Query         007177
Match_columns 614
No_of_seqs    409 out of 2837
Neff          7.5 
Searched_HMMs 29240
Date          Mon Mar 25 19:07:10 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007177hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b99_A Mitogen-activated prote 100.0 6.1E-67 2.1E-71  564.5  35.3  340   14-356    50-391 (398)
  2 4fih_A Serine/threonine-protei 100.0 3.1E-60 1.1E-64  501.3  24.9  257   18-315    74-331 (346)
  3 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-60 9.2E-65  494.8  23.0  259   17-314    31-297 (311)
  4 4b9d_A Serine/threonine-protei 100.0 3.7E-60 1.3E-64  501.4  23.6  259   15-313    21-282 (350)
  5 3hyh_A Carbon catabolite-derep 100.0 1.1E-59 3.8E-64  482.9  25.9  255   17-313    12-268 (275)
  6 3n9x_A Phosphotransferase; mal 100.0 2.8E-58 9.6E-63  502.3  37.7  350    8-359    16-412 (432)
  7 3rp9_A Mitogen-activated prote 100.0 1.2E-58 4.2E-63  508.1  34.5  347   12-360    47-448 (458)
  8 4fie_A Serine/threonine-protei 100.0 6.4E-59 2.2E-63  503.0  27.4  258   17-315   150-408 (423)
  9 3fpq_A Serine/threonine-protei 100.0 1.5E-58 5.2E-63  478.2  28.1  261   16-313    23-288 (290)
 10 3ubd_A Ribosomal protein S6 ki 100.0 2.4E-59 8.3E-64  486.9  17.5  259   15-314    21-288 (304)
 11 1cm8_A Phosphorylated MAP kina 100.0 1.6E-56 5.3E-61  478.3  35.4  334   14-358    21-355 (367)
 12 4g3f_A NF-kappa-beta-inducing  100.0 8.7E-58   3E-62  481.0  23.3  258   17-316    57-331 (336)
 13 3oz6_A Mitogen-activated prote 100.0 1.6E-56 5.4E-61  480.7  32.3  339   17-361     8-381 (388)
 14 4f9c_A Cell division cycle 7-r 100.0 7.3E-57 2.5E-61  480.2  26.0  285   17-314    20-359 (361)
 15 2fst_X Mitogen-activated prote 100.0 2.6E-56 8.8E-61  476.9  28.2  334   14-358    25-359 (367)
 16 3ttj_A Mitogen-activated prote 100.0 3.7E-55 1.3E-59  482.3  30.9  331   16-356    60-403 (464)
 17 3qyz_A Mitogen-activated prote 100.0 6.6E-54 2.3E-58  456.4  36.2  341   13-358    22-362 (364)
 18 4g31_A Eukaryotic translation  100.0 9.2E-56 3.2E-60  459.9  17.5  262   19-315     6-287 (299)
 19 3uto_A Twitchin; kinase, muscl 100.0 1.2E-53 4.1E-58  481.4  27.2  260   17-316   156-419 (573)
 20 4exu_A Mitogen-activated prote 100.0   5E-52 1.7E-56  443.5  32.9  330   15-356    39-370 (371)
 21 4asz_A BDNF/NT-3 growth factor 100.0 3.1E-53 1.1E-57  440.7  22.6  266    8-315     3-288 (299)
 22 3v5w_A G-protein coupled recep 100.0 5.3E-53 1.8E-57  477.0  26.3  260   17-315   188-457 (689)
 23 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-51 5.3E-56  434.4  34.9  337   13-352     6-352 (353)
 24 3omv_A RAF proto-oncogene seri 100.0 1.6E-52 5.5E-57  436.3  25.7  259   15-308    33-294 (307)
 25 3coi_A Mitogen-activated prote 100.0 2.1E-51 7.2E-56  434.8  31.9  330   16-356    22-352 (353)
 26 3niz_A Rhodanese family protei 100.0 2.4E-51 8.2E-56  427.6  30.1  299    6-315     9-308 (311)
 27 2xrw_A Mitogen-activated prote 100.0 1.8E-51 6.1E-56  439.3  29.4  330   16-355    23-365 (371)
 28 4aoj_A High affinity nerve gro 100.0 1.4E-51 4.9E-56  433.8  27.3  252   17-308    40-313 (329)
 29 4gt4_A Tyrosine-protein kinase 100.0 1.9E-51 6.3E-56  429.1  24.3  255   15-308    23-300 (308)
 30 3o0g_A Cell division protein k 100.0 1.3E-50 4.4E-55  416.9  28.7  287   18-315     2-290 (292)
 31 3fe3_A MAP/microtubule affinit 100.0 4.4E-50 1.5E-54  422.2  30.2  263   12-316     9-273 (328)
 32 1ob3_A PFPK5, cell division co 100.0 1.4E-50 4.7E-55  416.2  25.0  284   18-313     2-286 (288)
 33 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.5E-50 8.4E-55  423.0  25.1  302    2-314    18-325 (329)
 34 4ase_A Vascular endothelial gr 100.0 1.6E-50 5.3E-55  429.6  23.6  256   16-308    62-341 (353)
 35 3pg1_A Mitogen-activated prote 100.0 2.2E-49 7.4E-54  420.2  31.0  332   15-355    19-361 (362)
 36 3g33_A Cell division protein k 100.0 4.2E-50 1.4E-54  416.2  24.6  289   16-314     7-303 (308)
 37 4agu_A Cyclin-dependent kinase 100.0 1.4E-49 4.9E-54  412.1  28.3  292   17-317     2-294 (311)
 38 2yab_A Death-associated protei 100.0 1.9E-49 6.4E-54  423.1  29.6  269    8-314     2-279 (361)
 39 3mtl_A Cell division protein k 100.0 3.3E-50 1.1E-54  421.2  23.1  288   18-316     2-290 (324)
 40 2pmi_A Negative RE, cyclin-dep 100.0 4.5E-50 1.5E-54  418.8  22.2  288   17-316     4-302 (317)
 41 4e7w_A Glycogen synthase kinas 100.0 3.1E-49 1.1E-53  425.8  26.1  287   17-318    39-332 (394)
 42 1j1b_A Glycogen synthase kinas 100.0 7.3E-49 2.5E-53  426.5  28.5  287   18-318    54-347 (420)
 43 3soa_A Calcium/calmodulin-depe 100.0 5.8E-49   2E-53  430.5  27.0  261   17-314    10-274 (444)
 44 3zgw_A Maternal embryonic leuc 100.0 1.1E-48 3.7E-53  415.0  27.4  261   15-315     7-268 (347)
 45 3lij_A Calcium/calmodulin depe 100.0 1.1E-48 3.8E-53  433.5  27.8  259   18-315    37-299 (494)
 46 1o6l_A RAC-beta serine/threoni 100.0 1.9E-48 6.4E-53  411.5  27.8  257   17-314     4-267 (337)
 47 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.7E-49   2E-53  418.0  23.8  258   16-314    21-287 (353)
 48 3eb0_A Putative uncharacterize 100.0   1E-48 3.6E-53  419.4  25.9  286   16-315     5-329 (383)
 49 3mwu_A Calmodulin-domain prote 100.0 1.1E-48 3.6E-53  432.7  26.1  262   16-316    20-285 (486)
 50 2bdw_A Hypothetical protein K1 100.0 1.7E-48 5.8E-53  415.5  26.0  259   18-314    29-291 (362)
 51 3mi9_A Cell division protein k 100.0 8.5E-49 2.9E-53  414.2  22.8  299   14-314    13-318 (351)
 52 3gni_B Strad alpha; kinase fol 100.0 3.3E-48 1.1E-52  415.9  27.6  297   15-316    22-342 (389)
 53 3fxz_A Serine/threonine-protei 100.0 1.7E-48 5.7E-53  403.5  24.4  259   15-314    17-276 (297)
 54 2i6l_A Mitogen-activated prote 100.0 2.5E-48 8.6E-53  402.7  25.4  300   13-317     6-315 (320)
 55 1tki_A Titin; serine kinase, m 100.0 3.7E-48 1.3E-52  405.9  26.8  258   16-314     3-264 (321)
 56 2r3i_A Cell division protein k 100.0 2.2E-48 7.6E-53  400.5  24.6  289   17-316     2-292 (299)
 57 1ua2_A CAK, cell division prot 100.0 2.3E-48 7.9E-53  410.8  25.2  289   16-316     8-300 (346)
 58 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-47 3.6E-52  426.7  31.2  320   15-391    33-368 (504)
 59 2y0a_A Death-associated protei 100.0 5.5E-48 1.9E-52  405.1  27.3  263   14-314     7-278 (326)
 60 3kvw_A DYRK2, dual specificity 100.0 1.2E-47 4.2E-52  418.1  30.8  282   15-314    94-415 (429)
 61 4aaa_A Cyclin-dependent kinase 100.0 1.3E-48 4.4E-53  409.7  22.1  291   14-313    21-312 (331)
 62 1fot_A TPK1 delta, CAMP-depend 100.0 7.3E-48 2.5E-52  403.6  26.9  254   17-314     5-265 (318)
 63 3hmm_A TGF-beta receptor type- 100.0 8.5E-49 2.9E-53  408.3  18.6  273   17-308     2-291 (303)
 64 3llt_A Serine/threonine kinase 100.0 1.2E-47 4.1E-52  406.5  27.5  283   12-312    29-360 (360)
 65 3nyv_A Calmodulin-domain prote 100.0 3.4E-48 1.2E-52  428.0  24.1  261   17-316    25-290 (484)
 66 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.3E-48 1.1E-52  409.5  22.7  257   16-314     7-265 (336)
 67 1xjd_A Protein kinase C, theta 100.0 4.8E-48 1.6E-52  409.7  23.6  260   15-315    14-277 (345)
 68 3kk8_A Calcium/calmodulin depe 100.0 4.7E-47 1.6E-51  387.7  30.1  264   17-318     5-272 (284)
 69 3a8x_A Protein kinase C IOTA t 100.0 2.6E-47 8.9E-52  403.9  29.0  267   17-315     8-283 (345)
 70 3a62_A Ribosomal protein S6 ki 100.0 2.1E-47 7.2E-52  400.8  27.8  261   13-314    12-283 (327)
 71 4dc2_A Protein kinase C IOTA t 100.0 1.6E-47 5.4E-52  413.1  26.8  267   16-314    50-325 (396)
 72 4aw2_A Serine/threonine-protei 100.0 3.7E-48 1.3E-52  423.2  21.3  266   16-314    72-345 (437)
 73 2i0e_A Protein kinase C-beta I 100.0 1.6E-47 5.4E-52  407.0  25.2  258   16-314    18-283 (353)
 74 1blx_A Cyclin-dependent kinase 100.0 3.7E-47 1.3E-51  396.2  27.5  291   16-316     9-305 (326)
 75 1rdq_E PKA C-alpha, CAMP-depen 100.0   2E-47 6.7E-52  405.7  25.7  256   15-314    38-300 (350)
 76 3c0i_A Peripheral plasma membr 100.0 5.2E-48 1.8E-52  409.6  20.4  260   17-314    23-293 (351)
 77 3rgf_A Cyclin-dependent kinase 100.0   7E-48 2.4E-52  416.0  21.8  291   17-315    19-341 (405)
 78 2a2a_A Death-associated protei 100.0 5.6E-47 1.9E-51  395.6  27.4  267   11-315     5-280 (321)
 79 3tki_A Serine/threonine-protei 100.0 1.4E-47   5E-52  401.6  23.0  264   16-315     5-269 (323)
 80 2eue_A Carbon catabolite derep 100.0 2.4E-47 8.4E-52  388.7  23.1  260   13-313     8-268 (275)
 81 3e3p_A Protein kinase, putativ 100.0 2.4E-47 8.3E-52  403.4  23.6  292   17-319    22-326 (360)
 82 4fr4_A YANK1, serine/threonine 100.0 2.8E-47 9.6E-52  409.6  24.3  263   16-315    13-279 (384)
 83 2qr7_A Ribosomal protein S6 ki 100.0 2.9E-47 9.8E-52  403.0  23.7  257   17-316    21-286 (342)
 84 3uc3_A Serine/threonine-protei 100.0 7.8E-47 2.7E-51  402.4  27.1  262   14-314    16-281 (361)
 85 3nsz_A CK II alpha, casein kin 100.0   7E-47 2.4E-51  395.1  26.1  288   13-316    31-328 (330)
 86 2r5t_A Serine/threonine-protei 100.0 3.8E-47 1.3E-51  407.1  24.4  259   15-314    35-300 (373)
 87 1kob_A Twitchin; kinase, intra 100.0 7.3E-47 2.5E-51  406.8  26.7  258   17-314    50-311 (387)
 88 3v8s_A RHO-associated protein  100.0 1.3E-47 4.3E-52  415.7  20.8  265   15-314    66-336 (410)
 89 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-47 1.9E-51  390.9  24.3  261   16-312    11-297 (298)
 90 3p1a_A MYT1 kinase, membrane-a 100.0 9.6E-47 3.3E-51  392.6  26.2  252   18-313    57-310 (311)
 91 3kn6_A Ribosomal protein S6 ki 100.0   3E-47   1E-51  399.6  22.1  263   19-316     9-279 (325)
 92 2vd5_A DMPK protein; serine/th 100.0 2.7E-47 9.4E-52  413.3  22.5  266   15-314    58-334 (412)
 93 4ejn_A RAC-alpha serine/threon 100.0 3.3E-47 1.1E-51  416.2  23.3  258   16-314   146-411 (446)
 94 1z57_A Dual specificity protei 100.0 3.5E-46 1.2E-50  389.3  28.9  284   15-315    11-336 (339)
 95 3is5_A Calcium-dependent prote 100.0 1.6E-46 5.6E-51  385.5  25.4  257   16-313    20-284 (285)
 96 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-46 7.6E-51  381.7  25.9  258   16-314     7-268 (277)
 97 1t4h_A Serine/threonine-protei 100.0 4.3E-46 1.5E-50  382.5  27.9  262   15-313    23-288 (290)
 98 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-46 5.2E-51  398.2  25.1  257   17-315    52-313 (349)
 99 3hko_A Calcium/calmodulin-depe 100.0 1.2E-46 4.1E-51  395.8  22.7  268   17-316    25-339 (345)
100 2y94_A 5'-AMP-activated protei 100.0 2.5E-46 8.7E-51  412.8  25.8  262   12-314    10-273 (476)
101 1wak_A Serine/threonine-protei 100.0 4.7E-46 1.6E-50  397.7  27.0  283   17-313    36-397 (397)
102 2vx3_A Dual specificity tyrosi 100.0   1E-45 3.5E-50  396.1  29.0  280   17-314    53-379 (382)
103 3qd2_B Eukaryotic translation  100.0 1.2E-46   4E-51  392.2  21.0  262   18-314     6-332 (332)
104 3fdn_A Serine/threonine-protei 100.0 3.5E-46 1.2E-50  381.0  23.8  257   17-316     8-266 (279)
105 2jam_A Calcium/calmodulin-depe 100.0 6.4E-46 2.2E-50  384.0  25.9  258   17-315     8-269 (304)
106 2ac3_A MAP kinase-interacting  100.0 1.8E-46 6.1E-51  389.6  21.7  280   17-315    11-303 (316)
107 2c30_A Serine/threonine-protei 100.0 8.6E-46 2.9E-50  387.6  26.8  255   19-314    46-301 (321)
108 2x4f_A Myosin light chain kina 100.0 3.7E-46 1.3E-50  399.2  24.5  257   18-314    87-349 (373)
109 1nxk_A MAP kinase-activated pr 100.0 2.1E-46 7.1E-51  404.8  22.7  259   16-315    59-329 (400)
110 2eu9_A Dual specificity protei 100.0 2.1E-45 7.1E-50  386.3  29.0  284   16-316    17-342 (355)
111 3lm5_A Serine/threonine-protei 100.0 2.4E-46 8.1E-51  392.4  21.7  269    9-315    19-295 (327)
112 3ork_A Serine/threonine protei 100.0 1.1E-46 3.9E-51  391.5  18.9  271   14-314     8-280 (311)
113 1u5q_A Serine/threonine protei 100.0 6.3E-46 2.1E-50  393.6  24.7  258   15-313    51-311 (348)
114 3dbq_A Dual specificity protei 100.0 7.5E-46 2.6E-50  391.2  25.2  262   16-314     7-280 (343)
115 3bhy_A Death-associated protei 100.0 8.8E-46   3E-50  378.1  24.7  260   18-315     5-273 (283)
116 3byv_A Rhoptry kinase; malaria 100.0 4.3E-47 1.5E-51  406.0  14.6  254   17-314    72-366 (377)
117 2rku_A Serine/threonine-protei 100.0 3.4E-45 1.2E-49  376.5  28.1  263   13-316    10-274 (294)
118 3pfq_A PKC-B, PKC-beta, protei 100.0 7.5E-46 2.6E-50  425.8  25.8  258   16-314   339-604 (674)
119 3i6u_A CDS1, serine/threonine- 100.0 3.8E-46 1.3E-50  405.0  21.7  261   17-313   134-405 (419)
120 2owb_A Serine/threonine-protei 100.0 2.9E-45   1E-49  385.4  27.6  263   13-316    36-300 (335)
121 1x8b_A WEE1HU, WEE1-like prote 100.0 1.5E-45 5.2E-50  375.4  24.6  251   18-314    11-286 (289)
122 3fme_A Dual specificity mitoge 100.0 1.1E-45 3.8E-50  378.2  23.7  261   16-314     5-273 (290)
123 2vgo_A Serine/threonine-protei 100.0 1.4E-45 4.8E-50  377.5  24.4  259   15-316    11-271 (284)
124 4eqm_A Protein kinase; transfe 100.0 2.4E-45 8.1E-50  379.1  26.2  266   15-315     8-275 (294)
125 2y7j_A Phosphorylase B kinase  100.0 5.2E-45 1.8E-49  388.8  29.3  259   18-312    94-364 (365)
126 1phk_A Phosphorylase kinase; g 100.0 4.1E-45 1.4E-49  375.9  27.3  265   15-315    14-291 (298)
127 2zmd_A Dual specificity protei 100.0   2E-45   7E-50  395.6  26.1  260   18-314    56-327 (390)
128 3dls_A PAS domain-containing s 100.0 4.1E-46 1.4E-50  392.7  19.7  250   17-314    23-281 (335)
129 2j7t_A Serine/threonine-protei 100.0 1.2E-45 4.2E-50  380.5  22.7  269    9-315    10-283 (302)
130 2yex_A Serine/threonine-protei 100.0 1.2E-45 4.2E-50  375.2  22.2  261   18-315     7-269 (276)
131 3cok_A Serine/threonine-protei 100.0 1.5E-45 5.1E-50  375.7  22.7  257   17-314    10-269 (278)
132 2wtk_C Serine/threonine-protei 100.0 3.6E-45 1.2E-49  377.6  25.6  267   17-318     4-274 (305)
133 3q60_A ROP5B; pseudokinase, tr 100.0 3.6E-46 1.2E-50  397.8  18.6  269   18-314    62-359 (371)
134 2acx_A G protein-coupled recep 100.0 8.6E-46 2.9E-50  415.8  22.0  262   15-314   181-451 (576)
135 2wei_A Calmodulin-domain prote 100.0 1.8E-45 6.1E-50  377.6  22.3  260   17-315    21-284 (287)
136 1q8y_A SR protein kinase; tran 100.0 4.5E-45 1.5E-49  387.5  25.8  287   16-316    17-342 (373)
137 3eqc_A Dual specificity mitoge 100.0 1.9E-45 6.5E-50  389.8  22.4  284   16-314    31-331 (360)
138 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.9E-45 1.3E-49  408.8  26.1  262   16-314   183-455 (543)
139 2ycf_A Serine/threonine-protei 100.0 2.9E-45   1E-49  382.5  22.2  260   17-313     9-280 (322)
140 2vwi_A Serine/threonine-protei 100.0 1.3E-45 4.5E-50  379.8  18.9  284    1-315     1-295 (303)
141 2h6d_A 5'-AMP-activated protei 100.0 9.8E-45 3.3E-49  369.0  23.6  257   16-314     9-268 (276)
142 3com_A Serine/threonine-protei 100.0 1.3E-44 4.6E-49  375.2  24.9  258   16-315    27-286 (314)
143 2w5a_A Serine/threonine-protei 100.0 6.4E-45 2.2E-49  370.9  21.6  259   17-313     5-273 (279)
144 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-45 4.5E-50  391.7  16.9  263   18-314    54-328 (355)
145 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-44 8.8E-49  375.1  26.3  266   14-314    20-293 (326)
146 3an0_A Dual specificity mitoge 100.0 1.8E-44 6.2E-49  379.1  24.8  262   15-315    48-318 (340)
147 3p86_A Serine/threonine-protei 100.0 3.7E-44 1.3E-48  373.4  26.9  256   16-312    35-298 (309)
148 3kul_A Ephrin type-A receptor  100.0 2.5E-44 8.5E-49  377.1  25.4  258   12-307    43-306 (325)
149 4euu_A Serine/threonine-protei 100.0 2.2E-44 7.7E-49  375.3  23.4  278   15-310     6-305 (319)
150 3a7i_A MST3 kinase, serine/thr 100.0   9E-44 3.1E-48  367.4  26.6  257   15-313    19-276 (303)
151 3qup_A Tyrosine-protein kinase 100.0 3.5E-44 1.2E-48  373.9  22.8  268   14-314    19-305 (323)
152 3lb7_A RAF proto-oncogene seri 100.0 1.4E-43 4.9E-48  368.4  26.0  262   15-311    33-297 (307)
153 2dyl_A Dual specificity mitoge 100.0 7.4E-44 2.5E-48  369.6  23.3  263   16-315    23-291 (318)
154 2pml_X PFPK7, Ser/Thr protein  100.0 2.5E-44 8.6E-49  378.5  19.8  273   17-314    30-329 (348)
155 3aln_A Dual specificity mitoge 100.0 3.2E-44 1.1E-48  375.1  20.3  263   16-314    20-292 (327)
156 2psq_A Fibroblast growth facto 100.0 2.1E-43 7.1E-48  377.2  26.9  253   17-308    80-358 (370)
157 3fhr_A MAP kinase-activated pr 100.0 8.8E-44   3E-48  374.7  23.5  267   11-315    21-295 (336)
158 3s95_A LIMK-1, LIM domain kina 100.0 5.3E-44 1.8E-48  370.7  21.3  260   16-314     8-280 (310)
159 1zy4_A Serine/threonine-protei 100.0 1.8E-43 6.3E-48  362.9  25.1  262   18-313     6-289 (303)
160 3cek_A Dual specificity protei 100.0 1.8E-43 6.2E-48  367.2  24.2  264   14-314    24-299 (313)
161 2clq_A Mitogen-activated prote 100.0   2E-43 6.8E-48  362.4  24.2  258   20-315    24-286 (295)
162 3vhe_A Vascular endothelial gr 100.0 1.3E-43 4.3E-48  374.8  23.3  256   16-308    20-349 (359)
163 3l9p_A Anaplastic lymphoma kin 100.0 5.8E-44   2E-48  380.9  20.9  257   17-312    70-343 (367)
164 1mp8_A Focal adhesion kinase 1 100.0 2.6E-43   9E-48  360.3  24.1  252   16-308    13-270 (281)
165 3a99_A Proto-oncogene serine/t 100.0 5.1E-44 1.7E-48  373.5  18.7  254   14-315    39-301 (320)
166 4hcu_A Tyrosine-protein kinase 100.0 3.4E-43 1.2E-47  356.9  23.9  250   16-308     8-260 (269)
167 2ivs_A Proto-oncogene tyrosine 100.0 3.2E-43 1.1E-47  364.1  24.2  254   16-308    21-305 (314)
168 1csn_A Casein kinase-1; phosph 100.0   3E-43   1E-47  361.6  23.7  259   16-308     8-277 (298)
169 2izr_A Casein kinase I isoform 100.0 1.9E-43 6.6E-48  370.2  22.4  257   16-307     7-274 (330)
170 2h34_A Serine/threonine-protei 100.0 7.3E-43 2.5E-47  362.8  25.5  256   15-307    31-289 (309)
171 3ugc_A Tyrosine-protein kinase 100.0 2.4E-43 8.2E-48  362.9  21.4  271   16-307     8-284 (295)
172 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.8E-43   2E-47  354.7  23.6  250   16-308     6-258 (268)
173 3gen_A Tyrosine-protein kinase 100.0 5.6E-43 1.9E-47  357.6  23.3  251   15-308    21-274 (283)
174 1luf_A Muscle-specific tyrosin 100.0 7.7E-43 2.6E-47  366.1  24.0  254   16-308    45-329 (343)
175 1xbb_A Tyrosine-protein kinase 100.0   1E-42 3.6E-47  357.7  24.5  255   15-307    13-272 (291)
176 2iwi_A Serine/threonine-protei 100.0 2.4E-43 8.3E-48  365.7  19.8  253   15-315    28-291 (312)
177 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-42 3.9E-47  357.4  24.5  265    8-307    14-281 (289)
178 3tt0_A Basic fibroblast growth 100.0 2.1E-42 7.3E-47  370.5  27.4  254   16-308    67-346 (382)
179 1mqb_A Ephrin type-A receptor  100.0 2.7E-42 9.3E-47  362.7  27.3  261   10-308    36-303 (333)
180 4f0f_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47  353.2  26.6  251   15-307    16-282 (287)
181 3p23_A Serine/threonine-protei 100.0 1.2E-43 4.2E-48  387.0  17.4  258   18-314    24-290 (432)
182 3kfa_A Tyrosine-protein kinase 100.0 1.1E-42 3.7E-47  356.0  23.3  251   15-307    10-264 (288)
183 3soc_A Activin receptor type-2 100.0 2.6E-43   9E-48  368.5  18.8  275   15-307    21-311 (322)
184 3ll6_A Cyclin G-associated kin 100.0 1.1E-42 3.8E-47  362.9  23.2  259   17-310    27-304 (337)
185 3brb_A Proto-oncogene tyrosine 100.0 1.4E-42 4.8E-47  360.2  23.7  261   15-308    31-302 (313)
186 1t46_A HOMO sapiens V-KIT hard 100.0 1.8E-42   6E-47  358.4  24.2  254   17-308    22-301 (313)
187 2qol_A Ephrin receptor; recept 100.0 6.3E-43 2.2E-47  374.0  21.3  259   11-307    38-302 (373)
188 1rjb_A FL cytokine receptor; k 100.0 1.8E-42   6E-47  364.2  23.8  256   16-309    43-329 (344)
189 4hgt_A Casein kinase I isoform 100.0 8.1E-43 2.8E-47  357.7  20.7  257   15-307     6-273 (296)
190 3kex_A Receptor tyrosine-prote 100.0 5.4E-43 1.8E-47  366.3  19.7  261    8-308     3-270 (325)
191 3kmu_A ILK, integrin-linked ki 100.0 2.2E-42 7.5E-47  349.6  23.2  250   16-307     8-263 (271)
192 3uzp_A CKI-delta, CKID, casein 100.0   3E-42   1E-46  353.8  24.5  256   16-307     7-273 (296)
193 4e5w_A Tyrosine-protein kinase 100.0   3E-42   1E-46  355.2  24.5  273   14-307    17-295 (302)
194 3poz_A Epidermal growth factor 100.0 1.2E-42 4.2E-47  364.2  21.9  253   16-308    13-272 (327)
195 1p4o_A Insulin-like growth fac 100.0 1.8E-42 6.1E-47  360.5  23.0  254   16-308    23-293 (322)
196 3cbl_A C-FES, proto-oncogene t 100.0 9.5E-43 3.3E-47  372.7  20.6  253   16-307   112-367 (377)
197 3lxl_A Tyrosine-protein kinase 100.0 8.7E-43   3E-47  364.5  19.7  273   14-308    19-297 (327)
198 4fvq_A Tyrosine-protein kinase 100.0 9.7E-43 3.3E-47  356.6  19.5  246   16-308     6-269 (289)
199 1u59_A Tyrosine-protein kinase 100.0 4.1E-42 1.4E-46  352.6  23.9  255   17-310     8-268 (287)
200 2xir_A Vascular endothelial gr 100.0 2.7E-42 9.2E-47  357.5  22.8  256   16-308    25-304 (316)
201 3m2w_A MAP kinase-activated pr 100.0 3.7E-42 1.3E-46  355.5  23.7  250    9-316     8-265 (299)
202 3dtc_A Mitogen-activated prote 100.0 5.2E-42 1.8E-46  347.9  24.0  249   16-308     5-267 (271)
203 3t9t_A Tyrosine-protein kinase 100.0 4.2E-42 1.4E-46  347.4  23.2  250   16-308     6-258 (267)
204 2pvf_A Fibroblast growth facto 100.0 7.1E-42 2.4E-46  359.0  25.8  254   16-308    33-312 (334)
205 2yfx_A Tyrosine-protein kinase 100.0 2.4E-42 8.3E-47  361.2  22.1  258   16-312    28-302 (327)
206 1byg_A CSK, protein (C-termina 100.0 2.7E-42 9.2E-47  352.0  21.8  259    1-307     1-266 (278)
207 3cc6_A Protein tyrosine kinase 100.0 5.1E-42 1.7E-46  350.5  23.0  252   16-308    10-267 (281)
208 3op5_A Serine/threonine-protei 100.0 3.9E-42 1.3E-46  365.7  22.6  269   16-307    33-322 (364)
209 2i1m_A Macrophage colony-stimu 100.0 9.5E-42 3.2E-46  357.0  25.0  255   16-308    44-320 (333)
210 2v62_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47  366.2  19.0  266   16-308    35-322 (345)
211 2rio_A Serine/threonine-protei 100.0 3.1E-42 1.1E-46  375.9  22.0  262   15-313    12-301 (434)
212 3q4u_A Activin receptor type-1 100.0 1.8E-42 6.2E-47  356.3  18.9  263   16-307     6-295 (301)
213 2wqm_A Serine/threonine-protei 100.0 1.8E-41 6.1E-46  351.3  26.2  256   14-308    28-291 (310)
214 3lzb_A Epidermal growth factor 100.0 6.3E-42 2.2E-46  359.2  22.6  253   15-307    12-271 (327)
215 3f66_A Hepatocyte growth facto 100.0 1.6E-41 5.4E-46  349.5  24.8  255   16-307    23-284 (298)
216 1fvr_A Tyrosine-protein kinase 100.0   3E-42   1E-46  360.5  19.2  250   17-308    24-294 (327)
217 2qkw_B Protein kinase; three-h 100.0 4.5E-43 1.5E-47  365.8  12.8  268   14-309    35-310 (321)
218 3pls_A Macrophage-stimulating  100.0   3E-41   1E-45  346.7  26.2  254   18-308    21-281 (298)
219 2buj_A Serine/threonine-protei 100.0 4.7E-42 1.6E-46  356.5  20.2  262   16-308    27-300 (317)
220 2jii_A Serine/threonine-protei 100.0   3E-42   1E-46  364.7  19.1  257   17-307    41-329 (352)
221 3dzo_A Rhoptry kinase domain;  100.0   2E-42 6.8E-47  375.1  17.6  262   10-313    69-369 (413)
222 2a19_B Interferon-induced, dou 100.0 9.6E-42 3.3E-46  347.6  21.4  248   18-312    11-272 (284)
223 1qpc_A LCK kinase; alpha beta  100.0 1.6E-41 5.5E-46  346.1  22.3  248   16-307    11-262 (279)
224 1u46_A ACK-1, activated CDC42  100.0 6.9E-42 2.3E-46  350.3  19.6  260   11-307    11-277 (291)
225 1opk_A P150, C-ABL, proto-onco 100.0 8.5E-42 2.9E-46  378.7  21.8  250   16-307   218-471 (495)
226 1k9a_A Carboxyl-terminal SRC k 100.0 4.1E-41 1.4E-45  368.7  25.4  245   15-307   190-438 (450)
227 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-41   4E-46  355.1  20.0  269   17-307    29-303 (318)
228 4eut_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46  370.0  16.9  273   15-308     6-303 (396)
229 3uim_A Brassinosteroid insensi 100.0 3.4E-42 1.2E-46  359.3  15.6  271   14-313    26-310 (326)
230 4fl3_A Tyrosine-protein kinase 100.0 4.1E-41 1.4E-45  383.9  25.1  250   20-307   370-624 (635)
231 1qcf_A Haematopoetic cell kina 100.0 2.1E-41 7.1E-46  371.4  21.2  248   16-307   186-437 (454)
232 3g2f_A Bone morphogenetic prot 100.0 1.3E-41 4.6E-46  356.0  17.9  281   15-313    10-323 (336)
233 2nru_A Interleukin-1 receptor- 100.0 3.4E-41 1.2E-45  348.5  20.0  268   14-308    27-300 (307)
234 2eva_A TAK1 kinase - TAB1 chim 100.0 8.1E-41 2.8E-45  347.3  22.8  244   16-308     6-257 (307)
235 3c1x_A Hepatocyte growth facto 100.0 3.5E-41 1.2E-45  360.7  20.5  254   18-308    89-349 (373)
236 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-41 1.2E-45  358.3  20.3  246   16-309    63-333 (365)
237 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-40   5E-45  347.8  23.3  271   16-307    39-315 (326)
238 3sv0_A Casein kinase I-like; t 100.0 1.1E-40 3.7E-45  368.5  23.4  259   16-307     5-271 (483)
239 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-40   4E-45  365.3  22.9  248   16-307   182-433 (452)
240 3mdy_A Bone morphogenetic prot 100.0 6.8E-41 2.3E-45  350.1  19.5  266   11-308    30-325 (337)
241 2ozo_A Tyrosine-protein kinase 100.0 3.2E-40 1.1E-44  375.2  25.1  252   17-307   334-591 (613)
242 3qa8_A MGC80376 protein; kinas 100.0 6.5E-42 2.2E-46  388.7  10.9  284   17-315    13-305 (676)
243 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-40 5.4E-45  372.0  19.8  250   15-308   264-517 (535)
244 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-40 3.8E-45  346.2  15.7  255   15-307    30-295 (319)
245 2vuw_A Serine/threonine-protei 100.0 2.2E-42 7.5E-47  363.1   2.0  258   12-312    14-336 (336)
246 1b6c_B TGF-B superfamily recep 100.0 5.2E-40 1.8E-44  344.5  19.8  261   17-308    41-330 (342)
247 2j0j_A Focal adhesion kinase 1 100.0 2.3E-39 7.7E-44  370.9  25.2  250   17-307   389-644 (656)
248 3gxj_A TGF-beta receptor type- 100.0   1E-41 3.5E-46  350.7   1.6  261   17-307     2-290 (303)
249 3uqc_A Probable conserved tran 100.0 4.9E-39 1.7E-43  331.4  20.3  229   16-308    29-259 (286)
250 2pzi_A Probable serine/threoni 100.0 1.7E-39 5.8E-44  373.7  15.9  246   17-313    79-326 (681)
251 4azs_A Methyltransferase WBDD; 100.0 3.2E-33 1.1E-37  314.7   5.2  187   25-225   241-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.6E-27 5.6E-32  266.7   6.5  187   21-226   339-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 3.3E-24 1.1E-28  220.5   9.5  160   18-211    90-274 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.5E-20 5.2E-25  190.4  12.8  140   18-171    47-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 1.2E-16 4.1E-21  170.3  11.7  138   19-170    96-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 1.9E-11 6.4E-16  122.8  11.2  137   19-169    15-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 2.4E-10 8.1E-15  113.7  11.5  134   17-169    19-213 (264)
258 3sg8_A APH(2'')-ID; antibiotic  99.1 1.3E-10 4.5E-15  119.6   9.6  184   23-226    25-287 (304)
259 3dxp_A Putative acyl-COA dehyd  99.0   7E-10 2.4E-14  116.8  11.6  144   20-170    40-248 (359)
260 3r70_A Aminoglycoside phosphot  98.8 3.3E-08 1.1E-12  102.5  11.8  133   19-171    38-238 (320)
261 3tdw_A Gentamicin resistance p  98.5 1.5E-06   5E-11   89.6  15.4  133   23-170    24-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.4 2.3E-06 7.8E-11   85.7  13.8  133   24-170    30-223 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.2 8.3E-06 2.8E-10   86.1  12.7   74   20-106    43-118 (362)
264 2olc_A MTR kinase, methylthior  98.2 6.1E-06 2.1E-10   87.8  11.2   78   22-106    34-119 (397)
265 2q83_A YTAA protein; 2635576,   98.1 1.3E-05 4.4E-10   82.6  10.5   30  140-169   222-251 (346)
266 3d1u_A Putative fructosamine-3  98.0 4.6E-05 1.6E-09   77.8  12.2   75   20-106    17-94  (288)
267 3ats_A Putative uncharacterize  97.8 1.3E-05 4.5E-10   83.7   4.5   85   20-106    22-117 (357)
268 2pyw_A Uncharacterized protein  97.5 0.00057 1.9E-08   73.2  12.5   32  138-170   230-261 (420)
269 3dxq_A Choline/ethanolamine ki  97.4 0.00036 1.2E-08   71.1   9.2   68   23-106    23-92  (301)
270 2ppq_A HSK, HK, homoserine kin  97.2  0.0023 7.9E-08   65.4  12.5  150   12-169    17-216 (322)
271 3jr1_A Putative fructosamine-3  97.1  0.0024 8.3E-08   65.8  10.8   74   21-106    39-115 (312)
272 3f7w_A Putative fructosamine-3  97.0  0.0066 2.2E-07   61.2  13.3   76   18-105    15-93  (288)
273 2yle_A Protein spire homolog 1  97.0  0.0069 2.4E-07   58.8  12.3   96  107-221    34-131 (229)
274 3csv_A Aminoglycoside phosphot  96.9  0.0029   1E-07   65.1  10.3   32  139-170   182-217 (333)
275 1nw1_A Choline kinase (49.2 KD  96.7  0.0087   3E-07   64.3  12.5   72   22-106    77-156 (429)
276 1zyl_A Hypothetical protein YI  96.7  0.0058   2E-07   62.5  10.4  137   24-169    32-222 (328)
277 3c5i_A Choline kinase; choline  96.7  0.0033 1.1E-07   65.8   8.6   73   22-106    37-118 (369)
278 3feg_A Choline/ethanolamine ki  96.6   0.011 3.7E-07   62.6  12.0  138   19-169    52-253 (379)
279 2qg7_A Ethanolamine kinase PV0  96.4    0.06   2E-06   58.3  16.4   72   23-106   113-185 (458)
280 3i1a_A Spectinomycin phosphotr  96.4   0.012 4.2E-07   61.0  10.5   31  140-170   206-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  96.2   0.022 7.4E-07   60.7  10.9  142   18-169    53-279 (401)
282 3g15_A CK, chetk-alpha, cholin  94.1    0.25 8.5E-06   52.3  11.4   29  142-170   246-280 (401)
283 3mes_A Choline kinase; malaria  93.3       1 3.6E-05   48.0  14.4   73   22-106    74-154 (424)
284 3cxl_A N-chimerin; SH2, RHO-GA  78.0    0.15 5.1E-06   55.3  -3.8   62   22-86    146-213 (463)
285 4ano_A ESSB; membrane protein,  68.7     9.7 0.00033   36.6   6.9   82   75-168    48-131 (219)
286 4ann_A ESSB; membrane protein,  64.0       5 0.00017   38.5   3.9   89   67-168    36-126 (215)
287 3eps_A Isocitrate dehydrogenas  51.9      40  0.0014   36.6   8.6  133   25-171   313-482 (578)
288 2x6h_A GH13170P, VPS34, phosph  40.0 2.3E+02  0.0079   31.8  12.8   45  121-169   529-575 (696)
289 3dcg_E Virion infectivity fact  34.2     6.7 0.00023   26.6  -0.5   10  598-607     1-10  (39)
290 3ls8_A Phosphatidylinositol 3-  23.6 7.6E+02   0.026   27.1  15.6   46  120-169   454-501 (614)

No 1  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.1e-67  Score=564.46  Aligned_cols=340  Identities=49%  Similarity=0.878  Sum_probs=299.4

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC-CCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP-SRR   92 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~-~~~   92 (614)
                      +...++|++++.||+|+||+||+|+++.+|+.||||++++.........++++|+.+|+.|+|||||++++++... .+.
T Consensus        50 ~~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG  129 (398)
T ss_dssp             CCCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT
T ss_pred             CCCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccc
Confidence            4556799999999999999999999999999999999987766777788899999999999999999999998654 345


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +.+.+|||||||+|+|.++|..++.+++.+++.|++||+.||.|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus       130 ~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          130 EFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             TCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             cCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            66789999999999999999999999999999999999999999999999999999999999999999999999998654


Q ss_pred             CCC-CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDT-PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~-~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ... ......++++||++|||||++.+. ..|+.++||||||||+|||++|++||.+.+..+++..|....|.|+...+.
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~-~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~  288 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ  288 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred             cCccccccccccceeChHhcCHHHhcCC-CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            322 122334678999999999998763 467999999999999999999999999999999999999999999999988


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchh
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEF  331 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~  331 (614)
                      .........++..+....+.++...+++++++++|||.+||++||.+|||++|+|+||||+.+.....++.+.+  .+++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~~p~~~~--~~~~  366 (398)
T 4b99_A          289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP--PFDF  366 (398)
T ss_dssp             -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGGSCCCSS--CCCC
T ss_pred             hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCccccCCCC--CCCC
Confidence            88888888888888888888888889999999999999999999999999999999999999888777776554  3456


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHhCc
Q 007177          332 EFERRRVTKEDIRELIFREILEYHP  356 (614)
Q Consensus       332 ~~e~~~~~~e~~~~~~~~ei~~~~~  356 (614)
                      .++...++.+++++.+++|+.++|.
T Consensus       367 ~~~~~~~~~~~~k~~i~~ei~~~~~  391 (398)
T 4b99_A          367 AFDREALTRERIKEAIVAEIEDFHA  391 (398)
T ss_dssp             HHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhcCHHHHHHHHHHHHHHHHH
Confidence            7778889999999999999998875


No 2  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=3.1e-60  Score=501.30  Aligned_cols=257  Identities=28%  Similarity=0.495  Sum_probs=222.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      .+|++++.||+|+||+||+|+++.+|+.||||+++....  .....+.+|+.+|+.|+|||||++++++     .+.+.+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~  146 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDEL  146 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEE
Confidence            569999999999999999999999999999999974322  2345678999999999999999999999     455779


Q ss_pred             EEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCC
Q 007177           98 YVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP  176 (614)
Q Consensus        98 ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~  176 (614)
                      |||||||+ |+|.+++.. +.+++++++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.......
T Consensus       147 ~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          147 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             EEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             EEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence            99999999 599998876 4699999999999999999999999999999999999999999999999999987643322


Q ss_pred             CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhch
Q 007177          177 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND  256 (614)
Q Consensus       177 ~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~  256 (614)
                         ..+..+||++|||||++.+  ..|+.++||||||||+|||++|++||.+.+..+.+..|....              
T Consensus       226 ---~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--------------  286 (346)
T 4fih_A          226 ---RRKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--------------  286 (346)
T ss_dssp             ---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS--------------
T ss_pred             ---cccccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC--------------
Confidence               2356799999999999987  689999999999999999999999999988777766553211              


Q ss_pred             hHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          257 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                    .+....+..+|+++++||.+||+.||++|||++|+|+||||+...
T Consensus       287 --------------~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          287 --------------PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             --------------CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             --------------CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence                          111123456899999999999999999999999999999998643


No 3  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=2.7e-60  Score=494.77  Aligned_cols=259  Identities=27%  Similarity=0.464  Sum_probs=225.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.. ........+.+|+++|+.|+|||||++++++     ++.+
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence            457999999999999999999999999999999997432 1223356789999999999999999999999     5667


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      .+|||||||+ |+|.++|+..+.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            8999999999 599999999889999999999999999999999999999999999999999999999999999876433


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      .. .....+.+||+.|||||++.+  ..|+.++||||||||||+|++|++||.+.+..+.+..|...             
T Consensus       186 ~~-~~~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-------------  249 (311)
T 4aw0_A          186 SK-QARANSFVGTAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-------------  249 (311)
T ss_dssp             TT-CCCBCCCCSCGGGCCHHHHHH--SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-------------
T ss_pred             CC-cccccCcccCcccCCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------
Confidence            22 223456799999999999987  68999999999999999999999999998877666665321             


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH------HHcCcccccC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE------ALADPYFKGL  314 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e------iL~hp~f~~~  314 (614)
                                     ...   ....+++++++||.+||+.||++|||++|      +++||||+++
T Consensus       250 ---------------~~~---~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          250 ---------------EYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             ---------------CCC---CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             ---------------CCC---CCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence                           111   12357899999999999999999999987      5899999876


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.7e-60  Score=501.40  Aligned_cols=259  Identities=25%  Similarity=0.447  Sum_probs=221.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|+.|+|||||++++++     .+.
T Consensus        21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~   95 (350)
T 4b9d_A           21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EEN   95 (350)
T ss_dssp             SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EET
T ss_pred             CcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EEC
Confidence            345799999999999999999999999999999999987656666778899999999999999999999999     456


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      +.+|||||||+ |+|.++|...+  .+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+..
T Consensus        96 ~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A           96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            78999999998 59999997643  5799999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ...   ....+..+||++|||||++.+  ..|+.++||||||||||||++|++||.+.+..+.+..|...          
T Consensus       176 ~~~---~~~~~~~~GT~~YmAPE~l~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----------  240 (350)
T 4b9d_A          176 NST---VELARACIGTPYYLSPEICEN--KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG----------  240 (350)
T ss_dssp             CHH---HHHHHHHHSCCTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----------
T ss_pred             cCC---cccccccCCCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC----------
Confidence            321   112345789999999999987  68999999999999999999999999999877776655321          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                          .+...+..+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       241 --------------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          241 --------------------SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             --------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             --------------------CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                                011234568999999999999999999999999999999974


No 5  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-59  Score=482.90  Aligned_cols=255  Identities=31%  Similarity=0.536  Sum_probs=207.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC-hHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH-ISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||+||+|.++.+|+.||||++++.... .....++.+|+.+|+.|+|||||++++++     .+.+
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~   86 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD   86 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECC
Confidence            46899999999999999999999999999999999754322 23356788999999999999999999999     5567


Q ss_pred             cEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           96 DIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      .+|||||||+|+|.+.+..++.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus        87 ~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999998654322


Q ss_pred             CCccccccccCCccccCcccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~~~~y-~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                          ...+.+||+.|||||++.+  ..| +.++|||||||++|+|++|++||.+.+....+..|...             
T Consensus       167 ----~~~~~~GT~~Y~APE~~~~--~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~-------------  227 (275)
T 3hyh_A          167 ----FLKTSCGSPNYAAPEVISG--KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-------------  227 (275)
T ss_dssp             ------------CTTSCHHHHSS--SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-------------
T ss_pred             ----ccCCeeECcccCChhhhcC--CCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-------------
Confidence                2345789999999999987  454 68999999999999999999999988765555444220             


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                     ..   .....+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       228 ---------------~~---~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          228 ---------------VY---TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             ---------------CC---CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             ---------------CC---CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                           11   112457899999999999999999999999999999973


No 6  
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.8e-58  Score=502.26  Aligned_cols=350  Identities=37%  Similarity=0.691  Sum_probs=300.8

Q ss_pred             ccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEec
Q 007177            8 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIML   87 (614)
Q Consensus         8 ~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~   87 (614)
                      -+.+..+...++|++++.||+|+||.||+|.++.+++.||||++...........++.+|+.+|+.++||||+++++++.
T Consensus        16 ~Q~~~~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~   95 (432)
T 3n9x_A           16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII   95 (432)
T ss_dssp             TTCGGGCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             hcCCCcceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence            44567778889999999999999999999999999999999999887777788889999999999999999999999997


Q ss_pred             CCCCCCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           88 PPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      .........+|+|||||+++|.+++.....+++.+++.|++||+.||+|||+.||+||||||+|||++.++.+||+|||+
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A           96 PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cCCCCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence            76655667899999999999999999988899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCC-------------------ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-------
Q 007177          168 ARVAFNDTPT-------------------TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-------  221 (614)
Q Consensus       168 a~~~~~~~~~-------------------~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-------  221 (614)
                      ++........                   ....+.++||++|+|||++... ..|+.++||||||||+|||++       
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~  254 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ-ENYTKSIDIWSTGCIFAELLNMLQSHIN  254 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcC-CCCCcccccchHHHHHHHHHhccccccc
Confidence            9875433221                   0234678999999999986442 579999999999999999997       


Q ss_pred             ----CCCCCCCCC-----------------hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCC
Q 007177          222 ----GKPLFPGKN-----------------VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA  280 (614)
Q Consensus       222 ----G~~pF~g~~-----------------~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  280 (614)
                          |.++|++.+                 ..+++..|.+.+|.|..+.+..+.......++..+....+..+...++.+
T Consensus       255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (432)
T 3n9x_A          255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI  334 (432)
T ss_dssp             SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred             ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence                677787765                 47899999999999999999999999999999988888888888889999


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhHHHhhcCCHHHHHHHHHHHHHHhCchhh
Q 007177          281 DPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHPQLL  359 (614)
Q Consensus       281 s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~~~~~  359 (614)
                      ++.+.+||.+||++||++|||++|+|+||||+++.....++.+.......|+ +...++.+++++.+++|+..++|+..
T Consensus       335 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~  412 (432)
T 3n9x_A          335 SDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFD-DWMVLSETQLRYIFLKEVQSFHPELV  412 (432)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC---CCCCCCSSC-TTCCCCHHHHHHHHHHHHHHHCTTCC
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccCcCCCCCCCCChh-hcccCCHHHHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999998876666544322222222 22568899999999999999999754


No 7  
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.2e-58  Score=508.07  Aligned_cols=347  Identities=40%  Similarity=0.738  Sum_probs=288.3

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ..+...++|++++.||+|+||+||+|.++.+++.||||++...........++.+|+.+|+.|+||||+++++++.....
T Consensus        47 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  126 (458)
T 3rp9_A           47 SDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV  126 (458)
T ss_dssp             SSCCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             CcCccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc
Confidence            34566789999999999999999999999999999999998777777788899999999999999999999999977766


Q ss_pred             CCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           92 RDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        92 ~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ++...+|+|||||+++|.+++.....+++.+++.|++||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       127 ~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          127 EKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             TTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             ccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence            67788999999999999999999889999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCC------------------------ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh------
Q 007177          172 FNDTPT------------------------TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT------  221 (614)
Q Consensus       172 ~~~~~~------------------------~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt------  221 (614)
                      ......                        ....+.++||++|+|||++... ..|+.++||||||||||||++      
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCC-CCCCcHhHHHHHHHHHHHHHHhccccc
Confidence            432211                        1234667899999999986432 579999999999999999998      


Q ss_pred             -----CCCCCCCCC--------------------hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCC
Q 007177          222 -----GKPLFPGKN--------------------VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK  276 (614)
Q Consensus       222 -----G~~pF~g~~--------------------~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~  276 (614)
                           |.++|+|.+                    ..+++..|.+.+|.|..+.+..+.......++..+.......+...
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER  365 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence                 889998876                    3789999999999999999999999999999998888888888999


Q ss_pred             CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhHHHhhcCCHHHHHHHHHHHHHHhCc
Q 007177          277 FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP  356 (614)
Q Consensus       277 ~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~~  356 (614)
                      ++.+++++.+||.+||.+||++|||++|+|+||||+++.....++.........|+ +...++.+++++.+++|+..|++
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~  444 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFN-DWMNMDEPQLRYAFVKEIQRYHP  444 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGGCCCCSSCCCCSSC-TTSCCCHHHHHHHHHHHHTTTCT
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCccCCCCCCCCCCCcc-ccccCCHHHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999998776655544322222222 23467899999999999999998


Q ss_pred             hhhh
Q 007177          357 QLLK  360 (614)
Q Consensus       357 ~~~~  360 (614)
                      ....
T Consensus       445 ~~~~  448 (458)
T 3rp9_A          445 EIQL  448 (458)
T ss_dssp             TCCC
T ss_pred             cccC
Confidence            7543


No 8  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=6.4e-59  Score=503.00  Aligned_cols=258  Identities=28%  Similarity=0.488  Sum_probs=223.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|+++.+|+.||||++....  ......+.+|+.+|+.|+|||||++++++     .+.+.
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~  222 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDE  222 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCE
Confidence            357999999999999999999999999999999997532  23345688999999999999999999999     45567


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      +|||||||+ |+|.++++.. .+++.+++.|++||+.||.|||++|||||||||+||||+.+|.+||+|||+|+......
T Consensus       223 ~~iVmEy~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             EEEEEeCCCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            999999999 5999998764 69999999999999999999999999999999999999999999999999998764332


Q ss_pred             CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhc
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN  255 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~  255 (614)
                      .   ..+..+||++|||||++.+  ..|+.++||||||||+|||++|++||.+.+..+.+..|....             
T Consensus       302 ~---~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-------------  363 (423)
T 4fie_A          302 P---RRKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------------  363 (423)
T ss_dssp             C---CBCCCEECTTTCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-------------
T ss_pred             c---cccccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-------------
Confidence            2   2356799999999999987  689999999999999999999999999988777766553210             


Q ss_pred             hhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          256 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       256 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                     .+....+..+|+++++||.+||+.||++|||++|+|+||||+...
T Consensus       364 ---------------~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          364 ---------------PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             ---------------CCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             ---------------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence                           111233567899999999999999999999999999999998643


No 9  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.5e-58  Score=478.17  Aligned_cols=261  Identities=26%  Similarity=0.375  Sum_probs=219.4

Q ss_pred             CCCCe-EEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRY-KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY-~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..+|| ++.+.||+|+||+||+|.++.++..||||++...........++.+|+.+|+.|+|||||++++++.... ...
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~  101 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGK  101 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTE
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCC
Confidence            34566 7888999999999999999999999999999866566667788999999999999999999999985322 234


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEECC-CCcEEEeecCcccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILANA-NCKLKICDFGLARV  170 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~~-~~~vKL~DFGla~~  170 (614)
                      ..+|||||||+ |+|.+++...+.+++..++.|+.||+.||.|||++|  |+||||||+|||++. ++.+||+|||+|+.
T Consensus       102 ~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             cEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence            56899999999 699999999889999999999999999999999999  999999999999985 78999999999985


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ....     .....+||+.|||||++.+   .|+.++|||||||+||||++|++||.+.+...++......         
T Consensus       182 ~~~~-----~~~~~~GTp~YmAPE~~~~---~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~---------  244 (290)
T 3fpq_A          182 KRAS-----FAKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS---------  244 (290)
T ss_dssp             CCTT-----SBEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT---------
T ss_pred             CCCC-----ccCCcccCccccCHHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc---------
Confidence            4322     2346799999999999864   6999999999999999999999999876654443322110         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                      ...+   .......++++++||.+||+.||++|||++|+|+||||++
T Consensus       245 ----------------~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          245 ----------------GVKP---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------------TCCC---GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------------CCCC---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                            0011   1112346789999999999999999999999999999974


No 10 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=2.4e-59  Score=486.88  Aligned_cols=259  Identities=27%  Similarity=0.446  Sum_probs=216.5

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEEC---CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~---~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .+.++|++++.||+|+||+||+|++.   .+++.||||++++......+..++.+|+.+|+.|+|||||++++++     
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----   95 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----   95 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----
Confidence            34578999999999999999999884   4678999999975433333344678899999999999999999999     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+.+.+|||||||+ |+|.++|...+.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus        96 ~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A           96 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            45678999999999 69999999988999999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......   .....+||+.|||||++.+  ..|+.++|||||||++|||++|++||.+.+..+.+..|...         
T Consensus       176 ~~~~~~---~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~---------  241 (304)
T 3ubd_A          176 SIDHEK---KAYSFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA---------  241 (304)
T ss_dssp             -----C---CCCSCCCCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---------
T ss_pred             ccCCCc---cccccccCcccCCHHHhcc--CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC---------
Confidence            433222   2345789999999999987  68999999999999999999999999998877766665321         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-----HHHHHcCcccccC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-----AEEALADPYFKGL  314 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-----a~eiL~hp~f~~~  314 (614)
                                         ..   .....+|+++++||.+||+.||++|||     ++|+|+||||+++
T Consensus       242 -------------------~~---~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          242 -------------------KL---GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             -------------------CC---CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -------------------CC---CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence                               01   112457899999999999999999998     5899999999875


No 11 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-56  Score=478.29  Aligned_cols=334  Identities=40%  Similarity=0.756  Sum_probs=285.1

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC-CC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS-RR   92 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~-~~   92 (614)
                      +...++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.... ..
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  100 (367)
T 1cm8_A           21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD  100 (367)
T ss_dssp             ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred             eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence            45668999999999999999999999999999999999876666677788999999999999999999999996652 23


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +...+|+|||||+++|.+++.. ..+++.+++.+++||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          101 DFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             TCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            4567899999998899999977 569999999999999999999999999999999999999999999999999998753


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..      .+.+++|++|+|||++.+. ..|+.++||||||||+|+|++|++||.+.+..+++..|...+|.|..+.+..
T Consensus       180 ~~------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  252 (367)
T 1cm8_A          180 SE------MTGYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR  252 (367)
T ss_dssp             SS------CCSSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             cc------cCcCcCCCCcCCHHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            22      2456899999999998753 5799999999999999999999999999999999999999999999999999


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhH
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFE  332 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~  332 (614)
                      +.......++..+.......+...++.+++.+.+||.+||.+||.+|||++|+|+||||+.+...+.++...+   +++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~---~~~~  329 (367)
T 1cm8_A          253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQK---YDDS  329 (367)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CCCC---CCCC
T ss_pred             hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCccCCCCCC---CCCC
Confidence            9999999999988888888888889999999999999999999999999999999999999988777766553   4556


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHhCchh
Q 007177          333 FERRRVTKEDIRELIFREILEYHPQL  358 (614)
Q Consensus       333 ~e~~~~~~e~~~~~~~~ei~~~~~~~  358 (614)
                      ++....+.+++++.+++|++.++++.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (367)
T 1cm8_A          330 FDDVDRTLDEWKRVTYKEVLSFKPPR  355 (367)
T ss_dssp             -----CCHHHHHHHHHHHHHTCCC--
T ss_pred             hhhhcCCHHHHHHHHHHHHHHhcccc
Confidence            67778889999999999999998863


No 12 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=8.7e-58  Score=481.04  Aligned_cols=258  Identities=25%  Similarity=0.346  Sum_probs=217.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||+++....       ..+|+.+|+.|+|||||++++++     .+...
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~-----~~~~~  124 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAV-----REGPW  124 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEE-----EETTE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEE-----EECCE
Confidence            4579999999999999999999999999999999975321       24799999999999999999998     45577


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC-cEEEeecCccccccCC
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFND  174 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~-~vKL~DFGla~~~~~~  174 (614)
                      +|||||||+ |+|.++|+..+.+++.+++.|+.||+.||.|||++|||||||||+||||+.+| ++||+|||+|+....+
T Consensus       125 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            999999999 59999999988999999999999999999999999999999999999999987 6999999999876543


Q ss_pred             CCCc--cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          175 TPTT--IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       175 ~~~~--~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....  ......+||+.|||||++.+  ..|+.++||||||||||||++|++||.+.+..+.+..|..            
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~------------  270 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMG--KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS------------  270 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH------------
T ss_pred             CcccceecCCccccCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc------------
Confidence            2211  11234689999999999987  6899999999999999999999999988776554444422            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHH-------------HcCcccccCCc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA-------------LADPYFKGLSK  316 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~ei-------------L~hp~f~~~~~  316 (614)
                                      .+.++...++.+++.+.+||.+||+.||.+|||+.|+             |+|||+..+.+
T Consensus       271 ----------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          271 ----------------EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             ----------------SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             ----------------CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence                            1223334567899999999999999999999999997             57999987643


No 13 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.6e-56  Score=480.69  Aligned_cols=339  Identities=39%  Similarity=0.744  Sum_probs=273.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||++...........++.+|+.+|+.+. ||||+++++++...   +..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~~~   84 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---NDR   84 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---TSS
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---CCC
Confidence            36899999999999999999999999999999999877777788889999999999997 99999999998542   345


Q ss_pred             cEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           96 DIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      .+|+|||||+++|.+++... .+++.+++.+++||+.||+|||+.||+||||||+|||++.++.+||+|||+|+......
T Consensus        85 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           85 DVYLVFDYMETDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             CEEEEEECCSEEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEEEecccCcCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            79999999999999999874 69999999999999999999999999999999999999999999999999998653211


Q ss_pred             ------------------CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 007177          176 ------------------PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL  237 (614)
Q Consensus       176 ------------------~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~  237 (614)
                                        ......+.++||++|+|||++.+. ..|+.++||||||||+|||++|++||++.+..+++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  242 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS-TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER  242 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                              112234567999999999998753 5789999999999999999999999999999999999


