhhhhhccCCCCCCCCCCchH--HHHHHHHh--cce----eecCCcEEEeCCcEEEEEec---ccc-----------
Q 007166 106 LPSALRKIALGEDGSELGGGCPCI--AHVKDCIS--KVQ----TLRFGEEACYNGILIIKAFS---SGL----------- 163 (615)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~ly--~dv~~~~~--~i~----~v~Y~q~~~l~g~l~it~~~---AGH----------- 163 (615)
.|...+ +++.+.+. .+. .+.-++.+.+ |+++|++++ +.|
T Consensus 122 ------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~-g~~~i~~l~~~~~~h~~~~~~~~~~~ 182 (547)
T 2bib_A 122 ------------------LWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQF-GDMDIQLYNYENETDSSGELKKIWDD 182 (547)
T ss_dssp ------------------CTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEE-TTEEEEEESCSCCBCTTSCBCCBSSG
T ss_pred ------------------HHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEec-CCeeEEEecCccccCccccccccCCC
Confidence 000111 12211111 111 2355678888 468888886 333
Q ss_pred ccceEEEEEEeCCeeEEEecCCCCCCCCCCCCCCCCCCCCCEEEeC
Q 007166 164 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 209 (615)
Q Consensus 164 iLGsa~~~I~~~~~~IvYtgD~s~~~~~~~~~d~~~l~~~DvLI~e 209 (615)
--+|+.+.|+.++.+++|+||..........+ ...+.++|+|++.
T Consensus 183 n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l-~~~~~~~DvLkv~ 227 (547)
T 2bib_A 183 NSNSLISVVKVNGKKIYLGGDLDNVHGAEDKY-GPLIGKVDLMKFN 227 (547)
T ss_dssp GGGCCEEEEEETTEEEEECTTCCSTTSHHHHH-HHHHCCCSEEECT
T ss_pred CCCcEEEEEEECCEEEEecCCccchhhhhhhh-cccccceeEEEec
Confidence 36789999999999999999976431000000 0012378999874
No 63
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.27 E-value=1.4e-06 Score=85.69 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=40.7
Q ss_pred EEeCCcEEEEEeccccccc-------eEEEEEEeCCeeEEEecCCCCCCCCCCCCC-CCCCCCCCEEEeCC
Q 007166 148 ACYNGILIIKAFSSGLDIG-------ACNWIISGAKGNIAYISGSNFASGHAMDFD-YRAIQGSDLILYSD 210 (615)
Q Consensus 148 ~~l~g~l~it~~~AGHiLG-------sa~~~I~~~~~~IvYtgD~s~~~~~~~~~d-~~~l~~~DvLI~es 210 (615)
+++ ++++|+++++-|..+ ++.|.|+.++.+++|+||...... +. ...+.++|+++++.
T Consensus 81 ~~~-~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~----~~~~~~~~~~Dvlil~~ 146 (220)
T 1vjn_A 81 YTV-NGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLT----PAQVEEIGEIDVLLVPV 146 (220)
T ss_dssp EEE-TTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCC----HHHHHHHCCCSEEEEEC
T ss_pred EEE-CCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcch----HHHHHhhCCCCEEEEcC
Confidence 344 468999999999873 478999999999999999653210 00 11235799999986
No 64
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.27 E-value=9.6e-07 Score=89.07 Aligned_cols=113 Identities=7% Similarity=-0.024 Sum_probs=75.2
Q ss_pred Cccccccccch---------hhhcc-cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHH
Q 007166 12 HSQSFLHCQMI---------FIKLY-ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN 80 (615)
Q Consensus 12 ~~~~lldcg~~---------f~~~~-~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~ 80 (615)
+..+|+|+|.. .+... ..+| +|++||.|.||+|+++.+.+ ...+||+++.+.+..+ +..
