Query 007169
Match_columns 615
No_of_seqs 416 out of 2805
Neff 9.5
Searched_HMMs 13730
Date Mon Mar 25 18:57:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007169.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007169hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 5.9E-71 4.3E-75 612.7 49.2 472 79-603 72-582 (643)
2 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 1.2E-69 9E-74 604.6 45.9 467 77-593 57-553 (640)
3 d1v25a_ e.23.1.1 (A:) Long cha 100.0 2.1E-69 1.5E-73 590.4 45.8 452 77-593 9-478 (534)
4 d1lcia_ e.23.1.1 (A:) Lucifera 100.0 6.7E-69 4.9E-73 587.0 49.0 469 78-605 16-504 (541)
5 d1amua_ e.23.1.1 (A:) Phenylal 100.0 3.4E-65 2.5E-69 554.1 43.0 441 74-603 18-478 (514)
6 d1mdba_ e.23.1.1 (A:) Dihydrox 100.0 1.1E-63 7.9E-68 544.9 42.3 457 79-606 25-498 (536)
7 d3cw9a1 e.23.1.1 (A:1-503) 4-c 100.0 2E-59 1.5E-63 505.9 48.1 453 78-606 1-471 (503)
8 d2cfxa2 d.58.4.2 (A:64-140) Tr 74.0 4.9 0.00035 28.1 6.8 44 558-602 15-58 (77)
9 d1pg4a_ e.23.1.1 (A:) Acetyl-C 71.2 8.4 0.00061 39.3 10.7 94 254-351 85-183 (643)
10 d1lcia_ e.23.1.1 (A:) Lucifera 70.3 4.2 0.0003 40.2 7.9 95 261-360 37-136 (541)
11 d1amua_ e.23.1.1 (A:) Phenylal 65.9 16 0.0012 35.4 11.3 95 254-358 36-135 (514)
12 d2ayia1 e.60.1.1 (A:3-408) Ami 62.3 9.2 0.00067 36.4 8.1 50 119-168 2-55 (406)
13 d1v25a_ e.23.1.1 (A:) Long cha 61.0 29 0.0021 33.6 12.3 99 254-358 24-127 (534)
14 d2cyya2 d.58.4.2 (A:65-150) Pu 60.1 11 0.00081 26.6 6.5 43 558-601 16-58 (86)
15 d3cw9a1 e.23.1.1 (A:1-503) 4-c 59.9 17 0.0012 34.7 10.1 91 254-352 15-110 (503)
16 d2cg4a2 d.58.4.2 (A:67-152) Re 59.6 12 0.00089 26.5 6.6 45 558-603 16-60 (86)
17 d1ry2a_ e.23.1.1 (A:) Acetyl-C 59.4 23 0.0017 35.6 11.3 95 254-352 72-172 (640)
18 d1b74a1 c.78.2.1 (A:1-105) Glu 51.6 37 0.0027 25.0 8.1 66 83-155 14-79 (105)
19 d1i1ga2 d.58.4.2 (A:62-141) Lp 49.6 9.4 0.00068 26.6 4.4 44 559-603 17-60 (80)
20 d1yb5a2 c.2.1.1 (A:121-294) Qu 49.0 40 0.0029 27.0 9.2 59 130-191 20-79 (174)
21 d1iz0a2 c.2.1.1 (A:99-269) Qui 48.6 19 0.0014 29.1 6.9 62 129-193 19-80 (171)
22 d1pl8a2 c.2.1.1 (A:146-316) Ke 48.5 55 0.004 26.0 10.0 62 128-193 17-79 (171)
23 d1mdba_ e.23.1.1 (A:) Dihydrox 44.7 42 0.0031 32.1 10.2 88 254-351 38-130 (536)
24 d1kola2 c.2.1.1 (A:161-355) Fo 43.2 37 0.0027 28.0 8.1 60 129-191 17-76 (195)
25 d1zjca1 e.60.1.1 (A:3-415) Ami 42.7 27 0.0019 33.0 7.7 50 119-168 2-55 (413)
26 d1llua2 c.2.1.1 (A:144-309) Al 42.4 54 0.0039 25.8 8.9 60 128-191 18-77 (166)
27 d1e0ca2 c.46.1.2 (A:136-271) S 42.3 15 0.0011 28.7 4.9 47 124-170 74-120 (136)
28 d1cdoa2 c.2.1.1 (A:165-339) Al 42.2 31 0.0023 27.7 7.4 58 132-192 23-80 (175)
29 d1e3ja2 c.2.1.1 (A:143-312) Ke 42.2 44 0.0032 26.5 8.3 60 129-192 18-77 (170)
30 d1c4oa2 c.37.1.19 (A:410-583) 41.7 48 0.0035 26.9 8.2 77 136-217 29-108 (174)
31 d1uufa2 c.2.1.1 (A:145-312) Hy 40.7 33 0.0024 27.4 7.2 62 128-193 21-82 (168)
32 d1s2ma2 c.37.1.19 (A:252-422) 39.6 84 0.0062 24.9 9.9 90 121-218 18-110 (171)
33 d1piwa2 c.2.1.1 (A:153-320) Ci 38.2 37 0.0027 27.1 7.1 63 128-194 18-80 (168)
34 d1jvba2 c.2.1.1 (A:144-313) Al 36.1 51 0.0037 26.1 7.7 62 128-192 18-80 (170)
35 d1uara2 c.46.1.2 (A:145-285) S 35.6 20 0.0015 28.0 4.8 46 125-170 76-122 (141)
36 d2fzwa2 c.2.1.1 (A:163-338) Al 35.2 37 0.0027 27.1 6.7 59 132-193 23-81 (176)
37 d1rjwa2 c.2.1.1 (A:138-305) Al 35.1 62 0.0045 25.3 8.1 62 128-193 18-79 (168)
38 d1mdoa_ c.67.1.4 (A:) Aminotra 34.6 24 0.0018 32.4 6.0 64 125-192 58-126 (376)
39 d1rhsa2 c.46.1.2 (A:150-293) R 32.4 24 0.0018 27.6 4.7 47 125-171 78-124 (144)
40 d1o69a_ c.67.1.4 (A:) Aminotra 32.2 24 0.0017 32.6 5.4 103 80-204 21-135 (374)
41 d2jhfa2 c.2.1.1 (A:164-339) Al 31.5 44 0.0032 26.7 6.5 58 132-192 23-80 (176)
42 d1t5la2 c.37.1.19 (A:415-595) 29.8 86 0.0063 25.3 8.1 76 137-217 30-108 (181)
43 d1urha2 c.46.1.2 (A:149-268) 3 28.5 25 0.0018 26.2 4.1 45 125-169 69-113 (120)
44 d1osda_ d.58.17.1 (A:) Mercuri 27.8 66 0.0048 21.3 5.8 49 558-608 18-69 (72)
45 d1udxa3 d.242.1.1 (A:341-416) 27.7 19 0.0014 24.9 2.7 23 122-144 44-66 (76)
46 d1v3va2 c.2.1.1 (A:113-294) Le 27.4 1.4E+02 0.01 23.6 9.7 62 129-193 20-82 (182)
47 d2cvba1 c.47.1.10 (A:2-188) Pr 26.3 18 0.0013 29.9 3.0 42 523-566 113-154 (187)
48 d1urha1 c.46.1.2 (A:2-148) 3-m 25.1 38 0.0028 26.5 4.7 42 123-164 70-112 (147)
49 d2bhsa1 c.79.1.1 (A:2-293) O-a 24.7 1.3E+02 0.0095 26.0 9.1 66 130-195 51-116 (292)
50 d2q4qa1 c.103.1.1 (A:2-122) Hy 24.7 86 0.0063 23.5 6.5 44 555-606 47-90 (121)
51 d1h2ba2 c.2.1.1 (A:155-326) Al 24.5 1.5E+02 0.011 23.1 9.9 57 134-193 29-85 (172)
52 d2fi9a1 c.103.1.1 (A:11-128) H 24.4 49 0.0036 24.7 5.0 46 554-606 42-87 (118)
53 d2fvta1 c.103.1.1 (A:1-127) Hy 24.1 46 0.0033 25.3 4.8 48 552-606 49-96 (127)
54 d1t5ia_ c.37.1.19 (A:) Spliceo 23.3 1.4E+02 0.011 23.3 8.3 89 121-217 13-104 (168)
55 d1okga1 c.46.1.2 (A:7-162) 3-m 23.3 66 0.0048 25.4 5.8 25 122-146 73-97 (156)
56 d2nyga1 c.140.1.2 (A:2-271) Un 22.6 26 0.0019 30.9 3.4 22 125-146 16-37 (270)
57 d1vj0a2 c.2.1.1 (A:156-337) Hy 21.8 1.1E+02 0.0078 24.3 7.3 61 128-192 18-80 (182)
58 d1gu7a2 c.2.1.1 (A:161-349) 2, 21.7 1E+02 0.0075 24.7 7.2 60 133-193 24-86 (189)
59 d1b9ha_ c.67.1.4 (A:) 3-amino- 20.6 43 0.0031 31.0 4.8 89 80-191 34-128 (384)
60 d1e3ia2 c.2.1.1 (A:168-341) Al 20.1 1.2E+02 0.0084 24.1 7.0 58 130-191 21-79 (174)
No 1
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=100.00 E-value=5.9e-71 Score=612.73 Aligned_cols=472 Identities=18% Similarity=0.265 Sum_probs=386.2
Q ss_pred CCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHH
Q 007169 79 GTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHAC 158 (615)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (615)
+-...+|.++++.+||++|+++. ....++.+++||+||.++++++|++|+++|+++||+|+|+++|++++++++|||
T Consensus 72 N~~~n~ldrh~~~~~d~~Ali~~---~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~ 148 (643)
T d1pg4a_ 72 NLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLAC 148 (643)
T ss_dssp CHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEEE---ecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHH
Confidence 34456777888999999999986 434456788999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccc---------hHHHHhhhc--cCCCceEEEEECCCCCCCCCCCc
Q 007169 159 SAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQT---------LNSLLSCLS--EVPTVRLIVVIGGIDDQIPSLPI 227 (615)
Q Consensus 159 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~---------~~~l~~~~~--~~~~l~~ii~~~~~~~~~~~~~~ 227 (615)
+++|++++|+++.++++++.+++++++++++|+++.. ...+..... ..+.++.++++.........
T Consensus 149 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~--- 225 (643)
T d1pg4a_ 149 ARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW--- 225 (643)
T ss_dssp HHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC---
T ss_pred HHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc---
Confidence 9999999999999999999999999999999997642 222222222 35667788887654322111
Q ss_pred CCCceEeeHHHHHhcCccCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHh-hccCcccCCCcEEEEcCCh
Q 007169 228 TTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAG-ATLGTKFYPSDVYISYLPL 306 (615)
Q Consensus 228 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~-~~~~~~~~~~d~~l~~lPl 306 (615)
.......+.+....... ...+...+++|+++|+|||||||.||||++||++++..... ....+++.++|++++++|+
T Consensus 226 -~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 303 (643)
T d1pg4a_ 226 -QEGRDLWWRDLIEKASP-EHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADV 303 (643)
T ss_dssp -CBTTEEEHHHHHTTSCS-CCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCT
T ss_pred -ccccchhhhhhhcccCc-ccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCCh
Confidence 11122344555443322 23445567899999999999999999999999997655443 3445788999999999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-----CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHH
Q 007169 307 AHIYERAN-QVMTVYSGVAVGFYQ-----GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAY 380 (615)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~i~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~ 380 (615)
+|++++.. .+.+|+.|+++++++ .++..+++.++++++|++.++|++++.|++.....