Q ss_pred             HHhhhCCCchhhhhhhhchhHHHHHHhhcccC---CCcccCCC-------------CCCCHHHHHHHHHhcCCCCCCCCC
Q 007177          238 MTDLLGTPSLDTISRVRNDKARRYLTSMRKKQ---PVQFSQKF-------------PNADPSALRLLERLLAFDPKDRPT  301 (614)
Q Consensus       238 i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~---~~~~~~~~-------------~~~s~~l~dLI~~mL~~DP~~Rps  301 (614)
                      |...++.|..+.+..+.......++..+....   ...+...+             ..+++.+.+||.+||++||.+|||
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t  322 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS  322 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence            99999999999988877777666666554433   22222222             278899999999999999999999


Q ss_pred             HHHHHcCcccccCCcccCCCCCCCCccchhHHHhhcCCHHHHHHHHHHHHHHhCchhhhh
Q 007177          302 AEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHPQLLKD  361 (614)
Q Consensus       302 a~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~~~~~~~  361 (614)
                      ++|+|+||||+.+.....++.+.......+. +....+.+++++.+++++.+++++...+
T Consensus       323 ~~e~l~Hp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (388)
T 3oz6_A          323 ANDALKHPFVSIFHNPNEEPNCDHIITIPIN-DNVKHSIDDYRNLVYSEISRRKRELISN  381 (388)
T ss_dssp             HHHHTTSTTTTTTCCGGGCCCCSSCCCCC-------CCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHhCCHHHHHhcCCccCCCCCCCCCCCcc-ccccCCHHHHHHHHHHHHHHhhhhhhhh
Confidence            9999999999999887777776554333332 2346788999999999999988876543


No 14 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=7.3e-57  Score=480.18  Aligned_cols=285  Identities=27%  Similarity=0.451  Sum_probs=224.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEC---CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~---~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~   92 (614)
                      .++|++++.||+|+||+||+|.++   .+++.||||++...    ....++.+|+++|+.+ +||||+++++++     +
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~   90 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCF-----R   90 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEE-----E
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEE-----E
Confidence            468999999999999999999875   46789999998653    2345678999999998 699999999999     4


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC-CcEEEeecCcccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARV  170 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~-~~vKL~DFGla~~  170 (614)
                      +.+.+|||||||+ ++|.++++   .+++.+++.|++||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            5678999999998 69999984   59999999999999999999999999999999999999877 7999999999976


Q ss_pred             ccCCCCC-------------------------ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCC
Q 007177          171 AFNDTPT-------------------------TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL  225 (614)
Q Consensus       171 ~~~~~~~-------------------------~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~p  225 (614)
                      .......                         ....+..+||++|+|||++.+. ..|+.++||||+|||+|||++|++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC-PNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCCccchhhhHHHHHHHHHCCCC
Confidence            4332110                         1123456899999999998762 4689999999999999999999988


Q ss_pred             C-CCCChhHHHHHHHhhhCCCchhhhhhhhc-----------hhHHHHHHhhccc------------CCCcccCCCCCCC
Q 007177          226 F-PGKNVVHQLDLMTDLLGTPSLDTISRVRN-----------DKARRYLTSMRKK------------QPVQFSQKFPNAD  281 (614)
Q Consensus       226 F-~g~~~~~~l~~i~~~~g~p~~~~i~~~~~-----------~~~~~~l~~~~~~------------~~~~~~~~~~~~s  281 (614)
                      | .+.++.+++..|...+|++..........           .........+...            ........|..+|
T Consensus       247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is  326 (361)
T 4f9c_A          247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP  326 (361)
T ss_dssp             SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred             CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence            7 66788999999999999765443322110           1111111111100            0111224567899


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          282 PSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       282 ~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      ++++|||.+||++||++|+|++|+|+||||+++
T Consensus       327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999999999999999876


No 15 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.6e-56  Score=476.87  Aligned_cols=334  Identities=41%  Similarity=0.799  Sum_probs=281.8

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC-CCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP-SRR   92 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~-~~~   92 (614)
                      +...++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++... ...
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  104 (367)
T 2fst_X           25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE  104 (367)
T ss_dssp             EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence            4456899999999999999999999999999999999987666677788899999999999999999999998654 223


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +...+|+|||+++++|.+++.. ..+++..++.+++||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       105 ~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          105 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             GCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             cCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            4567899999999999998876 569999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..      .+.++||++|+|||++.+. ..|+.++||||||||+|+|++|++||.+.+..+++..|...+|.|..+.+..
T Consensus       184 ~~------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  256 (367)
T 2fst_X          184 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  256 (367)
T ss_dssp             -------------CCCTTCCHHHHTTC-CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             cc------CCCcCcCcCccChHHHcCC-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            22      2456899999999998753 5789999999999999999999999999999999999999999999999999


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhH
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFE  332 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~  332 (614)
                      +.......++..+.......+...++..++.+.+||.+||++||.+|||++|+|+||||+.+.....++...+   +++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~~---~~~~  333 (367)
T 2fst_X          257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADP---YDQS  333 (367)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGCCCCCC---CCGG
T ss_pred             hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCCCCCCC---CCcc
Confidence            9998899999888877777888888999999999999999999999999999999999999888777766554   4566


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHhCchh
Q 007177          333 FERRRVTKEDIRELIFREILEYHPQL  358 (614)
Q Consensus       333 ~e~~~~~~e~~~~~~~~ei~~~~~~~  358 (614)
                      ++......+++++++++|+..++|..
T Consensus       334 ~~~~~~~~~~~~~~~~~e~~~~~~~~  359 (367)
T 2fst_X          334 LESRDLLIDEWKSLTYDEVISFVPPP  359 (367)
T ss_dssp             GSSCCCCHHHHHHHHHHHHHHCCCCC
T ss_pred             hhhccCCHHHHHHHHHHHHHHhccCc
Confidence            67778899999999999999998874


No 16 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=3.7e-55  Score=482.26  Aligned_cols=331  Identities=35%  Similarity=0.667  Sum_probs=265.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC-CCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR-RDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~-~~~   94 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++..... .+.
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            3579999999999999999999999999999999998776677778889999999999999999999999966532 455


Q ss_pred             CcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           95 KDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..+|||||||+++|.+.+..  .+++.+++.|++||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus       140 ~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          140 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             CEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred             CeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence            78999999999999988854  4999999999999999999999999999999999999999999999999999865432


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      .    ..+.++||++|+|||++.+  ..|+.++||||||||+|||++|++||.+.+..+++..|...+|.|..+.+..+.
T Consensus       218 ~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~  291 (464)
T 3ttj_A          218 F----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  291 (464)
T ss_dssp             C----CC----CCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred             c----ccCCCcccccccCHHHHcC--CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence            2    2356789999999999987  689999999999999999999999999999999999999999999998887764


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCC------------CHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNA------------DPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS  322 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~------------s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~  322 (614)
                       .....++..........+...++..            ++++++||.+||.+||++|||++|+|+||||+.+........
T Consensus       292 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~~~~  370 (464)
T 3ttj_A          292 -PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA  370 (464)
T ss_dssp             -HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHHHSC
T ss_pred             -hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCcccccC
Confidence             4455555544444444444444332            578999999999999999999999999999998765433221


Q ss_pred             CCCCccchhHHHhhcCCHHHHHHHHHHHHHHhCc
Q 007177          323 CQPISKMEFEFERRRVTKEDIRELIFREILEYHP  356 (614)
Q Consensus       323 ~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~~  356 (614)
                      . +....++.++....+.+++++.+++|+..++.
T Consensus       371 ~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  403 (464)
T 3ttj_A          371 P-PPQIYDKQLDEREHTIEEWKELIYKEVMNSEE  403 (464)
T ss_dssp             C-C-----------CCCHHHHHHHHHHHHHC---
T ss_pred             C-CCccCCcchhhccCCHHHHHHHHHHHHHHhhh
Confidence            1 11234556677788899999999999876544


No 17 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=6.6e-54  Score=456.41  Aligned_cols=341  Identities=47%  Similarity=0.830  Sum_probs=291.7

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      .+...++|++++.||+|+||.||+|.+..++..||||++... ........+.+|+.+|+.++||||+++++++......
T Consensus        22 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             BCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred             eccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence            356678999999999999999999999999999999999742 3455667889999999999999999999999776655


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ....+|+||||++++|.++++.. .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~~~iv~e~~~~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          101 QMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccceEEEEEcccCcCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            66789999999999999999764 59999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ............+||++|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...+|.|..+.+..
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  258 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC  258 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTB-CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred             CCCCccccccccccccCCCCCHHhcCC-CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            443333334567899999999987542 4689999999999999999999999999999999999999999999999988


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhH
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFE  332 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~  332 (614)
                      ..+.....+...........+...++++++.+.+||.+||+.||.+|||++|+|+||||+.+.....++....  .+.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~--~~~~~  336 (364)
T 3qyz_A          259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA--PFKFD  336 (364)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGGGSCCCSS--CCCCC
T ss_pred             hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCcccccCCCC--cCCcc
Confidence            8888888888877777777777888899999999999999999999999999999999998866554443322  23444


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHhCchh
Q 007177          333 FERRRVTKEDIRELIFREILEYHPQL  358 (614)
Q Consensus       333 ~e~~~~~~e~~~~~~~~ei~~~~~~~  358 (614)
                      .+...+.++++++++++|...+++..
T Consensus       337 ~~~~~~~~~~~~~~~~~e~~~~~~~~  362 (364)
T 3qyz_A          337 MELDDLPKEKLKELIFEETARFQPGY  362 (364)
T ss_dssp             -----CCHHHHHHHHHHHTGGGCC--
T ss_pred             cccccCCHHHHHHHHHHHHHHhhhhc
Confidence            56667889999999999998888753


No 18 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=9.2e-56  Score=459.88  Aligned_cols=262  Identities=26%  Similarity=0.445  Sum_probs=200.4

Q ss_pred             CeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC-------
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR-------   91 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~-------   91 (614)
                      +|++++.||+|+||+||+|+++.+|+.||||+++.. .......++.+|+.+|+.|+|||||++++++.....       
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP-NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEEC-SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            589999999999999999999999999999999743 234456788999999999999999999999864321       


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDL---TREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~l---se~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      .+...+|||||||+ |+|.+++.....+   .+..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence            12345899999998 6999999876543   4566899999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCc---------cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 007177          168 ARVAFNDTPTT---------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLM  238 (614)
Q Consensus       168 a~~~~~~~~~~---------~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i  238 (614)
                      |+.........         ...+..+||+.|||||++.+  ..|+.++||||||||||||++   ||.+..  +....+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~  237 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRTL  237 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTT--CCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHH
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcC--CCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHH
Confidence            98764432211         12345689999999999987  689999999999999999996   675432  222222


Q ss_pred             HhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          239 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       239 ~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      ......                           .+...++..++.+.+||++||+.||++|||++|+|+||||+++.
T Consensus       238 ~~~~~~---------------------------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          238 TDVRNL---------------------------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHTT---------------------------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHhcC---------------------------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            211110                           11112233467889999999999999999999999999998763


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.2e-53  Score=481.39  Aligned_cols=260  Identities=26%  Similarity=0.425  Sum_probs=227.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||+||+|.++.+|+.||||++..  ....+...+.+|+.+|+.|+|||||++++++     .+...
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~--~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~  228 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNE  228 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEec--cchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCE
Confidence            3689999999999999999999999999999999975  3455667889999999999999999999999     56678


Q ss_pred             EEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC--CcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~--~~vKL~DFGla~~~~  172 (614)
                      +|||||||+ |+|+++|.. .+.|++.+++.|++||+.||.|||++||+||||||+|||++.+  +.+||+|||+|+...
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            999999998 599999864 4679999999999999999999999999999999999999854  899999999998764


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ...    .....+||++|||||++.+  ..|+.++||||||||||||++|.+||.+.+..+.+..|......        
T Consensus       309 ~~~----~~~~~~GT~~y~APEv~~~--~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--------  374 (573)
T 3uto_A          309 PKQ----SVKVTTGTAEFAAPEVAEG--KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--------  374 (573)
T ss_dssp             TTS----EEEEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--------
T ss_pred             CCC----ceeeeEECccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--------
Confidence            322    2356789999999999987  68999999999999999999999999999887777666432111        


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                         .....++.+|+++++||.+||++||.+|||++|+|+||||+....
T Consensus       375 -------------------~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          375 -------------------MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             -------------------CCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             -------------------CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence                               112345678999999999999999999999999999999987544


No 20 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5e-52  Score=443.54  Aligned_cols=330  Identities=41%  Similarity=0.760  Sum_probs=281.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC-CC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR-RD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~-~~   93 (614)
                      ...++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+|+.++||||+++++++..... ..
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            34579999999999999999999999999999999998766666677889999999999999999999999965432 22


Q ss_pred             CCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           94 FKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ...+|+||||+.++|.+.+.  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus       119 ~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          119 FYDFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA  196 (371)
T ss_dssp             CCCCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred             ceeEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence            33459999999999988874  3599999999999999999999999999999999999999999999999999986432


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      .      ....+||++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....|.|..+.+..+
T Consensus       197 ~------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (371)
T 4exu_A          197 E------MTGYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL  269 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred             C------cCCcccCccccCHHHhcCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence            2      2446799999999998753 57899999999999999999999999999999999999999999999998888


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCC-CCCccchhH
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSC-QPISKMEFE  332 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~-~~~~~~~~~  332 (614)
                      .......++..+.......+...++.+++.+.+||.+||+.||.+|||++|+|+||||+.+.....+... +++.   ..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~~~~~---~~  346 (371)
T 4exu_A          270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFD---DS  346 (371)
T ss_dssp             SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCSSCCC---CT
T ss_pred             hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcccccccccCcC---cc
Confidence            8777778887777766667777788899999999999999999999999999999999988665444332 2222   22


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHhCc
Q 007177          333 FERRRVTKEDIRELIFREILEYHP  356 (614)
Q Consensus       333 ~e~~~~~~e~~~~~~~~ei~~~~~  356 (614)
                      .+....+.+++++.+++|+.+|+|
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~  370 (371)
T 4exu_A          347 LEHEKLTVDEWKQHIYKEIVNFSP  370 (371)
T ss_dssp             TSSCCCCHHHHHHHHHHHHHHCCC
T ss_pred             hhhcccchHHHHHHHHHHHHhccc
Confidence            345667889999999999999876


No 21 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=3.1e-53  Score=440.68  Aligned_cols=266  Identities=23%  Similarity=0.344  Sum_probs=217.8

Q ss_pred             ccccccCCCCCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCccee
Q 007177            8 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEI   82 (614)
Q Consensus         8 ~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l   82 (614)
                      ++-|......++|.+.+.||+|+||.||+|.+.     .++..||||+++.  ......+.+.+|+.+|++|+|||||++
T Consensus         3 ~d~~~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l   80 (299)
T 4asz_A            3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKF   80 (299)
T ss_dssp             GGGSCCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             chhhhcccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccE
Confidence            344555555678999999999999999999865     3678899999975  344566789999999999999999999


Q ss_pred             eeEecCCCCCCCCcEEEEEecCC-CcHHHHHHhC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCC
Q 007177           83 KHIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN-------------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLK  148 (614)
Q Consensus        83 ~~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~-------------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLK  148 (614)
                      ++++     .+.+.+|||||||+ |+|.++|...             ..+++.++..|+.||+.||.|||+++|+|||||
T Consensus        81 ~g~~-----~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlK  155 (299)
T 4asz_A           81 YGVC-----VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  155 (299)
T ss_dssp             EEEE-----CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEE-----eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccC
Confidence            9999     44567999999999 6999999764             369999999999999999999999999999999


Q ss_pred             CCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCC
Q 007177          149 PKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP  227 (614)
Q Consensus       149 P~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~  227 (614)
                      |+|||++.++.+||+|||+|+........ ......+||+.|||||++.+  ..|+.++|||||||+||||+| |+.||.
T Consensus       156 p~NILl~~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~--~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~  232 (299)
T 4asz_A          156 TRNCLVGENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWY  232 (299)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCE-EETTTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             HhhEEECCCCcEEECCcccceecCCCCce-eecCceecChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            99999999999999999999865433221 11233569999999999987  689999999999999999998 899999


Q ss_pred             CCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          228 GKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       228 g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      +.+..+.+..+...                           ...   .....+++++.+||.+||+.||++|||++++  
T Consensus       233 ~~~~~~~~~~i~~~---------------------------~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--  280 (299)
T 4asz_A          233 QLSNNEVIECITQG---------------------------RVL---QRPRTCPQEVYELMLGCWQREPHMRKNIKGI--  280 (299)
T ss_dssp             TSCHHHHHHHHHHT---------------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--
T ss_pred             CCCHHHHHHHHHcC---------------------------CCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHH--
Confidence            98876655544321                           001   1224578999999999999999999999999  


Q ss_pred             CcccccCC
Q 007177          308 DPYFKGLS  315 (614)
Q Consensus       308 hp~f~~~~  315 (614)
                      |+||+.+.
T Consensus       281 ~~~L~~~~  288 (299)
T 4asz_A          281 HTLLQNLA  288 (299)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            45776553


No 22 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5.3e-53  Score=477.03  Aligned_cols=260  Identities=25%  Similarity=0.365  Sum_probs=214.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc----CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF----EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~----~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      .++|+++++||+|+||.||+|+++.+|+.||||++++..    ..........+++.+++.++|||||+++++|     +
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~  262 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----H  262 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----E
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----E
Confidence            467999999999999999999999999999999996431    1112222233446677778999999999999     5


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      +...+|||||||. |+|.++|...+.|++..+++|+.||+.||.|||++|||||||||+||||+.+|++||+|||+|+..
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence            6678999999999 599999999899999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....     ....+||+.|||||++.+. ..|+.++||||||||||||++|.+||.+.+..+....+..           
T Consensus       343 ~~~~-----~~t~~GTp~YmAPEvl~~~-~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~-----------  405 (689)
T 3v5w_A          343 SKKK-----PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----------  405 (689)
T ss_dssp             SSCC-----CCSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH-----------
T ss_pred             CCCC-----CCCccCCcCccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-----------
Confidence            4332     2456999999999998641 5799999999999999999999999987543222111100           


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-----HHHHHcCcccccCC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-----AEEALADPYFKGLS  315 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-----a~eiL~hp~f~~~~  315 (614)
                                   ... ...   ..+..+|+++++||.+||+.||.+|++     ++||++||||+++.
T Consensus       406 -------------i~~-~~~---~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          406 -------------TLT-MAV---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             -------------HHH-CCC---CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             -------------hcC-CCC---CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence                         000 011   223568999999999999999999998     89999999999863


No 23 
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.5e-51  Score=434.44  Aligned_cols=337  Identities=43%  Similarity=0.800  Sum_probs=278.2

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      .+...++|++.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+|+.++||||+++++++......
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC
Confidence            345678999999999999999999999999999999999642 3445567788999999999999999999998766556


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +...+|+||||++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        85 ~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           85 NFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             TCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            6688999999999999999976 469999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCCc-------cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCC
Q 007177          173 NDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       173 ~~~~~~-------~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      ......       ......+||+.|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+..+++..+....|.|
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP  242 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSC-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccC-CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            322111       112346899999999987542 578999999999999999999999999999999999999999988


Q ss_pred             chhh-hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCC
Q 007177          246 SLDT-ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ  324 (614)
Q Consensus       246 ~~~~-i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~  324 (614)
                      .... ...........++..+.......+...++.+++.+.+||.+||..||.+|||++|+|+||||+.+.....++...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~~  322 (353)
T 2b9h_A          243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGE  322 (353)
T ss_dssp             CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCCC
T ss_pred             chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcccccccC
Confidence            7443 333344445556555554444555566778999999999999999999999999999999999887766655555


Q ss_pred             CCcc--chhHHHhhcCCHHHHHHHHHHHHH
Q 007177          325 PISK--MEFEFERRRVTKEDIRELIFREIL  352 (614)
Q Consensus       325 ~~~~--~~~~~e~~~~~~e~~~~~~~~ei~  352 (614)
                      ++..  +++......++.+++++++++|+.
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T 2b9h_A          323 PIPPSFFEFDHYKEALTTKDLKKLIWNEIF  352 (353)
T ss_dssp             CCCGGGGGGGCCSSCCCHHHHHHHHHHHHT
T ss_pred             CCCcceeeecchhhcCCHHHHHHHHHHHhh
Confidence            5543  444556667889999999999974


No 24 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.6e-52  Score=436.30  Aligned_cols=259  Identities=23%  Similarity=0.290  Sum_probs=209.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...+++++.+.||+|+||+||+|...   ..||||+++.........+.+.+|+.+|+.|+|||||++++++.      .
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~  103 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------K  103 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------S
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------C
Confidence            34578999999999999999999653   36999999865556667788999999999999999999999873      2


Q ss_pred             CcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +.+|||||||+ |+|.++|... ..+++.++..|+.||+.||.|||++|||||||||+|||+++++.+||+|||+|+...
T Consensus       104 ~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            35799999999 6999999764 579999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .... ....+..+||+.|||||++.+. ...|+.++|||||||+||||++|+.||.+.+....+..+...          
T Consensus       184 ~~~~-~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~----------  252 (307)
T 3omv_A          184 RWSG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR----------  252 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT----------
T ss_pred             cCCc-ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc----------
Confidence            3222 1223456899999999998642 246999999999999999999999999887765554433211          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                     ......+...++++++.+.+||.+||+.||++|||+.|++++
T Consensus       253 ---------------~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          253 ---------------GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             ---------------TCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             ---------------CCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                           111112234456789999999999999999999999988654


No 25 
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=2.1e-51  Score=434.78  Aligned_cols=330  Identities=40%  Similarity=0.755  Sum_probs=280.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC-CCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR-RDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~-~~~   94 (614)
                      ..++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+|+.++||||+++++++..... ...
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            3578999999999999999999999999999999998766666667888999999999999999999999865421 123


Q ss_pred             CcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           95 KDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..+|+||||++++|.+++..  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  179 (353)
T 3coi_A          102 YDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  179 (353)
T ss_dssp             CCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred             eeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence            45699999999999887743  5999999999999999999999999999999999999999999999999999764322


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                            ....++|+.|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..+++..+....|.|..+.+..+.
T Consensus       180 ------~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  252 (353)
T 3coi_A          180 ------MTGYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  252 (353)
T ss_dssp             ----------CCSBCCSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred             ------ccccccCcCcCCHHHHhCc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence                  2346799999999988753 578999999999999999999999999999999999999999999999888888


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCCCCCccchhHHH
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFE  334 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~~~~~~~~~~~e  334 (614)
                      ......++..+.......+...++.+++.+.+||.+||..||.+|||++++|+||||+.+...+.+.....  .+....+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~--~~~~~~~  330 (353)
T 3coi_A          253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQ--PFDDSLE  330 (353)
T ss_dssp             CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCSS--CCCCTTT
T ss_pred             hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCccccccCCC--CCccchh
Confidence            77777787777766666777778889999999999999999999999999999999998876554433221  2233445


Q ss_pred             hhcCCHHHHHHHHHHHHHHhCc
Q 007177          335 RRRVTKEDIRELIFREILEYHP  356 (614)
Q Consensus       335 ~~~~~~e~~~~~~~~ei~~~~~  356 (614)
                      ....+.+++++.+++++.++++
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T 3coi_A          331 HEKLTVDEWKQHIYKEIVNFSP  352 (353)
T ss_dssp             TCCCCHHHHHHHHHHHHHTCCC
T ss_pred             hccCCHHHHHHHHHHHHHhhcc
Confidence            6678899999999999988765


No 26 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=2.4e-51  Score=427.63  Aligned_cols=299  Identities=38%  Similarity=0.632  Sum_probs=240.9

Q ss_pred             CCccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 007177            6 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHI   85 (614)
Q Consensus         6 ~~~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v   85 (614)
                      +..+-....+..++|++++.||+|+||.||+|.+. +|+.||+|++............+.+|+.+|+.++||||++++++
T Consensus         9 ~~~~~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   87 (311)
T 3niz_A            9 SGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV   87 (311)
T ss_dssp             ------CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccceeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            34455566788899999999999999999999985 58999999997654444455778899999999999999999999


Q ss_pred             ecCCCCCCCCcEEEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEee
Q 007177           86 MLPPSRRDFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICD  164 (614)
Q Consensus        86 ~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~D  164 (614)
                      +     .+...+|+|||||+++|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|
T Consensus        88 ~-----~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~D  162 (311)
T 3niz_A           88 I-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLAD  162 (311)
T ss_dssp             E-----CCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             E-----ccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEcc
Confidence            8     4556799999999999999887654 599999999999999999999999999999999999999999999999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++.......   .....++|+.|+|||++.+. ..|+.++|||||||++|+|++|++||.+.+..+.+..+...++.
T Consensus       163 fg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  238 (311)
T 3niz_A          163 FGLARAFGIPVR---SYTHEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT  238 (311)
T ss_dssp             CTTCEETTSCCC------CCCCCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCC
T ss_pred             CcCceecCCCcc---cccCCcccCCcCCHHHhcCC-CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCC
Confidence            999987543222   22446789999999998652 46899999999999999999999999999999999999999999


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      +....+.......... ...........+....+.+++++.+||.+||++||++|||++|+|+||||+++.
T Consensus       239 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          239 PNPREWPQVQELPLWK-QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CCTTTSGGGTTSHHHH-SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             CChHHhhhhhccchhh-hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            9877765543321110 000111112223334567899999999999999999999999999999999764


No 27 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=1.8e-51  Score=439.28  Aligned_cols=330  Identities=35%  Similarity=0.661  Sum_probs=256.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC-CCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS-RRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~-~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||+++++++.... ..+.
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            357999999999999999999999999999999999866566667788999999999999999999999986542 2345


Q ss_pred             CcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           95 KDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..+|+|||||+++|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       103 ~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  180 (371)
T 2xrw_A          103 QDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  180 (371)
T ss_dssp             CEEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-------
T ss_pred             cceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccc
Confidence            5799999999999999986  35999999999999999999999999999999999999999999999999999865322


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      .    .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|..||.+.+..+++..+...+|.|..+.+..+.
T Consensus       181 ~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  254 (371)
T 2xrw_A          181 F----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ  254 (371)
T ss_dssp             -------------CTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred             c----ccCCceecCCccCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            1    2345689999999999987  679999999999999999999999999999999999999999999887776553


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCC------------CCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPN------------ADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS  322 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~------------~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~  322 (614)
                      . ....++..........+...++.            .++.+++||.+||..||.+|||++|+|+||||+.+........
T Consensus       255 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~  333 (371)
T 2xrw_A          255 P-TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA  333 (371)
T ss_dssp             H-HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCHHHHTC
T ss_pred             h-HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCccccCC
Confidence            2 22333332222222222221211            1567999999999999999999999999999987654321111


Q ss_pred             CCCCccchhHHHhhcCCHHHHHHHHHHHHHHhC
Q 007177          323 CQPISKMEFEFERRRVTKEDIRELIFREILEYH  355 (614)
Q Consensus       323 ~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~  355 (614)
                      ..+ .......+.+..+.+++++++++++..+.
T Consensus       334 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (371)
T 2xrw_A          334 PPP-KIPDKQLDEREHTIEEWKELIYKEVMDLE  365 (371)
T ss_dssp             CCC-CCCTTTTCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             CCC-CCCChhhccccCcHHHHHHHHHHHHHHHh
Confidence            111 11123345566788999999999997754


No 28 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.4e-51  Score=433.79  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=204.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ..+|.+.+.||+|+||+||+|..+     .++..||||+++.  ......+.+.+|+.+|+.|+|||||++++++     
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----  112 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVC-----  112 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----
Confidence            357899999999999999999865     3688999999975  3455667899999999999999999999999     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKAN---------------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN  155 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~---------------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~  155 (614)
                      .+...+|||||||+ |+|.+++...               ..+++.++..|+.||+.||.|||+.+||||||||+|||++
T Consensus       113 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~  192 (329)
T 4aoj_A          113 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG  192 (329)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence            44567999999999 6999999753               3599999999999999999999999999999999999999


Q ss_pred             CCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHH
Q 007177          156 ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQ  234 (614)
Q Consensus       156 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~  234 (614)
                      .++.+||+|||+|+........ ...+..+||+.|||||++.+  ..|+.++|||||||+||||+| |+.||.+.+..+.
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~--~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~  269 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA  269 (329)
T ss_dssp             TTTEEEECCCC-----------------CCCCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH
T ss_pred             CCCcEEEcccccceeccCCCcc-eecCcccccccccChhhhcC--CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence            9999999999999865433221 12245679999999999987  689999999999999999998 8999999887666


Q ss_pred             HHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          235 LDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       235 l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      +..+...                           ...   .....+++++.+|+.+||+.||++|||++|++++
T Consensus       270 ~~~i~~g---------------------------~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          270 IDCITQG---------------------------REL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHT---------------------------CCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcC---------------------------CCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            5554321                           011   1124578999999999999999999999999764


No 29 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.9e-51  Score=429.07  Aligned_cols=255  Identities=21%  Similarity=0.314  Sum_probs=210.7

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEE-----CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAID-----THTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP   89 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~   89 (614)
                      ...+++++++.||+|+||+||+|..     ..+++.||||+++... .....+.+.+|+.+|++|+|||||++++++.  
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~--   99 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVT--   99 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE--
Confidence            3456799999999999999999985     3467899999997542 2234567899999999999999999999994  


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcE
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKAN----------------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI  152 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~----------------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI  152 (614)
                         +...+|||||||+ |+|.++|...                ..+++..+..|+.||+.||.|||+++||||||||+||
T Consensus       100 ---~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NI  176 (308)
T 4gt4_A          100 ---KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV  176 (308)
T ss_dssp             ---SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ---ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccce
Confidence               4466899999999 6999999653                3589999999999999999999999999999999999


Q ss_pred             EECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCh
Q 007177          153 LANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV  231 (614)
Q Consensus       153 Li~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~  231 (614)
                      ||++++.+||+|||+|+........ ...+..+||+.|||||++.+  ..|+.++|||||||+||||+| |..||.+.+.
T Consensus       177 Ll~~~~~~Ki~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~--~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~  253 (308)
T 4gt4_A          177 LVYDKLNVKISDLGLFREVYAADYY-KLLGNSLLPIRWMAPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN  253 (308)
T ss_dssp             EECGGGCEEECCSCCBCGGGGGGCB-CSSSSSCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred             EECCCCCEEECCcccceeccCCCce-eEecccccCCcccCHHHHhC--CCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999875433221 12345689999999999987  689999999999999999998 8999999887


Q ss_pred             hHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          232 VHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       232 ~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .+.+..+...                           ...   ....++++.+.+|+.+||+.||.+|||+.||+++
T Consensus       254 ~~~~~~i~~~---------------------------~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          254 QDVVEMIRNR---------------------------QVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHHTT---------------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcC---------------------------CCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            6665544221                           111   1234678899999999999999999999999875


No 30 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1.3e-50  Score=416.91  Aligned_cols=287  Identities=36%  Similarity=0.594  Sum_probs=237.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++++.||+|+||.||+|.++.+++.||||++............+.+|+.+|+.++||||+++++++     .+...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence            589999999999999999999999999999999986555556667888999999999999999999998     455679


Q ss_pred             EEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCC
Q 007177           98 YVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP  176 (614)
Q Consensus        98 ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~  176 (614)
                      |+|||||+++|.+.+.. .+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  156 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred             EEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence            99999999988887765 56899999999999999999999999999999999999999999999999999986543221


Q ss_pred             CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCC-CCCCChhHHHHHHHhhhCCCchhhhhhhhc
Q 007177          177 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL-FPGKNVVHQLDLMTDLLGTPSLDTISRVRN  255 (614)
Q Consensus       177 ~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~p-F~g~~~~~~l~~i~~~~g~p~~~~i~~~~~  255 (614)
                         .....+||+.|+|||++.+. ..++.++|||||||++|+|++|..| |.+.+..+++..+...++.|..+.+.....
T Consensus       157 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          157 ---CYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             ---CCCSCCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred             ---cccCCccccCCcChHHHcCC-CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence               22456899999999998762 4489999999999999999977655 888888999999999999998876654332


Q ss_pred             hhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          256 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       256 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      ...  +................+.+++.+++||.+||+.||++|||++|+|+||||+++.
T Consensus       233 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          233 LPD--YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             STT--CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccc--ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            100  0000000111222334567899999999999999999999999999999998753


No 31 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=4.4e-50  Score=422.23  Aligned_cols=263  Identities=27%  Similarity=0.472  Sum_probs=227.0

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ++....++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++     
T Consensus         9 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----   83 (328)
T 3fe3_A            9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----   83 (328)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             ccCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----
Confidence            344556789999999999999999999999999999999987666677788899999999999999999999998     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+.+.+|+|||||+ ++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  163 (328)
T 3fe3_A           84 ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE  163 (328)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGG
T ss_pred             EECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCcee
Confidence            45577999999997 69999998888999999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y-~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .....    .....+||++|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+..+....+...        
T Consensus       164 ~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--------  229 (328)
T 3fe3_A          164 FTVGG----KLDAFCGAPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--------  229 (328)
T ss_dssp             GSSSC----GGGTTSSSGGGCCHHHHHT--CCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------
T ss_pred             cCCCC----ccccccCCcceeCcccccC--CCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------
Confidence            54322    2356789999999999987  454 57999999999999999999999998866555544220        


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                        ...     ....+++.+.+||.+||..||.+|||++|+|+||||+....
T Consensus       230 ------------------~~~-----~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          230 ------------------KYR-----IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             ------------------CCC-----CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             ------------------CCC-----CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence                              000     11246889999999999999999999999999999987543


No 32 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.4e-50  Score=416.22  Aligned_cols=284  Identities=38%  Similarity=0.638  Sum_probs=233.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++++.||+|+||.||+|.+ .+|+.||||++............+.+|+.+|+.++||||+++++++     .+...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence            5899999999999999999998 6799999999975433333346678999999999999999999998     345679


Q ss_pred             EEEEecCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCC
Q 007177           98 YVVFELMESDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP  176 (614)
Q Consensus        98 ylV~E~~~g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~  176 (614)
                      |+||||++++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (288)
T ss_dssp             EEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             EEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence            999999999999999864 6799999999999999999999999999999999999999999999999999986542221


Q ss_pred             CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhch
Q 007177          177 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND  256 (614)
Q Consensus       177 ~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~  256 (614)
                         .....++|+.|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.+....+......
T Consensus       156 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T 1ob3_A          156 ---KYTHEIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL  231 (288)
T ss_dssp             ---------CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             ---ccccccccccccCchheeCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcc
Confidence               12445789999999998652 46899999999999999999999999999999999999999998876655433211


Q ss_pred             hHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          257 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                        ..+........+..+......+++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          232 --PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             --TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             --cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence              0111111222333444556678999999999999999999999999999999985


No 33 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.5e-50  Score=423.04  Aligned_cols=302  Identities=35%  Similarity=0.541  Sum_probs=227.0

Q ss_pred             CCCCCCccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcce
Q 007177            2 LQNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVE   81 (614)
Q Consensus         2 ~~~~~~~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~   81 (614)
                      |+++............++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||++
T Consensus        18 Gp~s~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (329)
T 3gbz_A           18 GPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIE   97 (329)
T ss_dssp             --------------CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCC
T ss_pred             CCCcceeccCCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcce
Confidence            44555555556666778999999999999999999999999999999999765444444567789999999999999999


Q ss_pred             eeeEecCCCCCCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC-----C
Q 007177           82 IKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-----A  156 (614)
Q Consensus        82 l~~v~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~-----~  156 (614)
                      +++++     .+...+|||||||+++|.+++.....+++..++.|+.||+.||.|||++||+||||||+|||++     .
T Consensus        98 ~~~~~-----~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  172 (329)
T 3gbz_A           98 LKSVI-----HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE  172 (329)
T ss_dssp             EEEEE-----EETTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----
T ss_pred             EEEEE-----ecCCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCc
Confidence            99998     4556799999999999999999998999999999999999999999999999999999999994     4


Q ss_pred             CCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHH
Q 007177          157 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD  236 (614)
Q Consensus       157 ~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~  236 (614)
                      ++.+||+|||+++.......   .....++|+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  248 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGIPIR---QFTHEIITLWYRPPEILLGS-RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF  248 (329)
T ss_dssp             CCEEEECCTTHHHHHC--------------CCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cceEEECcCCCccccCCccc---ccCCCcCCccccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH
Confidence            55699999999987543221   12445789999999998762 458999999999999999999999999999999999


Q ss_pred             HHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCC-CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          237 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       237 ~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      .+...++.|....+........  +...........+... ...+++++.+||.+||+.||.+|||++|+|+||||++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          249 KIFEVLGLPDDTTWPGVTALPD--WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             HHHHHHCCCCTTTSTTGGGSTT--CCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             HHHHHhCCCchhhhhhhhhhhh--hhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            9999999887766543321100  0000000000000000 01267899999999999999999999999999999865


No 34 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.6e-50  Score=429.59  Aligned_cols=256  Identities=24%  Similarity=0.402  Sum_probs=210.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCC-----cEEEEEEecCccCChHHHHHHHHHHHHHHhcCC-CCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAARILREIKLLRLLRH-PDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg-----~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~H-pnIv~l~~v~~~~   89 (614)
                      ..++|++++.||+|+||+||+|.+..++     +.||||+++.. ........+.+|+.+|+.++| ||||++++++.. 
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~-  139 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-  139 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC-
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe-
Confidence            3468999999999999999999876543     57999999753 334556789999999999975 899999999843 


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcE
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKAN----------------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI  152 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~----------------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI  152 (614)
                         +...+|||||||+ |+|.++|+..                ..+++.++..|+.||+.||.|||+++||||||||+||
T Consensus       140 ---~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI  216 (353)
T 4ase_A          140 ---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  216 (353)
T ss_dssp             ---TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ---cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence               2356899999999 6999999753                3489999999999999999999999999999999999


Q ss_pred             EECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCh
Q 007177          153 LANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV  231 (614)
Q Consensus       153 Li~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~  231 (614)
                      |++.++.+||+|||+|+....+... ......+||+.|||||++.+  ..|+.++|||||||+||||+| |.+||.+.+.
T Consensus       217 Ll~~~~~vKi~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~--~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          217 LLSEKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             EECGGGCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             eeCCCCCEEECcchhhhhcccCCCc-eeeccccccccccCHHHHhc--CCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999876543322 22345689999999999987  689999999999999999998 9999998765


Q ss_pred             hHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          232 VHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       232 ~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .+.+..+..                          .....   .....+++++.+||.+||+.||++|||+.|+++|
T Consensus       294 ~~~~~~~i~--------------------------~g~~~---~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          294 DEEFCRRLK--------------------------EGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             SHHHHHHHH--------------------------HTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHH--------------------------cCCCC---CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            443332211                          00011   1123578999999999999999999999999987


No 35 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.2e-49  Score=420.17  Aligned_cols=332  Identities=36%  Similarity=0.662  Sum_probs=262.7

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC---------ChHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE---------HISDAARILREIKLLRLLRHPDIVEIKHI   85 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~---------~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v   85 (614)
                      ...++|++++.||+|+||.||+|.+.. |..||||++.....         .......+.+|+.+|+.++||||++++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   97 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI   97 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence            346799999999999999999999865 99999999864322         22345788999999999999999999999


Q ss_pred             ecCCCCCCCCcEEEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEee
Q 007177           86 MLPPSRRDFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICD  164 (614)
Q Consensus        86 ~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~D  164 (614)
                      +..........+|+|||||+++|.+.+.... .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  177 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD  177 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             EEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence            8665545566899999999999999987654 699999999999999999999999999999999999999999999999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++.......    ....++|++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+.
T Consensus       178 fg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  252 (362)
T 3pg1_A          178 FNLAREDTADAN----KTHYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT  252 (362)
T ss_dssp             TTC-------------------CGGGCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cCcccccccccc----cceecccceecCcHHhcCC-CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            999975433222    2446799999999988753 56899999999999999999999999999999999999999999


Q ss_pred             CchhhhhhhhchhHHHHHHhhccc-CCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccCCCCC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKK-QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSC  323 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~~~~~  323 (614)
                      |..+.+..........++...... ....+....+..++.+.+||.+||+.||.+|||++|+|+||||+.+.........
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~  332 (362)
T 3pg1_A          253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEG  332 (362)
T ss_dssp             CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGTTT
T ss_pred             CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccccccc
Confidence            998887766665555554332222 2223334456789999999999999999999999999999999987543322211


Q ss_pred             CCCccchhHHHhhcCCHHHHHHHHHHHHHHhC
Q 007177          324 QPISKMEFEFERRRVTKEDIRELIFREILEYH  355 (614)
Q Consensus       324 ~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~  355 (614)
                      .   ...+.++....+..++++.++.|+.+++
T Consensus       333 ~---~~~~~~~~~~~~~~~~~~~~~~e~~~~~  361 (362)
T 3pg1_A          333 L---SERFHFDESVTDVYDMHKIFTAEVERFN  361 (362)
T ss_dssp             C---CCCCCCCTTCCCHHHHHHHHHHHHHHHC
T ss_pred             c---ccccChhhhhhhHHHHHHHHHHHHHHhc
Confidence            1   1123444566678899999999988764


No 36 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=4.2e-50  Score=416.22  Aligned_cols=289  Identities=34%  Similarity=0.559  Sum_probs=234.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC---hHHHHHHHHHHHHHHhc---CCCCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH---ISDAARILREIKLLRLL---RHPDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~---~~~~~~i~~Ei~iL~~L---~HpnIv~l~~v~~~~   89 (614)
                      ..++|++++.||+|+||.||+|.+..+++.||||++......   ......+.+|+.+++.+   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357999999999999999999999999999999998643211   11123455677777666   499999999998655


Q ss_pred             CCCCCCcEEEEEecCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           90 SRRDFKDIYVVFELMESDLHQVIKANDD--LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~g~L~~~i~~~~~--lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      .......+|+||||++++|.+++.....  +++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence            4333446899999999999999987654  99999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      ++.......    ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|.+||.+.+..+.+..+.+.++.+..
T Consensus       167 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (308)
T 3g33_A          167 ARIYSYQMA----LTPVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  240 (308)
T ss_dssp             TTTSTTCCC----SGGGGCCCSSCCHHHHHT--SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             ccccCCCcc----cCCccccccccCchHHcC--CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            986543222    245689999999999976  67999999999999999999999999999999999999999999887


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      ..+........    .......+..+....+.+++.+.+||.+||++||.+|||++|+|+||||++.
T Consensus       241 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          241 DDWPRDVSLPR----GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             TTSCSSCSSCG----GGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             hhccchhhccc----cccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            76543221110    0111222333344567889999999999999999999999999999999853


No 37 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.4e-49  Score=412.06  Aligned_cols=292  Identities=35%  Similarity=0.621  Sum_probs=231.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++     .+...
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCe
Confidence            4689999999999999999999999999999999976555555567788999999999999999999998     44567


Q ss_pred             EEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           97 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        97 ~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      +|+|||||++ +|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            9999999995 777788778889999999999999999999999999999999999999999999999999998654322


Q ss_pred             CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhc
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN  255 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~  255 (614)
                      .   .....+||++|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++............
T Consensus       157 ~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (311)
T 4agu_A          157 D---YYDDEVATRWYRSPELLVGD-TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST  232 (311)
T ss_dssp             ------------GGGCCHHHHHTC-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred             c---ccCCCcCCccccChHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc
Confidence            1   22456799999999998652 5689999999999999999999999999999999999988888766544332211


Q ss_pred             hhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcc
Q 007177          256 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV  317 (614)
Q Consensus       256 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~  317 (614)
                      .....................++++++.+.+||.+||+.||.+|||++|+|+||||+++...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence            11000000000001111222356789999999999999999999999999999999987654


No 38 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.9e-49  Score=423.09  Aligned_cols=269  Identities=27%  Similarity=0.436  Sum_probs=228.7

Q ss_pred             ccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhcCCCCcceee
Q 007177            8 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLLRHPDIVEIK   83 (614)
Q Consensus         8 ~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L~HpnIv~l~   83 (614)
                      |+.+......++|++++.||+|+||.||+|.++.+|+.||||+++......    .....+.+|+.+|+.++||||++++
T Consensus         2 ~~~~~~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~   81 (361)
T 2yab_A            2 METFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH   81 (361)
T ss_dssp             --CCBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cccccCCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEE
Confidence            345566667788999999999999999999999999999999997543221    1346788999999999999999999


Q ss_pred             eEecCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC----
Q 007177           84 HIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC----  158 (614)
Q Consensus        84 ~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~----  158 (614)
                      +++     .+...+|+|||||. ++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++    
T Consensus        82 ~~~-----~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~  156 (361)
T 2yab_A           82 DVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP  156 (361)
T ss_dssp             EEE-----ECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSC
T ss_pred             EEE-----EeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCcc
Confidence            998     45577999999997 69999998888999999999999999999999999999999999999998877    


Q ss_pred             cEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 007177          159 KLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLM  238 (614)
Q Consensus       159 ~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i  238 (614)
                      .+||+|||+++......    .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+..+.+..|
T Consensus       157 ~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i  230 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI  230 (361)
T ss_dssp             CEEECCCSSCEECCTTC----CCCCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred             CEEEEecCCceEcCCCC----ccccCCCCccEECchHHcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            79999999998754332    1245689999999999986  68999999999999999999999999998877666655


Q ss_pred             HhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          239 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       239 ~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      .......                           ....|..+++.+++||.+||..||.+|||++|+|+||||+.+
T Consensus       231 ~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          231 TAVSYDF---------------------------DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HTTCCCC---------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HhcCCCC---------------------------CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            4321111                           112346788999999999999999999999999999999864


No 39 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.3e-50  Score=421.16  Aligned_cols=288  Identities=35%  Similarity=0.626  Sum_probs=233.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+|+.++||||+++++++     .+...+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   75 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSL   75 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEE
Confidence            589999999999999999999999999999999974321 11222455899999999999999999998     455679


Q ss_pred             EEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCC
Q 007177           98 YVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP  176 (614)
Q Consensus        98 ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~  176 (614)
                      |+|||||+++|.+++...+ .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  155 (324)
T 3mtl_A           76 TLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  155 (324)
T ss_dssp             EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             EEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence            9999999999999987754 599999999999999999999999999999999999999999999999999976432221


Q ss_pred             CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhch
Q 007177          177 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND  256 (614)
Q Consensus       177 ~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~  256 (614)
                         .....+||++|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+++..+...++.|....+......
T Consensus       156 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          156 ---TYDNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             ----------CGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             ---ccccccCcccccChhhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence               22445789999999998652 56899999999999999999999999999999999999999999988877655433


Q ss_pred             hHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          257 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      ...... .............++.+++.+.+||.+||+.||.+|||++|+|+||||..+..
T Consensus       232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          232 EEFKTY-NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             HHHHHT-CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             hhhccc-ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            221111 11111222223345678999999999999999999999999999999998754


No 40 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=4.5e-50  Score=418.85  Aligned_cols=288  Identities=34%  Similarity=0.615  Sum_probs=221.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||+++... .......+.+|+.+|+.++||||+++++++     .+.+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~   77 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENK   77 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCe
Confidence            468999999999999999999999999999999997432 222345678999999999999999999998     45567


Q ss_pred             EEEEEecCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           97 IYVVFELMESDLHQVIKAN------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        97 ~ylV~E~~~g~L~~~i~~~------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      +|+|||||+++|.+++...      ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARA  157 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence            9999999999999998753      3599999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......   .....++|+.|+|||++.+. ..|+.++|||||||++|+|++|++||.+.+..+++..+.+..|.|....+
T Consensus       158 ~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  233 (317)
T 2pmi_A          158 FGIPVN---TFSSEVVTLWYRAPDVLMGS-RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW  233 (317)
T ss_dssp             TTSCCC---CCCCCCSCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTC
T ss_pred             cCCCcc---cCCCCcccccccCchHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHh
Confidence            543222   12445799999999998752 46899999999999999999999999999999999999999999877665


Q ss_pred             hhhhchhHHHHHHhhcccCCCcc-----cCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQF-----SQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      .......  .+...+....+..+     ......+++.+.+||.+||+.||.+|||++|+|+||||+++..
T Consensus       234 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          234 PSVTKLP--KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             GGGGGCT--TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             hhhhhhh--hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence            4432110  00000000000000     0112357889999999999999999999999999999998754


No 41 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=3.1e-49  Score=425.75  Aligned_cols=287  Identities=36%  Similarity=0.660  Sum_probs=234.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC-CCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR-RDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~-~~~~   95 (614)
                      ..+|++++.||+|+||.||+|.+..+++ ||+|++.....      ...+|+.+|+.++||||+++++++..... .+..
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~  111 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV  111 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence            3579999999999999999999987766 88888754211      12379999999999999999999865432 3445


Q ss_pred             cEEEEEecCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC-CCCcEEEeecCcccc
Q 007177           96 DIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARV  170 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~----~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~-~~~~vKL~DFGla~~  170 (614)
                      .+|+|||||++++...+.    ....+++..++.|++||+.||.|||+.||+||||||+|||++ .++.+||+|||+++.
T Consensus       112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            589999999987766554    356899999999999999999999999999999999999999 799999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......    ...+++|++|+|||++.+. ..|+.++|||||||++|+|++|++||.+.+..+++..|...+|+|..+.+
T Consensus       192 ~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          192 LIAGEP----NVSYICSRYYRAPELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI  266 (394)
T ss_dssp             CCTTCC----CCSSCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             ccCCCC----CcccccCcCccCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            543322    2456899999999998652 46999999999999999999999999999999999999999999998877


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCC-CCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCccc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE  318 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~  318 (614)
                      ..........   .+....+.++...+ +.+++++.+||.+||++||.+|||+.|+|+||||+.+....
T Consensus       267 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          267 KTMNPNYMEH---KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             HHHCGGGSSS---CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             HhhChhhhhh---ccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            6543221100   11112222333333 35889999999999999999999999999999999886544


No 42 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=7.3e-49  Score=426.53  Aligned_cols=287  Identities=34%  Similarity=0.627  Sum_probs=232.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC-CCCCCc
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS-RRDFKD   96 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~-~~~~~~   96 (614)
                      .+|++++.||+|+||.||+|.++.+|+.||||++....      ....+|+.+|+.|+||||+++++++.... ..+...
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            36999999999999999999999999999999986431      12347999999999999999999885432 133445


Q ss_pred             EEEEEecCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC-CcEEEeecCccccc
Q 007177           97 IYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVA  171 (614)
Q Consensus        97 ~ylV~E~~~g~L~~~i~----~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~-~~vKL~DFGla~~~  171 (614)
                      +++|||||+++|.+++.    ....+++..++.|++||+.||.|||++||+||||||+|||++.+ +.+||+|||+++..
T Consensus       128 ~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            78999999998877764    35679999999999999999999999999999999999999965 57899999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....    ...++||++|+|||++.+. ..|+.++||||||||+|||++|++||.+.+..+++..|...+|+|..+.+.
T Consensus       208 ~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~  282 (420)
T 1j1b_A          208 VRGEP----NVSYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR  282 (420)
T ss_dssp             CTTCC----CCSCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             ccCCC----ceeeeeCCCcCCHHHHcCC-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            43322    2456899999999998652 479999999999999999999999999999999999999999999987775


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCC-CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCccc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE  318 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~  318 (614)
                      ........ +  .+.......+... .+.+++++.+||.+||.+||.+|||++|+|+||||+.+....
T Consensus       283 ~~~~~~~~-~--~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  347 (420)
T 1j1b_A          283 EMNPNYTE-F--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN  347 (420)
T ss_dssp             HHCSCCCC-C--CCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTT
T ss_pred             hhChhhhh-h--ccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccccc
Confidence            43211000 0  0000111111111 246789999999999999999999999999999999876543


No 43 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=5.8e-49  Score=430.54  Aligned_cols=261  Identities=27%  Similarity=0.474  Sum_probs=224.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++........+...+.+|+.+|+.|+||||+++++++     .+.+.
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~~~   84 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEGH   84 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECSSE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EECCE
Confidence            4579999999999999999999999999999999986555555677889999999999999999999998     55678


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC---CCCcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN---ANCKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~---~~~~vKL~DFGla~~~~  172 (614)
                      +|+|||||. |+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++...
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            999999998 59999999999999999999999999999999999999999999999998   45789999999997654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+..+.+..+..            
T Consensus       165 ~~~~---~~~~~~gt~~Y~APE~l~~--~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~------------  227 (444)
T 3soa_A          165 GEQQ---AWFGFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA------------  227 (444)
T ss_dssp             TTCC---BCCCSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH------------
T ss_pred             CCCc---eeecccCCcccCCHHHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh------------
Confidence            3322   2345789999999999987  6899999999999999999999999998876665555432            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                     .........|+.+++.+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       228 ---------------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          228 ---------------GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             ---------------TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             ---------------CCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence                           11112234567889999999999999999999999999999999854


No 44 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-48  Score=415.02  Aligned_cols=261  Identities=30%  Similarity=0.442  Sum_probs=214.2

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++..... ..+..++.+|+.+|+.++||||+++++++     .+.
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~   80 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL-GSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETA   80 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc-chHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeC
Confidence            346789999999999999999999999999999999975432 23456788999999999999999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+|||||+ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        81 ~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  160 (347)
T 3zgw_A           81 NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG  160 (347)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence            67999999997 69999998888999999999999999999999999999999999999999999999999999876433


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ...  ......+||+.|+|||++.+. ..++.++||||||||+|+|++|..||.+.+..+....+...            
T Consensus       161 ~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~------------  225 (347)
T 3zgw_A          161 NKD--YHLQTCCGSLAYAAPELIQGK-SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG------------  225 (347)
T ss_dssp             -------------CGGGCCHHHHTTC----CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------------
T ss_pred             CCC--ccccccCCccCccCHHHHcCC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------------
Confidence            221  123456899999999999862 23489999999999999999999999988876665554321            


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                    .  .   .....+++.+.+||.+||+.||.+|||++|+|+||||....
T Consensus       226 --------------~--~---~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~  268 (347)
T 3zgw_A          226 --------------K--Y---DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY  268 (347)
T ss_dssp             --------------C--C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred             --------------C--C---CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence                          0  0   11234788999999999999999999999999999998643


No 45 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.1e-48  Score=433.46  Aligned_cols=259  Identities=31%  Similarity=0.511  Sum_probs=217.5

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++++.||+|+||.||+|.++.++..||||++............+.+|+.+|+.++||||+++++++     .+...+
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~  111 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRNY  111 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCEE
Confidence            479999999999999999999999999999999976543344456788999999999999999999998     455779


Q ss_pred             EEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC---CcEEEeecCccccccC
Q 007177           98 YVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN---CKLKICDFGLARVAFN  173 (614)
Q Consensus        98 ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~---~~vKL~DFGla~~~~~  173 (614)
                      |+|||||. ++|.+.+.....+++..++.|+.||+.||.|||+.||+||||||+|||++.+   +.+||+|||+++....
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            99999998 5999999888889999999999999999999999999999999999999764   4599999999987543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ..    .....+||++|+|||++.+   .|+.++|||||||++|+|++|.+||.+.+..+.+..+...            
T Consensus       192 ~~----~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~------------  252 (494)
T 3lij_A          192 QK----KMKERLGTAYYIAPEVLRK---KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG------------  252 (494)
T ss_dssp             TB----CBCCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------------
T ss_pred             Cc----cccccCCCcCeeCHHHHcc---cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------------
Confidence            32    2345689999999999864   6899999999999999999999999998876665555321            


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                     ........|..+++.+++||.+||+.||.+|||++|+|+||||+...
T Consensus       253 ---------------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~  299 (494)
T 3lij_A          253 ---------------KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC  299 (494)
T ss_dssp             ---------------CCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred             ---------------CCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence                           11112234567899999999999999999999999999999998653


No 46 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.9e-48  Score=411.52  Aligned_cols=257  Identities=25%  Similarity=0.454  Sum_probs=220.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||++++... .......+.+|+.+|+.++||||+++++++     .+..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCC
Confidence            4689999999999999999999999999999999974311 122356688999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      .+|+|||||+ |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            7999999998 599999988888999999999999999999999999999999999999999999999999999864322


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      ..   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+.......|..              
T Consensus       159 ~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--------------  219 (337)
T 1o6l_A          159 GA---TMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--------------  219 (337)
T ss_dssp             TC---CBCCCEECGGGCCGGGGSS--SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--------------
T ss_pred             CC---cccccccChhhCChhhhcC--CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc--------------
Confidence            22   2345689999999999987  6899999999999999999999999988876555444421              


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                                  .  ...   ....+++++.+||.+||+.||.+||     +++|+++||||+++
T Consensus       220 ------------~--~~~---~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          220 ------------E--EIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             ------------C--CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             ------------C--CCC---CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence                        0  011   1235789999999999999999999     99999999999865


No 47 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=5.7e-49  Score=418.04  Aligned_cols=258  Identities=24%  Similarity=0.416  Sum_probs=216.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++++.. ........+.+|+.+|+.+ +||||+++++++     .+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~   95 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----QT   95 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----Ee
Confidence            3578999999999999999999999999999999997531 1223456678999999988 699999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+|||||. ++|.+++...+.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~  175 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI  175 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence            567999999998 5999999988899999999999999999999999999999999999999999999999999998533


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+..+.+..|...           
T Consensus       176 ~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------  239 (353)
T 3txo_A          176 CNGV---TTATFCGTPDYIAPEILQE--MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND-----------  239 (353)
T ss_dssp             C------------CCGGGCCHHHHHH--HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             cCCc---cccccCCCcCeEChhhcCC--CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------
Confidence            2221   2345689999999999987  57999999999999999999999999998877666655321           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCH------HHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTA------EEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa------~eiL~hp~f~~~  314 (614)
                                       ...   ....+++.+.+||.+||+.||.+||++      +|+++||||+++
T Consensus       240 -----------------~~~---~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          240 -----------------EVV---YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             -----------------CCC---CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             -----------------CCC---CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence                             011   113478899999999999999999999      999999999875


No 48 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1e-48  Score=419.41  Aligned_cols=286  Identities=32%  Similarity=0.674  Sum_probs=231.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC----
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR----   91 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~----   91 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++.....      ...+|+.+|+.++||||+++++++.....    
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            35689999999999999999999999999999999864321      12379999999999999999999854432    


Q ss_pred             -----------------------------CCCCcEEEEEecCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHH
Q 007177           92 -----------------------------RDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIH  138 (614)
Q Consensus        92 -----------------------------~~~~~~ylV~E~~~g~L~~~i~----~~~~lse~~~~~i~~QIl~aL~yLH  138 (614)
                                                   .+...+|+|||||+++|.+.+.    ....+++..++.|++||+.||.|||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             -------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                         3345689999999998777765    3568999999999999999999999


Q ss_pred             hCCeEeecCCCCcEEEC-CCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHH
Q 007177          139 TANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA  217 (614)
Q Consensus       139 s~gIvHrDLKP~NILi~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~  217 (614)
                      +.||+||||||+|||++ .++.+||+|||+++.......    ....++|+.|+|||++.+. ..|+.++|||||||++|
T Consensus       159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP----SVAYICSRFYRAPELMLGA-TEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC----CCCCCCCSSCCCHHHHTTC-SSCCTHHHHHHHHHHHH
T ss_pred             HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC----CcCcccCCCccCHHHhcCC-CCCCcchhhhhHHHHHH
Confidence            99999999999999997 688999999999986543322    2456789999999988762 45899999999999999


Q ss_pred             HHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCC-CCCCHHHHHHHHHhcCCCC
Q 007177          218 EVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDP  296 (614)
Q Consensus       218 eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~l~dLI~~mL~~DP  296 (614)
                      +|++|++||.+.+..+++..+...+|.|..+.+..........   .........+...+ ...++.+.+||.+||+.||
T Consensus       234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV---RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C---CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc---cCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            9999999999999999999999999999988775543211000   00001111112222 3478899999999999999


Q ss_pred             CCCCCHHHHHcCcccccCC
Q 007177          297 KDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       297 ~~Rpsa~eiL~hp~f~~~~  315 (614)
                      .+|||+.|+|+||||+.+.
T Consensus       311 ~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          311 DLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             GGSCCHHHHHTSGGGHHHH
T ss_pred             hhCCCHHHHhcCHHHHHHH
Confidence            9999999999999998764


No 49 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.1e-48  Score=432.67  Aligned_cols=262  Identities=33%  Similarity=0.532  Sum_probs=222.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++............+.+|+.+|+.++||||+++++++     .+..
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~   94 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSS   94 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCC
Confidence            34689999999999999999999999999999999965433333456788999999999999999999998     4557