T Consensus 77 ~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~---~~a~v~~~~~~~~~~~----~~~--- 146 (265)
T 2y8b_A 77 DELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA---AGVATYTSPLTRQLAE----AAG--- 146 (265)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEECHHHHHHHH----HTT---
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhh---CCCeEEECHHHHHHHH----hcc---
Confidence 56789999952 11111 3379 99999999999999999876 2689999998876432 100
Q ss_pred HhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEec
Q 007166 81 MEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 160 (615)
Q Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~ 160 (615)
.. ..+ .+ + .. ..+-++.+.+ |++++....
T Consensus 147 --------~~----------------------------~~~----~~-~-------~~--~~~~~~~~~~-g~~~v~~~~ 175 (265)
T 2y8b_A 147 --------NE----------------------------VPA----HS-L-------KA--LSSSGDVVRF-GPVEVFYPG 175 (265)
T ss_dssp --------CC----------------------------CCS----EE-C-------SS--CSSTTEEEEE-TTEEEEECC
T ss_pred --------cc----------------------------ccc----cc-c-------cc--cCCCCcEEee-cCEEEEecC
Confidence 00 000 00 0 00 0123455665 468887677
Q ss_pred cccccceEEEEEEeCCeeEEEecCCCC
Q 007166 161 SGLDIGACNWIISGAKGNIAYISGSNF 187 (615)
Q Consensus 161 AGHiLGsa~~~I~~~~~~IvYtgD~s~ 187 (615)
.||..|+..+.++ +++++|+||...
T Consensus 176 pGHt~g~~~~~~~--~~~~lf~GD~~~ 200 (265)
T 2y8b_A 176 AAHSGDNLVVYVP--AVRVLFGGCAVH 200 (265)
T ss_dssp SSSSTTCCEEEET--TTTEEEEETTSC
T ss_pred CCCCCCCEEEEec--CCCEEEEccccc
Confidence 8999999999875 468999999553
No 65
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.21 E-value=6.7e-07 Score=87.92 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=42.4
Q ss_pred Cccccccccchh---------hhcccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHH
Q 007166 12 HSQSFLHCQMIF---------IKLYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARI 68 (615)
Q Consensus 12 ~~~~lldcg~~f---------~~~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l 68 (615)
+..+|+|||... ++....+| +|++||.|.||+|+++++.+ +..+||+++.+.++
T Consensus 42 ~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~ 105 (228)
T 1jjt_A 42 AEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNS---RSIPTYASELTNEL 105 (228)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHH---TTCCEEEEHHHHHH
T ss_pred CcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHh---CCCEEEEChHHHHH
Confidence 467899999531 11213389 99999999999999999986 36899999998764
No 66
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=97.93 E-value=4.8e-06 Score=80.17 Aligned_cols=101 Identities=11% Similarity=-0.079 Sum_probs=69.7
Q ss_pred Cccccccccc-h--hhhcc--cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHHHHHHHHHHHHHHHhhhh
Q 007166 12 HSQSFLHCQM-I--FIKLY--ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQ 85 (615)
Q Consensus 12 ~~~~lldcg~-~--f~~~~--~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l~~lll~D~~~~~~~~~~ 85 (615)
+..+|+|||. . +.+.. ..+| +|++||. ||+|+++.+.+. |..+||+++.+.+..+
T Consensus 33 ~~~iliD~g~~~~~~~~~l~~~g~i~~ii~TH~--DH~gg~~~~~~~--~~a~v~~~~~~~~~~~--------------- 93 (201)
T 2p97_A 33 EGNILIDPVALSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQ--TYTKIAGPVAEKENFP--------------- 93 (201)
T ss_dssp TCCEEESCCCCCHHHHHHHHHTTCCSEEECSSG--GGCTTHHHHHHH--SCCEEEEEGGGTTSCS---------------
T ss_pred CeeEEEECCCCcHHHHHHHHhcCCCCEEEECCc--hhhhhHHHHHHh--cCCEEEEcHhHhhhhc---------------
Confidence 5679999993 1 11111 3389 9999999 999999999886 4599999976532100
Q ss_pred hcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhcceeecCCcEEEeCCcEEEEEecccccc
Q 007166 86 FYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 165 (615)
Q Consensus 86 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~dv~~~~~~i~~v~Y~q~~~l~g~l~it~~~AGHiL 165 (615)
. + ....++-++.+ .+.+++...++||..
