BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007167
(615 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 12/274 (4%)
Query: 307 VLGKGTFGTAYKAALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+LG+G FG YK L D + V VKRLKE G+ +F+ ++E++ H N++ LR +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 365 YSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ E+L+VY Y GSV++ L R E Q LDW R K+
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQA 480
+H +KA+NI L+ + V D E T K+++
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 481 SDVFSFGVLLLELLTGKSP--IHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNI 538
+DVF +GV+LLEL+TG+ + D+ V L+ WV +++E+ + DV+L N
Sbjct: 224 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL--QGNY 281
Query: 539 EEEMVE-MLQVGMACVVRMPEERPKMADVLKMVE 571
++E VE ++QV + C P ERPKM++V++M+E
Sbjct: 282 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 12/274 (4%)
Query: 307 VLGKGTFGTAYKAALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+LG+G FG YK L D V VKRLKE G+ +F+ ++E++ H N++ LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 365 YSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ E+L+VY Y GSV++ L R E Q LDW R K+
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQA 480
+H +KA+NI L+ + V D E T K+++
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 481 SDVFSFGVLLLELLTGKSP--IHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNI 538
+DVF +GV+LLEL+TG+ + D+ V L+ WV +++E+ + DV+L N
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL--QGNY 273
Query: 539 EEEMVE-MLQVGMACVVRMPEERPKMADVLKMVE 571
++E VE ++QV + C P ERPKM++V++M+E
Sbjct: 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 21/282 (7%)
Query: 307 VLGKGTFGTAYKAALEDASTVVVKRLK-EVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
++G G FG YK L D + V +KR E + G EFE ++E + RH ++V+L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
++E +++Y Y E G++ L+G S+ W+ R+ T ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYLHTR---AII 161
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR-----KATQA 480
H +K+ NI L+ ++D D + T+
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE- 539
SDV+SFGV+L E+L +S I + E+V+L W ++ D PN+
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD------PNLAD 275
Query: 540 ----EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
E + + + C+ E+RP M DVL +E R++
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 21/282 (7%)
Query: 307 VLGKGTFGTAYKAALEDASTVVVKRLK-EVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
++G G FG YK L D + V +KR E + G EFE ++E + RH ++V+L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
++E +++Y Y E G++ L+G S+ W+ R+ T ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYLHTR---AII 161
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR-----KATQA 480
H +K+ NI L+ ++D D + T+
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE- 539
SDV+SFGV+L E+L +S I + E+V+L W ++ D PN+
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD------PNLAD 275
Query: 540 ----EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
E + + + C+ E+RP M DVL +E R++
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 117/292 (40%), Gaps = 32/292 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKR---EFEQQMEIVGGIRHENVVALRA 362
E +G G+FGT ++A S V VK L E + EF +++ I+ +RH N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
+V +Y GS+ +LH + + LD R+ N
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQ 479
+VH +K+ N+ ++ + V V D EV + +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP-NI 538
SDV+SFGV+L EL T + P +VV A F + L P N+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGFKCKRLEIPRNL 264
Query: 539 EEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEI 590
++ +++ C P +RP A ++ ++ + +K+ PP NRS++
Sbjct: 265 NPQVAAIIE---GCWTNEPWKRPSFATIMDLLRPL--IKSAVPPP--NRSDL 309
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 32/292 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKR---EFEQQMEIVGGIRHENVVALRA 362
E +G G+FGT ++A S V VK L E + EF +++ I+ +RH N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
+V +Y GS+ +LH + + LD R+ N
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQ 479
+VH +K+ N+ ++ + V V D EV + +
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP-NI 538
SDV+SFGV+L EL T + P +VV A F + L P N+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGFKCKRLEIPRNL 264
Query: 539 EEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEI 590
++ +++ C P +RP A ++ ++ + +K+ PP NRS++
Sbjct: 265 NPQVAAIIE---GCWTNEPWKRPSFATIMDLLRPL--IKSAVPPP--NRSDL 309
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG----KREFEQQMEIVGGIRHENVVALRAY 363
+G+G FG YK + + + V K V++ K++F+Q+++++ +HEN+V L +
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 364 YYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
D+ +VY Y GS+ L +G L W R +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR----KATQ 479
+H IK++NI L+ +SD + T
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITP 213
Query: 480 ASDVFSFGVLLLELLTG 496
SD++SFGV+LLE++TG
Sbjct: 214 KSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG----KREFEQQMEIVGGIRHENVVALRAY 363
+G+G FG YK + + + V K V++ K++F+Q+++++ +HEN+V L +
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 364 YYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
D+ +VY Y GS+ L +G L W R +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR----KATQ 479
+H IK++NI L+ +SD + T
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITP 213
Query: 480 ASDVFSFGVLLLELLTG 496
SD++SFGV+LLE++TG
Sbjct: 214 KSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG----KREFEQQMEIVGGIRHENVVALRAY 363
+G+G FG YK + + + V K V++ K++F+Q+++++ +HEN+V L +
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 364 YYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
D+ +VY Y GS+ L +G L W R +
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH-- 148
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR----KATQ 479
+H IK++NI L+ +SD + T
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITP 207
Query: 480 ASDVFSFGVLLLELLTG 496
SD++SFGV+LLE++TG
Sbjct: 208 KSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 13/196 (6%)
Query: 309 GKGTFGTAYKAALEDASTVVVKRLKEVNVG----KREFEQQMEIVGGIRHENVVALRAYY 364
G+G FG YK + + + V K V++ K++F+Q++++ +HEN+V L +
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 365 YSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
D+ +VY Y GS+ L +G L W R +
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCL--DGTPPLSWHXRCKIAQGAANGINFLHENHH--- 145
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTR----KATQA 480
+H IK++NI L+ +SD + T
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPK 205
Query: 481 SDVFSFGVLLLELLTG 496
SD++SFGV+LLE++TG
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 107/284 (37%), Gaps = 38/284 (13%)
Query: 306 EVLGKGTFGTAYKAALEDAST-----VVVKRLKEVNVGKR--EFEQQMEIVGGIRHENVV 358
+V+G G FG YK L+ +S V +K LK K+ +F + I+G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L +++ +Y E G++ L + GE V
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAGMKYLAN 165
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVT 472
N VH + A NI +NS VSD + E
Sbjct: 166 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 473 DTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVE 531
RK T ASDV+SFG+++ E++T G+ P EV+ + +
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-----------------D 265
Query: 532 LLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
R P + + Q+ M C + RPK AD++ +++ + R
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 31/264 (11%)
Query: 286 VFFEGCNLVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGK------ 339
VF E ++ FD ++LRA +GKG+FG ++ T + +K +N K
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNE 58
Query: 340 -REFEQQMEIVGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLD 398
R ++++I+ G+ H +V L + +++ MV D G + L Q ++
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-------QQNVH 111
Query: 399 WDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXX 456
+ +N +++H +K NI L+ GHV ++D I
Sbjct: 112 FKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 457 XXXXXXXXXXXXXEVTDTRKATQAS---DVFSFGVLLLELLTGKSPIH---ATGGDEVVH 510
E+ +RK S D +S GV ELL G+ P H +T E+VH
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH 230
Query: 511 LVRWVNSVVREEWTAEVFDVELLR 534
W+ E+ V LL+
Sbjct: 231 TFETTVVTYPSAWSQEM--VSLLK 252
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 30/275 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
EV+G+G FG KA A V +K++ E ++ F ++ + + H N+V L Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRG----EGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
+ +V +Y E GS+ +LHG ++ W + +
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQP 123
Query: 422 GKLVHGGIKASNIFLNSQGHVC-VSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
L+H +K N+ L + G V + D EV + ++
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DVFS+G++L E++T + P GG R W R P I+
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGG-----------PAFRIMWAVH----NGTRPPLIKN 228
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
+ + C + P +RP M +++K++ + R
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 30/275 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
EV+G+G FG KA A V +K++ E ++ F ++ + + H N+V L Y
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKL--YGA 70
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRG----EGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
+ +V +Y E GS+ +LHG ++ W +
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA---- 126
Query: 422 GKLVHGGIKASNIFLNSQGHVC-VSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
L+H +K N+ L + G V + D EV + ++
Sbjct: 127 --LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DVFS+G++L E++T + P GG R W R P I+
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGG-----------PAFRIMWAVH----NGTRPPLIKN 229
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
+ + C + P +RP M +++K++ + R
Sbjct: 230 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 22/222 (9%)
Query: 292 NLVFD-LEDLLRASAEVLGKGTFGTAYKA-ALEDASTVVVKRLKEVNVGKREFEQ---QM 346
NL F +E +R + +G+G+FG A + ED V+K + + +E E+ ++
Sbjct: 17 NLYFQSMEKYVRL--QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREV 74
Query: 347 EIVGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRG---EGQSSLDWDTRV 403
++ ++H N+V R + +V DY E G + ++ ++G + LDW ++
Sbjct: 75 AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 404 XXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXX 463
+ K++H IK+ NIFL G V + D
Sbjct: 135 CLALKHV---------HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185
Query: 464 X---XXXXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHA 502
E+ + + SD+++ G +L EL T K A
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 118/303 (38%), Gaps = 45/303 (14%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 127
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
D++S GVL E L GK P A E + R E+T F E R
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------ 235
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISSSAATPKAT 600
+++ L + P +RP + +VL E+P T N S+ S+S A+
Sbjct: 236 DLISRL------LKHNPSQRPMLREVL-----------EHPWITANSSKPSNSQNKESAS 278
Query: 601 ETA 603
+ +
Sbjct: 279 KQS 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A +++ ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHA 502
D++S GVL E L GK P A
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 152
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
D++S GVL E L GK P A E + R E+T F E R
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------ 234
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLK 568
+++ L + P +RP + +VL+
Sbjct: 235 DLISRL------LKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 152
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 143
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 125
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQET 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 306 EVLGKGTFGTAYKA-ALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHENVVALR 361
E++G G FG Y+A + D V R ++++ Q+ ++ ++H N++ALR
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
+ +V ++ G ++ +L G+R ++W ++ E
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEAI 126
Query: 422 GKLVHGGIKASNIFL--------NSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX-EVT 472
++H +K+SNI + S + ++D EV
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 473 DTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLV 512
++ SDV+S+GVLL ELLTG+ P G V + V
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 34/268 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 131
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E + R +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
D++S GVL E L GK P A E + R E+T F E R
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------ 239
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLK 568
+++ L + P +RP + +VL+
Sbjct: 240 DLISRL------LKHNPSQRPXLREVLE 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 128
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 127
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 127
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 131
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
D++S GVL E L GK P A E + R E+T F E R
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------ 237
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLK 568
+++ L + P +RP + +VL+
Sbjct: 238 DLISRL------LKHNPSQRPMLREVLE 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G V L + + Q + + T + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC---------HS 131
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 37/277 (13%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFE---QQMEIVGGIRHENVVALRAYY 364
+G G+FGT YK V VK LK V+ +F+ ++ ++ RH N++ Y
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 365 YSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+KD +V + E S+ LH + + Q D + +
Sbjct: 102 -TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-------ARQTAQGMDYLHAKNI 153
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTDTRK 476
+H +K++NIFL+ V + D + D
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 477 ATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV-RWVNSVVREEWTAEVFDVELLR 534
+ SDV+S+G++L EL+TG+ P H D+++ +V R S D+ L
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP----------DLSKL- 262
Query: 535 YPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVE 571
Y N + M ++ CV ++ EERP +L +E
Sbjct: 263 YKNCPKAMKRLV---ADCVKKVKEERPLFPQILSSIE 296
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 131
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
D++S GVL E L GK P A E + R E+T F E R
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------ 239
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLK 568
+++ L + P +RP + +VL+
Sbjct: 240 DLISRL------LKHNPSQRPMLREVLE 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 130
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQET 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 126
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G V L + + Q + + T + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC---------HS 131
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 163
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 164 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 264
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 265 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 317
Query: 593 SAATP 597
+AA P
Sbjct: 318 AAARP 322
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 136
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 137 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 237
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 290
Query: 593 SAATP 597
+AA P
Sbjct: 291 AAARP 295
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 123
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQET 211
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V +Y E GS+ + L R+ + Q ++ ++ ++
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 153
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 154 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 254
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 307
Query: 593 SAATP 597
+AA P
Sbjct: 308 AAARP 312
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 128
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + +++ E+ + R +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 107/291 (36%), Gaps = 50/291 (17%)
Query: 308 LGKGTFGTAYKAAL------EDASTVVVKRLKEVNVGKR-EFEQQMEIVGGIRHENVVAL 360
LG+G FG + A +D V VK LK+ + R +F+++ E++ ++HE++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAML--HG-----------RRGEGQSSLDWDTRVXXXX 407
D +MV++Y + G ++ L HG R+ +G+ L +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 408 XXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX 467
VH + N + + V + D
Sbjct: 143 ASGMVYLASQ-----HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 468 XX-----EVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVRE 521
E RK T SDV+SFGV+L E+ T GK P EV+ + + R
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
Query: 522 EWT-AEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVE 571
EV+DV L C R P++R + ++ K++
Sbjct: 258 RVCPKEVYDVML------------------GCWQREPQQRLNIKEIYKILH 290
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 97/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK N+ F Q+ +++ +RHE +V L A S+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 305
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 408
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 409 ESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L + + Q + + T + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---------HS 129
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + +++ E+ + R +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++S GVL E L GK P A E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 16/202 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L R + Q + + T + +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYC---------HS 130
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 481 SDVFSFGVLLLELLTGKSPIHA 502
D++S GVL E L G P A
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEA 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 35/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + A + V VK +K ++ F + ++ ++H+ +V L A +K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 81