T Consensus 304 ~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~---------------- 367 (643)
T d1pg4a_ 304 GWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKA---------------- 367 (643)
T ss_dssp TSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGG----------------
T ss_pred HHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchh----------------
Confidence 99999876 456899999999986 37899999999999999999999999886521100
Q ss_pred HHHHHHHhcCCCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhC---CccccccccccccccccccCC
Q 007169 381 NAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFG---GRVTEGYGMTETSCLISQLDE 457 (615)
Q Consensus 381 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g---~~v~~~YG~TE~~~~~~~~~~ 457 (615)
.+....++||.+++||+|+++++.+++.+.++ +++++.||+||+++.++...+
T Consensus 368 ------------------------~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~ 423 (643)
T d1pg4a_ 368 ------------------------IEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLP 423 (643)
T ss_dssp ------------------------TTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCT
T ss_pred ------------------------ccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEecCC
Confidence 01111258999999999999999999999884 779999999999877665544
Q ss_pred CC--CCCCCcCCCCCCeeEEEeecCCCCCCCCCCCCCcceEEEec--CcccccccCChhhhhhcc--CCCCeeecccEEE
Q 007169 458 GD--NLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRG--PLIFKGYYKDEIQTKEVI--DEDGWFHTGDIGM 531 (615)
Q Consensus 458 ~~--~~~~~vG~p~~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg--~~v~~GY~~~~~~t~~~~--~~~gw~~TGDlg~ 531 (615)
.. .+.+++|+|++|++++|+| ++++.++.++ .|||+|+| |+++.|||++++.+.+.+ ..+|||+|||+|+
T Consensus 424 ~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~~~g~---~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~ 499 (643)
T d1pg4a_ 424 GAIELKAGSATRPFFGVQPALVD-NEGHPQEGAT---EGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGAR 499 (643)
T ss_dssp TTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSE---EEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEE
T ss_pred CccCCCCCccccccCCCEEEEEC-CCCCCCCCCc---eEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEE
Confidence 33 5678999999999999999 5667777776 89999999 578999999999888765 3589999999999
Q ss_pred EecCCcEEEEccCCCeEEcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeCH---------HHHHHH
Q 007169 532 WIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVDQ---------DALKAW 599 (615)
Q Consensus 532 ~~~dG~l~i~GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~ 599 (615)
+|+||+|+|+||+||+||+ +|++|+|.|||++|.+||+|.||+|+|.+++ +.++|+|++++ .+++++
T Consensus 500 ~d~dG~l~i~GR~dd~ik~-~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~ 578 (643)
T d1pg4a_ 500 RDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNW 578 (643)
T ss_dssp ECTTSCEEEEEESSSEEEE-TTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred ECCCceEEEecccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 9999999999999999997 8999999999999999999999999997654 58999999753 267888
Q ss_pred HHHc
Q 007169 600 AASE 603 (615)
Q Consensus 600 ~~~~ 603 (615)
++++
T Consensus 579 ~~~~ 582 (643)
T d1pg4a_ 579 VRKE 582 (643)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8875
No 2
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.2e-69 Score=604.60 Aligned_cols=467 Identities=18% Similarity=0.238 Sum_probs=376.5
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHhHHHHH
Q 007169 77 EIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLI-YHGISKGSCIGLYFVNRPEWLIVD 155 (615)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~Gv~~gd~V~i~~~n~~e~~~~~ 155 (615)
..+..+.+|+++++++||++|+++. ..+.+..+++||+||.++++++|++|+ ++|+++||+|+|+++|++||++++
T Consensus 57 ~lN~~~n~ldr~a~~~pd~~Ali~~---~~~~g~~~~~Ty~eL~~~v~~~A~~L~~~~Gv~~Gd~V~i~~~n~~e~~~~~ 133 (640)
T d1ry2a_ 57 QLNACYNCVDRHALKTPNKKAIIFE---GDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITL 133 (640)
T ss_dssp EECHHHHHTHHHHTTCTTSEEEEEE---CSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHH
T ss_pred chhHHHHHHHHHHhhCCCCEEEEEE---ecCCCCeeEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHH
Confidence 3455688899999999999999986 444456688999999999999999997 679999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccc---------hHHHHhhhccCCCceEEEEECCCCCCCCCCC
Q 007169 156 HACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQT---------LNSLLSCLSEVPTVRLIVVIGGIDDQIPSLP 226 (615)
Q Consensus 156 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~---------~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~ 226 (615)
|||+++|++++|+++.++++++.++++++++++++++... ...+.+.......+.....+..........
T Consensus 134 lA~~~~Gav~vpi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (640)
T d1ry2a_ 134 LAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAF- 212 (640)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCC-
T ss_pred HHhccCceEeecCCCCCCHHHHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeecccccccccc-
Confidence 9999999999999999999999999999999999998643 233444444555666666554432211111
Q ss_pred cCCCceEeeHHHHHhcCccCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhc-cCcccCCCcEEEEcCC
Q 007169 227 ITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGAT-LGTKFYPSDVYISYLP 305 (615)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~-~~~~~~~~d~~l~~lP 305 (615)
.......+....... .......+..++|+++|+|||||||.||||+++|++++....... ..+.+.++|++++++|
T Consensus 213 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l~~~p 289 (640)
T d1ry2a_ 213 --HAPRDLDWATEKKKY-KTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGD 289 (640)
T ss_dssp --CSSSEEEHHHHHTTS-CSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSC
T ss_pred --ccccccccccccccc-ccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCcccceeeccc
Confidence 111122333333222 223344556789999999999999999999999999877655443 3467889999999999
Q ss_pred hHHHHHHHH-HHHHHHhCcEEEEec-----CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHH
Q 007169 306 LAHIYERAN-QVMTVYSGVAVGFYQ-----GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAA 379 (615)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~i~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a 379 (615)
++|+++... .+.+++.|+++++++ .++..+++.|+++++|++.++|++++.|.+....
T Consensus 290 l~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---------------- 353 (640)
T d1ry2a_ 290 IGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDS---------------- 353 (640)
T ss_dssp TTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTT----------------
T ss_pred hhhhhhHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHhCccEEEcChHHHHHHHhcccc----------------
Confidence 999999875 556899999998876 3789999999999999999999999877541000
Q ss_pred HHHHHHHHhcCCCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhC---CccccccccccccccccccC
Q 007169 380 YNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFG---GRVTEGYGMTETSCLISQLD 456 (615)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g---~~v~~~YG~TE~~~~~~~~~ 456 (615)
...+...++||.+++||+++++++.+++++.+| +.++++||+||++...+...
T Consensus 354 ------------------------~~~~~~l~sLr~v~~gG~~l~~~~~~~~~~~~g~~~~~i~~~yg~te~~~~~~~~~ 409 (640)
T d1ry2a_ 354 ------------------------YIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPL 409 (640)
T ss_dssp ------------------------SSSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECC
T ss_pred ------------------------ccccCCCCceEEEEEecccCcHHHHHHHHHhcCCCcceEEeeeccccccccccccc
Confidence 000111258999999999999999999999886 46899999999987666544
Q ss_pred CCC---CCCCCcCCCCCCeeEEEeecCCCCCCCCCCCCCcceEEEec--CcccccccCChhhhhhcc--CCCCeeecccE
Q 007169 457 EGD---NLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRG--PLIFKGYYKDEIQTKEVI--DEDGWFHTGDI 529 (615)
Q Consensus 457 ~~~---~~~~~vG~p~~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg--~~v~~GY~~~~~~t~~~~--~~~gw~~TGDl 529 (615)
... .+.+++|.|+++++++|+|.+++....... ..|||+++| |+++.|||+|++.|.+.| +.+|||+|||+
T Consensus 410 ~~~~~~~~~gs~G~p~~g~~~~i~d~~~~~~~~~~~--~~Gel~i~~~~p~~~~gy~~~~e~t~~~~~~~~~gw~~TGDl 487 (640)
T d1ry2a_ 410 AGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSH--AEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDG 487 (640)
T ss_dssp TTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSS--CEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEE
T ss_pred CCCcCCCCCcccccccCCceEEEEeCCCCcccCCCC--ceEEEEEEecCCCcccccccCHHHHHhhhccCCCCeEEcCCc
Confidence 332 567899999999999999965554433333 379999998 689999999999999887 45699999999
Q ss_pred EEEecCCcEEEEccCCCeEEcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeCH
Q 007169 530 GMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVDQ 593 (615)
Q Consensus 530 g~~~~dG~l~i~GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~ 593 (615)
|++|+||+|+|+||+||+||+ +|++|+|.+||++|.+||+|.||+|+|.+++ +.++|+|++.+
T Consensus 488 g~~d~dG~l~i~GR~dd~Ik~-~G~~I~p~eIE~~l~~~p~V~~a~Vvg~~d~~~ge~~~a~Vv~~~ 553 (640)
T d1ry2a_ 488 AAKDKDGYIWILGRVDDVVNV-SGHRLSTAEIEAAIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKN 553 (640)
T ss_dssp EEECTTCCEEECSCTTSCBCS-SSCCBCHHHHHHHHHSSTTEEEEEEECCCCCTTSCCCEEEEEEC-
T ss_pred eeECCCCCEEEEEcCCCEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCeEEEEEEEEcC
Confidence 999999999999999999996 8999999999999999999999999997754 57999999865
No 3
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.1e-69 Score=590.38 Aligned_cols=452 Identities=25% Similarity=0.319 Sum_probs=371.0
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHH
Q 007169 77 EIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDH 156 (615)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 156 (615)
+..||+++|+++++++||++|+++. + .++.+++||+||++++.++|++|.+.|+++||+|+|+++|+++|++++|
T Consensus 9 ~~~~l~~~l~~~a~~~pd~~av~~~---~--~g~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 83 (534)
T d1v25a_ 9 EELNLWDFLERAAALFGRKEVVSRL---H--TGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYF 83 (534)
T ss_dssp CCCCTHHHHHHHHHHSTTCEEEEEC---T--TSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCeEEEEe---c--CCceEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCCHHHHHHHH
Confidence 3458999999999999999999876 2 3456789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccchHHHHhhhccCCCceEEEEECCCCCCCCCCCcCCCceEeeH
Q 007169 157 ACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTY 236 (615)
Q Consensus 157 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (615)
||+++|++++|+++.++.+++.++|+++++++++++.............++.++.++......... ....
T Consensus 84 A~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 153 (534)
T d1v25a_ 84 AVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEG----------YLAY 153 (534)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTT----------CEEH
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeecccccc----------cccc
Confidence 999999999999999999999999999999999999999988888888888887777655432110 1111
Q ss_pred HHHHhcCccCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhc--cCcccCCCcEEEEcCChHHHHHHHH
Q 007169 237 SNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGAT--LGTKFYPSDVYISYLPLAHIYERAN 314 (615)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~--~~~~~~~~d~~l~~lPl~h~~~~~~ 314 (615)
... . ....+.....++++++|+|||||||.||||+++|.+++....... ..+.+..+|++++.+|++|.+++..
T Consensus 154 ~~~-~---~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~ 229 (534)
T d1v25a_ 154 EEA-L---GEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL 229 (534)
T ss_dssp HHH-C---CSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH
T ss_pred ccc-c---cccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccccc
Confidence 111 1 112234456788999999999999999999999999987665443 3356788999999999999999998
Q ss_pred HHHHHHhCcEEEEec--CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhcCCC
Q 007169 315 QVMTVYSGVAVGFYQ--GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKN 392 (615)
Q Consensus 315 ~~~~l~~G~~i~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 392 (615)
.+..+..|++.++.. .++..+...+.++++|++.++|.++..+.+.....
T Consensus 230 ~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~~~~---------------------------- 281 (534)
T d1v25a_ 230 PYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLEST---------------------------- 281 (534)
T ss_dssp HHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHH----------------------------
T ss_pred cceeeeecceeeeccccccccccchhhhhccccccccCchhhhhhhhhhccc----------------------------
Confidence 888888888887765 79999999999999999999999999887642211
Q ss_pred CCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCccccccccccccccccccCCCC-----------CC
Q 007169 393 PSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGD-----------NL 461 (615)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~-----------~~ 461 (615)
....++||.+++||++++++..+++++ ++.+++++||+||++..++...... ..
T Consensus 282 --------------~~~~~~lr~~~~gG~~~~~~~~~~~~~-~~~~i~~~yG~te~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (534)
T d1v25a_ 282 --------------GHRLKTLRRLVVGGSAAPRSLIARFER-MGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTL 346 (534)
T ss_dssp --------------TCCCSSCCEEEECSSCCCHHHHHHHHH-TTCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHH
T ss_pred --------------cccccceeEEEEecCCCCHHHHHHHHH-hCCeeeeeccccccccceeecccCccccccCccccccc
Confidence 112268999999999999999999986 5899999999999998776554332 12
Q ss_pred CCCcCCCCCCeeEEEeecCCCCCCCCCCCCCcceEEEecCcccccccCChhhhhhccCCCCeeecccEEEEecCCcEEEE
Q 007169 462 SGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKII 541 (615)
Q Consensus 462 ~~~vG~p~~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~ 541 (615)
.+++|+|++|++++|+| ++++.++.+.. +.|||+|+|++++.|||++++.|++.|..||||+|||+|++|+||+|+++
T Consensus 347 ~~~~G~p~~g~~~~i~d-~~~~~~~~~~~-~~Gel~v~g~~v~~gY~~~~~~t~~~~~~dg~~~TGDlg~~~~~G~l~~~ 424 (534)
T d1v25a_ 347 KAKTGLPIPLVRLRVAD-EEGRPVPKDGK-ALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIK 424 (534)
T ss_dssp HTSCBEECTTCEEEEEC-TTSCBCCSSSC-CCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEE
T ss_pred cccceeccCCcEEEEEC-CCCCCCCCCCC-eeEEEEEcCCcccceecCChhhhhhhcccCCCCccCceeEECCCccEEEe
Confidence 47899999999999999 55666555321 38999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeCH
Q 007169 542 DRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVDQ 593 (615)
Q Consensus 542 GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~ 593 (615)
||+||+||+ +|++|+|.+||++|.+||+|.||+|+|.+++ +.++|+|+++.