T Consensus 94 -----------------------------------~-----~----------~~~~~~~g~~~--~~~~~~~~~p~gHt~ 121 (201)
T 2p97_A 94 -----------------------------------I-----Y----------CDRWLSDGDEL--VPGLKVMELQGSKTP 121 (201)
T ss_dssp -----------------------------------S-----C----------CSEEECTTCBS--STTEEEEEECSSSST
T ss_pred -----------------------------------c-----c----------CceecCCCCEE--cceEEEEECCCCCCC
Confidence 0 0 01122223332 235888888999999
Q ss_pred ceEEEEEEeCCeeEEEecCCC
Q 007166 166 GACNWIISGAKGNIAYISGSN 186 (615)
Q Consensus 166 Gsa~~~I~~~~~~IvYtgD~s 186 (615)
|+..+.++ + +++|+||..
T Consensus 122 g~~~~~~~--~-~~lf~GD~~ 139 (201)
T 2p97_A 122 GELALLLE--E-TTLITGDLV 139 (201)
T ss_dssp TEEEEEET--T-TEEEECSSE
T ss_pred CcEEEEEc--C-CEEEECccc
Confidence 99999886 3 899999954
No 67
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=97.84 E-value=1.1e-05 Score=81.55 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=41.6
Q ss_pred Cccccccccch------hhh---c-ccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHHHH
Q 007166 12 HSQSFLHCQMI------FIK---L-YARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAARI 68 (615)
Q Consensus 12 ~~~~lldcg~~------f~~---~-~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~~l 68 (615)
++-+|+|+|.. ..+ . ...+| +|++||.|.||+||++++.+. ..+||+++.+.++
T Consensus 84 ~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~ 148 (270)
T 4eyb_A 84 GRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSNQL 148 (270)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC---CCeEEECHHHHHH
Confidence 55679998842 111 1 14579 999999999999999999764 5899999988654
No 68
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=97.53 E-value=0.0001 Score=83.80 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=44.0
Q ss_pred Cccccccccchh------hhc----c-cCcE-EEEEecCCccccchHHHhhccc---CCCceEEeeHHHHHHH
Q 007166 12 HSQSFLHCQMIF------IKL----Y-ARKI-LILKTGRSPMGMLGLPFLTRME---GFSAKIYITEAAARIG 69 (615)
Q Consensus 12 ~~~~lldcg~~f------~~~----~-~~~I-aVllSHah~dH~gaLP~L~~~~---gf~g~Iy~T~pT~~l~ 69 (615)
++.+|+|+|... .+. . ..+| +|++||+|.||+||++.+.+.. ....+||+++.+.+..
T Consensus 132 ~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~ 204 (658)
T 2cfu_A 132 SGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAA 204 (658)
T ss_dssp SSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHH
Confidence 567899999632 111 1 5789 9999999999999999997520 2368999999987653
No 69
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=97.33 E-value=5.5e-05 Score=77.00 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=42.4
Q ss_pred Cccccccccchh-----hh---cccCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHHH
Q 007166 12 HSQSFLHCQMIF-----IK---LYARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAAA 66 (615)
Q Consensus 12 ~~~~lldcg~~f-----~~---~~~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT~ 66 (615)
+..+|+|||... .. ..+.+| +|++||.|.||+|++|++.+.+ -+.+||+++.+.
T Consensus 42 ~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~-~~~~v~~~~~~~ 104 (284)
T 2p4z_A 42 NKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERN-PEVKIYTHKEIL 104 (284)
T ss_dssp TEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHC-TTCEEEEEGGGG
T ss_pred CeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHc-CCCceecCHHHH
Confidence 567999999632 11 126689 9999999999999999998642 268999998874
No 70
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=96.33 E-value=0.00094 Score=67.27 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=34.8
Q ss_pred ccccccch--hhhcc----cCcE-EEEEecCCccccchHHHhhcccCCCceEEeeHHH
Q 007166 15 SFLHCQMI--FIKLY----ARKI-LILKTGRSPMGMLGLPFLTRMEGFSAKIYITEAA 65 (615)
Q Consensus 15 ~lldcg~~--f~~~~----~~~I-aVllSHah~dH~gaLP~L~~~~gf~g~Iy~T~pT 65 (615)
+|+|+|.. +.... ..-- +|++||.|.||+|+++.+ ++.+||+.+..