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQ---SSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ ++ ++ GS+ L G Q +D+ ++
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---------NY 132
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQA 480
+H ++A+NI +++ ++D E + T
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 481 SDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
SDV+SFG+LL+E++T G+ P EV+ + R P E
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-----------------RGYRMPRPE 235
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
E+ + M C PEERP + +++D
Sbjct: 236 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 37/270 (13%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + A + V VK +K ++ F + ++ ++H+ +V L A +K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 248
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQ---SSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ ++ ++ GS+ L G Q +D+ ++
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---------NY 299
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVF 484
+H ++A+NI +++ ++D E + T SDV+
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAP------EAINFGSFTIKSDVW 353
Query: 485 SFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMV 543
SFG+LL+E++T G+ P EV+ + R P E
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVIRALE-----------------RGYRMPRPENCPE 396
Query: 544 EMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ + M C PEERP + +++D
Sbjct: 397 ELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 140
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 141 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 198
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 257
Query: 533 LRYPNIE 539
++P I+
Sbjct: 258 FKFPQIK 264
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 152
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 153 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 210
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 269
Query: 533 LRYPNIE 539
++P I+
Sbjct: 270 FKFPQIK 276
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 16/202 (7%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + ++ +K L + + K E Q+ EI +RH N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG-RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y++ ++ +Y G+V L R + Q + + T + +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYC---------HS 130
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
+++H IK N+ L S G + ++D E+ + R +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 481 SDVFSFGVLLLELLTGKSPIHA 502
D++S GVL E L G P A
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 140 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 533 LRYPNIE 539
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 151
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 152 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 268
Query: 533 LRYPNIE 539
++P I+
Sbjct: 269 FKFPQIK 275
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 158
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 159 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 216
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 275
Query: 533 LRYPNIE 539
++P I+
Sbjct: 276 FKFPQIK 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 147
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 148 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 205
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 264
Query: 533 LRYPNIE 539
++P I+
Sbjct: 265 FKFPQIK 271
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 37/265 (13%)
Query: 306 EVLGKGTFGTAYKAALEDASTVV-VKRLK-EVNVGKREFEQQME----IVGGIRHENVVA 359
++LGKG+FG + A + + +K LK +V + + E M + H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
+ + +K+ V +Y G + M H QS +D
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDL--MYHI-----QSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX---XXXXXEVTDTRK 476
+ G +V+ +K NI L+ GH+ ++D E+ +K
Sbjct: 136 SKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 477 ATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
+ D +SFGVLL E+L G+SP H +E+ H +R N YP
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF----------------YP 238
Query: 537 N-IEEEMVEMLQVGMACVVRMPEER 560
+E+E ++L + VR PE+R
Sbjct: 239 RWLEKEAKDLL---VKLFVREPEKR 260
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 140 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 533 LRYPNIE 539
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 20/229 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V GK ++++I+ + H N+V LR ++Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 141 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREE 522
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 174
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 175 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 232
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291
Query: 534 RYPNIE 539
++P I+
Sbjct: 292 KFPQIK 297
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-----IYVKLYMYQLFRSLAY 137
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
+ + H IK N+ L+ V C E +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 533 LRYPNIE 539
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-----IYVKLYMYQLFRSLAY 137
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
+ + H IK N+ L+ V C E +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 533 LRYPNIE 539
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 174
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 175 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291
Query: 534 RYPNIE 539
++P I+
Sbjct: 292 KFPQIK 297
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 37/265 (13%)
Query: 306 EVLGKGTFGTAYKAALEDASTVV-VKRLK-EVNVGKREFEQQME----IVGGIRHENVVA 359
++LGKG+FG + A + + +K LK +V + + E M + H +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
+ + +K+ V +Y G + M H QS +D
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDL--MYHI-----QSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX---XXXXXEVTDTRK 476
+ G +V+ +K NI L+ GH+ ++D E+ +K
Sbjct: 137 SKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 477 ATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
+ D +SFGVLL E+L G+SP H +E+ H +R N YP
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF----------------YP 239
Query: 537 N-IEEEMVEMLQVGMACVVRMPEER 560
+E+E ++L + VR PE+R
Sbjct: 240 RWLEKEAKDLL---VKLFVREPEKR 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 387
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 490
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 176
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 177 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 234
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 293
Query: 534 RYPNIE 539
++P I+
Sbjct: 294 KFPQIK 299
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 152
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 153 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 269
Query: 534 RYPNIE 539
++P I+
Sbjct: 270 KFPQIK 275
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 34/286 (11%)
Query: 296 DLEDLLRASAEV---LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGI 352
D+ ++ R S ++ LG G FG + + V +K LK + F ++ +I+ +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 353 RHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXX 412
+H+ +V L A S++ +V +Y GS+ L + GEG+ +L V
Sbjct: 62 KHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFL--KDGEGR-ALKLPNLVDMAAQVAAG 117
Query: 413 XXXXXTENGGKLVHGGIKASNIFLNSQGHVC-VSDIXXXXXXXXXXXXXXXXXXX----X 467
N +H ++++NI + + G +C ++D
Sbjct: 118 MAYIERMN---YIHRDLRSANILVGN-GLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 468 XXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAE 526
E + T SDV+SFG+LL EL+T G+ P EV+ V
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE------------- 220
Query: 527 VFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
R P ++ + + ++ + C + PEERP + +ED
Sbjct: 221 ----RGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V GK ++++I+ + H N+V LR ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 140 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 533 LRYPNIE 539
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 365 YSKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
YS EK +V DY H R + + + V
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 143
Query: 419 ENGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDT 474
G + H IK N+ L+ V C E +
Sbjct: 144 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 201
Query: 475 RKATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 260
Query: 533 LRYPNIE 539
++P I+
Sbjct: 261 FKFPQIK 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 145
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 146 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 203
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 262
Query: 534 RYPNIE 539
++P I+
Sbjct: 263 KFPQIK 268
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 114/300 (38%), Gaps = 41/300 (13%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ V +K LK + +R+F + I+G H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +++ +Y E GS+ A L R+ +G+ ++ +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV-----IQLVGMLRGIGSGMKYL 126
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEVTD 473
+ VH + A NI +NS VSD E
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G+++ E+++ G+ P +V+ + E
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 229
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + + Q+ + C + +RPK ++ M++ + R NP S + SS
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR----NPNSLKRTGSESS 285
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 114/300 (38%), Gaps = 41/300 (13%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ V +K LK + +R+F + I+G H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +++ +Y E GS+ A L R+ +G+ ++ +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV-----IQLVGMLRGIGSGMKYL 147
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEVTD 473
+ VH + A NI +NS VSD E
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G+++ E+++ G+ P +V+ + E
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 250
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + + Q+ + C + +RPK ++ M++ + R NP S + SS
Sbjct: 251 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR----NPNSLKRTGSESS 306
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 178
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 179 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 236
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 295
Query: 534 RYPNIE 539
++P I+
Sbjct: 296 KFPQIK 301
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 20/229 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V GK ++++I+ + H N+V LR ++Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 141 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREE 522
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 168
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 169 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 226
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 285
Query: 534 RYPNIE 539
++P I+
Sbjct: 286 KFPQIK 291
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+V+G G+FG Y+A L D+ +V +K+V KR ++++I+ + H N+V LR ++Y
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 366 SKDEKL------MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
S EK +V DY H R + + + V
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 219
Query: 420 NGGKLVHGGIKASNIFLNSQGHV---CVSDIXXXXXXXXXXXXXXXXXXXXXXE-VTDTR 475
G + H IK N+ L+ V C E +
Sbjct: 220 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 277
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHA--TGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
T + DV+S G +L ELL G+ PI +G D++V +++ + + RE+ +
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 336
Query: 534 RYPNIE 539
++P I+
Sbjct: 337 KFPQIK 342
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ IRHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 407
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 114/300 (38%), Gaps = 41/300 (13%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ V +K LK + +R+F + I+G H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +++ +Y E GS+ A L R+ +G+ ++ +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV-----IQLVGMLRGIGSGMKYL 132
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEVTD 473
+ VH + A NI +NS VSD E
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G+++ E+++ G+ P +V+ + E
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 235
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + + Q+ + C + +RPK ++ M++ + R NP S + SS
Sbjct: 236 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR----NPNSLKRTGSESS 291
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 407
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 131
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 192 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 234
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 235 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 26/278 (9%)
Query: 306 EVLGKGTFGT---AYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
EV+G G AY A ++ + L++ E ++++ + H N+V+
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG--RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+ KDE +V GSV ++ +GE +S + ++ + +N
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX--------XXEVT 472
G +H +KA NI L G V ++D EV
Sbjct: 136 GQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 473 D-TRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVE 531
+ R +D++SFG+ +EL TG +P H +V+ L + E V D E
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDKE 250
Query: 532 LL-RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLK 568
+L +Y +M+ + C+ + PE+RP A++L+
Sbjct: 251 MLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 97/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 128
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 231
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 232 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXX----XXXXXXXXXXXXXXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 238
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 35/274 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + A + V VK +K ++ F + ++ ++H+ +V L A +K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 254
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQ---SSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ ++ ++ GS+ L G Q +D+ ++
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---------NY 305
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQA 480
+H ++A+NI +++ ++D E + T
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 481 SDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
SDV+SFG+LL+E++T G+ P EV+ + R P E
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-----------------RGYRMPRPE 408
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ + M C PEERP + +++D
Sbjct: 409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 238
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 17/245 (6%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFE-----QQMEIVGGIRHENVVAL 360
E LG GT+ T YK + +T V LKEV + E +++ ++ ++HEN+V L
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+++++ +V+++ + M G L+ + V EN
Sbjct: 69 YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL-VKYFQWQLLQGLAFCHEN 127
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRK 476
K++H +K N+ +N +G + + D D +R
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 477 ATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY- 535
+ + D++S G +L E++TGK T +E + L+ + E V +L +Y
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV--TKLPKYN 243
Query: 536 PNIEE 540
PNI++
Sbjct: 244 PNIQQ 248
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 26/278 (9%)
Query: 306 EVLGKGTFGT---AYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
EV+G G AY A ++ + L++ E ++++ + H N+V+
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHG--RRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+ KDE +V GSV ++ +GE +S + ++ + +N
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX--------XXEVT 472
G +H +KA NI L G V ++D EV
Sbjct: 141 GQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 473 D-TRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVE 531
+ R +D++SFG+ +EL TG +P H +V+ L + E V D E
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDKE 255
Query: 532 LL-RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLK 568
+L +Y +M+ + C+ + PE+RP A++L+
Sbjct: 256 MLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V + E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 127
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 129
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 407
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 109/282 (38%), Gaps = 37/282 (13%)
Query: 307 VLGKGTFGTAYKAALEDAST----VVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVAL 360
V+G G FG L+ V +K LK +R+F + I+G H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
++V +Y E GS+ L ++ +GQ ++ ++ ++
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTV---IQLVGMLRGISAGMKYLSDM 143
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTDT 474
G VH + A NI +NS VSD + E
Sbjct: 144 G--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
RK T ASDV+S+G+++ E+++ G+ P +V+ V E
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE-----------------EGY 244
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
R P+ + + Q+ + C + RPK +++ M++ + R
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 10/197 (5%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG+G++G+ YKA ++ +V + V +E +++ I+ +VV Y+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+ +V +Y GSVS ++ R +L D + + +
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYL---HFMRKI 147
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQASD 482
H IKA NI LN++GH ++D EV +D
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 483 VFSFGVLLLELLTGKSP 499
++S G+ +E+ GK P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 308 LGKGTFGTAYKAAL-EDASTVVVKRL--------KEVNVGKREFEQQMEIVGGIRHENVV 358