T Consensus 425 GR~~~~i~~-~G~~v~~~eIE~~l~~~~~V~~a~v~~~~~~~~~~~l~a~vv~~~ 478 (534)
T d1v25a_ 425 DRLKDLIKS-GGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRG 478 (534)
T ss_dssp EESSCEEEE-TTEEEEHHHHHCC----------CEEEEECSSSSEEEEECC----
T ss_pred cccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEEEEEEEeCC
Confidence 999999996 8999999999999999999999999997654 47899998753
No 4
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=100.00 E-value=6.7e-69 Score=587.00 Aligned_cols=469 Identities=22% Similarity=0.322 Sum_probs=385.6
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHH
Q 007169 78 IGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHA 157 (615)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 157 (615)
..|+.++|.+++++|+++|+.+.. .++. ..+.+||+||++++.++|++|.++|+++||+|+|+++|+++|+++++|
T Consensus 16 ~~t~~~~l~~~~~~~~~~P~~~a~--~d~~--~~~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns~e~~v~~lA 91 (541)
T d1lcia_ 16 DGTAGEQLHKAMKRYALVPGTIAF--TDAH--IEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLG 91 (541)
T ss_dssp SSCHHHHHHHHHHHHHTSTTCEEE--EETT--TCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCSSTHHHHHH
T ss_pred CCCHHHHHHHHHHhhCCCCCeEEE--EeCC--CCeEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHHHHHHH
Confidence 368999999999999665544322 1222 124699999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccchHHHHhhhccCCCceEEEEECCCCCCCCCCCcCCCceEeeHH
Q 007169 158 CSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYS 237 (615)
Q Consensus 158 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (615)
|+++|++++|+++.++.+++.++|++++++++|++.+..+.+.++...++.++.+++++...+. ..+..+.
T Consensus 92 ~~~~G~i~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 162 (541)
T d1lcia_ 92 ALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDY---------QGFQSMY 162 (541)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCB---------TTBEEHH
T ss_pred HHHhCeEEEecCCCCCHHHHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccc---------cccchhh
Confidence 9999999999999999999999999999999999999999999988889999988887653321 1123333
Q ss_pred HHHhcCc------cCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhccC---cccCCCcEEEEcCChHH
Q 007169 238 NLLSQGR------SNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLG---TKFYPSDVYISYLPLAH 308 (615)
Q Consensus 238 ~l~~~~~------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~lPl~h 308 (615)
+...... ....+.....++++++|+|||||||.||||++||++++......... ..+.+++++++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 242 (541)
T d1lcia_ 163 TFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHH 242 (541)
T ss_dssp HHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTS
T ss_pred hhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhcccccccccccccccccccc
Confidence 3322111 11122334567899999999999999999999999998876655443 45778999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEec-CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHH
Q 007169 309 IYERANQVMTVYSGVAVGFYQ-GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAM 387 (615)
Q Consensus 309 ~~~~~~~~~~l~~G~~i~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 387 (615)
.++....+..+..|+...... .+.......+..+++|.+..+|.++..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~------------------------- 297 (541)
T d1lcia_ 243 GFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTL------------------------- 297 (541)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEECCHHHHHHHHHCSC-------------------------
T ss_pred cccccccccccccccccccccccccchhHHHHhhhhccccccCcccccccccccc-------------------------
Confidence 999988888888888877766 788999999999999999999999988865210
Q ss_pred hcCCCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCC-ccccccccccccccccccCCCCCCCCCcC
Q 007169 388 LSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGG-RVTEGYGMTETSCLISQLDEGDNLSGHVG 466 (615)
Q Consensus 388 ~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g~-~v~~~YG~TE~~~~~~~~~~~~~~~~~vG 466 (615)
.......++|.+++||++++++..+++.+.++. .++++||+||+++.++.....+...+++|
T Consensus 298 -----------------~~~~~~~~l~~v~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~svG 360 (541)
T d1lcia_ 298 -----------------IDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVG 360 (541)
T ss_dssp -----------------GGGSCCTTCCEEECTTCCCCHHHHHHHHHHTTCSCCBCEECCGGGSSCSEECCCC---CCCCB
T ss_pred -----------------ccccccccceEEEecccccccccccccccccCCceeeecCCccccCceEEecCcccCCCCccc
Confidence 011112589999999999999999999998865 68999999999988888877778889999
Q ss_pred CCCCCeeEEEeecCCCCCCCCCCCCCcceEEEecCcccccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCC
Q 007169 467 SPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKN 546 (615)
Q Consensus 467 ~p~~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (615)
+|+|+++++|+|++++..++.|+ .|||+|+|++++.||+++++.+...+..+|||+|||+|++|+||.++++||+||
T Consensus 361 ~p~~~~~~~i~d~d~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~~~~~GR~~d 437 (541)
T d1lcia_ 361 KVVPFFEAKVVDLDTGKTLGVNQ---RGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKS 437 (541)
T ss_dssp EECTTCEEEEECTTTCCBCCTTC---CEEEEEESTTSCSEETTBHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC-----
T ss_pred cccCCCEEEEEECCCCcCCCCCC---eEEEEEccCccCCeeCCChhhhhhcccCCccccCCCeeEEcCCeEEEEeeeecC
Confidence 99999999999988888888887 899999999999999999999999998899999999999999999999999999
Q ss_pred eEEcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeC------HHHHHHHHHHcCC
Q 007169 547 IFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVD------QDALKAWAASEGI 605 (615)
Q Consensus 547 ~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~~ 605 (615)
+||+ +|++|+|.+||++|.+||+|.+|+|+|.+++ +.++|+|+++ .+++.++++++..
T Consensus 438 ~i~~-~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~ 504 (541)
T d1lcia_ 438 LIKY-KGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVT 504 (541)
T ss_dssp CEEE-TTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHHSC
T ss_pred EEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHhCC
Confidence 9997 8999999999999999999999999996543 4788999864 4789999988654
No 5
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=100.00 E-value=3.4e-65 Score=554.10 Aligned_cols=441 Identities=19% Similarity=0.270 Sum_probs=369.6
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHH
Q 007169 74 DHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLI 153 (615)
Q Consensus 74 ~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~ 153 (615)
+.|...||.++|+++|+++||++|+++. + +.+||+||.++++++|.+|+++|+++||+|+|+++|+++|++
T Consensus 18 ~~~~~~tl~~l~~~~a~~~Pd~~Al~~~---~------~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~~~v~ 88 (514)
T d1amua_ 18 EYPRDKTIHQLFEEQVSKRPNNVAIVCE---N------EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFI 88 (514)
T ss_dssp CCCTTCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHH
T ss_pred CCCCCCcHHHHHHHHHHhCCCCeEEEEC---C------eeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHHHH
Confidence 3467899999999999999999999863 2 469999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccchHHHHhhhccCCCceEEEEECCCCCCCCCCCcCCCceE
Q 007169 154 VDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQI 233 (615)
Q Consensus 154 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (615)
+++||+++|++++|+++.++.+++.+++++++++++|++....+.+..... ... .......
T Consensus 89 ~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~---~~~-~~~~~~~--------------- 149 (514)
T d1amua_ 89 GILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF---NGQ-VEIFEED--------------- 149 (514)
T ss_dssp HHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC---CSE-EEECCCS---------------
T ss_pred HHHHHHHhCcEEEEeCCCCCHHHHHHHHhccCCcEEEEehhhhhhhhhhcc---ccc-ccccccc---------------
Confidence 999999999999999999999999999999999999999887766543321 111 1111110
Q ss_pred eeHHHHHhcCccCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhccCcccCCCcEEEEcCChHHHHHHH
Q 007169 234 LTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERA 313 (615)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~ 313 (615)
............+..++++++|+|||||||.||+|++||+++...+...........+|++++.+|++|.+++.
T Consensus 150 ------~~~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~ 223 (514)
T d1amua_ 150 ------TIKIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVW 223 (514)
T ss_dssp ------TTTTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHH
T ss_pred ------cccccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceeccccccccc
Confidence 00111112233456789999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHhCcEEEEec----CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhc
Q 007169 314 NQVMTVYSGVAVGFYQ----GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLS 389 (615)
Q Consensus 314 ~~~~~l~~G~~i~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 389 (615)
..+.++..|+++++.. .+....++.+....++.+..+|.......
T Consensus 224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 272 (514)
T d1amua_ 224 EMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLD------------------------------- 272 (514)
T ss_dssp HHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSC-------------------------------
T ss_pred cccccccccccccccccccccchhhhhhhhhhhhcccccceeeeccccc-------------------------------
Confidence 8888999999998875 57788888999999999999986543211
Q ss_pred CCCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCccccccccccccccccccCCCC---CCCCCcC
Q 007169 390 GKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGD---NLSGHVG 466 (615)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~---~~~~~vG 466 (615)
.....+++.+++||+++++++.+++.. ++.+++.||+||++.+++...... ...++.|
T Consensus 273 -----------------~~~~~~l~~~~~~G~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~ 333 (514)
T d1amua_ 273 -----------------PERILSIQTLITAGSATSPSLVNKWKE--KVTYINAYGPTETTICATTWVATKETIGHSVPIG 333 (514)
T ss_dssp -----------------TTTCCSCSEEEEESSCCCHHHHHHHTT--TSEEEEEECCGGGSSCSEEEECCSSCCCSSCCCB
T ss_pred -----------------ccccccccEEEEecccCCHHHhhhhcc--ceeEEEeeccccCceeeeeccccccccCcccccc
Confidence 011258999999999999999987765 678999999999998776554443 3456788
Q ss_pred CCCCCeeEEEeecCCCCCCCCCCCCCcceEEEecCcccccccCChhhhhhcc------CCCCeeecccEEEEecCCcEEE
Q 007169 467 SPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVI------DEDGWFHTGDIGMWIPGGRLKI 540 (615)
Q Consensus 467 ~p~~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg~~v~~GY~~~~~~t~~~~------~~~gw~~TGDlg~~~~dG~l~i 540 (615)
.+.++.++++.| ++++.++.|+ .|||+|+|+++++|||++++.+.+.| +.+|||+|||+|++|+||+|+|
T Consensus 334 ~~~~~~~v~~~d-~~~~~~~~g~---~GEl~v~~~~~~~gY~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~l~i 409 (514)
T d1amua_ 334 APIQNTQIYIVD-ENLQLKSVGE---AGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEY 409 (514)
T ss_dssp EECTTEEEEEEC-TTSCBCCTTC---EEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEE
T ss_pred cceeeeeEeeec-ccceecCCCC---eeEEEEccCcccccccccccccceeeEeccccCCCceEEECCEEEECCCCcEEE
Confidence 999999999999 7777888887 89999999999999999999999887 4578999999999999999999
Q ss_pred EccCCCeEEcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeCH----HHHHHHHHHc
Q 007169 541 IDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVDQ----DALKAWAASE 603 (615)
Q Consensus 541 ~GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~----~~l~~~~~~~ 603 (615)
+||+||+||+ +|++|+|++||++|.+||+|.||+|+|.+++ +.++|+|++++ ++++++++++
T Consensus 410 ~GR~~d~i~~-~G~~i~p~~IE~~l~~~~~V~~~~V~~~~~~~~g~~~~a~v~~~~~~~~~~l~~~~~~~ 478 (514)
T d1amua_ 410 LGRIDNQVKI-RGHRVELEEVESILLKHMYISETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEE 478 (514)
T ss_dssp EEEGGGEEEE-TTEEEEHHHHHHHHTTSTTEEEEEEEEEECTTSCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred EecccCEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCEEEEEEEEcCCCCCHHHHHHHHHhh
Confidence 9999999997 8999999999999999999999999997654 47899999864 6888888764
No 6
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=1.1e-63 Score=544.85 Aligned_cols=457 Identities=21% Similarity=0.263 Sum_probs=378.1
Q ss_pred CCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHH
Q 007169 79 GTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHAC 158 (615)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (615)
.|+.++|+++|+++||++|+.+. + +.+||+||+++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 25 ~tl~~~l~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~ 95 (536)
T d1mdba_ 25 ETFGDLLRDRAAKYGDRIAITCG---N------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFAL 95 (536)
T ss_dssp CCHHHHHHHHHHHHTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC---C------EeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHHHHHHHHH
Confidence 69999999999999999999764 3 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccchH-----HHHhhhccCCCceEEEEECCCCCCCCCCCcCCCceE
Q 007169 159 SAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLN-----SLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQI 233 (615)
Q Consensus 159 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~-----~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (615)
+++|++++|+++.++.+++.++|+++++++++++..... .........+.+...+...... ..