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC---CCCcEEEeecCccccc
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN---ANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~---~~~~vKL~DFGla~~~  171 (614)
                      .+|+|||||. ++|.+.+.....+++..++.|+.||+.||.|||++||+||||||+|||++   .++.+||+|||+++..
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence            7999999998 59999998888899999999999999999999999999999999999995   4567999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....    .....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+..+.+..+....         
T Consensus       175 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~---------  238 (486)
T 3mwu_A          175 QQNT----KMKDRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK---------  238 (486)
T ss_dssp             CCC--------CCTTGGGGCCGGGGGS---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------
T ss_pred             CCCC----ccCCCcCCCCCCCHHHhCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------
Confidence            4332    2345689999999999875   59999999999999999999999999988776665553311         


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                        .......|..+++.+++||.+||+.||.+|||+.++|+||||+....
T Consensus       239 ------------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          239 ------------------YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             ------------------CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             ------------------CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence                              11112234568899999999999999999999999999999987643


No 50 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.7e-48  Score=415.53  Aligned_cols=259  Identities=28%  Similarity=0.491  Sum_probs=223.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++............+.+|+.+|+.|+||||+++++++     .+....
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~  103 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFH  103 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCEE
Confidence            579999999999999999999999999999999986555666778899999999999999999999998     455779


Q ss_pred             EEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC---cEEEeecCccccccC
Q 007177           98 YVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC---KLKICDFGLARVAFN  173 (614)
Q Consensus        98 ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~---~vKL~DFGla~~~~~  173 (614)
                      |+|||||. ++|.+.+.....+++..+..++.||+.||.|||+.||+||||||+|||++.++   .+||+|||++.....
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            99999998 59999998888899999999999999999999999999999999999998654   599999999986543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ..    .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+....+..+...            
T Consensus       184 ~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~------------  245 (362)
T 2bdw_A          184 SE----AWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG------------  245 (362)
T ss_dssp             CC----SCCCSCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------------
T ss_pred             Cc----ccccCCCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------------
Confidence            22    2345689999999999987  68999999999999999999999999988765555444321            


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                     ........|..+++.+.+||.+||..||.+|||++++|+||||...
T Consensus       246 ---------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          246 ---------------AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             ---------------CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             ---------------CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence                           1111123345688999999999999999999999999999999754


No 51 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=8.5e-49  Score=414.18  Aligned_cols=299  Identities=34%  Similarity=0.537  Sum_probs=237.2

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC--
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR--   91 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~--   91 (614)
                      .+..++|++++.||+|+||.||+|.++.+|+.||||++............+.+|+.+|+.++||||+++++++.....  
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             SCBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             cccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            456789999999999999999999999999999999997554444445567899999999999999999999864321  


Q ss_pred             -CCCCcEEEEEecCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           92 -RDFKDIYVVFELMESDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        92 -~~~~~~ylV~E~~~g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                       ...+.+|+|||||+++|.+.+... ..+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        93 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             ----CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence             124578999999999998888764 579999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC-CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          170 VAFNDTP-TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       170 ~~~~~~~-~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ....... ........+||+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+++..+....+.+..+
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             cccccccccccccCCcccccCccCchhhcCC-CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            6542221 12223556899999999988652 468999999999999999999999999999999999999999988777


Q ss_pred             hhhhhhchhHHHHHHhhcccCCCcccCCC--CCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          249 TISRVRNDKARRYLTSMRKKQPVQFSQKF--PNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      .+...........+..... ....+...+  ...++.+.+||.+||+.||++|||++|+|+||||+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKG-QKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSS-CCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             hccccccchhhcccccccc-cccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            6554432211000000000 000000000  0136789999999999999999999999999999864


No 52 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=3.3e-48  Score=415.88  Aligned_cols=297  Identities=22%  Similarity=0.290  Sum_probs=222.5

Q ss_pred             CCCCCeEEEeEeeec--CceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           15 GDASRYKIQEVIGKG--SYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G--~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      +..++|++++.||+|  +||.||+|.++.+|+.||||++............+.+|+.+|+.++||||+++++++.     
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----   96 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----   96 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----
Confidence            556799999999999  9999999999999999999999866555666778889999999999999999999984     


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      +.+.+|+|||||+ ++|.+++...  ..+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            4567999999998 6999999875  679999999999999999999999999999999999999999999999999986


Q ss_pred             cccCCCCC----ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC-
Q 007177          170 VAFNDTPT----TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT-  244 (614)
Q Consensus       170 ~~~~~~~~----~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~-  244 (614)
                      ........    .......+||+.|+|||++.+....|+.++||||||||+|+|++|++||.+.+..+.+..+....-. 
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  256 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC  256 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------
T ss_pred             eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCc
Confidence            54322111    1112234799999999998764357899999999999999999999999988766655443221100 


Q ss_pred             -------Cchhhhhhhh----chhHHHHHH---hhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcc
Q 007177          245 -------PSLDTISRVR----NDKARRYLT---SMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPY  310 (614)
Q Consensus       245 -------p~~~~i~~~~----~~~~~~~l~---~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~  310 (614)
                             +.........    .......+.   .............+..+++.+.+||.+||+.||.+|||++|+|+|||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~  336 (389)
T 3gni_B          257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF  336 (389)
T ss_dssp             -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence                   0000000000    000000000   00000111112234568899999999999999999999999999999


Q ss_pred             cccCCc
Q 007177          311 FKGLSK  316 (614)
Q Consensus       311 f~~~~~  316 (614)
                      |+.+..
T Consensus       337 f~~~~~  342 (389)
T 3gni_B          337 FKQIKR  342 (389)
T ss_dssp             GGGC--
T ss_pred             HHHHhh
Confidence            998754


No 53 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.7e-48  Score=403.49  Aligned_cols=259  Identities=28%  Similarity=0.459  Sum_probs=218.9

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.....  .....+.+|+.+|+.++||||+++++++.     +.
T Consensus        17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~   89 (297)
T 3fxz_A           17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYL-----VG   89 (297)
T ss_dssp             CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred             ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEE-----EC
Confidence            445789999999999999999999999999999999864322  23456789999999999999999999984     44


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+|||||+ ++|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (297)
T 3fxz_A           90 DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (297)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            67999999997 6999999775 599999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|..||.+.+....+..+.... .+        
T Consensus       169 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~--------  234 (297)
T 3fxz_A          169 EQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TP--------  234 (297)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHHC--SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-SC--------
T ss_pred             ccc---ccCCccCCcCccChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CC--------
Confidence            322   2245689999999999987  689999999999999999999999998887655554432110 00        


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                         .......+++.+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       235 -------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          235 -------------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             -------------------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             -------------------CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence                               011123578899999999999999999999999999999854


No 54 
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.5e-48  Score=402.70  Aligned_cols=300  Identities=39%  Similarity=0.627  Sum_probs=235.8

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC--
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS--   90 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~--   90 (614)
                      .+...++|++++.||+|+||.||+|.+..+++.||||++..  ........+.+|+.+|+.++||||+++++++....  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   83 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ   83 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec--CChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence            45567899999999999999999999999999999999874  34556678899999999999999999999885432  


Q ss_pred             -------CCCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC-CCCcEEE
Q 007177           91 -------RRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-ANCKLKI  162 (614)
Q Consensus        91 -------~~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~-~~~~vKL  162 (614)
                             ..+...+|+||||++++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           84 LTDDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             CCC----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred             cccccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence                   134567999999999999999864 5699999999999999999999999999999999999997 5679999


Q ss_pred             eecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhh
Q 007177          163 CDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL  242 (614)
Q Consensus       163 ~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~  242 (614)
                      +|||+++................+|++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus       163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  241 (320)
T 2i6l_A          163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI  241 (320)
T ss_dssp             CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred             ccCccccccCCCcccccccccccccccccCcHHhcCc-ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            9999998754332222223455789999999987642 578999999999999999999999999999988888888877


Q ss_pred             CCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcc
Q 007177          243 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV  317 (614)
Q Consensus       243 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~  317 (614)
                      ..+..+........ ...++..........+...++.+++.+.+||.+||+.||.+|||++|+|+||||+.+.-.
T Consensus       242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          242 PVVHEEDRQELLSV-IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             CCCCHHHHHHHHTT-SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             CCCchhhhhhhhhc-CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence            77665554433221 111222222223333444567889999999999999999999999999999999976543


No 55 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.7e-48  Score=405.91  Aligned_cols=258  Identities=25%  Similarity=0.434  Sum_probs=222.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||+|.+...   ..+...+.+|+.+|+.++||||+++++++     .+..
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~   74 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESF-----ESME   74 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETT
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCC
Confidence            457899999999999999999999999999999998742   34556788999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC--CCcEEEeecCccccc
Q 007177           96 DIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA--NCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~--~~~vKL~DFGla~~~  171 (614)
                      .+|+|||||+ ++|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+|||++.  ++.+||+|||+++..
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            7999999998 59999997654 7999999999999999999999999999999999999987  789999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....    .....+||+.|+|||++.+  ..++.++|||||||++|+|++|.+||.+.+..+.+..+......+      
T Consensus       155 ~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------  222 (321)
T 1tki_A          155 KPGD----NFRLLFTAPEYYAPEVHQH--DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF------  222 (321)
T ss_dssp             CTTC----EEEEEESCGGGSCHHHHTT--CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC------
T ss_pred             CCCC----ccccccCChhhcCcHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC------
Confidence            4322    2245679999999999987  568999999999999999999999999988776666554322111      


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           ....++.+++++.+||.+||..||.+|||++|+|+||||+..
T Consensus       223 ---------------------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          223 ---------------------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             ---------------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ---------------------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                                 112345788999999999999999999999999999999864


No 56 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=2.2e-48  Score=400.47  Aligned_cols=289  Identities=38%  Similarity=0.634  Sum_probs=233.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++++.     +.+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK   76 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-----cCCc
Confidence            46899999999999999999999999999999998754333333467889999999999999999999983     4467


Q ss_pred             EEEEEecCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           97 IYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        97 ~ylV~E~~~g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      +|+||||+.++|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus        77 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  156 (299)
T 2r3i_A           77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  156 (299)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             eEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence            9999999999999999875  46999999999999999999999999999999999999999999999999999865432


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      ..   ......+|+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+....+....
T Consensus       157 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
T 2r3i_A          157 VR---TYTHEVVTLWYRAPEILLGA-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT  232 (299)
T ss_dssp             SB---CTTSCBCCCTTCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             cc---ccCcccccccccCcHHhhcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhh
Confidence            21   12345789999999998762 348999999999999999999999999999999999999998888765544322


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      ...  .+...........+....+.+++.+.+||.+||+.||++|||++++|+||||+++..
T Consensus       233 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          233 SMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  292 (299)
T ss_dssp             GST--TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cCc--ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence            100  000001111111222334568899999999999999999999999999999997654


No 57 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-48  Score=410.84  Aligned_cols=289  Identities=36%  Similarity=0.584  Sum_probs=231.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh---HHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI---SDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~---~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++.......   .....+.+|+.+|+.++||||+++++++     .
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF-----G   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE-----e
Confidence            4578999999999999999999999999999999997432211   1124678999999999999999999998     4


Q ss_pred             CCCcEEEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      +...+|+|||||+++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             eCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            456789999999999999987653 6999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....   .....++|++|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+++..+....+.|..+.+.
T Consensus       163 ~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          163 GSPNR---AYTHQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             TSCCC---CCCCSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             cCCcc---cCCcccccccccCchHhhCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence            43221   23456899999999998652 468999999999999999999999999999999999999999998776654


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      ......  .++ ........++...+..+++.+.+||.+||..||.+|||++|+|+||||++...
T Consensus       239 ~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          239 DMCSLP--DYV-TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             STTSST--TCC-CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             hhccCc--ccc-cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            432110  000 00011112223345678899999999999999999999999999999987543


No 58 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.1e-47  Score=426.71  Aligned_cols=320  Identities=26%  Similarity=0.362  Sum_probs=245.9

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh-----------HHHHHHHHHHHHHHhcCCCCcceee
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI-----------SDAARILREIKLLRLLRHPDIVEIK   83 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~-----------~~~~~i~~Ei~iL~~L~HpnIv~l~   83 (614)
                      ...++|++++.||+|+||.||+|.++.++..||||++.......           .....+.+|+.+|+.|+||||++++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            34578999999999999999999999999999999997542211           2346788999999999999999999


Q ss_pred             eEecCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC---c
Q 007177           84 HIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC---K  159 (614)
Q Consensus        84 ~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~---~  159 (614)
                      +++     .+...+|||||||+ ++|.+.+.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++   .
T Consensus       113 ~~~-----~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          113 DVF-----EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEE-----ECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSS
T ss_pred             EEE-----EcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCcc
Confidence            998     45678999999998 59999998888899999999999999999999999999999999999998876   6


Q ss_pred             EEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 007177          160 LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT  239 (614)
Q Consensus       160 vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~  239 (614)
                      +||+|||+++......    .....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+..+.+..+.
T Consensus       188 ~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  260 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLKK---KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE  260 (504)
T ss_dssp             EEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhcc---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999998654332    2345689999999999874   68999999999999999999999999988776666553


Q ss_pred             hhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccC
Q 007177          240 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVER  319 (614)
Q Consensus       240 ~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~  319 (614)
                      .....                           .....|..+++.+++||.+||++||.+|||++|+|+||||+.......
T Consensus       261 ~~~~~---------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~  313 (504)
T 3q5i_A          261 KGKYY---------------------------FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN  313 (504)
T ss_dssp             HCCCC---------------------------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCC
T ss_pred             cCCCC---------------------------CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhccc
Confidence            31111                           111234678999999999999999999999999999999987543210


Q ss_pred             CCCCCCCccchhHHHhhcCCHHHHHHHHHHHHHHhCch-hhhhhccccccccccChhHHHHHHHHHHHHhhhc
Q 007177          320 EPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHPQ-LLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENV  391 (614)
Q Consensus       320 ~~~~~~~~~~~~~~e~~~~~~e~~~~~~~~ei~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~  391 (614)
                              ...         ...+ ......+..+... .++..........++.+....++++.|+.+|.++
T Consensus       314 --------~~~---------~~~~-~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~  368 (504)
T 3q5i_A          314 --------KSD---------QKTL-CGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNG  368 (504)
T ss_dssp             --------GGG---------HHHH-HHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred             --------ccc---------hhhH-HHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCC
Confidence                    000         0001 1112223333322 1222111122234456778899999999999983


No 59 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.5e-48  Score=405.11  Aligned_cols=263  Identities=28%  Similarity=0.440  Sum_probs=223.4

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhcCCCCcceeeeEecCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLLRHPDIVEIKHIMLPP   89 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~   89 (614)
                      ....++|++.+.||+|+||.||+|.++.+|+.||||++.......    .....+.+|+.+|+.++||||+++++++   
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~---   83 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY---   83 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE---
Confidence            344568999999999999999999999999999999997543221    1356788999999999999999999998   


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC----cEEEee
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC----KLKICD  164 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~----~vKL~D  164 (614)
                        .+...+|+|||||+ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++    .+||+|
T Consensus        84 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  161 (326)
T 2y0a_A           84 --ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID  161 (326)
T ss_dssp             --ECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred             --EeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence              45567999999997 59999998888899999999999999999999999999999999999999887    799999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++.......    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus       162 fg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          162 FGLAHKIDFGNE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  235 (326)
T ss_dssp             CTTCEECCTTSC----CCCCCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CCCCeECCCCCc----cccccCCcCcCCceeecC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence            999987543221    244679999999999976  67999999999999999999999999988876665554332111


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      .                           ....++.+++.+.+||.+||..||.+|||++|+|+||||+..
T Consensus       236 ~---------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          236 F---------------------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             C---------------------------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             c---------------------------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            1                           112235678999999999999999999999999999999753


No 60 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.2e-47  Score=418.09  Aligned_cols=282  Identities=32%  Similarity=0.545  Sum_probs=232.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc------CCCCcceeeeEecC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL------RHPDIVEIKHIMLP   88 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L------~HpnIv~l~~v~~~   88 (614)
                      ....+|++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+|+.+      .|+||+++++.+  
T Consensus        94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~--  168 (429)
T 3kvw_A           94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF--  168 (429)
T ss_dssp             EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE--
T ss_pred             cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec--
Confidence            3457899999999999999999999999999999999742   34456677888888877      577999999998  


Q ss_pred             CCCCCCCcEEEEEecCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc--EEEee
Q 007177           89 PSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK--LKICD  164 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~--vKL~D  164 (614)
                         .....+|+|||||+++|.+++....  .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.  +||+|
T Consensus       169 ---~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~D  245 (429)
T 3kvw_A          169 ---TFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVID  245 (429)
T ss_dssp             ---EETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred             ---ccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEee
Confidence               3446799999999999999998754  4999999999999999999999999999999999999999987  99999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++.....      ....+||+.|+|||++.+  ..|+.++||||||||+|||++|.+||.+.+..+++..+...+|.
T Consensus       246 FG~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~  317 (429)
T 3kvw_A          246 FGSSCYEHQR------VYTYIQSRFYRAPEVILG--ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGM  317 (429)
T ss_dssp             CTTCEETTCC------CCSSCSCGGGCCHHHHHT--BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             cccceecCCc------ccccCCCCCccChHHHhC--CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999764322      234689999999999987  67999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccC-----------------------------CCcccCC-CCCCCHHHHHHHHHhcCC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQ-----------------------------PVQFSQK-FPNADPSALRLLERLLAF  294 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~-----------------------------~~~~~~~-~~~~s~~l~dLI~~mL~~  294 (614)
                      |..+.+.....  ...++.......                             ...+... ....++.+.+||.+||++
T Consensus       318 p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~  395 (429)
T 3kvw_A          318 PSQKLLDASKR--AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW  395 (429)
T ss_dssp             CCHHHHHTBTT--HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCS
T ss_pred             CCHHHHHhhhh--hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCC
Confidence            99887654322  122211100000                             0000001 123478899999999999


Q ss_pred             CCCCCCCHHHHHcCcccccC
Q 007177          295 DPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       295 DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      ||++|||++|+|+||||+..
T Consensus       396 dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          396 DPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             STTTSCCHHHHHTSTTTC--
T ss_pred             ChhhCCCHHHHhCChhhccC
Confidence            99999999999999999864


No 61 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.3e-48  Score=409.73  Aligned_cols=291  Identities=32%  Similarity=0.568  Sum_probs=232.2

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      +...++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++     .+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~   95 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----KK   95 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----ec
Confidence            3456799999999999999999999999999999999976555555667788999999999999999999998     45


Q ss_pred             CCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+||||+++ +|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A           96 KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            5679999999996 566666667789999999999999999999999999999999999999999999999999997654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||++|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+..+.+..+....+.........
T Consensus       176 ~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (331)
T 4aaa_A          176 APGE---VYDDEVATRWYRAPELLVGD-VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL  251 (331)
T ss_dssp             -----------CCCCCTTCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             CCcc---ccCCCcCCccccCcccccCC-CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhH
Confidence            3221   12446799999999998762 4689999999999999999999999999999999999988888766544322


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                      ........-...............++.+++.+.+||.+||+.||.+|||++|+|+||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            2111000000000001111222345678999999999999999999999999999999975


No 62 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=7.3e-48  Score=403.59  Aligned_cols=254  Identities=26%  Similarity=0.468  Sum_probs=219.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||++++... .......+.+|+.+|+.++||||+++++++     .+..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence            4689999999999999999999999999999999974311 112345678899999999999999999998     4557


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      .+|+|||||+ ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            7999999998 599999999889999999999999999999999999999999999999999999999999999865332


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                            ....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+..+.+..|...             
T Consensus       160 ------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-------------  218 (318)
T 1fot_A          160 ------TYTLCGTPDYIAPEVVST--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-------------  218 (318)
T ss_dssp             ------BCCCCSCTTTCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC-------------
T ss_pred             ------cccccCCccccCHhHhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence                  134589999999999987  67999999999999999999999999988776655554320             


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                                   .  ..   ..+.+++++.+||.+||..||.+||     +++++++||||+++
T Consensus       219 -------------~--~~---~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          219 -------------E--LR---FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             -------------C--CC---CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             -------------C--CC---CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence                         0  01   1235788999999999999999999     99999999999875


No 63 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=8.5e-49  Score=408.28  Aligned_cols=273  Identities=23%  Similarity=0.236  Sum_probs=195.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      +.+|.+.+.||+|+||+||+|.+  +|+.||||+++..   ........+|+..+..|+|||||++++++.... .....
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~   75 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ   75 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceE
Confidence            46799999999999999999976  6899999999742   122222345666677889999999999985432 12246


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA--------NVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      +|||||||+ |+|.++++.. .++++.+..|+.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence            899999999 6999999765 599999999999999999999987        999999999999999999999999999


Q ss_pred             cccccCCCCCc-cccccccCCccccCcccccccC----CCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhh
Q 007177          168 ARVAFNDTPTT-IFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL  242 (614)
Q Consensus       168 a~~~~~~~~~~-~~~~~~vgt~~Y~APEvl~~~~----~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~  242 (614)
                      |+......... ......+||++|||||++.+..    ..|+.++|||||||+||||++|.+||........        
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~--------  226 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL--------  226 (303)
T ss_dssp             CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC--------
T ss_pred             CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc--------
Confidence            98765433221 1223468999999999986521    1367899999999999999999988755432110        


Q ss_pred             CCCchhhhhhhhchhHHHHHHhhcc-cCCCcccCCC--CCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          243 GTPSLDTISRVRNDKARRYLTSMRK-KQPVQFSQKF--PNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       243 g~p~~~~i~~~~~~~~~~~l~~~~~-~~~~~~~~~~--~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                        |.......  ..........+.. .....+...+  ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus       227 --p~~~~~~~--~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          227 --PYYDLVPS--DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             --TTTTTSCS--SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             --cchhcccc--cchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence              10000000  0000011111111 1111111111  1233568899999999999999999999763


No 64 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.2e-47  Score=406.45  Aligned_cols=283  Identities=22%  Similarity=0.407  Sum_probs=230.4

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-----CCCcceeeeEe
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-----HPDIVEIKHIM   86 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-----HpnIv~l~~v~   86 (614)
                      ......++|++++.||+|+||.||+|.+..+++.||||++..   .........+|+.+|+.+.     ||||+++++++
T Consensus        29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~  105 (360)
T 3llt_A           29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF  105 (360)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred             cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence            334456899999999999999999999999999999999974   2345566778999999997     99999999998


Q ss_pred             cCCCCCCCCcEEEEEecCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC--------
Q 007177           87 LPPSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA--------  156 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~--------  156 (614)
                      .     ....+|+|||||+++|.+++....  .+++..++.|+.||+.||.|||+.||+||||||+|||++.        
T Consensus       106 ~-----~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          106 M-----YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             E-----ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             e-----ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence            4     446799999999889999998754  5999999999999999999999999999999999999975        


Q ss_pred             -----------------CCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHH
Q 007177          157 -----------------NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV  219 (614)
Q Consensus       157 -----------------~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eL  219 (614)
                                       ++.+||+|||+++......      ...+||+.|+|||++.+  ..|+.++|||||||++|+|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el  252 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH------GSIINTRQYRAPEVILN--LGWDVSSDMWSFGCVLAEL  252 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC------CSCCSCGGGCCHHHHTT--CCCCTTHHHHHHHHHHHHH
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCCCC------cCccCcccccCcHHHcC--CCCCCccchHHHHHHHHHH
Confidence                             7889999999998643322      34579999999999987  6799999999999999999


Q ss_pred             HhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccC-----------------CCCCCCH
Q 007177          220 LTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQ-----------------KFPNADP  282 (614)
Q Consensus       220 ltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~s~  282 (614)
                      ++|+.||.+.+..+.+..+....+.+....+..........++.....  ...+..                 .....++
T Consensus       253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  330 (360)
T 3llt_A          253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL--KLAWPENASSINSIKHVKKCLPLYKIIKHE  330 (360)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTT--EECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred             HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccc--eecCcccccchhhhhhhhhcccccccchHH
Confidence            999999999999999999999888877665543322111111000000  000000                 0012347


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          283 SALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       283 ~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                      .+.+||.+||+.||.+|||++|+|+||||+
T Consensus       331 ~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          331 LFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            788999999999999999999999999995


No 65 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=3.4e-48  Score=428.02  Aligned_cols=261  Identities=30%  Similarity=0.493  Sum_probs=223.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+|+.++||||+++++++     .+..
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~   99 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDKG   99 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence            4689999999999999999999999999999999964322 234567788999999999999999999998     4567


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCccccc
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~~  171 (614)
                      .+|+|||||. ++|.+.+.....+++..++.|+.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++..
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            8999999998 5999999998899999999999999999999999999999999999999   56789999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....    .....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+..+.+..+....         
T Consensus       180 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~---------  243 (484)
T 3nyv_A          180 EASK----KMKDKIGTAYYIAPEVLHG---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK---------  243 (484)
T ss_dssp             CCCC----SHHHHTTGGGTCCHHHHHT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------
T ss_pred             cccc----ccccCCCCccccCceeecC---CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC---------
Confidence            4332    1245689999999999875   68999999999999999999999999988776665553311         


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                        .......|..+++.+++||.+||+.||.+|||++|+|+||||+....
T Consensus       244 ------------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          244 ------------------YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             ------------------CCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             ------------------CCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence                              11112234568899999999999999999999999999999987643


No 66 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=3.3e-48  Score=409.49  Aligned_cols=257  Identities=32%  Similarity=0.511  Sum_probs=215.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh-HHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI-SDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~-~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.+..+++.||||++....... .....+.+|+.+|+.++||||+++++++     .+.
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~   81 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTP   81 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence            3478999999999999999999999999999999987432111 1234688999999999999999999998     445


Q ss_pred             CcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           95 KDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..+|+||||++|+|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus        82 ~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           82 TDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             SEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             CEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            67999999999999999988889999999999999999999999999999999999999999999999999999765332


Q ss_pred             CCCccccccccCCccccCcccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y-~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      .    .....+||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+.....                  
T Consensus       162 ~----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------------------  217 (336)
T 3h4j_B          162 N----FLKTSCGSPNYAAPEVING--KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF------------------  217 (336)
T ss_dssp             B----TTCCCTTSTTTSCGGGSCC--SGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB------------------
T ss_pred             c----ccccccCCcCcCCHHHHcC--CCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH------------------
Confidence            2    2345689999999999976  344 78999999999999999999999775432111                  


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                   .............+++.+.+||.+||..||.+|||++|+|+||||+.-
T Consensus       218 -------------~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          218 -------------KKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             -------------CCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             -------------HHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                         000011111223578999999999999999999999999999999853


No 67 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=4.8e-48  Score=409.72  Aligned_cols=260  Identities=24%  Similarity=0.403  Sum_probs=220.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~   92 (614)
                      -..++|++++.||+|+||.||+|.++.+|+.||||++++... .......+.+|..+|+.+ +||||+++++++     .
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~-----~   88 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF-----Q   88 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----E
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----E
Confidence            346789999999999999999999999999999999975311 112345677899999876 899999999998     4


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      +...+|+|||||. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           89 TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            5567999999998 599999998888999999999999999999999999999999999999999999999999999854


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+..+.+..|..           
T Consensus       169 ~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-----------  232 (345)
T 1xjd_A          169 MLGDA---KTNTFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-----------  232 (345)
T ss_dssp             CCTTC---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------
T ss_pred             ccCCC---cccCCCCCcccCChhhhcC--CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-----------
Confidence            32221   1345789999999999987  6799999999999999999999999998887665554421           


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHH-HHHcCcccccCC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAE-EALADPYFKGLS  315 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~-eiL~hp~f~~~~  315 (614)
                                      ..+    .....+++.+.+||.+||..||.+||++. ++++||||+++.
T Consensus       233 ----------------~~~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          233 ----------------DNP----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             ----------------CCC----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             ----------------CCC----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence                            000    11134789999999999999999999998 999999998763


No 68 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=4.7e-47  Score=387.70  Aligned_cols=264  Identities=28%  Similarity=0.495  Sum_probs=226.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++............+.+|+.+++.++||||+++++++     .+...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~   79 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF   79 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCE
Confidence            5789999999999999999999999999999999986655666778889999999999999999999998     45567


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc---EEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~---vKL~DFGla~~~~  172 (614)
                      .|+||||+. ++|.+.+.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.   +||+|||++....
T Consensus        80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            899999998 599999988888999999999999999999999999999999999999987665   9999999997654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ...    ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+...           
T Consensus       160 ~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----------  222 (284)
T 3kk8_A          160 DSE----AWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG-----------  222 (284)
T ss_dssp             SSC----BCCCSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------
T ss_pred             cCc----cccCCCCCcCCcCchhhcC--CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhc-----------
Confidence            322    1244679999999999987  67899999999999999999999999888765555444221           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCccc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE  318 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~  318 (614)
                                      ........+..+++.+.+||.+||+.||.+|||++|+|+||||++.....
T Consensus       223 ----------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          223 ----------------AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             ----------------CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred             ----------------cccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHH
Confidence                            11112233467889999999999999999999999999999998765543


No 69 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.6e-47  Score=403.85  Aligned_cols=267  Identities=22%  Similarity=0.402  Sum_probs=216.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .++|++++.||+|+||.||+|.++.+++.||||++.+.. ........+.+|+.+|+.+ +||||+++++++     .+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeC
Confidence            468999999999999999999999999999999997543 3445567788999999987 899999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            77999999998 59999998888899999999999999999999999999999999999999999999999999986432


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||......+...          .      
T Consensus       163 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----------~------  221 (345)
T 3a8x_A          163 PGD---TTSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD----------Q------  221 (345)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------------------
T ss_pred             CCC---cccccCCCccccCccccCC--CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc----------c------
Confidence            221   2345689999999999987  689999999999999999999999996532111000          0      


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCH------HHHHcCcccccCC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTA------EEALADPYFKGLS  315 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa------~eiL~hp~f~~~~  315 (614)
                        .........+... ...   ....+++.+.+||.+||+.||.+||++      +|+++||||+++.
T Consensus       222 --~~~~~~~~~i~~~-~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          222 --NTEDYLFQVILEK-QIR---IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             ---CHHHHHHHHHHC-CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             --ccHHHHHHHHHcC-CCC---CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence              0000001111111 111   123578999999999999999999995      8999999998753


No 70 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.1e-47  Score=400.83  Aligned_cols=261  Identities=28%  Similarity=0.472  Sum_probs=211.8

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEEC---CCCcEEEEEEecCccC--ChHHHHHHHHHHHHHHhcCCCCcceeeeEec
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKIHDIFE--HISDAARILREIKLLRLLRHPDIVEIKHIML   87 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~---~tg~~vAIK~i~~~~~--~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~   87 (614)
                      +.-..++|++++.||+|+||.||+|.+.   .+|+.||||++++...  .......+.+|+.+|+.++||||+++++++ 
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-   90 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF-   90 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-
Confidence            3445678999999999999999999985   6899999999975422  223455678999999999999999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecC
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG  166 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFG  166 (614)
                          .+.+.+|+|||||+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        91 ----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  166 (327)
T 3a62_A           91 ----QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG  166 (327)
T ss_dssp             ----ECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCS
T ss_pred             ----EcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCC
Confidence                45567999999998 5999999988889999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCc
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS  246 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~  246 (614)
                      +++.......   .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+...     
T Consensus       167 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-----  236 (327)
T 3a62_A          167 LCKESIHDGT---VTHTFCGTIEYMAPEILMR--SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-----  236 (327)
T ss_dssp             CC-------------CTTSSCCTTSCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----
T ss_pred             cccccccCCc---cccccCCCcCccCHhhCcC--CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-----
Confidence            9976432221   1245689999999999977  67899999999999999999999999988776655544321     


Q ss_pred             hhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          247 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       247 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                                           .  .   ...+.+++.+.+||.+||..||.+||     +++|+|+||||+++
T Consensus       237 ---------------------~--~---~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          237 ---------------------K--L---NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             ---------------------C--C---CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             ---------------------C--C---CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence                                 0  0   11245788999999999999999999     89999999999875


No 71 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.6e-47  Score=413.05  Aligned_cols=267  Identities=21%  Similarity=0.396  Sum_probs=214.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++++... .......+.+|..+|+.+ +||||+++++++     .+
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~  124 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QT  124 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----EC
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EE
Confidence            34689999999999999999999999999999999975432 233445678899999877 899999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+|||||. |+|..++...+.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       125 ~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~  204 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  204 (396)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence            577999999998 5999999988899999999999999999999999999999999999999999999999999998633


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+....+....               
T Consensus       205 ~~~~---~~~~~~gt~~Y~aPE~l~~--~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~---------------  264 (396)
T 4dc2_A          205 RPGD---TTSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---------------  264 (396)
T ss_dssp             CTTC---CBCCCCBCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC---------------------
T ss_pred             cCCC---ccccccCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch---------------
Confidence            2222   2355789999999999987  6899999999999999999999999975432111000               


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCH------HHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTA------EEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa------~eiL~hp~f~~~  314 (614)
                         .........+.. ...   .....+++.+.+||++||+.||.+||++      +|+++||||+++
T Consensus       265 ---~~~~~~~~~i~~-~~~---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          265 ---NTEDYLFQVILE-KQI---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             ---CCHHHHHHHHHH-CCC---CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             ---hhHHHHHHHHhc-ccc---CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence               000000111111 111   1223578999999999999999999985      899999999876


No 72 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=3.7e-48  Score=423.20  Aligned_cols=266  Identities=24%  Similarity=0.414  Sum_probs=222.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++.+... .......+.+|+.+|..++||||+++++++     .+.
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-----~~~  146 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-----QDD  146 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-----ECS
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeC
Confidence            34689999999999999999999999999999999974211 111123377899999999999999999998     456


Q ss_pred             CcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..+|||||||. |+|.+++.. .+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~  226 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  226 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence            77999999997 699999987 5689999999999999999999999999999999999999999999999999997654


Q ss_pred             CCCCCccccccccCCccccCccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~---~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ....  ......+||++|+|||++...   ...|+.++|||||||++|||++|++||.+.+..+.+..|....       
T Consensus       227 ~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-------  297 (437)
T 4aw2_A          227 EDGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-------  297 (437)
T ss_dssp             TTSC--EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-------
T ss_pred             cCCC--cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc-------
Confidence            3322  123446899999999998621   1568999999999999999999999999998877776664310       


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCC--CCCHHHHHcCcccccC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKD--RPTAEEALADPYFKGL  314 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~--Rpsa~eiL~hp~f~~~  314 (614)
                                         ....+...+..+++++++||++||..+|++  |++++|+++||||+++
T Consensus       298 -------------------~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          298 -------------------ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             -------------------HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             -------------------ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence                               012233344678999999999999999988  9999999999999875


No 73 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.6e-47  Score=407.00  Aligned_cols=258  Identities=22%  Similarity=0.385  Sum_probs=219.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++++... .......+.+|..+|..+ +||||+++++++     .+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence            35789999999999999999999999999999999975311 112345678899999887 799999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+|||||. |+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~  172 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  172 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence            577999999998 5999999988889999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+..+.+..|...           
T Consensus       173 ~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------  236 (353)
T 2i0e_A          173 WDGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----------  236 (353)
T ss_dssp             CTTC---CBCCCCSCGGGCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             cCCc---ccccccCCccccChhhhcC--CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-----------
Confidence            2221   2245689999999999987  68999999999999999999999999988876665554320           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                                       ...   ....+++++.+||.+||..||.+||     +++++++||||+++
T Consensus       237 -----------------~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          237 -----------------NVA---YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             -----------------CCC---CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             -----------------CCC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence                             011   1235789999999999999999999     47999999999865


No 74 
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3.7e-47  Score=396.16  Aligned_cols=291  Identities=33%  Similarity=0.572  Sum_probs=236.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc---CCCCcceeeeEecCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-HTGEKVAIKKIHDIFEHISDAARILREIKLLRLL---RHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L---~HpnIv~l~~v~~~~~~   91 (614)
                      ..++|++++.||+|+||.||+|.+. .+|+.||||++............+.+|+.+++.+   +||||+++++++.....
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            3478999999999999999999995 6789999999874433222223455777777666   89999999999854333


Q ss_pred             CCCCcEEEEEecCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           92 RDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        92 ~~~~~~ylV~E~~~g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      .....+|+||||++++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            3557799999999999999998754  49999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .....    .......||+.|+|||++.+  ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.|....
T Consensus       169 ~~~~~----~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  242 (326)
T 1blx_A          169 IYSFQ----MALTSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  242 (326)
T ss_dssp             CCCGG----GGGCCCCCCCTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             cccCC----CCccccccccceeCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence            64322    12345679999999999987  5799999999999999999999999999999999999999999887666


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      +........    ..........+...++.+++.+.+||.+||..||.+|||++|+|+||||+++..
T Consensus       243 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          243 WPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             SCTTCSSCG----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             Cccccccch----hhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence            543211100    001112223344556788999999999999999999999999999999997754


No 75 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2e-47  Score=405.67  Aligned_cols=256  Identities=22%  Similarity=0.401  Sum_probs=220.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++++.||+|+||.||+|.++.+|+.||||++.+.. ........+.+|+.+|+.++||||+++++++     .+
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~  112 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KD  112 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----EC
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----Ec
Confidence            34578999999999999999999999999999999996431 1112346788999999999999999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+|||||+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       113 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceecc
Confidence            567999999997 6999999988889999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ...      ...+||+.|+|||++.+  ..|+.++|||||||++|+|++|.+||.+.+..+.+..|...           
T Consensus       193 ~~~------~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------  253 (350)
T 1rdq_E          193 GRT------WTLCGTPEALAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-----------  253 (350)
T ss_dssp             SCB------CCCEECGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCc------ccccCCccccCHHHhcC--CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC-----------
Confidence            321      34589999999999987  67999999999999999999999999988766655554320           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-----HHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-----AEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-----a~eiL~hp~f~~~  314 (614)
                                       ...   ....+++.+.+||.+||+.||.+||+     ++|+++||||+++
T Consensus       254 -----------------~~~---~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          254 -----------------KVR---FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             -----------------CCC---CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             -----------------CCC---CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence                             011   12357899999999999999999998     9999999999865


No 76 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=5.2e-48  Score=409.59  Aligned_cols=260  Identities=29%  Similarity=0.449  Sum_probs=213.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc---CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF---EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~---~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++....   ........+.+|+.+|+.++||||+++++++     .+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~   97 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS   97 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence            357999999999999999999999999999999986321   1111356788999999999999999999998     44


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc---EEEeec
Q 007177           94 FKDIYVVFELME-SDLHQVIKAN----DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDF  165 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~----~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~---vKL~DF  165 (614)
                      ...+|+|||||+ ++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+||
T Consensus        98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Df  177 (351)
T 3c0i_A           98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF  177 (351)
T ss_dssp             TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecC
Confidence            567999999999 5998877542    35899999999999999999999999999999999999987654   999999


Q ss_pred             CccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCC
Q 007177          166 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       166 Gla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      |+++.......   .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|..||.+.+. +.+..+..     
T Consensus       178 g~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~-----  246 (351)
T 3c0i_A          178 GVAIQLGESGL---VAGGRVGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIK-----  246 (351)
T ss_dssp             TTCEECCTTSC---BCCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHH-----
T ss_pred             cceeEecCCCe---eecCCcCCcCccCHHHHcC--CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHc-----
Confidence            99987543321   2245689999999999987  6789999999999999999999999987532 22222211     


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                            .........|+.+++.+.+||.+||..||.+|||++|+|+||||+..
T Consensus       247 ----------------------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          247 ----------------------GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             ----------------------TCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             ----------------------CCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence                                  11111112345688999999999999999999999999999999854


No 77 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=7e-48  Score=416.03  Aligned_cols=291  Identities=34%  Similarity=0.582  Sum_probs=216.6

Q ss_pred             CCCeEE-EeEeeecCceEEEEEEEC--CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKI-QEVIGKGSYGVVCSAIDT--HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i-~~~LG~G~~G~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .+.|++ .++||+|+||.||+|.++  .+++.||||++.....    ...+.+|+.+|+.|+||||+++++++...   +
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~   91 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH---A   91 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEET---T
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecC---C
Confidence            356777 458999999999999966  5788999999975322    23577999999999999999999998542   3


Q ss_pred             CCcEEEEEecCCCcHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE----CCCCcE
Q 007177           94 FKDIYVVFELMESDLHQVIKAN---------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA----NANCKL  160 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~~~---------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi----~~~~~v  160 (614)
                      ...+|||||||+++|.+++...         ..+++..++.|+.||+.||.|||+.||+||||||+|||+    +.++.+
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           92 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            4679999999999999988632         249999999999999999999999999999999999999    677899


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCh---------
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV---------  231 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~---------  231 (614)
                      ||+|||+++...............+||++|+|||++.+. ..|+.++||||||||+|+|++|.+||.+.+.         
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~  250 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH  250 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTC-CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCC-CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence            999999998764432222233557899999999998762 4589999999999999999999999987765         


Q ss_pred             hHHHHHHHhhhCCCchhhhhhhhchhH-HHHHHhhcccCCC--c----ccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 007177          232 VHQLDLMTDLLGTPSLDTISRVRNDKA-RRYLTSMRKKQPV--Q----FSQKFPNADPSALRLLERLLAFDPKDRPTAEE  304 (614)
Q Consensus       232 ~~~l~~i~~~~g~p~~~~i~~~~~~~~-~~~l~~~~~~~~~--~----~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e  304 (614)
                      .+++..|...+|.|....+..+..... .............  .    +.......++.+.+||.+||++||.+|||++|
T Consensus       251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e  330 (405)
T 3rgf_A          251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ  330 (405)
T ss_dssp             HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence            488999999999998877765533211 1111111110000  0    01112344788999999999999999999999


Q ss_pred             HHcCcccccCC
Q 007177          305 ALADPYFKGLS  315 (614)
Q Consensus       305 iL~hp~f~~~~  315 (614)
                      +|+||||+...
T Consensus       331 ~L~hp~f~~~~  341 (405)
T 3rgf_A          331 AMQDPYFLEDP  341 (405)
T ss_dssp             HHTSGGGTSSS
T ss_pred             HhcChhhccCC
Confidence            99999998654


No 78 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=5.6e-47  Score=395.63  Aligned_cols=267  Identities=26%  Similarity=0.437  Sum_probs=225.5

Q ss_pred             cccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhcCCCCcceeeeEe
Q 007177           11 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLLRHPDIVEIKHIM   86 (614)
Q Consensus        11 ~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L~HpnIv~l~~v~   86 (614)
                      +......++|++.+.||+|+||.||+|.++.+|+.||||++.......    .....+.+|+.+|+.++||||+++++++
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   84 (321)
T 2a2a_A            5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY   84 (321)
T ss_dssp             CBCSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            444455678999999999999999999999999999999997542221    1356788999999999999999999998


Q ss_pred             cCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC----cEE
Q 007177           87 LPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC----KLK  161 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~----~vK  161 (614)
                           .+...+|+|||||+ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++    .+|
T Consensus        85 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~k  159 (321)
T 2a2a_A           85 -----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK  159 (321)
T ss_dssp             -----ECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEE
T ss_pred             -----ecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEE
Confidence                 45567999999997 59999999888899999999999999999999999999999999999999888    799


Q ss_pred             EeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhh
Q 007177          162 ICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL  241 (614)
Q Consensus       162 L~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~  241 (614)
                      |+|||+++.......    .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus       160 l~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~  233 (321)
T 2a2a_A          160 LIDFGLAHEIEDGVE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV  233 (321)
T ss_dssp             ECCCTTCEECCTTCC----CCCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT
T ss_pred             EccCccceecCcccc----ccccCCCCCccCcccccC--CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            999999987543321    244579999999999876  67899999999999999999999999988876666555332


Q ss_pred             hCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          242 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       242 ~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      .....                           ...+..+++.+.+||.+||..||.+|||++|+|+||||+...
T Consensus       234 ~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          234 SYDFD---------------------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CCCCC---------------------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             ccccC---------------------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            11111                           112356788999999999999999999999999999998653


No 79 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.4e-47  Score=401.58  Aligned_cols=264  Identities=25%  Similarity=0.379  Sum_probs=215.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++..... ......+.+|+.+++.++||||+++++++     .+..
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~   78 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHR-----REGN   78 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCC
Confidence            35689999999999999999999999999999999864321 22345678999999999999999999998     4556


Q ss_pred             cEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..|+|||||++ +|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             eEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            79999999984 99999988888999999999999999999999999999999999999999999999999999865322


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      .. .......+||+.|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..........              
T Consensus       159 ~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--------------  222 (323)
T 3tki_A          159 NR-ERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK--------------  222 (323)
T ss_dssp             TE-ECCBCSCCSCGGGSCHHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH--------------
T ss_pred             Cc-ccccCCCccCcCccCcHHhccC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--------------
Confidence            21 1223456899999999998762 2347789999999999999999999987654322111100              


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                 ..   ......+..+++.+.+||.+||..||.+|||++|+|+||||+...
T Consensus       223 -----------~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          223 -----------EK---KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             -----------TT---CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             -----------cc---cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence                       00   111122356789999999999999999999999999999998653


No 80 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.4e-47  Score=388.69  Aligned_cols=260  Identities=29%  Similarity=0.482  Sum_probs=200.0

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC-hHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH-ISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .....++|++++.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++     
T Consensus         8 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----   82 (275)
T 2eue_A            8 DGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----   82 (275)
T ss_dssp             CCCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             CCCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----
Confidence            334557899999999999999999999999999999999754322 22356788999999999999999999998     


Q ss_pred             CCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           92 RDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        92 ~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      .+....|+||||++++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus        83 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  162 (275)
T 2eue_A           83 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM  162 (275)
T ss_dssp             ECSSCEEEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred             ecCCeEEEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceec
Confidence            44567999999999999999998889999999999999999999999999999999999999999999999999999765


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....    ....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+.......+...          
T Consensus       163 ~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------  227 (275)
T 2eue_A          163 TDGNF----LKTSCGSPNYAAPEVISGK-LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG----------  227 (275)
T ss_dssp             ----------------CTTCCHHHHCC------THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----------
T ss_pred             cCccc----ccCCCCCcCcCCceeeeCC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----------
Confidence            43221    2345799999999998762 23478999999999999999999999887755444433210          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                        .   ......+++.+.+||.+||+.||.+|||++|+|+||||+.
T Consensus       228 ------------------~---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~  268 (275)
T 2eue_A          228 ------------------V---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             ------------------C---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             ------------------C---CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence                              0   0112357889999999999999999999999999999985


No 81 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.4e-47  Score=403.42  Aligned_cols=292  Identities=33%  Similarity=0.584  Sum_probs=224.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC--CCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR--RDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~--~~~   94 (614)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++....   ....+..+|+..++.++||||+++++++.....  ...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            468999999999999999999999999999999986432   222345678888899999999999999864322  223


Q ss_pred             CcEEEEEecCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHH--hCCeEeecCCCCcEEECC-CCcEEEeecCc
Q 007177           95 KDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIH--TANVYHRDLKPKNILANA-NCKLKICDFGL  167 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~----~~~~lse~~~~~i~~QIl~aL~yLH--s~gIvHrDLKP~NILi~~-~~~vKL~DFGl  167 (614)
                      ..+|+|||||+++|.+.+.    ....+++..++.++.||+.||.|||  +.||+||||||+|||++. ++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~  178 (360)
T 3e3p_A           99 IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGS  178 (360)
T ss_dssp             EEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             eeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence            3488999999998776654    4567999999999999999999999  999999999999999996 89999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      ++.......    ....+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...++.|..
T Consensus       179 a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          179 AKKLSPSEP----NVAYICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CBCCCTTSC----CCSTTSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ceecCCCCC----cccccCCcceeCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            986543322    2346789999999998652 45899999999999999999999999999999999999999999988


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCC----CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCcccC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQK----FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVER  319 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~~  319 (614)
                      +.+..+.......   .........+...    ....++.+.+||.+||+.||.+|||+.|+|+||||+++.....
T Consensus       254 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  326 (360)
T 3e3p_A          254 EVLRKLNPSHTDV---DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPAT  326 (360)
T ss_dssp             HHHHHHCTTCCCG---GGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred             HHHHhcccchhhc---cccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccc
Confidence            7765543211000   0001111122222    2236789999999999999999999999999999998865443


No 82 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.8e-47  Score=409.56  Aligned_cols=263  Identities=25%  Similarity=0.454  Sum_probs=218.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++.+.. ........+.+|+.+|+.++||||+++++++     .+.
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~   87 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDE   87 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence            4578999999999999999999999999999999986431 1122346788999999999999999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+|||||. |+|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            67999999997 59999999988999999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..    .....+||+.|+|||++.+. ...|+.++|||||||++|+|++|..||.+.+.......+.             
T Consensus       168 ~~----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-------------  230 (384)
T 4fr4_A          168 ET----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-------------  230 (384)
T ss_dssp             TC----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-------------
T ss_pred             CC----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-------------
Confidence            22    23557899999999998642 1458999999999999999999999998654322211110             


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-HHHHHcCcccccCC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-AEEALADPYFKGLS  315 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-a~eiL~hp~f~~~~  315 (614)
                                 .+.. ..   ......+++.+.+||.+||+.||.+||+ ++++++||||+++.
T Consensus       231 -----------~~~~-~~---~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          231 -----------TFET-TV---VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             -----------HHHH-CC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             -----------HHhh-cc---cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence                       0000 01   1122457899999999999999999998 99999999998763


No 83 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.9e-47  Score=403.04  Aligned_cols=257  Identities=29%  Similarity=0.454  Sum_probs=213.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||||++.+...      ...+|+.+|..+ +||||+++++++     .+..
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~   89 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVY-----DDGK   89 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEE-----ECSS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEE-----EcCC
Confidence            4579999999999999999999999999999999975432      234688888877 799999999998     4567


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC----CcEEEeecCcccc
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN----CKLKICDFGLARV  170 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~----~~vKL~DFGla~~  170 (614)
                      .+|+|||||+ ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+..+    +.+||+|||+++.
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            8999999998 5999999988899999999999999999999999999999999999998543    3599999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCh---hHHHHHHHhhhCCCch
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV---VHQLDLMTDLLGTPSL  247 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~---~~~l~~i~~~~g~p~~  247 (614)
                      ......   .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|.+||.+...   .+.+..+         
T Consensus       170 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i---------  235 (342)
T 2qr7_A          170 LRAENG---LLMTPCYTANFVAPEVLER--QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI---------  235 (342)
T ss_dssp             CBCTTC---CBCCSSCCSSCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH---------
T ss_pred             CcCCCC---ceeccCCCccccCHHHhcC--CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH---------
Confidence            543322   1245689999999999876  5688999999999999999999999976432   1122111         


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                        ...........|+.+++.+++||.+||..||++|||++++|+||||.++..
T Consensus       236 ------------------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~  286 (342)
T 2qr7_A          236 ------------------GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ  286 (342)
T ss_dssp             ------------------HHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGG
T ss_pred             ------------------ccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccc
Confidence                              111222223456789999999999999999999999999999999987543


No 84 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=7.8e-47  Score=402.40  Aligned_cols=262  Identities=28%  Similarity=0.414  Sum_probs=204.2

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ....++|++++.||+|+||.||+|.++.+++.||||++.....   ....+.+|+.+++.++||||+++++++.     +
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~   87 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVIL-----T   87 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEe-----e
Confidence            4567899999999999999999999999999999999975322   2245779999999999999999999984     4


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc--EEEeecCcccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK--LKICDFGLARV  170 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~--vKL~DFGla~~  170 (614)
                      ...+|+|||||. ++|.+++...+.+++..++.|+.||+.||.|||++||+||||||+|||++.++.  +||+|||+++.
T Consensus        88 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            567999999997 599999988888999999999999999999999999999999999999987765  99999999975


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCC-cccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~-~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .....    .....+||++|+|||++.+  ..++. ++|||||||++|+|++|+.||.+.+....+..+..         
T Consensus       168 ~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~---------  232 (361)
T 3uc3_A          168 SVLHS----QPKSTVGTPAYIAPEVLLR--QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ---------  232 (361)
T ss_dssp             -----------------CTTSCHHHHHC--SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH---------
T ss_pred             ccccC----CCCCCcCCCCcCChhhhcC--CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH---------
Confidence            32221    1234579999999999876  45554 49999999999999999999987654322222111         


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                    .+... ...+ .....+++.+.+||.+||+.||.+|||++|+|+||||...
T Consensus       233 --------------~~~~~-~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          233 --------------RILSV-KYSI-PDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             --------------HHHTT-CCCC-CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             --------------HHhcC-CCCC-CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                          00000 0001 1123578999999999999999999999999999999654


No 85 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=7e-47  Score=395.11  Aligned_cols=288  Identities=31%  Similarity=0.598  Sum_probs=226.1

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSR   91 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~   91 (614)
                      +++..++|++++.||+|+||.||+|.+..+++.||||+++..     ....+.+|+.+|+.++ ||||+++++++...  
T Consensus        31 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--  103 (330)
T 3nsz_A           31 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP--  103 (330)
T ss_dssp             CCEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT--
T ss_pred             cccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccC--
Confidence            455668999999999999999999999999999999999742     2456889999999997 99999999998542  


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC-cEEEeecCccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLAR  169 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~-~vKL~DFGla~  169 (614)
                       .....|+||||+. ++|.+++.   .+++..++.++.||+.||.|||+.||+||||||+|||++.++ .+||+|||+++
T Consensus       104 -~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          104 -VSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             -TTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             -CCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence             2467899999999 58888874   499999999999999999999999999999999999999777 89999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCC-CCCChhHHHHHHHhhhCCCchh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF-PGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF-~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      .......    ....++|+.|+|||++.+. ..++.++|||||||++|+|++|..|| .+.+..+++..+...++.+...
T Consensus       180 ~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~  254 (330)
T 3nsz_A          180 FYHPGQE----YNVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY  254 (330)
T ss_dssp             ECCTTCC----CCSCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHH
T ss_pred             EcCCCCc----cccccccccccChhhhcCC-CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhh
Confidence            6543322    2345799999999998653 56899999999999999999999888 5566777888887777754332


Q ss_pred             hhh-hhhchhHHHHHHhhcccCCCcccCC-----CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          249 TIS-RVRNDKARRYLTSMRKKQPVQFSQK-----FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       249 ~i~-~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      ... .........+...........+...     ...+++.+.+||.+||+.||.+|||++|+|+||||+++.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            211 1110001111111111111112111     1237899999999999999999999999999999997653


No 86 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.8e-47  Score=407.06  Aligned_cols=259  Identities=27%  Similarity=0.454  Sum_probs=212.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHH-HHhcCCCCcceeeeEecCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKL-LRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~i-L~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ...++|++++.||+|+||.||+|.++.+++.||||++++... .......+.+|..+ ++.++||||+++++++     .
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~  109 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----Q  109 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----E
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----E
Confidence            345789999999999999999999999999999999975432 23345567778776 5778999999999998     4


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      +...+|+|||||. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+++..
T Consensus       110 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          110 TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            5578999999998 599999998888999999999999999999999999999999999999999999999999999864


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+..+.+..|...          
T Consensus       190 ~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----------  254 (373)
T 2r5t_A          190 IEHNS---TTSTFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK----------  254 (373)
T ss_dssp             BCCCC---CCCSBSCCCCCCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS----------
T ss_pred             ccCCC---ccccccCCccccCHHHhCC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc----------
Confidence            33222   1245689999999999987  68999999999999999999999999988876665554320          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCH----HHHHcCcccccC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTA----EEALADPYFKGL  314 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa----~eiL~hp~f~~~  314 (614)
                                        ..   ...+.+++.+.+||.+||+.||.+||++    +++++||||+++
T Consensus       255 ------------------~~---~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          255 ------------------PL---QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             ------------------CC---CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             ------------------cc---CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence                              11   1124678999999999999999999986    799999999875


No 87 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=7.3e-47  Score=406.80  Aligned_cols=258  Identities=27%  Similarity=0.442  Sum_probs=220.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++...  ...+...+.+|+.+|+.|+||||+++++++     .+...
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~  122 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYE  122 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCE
Confidence            46899999999999999999999999999999999753  234556788999999999999999999998     45577


Q ss_pred             EEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC--CCcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA--NCKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~--~~~vKL~DFGla~~~~  172 (614)
                      +|+|||||. ++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++.  ++.+||+|||+++...
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            999999998 59999987654 7999999999999999999999999999999999999974  4679999999998754


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+...           
T Consensus       203 ~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~-----------  265 (387)
T 1kob_A          203 PDEI----VKVTTATAEFAAPEIVDR--EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC-----------  265 (387)
T ss_dssp             TTSC----EEEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCcc----eeeeccCCCccCchhccC--CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------
Confidence            3321    234579999999999987  67899999999999999999999999998876665554321           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                      ........+..+++.+.+||.+||..||.+|||++|+|+||||++.
T Consensus       266 ----------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          266 ----------------DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             ----------------CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ----------------CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence                            1111123456789999999999999999999999999999999864


No 88 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.3e-47  Score=415.73  Aligned_cols=265  Identities=25%  Similarity=0.365  Sum_probs=219.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++++.||+|+||.||+|.++.+++.||+|++++... .......+.+|+.+|+.++||||+++++++     .+
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~  140 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QD  140 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EE
Confidence            345789999999999999999999999999999999964210 111223477899999999999999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|||||||+ |+|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence            677999999997 5999998764 69999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCC--CCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFS--KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~--~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ...  .......+||+.|+|||++.+...  .|+.++|||||||++|||++|++||.+.+..+.+..|.....       
T Consensus       220 ~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-------  290 (410)
T 3v8s_A          220 KEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN-------  290 (410)
T ss_dssp             TTS--EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-------
T ss_pred             cCC--cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc-------
Confidence            322  112345789999999999876211  278999999999999999999999999887777666643100       


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCC--CCCHHHHHcCcccccC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKD--RPTAEEALADPYFKGL  314 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~--Rpsa~eiL~hp~f~~~  314 (614)
                                         ...+ ..+..+++++++||.+||..+|.+  |++++|+++||||+++
T Consensus       291 -------------------~~~~-p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          291 -------------------SLTF-PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             -------------------HCCC-CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             -------------------cccC-CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence                               0001 123468999999999999999988  9999999999999975


No 89 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.6e-47  Score=390.89  Aligned_cols=261  Identities=25%  Similarity=0.471  Sum_probs=209.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC------------------------hHHHHHHHHHHHHH
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH------------------------ISDAARILREIKLL   71 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~------------------------~~~~~~i~~Ei~iL   71 (614)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++......                        ......+.+|+.+|
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            357899999999999999999999999999999998643211                        11235688999999


Q ss_pred             HhcCCCCcceeeeEecCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCC
Q 007177           72 RLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK  150 (614)
Q Consensus        72 ~~L~HpnIv~l~~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~  150 (614)
                      +.++||||+++++++...   ....+|+|||||+ ++|.+++ ....+++..++.++.||+.||.|||+.||+||||||+
T Consensus        91 ~~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~  166 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPS  166 (298)
T ss_dssp             HTCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             HhCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence            999999999999998542   2467999999998 5777654 3457999999999999999999999999999999999


Q ss_pred             cEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 007177          151 NILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFS-KYTPAIDIWSIGCIFAEVLTGKPLFPGK  229 (614)
Q Consensus       151 NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~-~y~~~~DIWSLG~Il~eLltG~~pF~g~  229 (614)
                      |||++.++.+||+|||+++.......   .....+||+.|+|||++.+... .++.++|||||||++|+|++|..||.+.
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSC---EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HEEECCCCCEEEecCCCccccccccc---cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999986543221   2345689999999999876311 1477899999999999999999999887


Q ss_pred             ChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCc
Q 007177          230 NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP  309 (614)
Q Consensus       230 ~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp  309 (614)
                      +.......+..                          .  ...+ ...+.+++.+.+||.+||+.||.+|||++|+|+||
T Consensus       244 ~~~~~~~~~~~--------------------------~--~~~~-~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp  294 (298)
T 2zv2_A          244 RIMCLHSKIKS--------------------------Q--ALEF-PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP  294 (298)
T ss_dssp             SHHHHHHHHHH--------------------------C--CCCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred             cHHHHHHHHhc--------------------------c--cCCC-CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence            65443332211                          0  0011 12356889999999999999999999999999999


Q ss_pred             ccc
Q 007177          310 YFK  312 (614)
Q Consensus       310 ~f~  312 (614)
                      ||+
T Consensus       295 ~~~  297 (298)
T 2zv2_A          295 WVT  297 (298)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            996


No 90 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=9.6e-47  Score=392.63  Aligned_cols=252  Identities=27%  Similarity=0.310  Sum_probs=208.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCCCc
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      ++|++++.||+|+||.||+|.++.+|+.||||++..............+|+..+..+ +||||+++++++     .+.+.
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~~~~  131 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EEGGI  131 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----EeCCE
Confidence            579999999999999999999999999999999887656666666777777776655 899999999998     45567


Q ss_pred             EEEEEecCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           97 IYVVFELMESDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        97 ~ylV~E~~~g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      +|+|||||+++|.+++... ..+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus       132 ~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          132 LYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             EEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence            9999999999999988764 469999999999999999999999999999999999999999999999999997654322