+GKG FG +K L +D S V +K L E+ +EF++++ I+ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L Y + MV ++ G L+ R + + W ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGD----LYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 419 ENGGKLVHGGIKASNIFLNS---QGHVC--VSDIXXXXXXXXXXXXXXXXXXXXXXEV-- 471
+N +VH +++ NIFL S VC V+D E
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVH-LVRWVNSVVREEWTAEVFDV 530
+ T+ +D +SF ++L +LTG+ P DE + ++++N ++REE
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFIN-MIREEG------- 246
Query: 531 ELLRYPNIEEEMVEMLQ-VGMACVVRMPEERPKMADVLKMVEDI 573
LR P I E+ L+ V C P++RP + ++K + ++
Sbjct: 247 --LR-PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V + E GS+ + L R+ + Q ++ ++ ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 165
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 166 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 266
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 319
Query: 593 SAATP 597
+AA P
Sbjct: 320 AAARP 324
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 14/206 (6%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFEQQM----EIVGGIRHENVVALRA 362
LGKG FG Y A + + +V +K L + + K E Q+ EI + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
Y+Y + ++ +Y G + L Q S +D + +G
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL-------QKSCTFDEQRTATIMEELADALMYC-HGK 142
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQAS 481
K++H IK N+ L +G + ++D E+ + R +
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 482 DVFSFGVLLLELLTGKSPIHATGGDE 507
D++ GVL ELL G P + +E
Sbjct: 203 DLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 308 LGKGTFGTAYKAAL-EDASTVVVKRL--------KEVNVGKREFEQQMEIVGGIRHENVV 358
+GKG FG +K L +D S V +K L E+ +EF++++ I+ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L Y + MV ++ G L+ R + + W ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGD----LYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 419 ENGGKLVHGGIKASNIFLNS---QGHVC--VSDIXXXXXXXXXXXXXXXXXXXXXXEV-- 471
+N +VH +++ NIFL S VC V+D E
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVH-LVRWVNSVVREEWTAEVFDV 530
+ T+ +D +SF ++L +LTG+ P DE + ++++N ++REE
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFIN-MIREEG------- 246
Query: 531 ELLRYPNIEEEMVEMLQ-VGMACVVRMPEERPKMADVLKMVEDI 573
LR P I E+ L+ V C P++RP + ++K + ++
Sbjct: 247 --LR-PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ S +V +K LK +R+F + I+G H N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L ++V + E GS+ + L R+ + Q ++ ++ ++
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYLSD 136
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTD 473
G VH + A NI +NS VSD + E
Sbjct: 137 MG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 474 TRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
RK T ASDV+S+G++L E+++ G+ P +V+ V E
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----------------EG 237
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPSTENRSEISS 592
R P + + Q+ + C + RPK ++ +++ + R NP S + I+S
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR----NPGSLKI---ITS 290
Query: 593 SAATP 597
+AA P
Sbjct: 291 AAARP 295
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 308 LGKGTFGTAYKAAL-EDASTVVVKRL--------KEVNVGKREFEQQMEIVGGIRHENVV 358
+GKG FG +K L +D S V +K L E+ +EF++++ I+ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L Y + MV ++ G L+ R + + W ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGD----LYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 419 ENGGKLVHGGIKASNIFLNS---QGHVC--VSDIXXXXXXXXXXXXXXXXXXXXXXEV-- 471
+N +VH +++ NIFL S VC V+D E
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVH-LVRWVNSVVREEWTAEVFDV 530
+ T+ +D +SF ++L +LTG+ P DE + ++++N ++REE
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFIN-MIREEG------- 246
Query: 531 ELLRYPNIEEEMVEMLQ-VGMACVVRMPEERPKMADVLKMVEDI 573
LR P I E+ L+ V C P++RP + ++K + ++
Sbjct: 247 --LR-PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 306 EVLGKGTFGTAY---KAALEDASTV-VVKRLKEVNVGKRE---FEQQMEIVGGIRHENVV 358
+VLG+G+FG + K + DA + +K LK+ + R+ + + +I+ + H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L + ++ + ++ D+ G + L + + + V
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTR 475
G +++ +K NI L+ +GH+ ++D EV + R
Sbjct: 144 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLV 512
TQ++D +SFGVL+ E+LTG P E + ++
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 37/282 (13%)
Query: 307 VLGKGTFGTAYKAALE-DASTVVVKRLKEVNVG-----KREFEQQMEIVGGIRHENVVAL 360
V+G G FG L+ V +K + VG +R+F + I+G H NVV L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
++V ++ E G++ A L R+ +GQ ++ ++ +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTV---IQLVGMLRGIAAGMRYLADM 164
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVTDT 474
G VH + A NI +NS VSD I E
Sbjct: 165 G--YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
RK T ASDV+S+G+++ E+++ G+ P +V+ + E
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EGY 265
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
R P + + Q+ + C + ERPK ++ +++ + R
Sbjct: 266 RLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 95/270 (35%), Gaps = 29/270 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y GS+ L G G+ L V N VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
+ A+NI + V+D E + T SDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEM 542
+SFG+LL EL T G+ P EV+ V R P E
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------------RGYRMPCPPECP 241
Query: 543 VEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + C + PEERP + +ED
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y G + L G G+ L V N VH
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 12/210 (5%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG+G FG + + V +K LK + F Q+ +++ +RHE +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
+ +V +Y G + L G G+ L V N VH
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASDV 483
++A+NI + V+D E + T SDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+SFG+LL EL T G+ P EV+ V
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 306 EVLGKGTFGTAY---KAALEDASTV-VVKRLKEVNVGKRE---FEQQMEIVGGIRHENVV 358
+VLG+G+FG + K + DA + +K LK+ + R+ + + +I+ + H +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L + ++ + ++ D+ G + L + + + V
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDHLH 144
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTR 475
G +++ +K NI L+ +GH+ ++D EV + R
Sbjct: 145 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLV 512
TQ++D +SFGVL+ E+LTG P E + ++
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 306 EVLGKGTFGTAY---KAALEDASTV-VVKRLKEVNVGKRE---FEQQMEIVGGIRHENVV 358
+VLG+G+FG + K + DA + +K LK+ + R+ + + +I+ + H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L + ++ + ++ D+ G + L + + + V
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTR 475
G +++ +K NI L+ +GH+ ++D EV + R
Sbjct: 144 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLV 512
TQ++D +SFGVL+ E+LTG P E + ++
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 303 ASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
+ +V+G G+FG ++A L ++ V +K++ + KR ++++I+ ++H NVV L+A
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ---DKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 363 YYYSKDEK 370
++YS +K
Sbjct: 100 FFYSNGDK 107
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 24/226 (10%)
Query: 308 LGKGTFGTAYKAAL------EDASTVVVKRLKEV-NVGKREFEQQMEIVGGIRHENVVAL 360
LG+G FG + A +D V VK LK+ + +++F ++ E++ ++HE++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAML--HG------RRGEGQSSLDWDTRVXXXXXXXXX 412
D +MV++Y + G ++ L HG G + L +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 413 XXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--- 469
+++ VH + N + V + D
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 470 --EVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
E RK T SDV+S GV+L E+ T GK P + +EV+ +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 243
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 86
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 246
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 247 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 276
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK---- 136
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 137 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 85
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 245
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 246 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 83
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 243
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 29/272 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 73
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 127
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 233
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
E+ +++++ C PE+RP + ++ED
Sbjct: 234 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 262
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 79
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 133
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 239
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 240 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 87
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 247
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 248 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 277
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 43/298 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEVNVGK--REFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ V +K LK K R+F + I+G H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +++ ++ E GS+ + L R+ +GQ ++ +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV-----IQLVGMLRGIAAGMKYL 125
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEV 471
VH + A NI +NS VSD E
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
RK T ASDV+S+G+++ E+++ G+ P +V++ +
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------------- 228
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVL----KMVEDIRRVKAENPPST 584
+ R P + + Q+ + C + RPK ++ KM+ + +KA P S+
Sbjct: 229 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSS 286
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 42/290 (14%)
Query: 293 LVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQ----QMEI 348
L +D E VLGKGT+G Y A D S V +KE+ + Q ++ +
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVY--AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 349 VGGIRHENVVALRAYYYSKDEKLMVYDYFEP---GSVSAMLHGRRGEGQSSLDWDTRVXX 405
++H+N+V Y S E + + E GS+SA+L + G + D + +
Sbjct: 73 HKHLKHKNIVQ---YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK---DNEQTIGF 126
Query: 406 XXXXXXXXXXXXTENGGKLVHGGIKASNIFLNS-QGHVCVSDIXXXXXXXXX---XXXXX 461
+N ++VH IK N+ +N+ G + +SD
Sbjct: 127 YTKQILEGLKYLHDN--QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 462 XXXXXXXXEVTDT--RKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVV 519
E+ D R +A+D++S G ++E+ TGK P + G
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG--------------- 229
Query: 520 REEWTAEVFDVELLR-YPNIEEEM-VEMLQVGMACVVRMPEERPKMADVL 567
E A +F V + + +P I E M E + C P++R D+L
Sbjct: 230 --EPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 83
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 243
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 137
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 138 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 246
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 132
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 133 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 241
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 134
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 135 -----RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 243
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 78
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 132
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 238
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 239 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 43/298 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEVNVGK--REFEQQMEIVGGIRHENVVA 359
+V+G G FG L+ V +K LK K R+F + I+G H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +++ ++ E GS+ + L R+ +GQ ++ +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV-----IQLVGMLRGIAAGMKYL 151
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEV 471
VH + A NI +NS VSD E
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
RK T ASDV+S+G+++ E+++ G+ P +V++ +
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------------- 254
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVL----KMVEDIRRVKAENPPST 584
+ R P + + Q+ + C + RPK ++ KM+ + +KA P S+
Sbjct: 255 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSS 312
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 82
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 136
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 242
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 243 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 131
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 132 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 240
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 293 LVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQ----QMEI 348
L +D E VLGKGT+G Y A D S V +KE+ + Q ++ +
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVY--AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 58
Query: 349 VGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXX 408
++H+N+V + + + GS+SA+L + G + D + +
Sbjct: 59 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK---DNEQTIGFYTK 115
Query: 409 XXXXXXXXXTENGGKLVHGGIKASNIFLNS-QGHVCVSDIXXXXXXXXX---XXXXXXXX 464
+N ++VH IK N+ +N+ G + +SD
Sbjct: 116 QILEGLKYLHDN--QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL 173
Query: 465 XXXXXEVTDT--RKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREE 522
E+ D R +A+D++S G ++E+ TGK P + G E
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG-----------------E 216
Query: 523 WTAEVFDVELLR-YPNIEEEM-VEMLQVGMACVVRMPEERPKMADVL 567
A +F V + + +P I E M E + C P++R D+L
Sbjct: 217 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 133
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 134 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 306 EVLGKGTFGTAYKAALE----DASTVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
EV+G G FG + L+ S V +K LK +REF + I+G H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L + +++ ++ E G++ + L R +GQ ++ ++ E
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV---IQLVGMLRGIASGMRYLAE 134
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEV 471
VH + A NI +NS VSD E
Sbjct: 135 M--SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T ASD +S+G+++ E+++ G+ P +V++ +
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 138
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 139 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 247
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 164
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 165 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 29/272 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G FG + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 72
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 126
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 232
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
E+ +++++ C PE+RP + ++ED
Sbjct: 233 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 261
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 139
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 140 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 248
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 136
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 137 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 133
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 134 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 140
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 141 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 249
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 133
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 134 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 151
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 152 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 306 EVLGKGTFGTAYKAALE----DASTVVVKRLK--EVNVGKREFEQQMEIVGGIRHENVVA 359
EV+G G FG + L+ S V +K LK +REF + I+G H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L + +++ ++ E G++ + L R +GQ ++ ++ E
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV---IQLVGMLRGIASGMRYLAE 136
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEV 471
VH + A NI +NS VSD E
Sbjct: 137 M--SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T ASD +S+G+++ E+++ G+ P +V++ +
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 30/221 (13%)
Query: 294 VFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKR--LKEVNVGKREFEQQMEIVGG 351
+F DL+ EVLGKG FG A K + V+V + ++ +R F ++++++
Sbjct: 6 IFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 352 IRHENVVALRAYYYSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXX 410
+ H NV+ Y KD++L + +Y + G++ ++ S W RV
Sbjct: 64 LEHPNVLKFIGVLY-KDKRLNFITEYIKGGTLRGIIKSM----DSQYPWSQRVSFAKDIA 118
Query: 411 XXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---- 466
+ N ++H + + N + +V V+D
Sbjct: 119 SGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 467 -------------XXXEVTDTRKATQASDVFSFGVLLLELL 494
E+ + R + DVFSFG++L E++
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 100/274 (36%), Gaps = 33/274 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + V VK +KE ++ + EF Q+ + + + H +V +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 368 DEKLMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V +Y G + L HG+ E L+ V + +
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---------ESHQFI 126
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N ++ V VSD EV K + S
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV++FG+L+ E+ + GK P EVV V + + R P++
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR---------------PHLAS 231
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDIR 574
+ + Q+ +C +PE+RP +L +E +R
Sbjct: 232 DTI--YQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ +Y GS+ L H R + L + +++
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 151