T Consensus 96 ~~~G~i~vpl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 163 (536)
T d1mdba_ 96 FRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE------------EF 163 (536)
T ss_dssp HHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT------------TS
T ss_pred HHhCcEEEecCCCCCHHHHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeeccc------------cc
Confidence 999999999999999999999999999999999864332 1111122234443333332211 11
Q ss_pred eeHHHHHhcCccCCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhccCcccCCCcEEEEcCChHHHHHHH
Q 007169 234 LTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERA 313 (615)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~ 313 (615)
..++++. ......++..++|+++|+|||||||.||||++||+++.+.+......+.+.++|++++.+|++|.+++.
T Consensus 164 ~~~~~~~----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~ 239 (536)
T d1mdba_ 164 LPLEDLH----TEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLS 239 (536)
T ss_dssp EEGGGCC----CCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHH
T ss_pred cchhhcc----cCCcCCCccCccchHHhhhcccccccceeccccccccccccccccccccccccccccccccccccccee
Confidence 2222221 122334456789999999999999999999999999999999888888999999999999999999986
Q ss_pred H-HH-HHHHhCcEEEEec-CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhcC
Q 007169 314 N-QV-MTVYSGVAVGFYQ-GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSG 390 (615)
Q Consensus 314 ~-~~-~~l~~G~~i~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 390 (615)
. .+ ..+..|++++..+ +++..++..+++++++.+..+|..+..+.......
T Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 293 (536)
T d1mdba_ 240 SPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSR-------------------------- 293 (536)
T ss_dssp SSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHC--------------------------
T ss_pred eccccccccccccccccCCCCHHHHHHHHhhhccccccccchhhhhhhhhcccc--------------------------
Confidence 4 33 3455567666665 79999999999999999999999998876632211
Q ss_pred CCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCccccccccccccccccccCCC-CCCCCCcCCCC
Q 007169 391 KNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEG-DNLSGHVGSPN 469 (615)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~ 469 (615)
....++++.+++||+++++...+++.+.++......||.+|.+......... ....+++|.|+
T Consensus 294 ----------------~~~~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~ 357 (536)
T d1mdba_ 294 ----------------RDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPM 357 (536)
T ss_dssp ----------------CCCCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEES
T ss_pred ----------------ccccCcceeEEEeccccccccccchhhccCceeeeccccccccccccccccccccccCCcccCC
Confidence 1112589999999999999999999999999999999999987655543332 24567899998
Q ss_pred CCeeEEEeecCCCCCCCCCCCCCcceEEEecCcccccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 007169 470 AACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFK 549 (615)
Q Consensus 470 ~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (615)
++....+++.++++.++.++ .|||+++|+.++.||+++++.+...++++|||+|||+|++|+||+|+++||+||+||
T Consensus 358 ~~~~~~~v~~~~g~~~~~~~---~Gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~~tGD~~~~~~dG~l~~~GR~~d~i~ 434 (536)
T d1mdba_ 358 SPYDESRVWDDHDRDVKPGE---TGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQIN 434 (536)
T ss_dssp STTCEEEEECTTSCBCCTTC---CEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEE
T ss_pred CCcceEEEEcCCCCeecccc---cceeecCCCccccccccccccccccccccCccccCccccccCCCceecCCCcceEEE
Confidence 76666666657777777776 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEe-----CHHHHHHHHHHcCCC
Q 007169 550 LAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSV-----DQDALKAWAASEGIQ 606 (615)
Q Consensus 550 l~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~-----~~~~l~~~~~~~~~~ 606 (615)
+ +|++|+|.+||++|.+||+|.+|+|+|.+++ +.++|+|++ +++++++++++++++
T Consensus 435 ~-~G~~i~p~~IE~~l~~~p~V~~a~vvg~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~~l~ 498 (536)
T d1mdba_ 435 R-GGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLA 498 (536)
T ss_dssp C-SSCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHHHHHHTTCC
T ss_pred E-CCEEECHHHHHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 6 8999999999999999999999999997643 468999986 457899999988764
No 7
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=100.00 E-value=2e-59 Score=505.90 Aligned_cols=453 Identities=19% Similarity=0.218 Sum_probs=366.2
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHH
Q 007169 78 IGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHA 157 (615)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 157 (615)
++|++++|+++++++||++|+.+. ++. +++||+||.+++.++|++|+++|+++||+|+|+++|+++|++++||
T Consensus 1 ~~ti~~~l~~~a~~~pd~~al~~~---~~~----~~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA 73 (503)
T d3cw9a1 1 MQTVNEMLRRAATRAPDHCALAVP---ARG----LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILA 73 (503)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEEG---GGT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEC---CCC----cEEeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHHHHHHH
Confidence 479999999999999999999875 322 5699999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccchHHHHhhhccCCCceEEEEECCCCCCCCCCCcCCCceEeeHH
Q 007169 158 CSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYS 237 (615)
Q Consensus 158 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (615)
|+++|++++|+++.++++++.+++++++++++|++..... ........... .++. +.
T Consensus 74 ~~~~G~v~vpi~~~~~~~~i~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~-~~i~---------------------~~ 130 (503)
T d3cw9a1 74 LHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQV-ADAIFQSGSGA-RIIF---------------------LG 130 (503)
T ss_dssp HHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEESSCHHH-HHHHHHTTCCC-EEEE---------------------HH
T ss_pred HHHhCcEEEEeCCCCCHHHHHHHHHhcCCcEEEeecchHH-HHHHhhhcccc-cccc---------------------ch
Confidence 9999999999999999999999999999999999875422 11222122222 2332 23
Q ss_pred HHHhcCcc----CCCCCCCCCCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhccCc--ccCCCcEEEEcCChHHHHH
Q 007169 238 NLLSQGRS----NLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGT--KFYPSDVYISYLPLAHIYE 311 (615)
Q Consensus 238 ~l~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~--~~~~~d~~l~~lPl~h~~~ 311 (615)
++...+.. ........+++++++++|||||||.||+|+++|+++.+.+......+ .....+++++.+|++|.++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (503)
T d3cw9a1 131 DLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVG 210 (503)
T ss_dssp HHEETTEECCCSCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHH
T ss_pred hhhhhhcccccCCccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCccccccc
Confidence 33222111 12233456789999999999999999999999999998887766543 4456789999999999888
Q ss_pred HHH-HHHHHHhCcEEEEec-CChHHHHHHHHhhCCeEEeechHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhc
Q 007169 312 RAN-QVMTVYSGVAVGFYQ-GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLS 389 (615)
Q Consensus 312 ~~~-~~~~l~~G~~i~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 389 (615)
... .+.+...++.+++.+ +++..+...+..++++.+..+|..+..+........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 266 (503)
T d3cw9a1 211 FFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAG------------------------ 266 (503)
T ss_dssp HHTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHHHTC------------------------
T ss_pred cccccccccccccccccccccChHHhhhhhhhceeecccccccccccccccccccc------------------------
Confidence 775 445666677766665 899999999999999999999999887765322111
Q ss_pred CCCCCchhhHHhHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCccccccccccccccccccCCCCCCCCCcCCCC
Q 007169 390 GKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPN 469 (615)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gg~~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~ 469 (615)
++...++||.+++||+++++++..+++..++..+.+.||+||++..+...........+.+.+.
T Consensus 267 ----------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~yg~~e~~~~~~~~~~~~~~~~~~~~~~ 330 (503)
T d3cw9a1 267 ----------------SSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAMNSLYMRQPKTGTEMAPGFFS 330 (503)
T ss_dssp ----------------TTCCCTTCCEEEECSSCCCHHHHHHHHHHCCSEEEEEEEETTTEEEEEEESCSSSSEEBCCTTC
T ss_pred ----------------ccccccceEEEEeccccccccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 1112358999999999999999999999999999999999999887776665555555555555
Q ss_pred CCeeEEEeecCCCCCCCCCCCCCcceEEEec-CcccccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeE
Q 007169 470 AACEIKLVDVPEMNYTSEDQPCPRGEICVRG-PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIF 548 (615)
Q Consensus 470 ~~~ev~ivd~~~~~~~~~~~~~~~GEi~vrg-~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~i 548 (615)
+...+.+.+ ..++.++.|+ .|++++++ +....||+++++.|.+.| .+|||+|||+|++|+||.|+++||+||+|
T Consensus 331 ~~~~~~~~~-~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~t~~~~-~~g~~~TgD~g~~~~dG~l~~~GR~~d~i 405 (503)
T d3cw9a1 331 EVRIVRIGG-GVDEIVANGE---EGELIVAASDSAFVGYLNQPQATAEKL-QDGWYRTSDVAVWTPEGTVRILGRVDDMI 405 (503)
T ss_dssp CEEEECTTS-CTTCBCCTTC---CEEEEEECCTTSCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEESSCCE
T ss_pred cceeeeeec-ccCcccCCCc---cccccccccccccccccCChhhhHHHh-cCCceecccccccccCCeEEeCCCcCCeE
Confidence 555444444 5556666676 78777765 456778999999999999 78999999999999999999999999999
Q ss_pred EcCCeeeechHHHHHHHhcCCCcceEEEEeeCCC---CeEEEEEEeC------HHHHHHHHHHcCCC
Q 007169 549 KLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFN---SALVAIVSVD------QDALKAWAASEGIQ 606 (615)
Q Consensus 549 kl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~~~ 606 (615)
|+ +|++|+|.+||++|.+||+|.||+|+|.+++ +.++|+|+++ ++++.++++++.++
T Consensus 406 k~-~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~ 471 (503)
T d3cw9a1 406 IS-GGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELA 471 (503)
T ss_dssp EE-TTEEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHSSSC
T ss_pred EE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 97 8999999999999999999999999997654 4799999984 57899999876664
No 8
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=73.99 E-value=4.9 Score=28.06 Aligned_cols=44 Identities=9% Similarity=0.210 Sum_probs=37.3
Q ss_pred hHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHH
Q 007169 558 AEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAAS 602 (615)
Q Consensus 558 p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~ 602 (615)
..++++.+.++|.|.+|.-+..+ .++++=+.+++-+++.+++.+
T Consensus 15 ~~~~~~~i~~~peV~e~~~vtG~-~D~il~v~~~d~~~l~~~i~~ 58 (77)
T d2cfxa2 15 YERFKSYIQTLPNIEFCYRIAGA-ACYMLKINAESLEAVEDFINK 58 (77)
T ss_dssp HHHHHHHHHTCTTEEEEEEEESS-SSEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCchheEEEEEcCC-CCEEEEEEECCHHHHHHHHhh
Confidence 57899999999999999876544 578888899999999999764
No 9
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=71.23 E-value=8.4 Score=39.26 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=68.5
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhcc---CcccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATL---GTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ- 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~- 329 (615)
.+|.+|+|. .+-.+|. .-.+|.+.+...+..+.. ..++.++|++..++|...-+ ....++++..|+..+...
T Consensus 85 ~~d~~Ali~-~~~~~~~--~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~-iv~~lA~~~~Gav~v~l~~ 160 (643)
T d1pg4a_ 85 NGDRTAIIW-EGDDTSQ--SKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEA-AVAMLACARIGAVHSVIFG 160 (643)
T ss_dssp HTTSEEEEE-ECSSTTC--EEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHH-HHHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEE-EecCCCC--ceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHH-HHHHHHHHHhCeEEEecCC
Confidence 467788654 4433443 346888888776655543 36889999999999976433 344667888899887765
Q ss_pred -CChHHHHHHHHhhCCeEEeech
Q 007169 330 -GDNMKLMDDMAALRPTVFCSVP 351 (615)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (615)
..+..+...++..++.+++...
T Consensus 161 ~~~~~~l~~~l~~~~~~~li~~~ 183 (643)
T d1pg4a_ 161 GFSPEAVAGCIIDSSSRLVITAD 183 (643)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCHHHHHHHHHhcCCCEEEEcc
Confidence 6889999999999999988754
No 10
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=70.26 E-value=4.2 Score=40.24 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=69.8
Q ss_pred EEeccCCCCCCcEEEecHHHHHHHHHhhccC---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CChHHH
Q 007169 261 ICYTSGTTGTPKGAVLSHGNLIASVAGATLG---TKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ--GDNMKL 335 (615)
Q Consensus 261 i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~--~~~~~l 335 (615)
+.++.+.++ ..+|++.+...+...... .++.++|++..+++-.-.+ ....++++..|+..+... .....+
T Consensus 37 ~a~~d~~~~----~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns~e~-~v~~lA~~~~G~i~vpl~~~~~~~~l 111 (541)
T d1lcia_ 37 IAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF-FMPVLGALFIGVAVAPANDIYNEREL 111 (541)
T ss_dssp EEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCSST-HHHHHHHHHHTCEEEECCTTCCHHHH
T ss_pred EEEEeCCCC----eEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHH-HHHHHHHHHhCeEEEecCCCCCHHHH
Confidence 334555444 458999987776655433 5789999998888765322 334567788998888765 678899
Q ss_pred HHHHHhhCCeEEeechHHHHHHHHH
Q 007169 336 MDDMAALRPTVFCSVPRLYNRIYAG 360 (615)
Q Consensus 336 ~~~i~~~~~t~~~~~P~~~~~l~~~ 360 (615)
...++..++++++.....+..+.+.