T Consensus 40 iLiD~G~~~~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l-----~~~~v~~~~~~ 92 (267)
T 3h3e_A 40 VLFDTGKSDVFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL-----SGKRVWLRKEA 92 (267)
T ss_dssp EEECCCSSSHHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC-----CSCEEEEEGGG
T ss_pred EEEECCCcHHHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh-----cCCEEEECHHH
Confidence 89999964 22221 2222 799999999999999998 46899998755
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=94.32 E-value=0.0029 Score=71.85 Aligned_cols=56 Identities=5% Similarity=-0.018 Sum_probs=42.0
Q ss_pred Cccccccccchh------hh---c--ccCcE-EEEEecCCccccchHHHhhccc---CCCceEEeeHHHHH
Q 007166 12 HSQSFLHCQMIF------IK---L--YARKI-LILKTGRSPMGMLGLPFLTRME---GFSAKIYITEAAAR 67 (615)
Q Consensus 12 ~~~~lldcg~~f------~~---~--~~~~I-aVllSHah~dH~gaLP~L~~~~---gf~g~Iy~T~pT~~ 67 (615)
++.+|+|||... .+ . ...+| +|++||+|.||+||++.+.+.. .+..+||+++.+.+
T Consensus 142 ~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e 212 (668)
T 2yhe_A 142 SGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFME 212 (668)
Confidence 467899999632 11 1 14679 9999999999999999998620 24689999998743
No 72
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=71.30 E-value=3.7 Score=42.44 Aligned_cols=59 Identities=10% Similarity=-0.069 Sum_probs=45.6
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCccc-----ccccc---c-------CCceeeecCCCcEEEeCCCCeeE
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-----VSFSD---V-------TSFSVSHYSENETIHIPSLKESA 480 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~~-----~~~l~---~-------~~~~v~~p~~ge~i~l~~~~~~~ 480 (615)
..|++..+..++++.++|+.++++|...-. .+.+. + .+.+++.++.|+++.+|..++.+
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~~~~ 330 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNF 330 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTTCC
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCCCce
Confidence 469999999999999999999999976421 11221 1 14578999999999999887744
No 73
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=71.07 E-value=3.8 Score=40.24 Aligned_cols=52 Identities=8% Similarity=-0.079 Sum_probs=40.3
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCcc-----cccccc----cCCc--eeeecCCCcEEEe
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRT-----HVSFSD----VTSF--SVSHYSENETIHI 473 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~-----~~~~l~----~~~~--~v~~p~~ge~i~l 473 (615)
..|.+.++..++++.++|+++|++|=..- ..+.++ +.+. ++..|+.||++++
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 56999999999999999999999997642 122222 3444 7899999999875
No 74
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=69.66 E-value=4 Score=42.58 Aligned_cols=59 Identities=10% Similarity=-0.063 Sum_probs=45.3
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCccc-----ccccc---c---C----CceeeecCCCcEEEeCCCCeeE
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-----VSFSD---V---T----SFSVSHYSENETIHIPSLKESA 480 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~~-----~~~l~---~---~----~~~v~~p~~ge~i~l~~~~~~~ 480 (615)
..|.+..+..++++.++|+.++++|..+-. .+.++ + . +.+++.++.|+++++|..++.+
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~d~~~~ 355 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDKGRM 355 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTTCC
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEecCCCCce
Confidence 569999999999999999999999976421 11221 1 1 4578899999999999877643
No 75
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=47.30 E-value=34 Score=32.65 Aligned_cols=37 Identities=8% Similarity=0.025 Sum_probs=29.5
Q ss_pred ecccCCCHhhHHHHHHhcCCCEEEEeccCcccccccc
Q 007166 420 SFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD 456 (615)
Q Consensus 420 ~fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~~~l~ 456 (615)
.-..|.+.++..++++.++|++++++|=.....+.++