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 152 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 103/273 (37%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K +KE ++ + +F ++ E++ + H +V L +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V+++ E G +S L +RG ++ L V ++
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---------VI 145
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 250
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + +I
Sbjct: 251 THV--YQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 112/283 (39%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 17 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH ++ + + ++
Sbjct: 75 GYS-TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 129 --IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ + SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSKVR- 239
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E++ R
Sbjct: 240 ---SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 276
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 112/283 (39%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH ++ + + ++
Sbjct: 87 GYS-TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ + SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSKVR- 251
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E++ R
Sbjct: 252 ---SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 308 LGKGTFGTA----YKAALEDASTVV-VKRLKE-VNVGKREFEQQMEIVGGIRHENVVALR 361
LGKG FG+ Y ++ VV VK+L+ R+FE+++EI+ ++H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
YS + ++ ++ GS+ L H R + L + +++
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---- 136
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX------XXXEV 471
+ +H + NI + ++ V + D E
Sbjct: 137 -----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 472 TDTRKATQASDVFSFGVLLLELLT----GKSP----IHATGGDE-----VVHLV 512
K + ASDV+SFGV+L EL T KSP + G D+ V HL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 144
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 205 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 248
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 249 KV--YTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 144
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 205 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 248
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 249 KV--YTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 84/223 (37%), Gaps = 25/223 (11%)
Query: 305 AEVLGKGTFGTAYKAA-LEDASTV----VVKRLKEVNVGKR--EFEQQMEIVGGIRHENV 357
+VLG G FGT YK + + TV +K L E K EF + I+ + H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGE--GQSSLDWDTRVXXXXXXXXXXXX 415
V L S +L V G + +H + Q L+W ++
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER-- 136
Query: 416 XXTENGGKLVHGGIKASNIFLNSQGHVCVSD-----IXXXXXXXXXXXXXXXXXXXXXXE 470
+LVH + A N+ + S HV ++D + E
Sbjct: 137 -------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 471 VTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T SDV+S+GV + EL+T G P E+ L+
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 84/223 (37%), Gaps = 25/223 (11%)
Query: 305 AEVLGKGTFGTAYKAA-LEDASTV----VVKRLKEVNVGKR--EFEQQMEIVGGIRHENV 357
+VLG G FGT YK + + TV +K L E K EF + I+ + H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGE--GQSSLDWDTRVXXXXXXXXXXXX 415
V L S +L V G + +H + Q L+W ++
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER-- 159
Query: 416 XXTENGGKLVHGGIKASNIFLNSQGHVCVSD-----IXXXXXXXXXXXXXXXXXXXXXXE 470
+LVH + A N+ + S HV ++D + E
Sbjct: 160 -------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 471 VTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T SDV+S+GV + EL+T G P E+ L+
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 23/204 (11%)
Query: 308 LGKGTFGTAY---------KAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVV 358
LG G+FG + A++ +V RLK+V E ++ + H ++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE----RLMLSIVTHPFII 69
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLH-GRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ + + M+ DY E G + ++L +R + + V
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL------- 122
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKA 477
+ +++ +K NI L+ GH+ ++D EV T+
Sbjct: 123 --HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPY 180
Query: 478 TQASDVFSFGVLLLELLTGKSPIH 501
++ D +SFG+L+ E+L G +P +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 129
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 190 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 233
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 234 KV--YTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 128
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 189 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 232
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 233 KV--YTIMYSCWHEKADERPTFKILLSNILDV 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 124
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 185 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 228
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 229 KV--YTIMYSCWHEKADERPTFKILLSNILDV 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 102/273 (37%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K ++E + + +F ++ E++ + H +V L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V+++ E G +S L +RG ++ L V ++
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---------VI 125
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 230
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + +I
Sbjct: 231 THV--YQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 102/273 (37%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K ++E + + +F ++ E++ + H +V L +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V+++ E G +S L +RG ++ L V ++
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---------VI 123
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 228
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + +I
Sbjct: 229 THV--YQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 18/209 (8%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG FG Y A + A V+ K E + + +++EI +RH N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 363 YYYSKDEKLMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
Y++ + ++ ++ G + L HGR E +S+ + +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC----------H 131
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQ 479
K++H IK N+ + +G + ++D E+ + + +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++ GVL E L G P + E
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 102/273 (37%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K ++E + + +F ++ E++ + H +V L +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V+++ E G +S L +RG ++ L V ++
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---------VI 128
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 233
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + +I
Sbjct: 234 THV--YQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 129
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 190 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 233
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 234 KV--YTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 31/272 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG V +K +KE ++ + EF ++ +++ + HE +V L +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHG 427
++ +Y G + L R Q T+ E+ + +H
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQ------TQQLLEMCKDVCEAMEYLES-KQFLHR 135
Query: 428 GIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRKATQASDV 483
+ A N +N QG V VSD EV K + SD+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 484 FSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRY-PNIEEE 541
++FGVL+ E+ + GK P R+ NS TAE L Y P++ E
Sbjct: 196 WAFGVLMWEIYSLGKMPYE-----------RFTNSE-----TAEHIAQGLRLYRPHLASE 239
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V + +C +ERP +L + D+
Sbjct: 240 KV--YTIMYSCWHEKADERPTFKILLSNILDV 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 21/206 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQM---EIVGGIRHENVVALRAYY 364
LG G FG YKA ++ S + ++ + + E E M +I+ H N+V L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 365 YSKDEKLMVYDYFEPGSVSA-MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
Y ++ ++ ++ G+V A ML R +S + + K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQI--------QVVCKQTLDALNYLHDNK 155
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXX--------XXXXXXXXEVTDTR 475
++H +KA NI G + ++D E + R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 476 KATQASDVFSFGVLLLELLTGKSPIH 501
+DV+S G+ L+E+ + P H
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 18/209 (8%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG FG Y A + A V+ K E + + +++EI +RH N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 363 YYYSKDEKLMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
Y++ + ++ ++ G + L HGR E +S+ + +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC----------H 131
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQ 479
K++H IK N+ + +G + ++D E+ + + +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++ GVL E L G P + E
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 18/209 (8%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG FG Y A + A V+ K E + + +++EI +RH N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 363 YYYSKDEKLMVYDYFEPGSVSAML--HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
Y++ + ++ ++ G + L HGR E +S+ + +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC----------H 132
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIX-XXXXXXXXXXXXXXXXXXXXXEVTDTRKATQ 479
K++H IK N+ + +G + ++D E+ + + +
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGGDEV 508
D++ GVL E L G P + E
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/268 (17%), Positives = 107/268 (39%), Gaps = 31/268 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 143
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 202
Query: 481 SDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
SD++S G+ L+E+ G+ PI +G + L+ ++ + + + VF +E + N
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN-- 260
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVL 567
C+++ P ER + ++
Sbjct: 261 -----------KCLIKNPAERADLKQLM 277
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQM---EIVGGIRHENVVALRAYY 364
LG G FG YKA ++ S + ++ + + E E M +I+ H N+V L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 365 YSKDEKLMVYDYFEPGSVSA-MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
Y ++ ++ ++ G+V A ML R +S + + K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQI--------QVVCKQTLDALNYLHDNK 155
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXX--------XXXXXXXXEVTDTR 475
++H +KA NI G + ++D E + R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 476 KATQASDVFSFGVLLLELLTGKSPIH 501
+DV+S G+ L+E+ + P H
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQM---EIVGGIRHENVVALRAYY 364
LG G FG YKA ++ S + ++ + + E E M +I+ H N+V L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 365 YSKDEKLMVYDYFEPGSVSA-MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGK 423
Y ++ ++ ++ G+V A ML R +S + + K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQI--------QVVCKQTLDALNYLHDNK 155
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXX--------XXXXXXXXEVTDTR 475
++H +KA NI G + ++D E + R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 476 KATQASDVFSFGVLLLELLTGKSPIH 501
+DV+S G+ L+E+ + P H
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K ++E + + +F ++ E++ + H +V L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V+++ E G +S L +RG ++ L V ++
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---------ASVI 125
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 230
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + I
Sbjct: 231 THV--YQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 25/209 (11%)
Query: 306 EVLGKGTFGTAYKAAL----EDASTVVVKRLKEVNVGKREFE---QQMEIVGGIRHENVV 358
+VLG G FGT +K E V ++ E G++ F+ M +G + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGE--GQSSLDWDTRVXXXXXXXXXXXXX 416
L +L V Y GS+ + RG Q L+W ++
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL------ 149
Query: 417 XTENGGKLVHGGIKASNIFLNSQGHV-----CVSDIXXXXXXXXXXXXXXXXXXXXXXEV 471
E+G +VH + A N+ L S V V+D+ E
Sbjct: 150 -EEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSP 499
K T SDV+S+GV + EL+T G P
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASISK 162
G P +LENL L L NSFSG +P + +L +DL+ N FN +IPA++ K
Sbjct: 501 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 64 ADHSRVVALRLPGMALRGEIPPNTIGXXXXXXXXXXXXXXXXGLFPSDFSKLENLTSLHL 123
++ S +V+L L L G IP +++G G P + ++ L +L L
Sbjct: 412 SNCSELVSLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 470
Query: 124 QFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASISK 162
FN +G +P S NL I LSNN IP I +
Sbjct: 471 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
G PS S NL + L N +G +P NL ++ LSNN F+ +IPA +
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIP 157
G P + L L L L N G +P S LT IDLSNN + IP
Sbjct: 667 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 118 LTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
L L+LQ N F+G +P S + L + LS N+ + +IP+S+
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASIS 161
G P + + L L+L N SG +P + L ++DLS+N + IP ++S
Sbjct: 643 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 22/55 (40%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
G P S L SLHL FN SG +P + L + L N IP +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 81 GEIPPNTIGXXXXXXXXXXXXXXXXGLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSV-W 139
GEIP G G P F L SL L N+FSG LP+D +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 140 NNLTVIDLSNNFFNASIPASISK 162
L V+DLS N F+ +P S++
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTN 362
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 29/273 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
E LG G G + + V VK LK+ ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 366 SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+++ ++ +Y E GS+ L G L + + N +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H ++A+NI ++ ++D E + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFG+LL E++T G+ P EV+ + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ +++++ C PE+RP + ++ED
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 25/209 (11%)
Query: 306 EVLGKGTFGTAYKAAL----EDASTVVVKRLKEVNVGKREFE---QQMEIVGGIRHENVV 358
+VLG G FGT +K E V ++ E G++ F+ M +G + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGE--GQSSLDWDTRVXXXXXXXXXXXXX 416
L +L V Y GS+ + RG Q L+W ++
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL------ 131
Query: 417 XTENGGKLVHGGIKASNIFLNSQGHV-----CVSDIXXXXXXXXXXXXXXXXXXXXXXEV 471
E+G +VH + A N+ L S V V+D+ E
Sbjct: 132 -EEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSP 499
K T SDV+S+GV + EL+T G P
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASISK 162
G P +LENL L L NSFSG +P + +L +DL+ N FN +IPA++ K
Sbjct: 504 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 64 ADHSRVVALRLPGMALRGEIPPNTIGXXXXXXXXXXXXXXXXGLFPSDFSKLENLTSLHL 123
++ S +V+L L L G IP +++G G P + ++ L +L L
Sbjct: 415 SNCSELVSLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473
Query: 124 QFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASISK 162
FN +G +P S NL I LSNN IP I +
Sbjct: 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
G PS S NL + L N +G +P NL ++ LSNN F+ +IPA +
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIP 157
G P + L L L L N G +P S LT IDLSNN + IP
Sbjct: 670 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 118 LTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
L L+LQ N F+G +P S + L + LS N+ + +IP+S+
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASIS 161
G P + + L L+L N SG +P + L ++DLS+N + IP ++S
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 22/55 (40%)
Query: 106 GLFPSDFSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASIPASI 160
G P S L SLHL FN SG +P + L + L N IP +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/274 (17%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 124
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDE-------VVHLVRWVNSVVREEWTAEVFDVELL 533
SD++S G+ L+E+ G+ PI E + L+ ++ + + + VF +E
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVL 567
+ N C+++ P ER + ++
Sbjct: 244 DFVN-------------KCLIKNPAERADLKQLM 264
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 23/210 (10%)
Query: 306 EVLGK-GTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQM---EIVGGIRHENVVALR 361
E++G+ G FG YKA ++ S + ++ + + E E M +I+ H N+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 362 AYYYSKDEKLMVYDYFEPGSVSA-MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+Y ++ ++ ++ G+V A ML R +S + +
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI--------QVVCKQTLDALNYLH 125
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXX---------XXXXXXXXEV 471
K++H +KA NI G + ++D E
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSPIH 501
+ R +DV+S G+ L+E+ + P H
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 89/217 (41%), Gaps = 18/217 (8%)
Query: 306 EVLGKGTFGTAY---KAALEDASTV-VVKRLKEVNVGKRE---FEQQMEIVGGIRHENVV 358
+VLG+G+FG + K D+ + +K LK+ + R+ + + +I+ + H VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L + ++ + ++ D+ G + L + + + V
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTR 475
G +++ +K NI L+ +GH+ ++D EV + +
Sbjct: 148 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLV 512
+ ++D +S+GVL+ E+LTG P E + L+
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y + + +V + E S+ LH ++ + + ++
Sbjct: 87 GYS-TAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ + SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSKVR- 251
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E++ R
Sbjct: 252 ---SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 25/204 (12%)
Query: 308 LGKGTFGTAYKAALE-----DASTVVVKRLKEVNVGK-REFEQQMEIVGGIRHENVVALR 361
LGKG FG+ + + V VK+L+ + R+F+++++I+ + + +V R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 362 AYYYS--KDEKLMVYDYFEPGSVSAMLHGRRGEGQSS--LDWDTRVXXXXXXXXXXXXXX 417
Y + E +V +Y G + L R +S L + +++
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL------- 127
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ VH + A NI + S+ HV ++D E
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 472 TDTRKATQASDVFSFGVLLLELLT 495