T Consensus 112 ~~~l~~~~~~~vi~~~~~~~~~~~~ 136 (541)
T d1lcia_ 112 LNSMNISQPTVVFVSKKGLQKILNV 136 (541)
T ss_dssp HHHHHHHCCSEEEECGGGHHHHHHH
T ss_pred HHHHHhccceEEeeeccccccchhc
Confidence 9999999999999999887776553
No 11
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=65.88 E-value=16 Score=35.36 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=71.0
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhcc---CcccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATL---GTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ- 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~- 329 (615)
.||.+|++.- +-.+|.+.+...+..... ..++.++|++..++|-...+ ....+.++..|+..+...
T Consensus 36 ~Pd~~Al~~~---------~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~~~-v~~~la~~~~G~v~v~l~~ 105 (514)
T d1amua_ 36 RPNNVAIVCE---------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDL-FIGILAVLKAGGAYVPIDI 105 (514)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEEC---------CeeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHH-HHHHHHHHHhCcEEEEeCC
Confidence 4778887641 135899988777665543 36889999999998876533 334567788998888766
Q ss_pred -CChHHHHHHHHhhCCeEEeechHHHHHHH
Q 007169 330 -GDNMKLMDDMAALRPTVFCSVPRLYNRIY 358 (615)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (615)
.....+...++..+++.++..+.....+.
T Consensus 106 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 135 (514)
T d1amua_ 106 EYPKERIQYILDDSQARMLLTQKHLVHLIH 135 (514)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHHT
T ss_pred CCCHHHHHHHHhccCCcEEEEehhhhhhhh
Confidence 67888999999999999999887665543
No 12
>d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]}
Probab=62.30 E-value=9.2 Score=36.39 Aligned_cols=50 Identities=6% Similarity=-0.107 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEEcCCC-HhHHHHHH-HHHhcCCeEEec
Q 007169 119 AGTARTEVGSGLIYH--GISKGSCIGLYFVNR-PEWLIVDH-ACSAYSFISVPL 168 (615)
Q Consensus 119 l~~~~~~la~~L~~~--Gv~~gd~V~i~~~n~-~e~~~~~l-A~~~~G~v~vpl 168 (615)
+.++.+++|..|.+. +++||+.|.|.++.. .+++.++. ++.++|+-+|.+
T Consensus 2 ~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v 55 (406)
T d2ayia1 2 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV 55 (406)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHHHHHHHcccCCCCCEEEEEcccchHHHHHHHHHHHHHcCCCeEEE
Confidence 346788999999876 679999999988764 55555444 788999977654
No 13
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=61.04 E-value=29 Score=33.57 Aligned_cols=99 Identities=6% Similarity=-0.160 Sum_probs=72.2
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhcc---CcccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATL---GTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ- 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~- 329 (615)
.||.+|++...+|. .-.+|.+.+...+..... ..++.++|++..+++-...+ ....++++..|+..+...
T Consensus 24 ~pd~~av~~~~~g~-----~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~ 97 (534)
T d1v25a_ 24 FGRKEVVSRLHTGE-----VHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRH-LEAYFAVPGMGAVLHTANP 97 (534)
T ss_dssp STTCEEEEECTTSC-----EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred cCCCeEEEEecCCc-----eEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCCHHH-HHHHHHHHHhCcEEEecCC
Confidence 46778866655542 235898888777655443 36789999999988865432 334567888998888776
Q ss_pred -CChHHHHHHHHhhCCeEEeechHHHHHHH
Q 007169 330 -GDNMKLMDDMAALRPTVFCSVPRLYNRIY 358 (615)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (615)
.....+...++..++..++........+.
T Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (534)
T d1v25a_ 98 RLSPKEIAYILNHAEDKVLLFDPNLLPLVE 127 (534)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHHH
T ss_pred CCCHHHHHHHHHhhccccccccchhhhhHH
Confidence 57888999999999999998877666543
No 14
>d2cyya2 d.58.4.2 (A:65-150) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=60.09 E-value=11 Score=26.59 Aligned_cols=43 Identities=12% Similarity=0.162 Sum_probs=34.8
Q ss_pred hHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHH
Q 007169 558 AEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAA 601 (615)
Q Consensus 558 p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~ 601 (615)
.+++++.+.++|.|.+|..+.-+ -+.++=+++++.+++.++..
T Consensus 16 ~~~v~~~l~~~peV~~~~~~tG~-~D~~~~v~~~~~~~l~~~~~ 58 (86)
T d2cyya2 16 YSEVASNLAKYPEIVEVYETTGD-YDMVVKIRTKNSEELNNFLD 58 (86)
T ss_dssp HHHHHHHHHTCTTEEEEEECSSS-SSEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEEEcCC-CCEEEEEEECCHHHHHHHHH
Confidence 45789999999999999877554 46777778889999988874
No 15
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=59.86 E-value=17 Score=34.72 Aligned_cols=91 Identities=15% Similarity=0.080 Sum_probs=65.2
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhcc---CcccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATL---GTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ- 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~- 329 (615)
.||.+|++.-.+|. -+|.+.+...+..... ..++.++|++..++|-... .....++++..|+..+..+
T Consensus 15 ~pd~~al~~~~~~~-------~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~v~vpi~~ 86 (503)
T d3cw9a1 15 APDHCALAVPARGL-------RLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSAD-VVIAILALHRLGAVPALLNP 86 (503)
T ss_dssp STTSEEEEEGGGTE-------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHH-HHHHHHHHHHHTCEEEEECT
T ss_pred CCCCeEEEECCCCc-------EEeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHH-HHHHHHHHHHhCcEEEEeCC
Confidence 46778876644442 4888888766555443 3578999999888885432 2334567888999888776
Q ss_pred -CChHHHHHHHHhhCCeEEeechH
Q 007169 330 -GDNMKLMDDMAALRPTVFCSVPR 352 (615)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~ 352 (615)
..+..+...+++.++..++....
T Consensus 87 ~~~~~~i~~~l~~~~~~~~i~~~~ 110 (503)
T d3cw9a1 87 RLKSAELAELIKRGEMTAAVIAVG 110 (503)
T ss_dssp TSCHHHHHHHHHHTTCSEEEESSC
T ss_pred CCCHHHHHHHHHhcCCcEEEeecc
Confidence 57888889999999999876653
No 16
>d2cg4a2 d.58.4.2 (A:67-152) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=59.62 E-value=12 Score=26.47 Aligned_cols=45 Identities=11% Similarity=0.060 Sum_probs=37.3
Q ss_pred hHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHHc
Q 007169 558 AEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASE 603 (615)
Q Consensus 558 p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (615)
..++.+.+.++|.|.+|..+.-+ -+.++=+.+.+.+++.++..++
T Consensus 16 ~~~~~~~l~~~peV~~~~~vtG~-~D~i~~v~~~d~~~l~~~i~~~ 60 (86)
T d2cg4a2 16 YPSALAKLESLDEVTEAYYTTGH-YSIFIKVMCRSIDALQHVLINK 60 (86)
T ss_dssp HHHHHHHHHTCTTEEEEEEESSS-CSEEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCC-ceEEEEEEECCHHHHHHHHHHH
Confidence 46788999999999999887554 5678888889999999998764
No 17
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=59.39 E-value=23 Score=35.57 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=67.6
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhc----cCcccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGAT----LGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~----~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~ 329 (615)
.||.+|+|.. +..+|. +..+|.+.+...+..+. ...++.++|++..++|-.-- .....++++..|+..+...
T Consensus 72 ~pd~~Ali~~-~~~~g~--~~~~Ty~eL~~~v~~~A~~L~~~~Gv~~Gd~V~i~~~n~~e-~~~~~lA~~~~Gav~vpi~ 147 (640)
T d1ry2a_ 72 TPNKKAIIFE-GDEPGQ--GYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPE-AIITLLAISRIGAIHSVVF 147 (640)
T ss_dssp CTTSEEEEEE-CSSTTC--CEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHH-HHHHHHHHHHTTCEEEECC
T ss_pred CCCCEEEEEE-ecCCCC--eeEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHH-HHHHHHHhccCceEeecCC
Confidence 5788887644 434443 35688888876654433 24688999999999886432 2334566788898887765
Q ss_pred --CChHHHHHHHHhhCCeEEeechH
Q 007169 330 --GDNMKLMDDMAALRPTVFCSVPR 352 (615)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~ 352 (615)
..+..+...++..++..++....
T Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (640)
T d1ry2a_ 148 AGFSSNSLRDRINDGDSKVVITTDE 172 (640)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCHHHHHHHHHhhhccccccchh
Confidence 67888999999999999887653
No 18
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=51.63 E-value=37 Score=25.01 Aligned_cols=66 Identities=12% Similarity=0.024 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHH
Q 007169 83 DNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVD 155 (615)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 155 (615)
.++++..+..|+...+... |...-+|-..|-.|+.+++.++...|.+.+++ ..|+.-|+...++..
T Consensus 14 tVl~~l~~~lP~~~~iY~~---D~a~~PYG~ks~~~I~~~~~~~~~~l~~~~~~----~iViACNTaS~~al~ 79 (105)
T d1b74a1 14 TVLKAIRNRYRKVDIVYLG---DTARVPYGIRSKDTIIRYSLECAGFLKDKGVD----IIVVACNTASAYALE 79 (105)
T ss_dssp HHHHHHHHHSSSCEEEEEE---CGGGCCGGGSCHHHHHHHHHHHHHHHHTTTCS----EEEECCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC----EEEEecCcHHHHHHH
Confidence 3456667789999988776 66666677789999999999999999988764 555565665544433
No 19
>d1i1ga2 d.58.4.2 (A:62-141) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=49.62 E-value=9.4 Score=26.58 Aligned_cols=44 Identities=11% Similarity=0.222 Sum_probs=34.0
Q ss_pred HHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHHc
Q 007169 559 EKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASE 603 (615)
Q Consensus 559 ~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (615)
.++.+.|.++|.|.+|..+..+ -+.++-+.+.+.+++.++..++
T Consensus 17 ~~v~~~l~~~peV~~~~~vtG~-~D~~~~v~~~d~~~l~~~l~~~ 60 (80)
T d1i1ga2 17 FEVAEKLKEYDFVKELYLSSGD-HMIMAVIWAKDGEDLAEIISNK 60 (80)
T ss_dssp HHHHHHHHHSTTEEEECCCSSS-SSEEEEEEESSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEeEEEEECCC-CCEEEEEEECCHHHHHHHHHhh
Confidence 4566677889999998765443 4678888889999999998764
No 20
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.01 E-value=40 Score=27.00 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=38.8
Q ss_pred HHHc-CCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEE
Q 007169 130 LIYH-GISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFC 191 (615)
Q Consensus 130 L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~ 191 (615)
|.+. ++++|++|.|....+.-=..+...+...|+.++.+.. +++.+ ..+.+.++..+|-
T Consensus 20 l~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~--~~~~~-~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 20 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG--TEEGQ-KIVLQNGAHEVFN 79 (174)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHTTCSEEEE
T ss_pred HHHHhCCCCCCEEEEEeccccccccccccccccCcccccccc--ccccc-ccccccCcccccc
Confidence 3444 7999999999997665544554555778887766653 34444 4555677777664
No 21
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}
Probab=48.56 E-value=19 Score=29.14 Aligned_cols=62 Identities=6% Similarity=-0.045 Sum_probs=41.4
Q ss_pred HHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 129 GLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 129 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
.|.+.++++||+|.|....+.-=..+...+...|+.++.+..+ ++.+ ..+++.+++.++...
T Consensus 19 al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~--~~~~-~~~~~lGa~~~i~~~ 80 (171)
T d1iz0a2 19 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR--PEKL-ALPLALGAEEAATYA 80 (171)
T ss_dssp HHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS--GGGS-HHHHHTTCSEEEEGG
T ss_pred HHHHhCCCCCCEEEEEeccccchhhhhhhhccccccccccccc--cccc-ccccccccceeeehh
Confidence 4566689999999999977765455555566789876665433 3333 345567887777543
No 22
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.47 E-value=55 Score=25.98 Aligned_cols=62 Identities=10% Similarity=-0.042 Sum_probs=40.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC-eEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSF-ISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
+++.+.++++||.|+|+..-..-...+++|. ..|+ .++.++.. ++.+. +.++.++..++...