Q ss_pred             CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhc
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN  255 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~  255 (614)
                      .    .....||+.|+|||++.+   .++.++|||||||++|||++|..||.+......+   ..               
T Consensus       212 ~----~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~---~~---------------  266 (311)
T 3p1a_A          212 A----GEVQEGDPRYMAPELLQG---SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL---RQ---------------  266 (311)
T ss_dssp             -------CCCCCGGGCCGGGGGT---CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHH---TT---------------
T ss_pred             C----CcccCCCccccCHhHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH---hc---------------
Confidence            2    234579999999999875   6899999999999999999998777554322111   00               


Q ss_pred             hhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          256 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       256 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                 ..   ........+++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       267 -----------~~---~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          267 -----------GY---LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             -----------TC---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             -----------cC---CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                       00   001112457899999999999999999999999999999974


No 91 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3e-47  Score=399.55  Aligned_cols=263  Identities=26%  Similarity=0.465  Sum_probs=195.1

Q ss_pred             CeEEE---eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCCCCC
Q 007177           19 RYKIQ---EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        19 rY~i~---~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~~~~   94 (614)
                      +|++.   +.||+|+||.||+|.++.+++.||||++...     ....+.+|+.+|+.+. ||||+++++++     .+.
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~   78 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQ   78 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcC
Confidence            46664   7899999999999999999999999999742     3456778999999997 99999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC---cEEEeecCcccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC---KLKICDFGLARV  170 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~---~vKL~DFGla~~  170 (614)
                      ..+|+|||||+ ++|.+++.....+++..++.|+.||+.||.|||++||+||||||+|||++.++   .+||+|||+++.
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~  158 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL  158 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred             CEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence            77999999998 59999999998999999999999999999999999999999999999997765   899999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......   .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|..||.+.+.....               
T Consensus       159 ~~~~~~---~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---------------  218 (325)
T 3kn6_A          159 KPPDNQ---PLKTPCFTLHYAAPELLNQ--NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC---------------  218 (325)
T ss_dssp             CCC---------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C---------------
T ss_pred             cCCCCC---cccccCCCcCccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc---------------
Confidence            433221   2345678999999999987  67999999999999999999999999875431100               


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                           ......+..+...........|..+++++++||.+||..||.+|||++|+|+||||++...
T Consensus       219 -----~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          219 -----TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             -----CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             -----ccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence                 0001111222222222222334568999999999999999999999999999999987543


No 92 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-47  Score=413.33  Aligned_cols=266  Identities=23%  Similarity=0.353  Sum_probs=218.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      -..++|++++.||+|+||.||+|.++.+|+.||||++++.. ........+.+|+.+|..++||||+++++++     .+
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-----~~  132 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF-----QD  132 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE-----EC
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ee
Confidence            34578999999999999999999999999999999997421 1112234477899999999999999999998     55


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ...+|||||||. |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+++..
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheec
Confidence            678999999997 6999999874 47999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCccccccccCCccccCccccccc-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCc
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS  246 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~-----~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~  246 (614)
                      .....  ......+||+.|+|||++...     ...|+.++|||||||++|||++|++||.+.+..+.+..|....    
T Consensus       213 ~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~----  286 (412)
T 2vd5_A          213 RADGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK----  286 (412)
T ss_dssp             CTTSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH----
T ss_pred             cCCCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc----
Confidence            43322  112346899999999998621     1468999999999999999999999999988777666654210    


Q ss_pred             hhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCC---CCHHHHHcCcccccC
Q 007177          247 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR---PTAEEALADPYFKGL  314 (614)
Q Consensus       247 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~R---psa~eiL~hp~f~~~  314 (614)
                                            ....+......+++++++||++||. ||.+|   ++++|+++||||+++
T Consensus       287 ----------------------~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          287 ----------------------EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             ----------------------HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ----------------------cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence                                  0011112234688999999999999 99998   599999999999876


No 93 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3.3e-47  Score=416.21  Aligned_cols=258  Identities=26%  Similarity=0.458  Sum_probs=211.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++.... ........+.+|+.+|+.++||||+++++++     .+.
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeC
Confidence            3468999999999999999999999999999999997432 2233456678999999999999999999998     445


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +.+|||||||+ ++|.+++.....+++..++.|+.||+.||.|||+ .||+||||||+|||++.++.+||+|||+++...
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             CEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            67999999998 5999999888899999999999999999999998 999999999999999999999999999998643


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|+.||.+.+.......+...           
T Consensus       301 ~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------  364 (446)
T 4ejn_A          301 KDGA---TMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------  364 (446)
T ss_dssp             C--------CCSSSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCCc---ccccccCCccccCHhhcCC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-----------
Confidence            2221   2345789999999999977  68999999999999999999999999988766555544210           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                                       ..   .....+++.+.+||.+||+.||.+||     +++|+|+||||+++
T Consensus       365 -----------------~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          365 -----------------EI---RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             -----------------CC---CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -----------------CC---CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence                             00   11235789999999999999999999     99999999999976


No 94 
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=3.5e-46  Score=389.31  Aligned_cols=284  Identities=31%  Similarity=0.531  Sum_probs=230.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEE-CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC------cceeeeEec
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAID-THTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD------IVEIKHIML   87 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d-~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn------Iv~l~~v~~   87 (614)
                      ...++|++++.||+|+||.||+|.+ ..+++.||||+++..   ......+.+|+.+++.++|++      |+++++++ 
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~-   86 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF-   86 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-
Confidence            3467999999999999999999998 568899999999742   345567889999999887654      99999988 


Q ss_pred             CCCCCCCCcEEEEEecCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC---------
Q 007177           88 PPSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA---------  156 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~---------  156 (614)
                          .+.+.+|+|||||+++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.         
T Consensus        87 ----~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           87 ----EHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             ----EETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             ----ccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence                4456799999999989999998765  6899999999999999999999999999999999999987         


Q ss_pred             ----------CCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCC
Q 007177          157 ----------NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF  226 (614)
Q Consensus       157 ----------~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF  226 (614)
                                ++.+||+|||+++......      ...+||+.|+|||++.+  ..++.++|||||||++|+|++|..||
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf  234 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEHH------STLVSTRHYRAPEVILA--LGWSQPCDVWSIGCILIEYYLGFTVF  234 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSCC------CSSCSCGGGCCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccccccccccCCCceEeeCcccccCcccc------ccccCCccccChHHhhC--CCCCcchhhHHHHHHHHHHHhCCCCC
Confidence                      6689999999998643221      34579999999999987  67999999999999999999999999


Q ss_pred             CCCChhHHHHHHHhhhCCCchhhhhhhhch--------------hHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhc
Q 007177          227 PGKNVVHQLDLMTDLLGTPSLDTISRVRND--------------KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLL  292 (614)
Q Consensus       227 ~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL  292 (614)
                      .+.+..+.+..+....+.+....+......              ....+..... .....+.......++.+.+||.+||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~L  313 (339)
T 1z57_A          235 PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC-KPLKEFMLSQDVEHERLFDLIQKML  313 (339)
T ss_dssp             CCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC-CCGGGGCSCCSHHHHHHHHHHHHHT
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC-cchhhhcccchhhHHHHHHHHHHHh
Confidence            999999999999988888776665443211              0111111110 0111111112234578899999999


Q ss_pred             CCCCCCCCCHHHHHcCcccccCC
Q 007177          293 AFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       293 ~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      +.||.+|||++|+|+||||+.+.
T Consensus       314 ~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          314 EYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             CSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             CcCcccccCHHHHhcCHHHHHHh
Confidence            99999999999999999998754


No 95 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.6e-46  Score=385.50  Aligned_cols=257  Identities=30%  Similarity=0.489  Sum_probs=210.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.++.++..||+|++..... ......+.+|+.+|+.++||||+++++++     .+..
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~   93 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYH   93 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCC
Confidence            34689999999999999999999999999999999975432 23456788999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCc
Q 007177           96 DIYVVFELME-SDLHQVIKA----NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGL  167 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~----~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGl  167 (614)
                      .+|+|||||+ ++|.+.+..    ...+++..++.|+.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence            7999999998 499988854    3679999999999999999999999999999999999999   4567899999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      +........    .....||+.|+|||++.+   .++.++|||||||++|+|++|..||.+.+..+....+..       
T Consensus       174 a~~~~~~~~----~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~-------  239 (285)
T 3is5_A          174 AELFKSDEH----STNAAGTALYMAPEVFKR---DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY-------  239 (285)
T ss_dssp             CCC--------------CTTGGGCCHHHHTT---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------
T ss_pred             ceecCCccc----CcCcccccCcCChHHhcc---CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc-------
Confidence            976543221    234579999999999864   689999999999999999999999988775444333211       


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                           ....+......+++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       240 ---------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          240 ---------------------KEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             ---------------------CCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ---------------------CCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                                 011111223457899999999999999999999999999999975


No 96 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=2.2e-46  Score=381.66  Aligned_cols=258  Identities=31%  Similarity=0.476  Sum_probs=220.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.++.++..||+|++.....  .....+.+|+.+|+.++||||+++++++     .+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~   79 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNT   79 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCC
Confidence            34679999999999999999999999999999999975432  2356788999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCccccc
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~~  171 (614)
                      .+|+|||||+ ++|.+.+.....+++..++.|+.||+.||.|||+.||+||||||+|||+   +.++.+||+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence            7999999998 5999999888889999999999999999999999999999999999999   78889999999999765


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....    ......||+.|+|||++.+   .++.++|||||||++|+|++|..||.+.+..+....+.......      
T Consensus       160 ~~~~----~~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------  226 (277)
T 3f3z_A          160 KPGK----MMRTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTF------  226 (277)
T ss_dssp             CTTS----CBCCCCSCTTTCCHHHHTT---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------
T ss_pred             cCcc----chhccCCCCCccChHHhcc---cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC------
Confidence            4322    1244579999999999875   58999999999999999999999999887766655543321111      


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           ....+..+++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus       227 ---------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          227 ---------------------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             ---------------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             ---------------------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence                                 112234678999999999999999999999999999999854


No 97 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=4.3e-46  Score=382.46  Aligned_cols=262  Identities=25%  Similarity=0.349  Sum_probs=219.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .....|++.+.||+|+||.||+|.+..++..||+|++............+.+|+.+|+.++||||+++++++.... .+.
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~  101 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGK  101 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSC
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCC
Confidence            4456799999999999999999999999999999999876666677888999999999999999999999875432 345


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEEC-CCCcEEEeecCcccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILAN-ANCKLKICDFGLARV  170 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~-~~~~vKL~DFGla~~  170 (614)
                      ..+|+||||++ ++|.+++.....+++..++.|+.||+.||.|||+.|  |+||||||+|||++ .++.+||+|||++..
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             ceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            67999999997 599999998888999999999999999999999999  99999999999998 788999999999975


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      .....     .....||+.|+|||++.+   .++.++|||||||++|+|++|..||.+......+......         
T Consensus       182 ~~~~~-----~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---------  244 (290)
T 1t4h_A          182 KRASF-----AKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS---------  244 (290)
T ss_dssp             CCTTS-----BEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT---------
T ss_pred             ccccc-----cccccCCcCcCCHHHHhc---cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc---------
Confidence            43221     234579999999998874   6899999999999999999999999876544333221110         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                      ...+   .......++.+.+||.+||..||.+|||++|+|+||||++
T Consensus       245 ----------------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          245 ----------------GVKP---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------------TCCC---GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------------cCCc---cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                            0001   1112345689999999999999999999999999999985


No 98 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.5e-46  Score=398.20  Aligned_cols=257  Identities=27%  Similarity=0.452  Sum_probs=203.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++.+.||+|+||.||+|.++.+++.||||++...    .....+.+|+.+|+.++||||+++++++     .+...
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~  122 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTE  122 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCe
Confidence            46799999999999999999999999999999999753    2345677899999999999999999998     44567


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC---CCcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~---~~~vKL~DFGla~~~~  172 (614)
                      +|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+++...
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            999999998 599999988888999999999999999999999999999999999999975   8899999999998653


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~-~l~~i~~~~g~p~~~~i~  251 (614)
                      ...    .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+..... .+..+.            
T Consensus       203 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~------------  264 (349)
T 2w4o_A          203 HQV----LMKTVCGTPGYCAPEILRG--CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL------------  264 (349)
T ss_dssp             --------------CGGGSCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHH------------
T ss_pred             ccc----ccccccCCCCccCHHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHH------------
Confidence            322    1244679999999999987  679999999999999999999999997765433 222221            


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                     ..........++.++..+.+||.+||..||++|||++|+|+||||.+..
T Consensus       265 ---------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          265 ---------------NCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             ---------------TTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             ---------------hCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                           1111222344567899999999999999999999999999999998643


No 99 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-46  Score=395.79  Aligned_cols=268  Identities=29%  Similarity=0.451  Sum_probs=216.0

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc---CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF---EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~---~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|++++.||+|+||.||+|.+..+++.||||++....   ........+.+|+.+|+.++||||+++++++     .+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~   99 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY-----ED   99 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh-----cc
Confidence            467999999999999999999999999999999986431   1234567889999999999999999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHh----------------------------------------CCCCCHHHHHHHHHHHHH
Q 007177           94 FKDIYVVFELME-SDLHQVIKA----------------------------------------NDDLTREHYQFFLYQLLR  132 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~----------------------------------------~~~lse~~~~~i~~QIl~  132 (614)
                      ...+|+|||||+ ++|.+++..                                        ...+++..++.|+.||+.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            567999999997 699998842                                        112467889999999999


Q ss_pred             HHHHHHhCCeEeecCCCCcEEECCCC--cEEEeecCccccccCCCC-CccccccccCCccccCcccccccCCCCCCcccc
Q 007177          133 ALKYIHTANVYHRDLKPKNILANANC--KLKICDFGLARVAFNDTP-TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDI  209 (614)
Q Consensus       133 aL~yLHs~gIvHrDLKP~NILi~~~~--~vKL~DFGla~~~~~~~~-~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DI  209 (614)
                      ||.|||+.||+||||||+|||++.++  .+||+|||+++....... .........||+.|+|||++.+....++.++||
T Consensus       180 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di  259 (345)
T 3hko_A          180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA  259 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred             HHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence            99999999999999999999998776  899999999986543221 111234567999999999986543578999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHH
Q 007177          210 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLE  289 (614)
Q Consensus       210 WSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~  289 (614)
                      |||||++|+|++|..||.+.+..+.+..+....                           .......+..+++.+.+||.
T Consensus       260 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~li~  312 (345)
T 3hko_A          260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK---------------------------LCFENPNYNVLSPLARDLLS  312 (345)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------------------------CCTTSGGGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc---------------------------cccCCcccccCCHHHHHHHH
Confidence            999999999999999999988766655543211                           11111223457889999999


Q ss_pred             HhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          290 RLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       290 ~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      +||+.||.+|||+.++|+||||+++..
T Consensus       313 ~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          313 NLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHcCCChhHCCCHHHHhcChhhccChH
Confidence            999999999999999999999997654


No 100
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=2.5e-46  Score=412.84  Aligned_cols=262  Identities=29%  Similarity=0.482  Sum_probs=220.9

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ......++|.+++.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+|+.++||||+++++++    
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~----   85 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI----   85 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE----
Confidence            334456799999999999999999999999999999999974311 112345788999999999999999999998    


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                       .+...+|+|||||+ ++|.+++..++.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        86 -~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~  164 (476)
T 2y94_A           86 -STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN  164 (476)
T ss_dssp             -ECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             -EECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchh
Confidence             44567999999997 5999999888899999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ......    .....+||+.|+|||++.+. ..++.++||||||||+|+|++|..||.+.+....+..+....       
T Consensus       165 ~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-------  232 (476)
T 2y94_A          165 MMSDGE----FLRTSCGSPNYAAPEVISGR-LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI-------  232 (476)
T ss_dssp             ECCTTC----CBCCCCSCSTTCCHHHHTTC-CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-------
T ss_pred             hccccc----cccccCCCcCeEChhhccCC-CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-------
Confidence            754322    23456899999999999862 234789999999999999999999998877655554442210       


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           .   .....+++.+.+||.+||..||.+|||++|+++||||+..
T Consensus       233 ---------------------~---~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          233 ---------------------F---YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             ---------------------C---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             ---------------------c---CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                                 0   1113478899999999999999999999999999999864


No 101
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=4.7e-46  Score=397.66  Aligned_cols=283  Identities=27%  Similarity=0.406  Sum_probs=225.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC--------CCCcceeeeEecC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR--------HPDIVEIKHIMLP   88 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~--------HpnIv~l~~v~~~   88 (614)
                      .++|++++.||+|+||.||+|.+..+++.||||++..   .......+.+|+.+|+.++        ||||+++++.+..
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            4799999999999999999999999999999999974   2345667889999999986        7889999998853


Q ss_pred             CCCCCCCcEEEEEecCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCC-------
Q 007177           89 PSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANC-------  158 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~-------  158 (614)
                      .. .+...+|+|||||+++|.+.+...  ..+++..++.|+.||+.||.|||++ ||+||||||+|||++.++       
T Consensus       113 ~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          113 SG-VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             EE-TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             cC-CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence            21 244679999999999888888664  4699999999999999999999998 999999999999999775       


Q ss_pred             ------------------------------------------cEEEeecCccccccCCCCCccccccccCCccccCcccc
Q 007177          159 ------------------------------------------KLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC  196 (614)
Q Consensus       159 ------------------------------------------~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl  196 (614)
                                                                .+||+|||+++.....      ....+||+.|+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGGCCHHHH
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCCcccCChhh
Confidence                                                      7999999999865432      2345799999999999


Q ss_pred             cccCCCCCCcccchhHHHHHHHHHhCCCCCCCCC------hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCC
Q 007177          197 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN------VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQP  270 (614)
Q Consensus       197 ~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~------~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~  270 (614)
                      .+  ..|+.++|||||||++|+|++|..||.+.+      ..+++..+...+|.+....+......  ..++........
T Consensus       266 ~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~  341 (397)
T 1wak_A          266 IG--SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS--KEFFTKKGDLKH  341 (397)
T ss_dssp             HT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG--GGTBCTTSSBSS
T ss_pred             cC--CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc--ccccCCcccccc
Confidence            87  579999999999999999999999998765      56788889999998877655322111  000000000000


Q ss_pred             Ccc-------------cCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          271 VQF-------------SQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       271 ~~~-------------~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                      ..-             .......++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            000             0001123467899999999999999999999999999973


No 102
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1e-45  Score=396.09  Aligned_cols=280  Identities=32%  Similarity=0.531  Sum_probs=226.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CC-----CcceeeeEecCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HP-----DIVEIKHIMLPPS   90 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-Hp-----nIv~l~~v~~~~~   90 (614)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++.   .......+.+|+.+++.++ |+     +|+.+++.+.   
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---  126 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM---  126 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE---
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec---
Confidence            4789999999999999999999999999999999974   2344566778999998885 55     3899999883   


Q ss_pred             CCCCCcEEEEEecCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH--hCCeEeecCCCCcEEEC--CCCcEEEee
Q 007177           91 RRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIH--TANVYHRDLKPKNILAN--ANCKLKICD  164 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLH--s~gIvHrDLKP~NILi~--~~~~vKL~D  164 (614)
                        ....+|||||||+++|.+++...  ..+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||+|
T Consensus       127 --~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          127 --FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             --ETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             --cCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence              44679999999999999999875  46999999999999999999999  57999999999999995  477899999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++.....      ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|++||.+.+..+++..|...++.
T Consensus       205 FG~a~~~~~~------~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  276 (382)
T 2vx3_A          205 FGSSCQLGQR------IYQYIQSRFYRSPEVLLG--MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI  276 (382)
T ss_dssp             CTTCEETTCC------CCSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             ccCceecccc------cccccCCccccChHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            9999875332      234689999999999987  57999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCC---------Cccc-CCC------------------C-------CCCHHHHHHHH
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQP---------VQFS-QKF------------------P-------NADPSALRLLE  289 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~---------~~~~-~~~------------------~-------~~s~~l~dLI~  289 (614)
                      |....+....  ....++..+.....         ..+. ...                  .       ..++.+++||.
T Consensus       277 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  354 (382)
T 2vx3_A          277 PPAHILDQAP--KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLIL  354 (382)
T ss_dssp             CCHHHHTTCT--THHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHhhH--HHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHH
Confidence            9877665322  22233222211000         0000 000                  0       00147899999


Q ss_pred             HhcCCCCCCCCCHHHHHcCcccccC
Q 007177          290 RLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       290 ~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      +||++||++|||++|+|+||||++.
T Consensus       355 ~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          355 RMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             HhcCCChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999999864


No 103
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.2e-46  Score=392.22  Aligned_cols=262  Identities=25%  Similarity=0.424  Sum_probs=206.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC------
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR------   91 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~------   91 (614)
                      ++|++++.||+|+||.||+|.++.+|+.||||++.... .......+.+|+.+|+.|+||||+++++++.....      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            47999999999999999999999999999999997532 33456778999999999999999999998754321      


Q ss_pred             ----------------------------------------------CCCCcEEEEEecCC-CcHHHHHHhCCC---CCHH
Q 007177           92 ----------------------------------------------RDFKDIYVVFELME-SDLHQVIKANDD---LTRE  121 (614)
Q Consensus        92 ----------------------------------------------~~~~~~ylV~E~~~-g~L~~~i~~~~~---lse~  121 (614)
                                                                    .....+|+|||||+ ++|.+++.....   .++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                          12234899999998 499999987643   5666


Q ss_pred             HHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCCCc---------cccccccCCccccC
Q 007177          122 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT---------IFWTDYVATRWYRA  192 (614)
Q Consensus       122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~---------~~~~~~vgt~~Y~A  192 (614)
                      .++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.........         ......+||+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            789999999999999999999999999999999999999999999998765432111         12244679999999


Q ss_pred             cccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCc
Q 007177          193 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQ  272 (614)
Q Consensus       193 PEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~  272 (614)
                      ||++.+  ..++.++|||||||++|+|++|..|+..     ....+.....                           ..
T Consensus       245 PE~~~~--~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~---------------------------~~  290 (332)
T 3qd2_B          245 PEQIHG--NNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRN---------------------------LK  290 (332)
T ss_dssp             HHHHHC--CCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHT---------------------------TC
T ss_pred             hHHhcC--CCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhc---------------------------cC
Confidence            999987  6899999999999999999998766521     1111111000                           01


Q ss_pred             ccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          273 FSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       273 ~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                      +...+...++.+.+||.+||+.||++|||++|+|+||||+++
T Consensus       291 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          291 FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence            111122346788999999999999999999999999999864


No 104
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.5e-46  Score=380.96  Aligned_cols=257  Identities=26%  Similarity=0.440  Sum_probs=215.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++     .+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecCC
Confidence            4689999999999999999999999999999999864211 111245678999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..|+||||++ ++|.+.+.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            7999999999 599999988888999999999999999999999999999999999999999999999999998654322


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      .     .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+....            
T Consensus       163 ~-----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------  223 (279)
T 3fdn_A          163 R-----RTDLCGTLDYLPPEMIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE------------  223 (279)
T ss_dssp             ----------CCCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC------------
T ss_pred             c-----ccccCCCCCccCHhHhcc--CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC------------
Confidence            2     234579999999999887  678999999999999999999999998887655554442210            


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                      .   .....+++.+.+||.+||..||.+|||++|+|+||||+....
T Consensus       224 ----------------~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          224 ----------------F---TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             ----------------C---CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             ----------------C---CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence                            0   112346789999999999999999999999999999987543


No 105
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=6.4e-46  Score=384.04  Aligned_cols=258  Identities=29%  Similarity=0.464  Sum_probs=217.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++||||+++++++     .+...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~   80 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTH   80 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCE
Confidence            468999999999999999999999999999999997532  22345678999999999999999999998     45567


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~~~  172 (614)
                      +|+|||||+ ++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||++....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            999999998 5999999888889999999999999999999999999999999999999   778899999999997543


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..     .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+....+..+....          
T Consensus       161 ~~-----~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~----------  223 (304)
T 2jam_A          161 NG-----IMSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY----------  223 (304)
T ss_dssp             CB-----TTHHHHSCCCBCCTTTBSS--CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC----------
T ss_pred             CC-----ccccccCCCCccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC----------
Confidence            22     1234579999999999987  679999999999999999999999998877655554443211          


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                       .......+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       224 -----------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          224 -----------------YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             -----------------CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             -----------------CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence                             1111233457889999999999999999999999999999998653


No 106
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.8e-46  Score=389.65  Aligned_cols=280  Identities=25%  Similarity=0.392  Sum_probs=209.6

Q ss_pred             CCCeEEE-eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCC
Q 007177           17 ASRYKIQ-EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~-~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .++|++. +.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+.+ +||||+++++++     .+.
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~   83 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEE   83 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeC
Confidence            5689995 78999999999999999999999999997542  23356788999999885 799999999998     345


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc---EEEeecCcccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARV  170 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~---vKL~DFGla~~  170 (614)
                      +.+|+|||||+ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.   +||+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            67999999998 699999988888999999999999999999999999999999999999998776   99999999976


Q ss_pred             ccCCCC----CccccccccCCccccCccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          171 AFNDTP----TTIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       171 ~~~~~~----~~~~~~~~vgt~~Y~APEvl~~~---~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ......    ........+||+.|+|||++.+.   ...++.++|||||||++|+|++|+.||.+.+..+..        
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--------  235 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG--------  235 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC--------
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc--------
Confidence            432211    11112345799999999998631   134788999999999999999999999876532100        


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      -...+.    ........+..+...........+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       236 ~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          236 WDRGEA----CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             C----C----CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             cccccc----chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            000000    00000111111212111111223456889999999999999999999999999999998754


No 107
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=8.6e-46  Score=387.59  Aligned_cols=255  Identities=28%  Similarity=0.494  Sum_probs=214.4

Q ss_pred             CeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcEE
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIY   98 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~y   98 (614)
                      .|...+.||+|+||.||+|.++.+|+.||||++....  ......+.+|+.+|+.++||||+++++++.     .....|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~  118 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYL-----VGEELW  118 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEE
Confidence            4888999999999999999999999999999987432  233556889999999999999999999984     446799


Q ss_pred             EEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCCC
Q 007177           99 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT  177 (614)
Q Consensus        99 lV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~~  177 (614)
                      +||||++ ++|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus       119 lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  197 (321)
T 2c30_A          119 VLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  197 (321)
T ss_dssp             EEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             EEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc
Confidence            9999998 588888754 56999999999999999999999999999999999999999999999999999865433221


Q ss_pred             ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchh
Q 007177          178 TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK  257 (614)
Q Consensus       178 ~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~  257 (614)
                         ....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..+.+..+....               
T Consensus       198 ---~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~---------------  257 (321)
T 2c30_A          198 ---RKSLVGTPYWMAPEVISR--SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---------------  257 (321)
T ss_dssp             ---BCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS---------------
T ss_pred             ---cccccCCccccCHhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------
Confidence               245689999999999977  678999999999999999999999998877655544332210               


Q ss_pred             HHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          258 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       258 ~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                   .+.......+++.+.+||.+||+.||++|||++|+|+||||...
T Consensus       258 -------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          258 -------------PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             -------------CCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             -------------CCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence                         00011123568899999999999999999999999999999854


No 108
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3.7e-46  Score=399.17  Aligned_cols=257  Identities=28%  Similarity=0.416  Sum_probs=213.2

Q ss_pred             CCeEE--EeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           18 SRYKI--QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        18 ~rY~i--~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      +.|.+  .+.||+|+||.||+|.+..+|+.||+|+++..  .......+.+|+.+|+.|+||||+++++++     .+..
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~  159 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKN  159 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECC
Confidence            34555  67899999999999999999999999999753  335567889999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE--CCCCcEEEeecCccccc
Q 007177           96 DIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA--NANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi--~~~~~vKL~DFGla~~~  171 (614)
                      .+|||||||+ ++|.+.+... ..+++..++.|+.||+.||.|||+.||+||||||+|||+  +.++.+||+|||+++..
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~  239 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY  239 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence            7999999998 5998888654 469999999999999999999999999999999999999  56788999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....    ....+||+.|+|||++.+  ..++.++||||||||+|+|++|..||.+.+..+.+..+......       
T Consensus       240 ~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-------  306 (373)
T 2x4f_A          240 KPREK----LKVNFGTPEFLAPEVVNY--DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD-------  306 (373)
T ss_dssp             CTTCB----CCCCCSSCTTCCHHHHTT--CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-------
T ss_pred             CCccc----cccccCCCcEeChhhccC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-------
Confidence            43321    234579999999999876  67899999999999999999999999998877776665432111       


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                          .....++.+++++.+||.+||+.||.+|||++|+|+||||++.
T Consensus       307 --------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          307 --------------------LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             --------------------SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             --------------------CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence                                1123346789999999999999999999999999999999854


No 109
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.1e-46  Score=404.77  Aligned_cols=259  Identities=28%  Similarity=0.443  Sum_probs=205.3

Q ss_pred             CCCCeEEE-eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHH-HhcCCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQ-EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLL-RLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~-~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL-~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|.+. +.||+|+||.||+|.++.+|+.||||++...       ..+.+|+.++ +.++||||+++++++.... .+
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~  130 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLY-AG  130 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TT
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecc-cC
Confidence            44678877 7999999999999999999999999999642       3466888887 4558999999999874311 23


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC---CCcEEEeecCc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGL  167 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~---~~~vKL~DFGl  167 (614)
                      ...+|||||||+ |+|.+++....  .+++..++.|+.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            567999999998 59999998754  5999999999999999999999999999999999999998   78899999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhH----HHHHHHhhhC
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH----QLDLMTDLLG  243 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~----~l~~i~~~~g  243 (614)
                      ++......    .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|..||.+.+...    ....+     
T Consensus       211 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i-----  279 (400)
T 1nxk_A          211 AKETTSHN----SLTTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-----  279 (400)
T ss_dssp             CEECC---------------CTTCCGGGSCC--CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH-----
T ss_pred             ccccCCCC----ccccCCCCCCccCHhhcCC--CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH-----
Confidence            98653222    2345689999999999976  689999999999999999999999998765321    11111     


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                            ...........|..+++++.+||.+||..||.+|||++|+|+||||.+..
T Consensus       280 ----------------------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          280 ----------------------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             ----------------------HHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             ----------------------HcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence                                  01111111234567899999999999999999999999999999998643


No 110
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.1e-45  Score=386.33  Aligned_cols=284  Identities=31%  Similarity=0.520  Sum_probs=229.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCC-cEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC------cceeeeEecC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTG-EKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD------IVEIKHIMLP   88 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg-~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn------Iv~l~~v~~~   88 (614)
                      ..++|++++.||+|+||.||+|.+..++ ..||||+++.   .......+.+|+.+|+.++|++      |+.+++++  
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~--   91 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF--   91 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE--
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee--
Confidence            4589999999999999999999998877 6899999974   2345567788999999997766      88888887  


Q ss_pred             CCCCCCCcEEEEEecCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE------------
Q 007177           89 PSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA------------  154 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi------------  154 (614)
                         ...+.+|||||||+++|.+.+....  .+++..++.|+.||+.||.|||++||+||||||+|||+            
T Consensus        92 ---~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  168 (355)
T 2eu9_A           92 ---NFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH  168 (355)
T ss_dssp             ---EETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred             ---eeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccc
Confidence               4456799999999999988887654  69999999999999999999999999999999999999            


Q ss_pred             -------CCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCC
Q 007177          155 -------NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP  227 (614)
Q Consensus       155 -------~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~  227 (614)
                             +.++.+||+|||+++......      ...+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.
T Consensus       169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~  240 (355)
T 2eu9_A          169 KSCEEKSVKNTSIRVADFGSATFDHEHH------TTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYRGFTLFQ  240 (355)
T ss_dssp             -CCCEEEESCCCEEECCCTTCEETTSCC------CSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccccCCCcEEEeecCccccccccc------cCCcCCCcccCCeeeec--CCCCCccchHHHHHHHHHHHhCCCCCC
Confidence                   567899999999998643222      34579999999999987  689999999999999999999999999


Q ss_pred             CCChhHHHHHHHhhhCCCchhhhhhhhchh--------------HHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcC
Q 007177          228 GKNVVHQLDLMTDLLGTPSLDTISRVRNDK--------------ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLA  293 (614)
Q Consensus       228 g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~  293 (614)
                      +.+..+.+..+....+.++...+.......              ..+++..... ............++.+.+||.+||.
T Consensus       241 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~  319 (355)
T 2eu9_A          241 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHVQLFDLMRRMLE  319 (355)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCC-cccccccccchhHHHHHHHHHHHhc
Confidence            999999999999999888776654432211              1111111100 0000011112235678999999999


Q ss_pred             CCCCCCCCHHHHHcCcccccCCc
Q 007177          294 FDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       294 ~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      .||.+|||++|+|+||||+++..
T Consensus       320 ~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          320 FDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             SSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             CChhhCcCHHHHhcChhhcCCCh
Confidence            99999999999999999997653


No 111
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=2.4e-46  Score=392.38  Aligned_cols=269  Identities=25%  Similarity=0.404  Sum_probs=222.3

Q ss_pred             cccccCCCCCCeEEE-eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEe
Q 007177            9 EFFSEYGDASRYKIQ-EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIM   86 (614)
Q Consensus         9 ~~~~~~~~~~rY~i~-~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~   86 (614)
                      .|-......++|.+. +.||+|+||.||+|.++.+++.||||++............+.+|+.+|+.+. ||||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            333333445679888 8999999999999999999999999999865544455677889999999995 69999999998


Q ss_pred             cCCCCCCCCcEEEEEecCCC-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC---CCcE
Q 007177           87 LPPSRRDFKDIYVVFELMES-DLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA---NCKL  160 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~---~~~v  160 (614)
                           .+...+|+|||||.+ +|.+++...  ..+++..++.|+.||+.||.|||+.||+||||||+|||++.   ++.+
T Consensus        99 -----~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~  173 (327)
T 3lm5_A           99 -----ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDI  173 (327)
T ss_dssp             -----ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCE
T ss_pred             -----EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcE
Confidence                 455679999999985 999888543  67999999999999999999999999999999999999988   7899


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD  240 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~  240 (614)
                      ||+|||+++.......    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus       174 kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  247 (327)
T 3lm5_A          174 KIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNY--DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ  247 (327)
T ss_dssp             EECCGGGCEEC-------------CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEeeCccccccCCccc----cccccCCcCccCCeeecC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh
Confidence            9999999987543321    234679999999999986  6899999999999999999999999999887666554433


Q ss_pred             hhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          241 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       241 ~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      ...                           ......+..+++.+.+||.+||+.||.+|||++++|+||||+++.
T Consensus       248 ~~~---------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          248 VNV---------------------------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             TCC---------------------------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             ccc---------------------------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            211                           112234567889999999999999999999999999999998764


No 112
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.1e-46  Score=391.54  Aligned_cols=271  Identities=24%  Similarity=0.346  Sum_probs=217.1

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ....++|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++.... .
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   86 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-P   86 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-T
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-C
Confidence            3456789999999999999999999999999999999976433 3445667889999999999999999999885432 1


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      .....|+|||||+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            2234699999998 599999998888999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .............+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..+....+...          
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~----------  234 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----------  234 (311)
T ss_dssp             ---------------CCTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC----------
T ss_pred             cccccccccccccCcCcccCCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC----------
Confidence            443332222344679999999999987  68999999999999999999999999988765554333221          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                       ...........+++.+.+||.+||+.||.+||++.++|.|+|++..
T Consensus       235 -----------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          235 -----------------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             -----------------CCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             -----------------CCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence                             1111222345688999999999999999999999999999999754


No 113
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=6.3e-46  Score=393.60  Aligned_cols=258  Identities=26%  Similarity=0.388  Sum_probs=216.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC-hHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH-ISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+|+.++||||+++++++.     +
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~  125 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----R  125 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----E
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----E
Confidence            3346799999999999999999999999999999999754322 334567889999999999999999999984     4


Q ss_pred             CCcEEEEEecCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~-~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ....|+|||||.|+|.+++. ....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            46799999999999988885 45679999999999999999999999999999999999999999999999999997643


Q ss_pred             CCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ..       ...+||+.|+|||++.+. ...++.++|||||||++|||++|.+||.+.+....+..+...          
T Consensus       206 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----------  268 (348)
T 1u5q_A          206 PA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----------  268 (348)
T ss_dssp             SB-------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----------
T ss_pred             CC-------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------
Confidence            21       345799999999988421 257899999999999999999999999887765554433210          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                      ..+.   .....+++.+.+||.+||+.||.+|||++++|+||||..
T Consensus       269 ----------------~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          269 ----------------ESPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             ----------------CCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             ----------------CCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence                            0110   112356889999999999999999999999999999975


No 114
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=7.5e-46  Score=391.15  Aligned_cols=262  Identities=26%  Similarity=0.348  Sum_probs=209.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCC--CCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRH--PDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~H--pnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.+ .+++.||||++............+.+|+.+|+.++|  |||+++++++     .+
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~   80 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----IT   80 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----ee
Confidence            456899999999999999999987 468899999997655566667888999999999986  9999999998     45


Q ss_pred             CCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           94 FKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ...+|||||++.++|.+++.....+++.+++.|+.||+.||.|||+.||+||||||+|||++ ++.+||+|||+++....
T Consensus        81 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           81 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             SSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             CCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            56799999988889999999999999999999999999999999999999999999999997 67899999999986543


Q ss_pred             CCCCccccccccCCccccCccccccc---------CCCCCCcccchhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhhhC
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLMTDLLG  243 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~---------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~-~~l~~i~~~~g  243 (614)
                      ... .......+||+.|+|||++.+.         ...|+.++|||||||++|+|++|+.||.+.... ..+..+     
T Consensus       160 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-----  233 (343)
T 3dbq_A          160 DTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-----  233 (343)
T ss_dssp             -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH-----
T ss_pred             ccc-cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHH-----
Confidence            322 1123456899999999998531         146889999999999999999999999764321 111111     


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           +......   ......+..+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       234 ---------------------~~~~~~~---~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          234 ---------------------IDPNHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             ---------------------HCTTSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             ---------------------hcCCccc---CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence                                 0011111   1123456789999999999999999999999999999853


No 115
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=8.8e-46  Score=378.05  Aligned_cols=260  Identities=28%  Similarity=0.471  Sum_probs=217.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ++|++++.||+|+||.||+|.+..+|+.||+|+++......    .....+.+|+.+|+.++||||+++++++     .+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----EN   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----cC
Confidence            47999999999999999999999999999999987532221    1356788999999999999999999998     44


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC----cEEEeecCcc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC----KLKICDFGLA  168 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~----~vKL~DFGla  168 (614)
                      ....|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++    .+||+|||++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            567999999997 69999998888899999999999999999999999999999999999998877    8999999999


Q ss_pred             ccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ........    .....+|+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+.......   
T Consensus       160 ~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---  230 (283)
T 3bhy_A          160 HKIEAGNE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF---  230 (283)
T ss_dssp             EECC------------CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC---
T ss_pred             eeccCCCc----ccccCCCcCccCcceecC--CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC---
Confidence            86543221    234579999999999876  678999999999999999999999999887666555443211111   


Q ss_pred             hhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          249 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                              ....++.+++.+.+||.+||..||.+|||++++|+||||+.+.
T Consensus       231 ------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          231 ------------------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             ------------------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             ------------------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence                                    1122356788999999999999999999999999999998764


No 116
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=4.3e-47  Score=406.00  Aligned_cols=254  Identities=17%  Similarity=0.210  Sum_probs=202.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCc-cCChHHHHHHHHHHHH---HHhcCCCCcceee-------eE
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAARILREIKL---LRLLRHPDIVEIK-------HI   85 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~~Ei~i---L~~L~HpnIv~l~-------~v   85 (614)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++... .........+.+|+.+   |+.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            47899999999999999999999999999999999743 2334466778899954   5555799999998       54


Q ss_pred             ecCCCC-------CCCC-----cEEEEEecCCCcHHHHHHhCCCCCH-------HHHHHHHHHHHHHHHHHHhCCeEeec
Q 007177           86 MLPPSR-------RDFK-----DIYVVFELMESDLHQVIKANDDLTR-------EHYQFFLYQLLRALKYIHTANVYHRD  146 (614)
Q Consensus        86 ~~~~~~-------~~~~-----~~ylV~E~~~g~L~~~i~~~~~lse-------~~~~~i~~QIl~aL~yLHs~gIvHrD  146 (614)
                      +.....       .+..     ..|||||||+|+|.+++...+.+++       ..+..|+.||+.||.|||+.||+|||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  231 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  231 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            432210       0111     3899999999999999987655655       78888999999999999999999999


Q ss_pred             CCCCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCC-----------CCCCcccchhHHHH
Q 007177          147 LKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFS-----------KYTPAIDIWSIGCI  215 (614)
Q Consensus       147 LKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~-----------~y~~~~DIWSLG~I  215 (614)
                      |||+|||++.++.+||+|||+++....      .....+| +.|+|||++.+  .           .|+.++|||||||+
T Consensus       232 ikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~--~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          232 LRPVDIVLDQRGGVFLTGFEHLVRDGA------RVVSSVS-RGFEPPELEAR--RATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTC------EEECCCC-TTCCCHHHHHH--HTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             CCHHHEEEcCCCCEEEEechhheecCC------cccCCCC-cCccChhhhcc--cccccccccccccCChhhhHHHHHHH
Confidence            999999999999999999999985322      2244577 99999999876  4           68999999999999


Q ss_pred             HHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCC
Q 007177          216 FAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFD  295 (614)
Q Consensus       216 l~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~D  295 (614)
                      +|||++|+.||.+.+....+.                                   .....++.+++.+.+||.+||..|
T Consensus       303 l~elltg~~Pf~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~li~~~L~~d  347 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSE-----------------------------------WIFRSCKNIPQPVRALLEGFLRYP  347 (377)
T ss_dssp             HHHHHHSSCCC------CCSG-----------------------------------GGGSSCCCCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCcccccccchh-----------------------------------hhhhhccCCCHHHHHHHHHHcCCC
Confidence            999999999997654321110                                   011223578899999999999999


Q ss_pred             CCCCCCHHHHHcCcccccC
Q 007177          296 PKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       296 P~~Rpsa~eiL~hp~f~~~  314 (614)
                      |.+|||+.|+|+||||+.+
T Consensus       348 p~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          348 KEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             GGGCCCHHHHHTSHHHHHH
T ss_pred             chhCCCHHHHhhChHHHHH
Confidence            9999999999999999864


No 117
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=3.4e-45  Score=376.46  Aligned_cols=263  Identities=29%  Similarity=0.428  Sum_probs=223.5

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .....++|.+.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++     
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----   84 (294)
T 2rku_A           10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----   84 (294)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred             CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----
Confidence            3456789999999999999999999999999999999987543 3345567788999999999999999999998     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+.+.+|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  164 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK  164 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCcee
Confidence            45567999999999 69999998888899999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      .......   .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+..          
T Consensus       165 ~~~~~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----------  229 (294)
T 2rku_A          165 VEYDGER---KKVLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK----------  229 (294)
T ss_dssp             CCSTTCC---BCCCCSCCSSCCHHHHTT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT----------
T ss_pred             cccCccc---cccccCCCCcCCcchhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh----------
Confidence            5432221   234679999999999877  5789999999999999999999999988775544333211          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                       . ..   .....+++.+.+||.+||+.||.+|||++|+|+||||.....
T Consensus       230 -----------------~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          230 -----------------N-EY---SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             -----------------T-CC---CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -----------------c-cC---CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence                             0 00   112357889999999999999999999999999999986543


No 118
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=7.5e-46  Score=425.76  Aligned_cols=258  Identities=22%  Similarity=0.384  Sum_probs=221.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.++.+++.||||++++.. ........+.+|..+|..+ +||+|+.+++++     .+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-----~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-----BC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-----Ee
Confidence            3578999999999999999999999999999999997431 1122345678899999887 699999999998     55


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|||||||+ |+|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+||||+.++++||+|||+++...
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            678999999998 5999999988899999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....   .....+||+.|+|||++.+  ..|+.++||||||||+|||++|.+||.+.+..+.+..|...           
T Consensus       494 ~~~~---~~~~~~GT~~Y~APE~l~~--~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-----------  557 (674)
T 3pfq_A          494 WDGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----------  557 (674)
T ss_dssp             CTTC---CBCCCCSCSSSCCHHHHTC--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS-----------
T ss_pred             cCCc---ccccccCCCcccCHhhhcC--CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-----------
Confidence            3222   1345789999999999987  68999999999999999999999999998877766665321           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCH-----HHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTA-----EEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa-----~eiL~hp~f~~~  314 (614)
                                       ..   .....+++++.+||++||+.||.+||++     +||++||||+++
T Consensus       558 -----------------~~---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          558 -----------------NV---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             -----------------CC---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             -----------------CC---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence                             01   1123578999999999999999999997     999999999976


No 119
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.8e-46  Score=404.98  Aligned_cols=261  Identities=32%  Similarity=0.524  Sum_probs=205.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC------ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE------HISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~------~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      .++|.+.+.||+|+||.||+|.++.+++.||||++.....      .......+.+|+.+|+.++||||+++++++.   
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~---  210 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD---  210 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE---
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe---
Confidence            4689999999999999999999999999999999874321      1122235789999999999999999999873   


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC---cEEEeecC
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC---KLKICDFG  166 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~---~vKL~DFG  166 (614)
                         ...+|+|||||. ++|.+.+.....+++..++.|+.||+.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus       211 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          211 ---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             ---SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             ---cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence               235799999998 59999998888999999999999999999999999999999999999997554   59999999


Q ss_pred             ccccccCCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCC
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      +++......    .....+||+.|+|||++.+. ...|+.++|||||||++|+|++|.+||.+......+....      
T Consensus       288 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i------  357 (419)
T 3i6u_A          288 HSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------  357 (419)
T ss_dssp             TTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH------
T ss_pred             cceecCCCc----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH------
Confidence            998754322    22456899999999998531 2568889999999999999999999998754322221111      


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                          ...........+..+++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       358 --------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          358 --------------------TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             --------------------HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             --------------------hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence                                011111122334678899999999999999999999999999999975


No 120
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.9e-45  Score=385.39  Aligned_cols=263  Identities=29%  Similarity=0.423  Sum_probs=223.7

Q ss_pred             cCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           13 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        13 ~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .....++|.+.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++     
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----  110 (335)
T 2owb_A           36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----  110 (335)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred             CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----
Confidence            3455679999999999999999999999999999999987543 3445667788999999999999999999998     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+.+.+|+|||||+ ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          111 EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK  190 (335)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCcee
Confidence            45567999999999 59999998888899999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      .......   .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+..+...         
T Consensus       191 ~~~~~~~---~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---------  256 (335)
T 2owb_A          191 VEYDGER---KKVLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN---------  256 (335)
T ss_dssp             CCSTTCC---BCCCCSCCSSCCHHHHHT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---------
T ss_pred             cccCccc---ccccCCCccccCHHHhcc--CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC---------
Confidence            5432221   234679999999999877  67899999999999999999999999887755444333110         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                         ..   .....+++.+.+||.+||+.||.+|||++|+|+||||.....
T Consensus       257 -------------------~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          257 -------------------EY---SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             -------------------CC---CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -------------------CC---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence                               00   112357889999999999999999999999999999986543


No 121
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.5e-45  Score=375.37  Aligned_cols=251  Identities=21%  Similarity=0.288  Sum_probs=208.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCCCc
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      ++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.++..+ +||||+++++++     .+...
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~~~   85 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AEDDH   85 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EETTE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCCe
Confidence            579999999999999999999999999999999987655566777889999999999 899999999998     34567


Q ss_pred             EEEEEecCCC-cHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC--------------
Q 007177           97 IYVVFELMES-DLHQVIKAN----DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN--------------  157 (614)
Q Consensus        97 ~ylV~E~~~g-~L~~~i~~~----~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~--------------  157 (614)
                      +|+|||||++ +|.+++...    ..+++..++.|+.||+.||.|||++||+||||||+|||++.+              
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999985 999999764    679999999999999999999999999999999999999844              


Q ss_pred             -----CcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChh
Q 007177          158 -----CKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV  232 (614)
Q Consensus       158 -----~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~  232 (614)
                           ..+||+|||++.......       ...||+.|+|||++.+. ..++.++|||||||++|+|++|.++|......
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~-------~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~  237 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ-------VEEGDSRFLANEVLQEN-YTHLPKADIFALALTVVCAAGAEPLPRNGDQW  237 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC-------CCCCCGGGCCHHHHTTC-CTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH
T ss_pred             ccCCceEEEEcccccccccCCcc-------ccCCCccccChhHhcCC-CCCCchhhHHHHHHHHHHHhcCCCCCcchhHH
Confidence                 479999999998654322       23599999999998762 35678999999999999999999887554321


Q ss_pred             HHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          233 HQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       233 ~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                      .   .+.                           ..   ........+++.+.+||.+||..||.+|||++|+|+||||.
T Consensus       238 ~---~~~---------------------------~~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          238 H---EIR---------------------------QG---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             H---HHH---------------------------TT---CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             H---HHH---------------------------cC---CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence            1   110                           00   01122346789999999999999999999999999999998


Q ss_pred             cC
Q 007177          313 GL  314 (614)
Q Consensus       313 ~~  314 (614)
                      ..
T Consensus       285 ~~  286 (289)
T 1x8b_A          285 SA  286 (289)
T ss_dssp             --
T ss_pred             hh
Confidence            53


No 122
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.1e-45  Score=378.24  Aligned_cols=261  Identities=23%  Similarity=0.380  Sum_probs=199.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++............+.++..+++.++||||+++++++.     +.+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~   79 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG   79 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccC
Confidence            357899999999999999999999999999999999764333333344445555678889999999999984     456


Q ss_pred             cEEEEEecCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           96 DIYVVFELMESDLHQVIKA----NDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~----~~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      ..|+|||||+++|.+++..    ...+++..++.|+.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus        80 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY  159 (290)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred             CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence            7999999999988777653    56899999999999999999999998 999999999999999999999999999976


Q ss_pred             ccCCCCCccccccccCCccccCcccccc--cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhhhCCCch
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGS--FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-VHQLDLMTDLLGTPSL  247 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~--~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~-~~~l~~i~~~~g~p~~  247 (614)
                      ......    .....||+.|+|||++..  ....++.++|||||||++|+|++|..||..... ...+..+..       
T Consensus       160 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------  228 (290)
T 3fme_A          160 LVDDVA----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-------  228 (290)
T ss_dssp             --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-------
T ss_pred             cccccc----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-------
Confidence            543322    123479999999999631  115689999999999999999999999976432 222221111       


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                         ...+   ......+++.+.+||.+||+.||++|||++|+|+||||+..
T Consensus       229 -------------------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          229 -------------------EPSP---QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             -------------------SCCC---CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -------------------cCCC---CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence                               1001   11123578899999999999999999999999999999853


No 123
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=1.4e-45  Score=377.45  Aligned_cols=259  Identities=25%  Similarity=0.415  Sum_probs=218.9

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      -..++|++.+.||+|+||.||+|.+..++..||||++..... .......+.+|+.+++.++||||+++++++     .+
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~   85 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HD   85 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----EC
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----Ec
Confidence            345689999999999999999999999999999999864211 111235688999999999999999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            567999999998 5999999888889999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ...     .....|++.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+...           
T Consensus       166 ~~~-----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----------  227 (284)
T 2vgo_A          166 SLR-----RRTMCGTLDYLPPEMIEG--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------  227 (284)
T ss_dssp             SSC-----BCCCCSCGGGCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-----------
T ss_pred             ccc-----cccccCCCCcCCHHHhcc--CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc-----------
Confidence            221     134579999999999987  67899999999999999999999999887765544333210           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                       ..   ...+.+++.+.+||.+||..||.+|||++++|+||||+....
T Consensus       228 -----------------~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          228 -----------------DL---KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             -----------------CC---CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             -----------------cc---CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence                             00   112457889999999999999999999999999999986543


No 124
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.4e-45  Score=379.09  Aligned_cols=266  Identities=29%  Similarity=0.346  Sum_probs=215.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++++.||+|+||.||+|.+..++..||+|++.... .......++.+|+.+++.++||||+++++++     .+
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~   82 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EE   82 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----EC
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----ee
Confidence            34578999999999999999999999999999999986432 3445567889999999999999999999998     45


Q ss_pred             CCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      .+.+|+|||||++ +|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            6779999999985 999999988899999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      .....  .....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..........            
T Consensus       163 ~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------------  226 (294)
T 4eqm_A          163 ETSLT--QTNHVLGTVQYFSPEQAKG--EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ------------  226 (294)
T ss_dssp             --------------CCSSCCHHHHHT--CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHS------------
T ss_pred             ccccc--ccCccccCccccCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhh------------
Confidence            32211  1234579999999999887  6789999999999999999999999988875444322211            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                    ...+.......+.+++.+.+||.+||+.||.+||+..+.|.+.|..-+.
T Consensus       227 --------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          227 --------------DSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             --------------SCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             --------------ccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence                          1111111233467889999999999999999999666667777755443


No 125
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=5.2e-45  Score=388.76  Aligned_cols=259  Identities=28%  Similarity=0.492  Sum_probs=217.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC--h----HHHHHHHHHHHHHHhc-CCCCcceeeeEecCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH--I----SDAARILREIKLLRLL-RHPDIVEIKHIMLPPS   90 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~--~----~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~   90 (614)
                      ++|++.+.||+|+||.||+|.++.+|+.||||++......  .    .....+.+|+.+|+.+ +||||+++++++    
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~----  169 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY----  169 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE----
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE----
Confidence            5799999999999999999999999999999998653221  1    1245678999999999 799999999998    


Q ss_pred             CCCCCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           91 RRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                       ......|+|||||++ +|.+++.....+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++.
T Consensus       170 -~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          170 -ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             -EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             -eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence             445679999999985 999999888889999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCccccccc----CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCC
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~----~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      .......    ....+||+.|+|||++.+.    ...|+.++|||||||++|+|++|..||.+.+....+..+...... 
T Consensus       249 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-  323 (365)
T 2y7j_A          249 HLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ-  323 (365)
T ss_dssp             ECCTTCC----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-
T ss_pred             ccCCCcc----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-
Confidence            6543321    2456899999999988531    135889999999999999999999999887765555444321111 


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                                                .....|...++.+.+||.+||..||++|||++++|+||||+
T Consensus       324 --------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          324 --------------------------FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             --------------------------CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             --------------------------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence                                      11122356788999999999999999999999999999997


No 126
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=4.1e-45  Score=375.94  Aligned_cols=265  Identities=28%  Similarity=0.445  Sum_probs=220.6

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC---C----hHHHHHHHHHHHHHHhcC-CCCcceeeeEe
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE---H----ISDAARILREIKLLRLLR-HPDIVEIKHIM   86 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~---~----~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~   86 (614)
                      +..++|++.+.||+|+||.||+|.++.+|+.||||++.....   .    ......+.+|+.+|+.+. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            456799999999999999999999999999999999964321   1    123456789999999996 99999999998


Q ss_pred             cCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeec
Q 007177           87 LPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                           .+...+|+||||++ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+||
T Consensus        94 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           94 -----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             -----ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             -----ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecc
Confidence                 45577999999998 599999998888999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCccccccccCCccccCcccccc----cCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhh
Q 007177          166 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGS----FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL  241 (614)
Q Consensus       166 Gla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~----~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~  241 (614)
                      |++........    .....+|+.|+|||++.+    ....++.++|||||||++|+|++|..||.+.+.......+...
T Consensus       169 g~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  244 (298)
T 1phk_A          169 GFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  244 (298)
T ss_dssp             TTCEECCTTCC----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             cchhhcCCCcc----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC
Confidence            99986543221    244679999999998752    1246889999999999999999999999887765554444221


Q ss_pred             hCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          242 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       242 ~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      .                           .......+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       245 ~---------------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          245 N---------------------------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             C---------------------------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             C---------------------------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            1                           1111123346788999999999999999999999999999998653


No 127
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2e-45  Score=395.57  Aligned_cols=260  Identities=26%  Similarity=0.354  Sum_probs=208.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC--CCCcceeeeEecCCCCCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR--HPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~--HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .+|++++.||+|+||.||+|.+.. ++.||||++............+.+|+.+|+.|+  ||||+++++++.     ...
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQ  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cCC
Confidence            469999999999999999998865 899999999765555667788999999999997  599999999884     445


Q ss_pred             cEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           96 DIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      .+|||||+++++|.+++.....+++.+++.|+.||+.||.|||+.||+||||||+|||++ ++.+||+|||+++......
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            699999977789999999988999999999999999999999999999999999999995 5799999999998654322


Q ss_pred             CCccccccccCCccccCccccccc---------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhhhCCC
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-VHQLDLMTDLLGTP  245 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~---------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~-~~~l~~i~~~~g~p  245 (614)
                      . .......+||+.|+|||++.+.         ...|+.++||||||||+|+|++|.+||.+... ...+..+.      
T Consensus       209 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~------  281 (390)
T 2zmd_A          209 T-SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------  281 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH------
T ss_pred             c-cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh------
Confidence            1 1123456899999999998641         13689999999999999999999999976532 12221111      


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                          .......   .....+..+.+||.+||..||.+|||++|+|+||||+..
T Consensus       282 --------------------~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          282 --------------------DPNHEIE---FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             --------------------CTTSCCC---CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             --------------------CccccCC---CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                                0111111   112346789999999999999999999999999999854


No 128
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.1e-46  Score=392.71  Aligned_cols=250  Identities=23%  Similarity=0.380  Sum_probs=211.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh------HHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI------SDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~------~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      .++|++++.||+|+||.||+|.++.+++.||||++.......      .....+.+|+.+|+.++||||+++++++    
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~----   98 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF----   98 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence            368999999999999999999999999999999997542211      1334567899999999999999999998    


Q ss_pred             CCCCCcEEEEEecCC-C-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           91 RRDFKDIYVVFELME-S-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                       .+.+.+|+||||+. | +|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++
T Consensus        99 -~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A           99 -ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             -ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             -eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence             45677999999986 5 99999999889999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCcccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y-~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      +.......    ....+||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||......               
T Consensus       178 ~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------  236 (335)
T 3dls_A          178 AYLERGKL----FYTFCGTIEYCAPEVLMG--NPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------  236 (335)
T ss_dssp             EECCTTCC----BCEECSCGGGCCHHHHTT--CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred             eECCCCCc----eeccCCCccccChhhhcC--CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence            87543322    234679999999999876  444 78999999999999999999999653210               


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                       ...     .......+++.+.+||.+||..||++|||++++|+||||++.
T Consensus       237 -----------------~~~-----~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          237 -----------------VEA-----AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             -----------------TTT-----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             -----------------Hhh-----ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence                             000     001123478899999999999999999999999999999853


No 129
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.2e-45  Score=380.53  Aligned_cols=269  Identities=22%  Similarity=0.370  Sum_probs=214.7

Q ss_pred             cccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecC
Q 007177            9 EFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLP   88 (614)
Q Consensus         9 ~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~   88 (614)
                      ..-......++|++++.||+|+||.||+|.+..+++.||+|++...  .......+.+|+.+|+.++||||+++++++. 
T Consensus        10 ~~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-   86 (302)
T 2j7t_A           10 HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYY-   86 (302)
T ss_dssp             CCBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             ccccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-
Confidence            3344456778999999999999999999999999999999998753  2234567889999999999999999999984 


Q ss_pred             CCCCCCCcEEEEEecCCC-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecC
Q 007177           89 PSRRDFKDIYVVFELMES-DLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG  166 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g-~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFG  166 (614)
                          +...+|+|||||++ +|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||
T Consensus        87 ----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  162 (302)
T 2j7t_A           87 ----HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG  162 (302)
T ss_dssp             ----CC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred             ----eCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECC
Confidence                44579999999985 88888765 5679999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccCCccccCcccccc---cCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~---~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ++.......   .......||+.|+|||++..   ....++.++|||||||++|+|++|..||.+.+....+..+...  
T Consensus       163 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--  237 (302)
T 2j7t_A          163 VSAKNLKTL---QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--  237 (302)
T ss_dssp             HHHHHHHHH---HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--
T ss_pred             CCccccccc---cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc--
Confidence            986432111   01133579999999998731   1157889999999999999999999999887765444333211  


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                              ..+  .......++..+.+||.+||..||.+|||++++|+||||+.+.
T Consensus       238 ------------------------~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          238 ------------------------DPP--TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             ------------------------CCC--CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             ------------------------CCc--ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence                                    000  0011234678999999999999999999999999999998654


No 130
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.2e-45  Score=375.24  Aligned_cols=261  Identities=26%  Similarity=0.397  Sum_probs=215.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcE
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      ++|++++.||+|+||.||+|.++.+++.||||++.... .......+.+|+.+++.++||||+++++++     .+....
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   80 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ   80 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcCCEE
Confidence            57999999999999999999999999999999987432 223456788999999999999999999998     445678