++ SDV+SFGV+L EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 33/273 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
+G G FG + + V +K ++E + + +F ++ E++ + H +V L +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRG--EGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLV 425
+V ++ E G +S L +RG ++ L V ++
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---------VI 126
Query: 426 HGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQAS 481
H + A N + + VSD EV + + S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 482 DVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
DV+SFGVL+ E+ + GK P EVV +++ R L P +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFR------------LYKPRLAS 231
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
V Q+ C PE+RP + +L+ + +I
Sbjct: 232 THV--YQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 10/196 (5%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+ +GKG FG + V VK +K + + F + ++ +RH N+V L
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 366 SKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ L +V +Y GS+ L R G+S L D + G
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYL---EGNNF 123
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVF 484
VH + A N+ ++ VSD E +K + SDV+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 485 SFGVLLLELLT-GKSP 499
SFG+LL E+ + G+ P
Sbjct: 184 SFGILLWEIYSFGRVP 199
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 23/207 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQ---QMEIVGGIRHENVVALRAYY 364
LG G FG YKA ++ + ++ E + E E ++EI+ H +V L Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 365 YSKDEKLMVYDYFEPGSV--SAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
Y D KL + F PG + ML RG + + R +
Sbjct: 78 YH-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL--------HSK 128
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX-----XXXXXEVTDTRKA 477
+++H +KA N+ + +G + ++D + +T K
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 478 T---QASDVFSFGVLLLELLTGKSPIH 501
T +D++S G+ L+E+ + P H
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 23/207 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQ---QMEIVGGIRHENVVALRAYY 364
LG G FG YKA ++ + ++ E + E E ++EI+ H +V L Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 365 YSKDEKLMVYDYFEPGSV--SAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
Y D KL + F PG + ML RG + + R +
Sbjct: 86 YH-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL--------HSK 136
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVT--DTRKA 477
+++H +KA N+ + +G + ++D EV +T K
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 478 T---QASDVFSFGVLLLELLTGKSPIH 501
T +D++S G+ L+E+ + P H
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 10/196 (5%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+ +GKG FG + V VK +K + + F + ++ +RH N+V L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 366 SKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ L +V +Y GS+ L R G+S L D + G
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYL---EGNNF 310
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVF 484
VH + A N+ ++ VSD E +K + SDV+
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 485 SFGVLLLELLT-GKSP 499
SFG+LL E+ + G+ P
Sbjct: 371 SFGILLWEIYSFGRVP 386
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 37/255 (14%)
Query: 306 EVLGKGTFGTAYKAAL------EDASTVVVKRLKEVNVG--KREFEQQMEIVGGIRHENV 357
E LG+ FG YK L E V +K LK+ G + EF + + ++H NV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 358 VALRAYYYSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQ-SSLDWDTRVXXXXXXXXXXXX 415
V L +KD+ L M++ Y G + L R S D D V
Sbjct: 92 VCLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 416 XXTENGG-------KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
G +VH + N+ + + +V +SD+
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVR--------- 513
E K + SD++S+GV+L E+ + G P +VV ++R
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD 270
Query: 514 ----WVNSVVREEWT 524
WV +++ E W
Sbjct: 271 DCPAWVYALMIECWN 285
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 10/196 (5%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+ +GKG FG + V VK +K + + F + ++ +RH N+V L
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 366 SKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ L +V +Y GS+ L R G+S L D + G
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYL---EGNNF 138
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVF 484
VH + A N+ ++ VSD E +K + SDV+
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 485 SFGVLLLELLT-GKSP 499
SFG+LL E+ + G+ P
Sbjct: 199 SFGILLWEIYSFGRVP 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLK---EVNVGKREFEQQMEIVGGIRHENVVALRA 362
E +G+GT+G YKA V +KR++ E +++ ++ + H N+V+L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
+S+ +V+++ E + E ++ L D+++ ++
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVL-----DENKTGLQ-DSQIKIYLYQLLRGVAHCHQH-- 138
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRKAT 478
+++H +K N+ +NS G + ++D D ++K +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 479 QASDVFSFGVLLLELLTGK 497
+ D++S G + E++TGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLK---EVNVGKREFEQQMEIVGGIRHENVVALRA 362
E +G+GT+G YKA V +KR++ E +++ ++ + H N+V+L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
+S+ +V+++ E + E ++ L D+++ ++
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVL-----DENKTGLQ-DSQIKIYLYQLLRGVAHCHQH-- 138
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRKAT 478
+++H +K N+ +NS G + ++D D ++K +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 479 QASDVFSFGVLLLELLTGK 497
+ D++S G + E++TGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 92/254 (36%), Gaps = 37/254 (14%)
Query: 306 EVLGKGTFGTAYKAAL------EDASTVVVKRLKEVNVG--KREFEQQMEIVGGIRHENV 357
E LG+ FG YK L E V +K LK+ G + EF + + ++H NV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 358 VALRAYYYSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQ-SSLDWDTRVXXXXXXXXXXXX 415
V L +KD+ L M++ Y G + L R S D D V
Sbjct: 75 VCLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 416 XXTENGG-------KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
G +VH + N+ + + +V +SD+
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVR--------- 513
E K + SD++S+GV+L E+ + G P +VV ++R
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD 253
Query: 514 ----WVNSVVREEW 523
WV +++ E W
Sbjct: 254 DCPAWVYALMIECW 267
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 102/274 (37%), Gaps = 37/274 (13%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + +++ V VK LK + + F ++ ++ ++H+ +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSL----DWDTRVXXXXXXXXXXXXXXTENGGK 423
+ ++ +Y GS+ L G G+ L D+ ++
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---------N 130
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQ 479
+H ++A+N+ ++ ++D E + T
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 480 ASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNI 538
SDV+SFG+LL E++T GK P +V+ + + R P +
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS-----------------QGYRMPRV 233
Query: 539 EEEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
E E+ + C EERP D L+ V D
Sbjct: 234 ENCPDELYDIMKMCWKEKAEERPTF-DYLQSVLD 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 17/212 (8%)
Query: 306 EVLGKGTFGTAYKAALE-DASTVVVKRLKEVNVGKREFEQQME-----IVGGIRHENVVA 359
+V+GKG+FG A + + VK L++ + K++ E+ + ++ ++H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L + + D+ V DY G + L R L+ R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL- 158
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTRK 476
+V+ +K NI L+SQGH+ ++D EV +
Sbjct: 159 ---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 477 ATQASDVFSFGVLLLELLTGKSPIHATGGDEV 508
+ D + G +L E+L G P ++ E+
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 186
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 245
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 246 SDIWSMGLSLVEMAVGRYPI 265
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L R + ++ + +N +H
Sbjct: 327 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 441 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 486
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 487 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 515
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 124
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 184 SDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 124
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 184 SDIWSMGLSLVEMAVGRYPI 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 110/301 (36%), Gaps = 51/301 (16%)
Query: 305 AEVLGKGTFGTAYKA------ALEDASTVVVKRLKEVNVGK---REFEQQMEIVGGIRHE 355
+ LG+G FG KA +TV VK LKE N R+ + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDW------------DTRV 403
+V+ L L++ +Y + GS+ L R G L D R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 404 XXXXXXXXXXXXXXTENGG----KLVHGGIKASNIFLNSQGHVCVSD------IXXXXXX 453
KLVH + A NI + + +SD +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 454 XXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ D TQ SDV+SFGVLL E++T G +P + + +L+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
Query: 513 RWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + + R + N EEM ++ + C + P++RP AD+ K +E
Sbjct: 266 KTGHRMERPD--------------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
Query: 573 I 573
+
Sbjct: 309 M 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 111/301 (36%), Gaps = 51/301 (16%)
Query: 305 AEVLGKGTFGTAYKA------ALEDASTVVVKRLKEVNVGK---REFEQQMEIVGGIRHE 355
+ LG+G FG KA +TV VK LKE N R+ + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDW------------DTRV 403
+V+ L L++ +Y + GS+ L R G L D R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 404 XXXXXXXXXXXXXXTENGG----KLVHGGIKASNIFLNSQGHVCVSD------IXXXXXX 453
KLVH + A NI + + +SD +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 454 XXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ D TQ SDV+SFGVLL E++T G +P + + +L+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
Query: 513 RWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
+ + + R + N EEM ++ + C + P++RP AD+ K +E
Sbjct: 266 KTGHRMERPD--------------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
Query: 573 I 573
+
Sbjct: 309 M 309
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 308 LGKGTFGTAYKAALE-----DASTVVVKRLKEVNVGK-REFEQQMEIVGGIRHENVVALR 361
LGKG FG+ + + V VK+L+ + R+F+++++I+ + + +V R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAMLHGRRGEGQSS--LDWDTRVXXXXXXXXXXXXXX 417
Y + +V +Y G + L R +S L + +++
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL------- 130
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ VH + A NI + S+ HV ++D E
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 472 TDTRKATQASDVFSFGVLLLELLT 495
++ SDV+SFGV+L EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 100/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S++ V E +H
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAV-----VLLYMATQISSAMEYLEK-KNFIH 341
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 447
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 448 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 308 LGKGTFGTAYKAALE-----DASTVVVKRLKEVNVGK-REFEQQMEIVGGIRHENVVALR 361
LGKG FG+ + + V VK+L+ + R+F+++++I+ + + +V R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAMLHGRRGEGQSS--LDWDTRVXXXXXXXXXXXXXX 417
Y + +V +Y G + L R +S L + +++
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL------- 131
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ VH + A NI + S+ HV ++D E
Sbjct: 132 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 472 TDTRKATQASDVFSFGVLLLELLT 495
++ SDV+SFGV+L EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL--- 131
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 132 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 233
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 124
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 184 SDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 124
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 184 SDIWSMGLSLVEMAVGRYPI 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL--- 127
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 128 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 137
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 146
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL--- 127
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 128 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 141 -----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 239
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 141 -----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 239
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 308 LGKGTFGTAYKAALE-----DASTVVVKRLKEVNVGK-REFEQQMEIVGGIRHENVVALR 361
LGKG FG+ + + V VK+L+ + R+F+++++I+ + + +V R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 362 AYYYSKDEK--LMVYDYFEPGSVSAMLHGRRGEGQSS--LDWDTRVXXXXXXXXXXXXXX 417
Y + +V +Y G + L R +S L + +++
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL------- 143
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ VH + A NI + S+ HV ++D E
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 472 TDTRKATQASDVFSFGVLLLELLT 495
++ SDV+SFGV+L EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 80/208 (38%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 147
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 148
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 166
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 167 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 99/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G FG Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 132
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPEK 238
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 239 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L R + ++ + +N +H
Sbjct: 285 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 399 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 444
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 445 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 141
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 145
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL--- 127
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 128 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 167
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 168 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 39/271 (14%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEVNVGKRE----FEQQMEIVGGIRHENV 357
E LG G+FG + + S +V VK LK + + E F +++ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 358 VALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ L + K MV + GS+ L R+ +G L +R
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL--- 131
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEV 471
+ +H + A N+ L ++ V + D E
Sbjct: 132 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDV 530
TR + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 233
Query: 531 ELLRYPNIEEEMVEMLQVGMACVVRMPEERP 561
E R P E+ ++ V + C PE+RP
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 143
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 144 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 140
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 141 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 148
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 151
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ- 210
Query: 481 SDVFSFGVLLLELLTGKSPI 500
SD++S G+ L+E+ G+ PI
Sbjct: 211 SDIWSMGLSLVEMAVGRYPI 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 147
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 33/267 (12%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G +K + + + V+ ++L + + + + ++++++ +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 365 YSKDEKLMVYDYFEPGSVSAMLH--GRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
YS E + ++ + GS+ +L GR E ++
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPE---------QILGKVSIAVIKGLTYLREKH 127
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H +K SNI +NS+G + + D + + T + Q
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQ- 186
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEE 540
SD++S G+ L+E+ G+ P + L+ ++ + + + VF +E + N
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMA---IFELLDYIVNEPPPKLPSAVFSLEFQDFVN--- 240
Query: 541 EMVEMLQVGMACVVRMPEERPKMADVL 567
C+++ P ER + ++
Sbjct: 241 ----------KCLIKNPAERADLKQLM 257
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 108/285 (37%), Gaps = 37/285 (12%)
Query: 308 LGKGTFGTAYKAA-LEDASTVVVKRL----KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
+G G+FG Y A + ++ V +K++ K+ N ++ +++ + +RH N + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
Y + +V +Y GS S +L + Q V +
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE-------VEIAAVTHGALQGLAYLHSH 173
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEV--TDTRKATQA 480
++H +KA NI L+ G V + D + D +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 481 SDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
DV+S G+ +EL K P+ + + H+ + + ++ +E F
Sbjct: 234 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF----------- 282
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPST 584
V+ +C+ ++P++RP +LK R V E PP+
Sbjct: 283 RNFVD------SCLQKIPQDRPTSEVLLKH----RFVLRERPPTV 317
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 146
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALED-ASTVVVKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + V VK++ +RE ++ I+ H+NVV + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + N G +
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---------TVCLSVLRALSYLHNQG-V 162
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L S G + +SD EV
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 268
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 148
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-------XXXEV 471
K VH + A N L+ + V V+D E
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 86 EPPFYIIIEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 108/285 (37%), Gaps = 37/285 (12%)
Query: 308 LGKGTFGTAYKAA-LEDASTVVVKRL----KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
