BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007170
MAESEKMVALKKAYADIILNTAREAAARIMASERQALRFEKDLSNTKDEALRLLVRVKQM
IDSTTKEAEITSLTKQRKVDELEAQLNEAEDVITDLRSELRWVTDKLEKVKNNPLQPVNG
QTTKEDAYSHEDVKVEAITRSISNSHLEAVTACDMENSPLNLRILDNRCCSTIQKTENSS
DSHLEPDDHTPNIVSTIMKEPEPFRNGCTQRIRALESNLLNGKLPQLGNEDGQCTPLMIE
AIDKAVGKCTAPAPPPKTKNMDVTNKFSGGEVKNLVKPTSRRRKTRFGKAKASTRRSCPD
QPKIASCLSSAPSCCKTYSVNGNVKSKVSAHIRPSIKADNRDNAKICSNLNGKLQQKRSF
NEEEIKISQKQKENVGLQSRDSAPTSIISAPGQLINPCQASSVVNRSVIYSFAKRGNVKS
SEAGLGTADNEAKMKPLLRLDPGLTLIRSGVDPVSGSKNVTVSVKALNKCGLVQKTEEKD
AELKSESALVKPDGGAVENSMVVCSELGGEVVNEPLLSDSKDAKSSIETDESPSEPDFNR
VLKYTFQRKRKKDSMSNSGENTSPDKTIVKRRVTEKENDSQEPEKPTLIKESSRHSRRVA
QVARQPCMDNYITFY

High Scoring Gene Products

Symbol, full name Information P value
AT1G74860 protein from Arabidopsis thaliana 2.4e-40
AT1G19010 protein from Arabidopsis thaliana 3.7e-39

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007170
        (615 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037261 - symbol:AT1G74860 "AT1G74860" species...   340  2.4e-40   2
TAIR|locus:2011231 - symbol:AT1G19010 "AT1G19010" species...   335  3.7e-39   2


>TAIR|locus:2037261 [details] [associations]
            symbol:AT1G74860 "AT1G74860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC008263 EMBL:BT025554
            IPI:IPI00539042 RefSeq:NP_565092.1 UniGene:At.34833
            EnsemblPlants:AT1G74860.1 GeneID:843825 KEGG:ath:AT1G74860
            TAIR:At1g74860 InParanoid:Q9SSG6 OMA:PREHEND PhylomeDB:Q9SSG6
            ProtClustDB:CLSN2689205 Genevestigator:Q9SSG6 Uniprot:Q9SSG6
        Length = 400

 Score = 340 (124.7 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
 Identities = 89/241 (36%), Positives = 139/241 (57%)

Query:     1 MAESEKMVALKKAYADIILNTAREAAARIMASERQALRFEKDLSNTKDEALRLLVRVKQM 60
             MA+ E + ALK+AYAD ILNT +EAAAR+M SE++A R++++L   ++EAL  LVR+KQM
Sbjct:     1 MADPETLAALKRAYADTILNTTKEAAARVMVSEKKARRYQQELVTVRNEALHTLVRLKQM 60

Query:    61 IDSTTKEAEITSLTKQRKVDELEAQLNEAEDVITDLRSELRWVTDKLEKVKNNPLQPVNG 120
             +DS  KE E+ SL +Q+KV+ELEAQL EAED++ +LR ELR + D+L+K+ +   + +  
Sbjct:    61 LDSKVKETEMQSLKQQQKVEELEAQLGEAEDIVGELRLELRVLHDELKKLTDGQ-KHLKK 119

Query:   121 QTTKEDAYSHEDVKVEAITR-SISNSHLEAVTAC-DME-NSPLNLRILDNRCCSTIQKTE 177
                +   +++ D  V  +   S S+ + EAV  C  +E N  +    +     + I    
Sbjct:   120 NHEENLCWNNRDAAVSVMPEVSCSHENTEAVGFCIPVEQNGSVVANGIKVPSLTRINSIN 179

Query:   178 NSSDSHLEPDDHTPNIVSTIMKEPEPFRNGCTQRIRALESNLLNGKLP---QLGN-EDGQ 233
               S    +   H   + S + K  E    G  Q I  ++S++ NG L    ++G+  DG 
Sbjct:   180 RCSYKDNKDQCHY-TLPSILTKRRET--EGLAQMIHTVDSSMANGVLSSSVEVGDVNDGV 236

Query:   234 C 234
             C
Sbjct:   237 C 237

 Score = 117 (46.2 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
 Identities = 24/57 (42%), Positives = 38/57 (66%)