T Consensus 17 ~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~-~~G~~~Vi~~d~~--~~rl~-~a~~~Ga~~~~~~~ 79 (171)
T d1pl8a2 17 HACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDLS--ATRLS-KAKEIGADLVLQIS 79 (171)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEESC--HHHHH-HHHHTTCSEEEECS
T ss_pred HHHHHhCCCCCCEEEEECCCccHHHHHHHHH-HcCCceEEeccCC--HHHHH-HHHHhCCccccccc
Confidence 4556679999999999987666666666665 5677 45544433 44444 45677777766644
No 23
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=44.69 E-value=42 Score=32.15 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=64.0
Q ss_pred CCCCeEEEEeccCCCCCCcEEEecHHHHHHHHHhhccC---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 007169 254 KPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLG---TKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQ- 329 (615)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~- 329 (615)
.||.+|++. +. -.+|.+.+...+..+... .++.++|++..++|-.-. .....++++..|+..+...
T Consensus 38 ~pd~~Al~~---~~------~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~-~~v~~lA~~~~G~i~vpl~~ 107 (536)
T d1mdba_ 38 YGDRIAITC---GN------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKE-FFEVIFALFRLGALPVFALP 107 (536)
T ss_dssp HTTSEEEEE---TT------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHH-HHHHHHHHHHHTCEEEECCT
T ss_pred CCCCeEEEE---CC------EeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHH-HHHHHHHHHHhCcEEEecCC
Confidence 467777654 21 258999887776655433 578999999998886532 2344667899999888776
Q ss_pred -CChHHHHHHHHhhCCeEEeech
Q 007169 330 -GDNMKLMDDMAALRPTVFCSVP 351 (615)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (615)
.....+...++..++..++...
T Consensus 108 ~~~~~~~~~~l~~~~~~~~~~~~ 130 (536)
T d1mdba_ 108 SHRSSEITYFCEFAEAAAYIIPD 130 (536)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEES
T ss_pred CCCHHHHHHHHHhhccceEeccc
Confidence 6778888899999999887654
No 24
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=43.21 E-value=37 Score=28.01 Aligned_cols=60 Identities=10% Similarity=-0.047 Sum_probs=38.0
Q ss_pred HHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEE
Q 007169 129 GLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFC 191 (615)
Q Consensus 129 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~ 191 (615)
++...++++||.|+|+..-..-.+++.+|...-+..++..+.. ++. ....++.++..++.
T Consensus 17 a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~--~~r-l~~a~~~Ga~~~~~ 76 (195)
T d1kola2 17 GAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN--PAR-LAHAKAQGFEIADL 76 (195)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC--HHH-HHHHHHTTCEEEET
T ss_pred HHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeeccc--chh-hHhhhhccccEEEe
Confidence 3556699999999999765556666666654443355555443 333 34556667777664
No 25
>d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]}
Probab=42.65 E-value=27 Score=33.03 Aligned_cols=50 Identities=6% Similarity=-0.149 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEEcCC-CHhHHHHHH-HHHhcCCeEEec
Q 007169 119 AGTARTEVGSGLIYH--GISKGSCIGLYFVN-RPEWLIVDH-ACSAYSFISVPL 168 (615)
Q Consensus 119 l~~~~~~la~~L~~~--Gv~~gd~V~i~~~n-~~e~~~~~l-A~~~~G~v~vpl 168 (615)
+.++.+++|.-|.+. +++||+.|.|.++- ..+++-++. ++..+|+-+|.+
T Consensus 2 f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v 55 (413)
T d1zjca1 2 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV 55 (413)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEEecCchHHHHHHHHHHHHHcCCceEEE
Confidence 567889999999876 57999988887765 455555554 678999976644
No 26
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.41 E-value=54 Score=25.81 Aligned_cols=60 Identities=8% Similarity=0.051 Sum_probs=40.1
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEE
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFC 191 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~ 191 (615)
++|++.++++||+|.|+..-..-.+.+. .+-..|+.++.++. .++.+ ...++.++..++.
T Consensus 18 ~al~~~~~~~g~~VlV~GaG~vG~~~~~-~ak~~G~~Vi~~~~--~~~~~-~~a~~~Ga~~~i~ 77 (166)
T d1llua2 18 KGLKQTNARPGQWVAISGIGGLGHVAVQ-YARAMGLHVAAIDI--DDAKL-ELARKLGASLTVN 77 (166)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTCEEEEEES--CHHHH-HHHHHTTCSEEEE
T ss_pred HHHHHhCCCCCCEEEEeeccccHHHHHH-HHHHcCCccceecc--hhhHH-HhhhccCcccccc
Confidence 4567778999999999987555555554 44566877666643 34444 3456677777664
No 27
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=42.30 E-value=15 Score=28.65 Aligned_cols=47 Identities=17% Similarity=0.074 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC
Q 007169 124 TEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYD 170 (615)
Q Consensus 124 ~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 170 (615)
..+...|.+.|+.+.+.|.++|..+.....+.+++..+|.--|-+++
T Consensus 74 ~~l~~~~~~~gi~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~yd 120 (136)
T d1e0ca2 74 TDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYA 120 (136)
T ss_dssp TTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECS
T ss_pred HHHhhhhhhcccCCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEec
Confidence 34566677889999999999999988888888999999987565554
No 28
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}
Probab=42.22 E-value=31 Score=27.65 Aligned_cols=58 Identities=12% Similarity=-0.037 Sum_probs=41.4
Q ss_pred HcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEc
Q 007169 132 YHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 132 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~ 192 (615)
..++++||.|+|+.....-...+.+++...+..++.++.. ++. ..+.++.++..+|-.
T Consensus 23 ~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~--~~r-l~~a~~~GAd~~in~ 80 (175)
T d1cdoa2 23 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN--PDK-FEKAKVFGATDFVNP 80 (175)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC--GGG-HHHHHHTTCCEEECG
T ss_pred hhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecch--HHH-HHHHHHcCCcEEEcC
Confidence 4589999999999988778888888777666666666543 333 345566778777743
No 29
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=42.16 E-value=44 Score=26.49 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=38.1
Q ss_pred HHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEc
Q 007169 129 GLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 129 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~ 192 (615)
++.+.++++||+|+|+..-..-.+.+ ..+...|+-++.++.. ++.+ .+.++.++...+..
T Consensus 18 a~~~~~~~~g~~vlV~G~G~vG~~~~-~~ak~~Ga~vi~v~~~--~~r~-~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 18 ACRRAGVQLGTTVLVIGAGPIGLVSV-LAAKAYGAFVVCTARS--PRRL-EVAKNCGADVTLVV 77 (170)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESC--HHHH-HHHHHTTCSEEEEC
T ss_pred HHHHhCCCCCCEEEEEcccccchhhH-hhHhhhcccccccchH--HHHH-HHHHHcCCcEEEec
Confidence 35566999999999997544555544 4446778877666543 4443 44455666665543
No 30
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=41.74 E-value=48 Score=26.86 Aligned_cols=77 Identities=9% Similarity=0.078 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHH---HhccceEEEEcccchHHHHhhhccCCCceEE
Q 007169 136 SKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIV---NHASVQAVFCVPQTLNSLLSCLSEVPTVRLI 212 (615)
Q Consensus 136 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il---~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~i 212 (615)
++|.++.|++.+--..-...-.....|..+..+.-.++.++-..++ ..-+..++++..-...-+ +.|.+..+
T Consensus 29 ~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~Gi-----Dip~V~~V 103 (174)
T d1c4oa2 29 ARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGL-----DIPEVSLV 103 (174)
T ss_dssp HTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTTC-----CCTTEEEE
T ss_pred hcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeeec-----cCCCCcEE
Confidence 4688999999987555555555667899999999999877665555 455678888766443322 67889988
Q ss_pred EEECC
Q 007169 213 VVIGG 217 (615)
Q Consensus 213 i~~~~ 217 (615)
+.++.
T Consensus 104 i~~~~ 108 (174)
T d1c4oa2 104 AILDA 108 (174)
T ss_dssp EETTT
T ss_pred EEecc
Confidence 88775
No 31
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=40.67 E-value=33 Score=27.38 Aligned_cols=62 Identities=13% Similarity=0.012 Sum_probs=42.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
+.|++.++++||+|+|+..-..-.+.+.+|- ..|+-.+.+... .+.+ ..++..++..++...
T Consensus 21 ~al~~~~~~~G~~VlI~GaG~vG~~a~qlak-~~Ga~~i~~~~~--~~~~-~~a~~lGad~~i~~~ 82 (168)
T d1uufa2 21 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTS--EAKR-EAAKALGADEVVNSR 82 (168)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS--GGGH-HHHHHHTCSEEEETT
T ss_pred HHHHHhCCCCCCEEEEeccchHHHHHHHHhh-cccccchhhccc--hhHH-HHHhccCCcEEEECc
Confidence 4567779999999999987556666666665 568877765543 2333 355667777766443
No 32
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.56 E-value=84 Score=24.86 Aligned_cols=90 Identities=3% Similarity=0.018 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHH---HHhccceEEEEcccchH
Q 007169 121 TARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYI---VNHASVQAVFCVPQTLN 197 (615)
Q Consensus 121 ~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~i---l~~~~~~~vi~~~~~~~ 197 (615)
++...+...|.+. ++.++.|++......-.+.......|..+..++..++.++...+ +...+.++++|.+....
T Consensus 18 ~K~~~L~~ll~~~---~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~~~~ 94 (171)
T d1s2ma2 18 QKLHCLNTLFSKL---QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTR 94 (171)
T ss_dssp GHHHHHHHHHHHS---CCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSCSSS
T ss_pred HHHHHHHHHHHhC---CCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhcccCccccccchhHhhh
Confidence 4556666666664 45688888866533333333444568888889988887655544 45667889988775432
Q ss_pred HHHhhhccCCCceEEEEECCC
Q 007169 198 SLLSCLSEVPTVRLIVVIGGI 218 (615)
Q Consensus 198 ~l~~~~~~~~~l~~ii~~~~~ 218 (615)
- -+++.+..+|.++..
T Consensus 95 G-----id~~~v~~VI~~d~p 110 (171)
T d1s2ma2 95 G-----IDIQAVNVVINFDFP 110 (171)
T ss_dssp S-----CCCTTEEEEEESSCC
T ss_pred c-----cccceeEEEEecCCc
Confidence 2 256788888887653
No 33
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.18 E-value=37 Score=27.07 Aligned_cols=63 Identities=10% Similarity=-0.003 Sum_probs=41.9
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEccc
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQ 194 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 194 (615)
+.|++.++++||+|+|+..-..-.+.+.+|- ..|+-++.++.+ ++.+. ..++.++..++...+
T Consensus 18 ~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak-~~G~~vi~~~~~--~~k~~-~a~~lGa~~~i~~~~ 80 (168)
T d1piwa2 18 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISRS--SRKRE-DAMKMGADHYIATLE 80 (168)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESS--STTHH-HHHHHTCSEEEEGGG
T ss_pred HHHHHhCcCCCCEEEEECCCCcchhHHHHhh-hccccccccccc--hhHHH-HhhccCCcEEeeccc
Confidence 4567779999999999987556666555554 578877666554 33333 345667777665443
No 34
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=36.05 E-value=51 Score=26.12 Aligned_cols=62 Identities=6% Similarity=-0.124 Sum_probs=38.4
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC-eEEecCCCCCHHHHHHHHHhccceEEEEc
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSF-ISVPLYDTLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-v~vpl~~~~~~~~l~~il~~~~~~~vi~~ 192 (615)
+.|++.++++||.|+|+...+.--..+...+...|. .++..... + +-..++++.+++.++..
T Consensus 18 ~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~--~-~~~~~~~~~Ga~~~i~~ 80 (170)
T d1jvba2 18 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR--E-EAVEAAKRAGADYVINA 80 (170)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS--H-HHHHHHHHHTCSEEEET
T ss_pred HHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccc--h-hhHHHHHHcCCceeecc
Confidence 346677899999999999766554444444445675 44444432 3 33455566777766643
No 35
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=35.59 E-value=20 Score=28.02 Aligned_cols=46 Identities=20% Similarity=0.055 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHh-cCCeEEecCC
Q 007169 125 EVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSA-YSFISVPLYD 170 (615)
Q Consensus 125 ~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~-~G~v~vpl~~ 170 (615)
.+...+..+|+.+++.|.++|..+.....+.+++.. +|..-|-+++
T Consensus 76 ~~~~~~~~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~yd 122 (141)
T d1uara2 76 ELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYD 122 (141)
T ss_dssp HHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEES
T ss_pred HHHHHHHHhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeC
Confidence 344445678999999999999988887788888764 7986565554
No 36
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=35.21 E-value=37 Score=27.11 Aligned_cols=59 Identities=7% Similarity=-0.077 Sum_probs=37.9
Q ss_pred HcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 132 YHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 132 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
..++++||+|+|+.....-...+.+|...-...++..... ++. ..+.++.++..+|-..
