BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007176
MQGVPYVIYWKHSFSCYAACHFLQALLSVVQSSCSHTWDAFQLAHASFRLYCVRNNIVMA
SNSQKGSSKLGPHLLGDPPKIDIALSEMDVQGEENSPENLPAIKIYDDDVTMRFLVCGVP
CTLDTSLLGPLEDGLNALLNIEIRGSKLHNRTSAPPPPLQAGAFSRGVVTMRCDLSTCSS
AHISLLVSGSAQTCFNDQLLENHIKNELIENSQLVHALPNSGDNRLPPSEPRKSASIACG
ASVFEVSMKVSTWASQVLRQLAPDVSYRSLVMLGIASIQGLSVASFEKDDAERLLFFCTR
QGKADHTENSVLTRPPSWLTSPAPSRKRSEPCRESKGVESENVCNVRPKLNSAAMRPIPH
TRHYKMLPFSGFSEIERYDGDQVKANLPVAPLKHSSAGPTPVTHRKSLSSSYQAQQIISL
NPLPLKKHGCGRAPIQVCSEEEFLRDVMQFLILRGHTRLVPQGGLAEFPDAILNAKRLDL
FNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAH
DDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPQCSV
TNFKKKSQKTSNGY

High Scoring Gene Products

Symbol, full name Information P value
AT3G43240 protein from Arabidopsis thaliana 9.4e-256

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007176
        (614 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084731 - symbol:AT3G43240 species:3702 "Arabi...  2462  9.4e-256  1


>TAIR|locus:2084731 [details] [associations]
            symbol:AT3G43240 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001606 InterPro:IPR001965 Pfam:PF01388
            PROSITE:PS50016 PROSITE:PS51011 SMART:SM00249 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573
            EMBL:AL353871 EMBL:BT010580 IPI:IPI00522764 PIR:T49238
            RefSeq:NP_189910.2 UniGene:At.36303 ProteinModelPortal:Q6NQ79
            SMR:Q6NQ79 IntAct:Q6NQ79 PaxDb:Q6NQ79 PRIDE:Q6NQ79
            EnsemblPlants:AT3G43240.1 GeneID:823399 KEGG:ath:AT3G43240
            TAIR:At3g43240 eggNOG:NOG285559 HOGENOM:HOG000005827
            InParanoid:Q6NQ79 OMA:LQNRISA PhylomeDB:Q6NQ79
            ProtClustDB:CLSN2680884 Genevestigator:Q6NQ79 Uniprot:Q6NQ79
        Length = 747

 Score = 2462 (871.7 bits), Expect = 9.4e-256, P = 9.4e-256
 Identities = 462/613 (75%), Positives = 527/613 (85%)

Query:     2 QGVPYVIYWKHSFSCYAACHFLQALLSVVQSSCSHTWDAFQLAHASFRLYCVRNNIVMAS 61
             +GV YVIYWK+ FS YAACHF  +L SV+QSSCS TWD F +A ASFRLYC  +N V+ S
Sbjct:   133 KGVQYVIYWKNVFSKYAACHFRHSLFSVIQSSCSDTWDVFHVAEASFRLYCTSDNAVLPS 192

Query:    62 NS-QKGSSKLGPHLLGDPPKIDIALSEMDVQGEENSPENLPAIKIYDDDVTMRFLVCGVP 120
             NS +K + ++GP LLG+PPKID+   E D   EENS E+LP+IKIYD+DVT+RFL+CG P
Sbjct:   193 NSNRKMNYEMGPCLLGEPPKIDVVSPEADELEEENSLESLPSIKIYDEDVTVRFLLCGPP 252

Query:   121 CTLDTSLLGPLEDGLNALLNIEIRGSKLHNRTSAPPPPLQAGAFSRGVVTMRCDLSTCSS 180
             CT+DT LLG L DGLNALL IE+RGSKLHNR+SAP PPLQAG F+RGVVTMRCD+STCSS
Sbjct:   253 CTVDTFLLGSLMDGLNALLRIEMRGSKLHNRSSAPAPPLQAGTFTRGVVTMRCDVSTCSS 312

Query:   181 AHISLLVSGSAQTCFNDQLLENHIKNELIENSQLVHALPNSGDNRLPPSEPRKSASIACG 240
             AHIS+LVSG+AQTCF+DQLLENHIK+E++E  QLVH++ NS + +   SEPR+SASIACG
Sbjct:   313 AHISMLVSGNAQTCFSDQLLENHIKHEVVEKIQLVHSVVNSEETKRGFSEPRRSASIACG 372

Query:   241 ASVFEVSMKVSTWASQVLRQLAPDVSYRSLVMLGIASIQGLSVASFEKDDAERLLFFCTR 300
             ASV EVSM+V TWA QVLRQLAPDVSYRSLV+LG+ASIQGLSVASFEKDDAERLLFFC +
Sbjct:   373 ASVCEVSMQVPTWALQVLRQLAPDVSYRSLVVLGVASIQGLSVASFEKDDAERLLFFCGQ 432

Query:   301 QGKADHTENSVLTRPPSWLTSPAPSRKRSEPCRESKGVESENVCNVRPKLNSAAMRPIPH 360
             Q       +++L++ P+WLT P P+RKRSEPCRESK  E EN      K+N AA+RPIPH
Sbjct:   433 QINDTSNHDALLSKIPNWLTPPLPTRKRSEPCRESK--EIENGGPTSRKINVAALRPIPH 490

Query:   361 TRHYKMLPFSGFSEIERYDGDQVKANLPVAPLKHSSAGPTPVTHRKSLSSSYQAQQIISL 420
             TR +KM+PFSG+SEI R+DGD  K +LP+ P KH ++G TPVTHRK+ S SYQ +QIISL
Sbjct:   491 TRRHKMIPFSGYSEIGRFDGDHTKGSLPMPP-KHGASGGTPVTHRKAFSGSYQRKQIISL 549

Query:   421 NPLPLKKHGCGRAPIQVCSEEEFLRDVMQFLILRGHTRLVPQGGLAEFPDAILNAKRLDL 480
             NPLPLKKH CGRA IQVCSEEEFLRDVMQFL++RGHTRLVP GGLAEFPDA+LN+KRLDL
Sbjct:   550 NPLPLKKHDCGRAHIQVCSEEEFLRDVMQFLLIRGHTRLVPPGGLAEFPDAVLNSKRLDL 609

Query:   481 FNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAH 540
             FNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYE AH
Sbjct:   610 FNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYEYAH 669

Query:   541 DDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPQCSV 600
             DDVDGECCL+C SS AGDWVNCG CGEWAHFGCDRR GLGAFKDYAKTDGLEYVCP CSV
Sbjct:   670 DDVDGECCLICRSSTAGDWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGLEYVCPNCSV 729

Query:   601 TNFKKKSQKTSNG 613
             +N++KKSQKTSNG
Sbjct:   730 SNYRKKSQKTSNG 742


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      614       614   0.00088  120 3  11 22  0.39    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  365 KB (2181 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  53.52u 0.78s 54.30t   Elapsed:  00:00:03
  Total cpu time:  53.52u 0.78s 54.30t   Elapsed:  00:00:03
  Start:  Tue May 21 07:12:53 2013   End:  Tue May 21 07:12:56 2013

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