T Consensus 183 ~~~~h~~~~ea~~~~~~l~~k~vip~H~~~~~~~~~~ 219 (235)
T 3kl7_A 183 NQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELK 219 (235)
T ss_dssp CTTTSCCHHHHHHHHHHHCCSEEEEESCTTCCTTHHH
T ss_pred CCCcccCHHHHHHHHHHcCCCEEEEEcCCCCCHHHHH
Confidence 3457999999999999999999999997664444443
No 76
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=35.56 E-value=36 Score=33.81 Aligned_cols=58 Identities=7% Similarity=-0.132 Sum_probs=42.2
Q ss_pred cccCCCHhhHHHHHHhcCCCEEEEeccCccccc----ccc----cCCceeeecCCCcEEEeCCCCe
Q 007166 421 FLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS----FSD----VTSFSVSHYSENETIHIPSLKE 478 (615)
Q Consensus 421 fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~~----~l~----~~~~~v~~p~~ge~i~l~~~~~ 478 (615)
-.+|+...+..+++++.+|+++|+.|=.+.... .+. +....+..+..|++++++....
T Consensus 244 ~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~~~~~a~dg~~~~l~~~~~ 309 (320)
T 1y44_A 244 DYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNVPRGKL 309 (320)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCSSEEECCTTCEEECCCC--
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCCCcEeccCCCEEEecchhh
Confidence 357999999999999999999999997664321 121 1112578899999999987554
No 77
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=34.35 E-value=38 Score=32.61 Aligned_cols=52 Identities=8% Similarity=-0.012 Sum_probs=38.9
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCccccc---ccc----c--CCceeeecCCCcEEEe
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS---FSD----V--TSFSVSHYSENETIHI 473 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~~~~---~l~----~--~~~~v~~p~~ge~i~l 473 (615)
.+|+...++.+++++++++++++.|=.+.... .+. + .+.++..+..|+++++
T Consensus 220 ~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 220 KNHAAIDEVMESVKAAGVKKVILYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp -CCCBHHHHHHHHHHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEeecCcCcchHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 57999999999999999999999997764321 111 1 3567888888887764
No 78
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=34.32 E-value=39 Score=33.25 Aligned_cols=54 Identities=13% Similarity=0.024 Sum_probs=39.8
Q ss_pred cccCCCHhhHHHHHHhcCCCEEEEeccCcccc-cccc-cCCceeeecCCCcEEEeC
Q 007166 421 FLSGKKLQKVQPLLKILQPKLVLFPEEWRTHV-SFSD-VTSFSVSHYSENETIHIP 474 (615)
Q Consensus 421 fs~haD~~~l~~~i~~l~P~~vilvHG~~~~~-~~l~-~~~~~v~~p~~ge~i~l~ 474 (615)
-..|.+.++..+++++++|+++++.|=.+... +.++ +....+.....|.+|++|
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~~~~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPHHVEPGYDGLRFEVA 292 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHHHHHHSCTTEEECCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHhhcCCCcEEeeCCcEEEec
Confidence 46799999999999999999999999765421 1111 223356777788888876
No 79
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=29.42 E-value=1.2e+02 Score=28.91 Aligned_cols=75 Identities=11% Similarity=0.099 Sum_probs=45.8
Q ss_pred cCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCcEEecCCcchhcccCCCceeeeEEEEeecccCCCHhhHHHHHHhcCC
Q 007166 360 NWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQP 439 (615)
Q Consensus 360 ~~~~P~VV~as~gmL~~G~s~~ll~~~~~d~~N~IIl~g~~~~~~~l~~~~~v~~~v~~~~fs~haD~~~l~~~i~~l~P 439 (615)
...+..++|++.-..........+.. . .-..+|++..+.... .+-.+|.+.++..+++++++|
T Consensus 153 ~~~~~~i~~~GDt~~~~~~~~~~l~~--~-~~Dlli~e~t~~~~~--------------~~~~~H~~~~~a~~~~~~~~~ 215 (258)
T 3g1p_A 153 ETAHSRVAWLSDTAGLPEKTLKFLRN--N-QPQVMVMDCSHPPRA--------------DAPRNHCDLNTVLALNQVIRS 215 (258)
T ss_dssp ECSSCEEEEECSCSSCCHHHHHHHHH--T-CCSEEEEECCBSSCS--------------SCCSSSCBHHHHHHHHHHHCC
T ss_pred EeCCcEEEEECCCCCCCHHHHHHHHh--C-CCCEEEEeCCCCCcc--------------ccCCCCCCHHHHHHHHHHcCC
Confidence 34556788877654333323333321 2 224455554322211 123589999999999999999
Q ss_pred CEEEEeccCccc
Q 007166 440 KLVLFPEEWRTH 451 (615)
Q Consensus 440 ~~vilvHG~~~~ 451 (615)
++++++|=.++.