+G G+FG Y A + ++ V +K++ K+ N ++ +++ + +RH N + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
Y + +V +Y GS S +L + Q V +
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQE-------VEIAAVTHGALQGLAYLHSH 134
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEV--TDTRKATQA 480
++H +KA NI L+ G V + D + D +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 481 SDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
DV+S G+ +EL K P+ + + H+ + + ++ +E F
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF----------- 243
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPPST 584
V+ +C+ ++P++RP +LK R V E PP+
Sbjct: 244 RNFVD------SCLQKIPQDRPTSEVLLKH----RFVLRERPPTV 278
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 99/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 132
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPEK 238
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 239 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 86 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + T
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 146
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 158 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRLKEVNVGKREFE-QQMEIVGGIRHENVVALRAYYY 365
+G+G+ G A + + +V VK++ +RE ++ I+ +HENVV + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 366 SKDEKLMVYDYFEPGSVSAML-HGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
DE +V ++ E G+++ ++ H R E Q + + +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQGV 191
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IK+ +I L G V +SD E+
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G++++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSD-------IXXXXXXXXXXXXXXXXXXXXXXEV 471
K VH + A N L+ + V V+D + E
Sbjct: 154 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 85 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 244
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 245 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 81 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 15 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 73 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 124
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSKVR- 237
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E + R
Sbjct: 238 ---SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLAR 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 86 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 153 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 308 LGKGTFGTAYKAALEDASTVV-VKRL----KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG +G +K+ VV VK++ + +R F + M + HEN+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 363 YYYSKDEK--LMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+ +++ +V+DY E + A++ E V +
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVIRANILEP---------VHKQYVVYQLIKVIKYLH 126
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSD 446
G L+H +K SNI LN++ HV V+D
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVAD 152
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 212 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAS----TVVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 153 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 76 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFE-------MIKLIDIARQTAQGMDYLHA 127
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSKVR- 240
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E + R
Sbjct: 241 ---SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLAR 277
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 139
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 82 EPPFYIIIEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 241
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 306 EVLGKGTFGTAYKAALEDAST----VVVKRLKEV-NVGK-REFEQQMEIVGGIRHENVVA 359
EV+G+G FG Y L D VK L + ++G+ +F + I+ H NV++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 360 LRAYYY-SKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXT 418
L S+ L+V Y + G + + R E + D
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX-------XXEV 471
K VH + A N L+ + V V+D E
Sbjct: 154 ----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 472 TDTRKATQASDVFSFGVLLLELLTGKSP 499
T+K T SDV+SFGVLL EL+T +P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 71 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 122
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 81 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 86 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 33 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 91 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 142
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 76 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFE-------MIKLIDIARQTAQGMDYLHA 127
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSKVR- 240
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E + R
Sbjct: 241 ---SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLAR 277
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 132
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPEK 238
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 239 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 98/272 (36%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L + S+ V +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSA------VVLLYMATQISSAMEYLEKKNFIH 134
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 71 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 122
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 112/303 (36%), Gaps = 55/303 (18%)
Query: 305 AEVLGKGTFGTAYKA------ALEDASTVVVKRLKEVNVGK---REFEQQMEIVGGIRHE 355
+ LG+G FG KA +TV VK LKE N R+ + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDW------------DTRV 403
+V+ L L++ +Y + GS+ L R G L D R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 404 XXXXXXXXXXXXXXTENGGK------LVHGGIKASNIFLNSQGHVCVSD------IXXXX 451
G + LVH + A NI + + +SD +
Sbjct: 147 LTMGDLISFAWQ--ISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 452 XXXXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVH 510
+ D TQ SDV+SFGVLL E++T G +P + + +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 511 LVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMV 570
L++ + + R + N EEM ++ + C + P++RP AD+ K +
Sbjct: 264 LLKTGHRMERPD--------------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 571 EDI 573
E +
Sbjct: 307 EKM 309
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 82/222 (36%), Gaps = 25/222 (11%)
Query: 306 EVLGKGTFGTAYKAA-LEDASTV----VVKRLKEVNVGK--REFEQQMEIVGGIRHENVV 358
+VLG G FGT YK + D V +K L+E K +E + ++ G+ V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 359 ALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGE--GQSSLDWDTRVXXXXXXXXXXXXX 416
L + +L V G + + RG Q L+W ++
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV--- 138
Query: 417 XTENGGKLVHGGIKASNIFLNSQGHVCVSD-----IXXXXXXXXXXXXXXXXXXXXXXEV 471
+LVH + A N+ + S HV ++D + E
Sbjct: 139 ------RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 472 TDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
R+ T SDV+S+GV + EL+T G P E+ L+
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 109/295 (36%), Gaps = 38/295 (12%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
L LMV ++ + G++S L +R E D
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 418 TENG------GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----- 466
G K +H + A NI L+ + V + D
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 467 XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTA 525
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCR 262
Query: 526 EVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 263 RLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 40 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 98 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 149
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 82 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 241
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 83 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G++ L R + ++ + +N +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 73/196 (37%), Gaps = 10/196 (5%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYY 365
+ +GKG FG + V VK +K + + F + ++ +RH N+V L
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 366 SKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
+ L +V +Y GS+ L R G+S L D + G
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYL---EGNNF 129
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVF 484
VH + A N+ ++ VSD E + SDV+
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 485 SFGVLLLELLT-GKSP 499
SFG+LL E+ + G+ P
Sbjct: 190 SFGILLWEIYSFGRVP 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 109/296 (36%), Gaps = 39/296 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE-------GQSSLDWDTRVXXXXXXX 410
L LMV ++ + G++S L +R E D+ T
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 411 XXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---- 466
K +H + A NI L+ + V + D
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 467 -XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWT 524
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFC 261
Query: 525 AEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 262 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 83 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 108/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 260
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 109/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 260
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 107/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 260
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 29/272 (10%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
LG G +G Y+ + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 367 KDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVH 426
+ ++ ++ G+ +L R + ++ + +N +H
Sbjct: 94 EPPFYIITEFMTYGN---LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 427 GGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQASD 482
+ A N + V V+D E K + SD
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 483 VFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEE 541
V++FGVLL E+ T G SP +V L+ D + R E+
Sbjct: 208 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 253
Query: 542 MVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
+ E+++ AC P +RP A++ + E +
Sbjct: 254 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 99 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 150
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 107/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 262
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 263 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +K + +V + E S+ LH + + + +
Sbjct: 99 GYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 150
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX--------EVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLV 512
+ SDV++FG++L EL+TG+ P + D+++ +V
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 107/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 251
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 252 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 110/292 (37%), Gaps = 33/292 (11%)
Query: 292 NLVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGG 351
NL D E+L E +GKG+FG +K VV ++ ++ + E E + +
Sbjct: 15 NLKADPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 73
Query: 352 IRHENVVALRAYY--YSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXX 408
+ + + YY Y KD KL ++ +Y GS +L LD +T++
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLD-ETQIATILR 126
Query: 409 XXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H IKA+N+ L+ G V ++D
Sbjct: 127 EILKGLDYL--HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 467 -XXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTA 525
EV +D++S G+ +EL G+ P +V+ L+ N E
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG--- 241
Query: 526 EVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
Y +E VE AC+ + P RP ++LK +R K
Sbjct: 242 --------NYSKPLKEFVE------ACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 50/284 (17%)
Query: 306 EVLGKGTFGTAYKAALE-DASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
E++G G FG +KA D T V+KR+K N + E++++ + + H N+V +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCW 73
Query: 365 ---------------YSKDEKLMV-YDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXX 408
SK + L + ++ + G++ + RRGE LD +V
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLD---KVLALEL 127
Query: 409 XXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXX 466
+ KL++ +K SNIFL V + D +
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 467 XXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAE 526
E ++ + D+++ G++L ELL H D ++ +R+ ++
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL------HVC--DTAFETSKFFTD-LRDGIISD 238
Query: 527 VFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMV 570
+FD + E+ +++ L + + PE+RP +++L+ +
Sbjct: 239 IFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTL 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 109/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 251
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 252 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 106/291 (36%), Gaps = 36/291 (12%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE----GQSSLDWDTRVXXXXXXXXXX 413
L LMV ++ + G++S L +R E D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 414 XXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XX 468
K +H + A NI L+ + V + D
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 469 XEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEV 527
E R T SDV+SFGVLL E+ + G SP D EE+ +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRL 260
Query: 528 FDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
+ +R P+ EM Q + C P +RP +++++ + ++ + A
Sbjct: 261 KEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 106/297 (35%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 359 ALRAYYYSKDEKLMVYDYF-EPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV F + G++S L +R E L D
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 251
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 252 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 109/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 251
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 252 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 107/297 (36%), Gaps = 40/297 (13%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE------GQSSLDWDTRVXXXXXXXX 411
L LMV ++ + G++S L +R E L D
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 412 XXXXXXTE--NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
E K +H + A NI L+ + V + D
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 467 --XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEW 523
E R T SDV+SFGVLL E+ + G SP D EE+
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 297
Query: 524 TAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ + +R P+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 298 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 37/274 (13%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYSK 367
LG G FG + +++ V VK LK + + F ++ ++ ++H+ +V L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 368 DEKLMVYDYFEPGSVSAMLHGRRGEGQSSL----DWDTRVXXXXXXXXXXXXXXTENGGK 423
+ ++ ++ GS+ L G G+ L D+ ++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---------N 129
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX----XXXEVTDTRKATQ 479
+H ++A+N+ ++ ++D E + T
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 480 ASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNI 538
S+V+SFG+LL E++T GK P +V+ + + R P +
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALS-----------------QGYRMPRM 232
Query: 539 EEEMVEMLQVGMACVVRMPEERPKMADVLKMVED 572
E E+ + C EERP D L+ V D
Sbjct: 233 ENCPDELYDIMKMCWKEKAEERPTF-DYLQSVLD 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXX---XXXXXXXXXXXXXXXEVTDTRKATQA 480
+++ +K N+ L+S+GH+ ++D E+ + ++
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVV-----HLVRWVNSVVRE 521
D ++FGVLL E+L G++P DE+ H V + S+ +E
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 107/291 (36%), Gaps = 36/291 (12%)
Query: 308 LGKGTFGTAYKA------ALEDASTVVVKRLKE--VNVGKREFEQQMEIVGGIRHE-NVV 358
LG+G FG +A TV VK LKE + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 359 ALRAYYYSKDEKLMVY-DYFEPGSVSAMLHGRRGE----GQSSLDWDTRVXXXXXXXXXX 413
L LMV ++ + G++S L +R E D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 414 XXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XX 468
K +H + A NI L+ + V + D
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 469 XEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEV 527
E R T SDV+SFGVLL E+ + G SP D EE+ +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFXRRL 260
Query: 528 FDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
+ +R P+ EM Q + C P +RP +++++ + ++ + A
Sbjct: 261 KEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 110/295 (37%), Gaps = 47/295 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEG-QSSLDWDTRVXXXXXXXXXXXX 415
++ L ++ +Y G++ L RR G + S D + RV
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVS 207
Query: 416 XXTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX- 466
+ K +H + A N+ + + ++D
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 467 ----XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVRE 521
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
Query: 522 EWTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 328 A--------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 362
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXX---XXXXXXXXXXXXXXXEVTDTRKATQA 480
+++ +K N+ L+S+GH+ ++D E+ + ++
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVV-----HLVRWVNSVVRE 521
D ++FGVLL E+L G++P DE+ H V + S+ +E
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE 568
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
E +G+GT+G YKA T +K++ KE +++ I+ ++H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++K ++V+++ + + +L G +S V +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES-------VTAKSFLLQLLNGIAYCHDR 119