Q ss_pred             EEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCC
Q 007177           98 YVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP  176 (614)
Q Consensus        98 ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~  176 (614)
                      |+||||+++ +|.+++.....+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence            999999985 9999998777899999999999999999999999999999999999999999999999999976533221


Q ss_pred             CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHH-HHHHhhhCCCchhhhhhhhc
Q 007177          177 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL-DLMTDLLGTPSLDTISRVRN  255 (614)
Q Consensus       177 ~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l-~~i~~~~g~p~~~~i~~~~~  255 (614)
                       ........||+.|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..... ..+.                
T Consensus       161 -~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------------  222 (276)
T 2yex_A          161 -ERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----------------  222 (276)
T ss_dssp             -ECCBCCCCSCGGGCCGGGGTCS-SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH----------------
T ss_pred             -hhcccCCccccCccChHHHhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh----------------
Confidence             1123456799999999998762 23477899999999999999999999876543221 1110                


Q ss_pred             hhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          256 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       256 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                 ..  ......+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       223 -----------~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          223 -----------EK--KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             -----------TT--CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             -----------hc--ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence                       00  011122346788999999999999999999999999999998653


No 131
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.5e-45  Score=375.73  Aligned_cols=257  Identities=28%  Similarity=0.476  Sum_probs=192.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++     .+..
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSS
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCC
Confidence            4689999999999999999999999999999999864211 111246788999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||++ ++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            7999999998 5999999875 5799999999999999999999999999999999999999999999999999986542


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ....   .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||...+..+.+..+               
T Consensus       165 ~~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---------------  224 (278)
T 3cok_A          165 PHEK---HYTLCGTPNYISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV---------------  224 (278)
T ss_dssp             --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C---------------
T ss_pred             CCCc---ceeccCCCCcCCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH---------------
Confidence            2211   134578999999999876  57899999999999999999999999876543322111               


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                  .. ..   ......++..+.+||.+||..||.+|||++++|+||||...
T Consensus       225 ------------~~-~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          225 ------------VL-AD---YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             ------------CS-SC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             ------------hh-cc---cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence                        00 00   11223578899999999999999999999999999999864


No 132
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3.6e-45  Score=377.57  Aligned_cols=267  Identities=22%  Similarity=0.403  Sum_probs=217.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC--ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE--HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~--~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .++|++++.||+|+||.||+|.+..+++.||+|++.....  .......+.+|+.+|+.++||||+++++++..   .+.
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~   80 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK   80 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence            4789999999999999999999999999999999974311  12345678899999999999999999999843   234


Q ss_pred             CcEEEEEecCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELMESDLHQVIKA--NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~--~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..+|+|||||+++|.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        81 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           81 QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             -CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            57899999999888888876  4579999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..... .......||+.|+|||++.+....++.++|||||||++|+|++|..||.+.+.......+..            
T Consensus       161 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~------------  227 (305)
T 2wtk_C          161 PFAAD-DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK------------  227 (305)
T ss_dssp             TTCSS-CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH------------
T ss_pred             ccccc-cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc------------
Confidence            32221 12245679999999999876323357899999999999999999999988775544433321            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCccc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE  318 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~~~  318 (614)
                                     . ..   .....+++.+.+||.+||..||.+|||++|+|+||||+......
T Consensus       228 ---------------~-~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  274 (305)
T 2wtk_C          228 ---------------G-SY---AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA  274 (305)
T ss_dssp             ---------------C-CC---CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred             ---------------C-CC---CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCc
Confidence                           0 00   11235788999999999999999999999999999998765443


No 133
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3.6e-46  Score=397.75  Aligned_cols=269  Identities=17%  Similarity=0.150  Sum_probs=195.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhc--CCCCcceee-------eEec
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLL--RHPDIVEIK-------HIML   87 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L--~HpnIv~l~-------~v~~   87 (614)
                      .+|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.|  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            449999999999999999999999999999999986543 234456677886555555  699988755       3332


Q ss_pred             CCCCC------------CCCcEEEEEecCCCcHHHHHHhCC-CCCHHHH------HHHHHHHHHHHHHHHhCCeEeecCC
Q 007177           88 PPSRR------------DFKDIYVVFELMESDLHQVIKAND-DLTREHY------QFFLYQLLRALKYIHTANVYHRDLK  148 (614)
Q Consensus        88 ~~~~~------------~~~~~ylV~E~~~g~L~~~i~~~~-~lse~~~------~~i~~QIl~aL~yLHs~gIvHrDLK  148 (614)
                      .....            ....+|||||||+++|.+++...+ .+.+...      ..++.||+.||.|||++||+|||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDik  221 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFT  221 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCC
Confidence            22110            114589999999999999998642 3444444      5777999999999999999999999


Q ss_pred             CCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 007177          149 PKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG  228 (614)
Q Consensus       149 P~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g  228 (614)
                      |+|||++.++.+||+|||+++......      ....+|+.|+|||++.+....|+.++|||||||++|+|++|+.||.+
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVGTRG------PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETTCEE------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             HHHEEECCCCCEEEEecceeeecCCCc------cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999998653211      13467799999999875324689999999999999999999999987


Q ss_pred             CChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          229 KNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       229 ~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ......             ..+....         .............++.+++.+.+||.+||+.||++|||++++|+|
T Consensus       296 ~~~~~~-------------~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          296 VTPGIK-------------GSWKRPS---------LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             CCTTCT-------------TCCCBCC---------TTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             cCcccc-------------cchhhhh---------hhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            642100             0000000         000001111112245789999999999999999999999999999


Q ss_pred             cccccC
Q 007177          309 PYFKGL  314 (614)
Q Consensus       309 p~f~~~  314 (614)
                      |||+++
T Consensus       354 p~f~~~  359 (371)
T 3q60_A          354 PEFLQL  359 (371)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864


No 134
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=8.6e-46  Score=415.76  Aligned_cols=262  Identities=27%  Similarity=0.414  Sum_probs=216.5

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++++.||+|+||.||+|.++.+|+.||||++.+... .......+.+|+.+|+.++||||+++++++     .+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----ee
Confidence            345689999999999999999999999999999999964311 112345678999999999999999999998     45


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      ...+|+|||||. |+|.+++...+  .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~  335 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH  335 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence            568999999997 69999998754  499999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......    ....+||+.|+|||++.+  ..|+.++||||||||+|||++|.+||.+.+.......+.           
T Consensus       336 ~~~~~~----~~~~~GT~~Y~APEvl~~--~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~-----------  398 (576)
T 2acx_A          336 VPEGQT----IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE-----------  398 (576)
T ss_dssp             CCTTCC----EECCCSCGGGCCHHHHTT--CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH-----------
T ss_pred             cccCcc----ccccCCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH-----------
Confidence            543221    244689999999999987  679999999999999999999999998764321111110           


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                               ..+..    .+.   .....+++.+++||.+||+.||.+||     +++|+++||||+++
T Consensus       399 ---------~~i~~----~~~---~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          399 ---------RLVKE----VPE---EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             ---------HHHHH----CCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             ---------HHhhc----ccc---cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence                     00110    111   11246789999999999999999999     89999999999975


No 135
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.8e-45  Score=377.55  Aligned_cols=260  Identities=33%  Similarity=0.549  Sum_probs=219.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||+++++++     .+...
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~   95 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSSS   95 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCCCe
Confidence            3689999999999999999999999999999999976544445567889999999999999999999998     44567


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC---CcEEEeecCcccccc
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN---CKLKICDFGLARVAF  172 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~---~~vKL~DFGla~~~~  172 (614)
                      +|+||||+. ++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+|||++.+   +.+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            999999998 5999999887889999999999999999999999999999999999999764   469999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....    .....+|+.|+|||++.+   .++.++|||||||++|+|++|..||.+.+..+.+..+...           
T Consensus       176 ~~~~----~~~~~~~~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----------  237 (287)
T 2wei_A          176 QNTK----MKDRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG-----------  237 (287)
T ss_dssp             CCSS----CSCHHHHHTTCCHHHHTT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCCc----cccccCcccccChHHhcC---CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------
Confidence            3321    234468999999999875   5899999999999999999999999988765554443221           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                      ........+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       238 ----------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          238 ----------------KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             ----------------CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             ----------------CCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence                            00111123456789999999999999999999999999999998654


No 136
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.5e-45  Score=387.54  Aligned_cols=287  Identities=24%  Similarity=0.360  Sum_probs=224.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-----------CCCcceeee
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-----------HPDIVEIKH   84 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-----------HpnIv~l~~   84 (614)
                      ..++|++++.||+|+||.||+|.+..+++.||||++..   .......+.+|+.+|+.++           ||||+++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            35799999999999999999999999999999999974   2345567789999998886           899999999


Q ss_pred             EecCCCCCCCCcEEEEEecCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEEC------
Q 007177           85 IMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILAN------  155 (614)
Q Consensus        85 v~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~------  155 (614)
                      ++.... .+...+++|||+++++|.+++...  ..+++..++.|+.||+.||.|||+. ||+||||||+|||++      
T Consensus        94 ~~~~~~-~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           94 HFNHKG-PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEEEEE-TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred             HhhccC-CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence            985432 233478999999988999999863  4599999999999999999999998 999999999999994      


Q ss_pred             CCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----
Q 007177          156 ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN-----  230 (614)
Q Consensus       156 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~-----  230 (614)
                      .++.+||+|||+++.....      ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+     
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  244 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYT  244 (373)
T ss_dssp             TEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred             CcceEEEcccccccccCCC------CCCCCCCccccCcHHHhC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC
Confidence            4447999999999865432      234579999999999987  679999999999999999999999998765     


Q ss_pred             -hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCccc-------------CCCCCCCHHHHHHHHHhcCCCC
Q 007177          231 -VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS-------------QKFPNADPSALRLLERLLAFDP  296 (614)
Q Consensus       231 -~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~s~~l~dLI~~mL~~DP  296 (614)
                       ..+.+..+...+|.++...+.....  ...++............             ......++.+.+||.+||+.||
T Consensus       245 ~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  322 (373)
T 1q8y_A          245 KDDDHIAQIIELLGELPSYLLRNGKY--TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP  322 (373)
T ss_dssp             CHHHHHHHHHHHHCSCCHHHHHHCTT--HHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred             ChHHHHHHHHHhcCCCCHHHHhccch--hhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCc
Confidence             5677888888888887665543221  11111100000000000             0112345788999999999999


Q ss_pred             CCCCCHHHHHcCcccccCCc
Q 007177          297 KDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       297 ~~Rpsa~eiL~hp~f~~~~~  316 (614)
                      .+|||++|+|+||||++...
T Consensus       323 ~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          323 RKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             TTCBCHHHHHTCGGGTTCTT
T ss_pred             cccCCHHHHhhChhhhcccC
Confidence            99999999999999997644


No 137
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.9e-45  Score=389.84  Aligned_cols=284  Identities=22%  Similarity=0.339  Sum_probs=220.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+..++..||+|++... ........+.+|+.+|+.++||||+++++++.     +.+
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~  104 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDG  104 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-----ETT
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-----ECC
Confidence            457899999999999999999999999999999999754 24455678899999999999999999999984     456


Q ss_pred             cEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+|||||++ +|.+++...+.+++..+..|+.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus       105 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             EEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            79999999985 9999999888899999999999999999999996 999999999999999999999999999976432


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh---
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI---  250 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i---  250 (614)
                      ..     ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+............   
T Consensus       185 ~~-----~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3eqc_A          185 SM-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP  257 (360)
T ss_dssp             HC---------CCCCTTCCHHHHTT--CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------
T ss_pred             cc-----ccCCCCCCCeECHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCc
Confidence            21     234579999999999987  67999999999999999999999999887755433222111110000000   


Q ss_pred             ------------hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          251 ------------SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       251 ------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                  ...........+..+........  ....++.++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             ----------------CCCHHHHHHHHHHSCCCCC--CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccCCCcccccccCCCCcccchhhhhHHhccCCCCC--CcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                        00000011112222222111111  123478899999999999999999999999999999864


No 138
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=3.9e-45  Score=408.78  Aligned_cols=262  Identities=23%  Similarity=0.348  Sum_probs=215.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++.+... .......+.+|+.+|+.++||||+++++++     .+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~  257 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETK  257 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeC
Confidence            34789999999999999999999999999999999974321 112345688999999999999999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAN----DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~----~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      ..+|+|||||+ ++|.+++...    ..+++..++.|+.||+.||.|||+.||+||||||+|||++.+|.+||+|||+++
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceee
Confidence            77999999998 5999999763    369999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ........   ....+||+.|+|||++.+  ..|+.++||||||||+|||++|.+||.+.+.......+..         
T Consensus       338 ~~~~~~~~---~~~~~GT~~Y~APE~l~~--~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~---------  403 (543)
T 3c4z_A          338 ELKAGQTK---TKGYAGTPGFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---------  403 (543)
T ss_dssp             ECCTTCCC---BCCCCSCTTTSCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH---------
T ss_pred             eccCCCcc---cccccCCccccChhhhcC--CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH---------
Confidence            75433221   244689999999999987  6899999999999999999999999987642111111100         


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-----HHHHHcCcccccC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-----AEEALADPYFKGL  314 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-----a~eiL~hp~f~~~  314 (614)
                                ..+    .. ..   .....+++.+.+||.+||+.||.+||+     ++++++||||+++
T Consensus       404 ----------~i~----~~-~~---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          404 ----------RVL----EQ-AV---TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             ----------HHH----HC-CC---CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             ----------HHh----hc-cc---CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence                      000    00 11   112467899999999999999999995     5899999999975


No 139
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.9e-45  Score=382.47  Aligned_cols=260  Identities=33%  Similarity=0.541  Sum_probs=208.7

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC------ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE------HISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~------~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.....      .......+.+|+.+|+.++||||+++++++..  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--   86 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--   86 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence            3579999999999999999999999999999999975321      11223457899999999999999999999832  


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc---EEEeecC
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFG  166 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~---vKL~DFG  166 (614)
                          ...|+||||++ ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        87 ----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  162 (322)
T 2ycf_A           87 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  162 (322)
T ss_dssp             ----SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred             ----CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence                23899999998 499999988889999999999999999999999999999999999999987664   9999999


Q ss_pred             ccccccCCCCCccccccccCCccccCcccccc-cCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHH-HHHHhhhCC
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL-DLMTDLLGT  244 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~-~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l-~~i~~~~g~  244 (614)
                      +++.....    .......||+.|+|||++.+ ....++.++|||||||++|+|++|..||.+......+ ..+..    
T Consensus       163 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----  234 (322)
T 2ycf_A          163 HSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS----  234 (322)
T ss_dssp             TCEECCCC----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH----
T ss_pred             cceecccc----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh----
Confidence            99865322    11234579999999998742 1257899999999999999999999999775432211 11111    


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                             .........+..+++.+.+||.+||..||.+|||++++|+||||++
T Consensus       235 -----------------------~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          235 -----------------------GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             -----------------------TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             -----------------------CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence                                   0111112234567899999999999999999999999999999974


No 140
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.3e-45  Score=379.75  Aligned_cols=284  Identities=27%  Similarity=0.401  Sum_probs=195.1

Q ss_pred             CCCCCCCccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcc
Q 007177            1 MLQNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIV   80 (614)
Q Consensus         1 m~~~~~~~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv   80 (614)
                      |.+.++...+   ....++|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+|+.++||||+
T Consensus         1 m~~~s~~~p~---~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~   76 (303)
T 2vwi_A            1 MSEDSSALPW---SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIV   76 (303)
T ss_dssp             ---------------CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBC
T ss_pred             CCCccccccc---ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEe
Confidence            4444443332   344679999999999999999999999999999999986432 123456788999999999999999


Q ss_pred             eeeeEecCCCCCCCCcEEEEEecCC-CcHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCc
Q 007177           81 EIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKA--------NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKN  151 (614)
Q Consensus        81 ~l~~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~--------~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N  151 (614)
                      ++++++.     +...+|+||||++ ++|.+++..        ...+++..+..++.||+.||.|||+.||+||||||+|
T Consensus        77 ~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N  151 (303)
T 2vwi_A           77 SYYTSFV-----VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN  151 (303)
T ss_dssp             CEEEEEE-----SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             eEEEEEe-----ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Confidence            9999984     4456999999997 599999874        4569999999999999999999999999999999999


Q ss_pred             EEECCCCcEEEeecCccccccCCCC--CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 007177          152 ILANANCKLKICDFGLARVAFNDTP--TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK  229 (614)
Q Consensus       152 ILi~~~~~vKL~DFGla~~~~~~~~--~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~  229 (614)
                      ||++.++.+||+|||++........  .........||+.|+|||++.+. ..++.++|||||||++|+|++|..||.+.
T Consensus       152 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~  230 (303)
T 2vwi_A          152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKY  230 (303)
T ss_dssp             EEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHH-HCCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             EEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccc-cCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence            9999999999999999976543221  11112345799999999998642 36899999999999999999999999887


Q ss_pred             ChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCc
Q 007177          230 NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP  309 (614)
Q Consensus       230 ~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp  309 (614)
                      +....+......  .+..                   .............+++.+.+||.+||+.||.+|||++++|+||
T Consensus       231 ~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  289 (303)
T 2vwi_A          231 PPMKVLMLTLQN--DPPS-------------------LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK  289 (303)
T ss_dssp             CGGGHHHHHHTS--SCCC-------------------TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred             chhhHHHHHhcc--CCCc-------------------cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence            765544322111  0000                   0000111223456789999999999999999999999999999


Q ss_pred             ccccCC
Q 007177          310 YFKGLS  315 (614)
Q Consensus       310 ~f~~~~  315 (614)
                      ||+...
T Consensus       290 ~~~~~~  295 (303)
T 2vwi_A          290 FFQKAK  295 (303)
T ss_dssp             TC----
T ss_pred             hhhcCC
Confidence            998653


No 141
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=9.8e-45  Score=368.96  Aligned_cols=257  Identities=29%  Similarity=0.475  Sum_probs=207.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++     .+.
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   83 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STP   83 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecC
Confidence            45789999999999999999999999999999999864211 112245788999999999999999999998     445


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+||||++ ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            67999999998 59999998888899999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y-~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..    ......+|+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+....+..+..            
T Consensus       164 ~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------  225 (276)
T 2h6d_A          164 GE----FLRTSCGSPNYAAPEVISG--RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG------------  225 (276)
T ss_dssp             -----------------CCTGGGTT--SCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------------
T ss_pred             Cc----ceecccCCccccCHHHHcC--CCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc------------
Confidence            22    1234578999999999876  343 6899999999999999999999988765444333311            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                     . ..   .....++..+.+||.+||+.||.+|||++++|+||||++.
T Consensus       226 ---------------~-~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          226 ---------------G-VF---YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             ---------------C-CC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ---------------C-cc---cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                           0 00   1113467899999999999999999999999999999753


No 142
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.3e-44  Score=375.22  Aligned_cols=258  Identities=27%  Similarity=0.458  Sum_probs=210.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...    .....+.+|+.+|+.++||||+++++++.     +..
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   97 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNT   97 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT----SCCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETT
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch----HHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCC
Confidence            357899999999999999999999999999999999753    23456889999999999999999999984     446


Q ss_pred             cEEEEEecCCC-cHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELMES-DLHQVIK-ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~-~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||+++ +|.+++. ....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        98 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A           98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            78999999985 9999987 456799999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ...   ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+....+..+..             
T Consensus       178 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------  239 (314)
T 3com_A          178 TMA---KRNTVIGTPFWMAPEVIQE--IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT-------------  239 (314)
T ss_dssp             TBS---CBCCCCSCGGGCCHHHHSS--SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-------------
T ss_pred             hcc---ccCccCCCCCccChhhcCC--CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-------------
Confidence            221   1234579999999999887  5789999999999999999999999987765443322211             


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                    ..... ......+++.+.+||.+||..||.+|||++++|+||||+...
T Consensus       240 --------------~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          240 --------------NPPPT-FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             --------------SCCCC-CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             --------------CCCcc-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence                          00000 011234678999999999999999999999999999998643


No 143
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=6.4e-45  Score=370.92  Aligned_cols=259  Identities=30%  Similarity=0.473  Sum_probs=216.1

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .++|++++.||+|+||.||+|.++.+++.||+|++............+.+|+.+|+.++||||+++++++..   .....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence            468999999999999999999999999999999998655556677789999999999999999999998743   23457


Q ss_pred             EEEEEecCCC-cHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCC-----eEeecCCCCcEEECCCCcEEEeecC
Q 007177           97 IYVVFELMES-DLHQVIKAN----DDLTREHYQFFLYQLLRALKYIHTAN-----VYHRDLKPKNILANANCKLKICDFG  166 (614)
Q Consensus        97 ~ylV~E~~~g-~L~~~i~~~----~~lse~~~~~i~~QIl~aL~yLHs~g-----IvHrDLKP~NILi~~~~~vKL~DFG  166 (614)
                      +|+||||+++ +|.+++...    ..+++..++.++.||+.||.|||+.|     |+||||||+|||++.++.+||+|||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            9999999985 999998653    34999999999999999999999999     9999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCc
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS  246 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~  246 (614)
                      +++......   .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+..      
T Consensus       162 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~------  230 (279)
T 2w5a_A          162 LARILNHDT---SFAKTFVGTPYYMSPEQMNR--MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE------  230 (279)
T ss_dssp             HHHHC---C---HHHHHHHSCCTTCCHHHHHC--C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------
T ss_pred             hheeecccc---ccccccCCCccccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh------
Confidence            998654322   11234578999999999877  5789999999999999999999999988775444433321      


Q ss_pred             hhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          247 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       247 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                           ..   +......+++.+.+||.+||..||.+|||++|+|+|+|+..
T Consensus       231 ---------------------~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          231 ---------------------GK---FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             ---------------------TC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ---------------------cc---cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence                                 00   01122357889999999999999999999999999999975


No 144
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-45  Score=391.69  Aligned_cols=263  Identities=24%  Similarity=0.385  Sum_probs=211.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEEC---CCCcEEEEEEecCccC--ChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKIHDIFE--HISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~---~tg~~vAIK~i~~~~~--~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~   91 (614)
                      ++|++++.||+|+||.||+|.+.   .+++.||||+++....  .......+.+|+.+|+.+ .||||+++++++     
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----  128 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----  128 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE-----
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE-----
Confidence            68999999999999999999984   5899999999874321  112334566899999999 699999999998     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+...+|||||||+ ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence            44567999999998 59999999888899999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......  ......+||+.|+|||++.+....++.++|||||||++|+|++|..||...........+..          
T Consensus       209 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~----------  276 (355)
T 1vzo_A          209 FVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR----------  276 (355)
T ss_dssp             CCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH----------
T ss_pred             cccCCC--CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH----------
Confidence            532221  12345689999999999875334688999999999999999999999976543222111110          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-----CHHHHHcCcccccC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-----TAEEALADPYFKGL  314 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-----sa~eiL~hp~f~~~  314 (614)
                               ...    ...    ......+++.+.+||.+||..||.+||     |++|+|+||||+.+
T Consensus       277 ---------~~~----~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          277 ---------RIL----KSE----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             ---------HHH----HCC----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             ---------HHh----ccC----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence                     010    000    112346788999999999999999999     99999999999875


No 145
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.6e-44  Score=375.05  Aligned_cols=266  Identities=23%  Similarity=0.404  Sum_probs=211.2

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCC-
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSR-   91 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~-   91 (614)
                      -...++|++++.||+|+||.||+|.+..+|+.||||++....   .....+.+|+.+|+.+ +||||+++++++..... 
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            456789999999999999999999999999999999986432   2345678999999998 79999999999865321 


Q ss_pred             CCCCcEEEEEecCCC-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           92 RDFKDIYVVFELMES-DLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        92 ~~~~~~ylV~E~~~g-~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                      .....+|+|||||++ +|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  176 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS  176 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence            124679999999985 999999864  47999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCC
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~---~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      ........   ......||+.|+|||++...   ...++.++|||||||++|+|++|..||.+.+....+..+..     
T Consensus       177 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----  248 (326)
T 2x7f_A          177 AQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-----  248 (326)
T ss_dssp             C----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----
T ss_pred             eecCcCcc---ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-----
Confidence            76532211   12345799999999998621   14688999999999999999999999988765544333211     


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           ...+   ......+++.+.+||.+||..||.+|||++++|+||||++.
T Consensus       249 ---------------------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          249 ---------------------NPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             ---------------------SCCC---CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             ---------------------Cccc---cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence                                 0000   11124578899999999999999999999999999999864


No 146
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.8e-44  Score=379.06  Aligned_cols=262  Identities=24%  Similarity=0.406  Sum_probs=211.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHH-HHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKL-LRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~i-L~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      -..++|++++.||+|+||.||+|.+..+|+.||||++...... .....+..|+.+ ++.++||||+++++++.     +
T Consensus        48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~-----~  121 (340)
T 3an0_A           48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALF-----R  121 (340)
T ss_dssp             CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEE-----C
T ss_pred             EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEE-----e
Confidence            3457899999999999999999999999999999999765433 344556666665 77889999999999984     4


Q ss_pred             CCcEEEEEecCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           94 FKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~----~~~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                      .+.+|+|||||+++|.+++.    ....+++..++.|+.||+.||.|||+. ||+||||||+|||++.++.+||+|||++
T Consensus       122 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  201 (340)
T 3an0_A          122 EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS  201 (340)
T ss_dssp             SSCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred             CCcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            46799999999999988876    356899999999999999999999987 9999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCccccccc--CCCCCCcccchhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhhhCCC
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN-VVHQLDLMTDLLGTP  245 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~--~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~-~~~~l~~i~~~~g~p  245 (614)
                      +.....    .......||+.|+|||++.+.  ...++.++|||||||++|+|++|+.||.+.. ....+..+..     
T Consensus       202 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-----  272 (340)
T 3an0_A          202 GYLVDS----VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-----  272 (340)
T ss_dssp             HHHSCH----HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----
T ss_pred             eecccc----cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc-----
Confidence            865321    112335799999999997431  1468999999999999999999999997643 2222222211     


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                           ...+.   .....+++.+.+||.+||..||++|||+.|+|+||||+...
T Consensus       273 ---------------------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  318 (340)
T 3an0_A          273 ---------------------EPSPQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  318 (340)
T ss_dssp             ---------------------SCCCC---CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred             ---------------------CCCCC---CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence                                 00000   01124688999999999999999999999999999998543


No 147
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3.7e-44  Score=373.41  Aligned_cols=256  Identities=25%  Similarity=0.381  Sum_probs=206.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+  +|..||||++............+.+|+.+|+.++||||+++++++     .+..
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~  107 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQPP  107 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSTT
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence            346899999999999999999976  688999999987655666778899999999999999999999998     4445


Q ss_pred             cEEEEEecCC-CcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           96 DIYVVFELME-SDLHQVIKANDD---LTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~~---lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      .+|+|||||+ ++|.+++.....   +++..+..++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            6899999998 599999987653   999999999999999999999999  9999999999999999999999999997


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .......   ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+...        
T Consensus       188 ~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~--------  254 (309)
T 3p86_A          188 LKASTFL---SSKSAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK--------  254 (309)
T ss_dssp             -----------------CCTTSCHHHHTT--CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS--------
T ss_pred             ccccccc---ccccCCCCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--------
Confidence            5433221   1234679999999999987  67899999999999999999999999887765444333110        


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc--Ccccc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA--DPYFK  312 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~--hp~f~  312 (614)
                                        ...   ......+++.+.+||.+||..||.+|||++++++  ++|++
T Consensus       255 ------------------~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          255 ------------------CKR---LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             ------------------CCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             ------------------CCC---CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                              001   1123467899999999999999999999999987  45554


No 148
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=377.13  Aligned_cols=258  Identities=23%  Similarity=0.339  Sum_probs=212.3

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCc---EEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecC
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGE---KVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLP   88 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~   88 (614)
                      ...-..++|++.+.||+|+||.||+|.+..++.   .||||+++.. ........+.+|+.+|+.++||||+++++++  
T Consensus        43 ~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--  119 (325)
T 3kul_A           43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVV--  119 (325)
T ss_dssp             CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--
T ss_pred             ccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--
Confidence            344456899999999999999999999987665   4999999753 2445567889999999999999999999998  


Q ss_pred             CCCCCCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecC
Q 007177           89 PSRRDFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG  166 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFG  166 (614)
                         .+...+|+|||||+ ++|.+++... ..+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||
T Consensus       120 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  196 (325)
T 3kul_A          120 ---TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG  196 (325)
T ss_dssp             ---CGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             ---EeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC
Confidence               44567899999998 5999999764 579999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCC
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTP  245 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p  245 (614)
                      +++................+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+.+..+....   
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~---  271 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY---  271 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC---
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC---
Confidence            99876544333323344567889999999976  578999999999999999999 999998887665554442211   


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                              ..   .....+++.+.+||.+||..||.+|||+.++++
T Consensus       272 ------------------------~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          272 ------------------------RL---PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ------------------------CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------------CC---CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                                    00   122457889999999999999999999999987


No 149
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.2e-44  Score=375.29  Aligned_cols=278  Identities=21%  Similarity=0.353  Sum_probs=211.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+|+.++||||+++++++...   +.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~   81 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TT   81 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TT
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CC
Confidence            446789999999999999999999999999999999975321 22356678999999999999999999988543   23


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE----CCCCcEEEeecC
Q 007177           95 KDIYVVFELME-SDLHQVIKAND---DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA----NANCKLKICDFG  166 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~---~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi----~~~~~vKL~DFG  166 (614)
                      ..+|+|||||+ ++|.+++....   .+++..++.|+.||+.||.|||+.||+||||||+|||+    +.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             CCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             ceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            47899999998 69999998644   39999999999999999999999999999999999999    788889999999


Q ss_pred             ccccccCCCCCccccccccCCccccCccccccc------CCCCCCcccchhHHHHHHHHHhCCCCCCCCChh-HHHHHHH
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLMT  239 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~-~~l~~i~  239 (614)
                      +++.......    ....+||+.|+|||++...      ...++.++|||||||++|+|++|..||...... .....+.
T Consensus       162 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  237 (319)
T 4euu_A          162 AARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY  237 (319)
T ss_dssp             TCEECCTTCC----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHH
T ss_pred             CceecCCCCc----eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHH
Confidence            9987544322    2345799999999987521      157899999999999999999999999754321 1112222


Q ss_pred             hhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCC-------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcc
Q 007177          240 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-------FPNADPSALRLLERLLAFDPKDRPTAEEALADPY  310 (614)
Q Consensus       240 ~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~  310 (614)
                      ..+.......+..+...          ......+...       ...++..+.+||.+||+.||++|||++|+|+||-
T Consensus       238 ~~~~~~p~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          238 KIITGKPSGAISGVQKA----------ENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHHHCCTTCCEEEECS----------TTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             HHhcCCCcccchhhhcc----------cCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            21111111111110000          0011111111       1234567899999999999999999999999974


No 150
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=9e-44  Score=367.43  Aligned_cols=257  Identities=26%  Similarity=0.407  Sum_probs=216.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ....+|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+|+.++||||+++++++.     +.
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~   92 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KD   92 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cC
Confidence            334679999999999999999999999999999999975422 234677889999999999999999999984     44


Q ss_pred             CcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..+|+||||+++ +|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        93 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A           93 TKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             TEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             CeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            679999999985 89988864 5799999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                      ...   ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||...+....+..+..             
T Consensus       172 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------  233 (303)
T 3a7i_A          172 TQI---KRNTFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-------------  233 (303)
T ss_dssp             TBC---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-------------
T ss_pred             ccc---ccCccCCCcCccCHHHHhc--CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-------------
Confidence            221   1245679999999999987  6789999999999999999999999987765443332211             


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                    ...   ......++..+.+||.+||..||.+|||++++|+||||..
T Consensus       234 --------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          234 --------------NNP---PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             --------------SCC---CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             --------------CCC---CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence                          111   1123467889999999999999999999999999999975


No 151
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=3.5e-44  Score=373.89  Aligned_cols=268  Identities=22%  Similarity=0.346  Sum_probs=196.8

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCc---EEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGE---KVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ....++|++++.||+|+||.||+|.+..++.   .||||+++...........+.+|+.+|+.++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            3456789999999999999999999887775   8999999865445566788999999999999999999999986542


Q ss_pred             CC-CCCcEEEEEecCCC-cHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEE
Q 007177           91 RR-DFKDIYVVFELMES-DLHQVIKAND------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKI  162 (614)
Q Consensus        91 ~~-~~~~~ylV~E~~~g-~L~~~i~~~~------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL  162 (614)
                      .. .....|+|||||.+ +|.+++....      .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEE
Confidence            21 12235999999994 9999986532      5999999999999999999999999999999999999999999999


Q ss_pred             eecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhh
Q 007177          163 CDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDL  241 (614)
Q Consensus       163 ~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~  241 (614)
                      +|||+++........ .......+++.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+..+....+...
T Consensus       179 ~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~  255 (323)
T 3qup_A          179 ADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLAD--NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG  255 (323)
T ss_dssp             CCCCC------------------CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred             eeccccccccccccc-cccccccCcccccCchhhcC--CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC
Confidence            999999865433221 11233457888999999887  679999999999999999999 99999888766555443221


Q ss_pred             hCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCC-------HHHHHcCcccccC
Q 007177          242 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT-------AEEALADPYFKGL  314 (614)
Q Consensus       242 ~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rps-------a~eiL~hp~f~~~  314 (614)
                                                 .   .....+.+++.+.+||.+||..||.+|||       ++++++|||+...
T Consensus       256 ---------------------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          256 ---------------------------N---RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             ---------------------------C---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             ---------------------------C---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence                                       0   01123467889999999999999999999       7888899999753


No 152
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.4e-43  Score=368.41  Aligned_cols=262  Identities=23%  Similarity=0.282  Sum_probs=211.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      -..++|++.+.||+|+||.||+|.+.   ..+|+|+++...........+.+|+.+|+.++||||+++++++.      .
T Consensus        33 i~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~  103 (307)
T 3lb7_A           33 IEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------K  103 (307)
T ss_dssp             CCTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------S
T ss_pred             ecccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------c
Confidence            45689999999999999999999753   36999998865566667788999999999999999999999873      2


Q ss_pred             CcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..+|+|||||. ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~  183 (307)
T 3lb7_A          104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred             CcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence            44799999998 599999974 5579999999999999999999999999999999999999999999999999997543


Q ss_pred             CCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .... ........||+.|+|||++... ...++.++|||||||++|+|++|+.||.+.+..+.+..+...          
T Consensus       184 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~----------  252 (307)
T 3lb7_A          184 RWSG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR----------  252 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH----------
T ss_pred             cccc-cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc----------
Confidence            2111 1123446799999999988521 156889999999999999999999999887765554333211          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF  311 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f  311 (614)
                                     ......+...+..+++.+.+||.+||+.||.+|||+.+++++.+.
T Consensus       253 ---------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          253 ---------------GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             ---------------TCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             ---------------CCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence                           111223344556788999999999999999999999999998664


No 153
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=7.4e-44  Score=369.59  Aligned_cols=263  Identities=21%  Similarity=0.332  Sum_probs=195.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++............+.++..+++.++||||+++++++.     +..
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~   97 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNT   97 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCC
Confidence            456899999999999999999999999999999999754333333334445556788889999999999984     456


Q ss_pred             cEEEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||+++.+..+... ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus        98 ~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            7999999997666666654 56799999999999999999999995 999999999999999999999999999976543


Q ss_pred             CCCCccccccccCCccccCcccccc---cCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhhhCCCchhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN-VVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~---~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~-~~~~l~~i~~~~g~p~~~~  249 (614)
                      ...    .....+|+.|+|||++..   ....++.++|||||||++|+|++|..||.... ..+.+..+..         
T Consensus       178 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---------  244 (318)
T 2dyl_A          178 DKA----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ---------  244 (318)
T ss_dssp             -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH---------
T ss_pred             Ccc----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc---------
Confidence            221    234579999999999852   11568899999999999999999999997643 2222222211         


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                        ... ........+++.+.+||.+||..||.+|||++++|+||||+++.
T Consensus       245 ------------------~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          245 ------------------EEP-PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             ------------------SCC-CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             ------------------cCC-CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence                              111 11112346789999999999999999999999999999998653


No 154
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.5e-44  Score=378.54  Aligned_cols=273  Identities=20%  Similarity=0.333  Sum_probs=212.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh---------------HHHHHHHHHHHHHHhcCCCCcce
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI---------------SDAARILREIKLLRLLRHPDIVE   81 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~---------------~~~~~i~~Ei~iL~~L~HpnIv~   81 (614)
                      .++|++++.||+|+||.||+|.+  +|+.||||++.......               .....+.+|+.+|+.++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            47899999999999999999998  89999999986432111               11267889999999999999999


Q ss_pred             eeeEecCCCCCCCCcEEEEEecCCC-cHHHH------HHh--CCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeecCCCCc
Q 007177           82 IKHIMLPPSRRDFKDIYVVFELMES-DLHQV------IKA--NDDLTREHYQFFLYQLLRALKYIHT-ANVYHRDLKPKN  151 (614)
Q Consensus        82 l~~v~~~~~~~~~~~~ylV~E~~~g-~L~~~------i~~--~~~lse~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~N  151 (614)
                      +++++     .+.+.+|+|||||++ +|.++      +..  ...+++..++.++.||+.||.|||+ .||+||||||+|
T Consensus       108 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          108 CEGII-----TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             CSEEE-----ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             EEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            99998     345679999999995 99988      655  5679999999999999999999999 999999999999


Q ss_pred             EEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCC-cccchhHHHHHHHHHhCCCCCCCCC
Q 007177          152 ILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAEVLTGKPLFPGKN  230 (614)
Q Consensus       152 ILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~-~~DIWSLG~Il~eLltG~~pF~g~~  230 (614)
                      ||++.++.+||+|||++......     ......||+.|+|||++.+. ..++. ++|||||||++|+|++|..||.+.+
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  256 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNE-SSYNGAKVDIWSLGICLYVMFYNVVPFSLKI  256 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSC-CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEEcCCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCC-CCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999865432     22456799999999998762 25666 9999999999999999999998877


Q ss_pred             h-hHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCc
Q 007177          231 V-VHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP  309 (614)
Q Consensus       231 ~-~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp  309 (614)
                      . .+....+.......... ....           ...............+++.+.+||.+||+.||.+|||++|+|+||
T Consensus       257 ~~~~~~~~i~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp  324 (348)
T 2pml_X          257 SLVELFNNIRTKNIEYPLD-RNHF-----------LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE  324 (348)
T ss_dssp             CSHHHHHHHTSCCCCCCCS-SSSS-----------TTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             cHHHHHHHHhccCcCCccc-hhhh-----------hccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            6 44444332211000000 0000           000000001112256889999999999999999999999999999


Q ss_pred             ccccC
Q 007177          310 YFKGL  314 (614)
Q Consensus       310 ~f~~~  314 (614)
                      ||++.
T Consensus       325 ~f~~~  329 (348)
T 2pml_X          325 WLADT  329 (348)
T ss_dssp             GGTTC
T ss_pred             cccCC
Confidence            99864


No 155
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=3.2e-44  Score=375.14  Aligned_cols=263  Identities=26%  Similarity=0.434  Sum_probs=193.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHH-HHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIK-LLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~-iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++.... .......+.+|+. +++.++||||+++++++.     +.
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~   93 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----RE   93 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CS
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eC
Confidence            4578999999999999999999999999999999997542 3344555666766 677789999999999984     45


Q ss_pred             CcEEEEEecCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           95 KDIYVVFELMESDLHQVIKA-----NDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~-----~~~lse~~~~~i~~QIl~aL~yLHs~-gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                      +..|+||||++++|.+++..     ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~  173 (327)
T 3aln_A           94 GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS  173 (327)
T ss_dssp             SEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred             CceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence            67999999999998888863     56799999999999999999999999 9999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCccccccc--CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCc
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS  246 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~--~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~  246 (614)
                      +.......    .....||+.|+|||++...  ...++.++|||||||++|+|++|..||.+.+....  .+        
T Consensus       174 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~--------  239 (327)
T 3aln_A          174 GQLVDSIA----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--QL--------  239 (327)
T ss_dssp             CC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------
T ss_pred             eecccccc----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--HH--------
Confidence            76543221    2334799999999998321  15689999999999999999999999976542110  00        


Q ss_pred             hhhhhhhhchhHHHHHHhhcccCCCcc-cCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          247 LDTISRVRNDKARRYLTSMRKKQPVQF-SQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       247 ~~~i~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                      ..+.......+ ...+..+++.+.+||.+||..||.+|||+.++|+||||...
T Consensus       240 ----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          240 ----------------TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             ----------------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ----------------HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence                            00001111111 12335688999999999999999999999999999999754


No 156
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.1e-43  Score=377.19  Aligned_cols=253  Identities=25%  Similarity=0.414  Sum_probs=209.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEEC-------CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDT-------HTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLP   88 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~-------~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~   88 (614)
                      .++|++++.||+|+||.||+|.+.       .++..||||+++.. ........+.+|+.+|+.+ +||||+++++++  
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--  156 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--  156 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE--
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE--
Confidence            468999999999999999999875       34567999999754 3345667899999999999 899999999998  


Q ss_pred             CCCCCCCcEEEEEecCC-CcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCc
Q 007177           89 PSRRDFKDIYVVFELME-SDLHQVIKAND----------------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKN  151 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~-g~L~~~i~~~~----------------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N  151 (614)
                         .+.+.+|+|||||+ |+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|
T Consensus       157 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          157 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             ---CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             ---ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence               44567899999998 59999998653                48999999999999999999999999999999999


Q ss_pred             EEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCC
Q 007177          152 ILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN  230 (614)
Q Consensus       152 ILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~  230 (614)
                      ||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..|+.++|||||||++|||++ |..||.+.+
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHT--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEECCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999999999999999865433221 11234567889999999877  679999999999999999999 999998877


Q ss_pred             hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          231 VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       231 ~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ..+.+..+..                           ...   ......+++.+.+||.+||..||.+|||+.|++++
T Consensus       311 ~~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          311 VEELFKLLKE---------------------------GHR---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             GGGHHHHHHT---------------------------TCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhc---------------------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5544433311                           000   11224678899999999999999999999999874


No 157
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=8.8e-44  Score=374.68  Aligned_cols=267  Identities=26%  Similarity=0.407  Sum_probs=188.6

Q ss_pred             cccCCCCCCeEEEe-EeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHH-HHHHhcCCCCcceeeeEecC
Q 007177           11 FSEYGDASRYKIQE-VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREI-KLLRLLRHPDIVEIKHIMLP   88 (614)
Q Consensus        11 ~~~~~~~~rY~i~~-~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei-~iL~~L~HpnIv~l~~v~~~   88 (614)
                      ...+...++|++++ .||+|+||.||+|.++.+|+.||||++...   ..    ..+|+ ..++.+.||||+++++++..
T Consensus        21 ~~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~----~~~e~~~~~~~~~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           21 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PK----ARQEVDHHWQASGGPHIVCILDVYEN   93 (336)
T ss_dssp             CBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HH----HHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             CCCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HH----HHHHHHHHHHhcCCCChHHHHHHHhh
Confidence            34466678999965 699999999999999999999999998642   11    22233 34567799999999999843


Q ss_pred             CCCCCCCcEEEEEecCCC-cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC---CcEEE
Q 007177           89 PSRRDFKDIYVVFELMES-DLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN---CKLKI  162 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g-~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~---~~vKL  162 (614)
                      .. .+...+|+|||||++ +|.+++....  .+++..++.|+.||+.||.|||+.||+||||||+|||++.+   +.+||
T Consensus        94 ~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl  172 (336)
T 3fhr_A           94 MH-HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKL  172 (336)
T ss_dssp             EE-TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEE
T ss_pred             cc-CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEE
Confidence            21 224568999999985 9999998764  69999999999999999999999999999999999999864   45999


Q ss_pred             eecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhh
Q 007177          163 CDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL  242 (614)
Q Consensus       163 ~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~  242 (614)
                      +|||+++......     ....++|+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+.   
T Consensus       173 ~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---  242 (336)
T 3fhr_A          173 TDFGFAKETTQNA-----LQTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---  242 (336)
T ss_dssp             CCCTTCEEC-----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred             eccccceeccccc-----cccCCCCcCccChhhhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH---
Confidence            9999998654322     234578999999999876  578899999999999999999999997765322211110   


Q ss_pred             CCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          243 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       243 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                          ..+...........+..+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       243 --------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          243 --------------------RRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             ----------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             --------------------HhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence                                00001111112234567899999999999999999999999999999998653


No 158
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=5.3e-44  Score=370.68  Aligned_cols=260  Identities=24%  Similarity=0.421  Sum_probs=210.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++..  ........+.+|+.+|+.++||||+++++++.     +..
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~   80 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDK   80 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETT
T ss_pred             ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCC
Confidence            35689999999999999999999999999999999864  34566778999999999999999999999984     456


Q ss_pred             cEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      ..|+|||||+ ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           81 RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD  160 (310)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred             eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence            7999999998 599999987 56799999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCc-----------cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhh
Q 007177          174 DTPTT-----------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL  242 (614)
Q Consensus       174 ~~~~~-----------~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~  242 (614)
                      .....           ......+||+.|+|||++.+  ..++.++|||||||++|+|++|..||........        
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--------  230 (310)
T 3s95_A          161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING--RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM--------  230 (310)
T ss_dssp             -------------------CCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT--------
T ss_pred             ccccccccccccccccccccccCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH--------
Confidence            32211           01124689999999999987  6899999999999999999999999976432100        


Q ss_pred             CCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          243 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       243 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                            ..    .......+..          ...+.+++.+.+||.+||+.||.+|||++++++  |++.+
T Consensus       231 ------~~----~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~l  280 (310)
T 3s95_A          231 ------DF----GLNVRGFLDR----------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLETL  280 (310)
T ss_dssp             ------TS----SBCHHHHHHH----------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHHH
T ss_pred             ------HH----hhhhhccccc----------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHHH
Confidence                  00    0001111111          112467889999999999999999999999987  55543


No 159
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.8e-43  Score=362.89  Aligned_cols=262  Identities=28%  Similarity=0.419  Sum_probs=202.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC-------
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS-------   90 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~-------   90 (614)
                      ++|++++.||+|+||.||+|.+..+|+.||||++..   .......+.+|+.+|+.++||||+++++++....       
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            579999999999999999999999999999999964   2345677889999999999999999999875421       


Q ss_pred             -CCCCCcEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           91 -RRDFKDIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        91 -~~~~~~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                       ..+...+|+|||||+ ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             123567999999998 59999998644 688999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCC-----------CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC-ChhHHH
Q 007177          168 ARVAFNDTP-----------TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK-NVVHQL  235 (614)
Q Consensus       168 a~~~~~~~~-----------~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~-~~~~~l  235 (614)
                      +........           .........||+.|+|||++.+. ..++.++|||||||++|+|++   ||... +..+.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~  238 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL  238 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSC-SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCC-CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHH
Confidence            976532210           01122456799999999998752 468999999999999999998   45322 111111


Q ss_pred             HHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          236 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       236 ~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                      ..+                           ...............++.+.+||.+||..||.+|||++++|+||||+.
T Consensus       239 ~~~---------------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          239 KKL---------------------------RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHH---------------------------HSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             Hhc---------------------------cccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            111                           111111111223456788999999999999999999999999999974


No 160
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.8e-43  Score=367.17  Aligned_cols=264  Identities=26%  Similarity=0.343  Sum_probs=208.6

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC--CCCcceeeeEecCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR--HPDIVEIKHIMLPPSR   91 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~--HpnIv~l~~v~~~~~~   91 (614)
                      ....++|++++.||+|+||.||+|.+. +++.||||++............+.+|+.+|+.++  ||||+++++++.    
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~----   98 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----   98 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE----
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee----
Confidence            345578999999999999999999885 5889999999765555667788999999999997  599999999983    


Q ss_pred             CCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           92 RDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        92 ~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                       +...+|+|||++.++|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++ ++.+||+|||+++..
T Consensus        99 -~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~  176 (313)
T 3cek_A           99 -TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  176 (313)
T ss_dssp             -CSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-
T ss_pred             -cCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccc
Confidence             456799999987789999999988999999999999999999999999999999999999996 479999999999865


Q ss_pred             cCCCCCccccccccCCccccCccccccc---------CCCCCCcccchhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLMTDL  241 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~---------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~-~~l~~i~~~  241 (614)
                      ..... ........||+.|+|||++.+.         ...++.++|||||||++|+|++|..||...... ..+..+   
T Consensus       177 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~---  252 (313)
T 3cek_A          177 QPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI---  252 (313)
T ss_dssp             --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH---
T ss_pred             cCccc-cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH---
Confidence            43322 1122345799999999998641         136888999999999999999999999765321 111111   


Q ss_pred             hCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          242 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       242 ~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                             +......   ......+..+.+||.+||..||.+|||++|+|+||||+..
T Consensus       253 -----------------------~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          253 -----------------------IDPNHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             -----------------------HCTTSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             -----------------------Hhccccc---CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence                                   0011111   1123457889999999999999999999999999999854


No 161
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2e-43  Score=362.43  Aligned_cols=258  Identities=28%  Similarity=0.415  Sum_probs=204.2

Q ss_pred             eEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcEEE
Q 007177           20 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYV   99 (614)
Q Consensus        20 Y~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~yl   99 (614)
                      |.....||+|+||.||+|.+..++..||||++...  .......+.+|+.+++.++||||+++++++     .+.+.+|+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~l   96 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKI   96 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEE
Confidence            33344899999999999999999999999998753  234456788999999999999999999998     34567999


Q ss_pred             EEecCC-CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC-CCcEEEeecCccccccCC
Q 007177          100 VFELME-SDLHQVIKAND---DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA-NCKLKICDFGLARVAFND  174 (614)
Q Consensus       100 V~E~~~-g~L~~~i~~~~---~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~-~~~vKL~DFGla~~~~~~  174 (614)
                      ||||++ ++|.+++....   .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++......
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~  176 (295)
T 2clq_A           97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI  176 (295)
T ss_dssp             EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred             EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence            999997 69999997652   4679999999999999999999999999999999999987 889999999999865432


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      ..   ......||+.|+|||++.+....++.++|||||||++|+|++|..||.+..........                
T Consensus       177 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----------------  237 (295)
T 2clq_A          177 NP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK----------------  237 (295)
T ss_dssp             -------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH----------------
T ss_pred             CC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh----------------
Confidence            21   12345799999999998653234889999999999999999999999654322111000                


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                              ......    .......+++.+.+||.+||..||++|||++++|+||||+...
T Consensus       238 --------~~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          238 --------VGMFKV----HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             --------HHHHCC----CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             --------hccccc----cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence                    000000    0122346789999999999999999999999999999998543


No 162
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.3e-43  Score=374.81  Aligned_cols=256  Identities=25%  Similarity=0.406  Sum_probs=209.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEE-----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAI-----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~-----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~   89 (614)
                      ..++|++++.||+|+||.||+|.     +..+++.||||+++.. ........+.+|+.+|+.+ +||||+++++++.. 
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-   97 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-   97 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec-
Confidence            35789999999999999999998     5567789999999753 3345567789999999999 79999999999843 


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhCCC---------------------------------------------------
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKANDD---------------------------------------------------  117 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~~~---------------------------------------------------  117 (614)
                         ....+|+|||||. |+|.+++.....                                                   
T Consensus        98 ---~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           98 ---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ---TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             ---CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence               2345899999999 599999986543                                                   


Q ss_pred             ---------------CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCCCccccc
Q 007177          118 ---------------LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT  182 (614)
Q Consensus       118 ---------------lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~  182 (614)
                                     +++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........ ....
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~  253 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKG  253 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC-EEC-
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc-hhcc
Confidence                           899999999999999999999999999999999999999999999999999865433221 2234


Q ss_pred             cccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHH
Q 007177          183 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRY  261 (614)
Q Consensus       183 ~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~  261 (614)
                      ...||+.|+|||++.+  ..|+.++|||||||++|+|++ |..||.+.+..+.+......                    
T Consensus       254 ~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~--------------------  311 (359)
T 3vhe_A          254 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE--------------------  311 (359)
T ss_dssp             -CEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH--------------------
T ss_pred             ccCCCceeEChhhhcC--CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc--------------------
Confidence            5678999999999876  689999999999999999998 99999887654433222110                    


Q ss_pred             HHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          262 LTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                            ...   ......+++.+.+||.+||+.||.+|||++|+++|
T Consensus       312 ------~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          312 ------GTR---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCC---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                  001   11123578899999999999999999999999986


No 163
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=5.8e-44  Score=380.90  Aligned_cols=257  Identities=21%  Similarity=0.309  Sum_probs=210.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEE-----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAI-----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~-----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .++|++++.||+|+||.||+|.     +..++..||||+++.. ........+.+|+.+|+.++||||+++++++.    
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----  144 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSL----  144 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe----
Confidence            4689999999999999999999     4567889999999743 34455667889999999999999999999984    


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC---cE
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKAND-------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC---KL  160 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~-------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~---~v  160 (614)
                       +....|+|||||. ++|.+++....       .+++..++.|+.||+.||.|||++||+||||||+|||++.++   .+
T Consensus       145 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          145 -QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             -SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             -cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence             4456799999997 59999997643       599999999999999999999999999999999999999655   59


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMT  239 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~  239 (614)
                      ||+|||+++........ .......+|+.|+|||++.+  ..|+.++|||||||++|||++ |..||.+.+..+.+..+.
T Consensus       224 kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~  300 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYY-RKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  300 (367)
T ss_dssp             EECCCHHHHHHHHHSSC-TTCCGGGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             EECCCcccccccccccc-ccCCCcCCcccEECHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999864322211 11234568999999999876  679999999999999999998 999999887665554442


Q ss_pred             hhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          240 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       240 ~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                      ...                           .   ......+++.+.+||.+||+.||.+|||++++++|.|+.
T Consensus       301 ~~~---------------------------~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          301 SGG---------------------------R---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTC---------------------------C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCC---------------------------C---CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            210                           0   011245788999999999999999999999999998764


No 164
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2.6e-43  Score=360.33  Aligned_cols=252  Identities=26%  Similarity=0.414  Sum_probs=199.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCC---CcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHT---GEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ..++|++.+.||+|+||.||+|.+..+   +..||+|++... ........+.+|+.+|+.++||||+++++++.     
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----   86 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-----   86 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-----
Confidence            346899999999999999999998754   456999998753 34455677899999999999999999999872     


Q ss_pred             CCCcEEEEEecCCC-cHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           93 DFKDIYVVFELMES-DLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        93 ~~~~~ylV~E~~~g-~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                       .+..|+||||+++ +|.+++.... .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence             2457999999995 9999998654 699999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .......  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+.+..+...        
T Consensus       166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~--------  233 (281)
T 1mp8_A          166 MEDSTYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--------  233 (281)
T ss_dssp             ---------------CCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT--------
T ss_pred             cCccccc--ccccCCCcccccChhhccc--CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC--------
Confidence            5432211  1233457789999999876  678999999999999999996 99999887765554443210        


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                         ..   ....+.+++.+.+||.+||..||.+|||+.+++++
T Consensus       234 -------------------~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          234 -------------------ER---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             -------------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------------CC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                               01   11235678999999999999999999999999774


No 165
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=5.1e-44  Score=373.54  Aligned_cols=254  Identities=26%  Similarity=0.418  Sum_probs=211.1

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhcC--CCCcceeeeEec
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLLR--HPDIVEIKHIML   87 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L~--HpnIv~l~~v~~   87 (614)
                      ....++|++++.||+|+||.||+|.+..+++.||||++.......    .....+.+|+.+|+.++  ||||+++++++ 
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~-  117 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF-  117 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE-
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE-
Confidence            345688999999999999999999999999999999997532211    12245668999999996  59999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC--CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC-CCCcEEEee
Q 007177           88 PPSRRDFKDIYVVFELME--SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-ANCKLKICD  164 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~--g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~-~~~~vKL~D  164 (614)
                          .+...+|+|||++.  ++|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+|||++ .++.+||+|
T Consensus       118 ----~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          118 ----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             ----ECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             ----ecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEee
Confidence                45567999999997  69999999888899999999999999999999999999999999999999 778999999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      ||+++......     .....||+.|+|||++.+. ..++.++|||||||++|+|++|..||.+.+.      +.     
T Consensus       194 fg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~-----  256 (320)
T 3a99_A          194 FGSGALLKDTV-----YTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------II-----  256 (320)
T ss_dssp             CTTCEECCSSC-----BCCCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH-----
T ss_pred             Ccccccccccc-----ccCCCCCccCCChHHhccC-CCCCccchHHhHHHHHHHHHHCCCCCCChhh------hh-----
Confidence            99998754322     2345799999999998752 2347889999999999999999999965321      00     


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                        .   ..  .   .....+++.+.+||.+||..||.+|||++|+|+||||++..
T Consensus       257 ------------------~---~~--~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          257 ------------------R---GQ--V---FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             ------------------H---CC--C---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ------------------c---cc--c---cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence                              0   00  0   11245788999999999999999999999999999998653


No 166
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.4e-43  Score=356.89  Aligned_cols=250  Identities=25%  Similarity=0.388  Sum_probs=207.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+. ++..||+|++......   ...+.+|+.+|+.++||||+++++++     .+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~   78 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQA   78 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSS
T ss_pred             ChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCC
Confidence            4568999999999999999999986 5778999999854322   35688999999999999999999998     4456


Q ss_pred             cEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||++ ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           79 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            7999999998 5999999754 4699999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ...  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+....          
T Consensus       159 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~----------  224 (269)
T 4hcu_A          159 DQY--TSSTGTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------  224 (269)
T ss_dssp             HHH--HSTTSTTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC----------
T ss_pred             ccc--ccccCcccccccCCHHHhcC--CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc----------
Confidence            211  11233467888999999876  679999999999999999999 999998887655554442210          


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                       .   .......++.+.+||.+||+.||.+|||+.++++|
T Consensus       225 -----------------~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          225 -----------------R---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             -----------------C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------c---CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                             0   01123468899999999999999999999999886


No 167
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=3.2e-43  Score=364.09  Aligned_cols=254  Identities=22%  Similarity=0.387  Sum_probs=211.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ..++|++.+.||+|+||.||+|.+.     .++..||||++... ........+.+|+.+|+.++||||+++++++    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----   95 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGAC----   95 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEE----
Confidence            3578999999999999999999883     45689999999753 3455667889999999999999999999998    


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhCCC------------------------CCHHHHHHHHHHHHHHHHHHHhCCeEee
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKANDD------------------------LTREHYQFFLYQLLRALKYIHTANVYHR  145 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~~~------------------------lse~~~~~i~~QIl~aL~yLHs~gIvHr  145 (614)
                       .+...+|+|||||. ++|.+++.....                        +++..++.++.||+.||.|||++||+||
T Consensus        96 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           96 -SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             -ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence             44566899999998 699999987543                        8999999999999999999999999999


Q ss_pred             cCCCCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCC
Q 007177          146 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKP  224 (614)
Q Consensus       146 DLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~  224 (614)
                      ||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~  251 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSY-VKRSQGRIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGN  251 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSCE-ECSSCCCSCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccchheEEEcCCCCEEEccccccccccccccc-eeccCCCCcccccChhhhcC--CCcCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999865433221 11234567889999999876  578999999999999999999 999


Q ss_pred             CCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 007177          225 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE  304 (614)
Q Consensus       225 pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e  304 (614)
                      ||.+.+.......+..                           ..   .......+++.+.+||.+||+.||.+|||+++
T Consensus       252 p~~~~~~~~~~~~~~~---------------------------~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  301 (314)
T 2ivs_A          252 PYPGIPPERLFNLLKT---------------------------GH---RMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD  301 (314)
T ss_dssp             SSTTCCGGGHHHHHHT---------------------------TC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCHHHHHHHhhc---------------------------CC---cCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9988775544433311                           00   11223467899999999999999999999999


Q ss_pred             HHcC
Q 007177          305 ALAD  308 (614)
Q Consensus       305 iL~h  308 (614)
                      ++++
T Consensus       302 l~~~  305 (314)
T 2ivs_A          302 ISKD  305 (314)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875


No 168
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3e-43  Score=361.60  Aligned_cols=259  Identities=18%  Similarity=0.228  Sum_probs=209.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++....    ....+.+|+.+++.+ +|+||+.+++++     .+.
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~   78 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEG   78 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EET
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCC
Confidence            4578999999999999999999999999999999986432    223577899999999 799999999988     455