T Consensus 216 k~lil~H~s~~~ 227 (258)
T 3g1p_A 216 PRVILTHISHQF 227 (258)
T ss_dssp SCEEEESCCHHH
T ss_pred CEEEEECccCcc
Confidence 999999976543
No 80
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=26.69 E-value=88 Score=32.04 Aligned_cols=57 Identities=14% Similarity=0.032 Sum_probs=40.0
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCcccc-------------cccc-c--C---CceeeecCCCcEEEeCCCCe
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRTHV-------------SFSD-V--T---SFSVSHYSENETIHIPSLKE 478 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~~~-------------~~l~-~--~---~~~v~~p~~ge~i~l~~~~~ 478 (615)
.+|+...+..++.+..+++++++.|=.+... +.+. + . +.+++....|++++||...+
T Consensus 287 ~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~~~~~ 362 (368)
T 3zwf_A 287 HGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIPIKKA 362 (368)
T ss_dssp TTCCCHHHHHHHHHHTTCSEEEEECBCCCC---------------------------CEEEECCTTCEEECCC---
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcCCCceEEecCCcEEEeecCcc
Confidence 4699999999999999999999999765543 2232 1 1 22578889999999987554
No 81
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=25.79 E-value=81 Score=30.21 Aligned_cols=51 Identities=12% Similarity=-0.117 Sum_probs=35.5
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCccc-ccccc----c-CCceeeecCCCcEEE
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRTH-VSFSD----V-TSFSVSHYSENETIH 472 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~~-~~~l~----~-~~~~v~~p~~ge~i~ 472 (615)
.+|....++.+++++.+|+++++.|-.+.. .+.+. + .+.++..+..|++++
T Consensus 211 ~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~~~~~~~~~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 211 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWN 267 (268)
T ss_dssp GTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHHHHTTCCSEEEECCTTCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHHHHHHHHhCCCCEEEEeCCcccc
Confidence 359999999999999999999999976532 11111 1 233566777776653
No 82
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=24.24 E-value=61 Score=30.54 Aligned_cols=29 Identities=7% Similarity=0.022 Sum_probs=25.8
Q ss_pred ccCCCHhhHHHHHHhcCCCEEEEeccCcc
Q 007166 422 LSGKKLQKVQPLLKILQPKLVLFPEEWRT 450 (615)
Q Consensus 422 s~haD~~~l~~~i~~l~P~~vilvHG~~~ 450 (615)
..|.+.++..+++++++|+.++++|=...
T Consensus 149 ~~h~~~~~a~~~~~~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 149 TYTIGPKEAKEVADLLNAKVIIPMHYKTK 177 (220)
T ss_dssp SSSCCHHHHHHHHHHTTCSEEEEESCCCS
T ss_pred cCcCCHHHHHHHHHhcCCCEEEEEecccc
Confidence 35999999999999999999999997654
Done!