T Consensus 23 ~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~--~~k-~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 23 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN--KDK-FARAKEFGATECINPQ 81 (176)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC--GGG-HHHHHHHTCSEEECGG
T ss_pred hhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEccc--HHH-HHHHHHhCCcEEEeCC
Confidence 3479999999999887776666666655433455544332 222 4456677777777543
No 37
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.10 E-value=62 Score=25.34 Aligned_cols=62 Identities=15% Similarity=0.228 Sum_probs=41.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 128 SGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 128 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
+.|...++++||+|+|...-+.-.+++ ..+...|+.++.+. .+++.+. .+++.++..++...
T Consensus 18 ~al~~~~~~~g~~vlv~G~G~iG~~a~-~~a~~~g~~v~~~~--~~~~r~~-~~k~~Ga~~~~~~~ 79 (168)
T d1rjwa2 18 KALKVTGAKPGEWVAIYGIGGLGHVAV-QYAKAMGLNVVAVD--IGDEKLE-LAKELGADLVVNPL 79 (168)
T ss_dssp HHHHHHTCCTTCEEEEECCSTTHHHHH-HHHHHTTCEEEEEC--SCHHHHH-HHHHTTCSEEECTT
T ss_pred HHHHHhCCCCCCEEEEeecccchhhhh-HHHhcCCCeEeccC--CCHHHhh-hhhhcCcceecccc
Confidence 346667899999999998866665554 44446777654443 3455544 55667888777644
No 38
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}
Probab=34.63 E-value=24 Score=32.42 Aligned_cols=64 Identities=13% Similarity=0.070 Sum_probs=44.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC-----CCCHHHHHHHHHhccceEEEEc
Q 007169 125 EVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYD-----TLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 125 ~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~-----~~~~~~l~~il~~~~~~~vi~~ 192 (615)
++...|..+++++||.|.+-...+. ....|+..+|+.++.++- ....+.+...++. +.++|+..
T Consensus 58 Al~~al~al~~~~gdeVi~~~~~~~---~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~-~tkaIi~~ 126 (376)
T d1mdoa_ 58 GMHIALMALGIGEGDEVITPSMTWV---STLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 126 (376)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCH---HHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred HHHHHHHHhCCCCCCEEEEeccccc---ccccchhccccceeeecccccccCCCHHHHHHhcCC-CCeEEEEe
Confidence 4445567789999999988765554 455667888998877643 2467888877754 45666653
No 39
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.38 E-value=24 Score=27.64 Aligned_cols=47 Identities=11% Similarity=-0.053 Sum_probs=37.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC
Q 007169 125 EVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDT 171 (615)
Q Consensus 125 ~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~ 171 (615)
.+...+.+.|+.+++.|.++|........+.+++-.+|.--|-+|+.
T Consensus 78 ~l~~~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdG 124 (144)
T d1rhsa2 78 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDG 124 (144)
T ss_dssp HHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESS
T ss_pred HHHHHHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCC
Confidence 33445677899999999999999888888889999999876666653
No 40
>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}
Probab=32.16 E-value=24 Score=32.62 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHhc-CCCceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHH
Q 007169 80 TTHDNFVRAVDTF-RDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHAC 158 (615)
Q Consensus 80 tl~~~l~~~a~~~-pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (615)
...+.|++..+++ ..+-|+.+. .| ..++-.+|+.+++++||.|.+-.- -|..+.-++
T Consensus 21 ~~~~~fE~~~~~~~~~~~~~~~~---Sg----------------T~Al~lal~~l~~~~gdeVi~p~~---t~~a~~~~~ 78 (374)
T d1o69a_ 21 EFVNRFEQSVKDYSKSENALALN---SA----------------TAALHLALRVAGVKQDDIVLASSF---TFIASVAPI 78 (374)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEES---CH----------------HHHHHHHHHHTTCCTTCEEEEESS---SCGGGTHHH
T ss_pred HHHHHHHHHHHHHHCcCeEEEeC---CH----------------HHHHHHHHHHcCCCCcCEEEeCCc---chHhhHHHH
Confidence 4456677766654 444444432 22 233445567789999999877443 445667788
Q ss_pred HhcCCeEEecCCC----CCHHHHHH--HHHhccceEEEEcc-----cchHHHHhhhc
Q 007169 159 SAYSFISVPLYDT----LGPDAVKY--IVNHASVQAVFCVP-----QTLNSLLSCLS 204 (615)
Q Consensus 159 ~~~G~v~vpl~~~----~~~~~l~~--il~~~~~~~vi~~~-----~~~~~l~~~~~ 204 (615)
..+|+.++.++.. ........ .....+.++++... ...+.+.+...
T Consensus 79 ~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~~G~~~d~~~i~~~~~ 135 (374)
T d1o69a_ 79 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICK 135 (374)
T ss_dssp HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHH
T ss_pred hhccceeEecccccccccccccccccchhcccccccccccccccchhhhHHHHHHhh
Confidence 9999999998754 22333333 23333455555542 23455555543
No 41
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
Probab=31.47 E-value=44 Score=26.74 Aligned_cols=58 Identities=5% Similarity=-0.070 Sum_probs=39.3
Q ss_pred HcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEc
Q 007169 132 YHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 132 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~ 192 (615)
..++++||.|+|+.....-...+.++...-+..++.++..... ..+..+.++..++..
T Consensus 23 ~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k---~~~a~~~Ga~~~i~~ 80 (176)
T d2jhfa2 23 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK---FAKAKEVGATECVNP 80 (176)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG---HHHHHHTTCSEEECG
T ss_pred hhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHH---HHHHHHhCCeeEEec
Confidence 3479999999999998887777777776666676666554322 234455566655543
No 42
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=29.84 E-value=86 Score=25.31 Aligned_cols=76 Identities=7% Similarity=0.017 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHH---HhccceEEEEcccchHHHHhhhccCCCceEEE
Q 007169 137 KGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIV---NHASVQAVFCVPQTLNSLLSCLSEVPTVRLIV 213 (615)
Q Consensus 137 ~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il---~~~~~~~vi~~~~~~~~l~~~~~~~~~l~~ii 213 (615)
++.++.+++.+....-.+.--+...|..+..++-.++.++-..++ ..-+..++++..-...- -+.|.+..||
T Consensus 30 ~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~rG-----iDip~v~~VI 104 (181)
T d1t5la2 30 RNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREG-----LDIPEVSLVA 104 (181)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCSSS-----CCCTTEEEEE
T ss_pred cCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHHcc-----CCCCCCCEEE
Confidence 466788888776544444444567899999999999987766555 45578899987644322 2678898888
Q ss_pred EECC
Q 007169 214 VIGG 217 (615)
Q Consensus 214 ~~~~ 217 (615)
.++.
T Consensus 105 ~~d~ 108 (181)
T d1t5la2 105 ILDA 108 (181)
T ss_dssp ETTT
T ss_pred EecC
Confidence 8765
No 43
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=28.46 E-value=25 Score=26.18 Aligned_cols=45 Identities=20% Similarity=0.104 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC
Q 007169 125 EVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLY 169 (615)
Q Consensus 125 ~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 169 (615)
.+...+...|+.+.+.|.++|..+.....+.+++-.+|..-|-++
T Consensus 69 ~~~~~~~~~g~~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y 113 (120)
T d1urha2 69 ELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLY 113 (120)
T ss_dssp HHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEE
T ss_pred HhhhhhhhcccCccCceEEEccchhHHHHHHHHHHHcCCCCceEc
Confidence 445667778999999999999999999999999999998644444
No 44
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=27.75 E-value=66 Score=21.33 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=34.3
Q ss_pred hHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEe---CHHHHHHHHHHcCCCCC
Q 007169 558 AEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSV---DQDALKAWAASEGIQVT 608 (615)
Q Consensus 558 p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~---~~~~l~~~~~~~~~~~~ 608 (615)
...||+.|.+.|+|.++-|- ...+.+..-..+ +.+++.+..++.|.++.
T Consensus 18 ~~~Ie~~l~~~~gV~~v~v~--~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~ 69 (72)
T d1osda_ 18 PITVKKAISKVEGVSKVDVT--FETRQAVVTFDDAKTSVQKLTKATADAGYPSS 69 (72)
T ss_dssp HHHHHHHHHTSTTEEEEEEE--TTTTEEEEEEETTTCCHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHcCCCcEEEEEE--cCCCEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence 46799999999999998873 223333333334 45888888888887643
No 45
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.68 E-value=19 Score=24.91 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEE
Q 007169 122 ARTEVGSGLIYHGISKGSCIGLY 144 (615)
Q Consensus 122 ~~~~la~~L~~~Gv~~gd~V~i~ 144 (615)
+...+-..|+++|+++||.|-|.
T Consensus 44 ~~~Gv~~~L~~~Gak~GD~V~Ig 66 (76)
T d1udxa3 44 RRQGVEAALRAKGVRAGDLVRIG 66 (76)
T ss_dssp HHTTHHHHHHTTTCCTTCEEEET
T ss_pred HHCChHHHHHHcCCCCCCEEEEC
Confidence 44556778899999999998773
No 46
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=27.45 E-value=1.4e+02 Score=23.62 Aligned_cols=62 Identities=13% Similarity=0.091 Sum_probs=42.8
Q ss_pred HHHHc-CCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 129 GLIYH-GISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 129 ~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
.|.+. .+++||+|.|....+---..+..-+-..|+.++.+.. +++ -...+++.++..+|...
T Consensus 20 al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~--~~~-~~~~~~~~Ga~~vi~~~ 82 (182)
T d1v3va2 20 GLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG--SDE-KIAYLKQIGFDAAFNYK 82 (182)
T ss_dssp HHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHH-HHHHHHHTTCSEEEETT
T ss_pred HHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC--CHH-HHHHHHhhhhhhhcccc
Confidence 34433 7899999999999986555555666677887766542 233 45667777888877643
No 47
>d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]}
Probab=26.32 E-value=18 Score=29.92 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=30.6
Q ss_pred eeecccEEEEecCCcEEEEccCCCeEEcCCeeeechHHHHHHHh
Q 007169 523 WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYA 566 (615)
Q Consensus 523 w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~~IE~~l~ 566 (615)
-..|-....+|++|.+.+.||.+|.-. +...+.-.+++++|.
T Consensus 113 v~~~P~~~liD~~G~i~y~G~idd~~~--~~~~~~~~~L~~Ai~ 154 (187)
T d2cvba1 113 ALRTPEVFLFDERRLLRYHGRVNDNPK--DPSKVQSHDLEAAIE 154 (187)
T ss_dssp CCEESEEEEECTTCBEEEEECSSSCTT--CGGGCCCCHHHHHHH
T ss_pred ccceeeEEEEcCCCeEEEEeeecCCCC--CCCCCCHHHHHHHHH
Confidence 356788889999999999999999743 334455455666553
No 48
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=25.15 E-value=38 Score=26.49 Aligned_cols=42 Identities=5% Similarity=-0.084 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCe
Q 007169 123 RTEVGSGLIYHGISKGSCIGLYFVNRPEW-LIVDHACSAYSFI 164 (615)
Q Consensus 123 ~~~la~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v 164 (615)
...+...|.++|+.+++.|.+++.++..+ .-+.+..-.+|..
T Consensus 70 ~~~~~~~l~~~Gi~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~ 112 (147)
T d1urha1 70 PETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVE 112 (147)
T ss_dssp HHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHhCcCCCCeEEEEeCCCcccchhHHHHHHhhccc
Confidence 45667778899999999999998764332 3355555666654
No 49
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}
Probab=24.69 E-value=1.3e+02 Score=26.01 Aligned_cols=66 Identities=5% Similarity=-0.068 Sum_probs=46.0
Q ss_pred HHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcccc
Q 007169 130 LIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQT 195 (615)
Q Consensus 130 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~ 195 (615)
+.+.|........+....+---..+-++|.++|.-++.+-|...++.....++..+++++++....