Q ss_pred             CcEEEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc-----EEEeecCcc
Q 007177           95 KDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK-----LKICDFGLA  168 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~-----vKL~DFGla  168 (614)
                      ...|+||||+.++|.+++...+ .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.     +||+|||++
T Consensus        79 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~  158 (298)
T 1csn_A           79 LHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  158 (298)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence            6799999999889999998754 5999999999999999999999999999999999999987776     999999999


Q ss_pred             ccccCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          169 RVAFNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       169 ~~~~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      +.........    .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+....  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~--  234 (298)
T 1csn_A          159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG--  234 (298)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH--
T ss_pred             cccccccccccccccCccCCCCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH--
Confidence            8765432211    11245679999999999887  678999999999999999999999998854322221111100  


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                        .   ...........+.+++.+.+||.+||+.||.+|||++++++.
T Consensus       235 ------------------~---~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          235 ------------------E---KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             ------------------H---HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             ------------------h---hccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence                              0   000111222345678999999999999999999999999763


No 169
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.9e-43  Score=370.24  Aligned_cols=257  Identities=19%  Similarity=0.222  Sum_probs=205.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.....    ...+.+|+.+|+.| +||||+++++++     .+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~   77 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFG-----PCG   77 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEE-----EET
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecC
Confidence            45789999999999999999999999999999999864321    23577899999999 899999999998     445


Q ss_pred             CcEEEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc-----EEEeecCcc
Q 007177           95 KDIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK-----LKICDFGLA  168 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~-----vKL~DFGla  168 (614)
                      ...|+||||+.++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.     +||+|||++
T Consensus        78 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a  157 (330)
T 2izr_A           78 KYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA  157 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred             CccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence            67899999998899999986 467999999999999999999999999999999999999999887     999999999


Q ss_pred             ccccCCCCCcc----ccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          169 RVAFNDTPTTI----FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       169 ~~~~~~~~~~~----~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      +..........    .....+||+.|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+....+....  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~--  233 (330)
T 2izr_A          158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLG--KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG--  233 (330)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH--
T ss_pred             eeeecCCCCccccccccCCcCCCccccChHHHcC--CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH--
Confidence            87543322110    1245689999999999987  679999999999999999999999998865333222221100  


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        .   .....+........+ .+.+||..||..||.+||+++++++
T Consensus       234 ------------------~---~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          234 ------------------D---TKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             ------------------H---HHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ------------------h---hhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                              0   000001111112233 8999999999999999999999865


No 170
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=7.3e-43  Score=362.75  Aligned_cols=256  Identities=27%  Similarity=0.370  Sum_probs=201.7

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE-HISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++     .+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~  105 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EI  105 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----ee
Confidence            345789999999999999999999999999999999975432 334457788999999999999999999998     34


Q ss_pred             CCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           94 FKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        94 ~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      .+.+|+||||+++ +|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          106 DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            5679999999985 999999988889999999999999999999999999999999999999999999999999997654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....  .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+.             
T Consensus       186 ~~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-------------  248 (309)
T 2h34_A          186 DEKL--TQLGNTVGTLYYMAPERFSE--SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN-------------  248 (309)
T ss_dssp             -------------CCGGGCCGGGTCC------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH-------------
T ss_pred             cccc--ccccccCCCcCccCHHHHcC--CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc-------------
Confidence            3221  12234579999999999877  678999999999999999999999998765432211110             


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCC-CHHHHHc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP-TAEEALA  307 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rp-sa~eiL~  307 (614)
                                     ..........+.+++.+.+||.+||..||++|| +++++++
T Consensus       249 ---------------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          249 ---------------QAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             ---------------SCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             ---------------cCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                           111112233467889999999999999999999 8888765


No 171
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=2.4e-43  Score=362.85  Aligned_cols=271  Identities=21%  Similarity=0.354  Sum_probs=207.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEE----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAI----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ..++|++++.||+|+||.||+|.    +..+++.||||++..  ........+.+|+.+|+.++||||+++++++...  
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--   83 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--   83 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH--
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence            45789999999999999999998    667899999999975  3445667889999999999999999999988432  


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                       +...+|+|||||+ ++|.+++.... .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        84 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A           84 -GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  162 (295)
T ss_dssp             -HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred             -CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence             2245899999997 59999998754 59999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ................++..|+|||++.+  ..++.++|||||||++|+|++|..||.....     ......+......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~  235 (295)
T 3ugc_A          163 VLPQDKEFFKVKEPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPPA-----EFMRMIGNDKQGQ  235 (295)
T ss_dssp             -------------CTTCGGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH-----HHHHHHCTTCCTH
T ss_pred             cccCCcceeeeccCCCCccceeCcHHhcC--CCCChHHHHHHHHHHHHHHHhcccccCCChH-----HHHhhhcCccccc
Confidence            76443322222334567888999999887  6799999999999999999999999865432     1111222221111


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      .      ........+......   .....+++.+.+||.+||+.||.+|||++|+++
T Consensus       236 ~------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          236 M------IVFHLIELLKNNGRL---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             H------HHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             h------hHHHHHHHHhccCcC---CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            1      011111222222111   123467899999999999999999999999976


No 172
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=5.8e-43  Score=354.67  Aligned_cols=250  Identities=20%  Similarity=0.313  Sum_probs=207.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+. ++..||+|++.....   ....+.+|+.+|+.++||||+++++++     .+..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~   76 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEY   76 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSS
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCC
Confidence            3568999999999999999999775 577899999975432   235688999999999999999999998     4556


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||++ ++|.+++...+ .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            7999999997 58999997654 599999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ....  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+...           
T Consensus       157 ~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----------  221 (268)
T 3sxs_A          157 DQYV--SSVGTKFPVKWSAPEVFHY--FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----------  221 (268)
T ss_dssp             TCEE--ECCSCCCCGGGCCHHHHHH--SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----------
T ss_pred             hhhh--cccCCCcCcccCCHHHHhc--cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----------
Confidence            3221  1234456788999999876  578999999999999999999 99999887765544433210           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                      ...   ......++.+.+||.+||+.||.+|||+.++|++
T Consensus       222 ----------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          222 ----------------HRL---YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             ----------------CCC---CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCC---CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            000   1113467899999999999999999999999986


No 173
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=5.6e-43  Score=357.65  Aligned_cols=251  Identities=21%  Similarity=0.314  Sum_probs=206.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      -..++|++++.||+|+||.||+|.+. ++..||||++......   ...+.+|+.+|+.++||||+++++++     .+.
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~   91 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQ   91 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEE-----CSS
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEE-----ecC
Confidence            45679999999999999999999875 6778999999854322   35688999999999999999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..+|+|||||+ ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           92 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             SSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             CCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            67999999997 699999976 5679999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+.....        
T Consensus       172 ~~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------  239 (283)
T 3gen_A          172 DDEY--TSSVGSKFPVRWSPPEVLMY--SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR--------  239 (283)
T ss_dssp             CHHH--HSTTSTTSCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--------
T ss_pred             cccc--ccccCCccCcccCCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC--------
Confidence            2211  11233457788999999886  578999999999999999998 9999988776555544422110        


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                         .   ......++.+.+||.+||+.||.+|||++++|+|
T Consensus       240 -------------------~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          240 -------------------L---YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             -------------------C---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------------------C---CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                               0   1123457899999999999999999999999886


No 174
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=7.7e-43  Score=366.13  Aligned_cols=254  Identities=22%  Similarity=0.294  Sum_probs=209.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ..++|++++.||+|+||.||+|.+.     .+++.||||+++.. ........+.+|+.+|+.++||||+++++++    
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----  119 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVC----  119 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE----
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE----
Confidence            4578999999999999999999987     35589999999754 2344567789999999999999999999998    


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEee
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKAN------------------------DDLTREHYQFFLYQLLRALKYIHTANVYHR  145 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~------------------------~~lse~~~~~i~~QIl~aL~yLHs~gIvHr  145 (614)
                       .+...+|+|||||+ ++|.+++...                        ..+++..++.|+.||+.||.|||+.||+||
T Consensus       120 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~  198 (343)
T 1luf_A          120 -AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  198 (343)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             -ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence             44567899999998 5999999764                        569999999999999999999999999999


Q ss_pred             cCCCCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCC
Q 007177          146 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKP  224 (614)
Q Consensus       146 DLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~  224 (614)
                      ||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccc-cccCCCcccceecChhhhcc--CCcCcccccHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999865332211 11234568899999999876  579999999999999999999 999


Q ss_pred             CCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 007177          225 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE  304 (614)
Q Consensus       225 pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e  304 (614)
                      ||.+.+..+....+..                           ...   ......+++.+.+||.+||..||.+|||+.+
T Consensus       276 p~~~~~~~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  325 (343)
T 1luf_A          276 PYYGMAHEEVIYYVRD---------------------------GNI---LACPENCPLELYNLMRLCWSKLPADRPSFCS  325 (343)
T ss_dssp             TTTTSCHHHHHHHHHT---------------------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCCCCChHHHHHHHhC---------------------------CCc---CCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence            9988776544433321                           111   1122457889999999999999999999999


Q ss_pred             HHcC
Q 007177          305 ALAD  308 (614)
Q Consensus       305 iL~h  308 (614)
                      ++++
T Consensus       326 ~~~~  329 (343)
T 1luf_A          326 IHRI  329 (343)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874


No 175
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1e-42  Score=357.69  Aligned_cols=255  Identities=21%  Similarity=0.304  Sum_probs=208.1

Q ss_pred             CCCCCeEEEe-EeeecCceEEEEEEE--CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           15 GDASRYKIQE-VIGKGSYGVVCSAID--THTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        15 ~~~~rY~i~~-~LG~G~~G~V~~a~d--~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      -+.++|++.+ .||+|+||.||+|.+  ..+++.||||+++...........+.+|+.+++.++||||+++++++.    
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   88 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----   88 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC----
Confidence            4457899998 999999999999954  567889999999865444455678899999999999999999999882    


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                        ....|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus        89 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           89 --AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             --SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             --CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence              245899999998 59999999988899999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ...............+++.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+..         
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---------  235 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK---------  235 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT---------
T ss_pred             eccCCCcccccccCCCCceeeChHHhcc--CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---------
Confidence            6443332222233456788999999876  578899999999999999999 9999988776444333211         


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       236 ------------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          236 ------------------GER---MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             ------------------TCC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ------------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                              001   1122467899999999999999999999999976


No 176
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-43  Score=365.73  Aligned_cols=253  Identities=26%  Similarity=0.414  Sum_probs=202.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----HHHHHHHHHHHHHHhc----CCCCcceeeeEe
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----SDAARILREIKLLRLL----RHPDIVEIKHIM   86 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~~Ei~iL~~L----~HpnIv~l~~v~   86 (614)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++.......    .....+.+|+.+++.+    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            34578999999999999999999999999999999997532211    2334456899999998    899999999998


Q ss_pred             cCCCCCCCCcEEEEEec-CC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC-CCCcEEEe
Q 007177           87 LPPSRRDFKDIYVVFEL-ME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-ANCKLKIC  163 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~-~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~-~~~~vKL~  163 (614)
                           .+....|+|||+ +. ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus       108 -----~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          108 -----ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             ----------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             -----ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEE
Confidence                 344668999999 55 69999999888899999999999999999999999999999999999999 88999999


Q ss_pred             ecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          164 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       164 DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      |||+++......     .....||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+...      +.    
T Consensus       183 dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~----  246 (312)
T 2iwi_A          183 DFGSGALLHDEP-----YTDFDGTRVYSPPEWISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQE------IL----  246 (312)
T ss_dssp             CCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH----
T ss_pred             EcchhhhcccCc-----ccccCCcccccCceeeecC-CCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hh----
Confidence            999998754322     2446799999999998752 2334589999999999999999999965321      00    


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                                         .   ..     ......+++.+.+||.+||..||++|||++|+|+||||+...
T Consensus       247 -------------------~---~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          247 -------------------E---AE-----LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             -------------------H---TC-----CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             -------------------h---hc-----cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence                               0   00     011245788999999999999999999999999999998643


No 177
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.1e-42  Score=357.36  Aligned_cols=265  Identities=22%  Similarity=0.268  Sum_probs=202.4

Q ss_pred             ccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEec
Q 007177            8 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIML   87 (614)
Q Consensus         8 ~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~   87 (614)
                      ..+-...-..++|++.+.||+|+||.||+|.+.   ..||||+++...........+.+|+.+|+.++||||++++++. 
T Consensus        14 ~~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-   89 (289)
T 3og7_A           14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-   89 (289)
T ss_dssp             ----CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             CCCCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-
Confidence            334444566789999999999999999999653   3599999987666667778899999999999999999999965 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeec
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                           ....+++|||||+ ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+||
T Consensus        90 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Df  164 (289)
T 3og7_A           90 -----TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF  164 (289)
T ss_dssp             -----CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             -----cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccc
Confidence                 2345799999998 599999854 456999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCC
Q 007177          166 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       166 Gla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      |+++....... ........||+.|+|||++... ...++.++|||||||++|+|++|..||.+.+..+.+..+...   
T Consensus       165 g~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---  240 (289)
T 3og7_A          165 GLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR---  240 (289)
T ss_dssp             C-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH---
T ss_pred             eeccccccccc-cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc---
Confidence            99976432221 1123446799999999988521 156888999999999999999999999887655444333211   


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                            ......+......+++.+.+||.+||..||.+|||++++++
T Consensus       241 ----------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          241 ----------------------GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             ----------------------TSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------------cccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                                  11122233344578899999999999999999999999986


No 178
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-42  Score=370.48  Aligned_cols=254  Identities=24%  Similarity=0.403  Sum_probs=211.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCC-------CcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEec
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHT-------GEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIML   87 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~t-------g~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~   87 (614)
                      ..++|++.+.||+|+||.||+|.+..+       +..||||++... ........+.+|+.+|+.+ +||||+++++++ 
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-  144 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-  144 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeee-
Confidence            347899999999999999999997543       357999999754 3455667889999999999 899999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCC
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKAND----------------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK  150 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~----------------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~  150 (614)
                          .+.+.+|+|||||+ ++|.+++....                .+++..++.|+.||+.||.|||+.||+||||||+
T Consensus       145 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          145 ----TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             ----CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             ----ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence                44566899999998 59999998754                4999999999999999999999999999999999


Q ss_pred             cEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 007177          151 NILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGK  229 (614)
Q Consensus       151 NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~  229 (614)
                      |||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.
T Consensus       221 NIll~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~ellt~g~~p~~~~  297 (382)
T 3tt0_A          221 NVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  297 (382)
T ss_dssp             GEEECTTCCEEECSCSCCCCSSCCCTT-CCCTTCCCGGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             eEEEcCCCcEEEcccCccccccccccc-ccccCCCCCcceeCHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999865432211 11234567889999999887  689999999999999999999 99999888


Q ss_pred             ChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          230 NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       230 ~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      +..+....+..                           ...   ......+++.+.+||.+||+.||.+|||++|++++
T Consensus       298 ~~~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          298 PVEELFKLLKE---------------------------GHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CHHHHHHHHHT---------------------------TCC---CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHc---------------------------CCC---CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            76554433321                           101   11124578899999999999999999999999986


No 179
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.7e-42  Score=362.68  Aligned_cols=261  Identities=24%  Similarity=0.350  Sum_probs=205.4

Q ss_pred             ccccCCCCCCeEEEeEeeecCceEEEEEEECCCC----cEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeE
Q 007177           10 FFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTG----EKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHI   85 (614)
Q Consensus        10 ~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg----~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v   85 (614)
                      .|...-..++|.+.+.||+|+||.||+|.+..++    ..||||++... ........+.+|+.+|+.++||||++++++
T Consensus        36 ~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  114 (333)
T 1mqb_A           36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGV  114 (333)
T ss_dssp             --CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            3445566789999999999999999999887654    35999999753 234556678899999999999999999999


Q ss_pred             ecCCCCCCCCcEEEEEecCCC-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEe
Q 007177           86 MLPPSRRDFKDIYVVFELMES-DLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKIC  163 (614)
Q Consensus        86 ~~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~  163 (614)
                      +     .+...+|||||||++ +|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+
T Consensus       115 ~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~  189 (333)
T 1mqb_A          115 I-----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS  189 (333)
T ss_dssp             E-----CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             E-----ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEEC
Confidence            8     455679999999985 999999764 579999999999999999999999999999999999999999999999


Q ss_pred             ecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhh
Q 007177          164 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLL  242 (614)
Q Consensus       164 DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~  242 (614)
                      |||+++................+|..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+... 
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-  266 (333)
T 1mqb_A          190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-  266 (333)
T ss_dssp             CCCC-----------------CCCGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-
T ss_pred             CCCcchhhccccccccccCCCCccccccCchhccc--CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-
Confidence            99999875443322222233456889999999876  679999999999999999998 99999887765444333211 


Q ss_pred             CCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          243 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       243 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                                ...   .....+++.+.+||.+||+.||.+||++.+++++
T Consensus       267 --------------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          267 --------------------------FRL---PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             --------------------------CCC---CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             --------------------------CcC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                      000   1123578899999999999999999999999874


No 180
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.8e-42  Score=353.18  Aligned_cols=251  Identities=22%  Similarity=0.327  Sum_probs=204.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHH-----HHHHHHHHHHHhcCCCCcceeeeEecCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-----ARILREIKLLRLLRHPDIVEIKHIMLPP   89 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~-----~~i~~Ei~iL~~L~HpnIv~l~~v~~~~   89 (614)
                      -..++|++.+.||+|+||.||+|.+..+++.||||++..........     ..+.+|+.+++.++||||+++++++...
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            34679999999999999999999999999999999986433222111     6788999999999999999999998432


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEECCCCc-----E
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILANANCK-----L  160 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~~~~~-----v  160 (614)
                             .++||||+. ++|.+.+... ..+++..+..++.||+.||.|||+.|  |+||||||+|||++.++.     +
T Consensus        96 -------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           96 -------PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             -------TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             -------CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeE
Confidence                   279999998 6998888654 47999999999999999999999999  999999999999988776     9


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHH--HHHH
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ--LDLM  238 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~--l~~i  238 (614)
                      ||+|||+++.....      .....||+.|+|||++.+....++.++|||||||++|+|++|..||.+.+..+.  ...+
T Consensus       169 kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  242 (287)
T 4f0f_A          169 KVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI  242 (287)
T ss_dssp             EECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH
T ss_pred             EeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH
Confidence            99999999753321      244679999999999854335688999999999999999999999977653222  1111


Q ss_pred             HhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          239 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       239 ~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ..                          ...   .......+++.+.+||.+||+.||.+|||++++++
T Consensus       243 ~~--------------------------~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          243 RE--------------------------EGL---RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HH--------------------------SCC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hc--------------------------cCC---CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            00                          000   11223467899999999999999999999999986


No 181
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-43  Score=387.03  Aligned_cols=258  Identities=28%  Similarity=0.404  Sum_probs=195.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCCCc
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      .+|.+.+.||+|+||.||. ....+|+.||||++.....     ..+.+|+.+|+.+ +||||+++++++     .+...
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~   92 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTE-----KDRQF   92 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEE-----EETTE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCE
Confidence            4699999999999999764 4467899999999964321     2246899999999 799999999988     45567


Q ss_pred             EEEEEecCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC-----CCcEEEeecCcccc
Q 007177           97 IYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA-----NCKLKICDFGLARV  170 (614)
Q Consensus        97 ~ylV~E~~~g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~-----~~~vKL~DFGla~~  170 (614)
                      +|||||||+++|.+++.... .+.+..+..|+.||+.||.|||+.||+||||||+|||++.     ...+||+|||+++.
T Consensus        93 ~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~  172 (432)
T 3p23_A           93 QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK  172 (432)
T ss_dssp             EEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred             EEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence            99999999999999998654 4666678899999999999999999999999999999953     23588999999987


Q ss_pred             ccCCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ..............+||++|+|||++.+. ...++.++||||||||+|+|++ |..||...... +...+   .+..   
T Consensus       173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~~~~~---~~~~---  245 (432)
T 3p23_A          173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-QANIL---LGAC---  245 (432)
T ss_dssp             C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-HHHHH---TTCC---
T ss_pred             ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-HHHHH---hccC---
Confidence            65433222233557899999999998642 2467889999999999999999 89999554322 21111   1110   


Q ss_pred             hhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccC
Q 007177          249 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL  314 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~  314 (614)
                                           ...........+..+.+||.+||+.||.+|||++++|+||||..+
T Consensus       246 ---------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          246 ---------------------SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             ---------------------CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ---------------------CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence                                 011111112235568999999999999999999999999999764


No 182
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.1e-42  Score=356.03  Aligned_cols=251  Identities=22%  Similarity=0.423  Sum_probs=212.0

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      -..++|++.+.||+|+||.||+|.+..++..||||++...   ......+.+|+.+|+.++||||+++++++     .+.
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~   81 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TRE   81 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSS
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccC
Confidence            4567899999999999999999999999999999999742   34567788999999999999999999998     455


Q ss_pred             CcEEEEEecCC-CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ..+|+||||++ ++|.+++...  ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           82 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  161 (288)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred             CCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence            67999999999 6999999874  35999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+.......+...         
T Consensus       162 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~---------  228 (288)
T 3kfa_A          162 TGDTYT--AHAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD---------  228 (288)
T ss_dssp             CSSSSE--EETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT---------
T ss_pred             cCCccc--cccCCccccCcCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc---------
Confidence            433221  2234467889999999876  678999999999999999999 99999887755444333210         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        ..   ......+++.+.+||.+||..||.+|||++++++
T Consensus       229 ------------------~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          229 ------------------YR---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             ------------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CC---CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                              00   1122467889999999999999999999999976


No 183
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.6e-43  Score=368.47  Aligned_cols=275  Identities=22%  Similarity=0.240  Sum_probs=208.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      -..++|++++.||+|+||.||+|.+.  ++.||||++...   ........+|+.+|+.++||||+++++++.... ...
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~   94 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVD   94 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSS
T ss_pred             cchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCC
Confidence            34578999999999999999999775  789999999642   234455667999999999999999999985432 123


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC----------CeEeecCCCCcEEECCCCcEEEe
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA----------NVYHRDLKPKNILANANCKLKIC  163 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~----------gIvHrDLKP~NILi~~~~~vKL~  163 (614)
                      ..+|+|||||+ ++|.+++... .+++..++.|+.||+.||.|||+.          ||+||||||+|||++.++.+||+
T Consensus        95 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~  173 (322)
T 3soc_A           95 VDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA  173 (322)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred             ceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence            56899999998 5999999775 599999999999999999999999          99999999999999999999999


Q ss_pred             ecCccccccCCCCCccccccccCCccccCcccccccC---CCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 007177          164 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD  240 (614)
Q Consensus       164 DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~---~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~  240 (614)
                      |||+++........ ......+||+.|+|||++.+..   ..++.++|||||||++|||++|+.||.+......+.....
T Consensus       174 DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  252 (322)
T 3soc_A          174 DFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE  252 (322)
T ss_dssp             CCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred             cCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence            99999875443221 1224468999999999987521   2456688999999999999999999988654333222222


Q ss_pred             hhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCC--CCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          241 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFP--NADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       241 ~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ..+.|....+...        .  ........+...+.  ..++.+.+||.+||+.||++|||++|+++
T Consensus       253 ~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          253 IGQHPSLEDMQEV--------V--VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HCSSCCHHHHHHH--------H--TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccCCchhhhhhh--------h--hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3333333222111        0  01111111112221  12356999999999999999999999976


No 184
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.1e-42  Score=362.94  Aligned_cols=259  Identities=22%  Similarity=0.348  Sum_probs=191.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCC---CC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPS---RR   92 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~---~~   92 (614)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++..  ........+.+|+.+|+.+. ||||+++++++....   ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS--NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC--CchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            4589999999999999999999999999999999854  34456677889999999996 999999999985332   13


Q ss_pred             CCCcEEEEEecCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEECCCCcEEEeecCc
Q 007177           93 DFKDIYVVFELMESDLHQVIKA---NDDLTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        93 ~~~~~ylV~E~~~g~L~~~i~~---~~~lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      +...+|+|||||+|+|.+++..   .+.+++..++.|+.||+.||.|||+.|  |+||||||+|||++.++.+||+|||+
T Consensus       105 ~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          105 GQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             SSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             CCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            4556899999999999998865   567999999999999999999999999  99999999999999999999999999


Q ss_pred             cccccCCCCCc---------cccccccCCccccCcccccc-cCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 007177          168 ARVAFNDTPTT---------IFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL  237 (614)
Q Consensus       168 a~~~~~~~~~~---------~~~~~~vgt~~Y~APEvl~~-~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~  237 (614)
                      ++.........         .......||+.|+|||++.. ....++.++|||||||++|+|++|..||.+......+..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~  264 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG  264 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC
Confidence            98754332211         01124569999999999831 115688999999999999999999999976543221110


Q ss_pred             HHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcc
Q 007177          238 MTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPY  310 (614)
Q Consensus       238 i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~  310 (614)
                                                    ...   .......++.+.+||.+||+.||.+|||++|+++|-+
T Consensus       265 ------------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          265 ------------------------------KYS---IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             -------------------------------CC---CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ------------------------------ccc---CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence                                          000   0112345678999999999999999999999998743


No 185
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.4e-42  Score=360.18  Aligned_cols=261  Identities=20%  Similarity=0.299  Sum_probs=202.6

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECC---CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~---tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      -..++|++.+.||+|+||.||+|.+..   ++..||||+++...........+.+|+.+|+.++||||+++++++.....
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  110 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS  110 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence            345789999999999999999998765   55689999998655566677889999999999999999999999876544


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEee
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKA------NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICD  164 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~------~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~D  164 (614)
                      ......|+||||++ ++|.+++..      ...+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|
T Consensus       111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D  190 (313)
T 3brb_A          111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD  190 (313)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred             cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence            44456799999999 599999843      35699999999999999999999999999999999999999999999999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ||+++........ .......+++.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+.......+...  
T Consensus       191 fg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--  265 (313)
T 3brb_A          191 FGLSKKIYSGDYY-RQGRIAKMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG--  265 (313)
T ss_dssp             CSCC-----------------CCGGGSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT--
T ss_pred             cCcceeccccccc-CcccccCCCccccCchhhcC--CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC--
Confidence            9999865432211 11233467889999999977  689999999999999999999 99999887765544333210  


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                               ..   ......+++.+.+||.+||..||.+|||+.+++++
T Consensus       266 -------------------------~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          266 -------------------------HR---LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             -------------------------CC---CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------------------------CC---CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                     00   11224678899999999999999999999999875


No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.8e-42  Score=358.40  Aligned_cols=254  Identities=26%  Similarity=0.378  Sum_probs=209.6

Q ss_pred             CCCeEEEeEeeecCceEEEEEEE-----CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAID-----THTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPS   90 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~   90 (614)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||++... ........+.+|+.+|+.+ +||||+++++++.   
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~---   97 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACT---   97 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe---
Confidence            46899999999999999999985     457789999999753 3345567889999999999 8999999999983   


Q ss_pred             CCCCCcEEEEEecCCC-cHHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCc
Q 007177           91 RRDFKDIYVVFELMES-DLHQVIKAND------------------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKN  151 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~g-~L~~~i~~~~------------------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N  151 (614)
                        +.+..|+|||||++ +|.+++....                  .+++..++.++.||+.||.|||+.||+||||||+|
T Consensus        98 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A           98 --IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             --SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             --cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence              44568999999985 9999998754                  48999999999999999999999999999999999


Q ss_pred             EEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCC
Q 007177          152 ILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN  230 (614)
Q Consensus       152 ILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~  230 (614)
                      ||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+..
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             EEEcCCCCEEEccccccccccccccc-eeccCCCCcceeeChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            99999999999999999876543321 12234567889999999876  679999999999999999998 999998876


Q ss_pred             hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          231 VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       231 ~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ....+..+...                          ...   ......+++.+.+||.+||..||.+|||++|++++
T Consensus       253 ~~~~~~~~~~~--------------------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          253 VDSKFYKMIKE--------------------------GFR---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SSHHHHHHHHH--------------------------TCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chhHHHHHhcc--------------------------CCC---CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            54333222110                          000   01124578899999999999999999999999874


No 187
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=6.3e-43  Score=373.96  Aligned_cols=259  Identities=25%  Similarity=0.381  Sum_probs=199.8

Q ss_pred             cccCCCCCCeEEEeEeeecCceEEEEEEEC---CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEec
Q 007177           11 FSEYGDASRYKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIML   87 (614)
Q Consensus        11 ~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~---~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~   87 (614)
                      |...-..++|++.+.||+|+||.||+|.++   .++..||||+++.. ........+.+|+.+|+.++||||+++++++ 
T Consensus        38 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-  115 (373)
T 2qol_A           38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-  115 (373)
T ss_dssp             TSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             HHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence            344455678999999999999999999876   46778999999753 2445567899999999999999999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeec
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                          .+...+|+|||||+ ++|.+++...+ .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+||
T Consensus       116 ----~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  191 (373)
T 2qol_A          116 ----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF  191 (373)
T ss_dssp             ----CSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             ----eeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcC
Confidence                34567899999997 69999998754 6999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCC
Q 007177          166 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGT  244 (614)
Q Consensus       166 Gla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~  244 (614)
                      |+++................++..|+|||++.+  ..++.++|||||||++|||++ |..||.+.+..+.+..+....  
T Consensus       192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~--  267 (373)
T 2qol_A          192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY--  267 (373)
T ss_dssp             ----------------------CTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE--
T ss_pred             ccccccccCCccceeccCCCcCCCccChhhhcc--CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--
Confidence            999876443222211223345778999999986  689999999999999999998 999998877654443332110  


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                             .     ......++..+.+||.+||+.||.+||+++++++
T Consensus       268 -----------------------~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          268 -----------------------R-----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             -----------------------E-----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------------C-----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                                   0     0112356789999999999999999999999976


No 188
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-42  Score=364.19  Aligned_cols=256  Identities=25%  Similarity=0.391  Sum_probs=206.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~   89 (614)
                      ..++|++.+.||+|+||.||+|.+.     .++..||||++.... .......+.+|+.+|+.+ +||||+++++++.  
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~--  119 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACT--  119 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe--
Confidence            3478999999999999999999973     466789999997532 234456788999999999 8999999999984  


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeEee
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKAND-----------------------DLTREHYQFFLYQLLRALKYIHTANVYHR  145 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~~-----------------------~lse~~~~~i~~QIl~aL~yLHs~gIvHr  145 (614)
                         +.+.+|+|||||+ ++|.+++....                       .+++..+..|+.||+.||.|||+.||+||
T Consensus       120 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  196 (344)
T 1rjb_A          120 ---LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  196 (344)
T ss_dssp             ---SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             ---eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence               4456899999998 59999998653                       37999999999999999999999999999


Q ss_pred             cCCCCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCC
Q 007177          146 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKP  224 (614)
Q Consensus       146 DLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~  224 (614)
                      ||||+|||++.++.+||+|||++......... .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~  273 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVN  273 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccc-eeccCccCccCccCHHHhcc--CCCChhHhHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999866443322 12234567889999999876  679999999999999999998 999


Q ss_pred             CCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 007177          225 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE  304 (614)
Q Consensus       225 pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e  304 (614)
                      ||.+.+....+..+..                          ....   ......+++.+.+||.+||..||.+|||+.+
T Consensus       274 p~~~~~~~~~~~~~~~--------------------------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  324 (344)
T 1rjb_A          274 PYPGIPVDANFYKLIQ--------------------------NGFK---MDQPFYATEEIYIIMQSCWAFDSRKRPSFPN  324 (344)
T ss_dssp             SSTTCCCSHHHHHHHH--------------------------TTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CcccCCcHHHHHHHHh--------------------------cCCC---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            9988764433322211                          0000   1112356889999999999999999999999


Q ss_pred             HHcCc
Q 007177          305 ALADP  309 (614)
Q Consensus       305 iL~hp  309 (614)
                      +++|.
T Consensus       325 l~~~l  329 (344)
T 1rjb_A          325 LTSFL  329 (344)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864


No 189
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=8.1e-43  Score=357.67  Aligned_cols=257  Identities=19%  Similarity=0.239  Sum_probs=203.3

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++....    ....+.+|+.+++.++|++++..+..+.    .+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~   77 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEG   77 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEE----EET
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeec----CCC
Confidence            44578999999999999999999999999999999876432    2234778999999999988887777663    344


Q ss_pred             CcEEEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCcccc
Q 007177           95 KDIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARV  170 (614)
Q Consensus        95 ~~~ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~  170 (614)
                      ...|+||||+.++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+++.
T Consensus        78 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~  157 (296)
T 4hgt_A           78 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence            67899999998899999985 4579999999999999999999999999999999999999   7889999999999987


Q ss_pred             ccCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhH---HHHHHHhhhC
Q 007177          171 AFNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH---QLDLMTDLLG  243 (614)
Q Consensus       171 ~~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~---~l~~i~~~~g  243 (614)
                      ........    .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+...   .+..+..   
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---  232 (296)
T 4hgt_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE---  232 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH---
T ss_pred             ccCcccCccCCCCcccccCCCccccchHHhcC--CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc---
Confidence            65432211    11235689999999999987  679999999999999999999999998754321   1111110   


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                             .....+.......+++.+.+||.+||+.||.+|||++++++
T Consensus       233 -----------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          233 -----------------------KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----------------------HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----------------------ccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                                   00001112223567889999999999999999999999987


No 190
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.4e-43  Score=366.32  Aligned_cols=261  Identities=20%  Similarity=0.317  Sum_probs=207.6

Q ss_pred             ccccccCCCCCCeEEEeEeeecCceEEEEEEECCCCcE----EEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceee
Q 007177            8 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK----VAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIK   83 (614)
Q Consensus         8 ~~~~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~----vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~   83 (614)
                      |+.+...-..++|++++.||+|+||.||+|.+..+++.    ||+|.+.... .......+.+|+.+++.++||||++++
T Consensus         3 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~   81 (325)
T 3kex_A            3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLL   81 (325)
T ss_dssp             -CCCCCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEE
T ss_pred             hHHHHhhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEE
Confidence            34444555667899999999999999999999988876    7777765321 112234567899999999999999999


Q ss_pred             eEecCCCCCCCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEE
Q 007177           84 HIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLK  161 (614)
Q Consensus        84 ~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vK  161 (614)
                      +++.      ....|+|||||. ++|.+++... +.+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+|
T Consensus        82 ~~~~------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~k  155 (325)
T 3kex_A           82 GLCP------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQ  155 (325)
T ss_dssp             EEEC------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEE
T ss_pred             EEEc------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEE
Confidence            9873      345899999998 6999999774 5799999999999999999999999999999999999999999999


Q ss_pred             EeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 007177          162 ICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTD  240 (614)
Q Consensus       162 L~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~  240 (614)
                      |+|||+++........ .......+|..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+..
T Consensus       156 l~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  232 (325)
T 3kex_A          156 VADFGVADLLPPDDKQ-LLYSEAKTPIKWMALESIHF--GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK  232 (325)
T ss_dssp             ECSCSGGGGSCCCTTC-CC-----CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT
T ss_pred             ECCCCcccccCccccc-ccccCCCCcccccChHHhcc--CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            9999999876433222 22345578889999999976  679999999999999999999 9999988765444333321


Q ss_pred             hhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          241 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       241 ~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                                 ....   .....+++.+.+||.+||..||.+|||+.++++|
T Consensus       233 ---------------------------~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          233 ---------------------------GERL---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ---------------------------TCBC---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ---------------------------CCCC---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                       0011   1112356788999999999999999999999886


No 191
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=2.2e-42  Score=349.55  Aligned_cols=250  Identities=14%  Similarity=0.196  Sum_probs=207.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+.  +..||||++............+.+|+.+|+.++||||+++++++...   +..
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~   82 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAP   82 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSS
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCC
Confidence            4568999999999999999999874  88999999987655666778899999999999999999999998543   236


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC--eEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           96 DIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTAN--VYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      .+|+|||||+ ++|.+++....  .+++..+..|+.||+.||.|||+.|  |+||||||+|||++.++.+||+|||++..
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            7899999998 59999998765  4899999999999999999999999  99999999999999999999999988754


Q ss_pred             ccCCCCCccccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ...        ....+|+.|+|||++.+. ...++.++|||||||++|+|++|..||.+.+..+....+...        
T Consensus       163 ~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--------  226 (271)
T 3kmu_A          163 FQS--------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE--------  226 (271)
T ss_dssp             TSC--------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS--------
T ss_pred             ecc--------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc--------
Confidence            221        234789999999998752 123344899999999999999999999887765544333211        


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        ...   ......+++.+.+||.+||+.||.+|||++++++
T Consensus       227 ------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          227 ------------------GLR---PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             ------------------CCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                              000   1123467899999999999999999999999986


No 192
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=3e-42  Score=353.80  Aligned_cols=256  Identities=20%  Similarity=0.246  Sum_probs=206.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++......    ..+.+|+.+++.++|++++..+..+.    .+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~   78 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCG----AEGD   78 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEE----EETT
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCcccccc----CCCC
Confidence            457899999999999999999999999999999998653222    35789999999999988777776653    3446


Q ss_pred             cEEEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCccccc
Q 007177           96 DIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~~  171 (614)
                      ..|+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++..
T Consensus        79 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           79 YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             ceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            7899999998899999974 4579999999999999999999999999999999999999   47889999999999875


Q ss_pred             cCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChh---HHHHHHHhhhCC
Q 007177          172 FNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV---HQLDLMTDLLGT  244 (614)
Q Consensus       172 ~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~---~~l~~i~~~~g~  244 (614)
                      .......    .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..   ..+..+...   
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---  233 (296)
T 3uzp_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK---  233 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH---
T ss_pred             cccccccccccccccccccccccCChhhhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc---
Confidence            5433211    11245689999999999987  67999999999999999999999999874421   122222110   


Q ss_pred             CchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          245 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       245 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                             ....+.......+++.+.+||.+||+.||.+|||++++++
T Consensus       234 -----------------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          234 -----------------------KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----------------------HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----------------------ccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                                   0001111223567899999999999999999999999976


No 193
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=3e-42  Score=355.23  Aligned_cols=273  Identities=23%  Similarity=0.365  Sum_probs=210.8

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEE----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAI----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP   89 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~   89 (614)
                      .-...+|++++.||+|+||.||+|.    +..+++.||||++.... .......+.+|+.+|+.++||||+++++++...
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED   95 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            3445679999999999999999998    57789999999997532 223456788999999999999999999998542


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                         +...+|+||||++ ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus        96 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A           96 ---GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             -----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             ---CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccc
Confidence               2356899999998 599999954 56799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      +.................+|..|+|||++.+  ..++.++|||||||++|+|++|..||...     ...+....+....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~  245 (302)
T 4e5w_A          173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQ--SKFYIASDVWSFGVTLHELLTYCDSDSSP-----MALFLKMIGPTHG  245 (302)
T ss_dssp             CEECCTTCCEEECCCCTTCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSH-----HHHHHHHHCSCCG
T ss_pred             cccccCCCcceeccCCCCCCccccCCeeecC--CCCCcchhHHHHHHHHHHHHHccCCCcch-----hhHHhhccCCccc
Confidence            9876544332233345678899999999876  57889999999999999999999886432     1222222222211


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ..       ........+......   ...+.+++.+.+||.+||+.||.+|||++++++
T Consensus       246 ~~-------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          246 QM-------TVTRLVNTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             GG-------HHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             cc-------CHHHHHHHHhccCCC---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            11       111222222222222   223568899999999999999999999999976


No 194
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.2e-42  Score=364.16  Aligned_cols=253  Identities=22%  Similarity=0.367  Sum_probs=199.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEE----EEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKV----AIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~v----AIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ..++|++++.||+|+||.||+|.+..+++.+    |+|.+... ........+.+|+.+|+.++||||+++++++..   
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---   88 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---   88 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---
Confidence            4568999999999999999999998888754    77776532 222345678899999999999999999999853   


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                         ...++|+|++. ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        89 ---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A           89 ---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             ---SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             ---CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCccee
Confidence               23789999998 699999977 4579999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ........ .......+|..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+..        
T Consensus       166 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~--------  234 (327)
T 3poz_A          166 LLGAEEKE-YHAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK--------  234 (327)
T ss_dssp             HHTTTCC--------CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--------
T ss_pred             EccCCccc-ccccCCCccccccChHHhcc--CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc--------
Confidence            76433321 12234467889999999887  689999999999999999999 9999988765444333211        


Q ss_pred             hhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          249 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                         ....   ...+..+..+.+||.+||+.||.+|||+.+++++
T Consensus       235 -------------------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          235 -------------------GERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             -------------------TCCC---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             -------------------CCCC---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                               0001   1224567899999999999999999999999875


No 195
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.8e-42  Score=360.48  Aligned_cols=254  Identities=19%  Similarity=0.357  Sum_probs=210.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-----CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ..++|++.+.||+|+||.||+|.++     .+++.||||++... ........+.+|+.+|+.++||||+++++++    
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~----   97 (322)
T 1p4o_A           23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVV----   97 (322)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE----
T ss_pred             hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE----
Confidence            3478999999999999999999876     46788999999753 3345566788999999999999999999998    


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKAN----------DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK  159 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~----------~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~  159 (614)
                       .+....|+|||||+ ++|.+++...          ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        98 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~  176 (322)
T 1p4o_A           98 -SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  176 (322)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             -ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence             34456899999998 5999998652          35799999999999999999999999999999999999999999


Q ss_pred             EEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 007177          160 LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM  238 (614)
Q Consensus       160 vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i  238 (614)
                      +||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+
T Consensus       177 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  253 (322)
T 1p4o_A          177 VKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV  253 (322)
T ss_dssp             EEECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred             EEECcCcccccccccccc-ccccCCCCCCCccChhhhcc--CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence            999999999865432211 11233467889999999876  678999999999999999999 89999887765444333


Q ss_pred             HhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          239 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       239 ~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ..                           ..   .......+++.+.+||.+||..||.+|||+.|+++|
T Consensus       254 ~~---------------------------~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          254 ME---------------------------GG---LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HT---------------------------TC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             Hc---------------------------CC---cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            21                           00   111234678899999999999999999999999986


No 196
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=9.5e-43  Score=372.69  Aligned_cols=253  Identities=23%  Similarity=0.383  Sum_probs=207.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.++.+++.||||+++.. ........+.+|+.+|+.++||||+++++++     .+..
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~  185 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQ  185 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSS
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCC
Confidence            356899999999999999999999999999999998753 2334456788999999999999999999998     3445


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+|||||+ ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            6899999998 69999997653 699999999999999999999999999999999999999999999999999986432


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..... ......++..|+|||++.+  ..++.++|||||||++|||++ |..||.+.+..+....+..            
T Consensus       266 ~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~------------  330 (377)
T 3cbl_A          266 GVYAA-SGGLRQVPVKWTAPEALNY--GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK------------  330 (377)
T ss_dssp             SEEEC-CSSCCEEEGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT------------
T ss_pred             Cceee-cCCCCCCCcCcCCHhHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------------
Confidence            21110 0111235678999999876  578999999999999999998 9999988775444333211            


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                     ....   .....+++.+.+||.+||+.||.+|||++++++
T Consensus       331 ---------------~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          331 ---------------GGRL---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             ---------------TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                           1111   112346789999999999999999999999976


No 197
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=8.7e-43  Score=364.53  Aligned_cols=273  Identities=22%  Similarity=0.333  Sum_probs=214.4

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEE----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAI----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP   89 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~   89 (614)
                      .-..++|++++.||+|+||.||+|.    +..+++.||||++...  .......+.+|+.+|+.++||||+++++++.. 
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-   95 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYG-   95 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEec-
Confidence            3445689999999999999999998    5678999999999753  44556778999999999999999999998753 


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                        .+...+|+|||||+ ++|.+++.. ...+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus        96 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  173 (327)
T 3lxl_A           96 --PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL  173 (327)
T ss_dssp             --SSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred             --CCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccc
Confidence              24467999999997 699999976 45699999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      ++................+|..|+|||++.+  ..++.++|||||||++|+|++|..||........     ....... 
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-----~~~~~~~-  245 (327)
T 3lxl_A          174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSD--NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL-----RMMGCER-  245 (327)
T ss_dssp             CEECCTTCSEEECSSCCCSCGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-----HHCC----
T ss_pred             ceecccCCccceeeccCCccccccCHHHhcc--CCCChHHhHHHHHHHHHHHHhCCCCCccccchhh-----hhccccc-
Confidence            9876544333333345678999999999876  5789999999999999999999999965432111     0000000 


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                            ...........+......   ...+.+++.+.+||.+||+.||.+|||+++++++
T Consensus       246 ------~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          246 ------DVPALSRLLELLEEGQRL---PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             -------CCHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------ccccHHHHHHHhhcccCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                  000111122222222211   2235678999999999999999999999999765


No 198
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9.7e-43  Score=356.61  Aligned_cols=246  Identities=17%  Similarity=0.279  Sum_probs=201.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCC-------cEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTG-------EKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLP   88 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg-------~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~   88 (614)
                      ..++|++.+.||+|+||.||+|.+..++       ..||+|++...  .......+.+|+.+|+.++||||+++++++. 
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-   82 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCV-   82 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-
Confidence            3568999999999999999999998877       47999998753  2344567889999999999999999999984 


Q ss_pred             CCCCCCCcEEEEEecCC-CcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc-------
Q 007177           89 PSRRDFKDIYVVFELME-SDLHQVIKANDD-LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK-------  159 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~-lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~-------  159 (614)
                          +....|+|||||+ ++|.+++..... +++..+..|+.||+.||.|||+.||+||||||+|||++.++.       
T Consensus        83 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           83 ----CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             ----CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             ----eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc
Confidence                4456799999998 699999987654 999999999999999999999999999999999999998887       


Q ss_pred             -EEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhC-CCCCCCCChhHHHHH
Q 007177          160 -LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDL  237 (614)
Q Consensus       160 -vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG-~~pF~g~~~~~~l~~  237 (614)
                       +||+|||++......       ....+|+.|+|||++.+. ..++.++|||||||++|+|++| .+||...+.......
T Consensus       159 ~~kl~Dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~  230 (289)
T 4fvq_A          159 FIKLSDPGISITVLPK-------DILQERIPWVPPECIENP-KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF  230 (289)
T ss_dssp             EEEECCCCSCTTTSCH-------HHHHHTTTTSCHHHHHCG-GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             eeeeccCcccccccCc-------cccCCcCcccCHHHhCCC-CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH
Confidence             999999998654221       234588899999998752 4689999999999999999995 555555443322211


Q ss_pred             HHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          238 MTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       238 i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ..                           ..     .......++.+.+||.+||+.||.+|||++++++|
T Consensus       231 ~~---------------------------~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          231 YE---------------------------DR-----HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HH---------------------------TT-----CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hh---------------------------cc-----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            10                           00     01123456789999999999999999999999986


No 199
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.1e-42  Score=352.57  Aligned_cols=255  Identities=22%  Similarity=0.328  Sum_probs=209.3

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEEC--CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQE-VIGKGSYGVVCSAIDT--HTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~-~LG~G~~G~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||||+++.. ........+.+|+.+|+.++||||+++++++.      
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------   80 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------   80 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------
Confidence            45788877 9999999999999864  46788999999754 34456778999999999999999999999982      


Q ss_pred             CCcEEEEEecCCC-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           94 FKDIYVVFELMES-DLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        94 ~~~~ylV~E~~~g-~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ...+|+||||+++ +|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            2358999999995 999998653 46999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ..............+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+..          
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~----------  228 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----------  228 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT----------
T ss_pred             ccCcceeeccccccccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc----------
Confidence            433322222233457889999999876  578999999999999999998 9999988765444433311          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPY  310 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~  310 (614)
                                       ...   ....+.+++.+.+||.+||..||.+|||++++++|.+
T Consensus       229 -----------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          229 -----------------GKR---MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             -----------------TCC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             -----------------CCc---CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                             001   1123467899999999999999999999999998744


No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.7e-42  Score=357.49  Aligned_cols=256  Identities=25%  Similarity=0.414  Sum_probs=209.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEE-----CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAID-----THTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~   89 (614)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||++... ........+.+|+.+|+.+ +||||+++++++.. 
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-  102 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-  102 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC-
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec-
Confidence            457899999999999999999985     457789999999754 3344566789999999999 69999999999843 


Q ss_pred             CCCCCCcEEEEEecCC-CcHHHHHHhCCC----------------CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcE
Q 007177           90 SRRDFKDIYVVFELME-SDLHQVIKANDD----------------LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI  152 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~-g~L~~~i~~~~~----------------lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI  152 (614)
                         ....+|+|||||+ ++|.+++.....                +++..+..++.||+.||.|||+.||+||||||+||
T Consensus       103 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni  179 (316)
T 2xir_A          103 ---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  179 (316)
T ss_dssp             ---TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ---CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence               2345899999999 599999987654                89999999999999999999999999999999999


Q ss_pred             EECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCh
Q 007177          153 LANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV  231 (614)
Q Consensus       153 Li~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~  231 (614)
                      |++.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+.
T Consensus       180 l~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          180 LLSEKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             EECGGGCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             EECCCCCEEECCCccccccccCccc-eeccCCCcceeecCchhhcc--ccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            9999999999999999865433221 22234568899999999876  679999999999999999998 9999987664


Q ss_pred             hHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          232 VHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       232 ~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .+.+.....                          .....   .....+++.+.+||.+||..||.+|||++++++|
T Consensus       257 ~~~~~~~~~--------------------------~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          257 DEEFCRRLK--------------------------EGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             SHHHHHHHH--------------------------HTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHhc--------------------------cCccC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            333221111                          01111   1123578899999999999999999999999986


No 201
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=3.7e-42  Score=355.50  Aligned_cols=250  Identities=27%  Similarity=0.423  Sum_probs=195.4

Q ss_pred             cccccCCCCCCeEEE-eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHH-HhcCCCCcceeeeEe
Q 007177            9 EFFSEYGDASRYKIQ-EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLL-RLLRHPDIVEIKHIM   86 (614)
Q Consensus         9 ~~~~~~~~~~rY~i~-~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL-~~L~HpnIv~l~~v~   86 (614)
                      ..+......++|.+. +.||+|+||.||+|.++.+++.||||++..       ...+.+|+.++ +.++||||+++++++
T Consensus         8 ~~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~   80 (299)
T 3m2w_A            8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVY   80 (299)
T ss_dssp             CCCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ccCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhh
Confidence            344555566788887 789999999999999999999999999864       23466888888 666899999999988


Q ss_pred             cCCCCCCCCcEEEEEecCCC-cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC---CCcE
Q 007177           87 LPPSRRDFKDIYVVFELMES-DLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA---NCKL  160 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~---~~~v  160 (614)
                      .... .+...+|+|||||++ +|.+++....  .+++..++.|+.||+.||.|||+.||+||||||+|||++.   ++.+
T Consensus        81 ~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~  159 (299)
T 3m2w_A           81 ENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL  159 (299)
T ss_dssp             EEEE-TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCE
T ss_pred             hhhc-CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcE
Confidence            4311 235679999999985 9999998764  6999999999999999999999999999999999999998   7889


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD  240 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~  240 (614)
                      ||+|||++....                         +  ..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       160 kl~Dfg~a~~~~-------------------------~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  212 (299)
T 3m2w_A          160 KLTDFGFAKETT-------------------------G--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT  212 (299)
T ss_dssp             EECCCTTCEECT-------------------------T--CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC
T ss_pred             EEeccccccccc-------------------------c--ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH
Confidence            999999986421                         1  3577899999999999999999999977653221100000


Q ss_pred             hhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCCc
Q 007177          241 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK  316 (614)
Q Consensus       241 ~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~~  316 (614)
                                             .+...........+..+++.+.+||.+||+.||.+|||++|+|+||||++...
T Consensus       213 -----------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          213 -----------------------RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             -----------------------SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             -----------------------HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence                                   00000000011122567899999999999999999999999999999987544


No 202
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=5.2e-42  Score=347.90  Aligned_cols=249  Identities=27%  Similarity=0.430  Sum_probs=194.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC--hHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH--ISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~--~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++.+.||+|+||.||+|.+.  +..||||++......  ......+.+|+.+++.++||||+++++++     .+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~   77 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LK   77 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CC
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ec
Confidence            4578999999999999999999874  889999998753222  12346788999999999999999999998     44


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeecCCCCcEEECC--------CCcEE
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN---VYHRDLKPKNILANA--------NCKLK  161 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~g---IvHrDLKP~NILi~~--------~~~vK  161 (614)
                      ....|+||||++ ++|.+++. ...+++..++.++.||+.||.|||+.|   |+||||||+|||++.        ++.+|
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             CCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            566899999998 58888775 557999999999999999999999999   999999999999986        67899


Q ss_pred             EeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhh
Q 007177          162 ICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL  241 (614)
Q Consensus       162 L~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~  241 (614)
                      |+|||+++.......     ....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+.. 
T Consensus       157 l~Dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-  228 (271)
T 3dtc_A          157 ITDFGLAREWHRTTK-----MSAAGAYAWMAPEVIRA--SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-  228 (271)
T ss_dssp             ECCCCC------------------CCGGGSCHHHHHH--CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-
T ss_pred             EccCCcccccccccc-----cCCCCccceeCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-
Confidence            999999976543222     23579999999999877  6789999999999999999999999988775444332211 


Q ss_pred             hCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          242 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       242 ~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                               ....   ......+++.+.+||.+||..||.+|||++|++++
T Consensus       229 -------------------------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          229 -------------------------NKLA---LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             -------------------------SCCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------------------CCCC---CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                                     0101   11224578899999999999999999999999875


No 203
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.2e-42  Score=347.43  Aligned_cols=250  Identities=25%  Similarity=0.385  Sum_probs=207.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      +.++|++.+.||+|+||.||+|.+. ++..||+|++......   ...+.+|+.+++.++||||+++++++.     +..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   76 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQA   76 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSS
T ss_pred             chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCC
Confidence            4578999999999999999999986 6788999999864332   356889999999999999999999983     445


Q ss_pred             cEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           96 DIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      .+|+||||++ ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           77 PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            6899999998 5999999775 5689999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISR  252 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~  252 (614)
                      ..  ........++..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+....+...           
T Consensus       157 ~~--~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----------  221 (267)
T 3t9t_A          157 DQ--YTSSTGTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----------  221 (267)
T ss_dssp             HH--HHSTTSTTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----------
T ss_pred             cc--ccccccccccccccChhhhcC--CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----------
Confidence            11  111233467888999999976  578999999999999999999 89999887765544433210           


Q ss_pred             hhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          253 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                      ...   ......++.+.+||.+||..||.+|||+++++++
T Consensus       222 ----------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          222 ----------------FRL---YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             ----------------CCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CcC---CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                            000   1123467899999999999999999999999874


No 204
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=7.1e-42  Score=358.95  Aligned_cols=254  Identities=25%  Similarity=0.408  Sum_probs=208.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEEC-------CCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEec
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDT-------HTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIML   87 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~-------~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~   87 (614)
                      ..++|++.+.||+|+||.||+|.+.       .++..||||++... ........+.+|+.+|+.+ +||||+++++++ 
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-  110 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-  110 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE-
Confidence            3478999999999999999999986       46678999999754 3445667889999999999 899999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCC
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKAND----------------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK  150 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~----------------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~  150 (614)
                          .+.+.+|+||||++ ++|.+++....                .+++..++.++.||+.||.|||+.||+||||||+
T Consensus       111 ----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  186 (334)
T 2pvf_A          111 ----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  186 (334)
T ss_dssp             ----CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             ----ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence                34567899999998 59999998654                3899999999999999999999999999999999


Q ss_pred             cEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 007177          151 NILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGK  229 (614)
Q Consensus       151 NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~  229 (614)
                      |||++.++.+||+|||+++....... ........+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.
T Consensus       187 NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~  263 (334)
T 2pvf_A          187 NVLVTENNVMKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  263 (334)
T ss_dssp             GEEECTTCCEEECCCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             eEEEcCCCCEEEcccccccccccccc-ccccCCCCcccceeChHHhcC--CCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence            99999999999999999986543321 111233467889999999876  578999999999999999999 99999887


Q ss_pred             ChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          230 NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       230 ~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      +..+....+...                           ..   ......+++.+.+||.+||..||.+|||+++++++
T Consensus       264 ~~~~~~~~~~~~---------------------------~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          264 PVEELFKLLKEG---------------------------HR---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CHHHHHHHHHHT---------------------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHhcC---------------------------CC---CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            755444333210                           00   11224678899999999999999999999999875


No 205
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.4e-42  Score=361.17  Aligned_cols=258  Identities=21%  Similarity=0.317  Sum_probs=206.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEE-----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAI-----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~-----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      ..++|++++.||+|+||.||+|.     +..++..||||++... ........+.+|+.+|+.++||||+++++++.   
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---  103 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSL---  103 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc---
Confidence            45799999999999999999998     5678889999999743 34456677889999999999999999999984   


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC---Cc
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKAND-------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN---CK  159 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~~~-------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~---~~  159 (614)
                        +....|+|||||+ ++|.+++....       .+++..++.++.||+.||.|||+.||+||||||+|||++.+   ..
T Consensus       104 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~  181 (327)
T 2yfx_A          104 --QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  181 (327)
T ss_dssp             --SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             --CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence              4456799999997 69999998753       48999999999999999999999999999999999999844   46


Q ss_pred             EEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 007177          160 LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM  238 (614)
Q Consensus       160 vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i  238 (614)
                      +||+|||+++......... ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+.+..+
T Consensus       182 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  258 (327)
T 2yfx_A          182 AKIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  258 (327)
T ss_dssp             EEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             EEECccccccccccccccc-cCCCcCCCcceeCHhHhcC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH
Confidence            9999999997654322211 1234568899999999876  678999999999999999998 99999887765444333


Q ss_pred             HhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          239 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       239 ~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                      ...                           ..   ......+++.+.+||.+||..||.+|||++++++|.|+-
T Consensus       259 ~~~---------------------------~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          259 TSG---------------------------GR---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HTT---------------------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcC---------------------------CC---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            210                           00   112246788999999999999999999999999998864


No 206
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.7e-42  Score=351.98  Aligned_cols=259  Identities=23%  Similarity=0.373  Sum_probs=197.4

Q ss_pred             CCCCCCCccccccC---CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCC
Q 007177            1 MLQNSPEMEFFSEY---GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHP   77 (614)
Q Consensus         1 m~~~~~~~~~~~~~---~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hp   77 (614)
                      ||.+.+..+.+...   -..++|++.+.||+|+||.||+|.+  +|+.||||+++..    .....+.+|+.+++.++||
T Consensus         1 mg~s~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~   74 (278)
T 1byg_A            1 MGGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHS   74 (278)
T ss_dssp             --------------CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC----C--HHHHHTHHHHTTCCCT
T ss_pred             CCCCccchhhhhhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch----hHHHHHHHHHHHHHhCCCC
Confidence            78876666655442   4458999999999999999999976  4889999998753    2456788999999999999


Q ss_pred             CcceeeeEecCCCCCCCCcEEEEEecCCC-cHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE
Q 007177           78 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA  154 (614)
Q Consensus        78 nIv~l~~v~~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~~~--lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi  154 (614)
                      ||+++++++..    ....+|+||||+++ +|.+++.....  +++..+..++.||+.||.|||+.||+||||||+|||+
T Consensus        75 ~iv~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~  150 (278)
T 1byg_A           75 NLVQLLGVIVE----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV  150 (278)
T ss_dssp             TBCCEEEEECC----C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CEeeEEEEEEc----CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE
Confidence            99999998743    33468999999985 99999976543  8999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhH
Q 007177          155 NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVH  233 (614)
Q Consensus       155 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~  233 (614)
                      +.++.+||+|||++.......      ....+++.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+
T Consensus       151 ~~~~~~~l~Dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  222 (278)
T 1byg_A          151 SEDNVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  222 (278)
T ss_dssp             CTTSCEEECCCCC------------------CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             eCCCcEEEeeccccccccccc------cCCCccccccCHHHhCC--CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999997643321      22357889999999876  678999999999999999998 999998776544


Q ss_pred             HHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          234 QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       234 ~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ....+..                           ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       223 ~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          223 VVPRVEK---------------------------GYK---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHTT---------------------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhc---------------------------CCC---CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            4333211                           100   1123467899999999999999999999999976


No 207
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=5.1e-42  Score=350.49  Aligned_cols=252  Identities=23%  Similarity=0.376  Sum_probs=204.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECC---CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~---tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ..++|++.+.||+|+||.||+|.+..   ++..||+|.+... ........+.+|+.+|+.++||||+++++++..    
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----   84 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS----
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC----
Confidence            34689999999999999999998654   3346999998754 244566788999999999999999999999732    


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                        ...|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus        85 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           85 --EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             --SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             --CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence              34699999999 5999999764 4699999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      .......  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||...+..+....+...        
T Consensus       163 ~~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~--------  230 (281)
T 3cc6_A          163 IEDEDYY--KASVTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG--------  230 (281)
T ss_dssp             C-----------CCCCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT--------
T ss_pred             ccccccc--ccccCCCCcceeCchhhcc--CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC--------
Confidence            5432211  1233457889999999876  678999999999999999998 99999876655444333211        