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRKAT 478
+++H +K N+ +N +G + ++D D ++K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 479 QASDVFSFGVLLLELLTGKSPIH--ATGGDEVVHLVRWVNSVVREEW 523
D++S G + E++ G +P+ + D+++ + R + + + W
Sbjct: 180 TTIDIWSVGCIFAEMVNG-APLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
E +G+GT+G YKA T +K++ KE +++ I+ ++H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++K ++V+++ + + +L G +S V +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES-------VTAKSFLLQLLNGIAYCHDR 119
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRKAT 478
+++H +K N+ +N +G + ++D D ++K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 479 QASDVFSFGVLLLELLTGKSPIH--ATGGDEVVHLVRWVNSVVREEW 523
D++S G + E++ G +P+ + D+++ + R + + + W
Sbjct: 180 TTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHENVVALRA 362
E +G+GT+G YKA T +K++ KE +++ I+ ++H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++K ++V+++ + + +L G +S V +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES-------VTAKSFLLQLLNGIAYCHDR 119
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTD----TRKAT 478
+++H +K N+ +N +G + ++D D ++K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 479 QASDVFSFGVLLLELLTGKSPIH--ATGGDEVVHLVRWVNSVVREEW 523
D++S G + E++ G +P+ + D+++ + R + + + W
Sbjct: 180 TTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 210 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 269
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 270 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 303
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 108/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 283 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 481 SDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIE 539
SDV+S+GVLL E+ + G SP DE ++ + + + +R P E
Sbjct: 282 SDVWSYGVLLWEIFSLGGSPYPGVQMDE--------------DFCSRLREGMRMRAP--E 325
Query: 540 EEMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
E+ Q+ + C R P+ERP+ A++++ + D+
Sbjct: 326 YSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 29/260 (11%)
Query: 297 LEDLLRASAE-----VLGKGTFGTAYKAAL--EDAS--TVVVKRLKEVNVGKREFEQQME 347
LED+L + +LGKG FG+ +A L ED S V VK LK + + E+ +
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 348 IVGGIR---HENVVALRAYYYSKDEK------LMVYDYFEPGSVSA-MLHGRRGEGQSSL 397
++ H +V L K +++ + + G + A +L R GE +L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 398 DWDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXX 457
T V + N +H + A N L VCV+D
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 458 XXXXXXXXX-----XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHL 511
E T SDV++FGV + E++T G++P E+ +
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251
Query: 512 VRWVNSVVR-EEWTAEVFDV 530
+ N + + E EV+D+
Sbjct: 252 LIGGNRLKQPPECMEEVYDL 271
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 114/297 (38%), Gaps = 63/297 (21%)
Query: 306 EVLGKGTFGTAYKAALE-DASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYY 364
E++G G FG +KA D T V++R+K N + E++++ + + H N+V +
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN---EKAEREVKALAKLDHVNIVHYNGCW 74
Query: 365 -------YSKDEKLMVYDY----------------------FEPGSVSAMLHGRRGEGQS 395
+ D+ L DY + G++ + RRGE
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--- 131
Query: 396 SLDWDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSD--IXXXXXX 453
LD +V + KL+H +K SNIFL V + D +
Sbjct: 132 KLD---KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 454 XXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVR 513
E ++ + D+++ G++L ELL H D +
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVC--DTAFETSK 240
Query: 514 WVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMV 570
+ +R+ +++FD + E+ +++ L + + PE+RP +++L+ +
Sbjct: 241 FFTD-LRDGIISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTL 283
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 212 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 270
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 271 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 305
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 17/232 (7%)
Query: 307 VLGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALR 361
VLGKG FG + A + K+ + G+ + +I+ + VV+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +KD +V G + ++ GQ+ V E
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHRE-- 305
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXX--XXXXXXXXXXXXXXXXXEVTDTRKATQ 479
++V+ +K NI L+ GH+ +SD+ EV + T
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF 364
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGG----DEVVHLVRWVNSVVREEWTAEV 527
+ D ++ G LL E++ G+SP +EV LV+ V E ++ +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 274
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 275 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 308
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 17/232 (7%)
Query: 307 VLGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALR 361
VLGKG FG + A + K+ + G+ + +I+ + VV+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y +KD +V G + ++ GQ+ V E
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHRE-- 305
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXX--XXXXXXXXXXXXXXXXXEVTDTRKATQ 479
++V+ +K NI L+ GH+ +SD+ EV + T
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF 364
Query: 480 ASDVFSFGVLLLELLTGKSPIHATGG----DEVVHLVRWVNSVVREEWTAEV 527
+ D ++ G LL E++ G+SP +EV LV+ V E ++ +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 108/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 283 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 107/283 (37%), Gaps = 35/283 (12%)
Query: 305 AEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE---FEQQMEIVGGIRHENVVALR 361
+ +G G+FGT YK V VK L ++ F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 362 AYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENG 421
Y + + +V + E S+ LH + + + +
Sbjct: 71 GYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEM-------IKLIDIARQTAQGMDYLHA 122
Query: 422 GKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--------XXXEVTD 473
++H +K++NIFL+ V + D + D
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 474 TRKATQASDVFSFGVLLLELLTGKSPI-HATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
+ SDV++FG++L EL+TG+ P + D+++ +V R + ++ V
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSKVR- 235
Query: 533 LRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRR 575
N + M ++ C+ + +ERP +L +E + R
Sbjct: 236 ---SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLAR 272
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 292 NLVF---DLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEI 348
NL F D E+L E +GKG+FG +K VV ++ ++ + E E +
Sbjct: 17 NLYFQSMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE 75
Query: 349 VGGIRHENVVALRAYY--YSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXX 405
+ + + + YY Y KD KL ++ +Y GS +L LD +T++
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLD-ETQIAT 128
Query: 406 XXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXX 465
+ K +H IKA+N+ L+ G V ++D
Sbjct: 129 ILREILKGLDYL--HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 466 X---XXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREE 522
EV +D++S G+ +EL G+ P +V+ L+ N E
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 246
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
Y +E VE AC+ + P RP ++LK +R K
Sbjct: 247 -----------NYSKPLKEFVE------ACLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 33/291 (11%)
Query: 293 LVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGI 352
+ D E+L E +GKG+FG +K VV ++ ++ + E E + + +
Sbjct: 1 MSLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 353 RHENVVALRAYY--YSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXX 409
+ + YY Y KD KL ++ +Y GS +L LD +T++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLD-ETQIATILRE 112
Query: 410 XXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
+ K +H IKA+N+ L+ G V ++D
Sbjct: 113 ILKGLDYL--HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 467 XXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAE 526
EV +D++S G+ +EL G+ P +V+ L+ N E
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---- 226
Query: 527 VFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
Y +E VE AC+ + P RP ++LK +R K
Sbjct: 227 -------NYSKPLKEFVE------ACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 13/198 (6%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVG---KREFEQQMEIVGGIRHENVVALRAYY 364
LG G G K + ++ ++L + + + + ++++++ +V +
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 365 YSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKL 424
YS E + ++ + GS+ +L + + + ++
Sbjct: 84 YSDGEISICMEHMDGGSLDQVL-------KEAKRIPEEILGKVSIAVLRGLAYLREKHQI 136
Query: 425 VHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASD 482
+H +K SNI +NS+G + + D + + T + Q SD
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQ-SD 195
Query: 483 VFSFGVLLLELLTGKSPI 500
++S G+ L+EL G+ PI
Sbjct: 196 IWSMGLSLVELAVGRYPI 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 33/291 (11%)
Query: 293 LVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGI 352
+ D E+L E +GKG+FG +K VV ++ ++ + E E + + +
Sbjct: 1 MSLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 353 RHENVVALRAYY--YSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXX 409
+ + YY Y KD KL ++ +Y GS +L LD +T++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLD-ETQIATILRE 112
Query: 410 XXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX--- 466
+ K +H IKA+N+ L+ G V ++D
Sbjct: 113 ILKGLDYL--HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 467 XXXEVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAE 526
EV +D++S G+ +EL G+ P +V+ L+ N E
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---- 226
Query: 527 VFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVK 577
Y +E VE AC+ + P RP ++LK +R K
Sbjct: 227 -------NYSKPLKEFVE------ACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 105/294 (35%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 283 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTRKATQA 480
+++ +K N+ L+S+GH+ ++D E+ + ++
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 481 SDVFSFGVLLLELLTGKSPIHATGGDEVV-----HLVRWVNSVVRE 521
D +++GVLL E+L G+ P DE+ H V + S+ +E
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKE 246
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 476 KATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLR 534
+ T SDV+++GV+L E+ + G P + +EV++ VR D +L
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR---------------DGNILA 296
Query: 535 YPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDI 573
P E +E+ + C ++P +RP + ++++ +
Sbjct: 297 CP--ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 85/229 (37%), Gaps = 18/229 (7%)
Query: 307 VLGKGTFGTAYKAALEDASTVVVKRL--KEVNVGKREFEQQM---EIVGGIR-HENVVAL 360
VLGKG+FG A +++ + ++ K+V + + E M I+ R H + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
+ + D V ++ G + M H Q S +D +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDL--MFHI-----QKSRRFDEARARFYAAEIISALMFLHD 142
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXX---XXXXXXXEVTDTRKA 477
G +++ +K N+ L+ +GH ++D E+
Sbjct: 143 KG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 478 TQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAE 526
A D ++ GVLL E+L G +P A D++ + + VV W E
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI-LNDEVVYPTWLHE 249
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 105/294 (35%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ K + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 283 --------------NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 21/203 (10%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE-------FEQQMEIVGGIRHENVVAL 360
LG G T Y A ED + +K + + RE FE+++ + H+N+V++
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
D +V +Y E ++S + E L DT + +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHA---H 128
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXX----EVTDTRK 476
++VH IK NI ++S + + D E
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 477 ATQASDVFSFGVLLLELLTGKSP 499
+ +D++S G++L E+L G+ P
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 106/294 (36%), Gaps = 45/294 (15%)
Query: 308 LGKGTFGTAYKAAL--------EDASTVVVKRLKEVNVGK--REFEQQMEIVGGI-RHEN 356
LG+G FG A ++A TV VK LK+ + + +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
++ L ++ +Y G++ L RR G RV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 XTE--------NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+ K +H + A N+ + + ++D
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 467 ---XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREE 522
E R T SDV+SFGVL+ E+ T G SP +E+ L++ + + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 523 WTAEVFDVELLRYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRV 576
N E+ M++ C +P +RP ++VED+ R+
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRI 316
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
Query: 306 EVLGKGTFGTAYKAALEDA--------STVVVKRLKEVNVGKRE-FEQQMEIVGGIRHEN 356
E LG+GTF +K + + V++K L + + E F + ++ + H++
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXX 416
+V + DE ++V ++ + GS+ L ++ + ++ W V
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEE 131
Query: 417 XTENGGKLVHGGIKASNIFL 436
T L+HG + A NI L
Sbjct: 132 NT-----LIHGNVCAKNILL 146
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 16/182 (8%)
Query: 327 VVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSA 384
V +K LK +R+F + I+G H N++ L ++V +Y E GS+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 385 MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCV 444
L R +GQ ++ ++ ++ G VH + A N+ ++S V
Sbjct: 140 FL--RTHDGQFTI---MQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKV 192
Query: 445 SD------IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLT-GK 497
SD + E R + ASDV+SFGV++ E+L G+
Sbjct: 193 SDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 498 SP 499
P
Sbjct: 253 RP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 16/182 (8%)
Query: 327 VVVKRLKE--VNVGKREFEQQMEIVGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSA 384
V +K LK +R+F + I+G H N++ L ++V +Y E GS+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 385 MLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCV 444
L R +GQ ++ ++ ++ G VH + A N+ ++S V
Sbjct: 140 FL--RTHDGQFTI---MQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKV 192
Query: 445 SD------IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLT-GK 497
SD + E R + ASDV+SFGV++ E+L G+
Sbjct: 193 SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 498 SP 499
P
Sbjct: 253 RP 254
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 309 GKGTFGTAY--KAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRAYYYS 366
G+GTFGT K S + K +++ RE Q M+ + + H N+V L++Y+Y+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYT 90
Query: 367 KDEK 370
E+
Sbjct: 91 LGER 94
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQ---------QMEIVGGIRHEN 356
+ LG+G F T YKA D +T + +K++ +G R + +++++ + H N
Sbjct: 16 DFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 357 VVALRAYYYSKDEKLMVYDYFE 378
++ L + K +V+D+ E
Sbjct: 74 IIGLLDAFGHKSNISLVFDFME 95
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSD--IXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQA 480
K++H IK SNI L+ G++ + D I E D + Q
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 481 ----SDVFSFGVLLLELLTGKSP 499
SDV+S G+ L EL TG+ P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 308 LGKGTFGTAYKAALEDAS-TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVAL 360
LG G +G Y + S TV VK LKE + EF ++ ++ I+H N+V L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 93
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 140
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 158
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 136
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 136
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 160
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 241
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 316
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 317 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 352
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 81/215 (37%), Gaps = 18/215 (8%)
Query: 294 VFDLEDLLRASAEVLGKGTFGTAYKAALE-DASTVVVKRLKEVNVG--KREFEQQMEIVG 350
V + EDL+ E +G+G FG + L D + V VK +E K +F Q+ I+
Sbjct: 110 VLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 351 GIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXX 410
H N+V L K +V + + G L R EG + L T +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEG-ARLRVKTLLQMVGDAA 223
Query: 411 XXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---- 466
++ +H + A N + + + +SD
Sbjct: 224 AGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 467 -XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSP 499
E + + + SDV+SFG+LL E + G SP
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 18/215 (8%)
Query: 294 VFDLEDLLRASAEVLGKGTFGTAYKAALE-DASTVVVKRLKEVNVG--KREFEQQMEIVG 350
V + EDL+ E +G+G FG + L D + V VK +E K +F Q+ I+
Sbjct: 110 VLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 351 GIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXX 410
H N+V L K +V + + G L R EG + L T +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEG-ARLRVKTLLQMVGDAA 223
Query: 411 XXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---- 466
++ +H + A N + + + +SD
Sbjct: 224 AGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 467 -XXXEVTDTRKATQASDVFSFGVLLLELLT-GKSP 499
E + + + SDV+SFG+LL E + G SP
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 207
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 208 WALGVLIYEMAAGYPPFFA 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 76/216 (35%), Gaps = 21/216 (9%)
Query: 298 EDLLRASAEVLGKGTFGTAYKAALEDAST----VVVKRLKEVNVGKR--EFEQQMEIVGG 351
E ++ S V+GKG FG Y D + +K L + ++ F ++ ++ G
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 352 IRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXX 411
+ H NV+AL + V + M HG + S + V
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVL-------LPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 412 XXXXXXTENG-GKLVHGGIKASNIFLNSQGHVCVSD-------IXXXXXXXXXXXXXXXX 463
K VH + A N L+ V V+D +