T Consensus 51 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~ 116 (292)
T d2bhsa1 51 AEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQ 116 (292)
T ss_dssp HHHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeeccc
Confidence 444454333445555566667777788899999877766666556666678899999999987543
No 50
>d2q4qa1 c.103.1.1 (A:2-122) Hypothetical protein PTD015 (C11orf67) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.65 E-value=86 Score=23.50 Aligned_cols=44 Identities=18% Similarity=0.241 Sum_probs=31.6
Q ss_pred eechHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHHcCCC
Q 007169 555 YIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQ 606 (615)
Q Consensus 555 ~v~p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~~~ 606 (615)
.+.+++++.++..-| |++++|-..... .+-+++++++++++|+.
T Consensus 47 ~l~~~~l~~~l~~~p---eilliGtG~~~~-----~~l~~~~~~~l~~~gi~ 90 (121)
T d2q4qa1 47 GVQPADVKEVVEKGV---QTLVIGRGMSEA-----LKVPSSTVEYLKKHGID 90 (121)
T ss_dssp CSCHHHHHHHHTTCC---SEEEEECCSSCC-----SCCCHHHHHHHHTTTCE
T ss_pred ccCHHHHHHHhccCC---CEEEEcCCCCcc-----cCCCHHHHHHHHHcCCc
Confidence 377899999997654 668998763321 23457788899999886
No 51
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=24.47 E-value=1.5e+02 Score=23.08 Aligned_cols=57 Identities=9% Similarity=0.003 Sum_probs=37.5
Q ss_pred CCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhccceEEEEcc
Q 007169 134 GISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 134 Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
.+++||.|.|...-..-.+.+.+|...-+..++..+.. ++ -...+++.++..++...
T Consensus 29 ~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~--~~-k~~~~~~~ga~~~i~~~ 85 (172)
T d1h2ba2 29 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK--EE-KLKLAERLGADHVVDAR 85 (172)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESS--HH-HHHHHHHTTCSEEEETT
T ss_pred ccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccch--hH-HHHHHhhcccceeecCc
Confidence 47999999999987777777777765544555554433 33 34455667777666544
No 52
>d2fi9a1 c.103.1.1 (A:11-128) Hypothetical outer membrane protein BH05650 {Bartonella henselae [TaxId: 38323]}
Probab=24.41 E-value=49 Score=24.72 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=29.8
Q ss_pred eeechHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHHcCCC
Q 007169 554 EYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQ 606 (615)
Q Consensus 554 ~~v~p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~~~ 606 (615)
..+.+++++.++...+. -|.+++|-..+.. .-+.++.++++++|+.
T Consensus 42 ~~~~~~~~~~~~~~~~~-peilliGtG~~~~------~~~~~~~~~l~~~gI~ 87 (118)
T d2fi9a1 42 PVPTQEDISRVLEESDQ-IEVLLIGTGVELL------RLPEELRVLLWEKRIS 87 (118)
T ss_dssp SSCCTGGGHHHHHTGGG-CSEEEEECTTSCC------CCCHHHHHHHHHTTCE
T ss_pred cccCHHHHHHHHhccCC-CCEEEEecCcccc------CCCHHHHHHHHHcCCe
Confidence 44556778888765443 3788998763321 1126788888889986
No 53
>d2fvta1 c.103.1.1 (A:1-127) Hypothetical protein RPA2829 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=24.12 E-value=46 Score=25.34 Aligned_cols=48 Identities=10% Similarity=0.167 Sum_probs=32.7
Q ss_pred CeeeechHHHHHHHhcCCCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHHHcCCC
Q 007169 552 QGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQ 606 (615)
Q Consensus 552 ~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~~~ 606 (615)
....+..+.++.++...|.+ |.+++|-..... .++ .++.++++++|+.
T Consensus 49 ~~~~l~~~~l~~l~~l~~~p-eilliGtG~~~~-----~~~-~~~~~~l~~~gI~ 96 (127)
T d2fvta1 49 KPEQIDRYSLQRVFDNANAI-DTLIVGTGADVW-----IAP-RQLREALRGVNVV 96 (127)
T ss_dssp STTCCCTTTTHHHHHTTTSC-SEEEEECTTSCC-----CCC-HHHHHHHHTTTCE
T ss_pred CcccCCHHHHHHHHhcCCCC-CEEEEecCCccC-----CCC-HHHHHHHHHCCCE
Confidence 34567778888777665643 788999774321 123 5788888999986
No 54
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.32 E-value=1.4e+02 Score=23.28 Aligned_cols=89 Identities=3% Similarity=-0.031 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHH---hccceEEEEcccchH
Q 007169 121 TARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVN---HASVQAVFCVPQTLN 197 (615)
Q Consensus 121 ~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~---~~~~~~vi~~~~~~~ 197 (615)
+..+.+..-|... .+.++.|++......-.+.--....|..+..++-.++.++...+++ ..+.+++++......
T Consensus 13 ~K~~~L~~ll~~~---~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~~~~ 89 (168)
T d1t5ia_ 13 EKNRKLFDLLDVL---EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGR 89 (168)
T ss_dssp GHHHHHHHHHHHS---CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSCCST
T ss_pred HHHHHHHHHHHhC---CCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhccccceeeeccccccc
Confidence 3444455555554 2446777776543322222234667888889999999887776665 445888888765332
Q ss_pred HHHhhhccCCCceEEEEECC
Q 007169 198 SLLSCLSEVPTVRLIVVIGG 217 (615)
Q Consensus 198 ~l~~~~~~~~~l~~ii~~~~ 217 (615)
-+ ++|.+..++.++.
T Consensus 90 Gi-----d~~~~~~vi~~~~ 104 (168)
T d1t5ia_ 90 GM-----DIERVNIAFNYDM 104 (168)
T ss_dssp TC-----CGGGCSEEEESSC
T ss_pred hh-----hcccchhhhhhhc
Confidence 22 4566777777664
No 55
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=23.29 E-value=66 Score=25.39 Aligned_cols=25 Identities=12% Similarity=-0.063 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcC
Q 007169 122 ARTEVGSGLIYHGISKGSCIGLYFV 146 (615)
Q Consensus 122 ~~~~la~~L~~~Gv~~gd~V~i~~~ 146 (615)
....++..|.++||.+++.|.+|..
T Consensus 73 ~~~~~~~~l~~lGI~~~~~VVvYd~ 97 (156)
T d1okga1 73 PCAEFIDWCMANGMAGELPVLCYDD 97 (156)
T ss_dssp CHHHHHHHHHHTTCSSSSCEEEECS
T ss_pred CHHHHHHHHHhccccCCceEEEEeC
Confidence 3567788899999999999999963
No 56
>d2nyga1 c.140.1.2 (A:2-271) Uncharacterized protein YokD {Bacillus subtilis [TaxId: 1423]}
Probab=22.56 E-value=26 Score=30.87 Aligned_cols=22 Identities=18% Similarity=0.187 Sum_probs=19.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcC
Q 007169 125 EVGSGLIYHGISKGSCIGLYFV 146 (615)
Q Consensus 125 ~la~~L~~~Gv~~gd~V~i~~~ 146 (615)
++...|.++||++||.|.|.+.
T Consensus 16 ~l~~~L~~LGi~kgd~v~vHss 37 (270)
T d2nyga1 16 SITEDLKALGLKKGMTVLVHSS 37 (270)
T ss_dssp HHHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCcCEEEEEcC
Confidence 4566799999999999999986
No 57
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=21.80 E-value=1.1e+02 Score=24.33 Aligned_cols=61 Identities=7% Similarity=-0.052 Sum_probs=39.1
Q ss_pred HHHHHc-CCCCCCEEEEEcCCCHhHHHHHHHHHhcCC-eEEecCCCCCHHHHHHHHHhccceEEEEc
Q 007169 128 SGLIYH-GISKGSCIGLYFVNRPEWLIVDHACSAYSF-ISVPLYDTLGPDAVKYIVNHASVQAVFCV 192 (615)
Q Consensus 128 ~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-v~vpl~~~~~~~~l~~il~~~~~~~vi~~ 192 (615)
++|.+. .+++||+|.|+.....-.+++.+|- ..|+ .++.++. .++.+ .++++.++..++..
T Consensus 18 ~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~ 80 (182)
T d1vj0a2 18 HAFDEYPESFAGKTVVIQGAGPLGLFGVVIAR-SLGAENVIVIAG--SPNRL-KLAEEIGADLTLNR 80 (182)
T ss_dssp HHHHTCSSCCBTCEEEEECCSHHHHHHHHHHH-HTTBSEEEEEES--CHHHH-HHHHHTTCSEEEET
T ss_pred HHHHHHhCCCCCCEEEEECCCccchhheeccc-cccccccccccc--ccccc-cccccccceEEEec
Confidence 344454 5899999999987666666666664 5787 4444443 34444 45566777776644
No 58
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=21.72 E-value=1e+02 Score=24.69 Aligned_cols=60 Identities=12% Similarity=-0.035 Sum_probs=42.0
Q ss_pred cCCCCCCEEEEE-cCCC-HhHHHHHHHHHhcCCeEEec-CCCCCHHHHHHHHHhccceEEEEcc
Q 007169 133 HGISKGSCIGLY-FVNR-PEWLIVDHACSAYSFISVPL-YDTLGPDAVKYIVNHASVQAVFCVP 193 (615)
Q Consensus 133 ~Gv~~gd~V~i~-~~n~-~e~~~~~lA~~~~G~v~vpl-~~~~~~~~l~~il~~~~~~~vi~~~ 193 (615)
.++++|+.|.|+ ...+ .-..++.+|=. .|+.++.+ ...-..++....+.+.++..+|...
T Consensus 24 ~~~~~g~~vli~~ga~g~vG~~aiqlAk~-~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~ 86 (189)
T d1gu7a2 24 VKLTPGKDWFIQNGGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVITED 86 (189)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHH-HTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHH
T ss_pred hCCCCCCEEEEEeCCCchHHHHHHHHHhh-cCCeEEEEEecccccchHHhhhhhccccEEEecc
Confidence 379999988887 3444 55666666544 58766544 4445677888888999999888653
No 59
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}
Probab=20.61 E-value=43 Score=30.97 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHhcCC-CceEEEEEeecCccCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHhHHHHHHHH
Q 007169 80 TTHDNFVRAVDTFRD-YKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHAC 158 (615)
Q Consensus 80 tl~~~l~~~a~~~pd-~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (615)
...+.|++..+++=+ +-|+.+. +| ...+-..|..+|+++||.|.+-.-++ ..+..|+
T Consensus 34 ~~v~~fE~~~a~~~g~~~~v~~~---SG----------------t~Al~lal~~l~~~~gdeVi~p~~t~---~a~~~ai 91 (384)
T d1b9ha_ 34 DEVNSFEREFAAHHGAAHALAVT---NG----------------THALELALQVMGVGPGTEVIVPAFTF---ISSSQAA 91 (384)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEES---CH----------------HHHHHHHHHHTTCCTTCEEEEESSSC---THHHHHH
T ss_pred HHHHHHHHHHHHHHCcCeEEEeC---CH----------------HHHHHHHHHHcCCCCCCEEEEecccc---ccccccc
Confidence 456667777665544 4444332 22 22344456677999999987755444 4566789
Q ss_pred HhcCCeEEecCC-----CCCHHHHHHHHHhccceEEEE
Q 007169 159 SAYSFISVPLYD-----TLGPDAVKYIVNHASVQAVFC 191 (615)
Q Consensus 159 ~~~G~v~vpl~~-----~~~~~~l~~il~~~~~~~vi~ 191 (615)
..+|+.++.++. .+.++.+...+.. +.++|+.
T Consensus 92 ~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~-~tk~i~~ 128 (384)
T d1b9ha_ 92 QRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMP 128 (384)
T ss_dssp HHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred cccccccccccccccccccchhhhcccccc-ccccccc
Confidence 999998877652 2356666655432 3344443
No 60
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=20.06 E-value=1.2e+02 Score=24.12 Aligned_cols=58 Identities=7% Similarity=-0.061 Sum_probs=36.8
Q ss_pred HHHcCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe-EEecCCCCCHHHHHHHHHhccceEEEE
Q 007169 130 LIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFI-SVPLYDTLGPDAVKYIVNHASVQAVFC 191 (615)
Q Consensus 130 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v-~vpl~~~~~~~~l~~il~~~~~~~vi~ 191 (615)
+...++++||.|+|+.. +.-=+.+...+...|+. ++..+.. + +-..+.++.++..++.
T Consensus 21 ~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~--~-~r~~~a~~~Ga~~~i~ 79 (174)
T d1e3ia2 21 INTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDIN--G-EKFPKAKALGATDCLN 79 (174)
T ss_dssp HTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC--G-GGHHHHHHTTCSEEEC
T ss_pred HHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccc--h-HHHHHHHHhCCCcccC
Confidence 44568999999999975 55555555556677874 4344432 2 2345666677777664
Done!