Query:   539 NRVLKYTFQRKRKKDSMSN-SGENTSPDKTIVKRRVTEKENDSQEPEKPTLIKESSR 594
             NR +KYTF+RKRKK+ +SN  G+++  +   +K++  EK++   E  KP+   ESSR
Sbjct:   339 NRCIKYTFKRKRKKEVLSNLEGDSSFEESRNMKQKTVEKDDGYLESLKPSFTSESSR 395

 Score = 48 (22.0 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query:   518 SDSKDAKSSIETDESPS-EPDFNRVLKY--TFQRKRKKDSMSNSGENTSP 564
             S  KD  + I    SP  E + +R L+   T  RK +K+S  N   + SP
Sbjct:   277 SSQKDVGTLISLKTSPPREHENDRKLEISETEARKEEKESCENMEVSASP 326


>TAIR|locus:2011231 [details] [associations]
            symbol:AT1G19010 "AT1G19010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AF360209 EMBL:AY040057
            IPI:IPI00531765 RefSeq:NP_564068.2 UniGene:At.15072 IntAct:Q9C5J5
            EnsemblPlants:AT1G19010.1 GeneID:838482 KEGG:ath:AT1G19010
            TAIR:At1g19010 InParanoid:Q9C5J5 OMA:REDSSNH PhylomeDB:Q9C5J5
            ProtClustDB:CLSN2680035 ArrayExpress:Q9C5J5 Genevestigator:Q9C5J5
            Uniprot:Q9C5J5
        Length = 319

 Score = 335 (123.0 bits), Expect = 3.7e-39, Sum P(2) = 3.7e-39
 Identities = 76/169 (44%), Positives = 113/169 (66%)

Query:     1 MAESEKMVALKKAYADIILNTAREAAARIMASERQALRFEKDLSNTKDEALRLLVRVKQM 60
             M + EK+ ALKKAYA+ ILNTA+EAAAR+M +ER+A  ++++L++ +DEALR  +R+KQ+
Sbjct:     1 MTDPEKLTALKKAYAETILNTAKEAAARVMITERKARGYQQELASVRDEALRACLRLKQI 60

Query:    61 IDSTTKEAEITSLTKQRKVDELEAQLNEAEDVITDLRSELRWVTDKLEKVKNNPLQPVNG 120
              DS  KEAE+ SL KQ+K++ELEAQL EAED++ +LR+ELR     LEK+ N        
Sbjct:    61 YDSKVKEAEMISLQKQQKIEELEAQLGEAEDIVGELRTELRESRYLLEKLANG----CQT 116

Query:   121 QTTKEDAYSHEDVKVEAITRSISNSHLEAVTACDMENSPLNLRILDNRC 169
               +KE+   +E V +E   R  S++H  +V A  ++    +  +  NRC
Sbjct:   117 NLSKEEKAPNEAVSLEV--REDSSNHERSVVASVIKPHMSDRDLSINRC 163

 Score = 111 (44.1 bits), Expect = 3.7e-39, Sum P(2) = 3.7e-39
 Identities = 43/151 (28%), Positives = 76/151 (50%)

Query:   466 ALNKCGLVQKTEEKDAELKSESALVKPDGGAVENSMVVCSELGGEVVNEPLLSDSK--DA 523
             ++N+C      E KD  L +  +++       E  +V  + + G+  +   L++++  +A
Sbjct:   159 SINRCSY---KENKDPCLYTLPSILSR---CREAEVVERNTINGDCADVESLTEARKEEA 212

Query:   524 KSS-IETDESPSEPDFNRVLKYTFQRKRKKDSM-------SNSGENTSPDKTIVKRRVT- 574
             K + IE   +P  P   + +K++++RK  KD         S+S ++   D++  +R  T 
Sbjct:   213 KENDIELSTTPLSPSEKQCIKFSYKRKHNKDGSNSPEGGGSSSQDDDDDDESRSRRHKTG 272

Query:   575 EKENDSQEPEKPTLIKESSRHSRRVAQVARQ 605
             EK+N   +    T   E SR SRRVAQVARQ
Sbjct:   273 EKDNAYLDSFTST---EPSRDSRRVAQVARQ 300


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.126   0.344    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      615       593   0.00084  120 3  11 23  0.49    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  274 KB (2143 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  69.33u 0.09s 69.42t   Elapsed:  00:00:03
  Total cpu time:  69.33u 0.09s 69.42t   Elapsed:  00:00:03
  Start:  Tue May 21 06:52:29 2013   End:  Tue May 21 06:52:32 2013

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