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 464 XXXXXXEVTDTRKATQASDVFSFGVLLLELLTGKSP 499
E T + T SDV+SFGVLL ELLT +P
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 16/204 (7%)
Query: 308 LGKGTFGTAYKAALED-----ASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
LGKG F ++ + D A +V K L + + ++ I + H++VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
++ D +V + S+ + R+ + + R +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL--------HRN 134
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXX---XXXXXXXXXXXXXXEVTDTRKATQ 479
+++H +K N+FLN V + D EV + +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 480 ASDVFSFGVLLLELLTGKSPIHAT 503
DV+S G ++ LL GK P +
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXX------XXXXXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 243 WALGVLIYEMAAGYPPFFA 261
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 215 WALGVLIYEMAAGYPPFFA 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 216 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 264
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 265 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 300
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 215 WALGVLIYEMAAGYPPFFA 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 275
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 276 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 311
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 219 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 267
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 268 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 303
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 243 WALGVLIYEMAAGYPPFFA 261
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 209 WALGVLIYEMAAGYPPFFA 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 16/214 (7%)
Query: 292 NLVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGG 351
N + D E+L E +GKG+FG +K VV ++ ++ + E E + +
Sbjct: 16 NNIADPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV 74
Query: 352 IRHENVVALRAYY--YSKDEKL-MVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXX 408
+ + + YY Y K KL ++ +Y GS +L D
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA------GPFDEFQIATMLKE 128
Query: 409 XXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-- 466
+E K +H IKA+N+ L+ QG V ++D
Sbjct: 129 ILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
Query: 467 -XXXEVTDTRKATQASDVFSFGVLLLELLTGKSP 499
EV +D++S G+ +EL G+ P
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVT-DTRKA----- 477
+++ IK NI L+S GHV ++D + D +
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 478 TQASDVFSFGVLLLELLTGKSPIHATG 504
+A D +S GVL+ ELLTG SP G
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 260
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 261 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 296
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 217 WALGVLIYEMAAGYPPFFA 235
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 275
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 276 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 311
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 243 WALGVLIYEMAAGYPPFFA 261
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 220 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 268
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 269 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 304
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 223 WALGVLIYEMAAGYPPFFA 241
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 275
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 276 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 311
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXX------XXEVTDTRKA 477
VH + A N+ L +Q + +SD E + K
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
+ SDV+SFGVL+ E + G+ P G EV ++
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 586
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXX-XXXXXXXXXXXXEVTDTRKATQAS- 481
+V+ +K +NI L+ GHV +SD+ EV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 482 DVFSFGVLLLELLTGKSPI 500
D FS G +L +LL G SP
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXX-XXXXXXXXXXXXEVTDTRKATQAS- 481
+V+ +K +NI L+ GHV +SD+ EV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 482 DVFSFGVLLLELLTGKSPI 500
D FS G +L +LL G SP
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
R T SDV+SFGVLL E+ T G SP +E+ L++ + + +
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----------- 275
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
N E+ M++ C +P +RP ++VED+ R+ A
Sbjct: 276 ---NCTNELYMMMR---DCWHAVPSQRPTFK---QLVEDLDRIVA 311
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXX-XXXXXXXXXXXXEVTDTRKATQAS- 481
+V+ +K +NI L+ GHV +SD+ EV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 482 DVFSFGVLLLELLTGKSPI 500
D FS G +L +LL G SP
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXX-XXXXXXXXXXXXEVTDTRKATQAS- 481
+V+ +K +NI L+ GHV +SD+ EV A +S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 482 DVFSFGVLLLELLTGKSPI 500
D FS G +L +LL G SP
Sbjct: 372 DWFSLGCMLFKLLRGHSPF 390
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 6/147 (4%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVAL----- 360
E++G+G +G YK +L D V VK N E+ + V + H+N+
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 361 RAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTEN 420
R + E L+V +Y+ GS+ L + SS V
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 421 GGKLVHGGIKASNIFLNSQGHVCVSDI 447
+ H + + N+ + + G +SD
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDF 164
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XXXEVTDTRKA 477
K +H + A NI L+ + V + D E R
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
T SDV+SFGVLL E+ + G SP D EE+ + + +R P
Sbjct: 280 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 325
Query: 537 NIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 326 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELL 533
RK T SDV+SFGV+L E+ T GK P + E + + EL
Sbjct: 235 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI--------------TQGRELE 280
Query: 534 RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPP 582
R E+ +++ C R P++R + DV ++ + A+ PP
Sbjct: 281 RPRACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQAL----AQAPP 322
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XXXEVTDTRKA 477
K +H + A NI L+ + V + D E R
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
T SDV+SFGVLL E+ + G SP D EE+ + + +R P
Sbjct: 278 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 323
Query: 537 NIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAEN 580
+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 324 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T SDV+SFGV+L E+ T GK P + E + +
Sbjct: 212 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 475 RKATQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLV 512
RK T SDV+SFGV+L E+ T GK P + E + +
Sbjct: 206 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XXXEVTDTRKA 477
K +H + A NI L+ + V + D E R
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
T SDV+SFGVLL E+ + G SP D EE+ + + +R P
Sbjct: 273 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 318
Query: 537 NIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAE 579
+ EM Q + C P +RP +++++ + ++ + A+
Sbjct: 319 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 305 AEVLGKGTFGTAYKAALEDAS--TVVVKRLKEVNVGKREFEQQMEIVGGIRHENVVALRA 362
AE LG+G FG ++ +E +S T + K +K + ++++ I+ RH N++ L
Sbjct: 10 AEDLGRGEFGIVHRC-VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 363 YYYSKDEKLMVYDY 376
+ S +E +M++++
Sbjct: 69 SFESMEELVMIFEF 82
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D E+ ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ ++ G P A
Sbjct: 222 WALGVLIYQMAAGYPPFFA 240
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 308 LGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFE-----QQMEIVGGIRHENVVALRA 362
LG+GT+ T YK + +V LKE+ + E +++ ++ ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVA--LKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 363 YYYSKDEKLMVYDYFE 378
+++ +V++Y +
Sbjct: 68 IIHTEKSLTLVFEYLD 83
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L+H +K N+ L+ GH+ ++D ++ +Q D
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 484 F--------SFGVLLLELLTGKSPIHA 502
+ S GV L E+L G +P +A
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTPFYA 281
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX-----XXXEVTDTRKA 477
K +H + A NI L+ + V + D E R
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 478 TQASDVFSFGVLLLELLT-GKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYP 536
T SDV+SFGVLL E+ + G SP D EE+ + + +R P
Sbjct: 271 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 316
Query: 537 NIEEEMVEMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKA 578
+ EM Q + C P +RP +++++ + ++ + A
Sbjct: 317 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
NV+ L Y +K + +++ + G + L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 34/191 (17%)
Query: 419 ENGGKLVHGGIKASNIFLNSQGHVCVSD------IXXXXXXXXXXXXXXXXXXXXXXEVT 472
+NG ++H +K +NI +++ V V D I E
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 473 DTRKATQASDVFSFGVLLLELLTGKSPIHATGGDEVVHLVRWVNSVVREEWTAEVFDVEL 532
SDV+S G +L E+LTG+ P D V + VRE+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY------QHVREDPIP------- 238
Query: 533 LRYPNIEEEMV--EMLQVGMACVVRMPEERPKMADVLKMVEDIRRVKAENPP------ST 584
P+ E + ++ V + + + PE R + A +M D+ RV PP +
Sbjct: 239 ---PSARHEGLSADLDAVVLKALAKNPENRYQTA--AEMRADLVRVHNGEPPEAPKVLTD 293
Query: 585 ENRSEISSSAA 595
R+ + SSAA
Sbjct: 294 AERTSLLSSAA 304
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 304 SAEVLGKGTFGTAYK-----AALEDASTVVVKRLKEVN---VGKREFEQQMEIVGGIRHE 355
+ E LG G F K L+ A+ + KR + + V + + E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 356 NVVALRAYYYSKDEKLMV 373
NV+ L Y +K + +++
Sbjct: 75 NVITLHEVYENKTDVILI 92
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 22/230 (9%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE------FEQQMEIVGGIRHENVVA 359
E +G+GT+GT +KA + +V LK V + + +++ ++ ++H+N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 360 LRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTE 419
L +S D+KL + F + G D D +
Sbjct: 66 LHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNG------DLDPEIVKSFLFQLLKGLGFCH 118
Query: 420 NGGKLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDT----R 475
+ ++H +K N+ +N G + ++D D +
Sbjct: 119 SRN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 476 KATQASDVFSFGVLLLELLTGKSPIHATG--GDEVVHLVRWVNSVVREEW 523
+ + D++S G + EL P+ D++ + R + + E+W
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 308 LGKGTFGTAYKAA-LEDASTVVVKRLK----EVNVGKREFEQQMEIVGGIRHENVVALRA 362
LG+GT+G YKA TV +KR++ E V +++ ++ ++H N++ L++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI-REVSLLKELQHRNIIELKS 100
Query: 363 YYYSKDEKLMVYDYFE 378
+ ++++Y E
Sbjct: 101 VIHHNHRLHLIFEYAE 116
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 114/285 (40%), Gaps = 35/285 (12%)
Query: 307 VLGKGTFGTAYKAALEDASTVV-VKRLKEVN---VGKREFEQQMEIVGGIRHENVVALRA 362
++G+G++G K +D +V +K+ E + + K+ ++++++ +RHEN+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 363 YYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXXTENGG 422
K +V+++ + + + G LD+ + N
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXE----VTDTRKAT 478
++H IK NI ++ G V + D + K
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 479 QASDVFSFGVLLLELLTGKSPIHATGG-DEVVHLVRWVNSVVREEWTA------------ 525
+A DV++ G L+ E+ G+ D++ H++ + +++
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 526 -EVFDVELL--RYPNIEEEMVEMLQVGMACVVRMPEERPKMADVL 567
E+ + E L RYP + E ++++ + C+ P++RP A++L
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAK---KCLHIDPDKRPFCAELL 305
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 28/222 (12%)
Query: 289 EGCNLVFDLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVK--RLKEVNVGKRE---FE 343
+G L FD+E +G+G+F T YK L+ +TV V L++ + K E F+
Sbjct: 24 DGRFLKFDIE---------IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFK 73
Query: 344 QQMEIVGGIRHENVVALRAYYYS--KDEK--LMVYDYFEPGSVSAMLHGRRGEGQSSL-D 398
++ E + G++H N+V + S K +K ++V + G++ L + L
Sbjct: 74 EEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS 133
Query: 399 WDTRVXXXXXXXXXXXXXXTENGGKLVHGGIKASNIFLNS-QGHVCVSDIXXXXXXXXXX 457
W ++ ++H +K NIF+ G V + D+
Sbjct: 134 WCRQILKGLQFLHTRTPP-------IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186
Query: 458 XXXXXXXXXXXXEVTDTRKATQASDVFSFGVLLLELLTGKSP 499
K ++ DV++FG LE T + P
Sbjct: 187 AKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 424 LVHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXXXXXEVTDTRKATQASDV 483
L++ +K N+ ++ QG++ V+D + ++ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDW 221
Query: 484 FSFGVLLLELLTGKSPIHA 502
++ GVL+ E+ G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 470 EVTDTRKATQASDVFSFGVLLLELLTGKSPIHATGGDE 507
EV + + A D++S GVLL +LTG +P A G D+
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDD 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 306 EVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKRE------FEQQMEIVGGIRHENVVA 359
E +G+GT+GT +KA + +V LK V + + +++ ++ ++H+N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 360 LRAYYYSKDEKLMVYDY 376
L +S + +V+++
Sbjct: 66 LHDVLHSDKKLTLVFEF 82
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 306 EVLGKGTFGTAYKAA-LEDASTVVVKRLKEVNVGKREFEQQMEIVGGI-RHENVVALRAY 363
E++G GT+G YK ++ +K + + E +Q++ ++ H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 364 YYSK------DEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXXXXXXXXXXX 417
+ K D+ +V ++ GSV+ ++ +G +W +
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAYICREILRGLSHL--- 145
Query: 418 TENGGKLVHGGIKASNIFLNSQGHVCVSD 446
+ K++H IK N+ L V + D
Sbjct: 146 --HQHKVIHRDIKGQNVLLTENAEVKLVD 172
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 296 DLEDLLRASAEVLGKGTFGTAYK-----AALEDASTVVVKRL---KEVNVGKREFEQQME 347
D+ED E LG G F K E A+ + KR V + E E+++
Sbjct: 9 DVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 348 IVGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
I+ IRH N++ L + +K + +++ + G + L
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 106
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 297 LEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFE--QQMEIVGGIRH 354
+EDL +G+GT+G YKA +D LK++ +++ ++ ++H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 355 ENVVALRAYYYSK-DEKL-MVYDYFE 378
NV++L+ + S D K+ +++DY E
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAE 103
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 305 AEVLGKGTFGTAYK-----AALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHEN 356
E LG G F K E A+ + KR V + E E+++ I+ IRH N
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
++ L + +K + +++ + G + L
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL 99
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 305 AEVLGKGTFG---------TAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHE 355
+ LG+G+FG T K AL+ ++ K++ + + E+++ + +RH
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 356 NVVALRAYYYSKDEKLMVYDY 376
+++ L SKDE +MV +Y
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY 85
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 305 AEVLGKGTFG---------TAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHE 355
+ LG+G+FG T K AL+ ++ K++ + + E+++ + +RH
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 356 NVVALRAYYYSKDEKLMVYDY 376
+++ L SKDE +MV +Y
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY 89
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 305 AEVLGKGTFGTAYK-----AALEDASTVVVKRL---KEVNVGKREFEQQMEIVGGIRHEN 356
E LG G F K E A+ + KR V + E E+++ I+ IRH N
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 357 VVALRAYYYSKDEKLMVYDYFEPGSVSAML 386
++ L + +K + +++ + G + L
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFL 120
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 305 AEVLGKGTFG---------TAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHE 355
+ LG+G+FG T K AL+ ++ K++ + + E+++ + +RH
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 356 NVVALRAYYYSKDEKLMVYDY 376
+++ L SKDE +MV +Y
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY 95
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 305 AEVLGKGTFG---------TAYKAALEDASTVVVKRLKEVNVGKREFEQQMEIVGGIRHE 355
+ LG+G+FG T K AL+ ++ K++ + + E+++ + +RH
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 356 NVVALRAYYYSKDEKLMVYDY 376
+++ L SKDE +MV +Y
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY 94
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 423 KLVHGGIKASNIFLNSQGHVCVSDIXXXX----XXXXXXXXXXXXXXXXXXEVTDTRK-- 476
K++H IK SN+ + GH+ ++D +++TRK
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF 216
Query: 477 ATQASDVFSFGVLLLELLTGKSP 499
+ +A DV++ GV L + G+ P
Sbjct: 217 SGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 112 FSKLENLTSLHLQFNSFSGPLPLDFSVWNNLTVIDLSNNFFNASI 156
F L L +L+L N S +P F N+LT ++L++N FN +
Sbjct: 98 FLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 425 VHGGIKASNIFLNSQGHVCVSDIXXXXXXXXXXXXXXXXXXX---XXXEVTDTRKATQAS 481
+H IKA+N+ L+ QG V ++D EV +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 482 DVFSFGVLLLELLTGKSP 499
D++S G+ +EL G+ P
Sbjct: 198 DIWSLGITAIELAKGEPP 215
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 296 DLEDLLRASAEVLGKGTFGTAYKAALEDASTVVVKRLKEVNVGKREFE-------QQMEI 348
D+E+ + E +G+GT+G YKA + VV LK++ + E E +++ +
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVA--LKKIRLDT-ETEGVPSTAIREISL 59
Query: 349 VGGIRHENVVALRAYYYSKDEKLMVYDYFEPGSVSAMLHGRRGEGQSSLDWDTRVXXXXX 408
+ + H N+V L +++++ +V+++ M S+L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-------DASALTGIPLPLIKSY 112
Query: 409 XXXXXXXXXTENGGKLVHGGIKASNIFLNSQGHVCVSDI 447
+ +++H +K N+ +N++G + ++D
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,111,857
Number of Sequences: 62578
Number of extensions: 518873
Number of successful extensions: 2591
Number of sequences better than 100.0: 544
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 1852
Number of HSP's gapped (non-prelim): 834
length of query: 615
length of database: 14,973,337
effective HSP length: 105
effective length of query: 510
effective length of database: 8,402,647
effective search space: 4285349970
effective search space used: 4285349970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)