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                         ...   .....+++.+.+||.+||..||.+|||+.|++++
T Consensus       231 -------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          231 -------------------DRL---PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             -------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------------CCC---CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                               001   1123578899999999999999999999999875


No 208
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=3.9e-42  Score=365.68  Aligned_cols=269  Identities=16%  Similarity=0.159  Sum_probs=203.0

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCC-----CcEEEEEEecCccCChHH---------HHHHHHHHHHHHhcCCCCcce
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHT-----GEKVAIKKIHDIFEHISD---------AARILREIKLLRLLRHPDIVE   81 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~t-----g~~vAIK~i~~~~~~~~~---------~~~i~~Ei~iL~~L~HpnIv~   81 (614)
                      ..++|++++.||+|+||.||+|.+..+     ++.||||++.........         ...+..|+..++.++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            345899999999999999999998765     578999998643211110         012345666777888999999


Q ss_pred             eeeEecCCCCCCCCcEEEEEecCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEEC--CCC
Q 007177           82 IKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN--ANC  158 (614)
Q Consensus        82 l~~v~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~--~~~  158 (614)
                      +++++.... .+...+|||||||+++|.+++... ..+++..++.|+.||+.||.|||+.||+||||||+|||++  .++
T Consensus       113 ~~~~~~~~~-~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          113 YWGSGLHDK-NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEEEE-TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred             EEeeeeecc-CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence            999985432 223568999999977999999876 6799999999999999999999999999999999999998  889


Q ss_pred             cEEEeecCccccccCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHH
Q 007177          159 KLKICDFGLARVAFNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ  234 (614)
Q Consensus       159 ~vKL~DFGla~~~~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~  234 (614)
                      .+||+|||+++.........    ......+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+......
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~  269 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG--VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK  269 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence            99999999997654322111    11234569999999999987  5799999999999999999999999986443322


Q ss_pred             HHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          235 LDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       235 l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      .........           .......+....         ...++++.+.+||..||..||.+||+++++++
T Consensus       270 ~~~~~~~~~-----------~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          270 YVRDSKIRY-----------RENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHH-----------HHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHh-----------hhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            221111000           001111111100         01467889999999999999999999999976


No 209
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=9.5e-42  Score=357.01  Aligned_cols=255  Identities=24%  Similarity=0.373  Sum_probs=208.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCc-----EEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGE-----KVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPP   89 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~-----~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~   89 (614)
                      ..++|++.+.||+|+||.||+|.+..++.     .||+|++... ........+.+|+.+|+.+ +||||+++++++   
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~---  119 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMSHLGQHENIVNLLGAC---  119 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc-cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE---
Confidence            45789999999999999999999987665     7999999754 3345567789999999999 899999999998   


Q ss_pred             CCCCCCcEEEEEecCCC-cHHHHHHh--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE
Q 007177           90 SRRDFKDIYVVFELMES-DLHQVIKA--------------NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA  154 (614)
Q Consensus        90 ~~~~~~~~ylV~E~~~g-~L~~~i~~--------------~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi  154 (614)
                        .+...+|+|||||++ +|.+++..              ...+++..+..++.||+.||.|||+.||+||||||+|||+
T Consensus       120 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          120 --THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             --CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE
T ss_pred             --ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE
Confidence              344668999999984 99999864              3458999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhH
Q 007177          155 NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVH  233 (614)
Q Consensus       155 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~  233 (614)
                      +.++.+||+|||+++........ .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.....
T Consensus       198 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          198 TNGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             EGGGEEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             CCCCeEEECccccccccccccce-eecCCCCCCccccCHHHhcc--CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            99999999999999865443321 12234467889999999876  679999999999999999998 999998876443


Q ss_pred             HHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          234 QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       234 ~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .+..+...                          ....   ......++.+.+||.+||+.||.+|||+++++++
T Consensus       275 ~~~~~~~~--------------------------~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          275 KFYKLVKD--------------------------GYQM---AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHHHH--------------------------TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhc--------------------------CCCC---CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            33222110                          0000   1123467899999999999999999999999873


No 210
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.5e-42  Score=366.19  Aligned_cols=266  Identities=15%  Similarity=0.160  Sum_probs=201.8

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECC---CCcEEEEEEecCccCChHH---------HHHHHHHHHHHHhcCCCCcceee
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKIHDIFEHISD---------AARILREIKLLRLLRHPDIVEIK   83 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~---tg~~vAIK~i~~~~~~~~~---------~~~i~~Ei~iL~~L~HpnIv~l~   83 (614)
                      ..++|++++.||+|+||.||+|.+..   ++..||||++.........         ...+.+|+.+++.++||||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            45789999999999999999999987   7889999998753211111         12356788999999999999999


Q ss_pred             eEecCCCCCCCCcEEEEEecCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCC--cEE
Q 007177           84 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANC--KLK  161 (614)
Q Consensus        84 ~v~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~--~vK  161 (614)
                      +++.... .+...+|+|||||.++|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++  .+|
T Consensus       115 ~~~~~~~-~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          115 GSGLTEF-KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEEEES-SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEE
T ss_pred             ccccccc-CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEE
Confidence            9985422 2356799999999779999998877899999999999999999999999999999999999998887  999


Q ss_pred             EeecCccccccCCCC----CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCh--hHHH
Q 007177          162 ICDFGLARVAFNDTP----TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQL  235 (614)
Q Consensus       162 L~DFGla~~~~~~~~----~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~--~~~l  235 (614)
                      |+|||+++.......    .........||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+...  ....
T Consensus       194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG--VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEeCCCceecccccccccchhccccccCCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            999999986543211    1112245689999999999987  5799999999999999999999999965321  1111


Q ss_pred             HHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCC--CCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          236 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKF--PNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       236 ~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .......                        ...+..+....  ..+++.+.+||.+||..||.+|||++++++.
T Consensus       272 ~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          272 TAKTNLL------------------------DELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHHH------------------------HTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHhhc------------------------ccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            1111100                        00011111111  2678899999999999999999999999873


No 211
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.1e-42  Score=375.90  Aligned_cols=262  Identities=26%  Similarity=0.359  Sum_probs=194.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      ...+.|.+.+.||+|+||+||.+ ...+|+.||||++...     ....+.+|+.+|+.+ +||||+++++++     .+
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~   80 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSE-----TT   80 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEE-----EC
T ss_pred             hhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEE-----ec
Confidence            34567888899999999999875 4568999999998642     234567899999876 899999999988     45


Q ss_pred             CCcEEEEEecCCCcHHHHHHhCCCC-------CHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC---------
Q 007177           94 FKDIYVVFELMESDLHQVIKANDDL-------TREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN---------  157 (614)
Q Consensus        94 ~~~~ylV~E~~~g~L~~~i~~~~~l-------se~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~---------  157 (614)
                      ...+|||||||+++|.+++......       ++..+..|+.||+.||.|||+.||+||||||+|||++.+         
T Consensus        81 ~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~  160 (434)
T 2rio_A           81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT  160 (434)
T ss_dssp             SSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTT
T ss_pred             CCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccccc
Confidence            5779999999999999999876433       233457799999999999999999999999999999754         


Q ss_pred             ----CcEEEeecCccccccCCCCC-ccccccccCCccccCccccccc-----CCCCCCcccchhHHHHHHHHHh-CCCCC
Q 007177          158 ----CKLKICDFGLARVAFNDTPT-TIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAEVLT-GKPLF  226 (614)
Q Consensus       158 ----~~vKL~DFGla~~~~~~~~~-~~~~~~~vgt~~Y~APEvl~~~-----~~~y~~~~DIWSLG~Il~eLlt-G~~pF  226 (614)
                          +.+||+|||+++........ .......+||+.|+|||++.+.     ...++.++|||||||++|||++ |..||
T Consensus       161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf  240 (434)
T 2rio_A          161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF  240 (434)
T ss_dssp             CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCC
Confidence                48999999999876443221 1122346899999999998641     1468999999999999999999 99999


Q ss_pred             CCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 007177          227 PGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEAL  306 (614)
Q Consensus       227 ~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL  306 (614)
                      .+.....  ..+...  ..                     ..... .......+++++.+||.+||+.||.+|||+.++|
T Consensus       241 ~~~~~~~--~~i~~~--~~---------------------~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil  294 (434)
T 2rio_A          241 GDKYSRE--SNIIRG--IF---------------------SLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL  294 (434)
T ss_dssp             CSTTTHH--HHHHHT--CC---------------------CCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCchhhH--HHHhcC--CC---------------------Ccccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence            7654322  111110  00                     00000 0000123457899999999999999999999999


Q ss_pred             cCccccc
Q 007177          307 ADPYFKG  313 (614)
Q Consensus       307 ~hp~f~~  313 (614)
                      +||||..
T Consensus       295 ~hp~f~~  301 (434)
T 2rio_A          295 RHPLFWP  301 (434)
T ss_dssp             TSGGGSC
T ss_pred             hCCccCC
Confidence            9999964


No 212
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.8e-42  Score=356.31  Aligned_cols=263  Identities=24%  Similarity=0.311  Sum_probs=197.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHh--cCCCCcceeeeEecCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRL--LRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~--L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ..++|++++.||+|+||.||+|.+  +++.||||++..     .....+.+|.+++..  ++||||+++++++.... ..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~   77 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFIASDMTSR-HS   77 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TT
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc-----ccchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CC
Confidence            467899999999999999999976  689999999864     234455677777776  78999999999864322 34


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeEeecCCCCcEEECCCCcEEEee
Q 007177           94 FKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIH--------TANVYHRDLKPKNILANANCKLKICD  164 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLH--------s~gIvHrDLKP~NILi~~~~~vKL~D  164 (614)
                      ...+|+|||||+ ++|.++++. ..+++..+..|+.||+.||.|||        +.||+||||||+|||++.++.+||+|
T Consensus        78 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  156 (301)
T 3q4u_A           78 STQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD  156 (301)
T ss_dssp             EEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             CceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEee
Confidence            466899999998 599999954 56999999999999999999999        99999999999999999999999999


Q ss_pred             cCccccccCCCCCc-cccccccCCccccCcccccccCC----CCCCcccchhHHHHHHHHHhC----------CCCCCCC
Q 007177          165 FGLARVAFNDTPTT-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEVLTG----------KPLFPGK  229 (614)
Q Consensus       165 FGla~~~~~~~~~~-~~~~~~vgt~~Y~APEvl~~~~~----~y~~~~DIWSLG~Il~eLltG----------~~pF~g~  229 (614)
                      ||+++......... ......+||+.|+|||++.+...    .++.++|||||||++|||++|          ..||.+.
T Consensus       157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence            99997654433221 11234589999999999876211    345789999999999999999          8888553


Q ss_pred             ChhH-HHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          230 NVVH-QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       230 ~~~~-~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ...+ ....+.                    ............+........++.+.+||.+||+.||.+|||++++++
T Consensus       237 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          237 VPNDPSFEDMR--------------------KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             SCSSCCHHHHH--------------------HHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCCcchhhhh--------------------HHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            2110 000000                    000000000011100011224567999999999999999999999986


No 213
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.8e-41  Score=351.34  Aligned_cols=256  Identities=26%  Similarity=0.425  Sum_probs=197.4

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCc-cCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      +...++|++.+.||+|+||.||+|.+..+|+.||||++... .........+.+|+.+|+.++||||+++++++.     
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----  102 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----  102 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----
Confidence            34557899999999999999999999999999999999753 234556678889999999999999999999984     


Q ss_pred             CCCcEEEEEecCCC-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           93 DFKDIYVVFELMES-DLHQVIKA----NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        93 ~~~~~ylV~E~~~g-~L~~~i~~----~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      +...+|+||||+++ +|.+++..    ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~  182 (310)
T 2wqm_A          103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL  182 (310)
T ss_dssp             ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred             cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence            44679999999995 99998864    45799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChh--HHHHHHHhhhCCC
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLMTDLLGTP  245 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~--~~l~~i~~~~g~p  245 (614)
                      ++.......   ......+|+.|+|||++.+  ..++.++|||||||++|+|++|..||.+....  .....+       
T Consensus       183 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------  250 (310)
T 2wqm_A          183 GRFFSSKTT---AAHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-------  250 (310)
T ss_dssp             -------------------CCSSCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH-------
T ss_pred             eeeecCCCc---cccccCCCeeEeChHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh-------
Confidence            976543221   1234578999999999887  67899999999999999999999999765321  111111       


Q ss_pred             chhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          246 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       246 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                          ......  ......+++.+.+||.+||..||.+|||+++++++
T Consensus       251 --------------------~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          251 --------------------EQCDYP--PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             --------------------HTTCSC--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------hcccCC--CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                                000000  01124578899999999999999999999999873


No 214
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.3e-42  Score=359.17  Aligned_cols=253  Identities=22%  Similarity=0.355  Sum_probs=200.7

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEE----EEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKV----AIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS   90 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~v----AIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~   90 (614)
                      -..++|++++.||+|+||.||+|.+..+++.+    |+|.+... ........+.+|+.+|+.++||||+++++++..  
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--   88 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--   88 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--
Confidence            44678999999999999999999999888765    66666532 223345678899999999999999999999853  


Q ss_pred             CCCCCcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           91 RRDFKDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                          ...++|+|++. ++|.+++.. ...+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++
T Consensus        89 ----~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a  164 (327)
T 3lzb_A           89 ----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             ----SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred             ----CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence                23789999998 699999876 457999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      +........ .......+|+.|+|||++.+  ..|+.++|||||||++|+|++ |..||.+.+..+....+..       
T Consensus       165 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-------  234 (327)
T 3lzb_A          165 KLLGAEEKE-YHAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-------  234 (327)
T ss_dssp             ----------------CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------
T ss_pred             eEccCcccc-ccccCCCccccccCHHHHcC--CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-------
Confidence            875433221 12234467889999999987  689999999999999999999 9999988776554433321       


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                          ...   ....+.+++.+.+||.+||..||.+|||++|+|+
T Consensus       235 --------------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          235 --------------------GER---LPQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             --------------------TCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------------CCC---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                                111   1122457889999999999999999999999987


No 215
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.6e-41  Score=349.49  Aligned_cols=255  Identities=23%  Similarity=0.368  Sum_probs=204.2

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCC---cEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTG---EKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg---~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      ...+|++.+.||+|+||.||+|.+..++   ..||+|.+... ........+.+|+.+|+.++||||+++++++.    .
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~   97 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----R   97 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----C
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----c
Confidence            3457999999999999999999875443   35899998753 34556678899999999999999999999864    3


Q ss_pred             CCCcEEEEEecCCC-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           93 DFKDIYVVFELMES-DLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        93 ~~~~~ylV~E~~~g-~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      +.+..|+|||||++ +|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A           98 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             CCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccc
Confidence            34568999999995 99999976 44689999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCC-CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          171 AFNDTP-TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       171 ~~~~~~-~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ...... .........+|+.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+..+....+...       
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-------  248 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-------  248 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-------
T ss_pred             ccccchhccccccCCCCCccccChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-------
Confidence            543221 1112344578889999999977  679999999999999999999 67888777655444333210       


Q ss_pred             hhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          249 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                          ...   .....+++.+.+||.+||..||.+|||++++++
T Consensus       249 --------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          249 --------------------RRL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             --------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------------CCC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                                000   112346789999999999999999999999987


No 216
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3e-42  Score=360.48  Aligned_cols=250  Identities=25%  Similarity=0.380  Sum_probs=203.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEE--EEEEecCccCChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKV--AIKKIHDIFEHISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~v--AIK~i~~~~~~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|++.+.||+|+||.||+|.++.++..+  |||.+... ........+.+|+.+|+.+ +||||+++++++     .+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~   97 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH   97 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceee-----ee
Confidence            478999999999999999999999888865  99988743 2334456788999999999 899999999998     44


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND----------------DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA  156 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~----------------~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~  156 (614)
                      .+.+|+||||++ ++|.+++....                .+++..++.|+.||+.||.|||+.||+||||||+|||++.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~  177 (327)
T 1fvr_A           98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  177 (327)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC
Confidence            567999999997 59999997654                6999999999999999999999999999999999999999


Q ss_pred             CCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHH
Q 007177          157 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQL  235 (614)
Q Consensus       157 ~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l  235 (614)
                      ++.+||+|||+++......    ......+++.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~  251 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY  251 (327)
T ss_dssp             GGCEEECCTTCEESSCEEC----CC----CCTTTCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCeEEEcccCcCccccccc----cccCCCCCccccChhhhcc--ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH
Confidence            9999999999997432211    1123457889999999876  578999999999999999998 99999887754443


Q ss_pred             HHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          236 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       236 ~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      ..+..                           ...   ......+++.+.+||.+||..||.+|||+++++++
T Consensus       252 ~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          252 EKLPQ---------------------------GYR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHGGG---------------------------TCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhc---------------------------CCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            32211                           100   11224578899999999999999999999999886


No 217
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.5e-43  Score=365.80  Aligned_cols=268  Identities=24%  Similarity=0.326  Sum_probs=206.9

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ....++|++.+.||+|+||.||+|.+ .+++.||||++...  .......+.+|+.+|+.++||||+++++++     .+
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~  106 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC-----DE  106 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEEC-----CC
T ss_pred             HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cC
Confidence            34568999999999999999999986 46899999998753  234567788999999999999999999998     44


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND----DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~----~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla  168 (614)
                      .+.+|+|||||+ ++|.+++....    .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS  186 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence            567899999998 59999886543    5899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      +........ .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+....+....+..        
T Consensus       187 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~--------  255 (321)
T 2qkw_B          187 KKGTELDQT-HLSTVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW--------  255 (321)
T ss_dssp             EECSSSSCC-CCBCCCEEETTTCCHHHHHH--CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHH--------
T ss_pred             ccccccccc-ccccccCCCccccCHHHhcC--CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHH--------
Confidence            864332221 12234568999999999876  5789999999999999999999999977543221111000        


Q ss_pred             hhhhhhchhHHHHHHh--hccc-CCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCc
Q 007177          249 TISRVRNDKARRYLTS--MRKK-QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP  309 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp  309 (614)
                               .......  +... .+.......+..+..+.+|+.+||+.||++|||+.|+|++.
T Consensus       256 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          256 ---------AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             ---------THHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ---------hhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                     0000000  0000 00000111123456789999999999999999999999864


No 218
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-41  Score=346.74  Aligned_cols=254  Identities=26%  Similarity=0.393  Sum_probs=203.7

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCc---EEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGE---KVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      -+|.+.+.||+|+||.||+|.+..++.   .||+|++... ........+.+|+.+|+.++||||+++++++...    .
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~   95 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----E   95 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----S
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----C
Confidence            357788999999999999998766554   7999998753 3445667889999999999999999999998432    2


Q ss_pred             CcEEEEEecCC-CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ...|+||||+. ++|.+++.. ...+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             CCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            33589999997 699999987 4568999999999999999999999999999999999999999999999999997643


Q ss_pred             CCCC-CccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          173 NDTP-TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       173 ~~~~-~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      .... .........+|+.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+..+....+...         
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~---------  244 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQT--YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG---------  244 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTT--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT---------
T ss_pred             CCcccccccCcCCCCCccccChhhhcc--CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC---------
Confidence            3211 1112234578899999999987  678999999999999999999 55666665544443332211         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                        ...   .....+++.+.+||.+||..||.+|||++++++.
T Consensus       245 ------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          245 ------------------RRL---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------CCC---CCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                              111   1123567899999999999999999999999873


No 219
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.7e-42  Score=356.54  Aligned_cols=262  Identities=24%  Similarity=0.390  Sum_probs=204.9

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++..  ........+.+|+.+++.++||||+++++++.... ....
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~  103 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKH  103 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCc
Confidence            35789999999999999999999999999999999864  34456778889999999999999999999885321 2345


Q ss_pred             cEEEEEecCCC-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           96 DIYVVFELMES-DLHQVIKA----NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~----~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      ..|+|||||.+ +|.+++..    ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            78999999995 99999875    46799999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCc------cccccccCCccccCccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          171 AFNDTPTT------IFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       171 ~~~~~~~~------~~~~~~vgt~~Y~APEvl~~~-~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ........      ..+....||+.|+|||++.+. ...++.++|||||||++|+|++|..||.......          
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------  253 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG----------  253 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT----------
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc----------
Confidence            43211110      112334679999999998652 1237889999999999999999999994311000          


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                  +.......   ....   ....+.+++.+.+||.+||+.||.+|||+++++++
T Consensus       254 ------------~~~~~~~~---~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          254 ------------DSVALAVQ---NQLS---IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             ------------SCHHHHHH---CC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------chhhHHhh---ccCC---CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                        00000000   1000   11234678999999999999999999999999986


No 220
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3e-42  Score=364.67  Aligned_cols=257  Identities=14%  Similarity=0.173  Sum_probs=201.8

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCC--------CcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceee-----
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHT--------GEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIK-----   83 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~t--------g~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~-----   83 (614)
                      .++|++.+.||+|+||.||+|.+..+        ++.||||++...       ..+.+|+.+|+.++||||++++     
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            57999999999999999999999884        889999998743       3577999999999999999843     


Q ss_pred             ----------eEecCCCCCCCCcEEEEEecCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCc
Q 007177           84 ----------HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKN  151 (614)
Q Consensus        84 ----------~v~~~~~~~~~~~~ylV~E~~~g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N  151 (614)
                                +++.    .+...+|+|||||.++|.+++...  ..+++..+..|+.||+.||.|||+.||+||||||+|
T Consensus       114 ~~~~~i~~~~~~~~----~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  189 (352)
T 2jii_A          114 TPLLAIPTCMGFGV----HQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN  189 (352)
T ss_dssp             CTTCSCCCCCEEEE----ETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG
T ss_pred             CCccCccchhhccc----cCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence                      3331    234678999999977999999886  789999999999999999999999999999999999


Q ss_pred             EEECCCC--cEEEeecCccccccCCCCC----ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCC
Q 007177          152 ILANANC--KLKICDFGLARVAFNDTPT----TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL  225 (614)
Q Consensus       152 ILi~~~~--~vKL~DFGla~~~~~~~~~----~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~p  225 (614)
                      ||++.++  .+||+|||+++........    ........||+.|+|||++.+  ..++.++|||||||++|+|++|+.|
T Consensus       190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG--CGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999998  8999999999765432211    111234589999999999987  5799999999999999999999999


Q ss_pred             CCCCC-hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 007177          226 FPGKN-VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE  304 (614)
Q Consensus       226 F~g~~-~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~e  304 (614)
                      |.+.. ....+.....                   .+...  ..........+..+++.+.+||.+||..||.+|||+++
T Consensus       268 f~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  326 (352)
T 2jii_A          268 WTNCLPNTEDIMKQKQ-------------------KFVDK--PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAM  326 (352)
T ss_dssp             TGGGTTCHHHHHHHHH-------------------HHHHS--CCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             cccCCcCHHHHHHHHH-------------------hccCC--hhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHH
Confidence            97754 2222111110                   00000  00000111123467899999999999999999999999


Q ss_pred             HHc
Q 007177          305 ALA  307 (614)
Q Consensus       305 iL~  307 (614)
                      +++
T Consensus       327 l~~  329 (352)
T 2jii_A          327 LRN  329 (352)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            977


No 221
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2e-42  Score=375.07  Aligned_cols=262  Identities=18%  Similarity=0.188  Sum_probs=199.1

Q ss_pred             ccccCCCC-CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc-CChHHHHHHHHHHHHHHhcCC-CCcce-----
Q 007177           10 FFSEYGDA-SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-EHISDAARILREIKLLRLLRH-PDIVE-----   81 (614)
Q Consensus        10 ~~~~~~~~-~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~H-pnIv~-----   81 (614)
                      +.++.+.. ..|.+.+.||+|+||+||+|.+..+|+.||||++.... ........+.+|+.+++.++| .|+..     
T Consensus        69 ~~s~~~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~  148 (413)
T 3dzo_A           69 VESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL  148 (413)
T ss_dssp             EEESSSSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHT
T ss_pred             EeccCCCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhc
Confidence            33343333 34899999999999999999999999999999987332 222235678899999999987 32211     


Q ss_pred             ----eeeEec------------CCCCCCCCcEEEEEecCCCcHHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHH
Q 007177           82 ----IKHIML------------PPSRRDFKDIYVVFELMESDLHQVIKA-------NDDLTREHYQFFLYQLLRALKYIH  138 (614)
Q Consensus        82 ----l~~v~~------------~~~~~~~~~~ylV~E~~~g~L~~~i~~-------~~~lse~~~~~i~~QIl~aL~yLH  138 (614)
                          ..++..            .........++++|+++.++|.+++..       ...+++..+..|+.||+.||.|||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  228 (413)
T 3dzo_A          149 RFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH  228 (413)
T ss_dssp             CBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                111111            111111345899999999999998851       234788899999999999999999


Q ss_pred             hCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCCCccccccccCCccccCcccccc--------cCCCCCCcccch
Q 007177          139 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS--------FFSKYTPAIDIW  210 (614)
Q Consensus       139 s~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~--------~~~~y~~~~DIW  210 (614)
                      ++||+||||||+|||++.++.+||+|||+++.....      ....+| +.|+|||++.+        ....|+.++|||
T Consensus       229 ~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw  301 (413)
T 3dzo_A          229 HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW  301 (413)
T ss_dssp             HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred             hCCcccCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence            999999999999999999999999999998764322      244577 99999999831        114588899999


Q ss_pred             hHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHH
Q 007177          211 SIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLER  290 (614)
Q Consensus       211 SLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~  290 (614)
                      ||||++|+|++|+.||.+.+..+...                                   .....+..+++.+.+||.+
T Consensus       302 SlGvil~elltg~~Pf~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~li~~  346 (413)
T 3dzo_A          302 TLGLAIYWIWCADLPNTDDAALGGSE-----------------------------------WIFRSCKNIPQPVRALLEG  346 (413)
T ss_dssp             HHHHHHHHHHHSSCCCCTTGGGSCSG-----------------------------------GGGSSCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcchhhhHH-----------------------------------HHHhhcccCCHHHHHHHHH
Confidence            99999999999999997765321110                                   0111234678999999999


Q ss_pred             hcCCCCCCCCCHHHHHcCccccc
Q 007177          291 LLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       291 mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                      ||+.||++|||+.++|+||||+.
T Consensus       347 ~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          347 FLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             HTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HccCChhhCcCHHHHHhCHHHHH
Confidence            99999999999999999999974


No 222
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=9.6e-42  Score=347.59  Aligned_cols=248  Identities=29%  Similarity=0.380  Sum_probs=204.6

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCC-------
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPS-------   90 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~-------   90 (614)
                      ++|++++.||+|+||.||+|.+..+++.||+|++....      ..+.+|+.+|+.++||||+++++++....       
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            57999999999999999999999999999999997532      24668999999999999999999874311       


Q ss_pred             ----CCCCCcEEEEEecCCC-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEe
Q 007177           91 ----RRDFKDIYVVFELMES-DLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKIC  163 (614)
Q Consensus        91 ----~~~~~~~ylV~E~~~g-~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~  163 (614)
                          ......+|+|||||++ +|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence                1224568999999995 999999754  579999999999999999999999999999999999999999999999


Q ss_pred             ecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          164 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       164 DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      |||++........    .....+|+.|+|||++.+  ..++.++|||||||++|+|++|..||....  ..         
T Consensus       165 Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~---------  227 (284)
T 2a19_B          165 DFGLVTSLKNDGK----RTRSKGTLRYMSPEQISS--QDYGKEVDLYALGLILAELLHVCDTAFETS--KF---------  227 (284)
T ss_dssp             CCTTCEESSCCSC----CCCCCSCCTTSCHHHHHC--SCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--HH---------
T ss_pred             cchhheecccccc----ccccCCcccccChhhhcc--CCCcchhhhHHHHHHHHHHHhcCCcchhHH--HH---------
Confidence            9999987544322    234579999999999887  678999999999999999999998873211  00         


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccc
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK  312 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~  312 (614)
                                        ...+...      .....+++.+.+||.+||..||.+|||+.|+++|.|.-
T Consensus       228 ------------------~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          228 ------------------FTDLRDG------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             ------------------HHHHHTT------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------------------HHHhhcc------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                              0001110      01234678999999999999999999999999998754


No 223
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=1.6e-41  Score=346.08  Aligned_cols=248  Identities=26%  Similarity=0.375  Sum_probs=204.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+. ++..||||++.....   ....+.+|+.+|+.++||||+++++++.      ..
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~   80 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT------QE   80 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC------SS
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc------CC
Confidence            3478999999999999999999875 567899999975322   3456889999999999999999999873      23


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           96 DIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~--~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..|+||||+. ++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence            4799999997 69999986543  69999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....  ......++..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+.+..+...          
T Consensus       161 ~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----------  226 (279)
T 1qpc_A          161 DNEYT--AREGAKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------  226 (279)
T ss_dssp             SSCEE--CCTTCCCCTTTSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------
T ss_pred             Ccccc--cccCCCCccCccChhhhcc--CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc----------
Confidence            33211  1233457888999999876  578999999999999999999 99999887765544333210          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                       ..   ......+++.+.+||.+||..||++|||++++++
T Consensus       227 -----------------~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          227 -----------------YR---MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             -----------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------cC---CCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                             00   0112457889999999999999999999999976


No 224
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=6.9e-42  Score=350.28  Aligned_cols=260  Identities=21%  Similarity=0.332  Sum_probs=201.4

Q ss_pred             cccCCCCCCeEEEeEeeecCceEEEEEEECC-CCc--EEEEEEecCcc-CChHHHHHHHHHHHHHHhcCCCCcceeeeEe
Q 007177           11 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTH-TGE--KVAIKKIHDIF-EHISDAARILREIKLLRLLRHPDIVEIKHIM   86 (614)
Q Consensus        11 ~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~-tg~--~vAIK~i~~~~-~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~   86 (614)
                      .+..-..++|++++.||+|+||.||+|.+.. ++.  .||||+++... ........+.+|+.+++.++||||+++++++
T Consensus        11 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           11 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             CCEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            3344556799999999999999999998643 333  68999987532 2334567889999999999999999999998


Q ss_pred             cCCCCCCCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEee
Q 007177           87 LPPSRRDFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICD  164 (614)
Q Consensus        87 ~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~D  164 (614)
                      ...      ..++||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|
T Consensus        91 ~~~------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~D  164 (291)
T 1u46_A           91 LTP------PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD  164 (291)
T ss_dssp             CSS------SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECC
T ss_pred             ccC------CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcc
Confidence            432      3799999998 6999998764 5699999999999999999999999999999999999999999999999


Q ss_pred             cCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhC
Q 007177          165 FGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       165 FGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ||++.................+|..|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+..+.+..+...  
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--  240 (291)
T 1u46_A          165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE--  240 (291)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS--
T ss_pred             ccccccccccccchhhhccCCCCceeeCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc--
Confidence            9999876544332222334567889999999876  578899999999999999999 99999888765544433211  


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                              ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       241 ------------------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          241 ------------------------GER---LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             ------------------------CCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------------CCC---CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                                    000   1122467899999999999999999999999987


No 225
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.5e-42  Score=378.70  Aligned_cols=250  Identities=22%  Similarity=0.430  Sum_probs=209.4

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ...+|++.+.||+|+||.||+|.++.++..||||+++...   .....+.+|+.+|+.++||||+++++++     .+..
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~  289 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREP  289 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSS
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCC
Confidence            3467999999999999999999999999999999997532   2356788999999999999999999998     3446


Q ss_pred             cEEEEEecCC-CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           96 DIYVVFELME-SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      .+|||||||. ++|.+++...  ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  369 (495)
T 1opk_A          290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT  369 (495)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred             cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence            6899999998 6999999864  459999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      .....  ......++..|+|||++..  ..++.++|||||||++|||++ |..||.+.+..+....+..           
T Consensus       370 ~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----------  434 (495)
T 1opk_A          370 GDTYT--AHAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----------  434 (495)
T ss_dssp             TCCEE--CCTTCCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----------
T ss_pred             CCcee--ecCCCcCCcceeCHhHHhc--CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----------
Confidence            33211  1223456788999999876  578999999999999999999 9999988775544433311           


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                      ...   ......+++.+.+||.+||+.||.+|||+.++++
T Consensus       435 ----------------~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          435 ----------------DYR---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             ----------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCC---CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                            000   0122467889999999999999999999999976


No 226
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=4.1e-41  Score=368.73  Aligned_cols=245  Identities=24%  Similarity=0.393  Sum_probs=203.4

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++++.||+|+||.||+|.+.  |+.||||+++...    ....+.+|+.+|+.++||||+++++++..    ..
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~  259 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EK  259 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TT
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CC
Confidence            34578999999999999999999774  7899999997532    45678899999999999999999999743    23


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKANDD--LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~--lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ..+|||||||+ |+|.+++...+.  +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       260 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            46999999998 599999987543  799999999999999999999999999999999999999999999999999854


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ....      ....++..|+|||++.+  ..++.++|||||||++|||++ |..||.+.+..+.+..+..          
T Consensus       340 ~~~~------~~~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----------  401 (450)
T 1k9a_A          340 SSTQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----------  401 (450)
T ss_dssp             C------------CCCTTTSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----------
T ss_pred             cccc------cCCCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----------
Confidence            3221      22357889999999976  689999999999999999998 9999988765544433321          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                       ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       402 -----------------~~~---~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          402 -----------------GYK---MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             -----------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------CCC---CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                             000   1122467899999999999999999999999975


No 227
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.2e-41  Score=355.13  Aligned_cols=269  Identities=23%  Similarity=0.334  Sum_probs=206.7

Q ss_pred             CCCe-EEEeEeeecCceEEEEEE----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           17 ASRY-KIQEVIGKGSYGVVCSAI----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        17 ~~rY-~i~~~LG~G~~G~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      .++| ++++.||+|+||.||++.    +..+++.||||+++.. ........+.+|+.+|+.++||||+++++++...  
T Consensus        29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  105 (318)
T 3lxp_A           29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA--  105 (318)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred             cHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC--
Confidence            3455 999999999999998774    4458899999999854 3445667789999999999999999999998542  


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                       +...+|+|||||+ ++|.+++... .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus       106 -~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          106 -GAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             -TTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             -CCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence             2467899999998 5999999765 499999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          171 AFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       171 ~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ...............+|..|+|||++.+  ..++.++|||||||++|+|++|..||......     .....+...... 
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~-  255 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKE--YKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-----FLELIGIAQGQM-  255 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-----HHHHHCSCCHHH-
T ss_pred             ccccccccccccCCCCCceeeChHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCcccccchh-----hhhhhcccccch-
Confidence            6543332222345578899999999876  57889999999999999999999999654321     111111111100 


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                            ........+......   .....+++.+.+||.+||+.||.+|||++|+++
T Consensus       256 ------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          256 ------TVLRLTELLERGERL---PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             ------HHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------hHHHHHHHHhcccCC---CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                  011111111111111   223467899999999999999999999999985


No 228
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.3e-42  Score=369.98  Aligned_cols=273  Identities=22%  Similarity=0.369  Sum_probs=206.8

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++..... ......+.+|+.+|+.++||||+++++++...   +.
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~   81 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TT   81 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TT
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CC
Confidence            346789999999999999999999999999999999975321 22356678999999999999999999998543   23


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE----CCCCcEEEeecC
Q 007177           95 KDIYVVFELME-SDLHQVIKAND---DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA----NANCKLKICDFG  166 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~---~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi----~~~~~vKL~DFG  166 (614)
                      ...|+|||||+ ++|.+++....   .+++..++.|+.||+.||.|||+.||+||||||+|||+    +.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            46899999998 59999997543   39999999999999999999999999999999999999    778889999999


Q ss_pred             ccccccCCCCCccccccccCCccccCccccccc------CCCCCCcccchhHHHHHHHHHhCCCCCCCCC----hhHHHH
Q 007177          167 LARVAFNDTPTTIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN----VVHQLD  236 (614)
Q Consensus       167 la~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~----~~~~l~  236 (614)
                      +++......    .....+||+.|+|||++.+.      ...|+.++|||||||++|+|++|+.||.+..    ..+.+.
T Consensus       162 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~  237 (396)
T 4eut_A          162 AARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY  237 (396)
T ss_dssp             GCEECCCGG----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHH
T ss_pred             CceEccCCC----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHH
Confidence            998653322    22446799999999987531      0357789999999999999999999996533    222222


Q ss_pred             HHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCC-------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          237 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-------FPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       237 ~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                      .+..  +.|. ..+......          ......+...       ...+++.+.+||.+||+.||++|||+++++++
T Consensus       238 ~~~~--~~p~-~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          238 KIIT--GKPS-GAISGVQKA----------ENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHH--SCCT-TCCEEEECS----------TTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HHhc--CCCc-ccchhheec----------cCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            2221  2221 111111000          0011111111       12345678899999999999999999998653


No 229
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=3.4e-42  Score=359.29  Aligned_cols=271  Identities=20%  Similarity=0.307  Sum_probs=204.8

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      ....++|++.+.||+|+||.||+|.+ .+|+.||||++...... .....+.+|+.+|+.++||||+++++++.     +
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~   98 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCM-----T   98 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEEC-----C
T ss_pred             HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEe-----c
Confidence            34567999999999999999999974 46899999999753211 12235789999999999999999999984     4


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeecCCCCcEEECCCCcEEEeec
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND----DLTREHYQFFLYQLLRALKYIHTA---NVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~----~lse~~~~~i~~QIl~aL~yLHs~---gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                      ....|+|||||. ++|.+++....    .+++..+..|+.||+.||.|||+.   ||+||||||+|||++.++.+||+||
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Df  178 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF  178 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCC
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccC
Confidence            456799999998 59999998643    499999999999999999999999   9999999999999999999999999


Q ss_pred             CccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHHh
Q 007177          166 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN-----VVHQLDLMTD  240 (614)
Q Consensus       166 Gla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~-----~~~~l~~i~~  240 (614)
                      |+++.......  .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||....     .......+..
T Consensus       179 g~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          179 GLAKLMDYKDT--HVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             SSCEECCSSSS--CEECCCCSCGGGCCHHHHHH--SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             ccccccCcccc--cccccccCCcCccCHHHhcc--CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            99986543222  22344579999999999876  578999999999999999999999995311     1111111110


Q ss_pred             hhCCCchhhhhhhhchhHHHHHHhhcccCCCcc-cCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          241 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQF-SQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       241 ~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                      .+.......                  ...... .......+..+.+|+.+||+.||.+|||+.|+|+|-+-..
T Consensus       255 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          255 LLKEKKLEA------------------LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             TTSSCCSTT------------------SSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             Hhhchhhhh------------------hcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            000000000                  000000 0111123467899999999999999999999999865433


No 230
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.1e-41  Score=383.90  Aligned_cols=250  Identities=21%  Similarity=0.310  Sum_probs=203.5

Q ss_pred             eEEE-eEeeecCceEEEEEEE--CCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCc
Q 007177           20 YKIQ-EVIGKGSYGVVCSAID--THTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        20 Y~i~-~~LG~G~~G~V~~a~d--~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~   96 (614)
                      +.+. +.||+|+||.||+|.+  +.+++.||||+++...........+.+|+.+|+.|+||||+++++++.      ...
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~  443 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AES  443 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSS
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCC
Confidence            4443 4899999999999954  456789999999865555556678999999999999999999999883      234


Q ss_pred             EEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCC
Q 007177           97 IYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT  175 (614)
Q Consensus        97 ~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~  175 (614)
                      +|||||||. ++|.+++.....+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             EEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            899999998 5999999998899999999999999999999999999999999999999999999999999998765433


Q ss_pred             CCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          176 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       176 ~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                      ......+...+|..|+|||++.+  ..|+.++|||||||++|||++ |+.||.+.+..+....+...             
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-------------  588 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-------------  588 (635)
T ss_dssp             -----------CGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------------
T ss_pred             cccccccCCCCceeeeChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------
Confidence            22222334467889999999976  689999999999999999998 99999988765554444221             


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                    ...   .....+++.+.+||.+||..||++|||++++++
T Consensus       589 --------------~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          589 --------------ERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             --------------CCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------------CCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                          111   122457889999999999999999999999975


No 231
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.1e-41  Score=371.40  Aligned_cols=248  Identities=25%  Similarity=0.387  Sum_probs=205.6

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+. ++..||||+++...   .....+.+|+.+|+.|+||||+++++++.      ..
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~  255 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KE  255 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SS
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CC
Confidence            4568999999999999999999885 46789999997532   23567889999999999999999999983      24


Q ss_pred             cEEEEEecCC-CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           96 DIYVVFELME-SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~--~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      .+|||||||. |+|.+++...  ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            5899999998 6999999754  368999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ....  .......++..|+|||++..  ..++.++|||||||++|||++ |..||.+.+..+.+..+....         
T Consensus       336 ~~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~---------  402 (454)
T 1qcf_A          336 DNEY--TAREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---------  402 (454)
T ss_dssp             CHHH--HTTCSSSSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC---------
T ss_pred             CCce--eccCCCcccccccCHHHhcc--CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---------
Confidence            2211  11123356788999999976  679999999999999999999 999999887665554432210         


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        ..   .....+++.+.+||.+||..||.+|||++++++
T Consensus       403 ------------------~~---~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          403 ------------------RM---PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ------------------CC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CC---CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                              00   112357889999999999999999999999976


No 232
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.3e-41  Score=355.99  Aligned_cols=281  Identities=22%  Similarity=0.290  Sum_probs=199.1

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHH--HHhcCCCCcceeeeEecCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKL--LRLLRHPDIVEIKHIMLPPSRR   92 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~i--L~~L~HpnIv~l~~v~~~~~~~   92 (614)
                      -..++|++++.||+|+||.||+|.+  +++.||||++...     ....+..|..+  +..++||||+++++.+......
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred             cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence            4567999999999999999999965  6899999998642     22333444444  4568999999999865443334


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---------CeEeecCCCCcEEECCCCcEEE
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA---------NVYHRDLKPKNILANANCKLKI  162 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~---------gIvHrDLKP~NILi~~~~~vKL  162 (614)
                      +...+|+|||||+ ++|.+++.... +++..+..|+.||+.||.|||+.         ||+||||||+|||++.++.+||
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             CCceEEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            5567899999997 59999997654 69999999999999999999999         9999999999999999999999


Q ss_pred             eecCccccccCCCC-----CccccccccCCccccCcccccccC-----CCCCCcccchhHHHHHHHHHhCCCCC-CCCCh
Q 007177          163 CDFGLARVAFNDTP-----TTIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAEVLTGKPLF-PGKNV  231 (614)
Q Consensus       163 ~DFGla~~~~~~~~-----~~~~~~~~vgt~~Y~APEvl~~~~-----~~y~~~~DIWSLG~Il~eLltG~~pF-~g~~~  231 (614)
                      +|||+++.......     ........+||+.|+|||++.+..     ..++.++|||||||++|||++|..|| ++...
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            99999986543221     111223467999999999987521     24567899999999999999996554 44332


Q ss_pred             hHHHHHHH-hhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCC---CCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          232 VHQLDLMT-DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN---ADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       232 ~~~l~~i~-~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      .+....+. .....|..+.+.        ....  .......+...++.   +++.+.+||.+||..||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQ--------VLVS--REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHH--------HHHT--TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hHHHHhhhcccCCCchHHHHH--------hhhc--ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            11111111 111122211111        1111  11112222222222   4567999999999999999999999955


Q ss_pred             ------Cccccc
Q 007177          308 ------DPYFKG  313 (614)
Q Consensus       308 ------hp~f~~  313 (614)
                            ++|-++
T Consensus       312 ~L~~ll~~~~~~  323 (336)
T 3g2f_A          312 RMAELMMIWERN  323 (336)
T ss_dssp             HHHHHHHCCCC-
T ss_pred             HHHHHHHHHHhc
Confidence                  566543


No 233
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=3.4e-41  Score=348.49  Aligned_cols=268  Identities=22%  Similarity=0.317  Sum_probs=205.6

Q ss_pred             CCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCcc--CChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           14 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF--EHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        14 ~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~--~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      |.....|...+.||+|+||.||+|.+  ++..||||++....  ........+.+|+.+|+.++||||+++++++     
T Consensus        27 f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----   99 (307)
T 2nru_A           27 FDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS-----   99 (307)
T ss_dssp             TCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             cccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----
Confidence            44445566679999999999999975  68899999987532  2334567788999999999999999999998     


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKA---NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL  167 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~---~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGl  167 (614)
                      .+....|+||||++ ++|.+++..   ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus       100 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~  179 (307)
T 2nru_A          100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGL  179 (307)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence            34467899999997 699999874   34699999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      ++........ .......||+.|+|||++.+   .++.++|||||||++|+|++|.+||.+.+....+..+.........
T Consensus       180 ~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  255 (307)
T 2nru_A          180 ARASEKFAQT-VMTSRIVGTTAYMAPEALRG---EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK  255 (307)
T ss_dssp             CEECCSCSSC-EECSSCCSCGGGCCHHHHTT---EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC
T ss_pred             cccccccccc-ccccccCCCcCcCChHHhcC---CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh
Confidence            9865432221 12234579999999999875   5789999999999999999999999876543322222211100000


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                               ....++   .    ..+.......+..+.+||.+||..||.+|||+++++++
T Consensus       256 ---------~~~~~~---~----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          256 ---------TIEDYI---D----KKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             ---------CHHHHS---C----SSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ---------hhhhhc---c----ccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                     000000   0    00111112345678999999999999999999999874


No 234
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.1e-41  Score=347.25  Aligned_cols=244  Identities=30%  Similarity=0.454  Sum_probs=194.3

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      +.++|++.+.||+|+||.||+|.+.  ++.||||++..    ......+.+|+.+|+.++||||+++++++.       +
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~   72 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACL-------N   72 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------T
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------C
Confidence            4568999999999999999999764  78999999864    245677889999999999999999999873       2


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEeecCCCCcEEECCCCc-EEEeecCc
Q 007177           96 DIYVVFELME-SDLHQVIKAND---DLTREHYQFFLYQLLRALKYIHT---ANVYHRDLKPKNILANANCK-LKICDFGL  167 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~---~lse~~~~~i~~QIl~aL~yLHs---~gIvHrDLKP~NILi~~~~~-vKL~DFGl  167 (614)
                      ..|+||||++ ++|.+++....   .+++..+..++.||+.||.|||+   +||+||||||+|||++.++. +||+|||+
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~  152 (307)
T 2eva_A           73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT  152 (307)
T ss_dssp             TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred             CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence            3699999998 59999998765   47899999999999999999999   89999999999999998886 79999999


Q ss_pred             cccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          168 ARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       168 a~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      +......      .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||......... .+         
T Consensus       153 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~---------  214 (307)
T 2eva_A          153 ACDIQTH------MTNNKGSAAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IM---------  214 (307)
T ss_dssp             ------------------CCTTSSCHHHHTC--CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HH---------
T ss_pred             ccccccc------cccCCCCCceEChhhhCC--CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HH---------
Confidence            9754322      133469999999999987  68999999999999999999999999754321110 00         


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                     .......   .......+++.+.+||.+||+.||.+|||+++++++
T Consensus       215 ---------------~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          215 ---------------WAVHNGT---RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             ---------------HHHHTTC---CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------HHHhcCC---CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                           0000111   112235678899999999999999999999999873


No 235
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.5e-41  Score=360.67  Aligned_cols=254  Identities=22%  Similarity=0.359  Sum_probs=196.3

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCC---cEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTG---EKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg---~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .+|++.+.||+|+||.||+|.+..++   ..||+|.++.. ........+.+|+.+|+.++||||+++++++..    ..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CC
Confidence            46889999999999999999875433   46899998753 344567789999999999999999999998742    33


Q ss_pred             CcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      +..|+|||||+ ++|.+++... ..+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            56799999998 5999999864 458999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCC-ccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          173 NDTPT-TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       173 ~~~~~-~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ..... ........+|+.|+|||++.+  ..++.++|||||||++|||++ |.+||.+.+..+....+..          
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~----------  311 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ----------  311 (373)
T ss_dssp             --------------CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT----------
T ss_pred             ccccccccccCCCCCcccccChHHhcC--CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc----------
Confidence            32211 111234567889999999876  689999999999999999999 7889987765444333211          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                       ....   .....+++.+.+||.+||..||.+|||+++++++
T Consensus       312 -----------------~~~~---~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          312 -----------------GRRL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             -----------------TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------CCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                             0000   1123578899999999999999999999999874


No 236
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=358.35  Aligned_cols=246  Identities=15%  Similarity=0.165  Sum_probs=195.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEE-----EECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC---CCCcceeeeEec
Q 007177           16 DASRYKIQEVIGKGSYGVVCSA-----IDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR---HPDIVEIKHIML   87 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a-----~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~---HpnIv~l~~v~~   87 (614)
                      ..++|.+.+.||+|+||.||+|     .+..+++.||||++...     ....+.+|+.+++.++   |+||+.+++++ 
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~-  136 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAH-  136 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE-
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheee-
Confidence            3578999999999999999999     47788999999999752     2345677888888887   99999999998 


Q ss_pred             CCCCCCCCcEEEEEecCC-CcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECC-----
Q 007177           88 PPSRRDFKDIYVVFELME-SDLHQVIKA-----NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA-----  156 (614)
Q Consensus        88 ~~~~~~~~~~ylV~E~~~-g~L~~~i~~-----~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~-----  156 (614)
                          ...+..|||||||+ |+|.+++..     ...+++..++.|+.||+.||.|||+.||+||||||+|||++.     
T Consensus       137 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          137 ----LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             ----ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC
T ss_pred             ----ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc
Confidence                34567899999998 699999973     457999999999999999999999999999999999999998     


Q ss_pred             ------CCcEEEeecCccccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Q 007177          157 ------NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN  230 (614)
Q Consensus       157 ------~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~  230 (614)
                            ++.+||+|||+|+....... ....+..+||+.|+|||++.+  ..|+.++|||||||++|||++|+.||....
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~  289 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSN--KPWNYQIDYFGVAATVYCMLFGTYMKVKNE  289 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred             cccccccCCEEEeeCchhhhhhccCC-CceeeeecCCCCCCChHHhcC--CCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence                  89999999999976432222 223456789999999999987  579999999999999999999999995433


Q ss_pred             hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCc
Q 007177          231 VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP  309 (614)
Q Consensus       231 ~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp  309 (614)
                      ....                                 .....+...  ..++.+.+|+..||+.+|.+|++..+.|.+.
T Consensus       290 ~~~~---------------------------------~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          290 GGEC---------------------------------KPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             TTEE---------------------------------EECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             CCce---------------------------------eechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            1000                                 000000011  2356788999999999999997655555543


No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=347.75  Aligned_cols=271  Identities=21%  Similarity=0.355  Sum_probs=209.1

Q ss_pred             CCCCeEEEeEeeecCceEEEEEE----ECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAI----DTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSR   91 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~   91 (614)
                      ..++|++++.||+|+||.||+|.    +..+++.||||++...  .......+.+|+.+|+.++||||+++++++...  
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  114 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--  114 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec--
Confidence            45679999999999999999998    4678999999999753  345567889999999999999999999988543  


Q ss_pred             CCCCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177           92 RDFKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus        92 ~~~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                       +...+|+||||++ ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus       115 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          115 -GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             ----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             -CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence             2346899999998 5999999875 469999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhh
Q 007177          170 VAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT  249 (614)
Q Consensus       170 ~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~  249 (614)
                      ................++..|+|||++.+  ..++.++|||||||++|+|++|..||....     ..+....+......
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~tg~~~~~~~~-----~~~~~~~~~~~~~~  266 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPP-----AEFMRMIGNDKQGQ  266 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-----HHHHHHHCTTCCTH
T ss_pred             hccccccccccccCCCCceeEECchhhcC--CCCCchhhHHHHHHHHHHHHhcCCCCCCCH-----HHHHHhhccccchh
Confidence            76543322222234567888999999876  578899999999999999999999885432     11112222222111


Q ss_pred             hhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          250 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       250 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ..      .......+......   .....+++.+.+||.+||..||.+|||+.++++
T Consensus       267 ~~------~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          267 MI------VFHLIELLKNNGRL---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HH------HHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hh------HHHHHHHhhcCCCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            10      01111111111111   123467899999999999999999999999975


No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.1e-40  Score=368.52  Aligned_cols=259  Identities=18%  Similarity=0.251  Sum_probs=204.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++++.||+|+||.||+|.+..+++.||||++......    ..+.+|+++++.|+|++++..+..+.    .+..
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~----~~~~   76 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFG----VEGD   76 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEE----EETT
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEE----eeCC
Confidence            357899999999999999999999999999999988643222    24778999999998765554444442    3456


Q ss_pred             cEEEEEecCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEE---CCCCcEEEeecCccccc
Q 007177           96 DIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLARVA  171 (614)
Q Consensus        96 ~~ylV~E~~~g~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi---~~~~~vKL~DFGla~~~  171 (614)
                      ..|||||||.++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+||||   +.++.+||+|||+++..
T Consensus        77 ~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           77 YNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            7899999998899999985 5679999999999999999999999999999999999999   68889999999999876


Q ss_pred             cCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCch
Q 007177          172 FNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL  247 (614)
Q Consensus       172 ~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~  247 (614)
                      .......    ......+||+.|+|||++.+  ..++.++||||||||||||++|+.||.+.........+...      
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i------  228 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------  228 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHH------
T ss_pred             cCCccccccccccccccCCCccccCHHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHH------
Confidence            5433211    11235689999999999987  67999999999999999999999999886543332222110      


Q ss_pred             hhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          248 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       248 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                            .....           ..........+++++.+||.+||..||++||+++++++
T Consensus       229 ------~~~~~-----------~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          229 ------SEKKV-----------ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             ------HHHHH-----------HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ------hhccc-----------cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                  00000           00111122456889999999999999999999999866


No 239
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.2e-40  Score=365.30  Aligned_cols=248  Identities=26%  Similarity=0.380  Sum_probs=200.5

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..++|++.+.||+|+||.||+|.+.. +..||||+++....   ....+.+|+.+|+.|+||||+++++++..      .
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~  251 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------E  251 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS------S
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------C
Confidence            44689999999999999999999865 46799999975332   24568899999999999999999999832      4


Q ss_pred             cEEEEEecCC-CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           96 DIYVVFELME-SDLHQVIKA--NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~--~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      .+|||||||. ++|.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  331 (452)
T ss_dssp             SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred             ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence            5899999998 599999964  3469999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhhh
Q 007177          173 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTIS  251 (614)
Q Consensus       173 ~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i~  251 (614)
                      ......  .....++..|+|||++.+  ..++.++|||||||++|||++ |..||.+.+..+.+..+...          
T Consensus       332 ~~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~----------  397 (452)
T 1fmk_A          332 DNEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----------  397 (452)
T ss_dssp             -------------CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------
T ss_pred             CCceec--ccCCcccccccCHhHHhc--CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----------
Confidence            322111  123456788999999876  679999999999999999999 99999988765554443211          


Q ss_pred             hhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          252 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       252 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                       ...   ...+.+++.+.+||.+||..||.+|||++++++
T Consensus       398 -----------------~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          398 -----------------YRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             -----------------CCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------CCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                             000   112457889999999999999999999999987


No 240
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.8e-41  Score=350.10  Aligned_cols=266  Identities=27%  Similarity=0.352  Sum_probs=194.0

Q ss_pred             cccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHh--cCCCCcceeeeEecC
Q 007177           11 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRL--LRHPDIVEIKHIMLP   88 (614)
Q Consensus        11 ~~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~--L~HpnIv~l~~v~~~   88 (614)
                      .......++|++++.||+|+||.||+|.+.  ++.||||++...     ......+|.+++..  ++||||+++++++..
T Consensus        30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~  102 (337)
T 3mdy_A           30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIK  102 (337)
T ss_dssp             HHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             ccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence            333444578999999999999999999874  899999998642     23344556666654  489999999999854


Q ss_pred             CCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeecCCCCcEEECCCCc
Q 007177           89 PSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA--------NVYHRDLKPKNILANANCK  159 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILi~~~~~  159 (614)
                      .. .....+|+|||||+ ++|.++++.. .+++..++.++.||+.||.|||+.        ||+||||||+|||++.++.
T Consensus       103 ~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~  180 (337)
T 3mdy_A          103 GT-GSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT  180 (337)
T ss_dssp             SC-GGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred             CC-CCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence            32 12367999999998 4999999765 699999999999999999999999        9999999999999999999


Q ss_pred             EEEeecCccccccCCCCCc-cccccccCCccccCcccccccCCCCCCc------ccchhHHHHHHHHHhC----------
Q 007177          160 LKICDFGLARVAFNDTPTT-IFWTDYVATRWYRAPELCGSFFSKYTPA------IDIWSIGCIFAEVLTG----------  222 (614)
Q Consensus       160 vKL~DFGla~~~~~~~~~~-~~~~~~vgt~~Y~APEvl~~~~~~y~~~------~DIWSLG~Il~eLltG----------  222 (614)
                      +||+|||+++......... ......+||+.|+|||++.+  ..++..      +|||||||++|||++|          
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~  258 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE--SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY  258 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTT--CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhccc--ccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence            9999999997654332211 11234689999999999876  344444      9999999999999999          


Q ss_pred             CCCCCCCChhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCC--CCCCCHHHHHHHHHhcCCCCCCCC
Q 007177          223 KPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK--FPNADPSALRLLERLLAFDPKDRP  300 (614)
Q Consensus       223 ~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~s~~l~dLI~~mL~~DP~~Rp  300 (614)
                      ..||......+           +....        ...... . ......+...  ...+++.+.+||.+||+.||.+||
T Consensus       259 ~~p~~~~~~~~-----------~~~~~--------~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  317 (337)
T 3mdy_A          259 QLPYHDLVPSD-----------PSYED--------MREIVC-I-KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL  317 (337)
T ss_dssp             CCTTTTTSCSS-----------CCHHH--------HHHHHT-T-SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred             cccHhhhcCCC-----------Cchhh--------hHHHHh-h-hccCccccccchhhHHHHHHHHHHHHhhhhChhhCC
Confidence            55664432100           00000        000000 0 0001111111  123556799999999999999999


Q ss_pred             CHHHHHcC
Q 007177          301 TAEEALAD  308 (614)
Q Consensus       301 sa~eiL~h  308 (614)
                      |++++++|
T Consensus       318 s~~ell~~  325 (337)
T 3mdy_A          318 TALRVKKT  325 (337)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999886


No 241
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.2e-40  Score=375.22  Aligned_cols=252  Identities=21%  Similarity=0.333  Sum_probs=200.7

Q ss_pred             CCCeEEEe-EeeecCceEEEEEEECC--CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQE-VIGKGSYGVVCSAIDTH--TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~-~LG~G~~G~V~~a~d~~--tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|.+.+ .||+|+||.||+|.++.  ++..||||+++... .......+.+|+.+|+.++||||+++++++..     
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-----  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-----  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-----
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-----
Confidence            44566666 89999999999998763  55679999997542 23456778999999999999999999999842     


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAN-DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~-~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                       ..+|||||||. |+|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence             35899999998 5999998654 46999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ..............+++.|+|||++.+  ..|+.++|||||||++|||++ |..||.+.+..+....+..          
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~----------  554 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----------  554 (613)
T ss_dssp             C--------------CCTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT----------
T ss_pred             cCCCceeeeccCCCCccceeCHhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc----------
Confidence            433221111122346688999999976  689999999999999999998 9999998876555444321          


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                       ...   ......+++.+.+||.+||..||.+||+++++++
T Consensus       555 -----------------~~~---~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          555 -----------------GKR---MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             -----------------TCC---CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             -----------------CCC---CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                             101   1122457899999999999999999999999854


No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=6.5e-42  Score=388.72  Aligned_cols=284  Identities=25%  Similarity=0.335  Sum_probs=211.3

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCC-CCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPP-SRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~-~~~~~~   95 (614)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+|+.++||||+++++++... ......
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            47899999999999999999999999999999998753 3455667889999999999999999999987542 122356


Q ss_pred             cEEEEEecCC-CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCc---EEEeecCcc
Q 007177           96 DIYVVFELME-SDLHQVIKAND---DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLA  168 (614)
Q Consensus        96 ~~ylV~E~~~-g~L~~~i~~~~---~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~---vKL~DFGla  168 (614)
                      ..|+|||||+ ++|.+++....   .+++..++.|+.||+.||.|||+.||+||||||+|||++.++.   +||+|||++
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            7899999997 59999998754   5999999999999999999999999999999999999997765   999999999


Q ss_pred             ccccCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchh
Q 007177          169 RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD  248 (614)
Q Consensus       169 ~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~  248 (614)
                      ........    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+......+...   .......
T Consensus       172 ~~~~~~~~----~~~~~gt~~Y~APE~l~~--~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~---i~~~~~~  242 (676)
T 3qa8_A          172 KELDQGEL----CTEFVGTLQYLAPELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGK---VREKSNE  242 (676)
T ss_dssp             CBTTSCCC----CCCCCSCCTTCSSCSSCC--SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTT---CC-----
T ss_pred             cccccccc----cccccCCcccCChHHhcc--CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhh---hhcccch
Confidence            87543322    245689999999999987  68999999999999999999999999776432221100   0000000


Q ss_pred             hhhhhhchhHHHHHHhhcccCC-CcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCcccccCC
Q 007177          249 TISRVRNDKARRYLTSMRKKQP-VQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS  315 (614)
Q Consensus       249 ~i~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~~~  315 (614)
                      .+.......     ........ .........+++.+.+||.+||.+||++|||++++|+||||+.+.
T Consensus       243 ~~~~~~~l~-----g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          243 HIVVYDDLT-----GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             -CCSCCCCS-----SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             hhhhhhhhc-----cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            000000000     00000000 001112234678899999999999999999999999999998654


No 243
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.6e-40  Score=371.98  Aligned_cols=250  Identities=26%  Similarity=0.357  Sum_probs=205.5

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++.+.||+|+||.||+|.+.. +..||||+++....   ....+.+|+.+|+.|+||||+++++++..      
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~------  333 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------  333 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee------
Confidence            345689999999999999999998865 46799999985432   24568899999999999999999999832      


Q ss_pred             CcEEEEEecCC-CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKA--NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~--~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      ..+|||||||. ++|.+++..  ...+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       334 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            45899999998 599999964  346999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      .....  .......++..|+|||++..  ..++.++|||||||+||||++ |..||.+.+..+.+..+...         
T Consensus       414 ~~~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~---------  480 (535)
T 2h8h_A          414 EDNEY--TARQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---------  480 (535)
T ss_dssp             CCHHH--HTTCSTTSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT---------
T ss_pred             CCCce--ecccCCcCcccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---------
Confidence            32111  11123456788999999876  679999999999999999999 99999988765554443211         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                        ...   .....+++.+.+||.+||..||++|||++++++.
T Consensus       481 ------------------~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          481 ------------------YRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------CCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                              000   1124578899999999999999999999999873


No 244
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=346.18  Aligned_cols=255  Identities=20%  Similarity=0.241  Sum_probs=200.7

Q ss_pred             CCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           15 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        15 ~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ...++|++.+.||+|+||.||+|.+..   .+|+|+++...........+.+|+.+++.++||||+++++++.     +.
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~  101 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-----SP  101 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-----CS
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cC
Confidence            456899999999999999999998753   4999999754333334456778999999999999999999984     44


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCcccccc
Q 007177           95 KDIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF  172 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~  172 (614)
                      ..+|+||||++ ++|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+|||++ ++.+||+|||+++...
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG  180 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred             CceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence            56999999998 59999997654 699999999999999999999999999999999999998 6799999999987643


Q ss_pred             CCCC--CccccccccCCccccCccccccc-------CCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhC
Q 007177          173 NDTP--TTIFWTDYVATRWYRAPELCGSF-------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLG  243 (614)
Q Consensus       173 ~~~~--~~~~~~~~vgt~~Y~APEvl~~~-------~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g  243 (614)
                      ....  .........||+.|+|||++.+.       ...++.++|||||||++|+|++|..||.+.+.......+..   
T Consensus       181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---  257 (319)
T 2y4i_B          181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT---  257 (319)
T ss_dssp             -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT---
T ss_pred             cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc---
Confidence            2111  11122345689999999998642       13578999999999999999999999988775544333211   


Q ss_pred             CCchhhhhhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          244 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       244 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                              ...  .......++..+.+||.+||..||.+|||++++++
T Consensus       258 ------------------------~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          258 ------------------------GMK--PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ------------------------TCC--CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ------------------------CCC--CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                    000  01112356789999999999999999999999987


No 245
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.2e-42  Score=363.13  Aligned_cols=258  Identities=19%  Similarity=0.172  Sum_probs=193.5

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC------ChHHHHHHHHHHHHHHhcC---------C
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE------HISDAARILREIKLLRLLR---------H   76 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~------~~~~~~~i~~Ei~iL~~L~---------H   76 (614)
                      ...-..++|++++.||+|+||.||+|.+  +|+.||||++.....      .......+.+|+.+|+.|+         |
T Consensus        14 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h   91 (336)
T 2vuw_A           14 SHCLPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRT   91 (336)
T ss_dssp             HHHSCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBC
T ss_pred             hhhcccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccC
Confidence            3344567899999999999999999987  689999999975421      2223467889999998886         7


Q ss_pred             CCcceeeeEecCC-------------------------CCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHH
Q 007177           77 PDIVEIKHIMLPP-------------------------SRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQL  130 (614)
Q Consensus        77 pnIv~l~~v~~~~-------------------------~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QI  130 (614)
                      |||+++.+++...                         ...+...+|||||||. |++.+.+.. ..+++..++.|++||
T Consensus        92 ~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           92 EGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQL  170 (336)
T ss_dssp             CCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHH
T ss_pred             CchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHH
Confidence            7777777664211                         0113578999999997 555555533 568999999999999


Q ss_pred             HHHHHHHH-hCCeEeecCCCCcEEECCCC--------------------cEEEeecCccccccCCCCCccccccccCCcc
Q 007177          131 LRALKYIH-TANVYHRDLKPKNILANANC--------------------KLKICDFGLARVAFNDTPTTIFWTDYVATRW  189 (614)
Q Consensus       131 l~aL~yLH-s~gIvHrDLKP~NILi~~~~--------------------~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~  189 (614)
                      +.||.||| +.||+||||||+|||++.++                    .+||+|||+|+.....        ..+||+.
T Consensus       171 ~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------~~~gt~~  242 (336)
T 2vuw_A          171 TASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------IVVFCDV  242 (336)
T ss_dssp             HHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------EEECCCC
T ss_pred             HHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------cEEEeec
Confidence            99999999 99999999999999999887                    8999999999875422        2479999


Q ss_pred             ccCcccccccCCCCCCcccchhHHHH-HHHHHhCCCCCCCCChhH-HHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcc
Q 007177          190 YRAPELCGSFFSKYTPAIDIWSIGCI-FAEVLTGKPLFPGKNVVH-QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK  267 (614)
Q Consensus       190 Y~APEvl~~~~~~y~~~~DIWSLG~I-l~eLltG~~pF~g~~~~~-~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~  267 (614)
                      |+|||++.+.   .+.++||||||++ .++++.|..||.+..... ....+                       +... .
T Consensus       243 y~aPE~~~g~---~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~-----------------------~~~~-~  295 (336)
T 2vuw_A          243 SMDEDLFTGD---GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKM-----------------------LKQM-T  295 (336)
T ss_dssp             TTCSGGGCCC---SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHH-----------------------HHTC-C
T ss_pred             ccChhhhcCC---CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhh-----------------------hhhh-c
Confidence            9999999862   3889999998777 778889999984321101 11111                       1000 0


Q ss_pred             cCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH-cCcccc
Q 007177          268 KQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEAL-ADPYFK  312 (614)
Q Consensus       268 ~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL-~hp~f~  312 (614)
                      .........++.+++++++||++||++|     |++|+| +||||+
T Consensus       296 ~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          296 FKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             cCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            1111111223456789999999999987     999999 999995


No 246
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=5.2e-40  Score=344.46  Aligned_cols=261  Identities=24%  Similarity=0.291  Sum_probs=198.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHh--cCCCCcceeeeEecCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRL--LRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~--L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++..     .....+.+|+++++.  ++||||+++++++.... ...
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~~  112 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTW  112 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SSC
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Ccc
Confidence            46899999999999999999987  589999999864     234567789999987  78999999999985442 222


Q ss_pred             CcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeEeecCCCCcEEECCCCcEEEeec
Q 007177           95 KDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH--------TANVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        95 ~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLH--------s~gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                      ..+|+||||+++ +|.+++... .+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+||
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred             ceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence            479999999995 999999764 6999999999999999999999        899999999999999999999999999


Q ss_pred             CccccccCCCCCc-cccccccCCccccCcccccccCC----CCCCcccchhHHHHHHHHHhC----------CCCCCCCC
Q 007177          166 GLARVAFNDTPTT-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEVLTG----------KPLFPGKN  230 (614)
Q Consensus       166 Gla~~~~~~~~~~-~~~~~~vgt~~Y~APEvl~~~~~----~y~~~~DIWSLG~Il~eLltG----------~~pF~g~~  230 (614)
                      |+++......... .......||+.|+|||++.+...    .++.++|||||||++|+|++|          ..||....
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            9998765433211 12244579999999999875211    233689999999999999999          67776542


Q ss_pred             hhH-HHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCC--CCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          231 VVH-QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKF--PNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       231 ~~~-~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ..+ ....+.                    ..+  ........+...+  ...++.+.+||.+||+.||.+|||++++++
T Consensus       272 ~~~~~~~~~~--------------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~  329 (342)
T 1b6c_B          272 PSDPSVEEMR--------------------KVV--CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  329 (342)
T ss_dssp             CSSCCHHHHH--------------------HHH--TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cCcccHHHHH--------------------HHH--HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            110 000000                    000  0000111111111  123457899999999999999999999988


Q ss_pred             C
Q 007177          308 D  308 (614)
Q Consensus       308 h  308 (614)
                      |
T Consensus       330 ~  330 (342)
T 1b6c_B          330 T  330 (342)
T ss_dssp             H
T ss_pred             H
Confidence            6


No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=2.3e-39  Score=370.88  Aligned_cols=250  Identities=26%  Similarity=0.424  Sum_probs=204.9

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCC---CcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHT---GEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~   93 (614)
                      .++|++.+.||+|+||.||+|.+..+   +..||||++... ........+.+|+.+|+.++||||+++++++.      
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------  461 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------  461 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence            46899999999999999999998654   457999998753 34455678899999999999999999999873      


Q ss_pred             CCcEEEEEecCC-CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           94 FKDIYVVFELME-SDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        94 ~~~~ylV~E~~~-g~L~~~i~~~~-~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      .+.+|+|||||+ ++|.+++.... .+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus       462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            235799999999 69999998654 6999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhhhCCCchhhh
Q 007177          172 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSLDTI  250 (614)
Q Consensus       172 ~~~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt-G~~pF~g~~~~~~l~~i~~~~g~p~~~~i  250 (614)
                      ......  ......+|+.|+|||++.+  ..++.++|||||||++|||++ |.+||.+.+..+.+..+...         
T Consensus       542 ~~~~~~--~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~---------  608 (656)
T 2j0j_A          542 EDSTYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---------  608 (656)
T ss_dssp             CC------------CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT---------
T ss_pred             CCCcce--eccCCCCCcceeCHHHhcC--CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---------
Confidence            432211  1233467889999999976  689999999999999999997 99999988766555444221         


Q ss_pred             hhhhchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          251 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                                        ...   ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus       609 ------------------~~~---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          609 ------------------ERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCC---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                              011   123467899999999999999999999999976


No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1e-41  Score=350.69  Aligned_cols=261  Identities=25%  Similarity=0.313  Sum_probs=180.2

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHh--cCCCCcceeeeEecCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRL--LRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~--L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++..     .....+.+|.+++..  ++||||+++++++.... ...
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~   73 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTW   73 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSS
T ss_pred             cceeeehhhccCCCCeEEEEEEE--cCcceEEEEecc-----cchhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccc
Confidence            46899999999999999999965  589999999864     234556778888877  78999999999985432 122


Q ss_pred             CcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeEeecCCCCcEEECCCCcEEEeec
Q 007177           95 KDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH--------TANVYHRDLKPKNILANANCKLKICDF  165 (614)
Q Consensus        95 ~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLH--------s~gIvHrDLKP~NILi~~~~~vKL~DF  165 (614)
                      ..+|+|||||.+ +|.+++... .+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+||
T Consensus        74 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF  152 (303)
T 3gxj_A           74 TQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             EEEEEEEECCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred             ceeEEEEeccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence            378999999995 999999765 6899999999999999999999        999999999999999999999999999


Q ss_pred             CccccccCCCCCc-cccccccCCccccCcccccccCC----CCCCcccchhHHHHHHHHHhC----------CCCCCCCC
Q 007177          166 GLARVAFNDTPTT-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEVLTG----------KPLFPGKN  230 (614)
Q Consensus       166 Gla~~~~~~~~~~-~~~~~~vgt~~Y~APEvl~~~~~----~y~~~~DIWSLG~Il~eLltG----------~~pF~g~~  230 (614)
                      |+++......... ......+||+.|+|||++.+...    .++.++|||||||++|||++|          ..||....
T Consensus       153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~  232 (303)
T 3gxj_A          153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  232 (303)
T ss_dssp             CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred             CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence            9997654433221 11234579999999999875211    334689999999999999999          55553321


Q ss_pred             hhHHHHHHHhhhCCCchhhhhhhhchhHHHHHHhhcccCCCcccCCCC--CCCHHHHHHHHHhcCCCCCCCCCHHHHHc
Q 007177          231 VVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFP--NADPSALRLLERLLAFDPKDRPTAEEALA  307 (614)
Q Consensus       231 ~~~~l~~i~~~~g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~  307 (614)
                      ...           +..        ......+.  .......+...+.  ..++.+.+||.+||+.||.+|||++++++
T Consensus       233 ~~~-----------~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          233 PSD-----------PSV--------EEMRKVVC--EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             C-C-----------CCC--------C-CHHHHT--TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCC-----------ccH--------HHHHHHHH--HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            100           000        00000000  0011111111111  23357899999999999999999999987


No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=4.9e-39  Score=331.36  Aligned_cols=229  Identities=17%  Similarity=0.096  Sum_probs=186.7

Q ss_pred             CCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC-hHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCC
Q 007177           16 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH-ISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        16 ~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~   94 (614)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+++.++||||+++++++     .+.
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~  103 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTR  103 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EEC
Confidence            457899999999999999999999999999999999865332 45567889999999999999999999998     345


Q ss_pred             CcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccC
Q 007177           95 KDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN  173 (614)
Q Consensus        95 ~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~  173 (614)
                      +..|+|||||+ ++|.++++..  ..+.++..|+.||+.||.|||+.||+||||||+|||++.++.+||+++|       
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-------  174 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-------  174 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred             CcEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence            67999999998 5999998543  5677889999999999999999999999999999999999999998554       


Q ss_pred             CCCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhh
Q 007177          174 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV  253 (614)
Q Consensus       174 ~~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~  253 (614)
                                      |++         .++.++|||||||++|+|++|+.||.+.+..+.+.....             
T Consensus       175 ----------------~~~---------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~-------------  216 (286)
T 3uqc_A          175 ----------------TMP---------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER-------------  216 (286)
T ss_dssp             ----------------CCT---------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB-------------
T ss_pred             ----------------ccC---------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH-------------
Confidence                            222         368899999999999999999999988764221100000             


Q ss_pred             hchhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcC
Q 007177          254 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD  308 (614)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~h  308 (614)
                                 .............+.+++.+.+||.+||+.||++| |++|+++.
T Consensus       217 -----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          217 -----------DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             -----------CTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             -----------HhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence                       00111112223346789999999999999999999 99999873


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.7e-39  Score=373.65  Aligned_cols=246  Identities=26%  Similarity=0.368  Sum_probs=199.5

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECC-CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTH-TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~-tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++|++++.||+|+||.||+|.+.. +|+.||||++... ........+.+|+.+|+.++||||+++++++.........
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            4799999999999999999999976 7899999998753 3344556788999999999999999999998654332223


Q ss_pred             cEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      ..|||||||+| +|.+++..  .+++..++.|+.||+.||.|||++||+||||||+|||++.+ .+||+|||+++.....
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             EEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             eeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence            37999999984 88887754  69999999999999999999999999999999999999886 8999999999865332


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCChhHHHHHHHhhhCCCchhhhhhhh
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR  254 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF~g~~~~~~l~~i~~~~g~p~~~~i~~~~  254 (614)
                             ...+||+.|+|||++.+   .++.++|||||||++|+|++|.+||.+....          +.+..       
T Consensus       235 -------~~~~gt~~y~aPE~~~~---~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------~~~~~-------  287 (681)
T 2pzi_A          235 -------GYLYGTPGFQAPEIVRT---GPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------GLPED-------  287 (681)
T ss_dssp             -------SCCCCCTTTSCTTHHHH---CSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------SCCTT-------
T ss_pred             -------CccCCCccccCHHHHcC---CCCCceehhhhHHHHHHHHhCCCCCcccccc----------ccccc-------
Confidence                   34579999999999875   4588999999999999999999998653210          00000       


Q ss_pred             chhHHHHHHhhcccCCCcccCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHcCccccc
Q 007177          255 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG  313 (614)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~l~dLI~~mL~~DP~~Rpsa~eiL~hp~f~~  313 (614)
                                          ......++.+.+||.+||+.||.+||+..++|.|+|+.-
T Consensus       288 --------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          288 --------------------DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             --------------------CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --------------------ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence                                000113568899999999999999999999999998754


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=3.2e-33  Score=314.74  Aligned_cols=187  Identities=18%  Similarity=0.127  Sum_probs=134.8

Q ss_pred             EeeecCceEEEEEEECCCCcEEEEEEecCccC--------ChHHHHHHHHHHHHHHhc-CCCCcceeeeEecCCCCCCCC
Q 007177           25 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE--------HISDAARILREIKLLRLL-RHPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        25 ~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~--------~~~~~~~i~~Ei~iL~~L-~HpnIv~l~~v~~~~~~~~~~   95 (614)
                      .++.|+.|.+..++....|+.|++|++.+...        .....+.+.+|+++|+++ .|+||+++++++     ++..
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~~  315 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENAQ  315 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECSS
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EECC
Confidence            45677777777777778899999999964321        123456688999999999 699999999998     6778


Q ss_pred             cEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccccCC
Q 007177           96 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND  174 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~  174 (614)
                      .+|||||||+| +|.++|...+.+++.   .|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred             EEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence            89999999996 999999999889875   47899999999999999999999999999999999999999999875433


Q ss_pred             CCCccccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCC
Q 007177          175 TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL  225 (614)
Q Consensus       175 ~~~~~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~p  225 (614)
                      ..   ..+..+||+.|+|||++.+   .+..++|+||+|+++++|.++..+
T Consensus       393 ~~---~~~t~vGTp~YmAPE~l~g---~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          393 CS---WPTNLVQSFFVFVNELFAE---NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -C---CSHHHHHHHHHHHHHHC--------------------CCCCTTHHH
T ss_pred             Cc---cccCceechhhccHHHhCC---CCCCcccccccccchhhhccccch
Confidence            22   2345789999999999976   567789999999999988766533


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94  E-value=1.6e-27  Score=266.70  Aligned_cols=187  Identities=20%  Similarity=0.278  Sum_probs=142.5

Q ss_pred             EEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCC-h-----HHHHHHHHHHHHHHhcCCCCcc--eeeeEecCCCCC
Q 007177           21 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEH-I-----SDAARILREIKLLRLLRHPDIV--EIKHIMLPPSRR   92 (614)
Q Consensus        21 ~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~-~-----~~~~~i~~Ei~iL~~L~HpnIv--~l~~v~~~~~~~   92 (614)
                      ...+.||+|+||.||+|  ...+..+++|+....... .     ...+++.+|+++|+.++||||+  .++++.      
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------  410 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------  410 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE------
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe------
Confidence            45679999999999999  566889999987532221 1     1245688999999999999999  555542      


Q ss_pred             CCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177           93 DFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus        93 ~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                       ....|||||||+ ++|.+++..        +..|+.||+.||.|||++||+||||||+|||++.  .+||+|||+++..
T Consensus       411 -~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          411 -LDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             -TTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             -CCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence             234599999998 699999865        6789999999999999999999999999999998  9999999999876


Q ss_pred             cCCCCCc----cccccccCCccccCcccccccCCCCCCcccchhHHHHHHHHHhCCCCC
Q 007177          172 FNDTPTT----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF  226 (614)
Q Consensus       172 ~~~~~~~----~~~~~~vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLltG~~pF  226 (614)
                      .......    ......+||++|+|||++......|+..+|+||..+-..+.+.++.+|
T Consensus       480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            4321111    012456899999999999764457888999999999888888777665


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90  E-value=3.3e-24  Score=220.48  Aligned_cols=160  Identities=18%  Similarity=0.179  Sum_probs=122.4

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCCh----------------HHHHHHHHHHHHHHhcCCCCcce
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI----------------SDAARILREIKLLRLLRHPDIVE   81 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~----------------~~~~~i~~Ei~iL~~L~HpnIv~   81 (614)
                      ..|.+.+.||+|+||.||+|.+ .+|+.||||+++......                .....+.+|+.+|+.++  | ++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~  165 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA  165 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence            4566779999999999999999 889999999996321110                23566889999999999  4 55


Q ss_pred             eeeEecCCCCCCCCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCCCcE
Q 007177           82 IKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKL  160 (614)
Q Consensus        82 l~~v~~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~~~v  160 (614)
                      +.+++.      .+..|+|||||+| +|.+ +.      ......++.||+.||.|||+.||+||||||+|||++ ++.+
T Consensus       166 v~~~~~------~~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~v  231 (282)
T 1zar_A          166 VPKVYA------WEGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI  231 (282)
T ss_dssp             SCCEEE------EETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEE
T ss_pred             cCeEEe------ccceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcE
Confidence            555542      1346999999985 8887 42      134567999999999999999999999999999999 9999


Q ss_pred             EEeecCccccccCCCCCccccccccCCccccCccccccc--------CCCCCCcccchh
Q 007177          161 KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWS  211 (614)
Q Consensus       161 KL~DFGla~~~~~~~~~~~~~~~~vgt~~Y~APEvl~~~--------~~~y~~~~DIWS  211 (614)
                      ||+|||+|+.                +..++|||++...        ...|+..+|+|.
T Consensus       232 kl~DFG~a~~----------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          232 WIIDFPQSVE----------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             EECCCTTCEE----------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             EEEECCCCeE----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence            9999999863                3347889986430        123455566654


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.83  E-value=1.5e-20  Score=190.37  Aligned_cols=140  Identities=17%  Similarity=0.143  Sum_probs=110.1

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcE--EEEEEecCccCC----------------------hHHHHHHHHHHHHHHh
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEK--VAIKKIHDIFEH----------------------ISDAARILREIKLLRL   73 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~--vAIK~i~~~~~~----------------------~~~~~~i~~Ei~iL~~   73 (614)
                      .-|.+.+.||+|+||.||+|.+..+|+.  ||||+++.....                      ......+.+|+.+|+.
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3488999999999999999998778999  999987542111                      0112357899999999


Q ss_pred             cCCCCc--ceeeeEecCCCCCCCCcEEEEEecCC--C----cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCeEe
Q 007177           74 LRHPDI--VEIKHIMLPPSRRDFKDIYVVFELME--S----DLHQVIKANDDLTREHYQFFLYQLLRALKYIH-TANVYH  144 (614)
Q Consensus        74 L~HpnI--v~l~~v~~~~~~~~~~~~ylV~E~~~--g----~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLH-s~gIvH  144 (614)
                      |.|++|  ..+++.         ...||||||++  |    .|.+.+..   +++..+..++.||+.||.||| +.||+|
T Consensus       127 l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givH  194 (258)
T 1zth_A          127 AKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVH  194 (258)
T ss_dssp             HHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEEC
T ss_pred             HHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            988764  333322         24589999995  2    67766432   345678899999999999999 999999


Q ss_pred             ecCCCCcEEECCCCcEEEeecCccccc
Q 007177          145 RDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus       145 rDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      |||||+|||++.  .++|+|||+|...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            999999999988  8999999999753


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67  E-value=1.2e-16  Score=170.29  Aligned_cols=138  Identities=17%  Similarity=0.177  Sum_probs=99.1

Q ss_pred             CeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccC---------------ChHH---HHH--HHHHHHHHHhcCCCC
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE---------------HISD---AAR--ILREIKLLRLLRHPD   78 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~---------------~~~~---~~~--i~~Ei~iL~~L~Hpn   78 (614)
                      -|.+.+.||.|++|.||+|.+. +|+.||||+++....               ....   ..+  ..+|+..|.+|.+.+
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4999999999999999999874 699999998752110               0000   111  235777777775544


Q ss_pred             cceeeeEecCCCCCCCCcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecCCCCcEEECCC
Q 007177           79 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN  157 (614)
Q Consensus        79 Iv~l~~v~~~~~~~~~~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILi~~~  157 (614)
                      +.-..-+.       ....+|||||++| .|.++.      ..+....++.||+.+|.+||++|||||||||.|||++.+
T Consensus       175 v~vp~p~~-------~~~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          175 FPVPEPIA-------QSRHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             CSCCCEEE-------EETTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred             CCCCeeee-------ccCceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence            32211111       1123799999996 665432      223456788999999999999999999999999999887


Q ss_pred             C----------cEEEeecCcccc
Q 007177          158 C----------KLKICDFGLARV  170 (614)
Q Consensus       158 ~----------~vKL~DFGla~~  170 (614)
                      +          .+.|+||+.+..
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCcccccccccceEEEEeCCccc
Confidence            6          389999998754


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25  E-value=1.9e-11  Score=122.81  Aligned_cols=137  Identities=12%  Similarity=0.121  Sum_probs=106.3

Q ss_pred             CeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCCCCCCcE
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      .|.+...++.|+.+.||++..  .+..+++|.......  .....+.+|+.+|+.|. +..+.++++...     +.+..
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~   85 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFER-----HDGWS   85 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----ETTEE
T ss_pred             cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----cCCce
Confidence            588999999999999999964  368999999864221  11235788999999985 667778888763     34668


Q ss_pred             EEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------
Q 007177           98 YVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHT-------------------------------------  139 (614)
Q Consensus        98 ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs-------------------------------------  139 (614)
                      |+|||+++| +|.+.+     .+......++.++..+|..||+                                     
T Consensus        86 ~lv~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEEECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEEEEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            999999997 676542     1223345788999999999998                                     


Q ss_pred             ----------------------CCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          140 ----------------------ANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       140 ----------------------~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                                            ..++|+|++|.|||++.+..+.|+||+.+.
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                  458999999999999876566799999774


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12  E-value=2.4e-10  Score=113.68  Aligned_cols=134  Identities=15%  Similarity=0.078  Sum_probs=96.4

Q ss_pred             CCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC--cceeeeEecCCCCCCC
Q 007177           17 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD--IVEIKHIMLPPSRRDF   94 (614)
Q Consensus        17 ~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn--Iv~l~~v~~~~~~~~~   94 (614)
                      ...|.+....+.|..+.||++. ..+|..+++|.....     ....+.+|+.+|+.+.+.+  +.+++....     +.
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~   87 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EA   87 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CS
T ss_pred             cCCCceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CC
Confidence            3457765554566779999995 456788999987642     1234678999999886444  455777652     33


Q ss_pred             CcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 007177           95 KDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN--------------------------------  141 (614)
Q Consensus        95 ~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~g--------------------------------  141 (614)
                      +..|+|||+++| +| . .   ....   ...++.++...|..||+..                                
T Consensus        88 ~~~~~v~e~i~G~~l-~-~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (264)
T 1nd4_A           88 GRDWLLLGEVPGQDL-L-S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD  159 (264)
T ss_dssp             SCEEEEEECCSSEET-T-T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred             CCCEEEEEecCCccc-C-c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence            568999999997 55 3 1   1122   2356778888888888754                                


Q ss_pred             --------------------------eEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          142 --------------------------VYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       142 --------------------------IvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                                                ++|+|++|.|||++.++.+.|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                      9999999999999877667799999875


No 258
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.11  E-value=1.3e-10  Score=119.59  Aligned_cols=184  Identities=18%  Similarity=0.270  Sum_probs=120.9

Q ss_pred             EeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCC--cceeeeEecCCCCCCCCcEEE
Q 007177           23 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPD--IVEIKHIMLPPSRRDFKDIYV   99 (614)
Q Consensus        23 ~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-Hpn--Iv~l~~v~~~~~~~~~~~~yl   99 (614)
                      ++.++.|....||++.     ..+++|+...    ......+.+|+.+|+.+. +..  +.+++....  ........|+
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~--~~~~~~~~~~   93 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGM--PSETYQMSFA   93 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECC--CCSSCSCSCE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecC--CCCCCCcceE
Confidence            4569999999999872     5689998653    244567889999999884 333  233333221  1112234589


Q ss_pred             EEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------------
Q 007177          100 VFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHT---------------------------------------  139 (614)
Q Consensus       100 V~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs---------------------------------------  139 (614)
                      |||+++| .|.....  ..++.++...++.|+...|..||+                                       
T Consensus        94 vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           94 GFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             EEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             EEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            9999997 5544332  247888888899999999998886                                       


Q ss_pred             -------------------CCeEeecCCCCcEEECC--CCcEEEeecCccccccCCCCCccccccccCCccc---cCccc
Q 007177          140 -------------------ANVYHRDLKPKNILANA--NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY---RAPEL  195 (614)
Q Consensus       140 -------------------~gIvHrDLKP~NILi~~--~~~vKL~DFGla~~~~~~~~~~~~~~~~vgt~~Y---~APEv  195 (614)
                                         ..++|+|++|.||+++.  +..+.|+||+.+......  .     +......+   ..|+.
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~--~-----Dl~~~~~~~~~~~~~~  244 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD--N-----DFISLMEDDEEYGMEF  244 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT--H-----HHHTTCCTTTSCCHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH--H-----HHHHHHhhccccCHHH
Confidence                               13799999999999988  456889999998653211  0     11111111   23332


Q ss_pred             ccccCCCCC------------CcccchhHHHHHHHHHhCCCCC
Q 007177          196 CGSFFSKYT------------PAIDIWSIGCIFAEVLTGKPLF  226 (614)
Q Consensus       196 l~~~~~~y~------------~~~DIWSLG~Il~eLltG~~pF  226 (614)
                      .......|.            ...+.|++|.+++.+.+|.++|
T Consensus       245 ~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          245 VSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            211101111            1258999999999999998766


No 259
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.04  E-value=7e-10  Score=116.82  Aligned_cols=144  Identities=13%  Similarity=0.211  Sum_probs=104.3

Q ss_pred             eEEEeEeeecCceEEEEEEECCCCcEEEEEEec--CccCChHHHHHHHHHHHHHHhcC--CCCcceeeeEecCCCCCCCC
Q 007177           20 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH--DIFEHISDAARILREIKLLRLLR--HPDIVEIKHIMLPPSRRDFK   95 (614)
Q Consensus        20 Y~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~--~~~~~~~~~~~i~~Ei~iL~~L~--HpnIv~l~~v~~~~~~~~~~   95 (614)
                      ..-++.|+.|.++.||++..  .+..+++|+..  .. ........+.+|+.+|+.|.  +..+.+++......  ...+
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~-~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~--~~~g  114 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKS-KLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIG  114 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEEC--SSCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT--TTTS
T ss_pred             CceEEEcCCcccceEEEEEE--CCceEEEEeCCCCCC-CCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC--CccC
Confidence            33467899999999999864  35688888765  21 11123456789999999997  45577887776432  1224


Q ss_pred             cEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 007177           96 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHT-----------------------------------  139 (614)
Q Consensus        96 ~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs-----------------------------------  139 (614)
                      ..|+|||+++| .+.+.  ....+++.+...++.++...|..||+                                   
T Consensus       115 ~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             SCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             CeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            57999999997 44321  12347888889999999999999997                                   


Q ss_pred             -----------------------CCeEeecCCCCcEEECCCCc--EEEeecCcccc
Q 007177          140 -----------------------ANVYHRDLKPKNILANANCK--LKICDFGLARV  170 (614)
Q Consensus       140 -----------------------~gIvHrDLKP~NILi~~~~~--vKL~DFGla~~  170 (614)
                                             ..++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                   36999999999999997753  69999999864


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.75  E-value=3.3e-08  Score=102.53  Aligned_cols=133  Identities=18%  Similarity=0.245  Sum_probs=98.2

Q ss_pred             CeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCC--C--CcceeeeEecCCCCCCC
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRH--P--DIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~H--p--nIv~l~~v~~~~~~~~~   94 (614)
                      .+.-++.|+.|..+.||++     |..+++|+...    ......+.+|..+|+.|.+  .  .+.+++..         
T Consensus        38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------   99 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------   99 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------
T ss_pred             ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------
Confidence            3445678999999999998     67789997753    2334568899999998876  1  13333332         


Q ss_pred             CcEEEEEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 007177           95 KDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN--------------------------------  141 (614)
Q Consensus        95 ~~~ylV~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~g--------------------------------  141 (614)
                      +..|+||||++| ++.....  ..++.++...++.++...|..||+..                                
T Consensus       100 ~~~~lvme~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (320)
T 3r70_A          100 SDRFNIMKYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK  177 (320)
T ss_dssp             CSSCEEEECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence            234899999997 5543321  34677788888888888888888432                                


Q ss_pred             -------------------------------eEeecCCCCcEEECCCCcEEEeecCccccc
Q 007177          142 -------------------------------VYHRDLKPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus       142 -------------------------------IvHrDLKP~NILi~~~~~vKL~DFGla~~~  171 (614)
                                                     ++|+|++|.|||++.+..+.|+||+.+...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                           399999999999998766799999998653


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.50  E-value=1.5e-06  Score=89.61  Aligned_cols=133  Identities=22%  Similarity=0.220  Sum_probs=91.9

Q ss_pred             EeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCC---CcceeeeEecCCCCCCCCcEEE
Q 007177           23 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHP---DIVEIKHIMLPPSRRDFKDIYV   99 (614)
Q Consensus        23 ~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hp---nIv~l~~v~~~~~~~~~~~~yl   99 (614)
                      ++.++.|....||+.     |..+++|+...    ......+.+|..+|+.|.+.   .+.+++....    ...+..|+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~   90 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFV   90 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEE
Confidence            456899999999988     57788998532    23456788999999999753   2344444432    12345789


Q ss_pred             EEecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 007177          100 VFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA--------------------------------------  140 (614)
Q Consensus       100 V~E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~--------------------------------------  140 (614)
                      |||+++| .|....-  ..++..+...+..++...|..||+.                                      
T Consensus        91 v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~  168 (306)
T 3tdw_A           91 GYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL  168 (306)
T ss_dssp             EEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred             EEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence            9999997 5544221  1345555556666666666665542                                      


Q ss_pred             ----------------------CeEeecCCCCcEEECC---CCc-EEEeecCcccc
Q 007177          141 ----------------------NVYHRDLKPKNILANA---NCK-LKICDFGLARV  170 (614)
Q Consensus       141 ----------------------gIvHrDLKP~NILi~~---~~~-vKL~DFGla~~  170 (614)
                                            .++|+|++|.|||++.   ++. +.|+||+.+..
T Consensus       169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                  3599999999999987   455 48999998864


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41  E-value=2.3e-06  Score=85.71  Aligned_cols=133  Identities=18%  Similarity=0.222  Sum_probs=94.0

Q ss_pred             eEeeecCce-EEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCCCCCCcEEEEE
Q 007177           24 EVIGKGSYG-VVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSRRDFKDIYVVF  101 (614)
Q Consensus        24 ~~LG~G~~G-~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~~~~~~~ylV~  101 (614)
                      +.+..|..| .||+......+..+++|.-..     .....+.+|..+|+.|. +-.+.+++.+.     .+.+..|+||
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~-----~~~~~~~lvm   99 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFI-----RTPDDAWLLT   99 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEEEEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEE-----EECCeEEEEE
Confidence            345556555 689987777788899997653     34567889999999885 32355566655     3345689999


Q ss_pred             ecCCC-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 007177          102 ELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTA----------------------------------------  140 (614)
Q Consensus       102 E~~~g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~----------------------------------------  140 (614)
                      |+++| ++.+.....    ......+..++...|.-||+.                                        
T Consensus       100 e~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (272)
T 4gkh_A          100 TAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP  175 (272)
T ss_dssp             ECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred             EeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence            99997 666554321    223345666677777777742                                        


Q ss_pred             ------------------CeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177          141 ------------------NVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus       141 ------------------gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                                        .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                              179999999999999877777999998753


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.20  E-value=8.3e-06  Score=86.11  Aligned_cols=74  Identities=11%  Similarity=-0.010  Sum_probs=53.3

Q ss_pred             eEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC--cceeeeEecCCCCCCCCcE
Q 007177           20 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD--IVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        20 Y~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn--Iv~l~~v~~~~~~~~~~~~   97 (614)
                      ..-++.|+.|....||+...  ++..+++|.....       ..+.+|..+|+.|....  +.+++......    .+..
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~----~g~~  109 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFS----ESLT  109 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESS----SSCE
T ss_pred             CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCC----CCCe
Confidence            45577899999999999864  5789999987532       14778999999886433  44555544221    2568


Q ss_pred             EEEEecCCC
Q 007177           98 YVVFELMES  106 (614)
Q Consensus        98 ylV~E~~~g  106 (614)
                      |+|||+++|
T Consensus       110 ~lv~e~l~G  118 (362)
T 3ovc_A          110 YCISRRAQG  118 (362)
T ss_dssp             EEEEECCCS
T ss_pred             EEEEEecCC
Confidence            999999986


No 264
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.17  E-value=6.1e-06  Score=87.81  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=48.8

Q ss_pred             EEeEeeecCceEEEEEEECCCCcEEEEEEecCccC--C---hHHHHHHHHHHHHHHhcCC--CC-cceeeeEecCCCCCC
Q 007177           22 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE--H---ISDAARILREIKLLRLLRH--PD-IVEIKHIMLPPSRRD   93 (614)
Q Consensus        22 i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~--~---~~~~~~i~~Ei~iL~~L~H--pn-Iv~l~~v~~~~~~~~   93 (614)
                      -.+.||.|..+.||++.+..++..++||.......  .   .....++.+|..+|+.+..  |. +.+++...       
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------  106 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------  106 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------
Confidence            36789999999999997666678999998653211  0   0123456789999988742  33 33454432       


Q ss_pred             CCcEEEEEecCCC
Q 007177           94 FKDIYVVFELMES  106 (614)
Q Consensus        94 ~~~~ylV~E~~~g  106 (614)
                      ....++|||++++
T Consensus       107 ~~~~~lvmE~l~g  119 (397)
T 2olc_A          107 TEMAVTVMEDLSH  119 (397)
T ss_dssp             TTTTEEEECCCTT
T ss_pred             CCccEEEEEeCCC
Confidence            1224899999986


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.05  E-value=1.3e-05  Score=82.64  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=27.4

Q ss_pred             CCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          140 ANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       140 ~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      ..++|+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            679999999999999888899999999764


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.96  E-value=4.6e-05  Score=77.82  Aligned_cols=75  Identities=12%  Similarity=0.007  Sum_probs=55.2

Q ss_pred             eEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCC---CcceeeeEecCCCCCCCCc
Q 007177           20 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHP---DIVEIKHIMLPPSRRDFKD   96 (614)
Q Consensus        20 Y~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hp---nIv~l~~v~~~~~~~~~~~   96 (614)
                      ..-.+.|+.|.++.||++.. .+|..+++|+.....  ......+.+|+..|+.|.+.   .+.+++..-         .
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~   84 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------D   84 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------T
T ss_pred             ccceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------C
Confidence            44578899999999999975 468899999865321  11234578999999999865   466666542         2


Q ss_pred             EEEEEecCCC
Q 007177           97 IYVVFELMES  106 (614)
Q Consensus        97 ~ylV~E~~~g  106 (614)
                      .|+|||+++|
T Consensus        85 ~~lvme~l~g   94 (288)
T 3d1u_A           85 RTLAMEWVDE   94 (288)
T ss_dssp             TEEEEECCCC
T ss_pred             cEEEEEeccc
Confidence            4899999985


No 267
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.77  E-value=1.3e-05  Score=83.72  Aligned_cols=85  Identities=8%  Similarity=0.138  Sum_probs=52.5

Q ss_pred             eEEEeEe-eecCceEEEEEEECC------CCcEEEEEEecCccC-ChHHHHHHHHHHHHHHhcC-C--CCcceeeeEecC
Q 007177           20 YKIQEVI-GKGSYGVVCSAIDTH------TGEKVAIKKIHDIFE-HISDAARILREIKLLRLLR-H--PDIVEIKHIMLP   88 (614)
Q Consensus        20 Y~i~~~L-G~G~~G~V~~a~d~~------tg~~vAIK~i~~~~~-~~~~~~~i~~Ei~iL~~L~-H--pnIv~l~~v~~~   88 (614)
                      ....+.| +.|....+|++....      ++..+++|....... .......+.+|+.+|+.|. +  -.+.+++.....
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3446778 889999999886431      266889997653210 0001134678888888774 3  346666666532


Q ss_pred             CCCCCCCcEEEEEecCCC
Q 007177           89 PSRRDFKDIYVVFELMES  106 (614)
Q Consensus        89 ~~~~~~~~~ylV~E~~~g  106 (614)
                      ..  ..+..|+|||+++|
T Consensus       102 ~~--~~g~~~~v~e~l~G  117 (357)
T 3ats_A          102 GD--VLGTPFFLMDYVEG  117 (357)
T ss_dssp             ST--TTSSCEEEEECCCC
T ss_pred             CC--ccCCceEEEEecCC
Confidence            21  12446899999986


No 268
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.49  E-value=0.00057  Score=73.19  Aligned_cols=32  Identities=13%  Similarity=0.269  Sum_probs=28.3

Q ss_pred             HhCCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177          138 HTANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus       138 Hs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      +...++|+|++|.|||++.++ ++|+||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            467899999999999998876 99999998864


No 269
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.41  E-value=0.00036  Score=71.11  Aligned_cols=68  Identities=12%  Similarity=0.002  Sum_probs=42.1

Q ss_pred             EeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCc-ceeeeEecCCCCCCCCcEEEEE
Q 007177           23 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDI-VEIKHIMLPPSRRDFKDIYVVF  101 (614)
Q Consensus        23 ~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnI-v~l~~v~~~~~~~~~~~~ylV~  101 (614)
                      ++.|+.|....+|++      ..+++|+.....   .......+|+.+++.+..-.+ .+++...     .  ..-++|+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~~-----~--~~~~~v~   86 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHVD-----P--ATGVMVT   86 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC-----T--TTCCEEE
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEEE-----C--CCCEEEE
Confidence            788999999999999      568888876421   111123468888877753223 3444432     1  1236899


Q ss_pred             ecC-CC
Q 007177          102 ELM-ES  106 (614)
Q Consensus       102 E~~-~g  106 (614)
                      ||+ +|
T Consensus        87 e~i~~g   92 (301)
T 3dxq_A           87 RYIAGA   92 (301)
T ss_dssp             ECCTTC
T ss_pred             eecCCC
Confidence            999 65


No 270
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.20  E-value=0.0023  Score=65.35  Aligned_cols=150  Identities=13%  Similarity=0.101  Sum_probs=80.3

Q ss_pred             ccCCCCCCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC--cceeeeEecCC
Q 007177           12 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD--IVEIKHIMLPP   89 (614)
Q Consensus        12 ~~~~~~~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn--Iv~l~~v~~~~   89 (614)
                      ..|+. +...-++.|+.|....+|++...  +..+++|.....    .....+..|+.+++.|....  +.+++... .+
T Consensus        17 ~~~~~-~~~~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~-~g   88 (322)
T 2ppq_A           17 TQYDV-GSLTSYKGIAEGVENSNFLLHTT--KDPLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPLPLPRK-DG   88 (322)
T ss_dssp             TTBCC-CCEEEEEEECC---EEEEEEEES--SCCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBT-TC
T ss_pred             HhCCC-CcceEeeccCCCcccceEEEEeC--CccEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCcccCCC-CC
Confidence            34554 34445677888998999998643  336889988642    12234557888887774222  22222210 00


Q ss_pred             C--CCCCCcEEEEEecCCCc-H-----H----------HHHHhCCC--------CCHHHHHHH---------------HH
Q 007177           90 S--RRDFKDIYVVFELMESD-L-----H----------QVIKANDD--------LTREHYQFF---------------LY  128 (614)
Q Consensus        90 ~--~~~~~~~ylV~E~~~g~-L-----~----------~~i~~~~~--------lse~~~~~i---------------~~  128 (614)
                      .  ....+..++||++++|. +     .          .+-.....        .........               -.
T Consensus        89 ~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~  168 (322)
T 2ppq_A           89 ELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLRE  168 (322)
T ss_dssp             CSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHH
T ss_pred             CEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHH
Confidence            0  00124578999999862 1     0          01011111        111111110               01


Q ss_pred             HHHHHHHHHHh-------CCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          129 QLLRALKYIHT-------ANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       129 QIl~aL~yLHs-------~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      .+...+.+++.       .+++|+|+.+.|||++.++.+.|+||+.+.
T Consensus       169 ~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          169 EIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            13344555542       369999999999999887666899999775


No 271
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.05  E-value=0.0024  Score=65.78  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=54.0

Q ss_pred             EEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC---CCCcceeeeEecCCCCCCCCcE
Q 007177           21 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLR---HPDIVEIKHIMLPPSRRDFKDI   97 (614)
Q Consensus        21 ~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~---HpnIv~l~~v~~~~~~~~~~~~   97 (614)
                      .-.+.|+.|....+|+...  ++..+++|.....     ....+.+|...|+.|.   ...+.+++....     ..+..
T Consensus        39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~  106 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHS  106 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEE
T ss_pred             eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCce
Confidence            3467899999999999863  5678899976532     3556788999998884   245666666542     23568


Q ss_pred             EEEEecCCC
Q 007177           98 YVVFELMES  106 (614)
Q Consensus        98 ylV~E~~~g  106 (614)
                      |+|||+++|
T Consensus       107 ~lvme~l~G  115 (312)
T 3jr1_A          107 FLLLEALNK  115 (312)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEeccC
Confidence            999999985


No 272
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.99  E-value=0.0066  Score=61.17  Aligned_cols=76  Identities=12%  Similarity=0.016  Sum_probs=51.8

Q ss_pred             CCeEEEeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCC---CcceeeeEecCCCCCCC
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHP---DIVEIKHIMLPPSRRDF   94 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hp---nIv~l~~v~~~~~~~~~   94 (614)
                      .+..-++.+|.|..+.||++.. .+|+.|++|+......  .....+.+|...|+.|..-   .+.+++..-        
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--------   83 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--------   83 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--------
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc--------
Confidence            3566688999999999999964 5789999998653211  1123467899999988522   233444321        


Q ss_pred             CcEEEEEecCC
Q 007177           95 KDIYVVFELME  105 (614)
Q Consensus        95 ~~~ylV~E~~~  105 (614)
                       .-++|||++.
T Consensus        84 -~~~lv~e~l~   93 (288)
T 3f7w_A           84 -DRTLAMEWVD   93 (288)
T ss_dssp             -TTEEEEECCC
T ss_pred             -CceEEEEeec
Confidence             2378999987


No 273
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.96  E-value=0.0069  Score=58.85  Aligned_cols=96  Identities=18%  Similarity=0.134  Sum_probs=65.2

Q ss_pred             cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHH-HhCCeEeecCCCCcEEECCCCcEEEeecCccccccCCCCCccccccc
Q 007177          107 DLHQVIKA-NDDLTREHYQFFLYQLLRALKYI-HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY  184 (614)
Q Consensus       107 ~L~~~i~~-~~~lse~~~~~i~~QIl~aL~yL-Hs~gIvHrDLKP~NILi~~~~~vKL~DFGla~~~~~~~~~~~~~~~~  184 (614)
                      +|.++++. +.+++|++++.+++|.+.+|.-+ +.+.-..+=+.|..|++..+|.|-+.+ ..+.               
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------------   97 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------------   97 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence            79999876 56899999999999999998876 222222334457899999999987774 2111               


Q ss_pred             cCCccccCcccccccCCCCCCcccchhHHHHHHHHHh
Q 007177          185 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT  221 (614)
Q Consensus       185 vgt~~Y~APEvl~~~~~~y~~~~DIWSLG~Il~eLlt  221 (614)
                      .....+.+||...   ...+.+.=|+|||+++|.-+-
T Consensus        98 ~~~~~~~~pe~~~---~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           98 AGEPPPVAGKLGY---SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---------CCSS---SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCCCChhhcc---ccchHHHHHHHHHHHHHHHhh
Confidence            0122356888764   245678889999999999885


No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.94  E-value=0.0029  Score=65.12  Aligned_cols=32  Identities=25%  Similarity=0.424  Sum_probs=27.6

Q ss_pred             hCCeEeecCCCCcEEECCC----CcEEEeecCcccc
Q 007177          139 TANVYHRDLKPKNILANAN----CKLKICDFGLARV  170 (614)
Q Consensus       139 s~gIvHrDLKP~NILi~~~----~~vKL~DFGla~~  170 (614)
                      ...++|+|+.+.|||++.+    +.+.|+||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            3479999999999999875    6799999998864


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75  E-value=0.0087  Score=64.34  Aligned_cols=72  Identities=14%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             EEeEeeecCceEEEEEEECC-------CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCc-ceeeeEecCCCCCC
Q 007177           22 IQEVIGKGSYGVVCSAIDTH-------TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDI-VEIKHIMLPPSRRD   93 (614)
Q Consensus        22 i~~~LG~G~~G~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnI-v~l~~v~~~~~~~~   93 (614)
                      -++.|+.|....||++....       ++..+++|+....  ..  ...+.+|+.+++.|...++ .++++.+     .+
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~--~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET--ESHLVAESVIFTLLSERHLGPKLYGIF-----SG  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC--HHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc--HHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC
Confidence            35678899999999997642       3578999987431  11  1345579999988853333 5566554     11


Q ss_pred             CCcEEEEEecCCC
Q 007177           94 FKDIYVVFELMES  106 (614)
Q Consensus        94 ~~~~ylV~E~~~g  106 (614)
                          .+|+||++|
T Consensus       148 ----g~v~e~l~G  156 (429)
T 1nw1_A          148 ----GRLEEYIPS  156 (429)
T ss_dssp             ----EEEECCCCE
T ss_pred             ----CEEEEEeCC
Confidence                289999975


No 276
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.71  E-value=0.0058  Score=62.52  Aligned_cols=137  Identities=17%  Similarity=0.113  Sum_probs=76.2

Q ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC--cceeeeEecCCC--CCCCCcEEE
Q 007177           24 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD--IVEIKHIMLPPS--RRDFKDIYV   99 (614)
Q Consensus        24 ~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn--Iv~l~~v~~~~~--~~~~~~~yl   99 (614)
                      ..|+ |....||++.. .+|+.+++|.......   ....+..|+.+++.|....  +.+++..  .+.  ....+..++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~  104 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFA  104 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEE
Confidence            4566 77889998743 3466899999863211   2345667888888775222  3333332  111  011345688


Q ss_pred             EEecCCCc-H-----HH------HH---H---hC------CCCCHHHH----------------------HHHHHHHHHH
Q 007177          100 VFELMESD-L-----HQ------VI---K---AN------DDLTREHY----------------------QFFLYQLLRA  133 (614)
Q Consensus       100 V~E~~~g~-L-----~~------~i---~---~~------~~lse~~~----------------------~~i~~QIl~a  133 (614)
                      ||++++|. +     ..      .+   .   ..      ..++....                      ...+.+++..
T Consensus       105 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T 1zyl_A          105 VFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAA  184 (328)
T ss_dssp             EEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHH
Confidence            99999861 1     11      01   0   10      01121111                      1111222222


Q ss_pred             HHHH----HhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          134 LKYI----HTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       134 L~yL----Hs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      +.-+    ....++|+|+++.|||++ + .+.|+||+.+.
T Consensus       185 l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          185 VTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             HHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             HHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            2222    234589999999999998 4 89999999774


No 277
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.70  E-value=0.0033  Score=65.80  Aligned_cols=73  Identities=7%  Similarity=-0.009  Sum_probs=42.5

Q ss_pred             EEeEeeecCceEEEEEEECC--------CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCC-cceeeeEecCCCCC
Q 007177           22 IQEVIGKGSYGVVCSAIDTH--------TGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPD-IVEIKHIMLPPSRR   92 (614)
Q Consensus        22 i~~~LG~G~~G~V~~a~d~~--------tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~Hpn-Iv~l~~v~~~~~~~   92 (614)
                      -++.|+.|....+|++....        .+..+++|+.....   .......+|..+|+.|...+ ..+++...     .
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~  108 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF-----N  108 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec-----C
Confidence            35678889889999997543        13688888765321   11112357888888875333 34555543     1


Q ss_pred             CCCcEEEEEecCCC
Q 007177           93 DFKDIYVVFELMES  106 (614)
Q Consensus        93 ~~~~~ylV~E~~~g  106 (614)
                          -++||||++|
T Consensus       109 ----~~~v~e~i~G  118 (369)
T 3c5i_A          109 ----GGRIEEWLYG  118 (369)
T ss_dssp             ----TEEEEECCCS
T ss_pred             ----CcEEEEEecC
Confidence                1689999986


No 278
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.63  E-value=0.011  Score=62.58  Aligned_cols=138  Identities=12%  Similarity=0.167  Sum_probs=81.0

Q ss_pred             CeEEEeEeeecCceEEEEEEECC-------CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCC
Q 007177           19 RYKIQEVIGKGSYGVVCSAIDTH-------TGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPS   90 (614)
Q Consensus        19 rY~i~~~LG~G~~G~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~   90 (614)
                      ... ++.|..|....+|++....       ++..|++|+.....   .....+.+|..+++.|. +.-..+++..+    
T Consensus        52 ~l~-v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~----  123 (379)
T 3feg_A           52 ELR-VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVF----  123 (379)
T ss_dssp             GCC-CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE----
T ss_pred             ceE-EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEc----
Confidence            344 4678788888999987532       35789999864311   12345568999998885 33335555554    


Q ss_pred             CCCCCcEEEEEecCCC-cH-----------HHH---HH---hC-----CCC--CHHHHHHHHHHHHH-------------
Q 007177           91 RRDFKDIYVVFELMES-DL-----------HQV---IK---AN-----DDL--TREHYQFFLYQLLR-------------  132 (614)
Q Consensus        91 ~~~~~~~ylV~E~~~g-~L-----------~~~---i~---~~-----~~l--se~~~~~i~~QIl~-------------  132 (614)
                       .+    -+||||++| .|           ..+   +.   ..     ...  -...+..|+.++..             
T Consensus       124 -~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~  198 (379)
T 3feg_A          124 -PE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLE  198 (379)
T ss_dssp             -TT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHH
T ss_pred             -CC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhh
Confidence             22    299999985 21           111   11   11     111  23556666655432             


Q ss_pred             ------HHHHHH----h----CCeEeecCCCCcEEECCC----CcEEEeecCccc
Q 007177          133 ------ALKYIH----T----ANVYHRDLKPKNILANAN----CKLKICDFGLAR  169 (614)
Q Consensus       133 ------aL~yLH----s----~gIvHrDLKP~NILi~~~----~~vKL~DFGla~  169 (614)
                            .+..|.    .    ..++|+|+.+.|||++.+    +.+.|+||..+.
T Consensus       199 ~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          199 MYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             hHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence                  233332    2    258999999999999876    789999999874


No 279
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.41  E-value=0.06  Score=58.32  Aligned_cols=72  Identities=19%  Similarity=0.198  Sum_probs=46.0

Q ss_pred             EeEeeecCceEEEEEEECCCCcEEEEEEecCccCChHHHHHHHHHHHHHHhcCCCCc-ceeeeEecCCCCCCCCcEEEEE
Q 007177           23 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDI-VEIKHIMLPPSRRDFKDIYVVF  101 (614)
Q Consensus        23 ~~~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnI-v~l~~v~~~~~~~~~~~~ylV~  101 (614)
                      ++.|+.|-...+|++.....+..+++|+.........   ...+|+.+|+.|...++ .+++..+     .+    .+||
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---dR~~E~~vl~~L~~~gl~P~ll~~~-----~~----G~v~  180 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---NREREKKISCILYNKNIAKKIYVFF-----TN----GRIE  180 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---CHHHHHHHHHHHTTSSSBCCEEEEE-----TT----EEEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---CHHHHHHHHHHHHhcCCCCCEEEEe-----CC----eEEE
Confidence            5678899999999997654457899998753211111   12479999998875444 4566655     11    2599


Q ss_pred             ecCCC
Q 007177          102 ELMES  106 (614)
Q Consensus       102 E~~~g  106 (614)
                      ||++|
T Consensus       181 e~I~G  185 (458)
T 2qg7_A          181 EFMDG  185 (458)
T ss_dssp             ECCCS
T ss_pred             EeeCC
Confidence            99975


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.40  E-value=0.012  Score=60.96  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=27.7

Q ss_pred             CCeEeecCCCCcEEECCCCcEEEeecCcccc
Q 007177          140 ANVYHRDLKPKNILANANCKLKICDFGLARV  170 (614)
Q Consensus       140 ~gIvHrDLKP~NILi~~~~~vKL~DFGla~~  170 (614)
                      ..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4699999999999999888899999988764


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.15  E-value=0.022  Score=60.69  Aligned_cols=142  Identities=16%  Similarity=0.218  Sum_probs=81.2

Q ss_pred             CCeEEEeEeeecCceEEEEEEECC-------CCcEEEEEEecCccCC---------hHHH-------HHHHHHHHHHHhc
Q 007177           18 SRYKIQEVIGKGSYGVVCSAIDTH-------TGEKVAIKKIHDIFEH---------ISDA-------ARILREIKLLRLL   74 (614)
Q Consensus        18 ~rY~i~~~LG~G~~G~V~~a~d~~-------tg~~vAIK~i~~~~~~---------~~~~-------~~i~~Ei~iL~~L   74 (614)
                      +.+. ++.|..|-...+|++....       .+..|.+++.-.....         ..+.       ..+..|..+|+.|
T Consensus        53 ~~i~-v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L  131 (401)
T 3f2s_A           53 DEFH-ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAIL  131 (401)
T ss_dssp             GGCE-EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHH
T ss_pred             hheE-EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHH
Confidence            4444 4567778888999986542       2468888886432110         0111       1233588888888


Q ss_pred             C-CCCcceeeeEecCCCCCCCCcEEEEEecCCC------cHH------HH---HH---hC-----CCCC--HHHHHHHHH
Q 007177           75 R-HPDIVEIKHIMLPPSRRDFKDIYVVFELMES------DLH------QV---IK---AN-----DDLT--REHYQFFLY  128 (614)
Q Consensus        75 ~-HpnIv~l~~v~~~~~~~~~~~~ylV~E~~~g------~L~------~~---i~---~~-----~~ls--e~~~~~i~~  128 (614)
                      . +.-..+++..+     .+    -+|+||++|      ++.      .+   +.   ..     ....  .+.+..++.
T Consensus       132 ~~~Gi~Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~  202 (401)
T 3f2s_A          132 AERSLGPKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLK  202 (401)
T ss_dssp             HHTTSSCCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHH
T ss_pred             HhcCCCCeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHH
Confidence            5 44455666665     21    289999875      121      11   11   11     1111  234444544


Q ss_pred             HHH----------------------HHHH----HHHhC----CeEeecCCCCcEEECCC------CcEEEeecCccc
Q 007177          129 QLL----------------------RALK----YIHTA----NVYHRDLKPKNILANAN------CKLKICDFGLAR  169 (614)
Q Consensus       129 QIl----------------------~aL~----yLHs~----gIvHrDLKP~NILi~~~------~~vKL~DFGla~  169 (614)
                      ++.                      .-+.    +|...    .++|+|+.+.|||++.+      +.+.|+||..|.
T Consensus       203 ~l~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          203 EVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             HHHHCCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             HHHhccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            332                      1122    23332    48999999999999876      789999998774


No 282
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.13  E-value=0.25  Score=52.26  Aligned_cols=29  Identities=31%  Similarity=0.427  Sum_probs=24.7

Q ss_pred             eEeecCCCCcEEE------CCCCcEEEeecCcccc
Q 007177          142 VYHRDLKPKNILA------NANCKLKICDFGLARV  170 (614)
Q Consensus       142 IvHrDLKP~NILi------~~~~~vKL~DFGla~~  170 (614)
                      ++|+|+.+.|||+      +.+..++|+||.+|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999999      4456799999998853


No 283
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.28  E-value=1  Score=47.97  Aligned_cols=73  Identities=10%  Similarity=-0.035  Sum_probs=45.8

Q ss_pred             EEeEeeecCceEEEEEEECC-------CCcEEEEEEecCccCChHHHHHHHHHHHHHHhcC-CCCcceeeeEecCCCCCC
Q 007177           22 IQEVIGKGSYGVVCSAIDTH-------TGEKVAIKKIHDIFEHISDAARILREIKLLRLLR-HPDIVEIKHIMLPPSRRD   93 (614)
Q Consensus        22 i~~~LG~G~~G~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~~Ei~iL~~L~-HpnIv~l~~v~~~~~~~~   93 (614)
                      -++.|..|....+|++....       .+..|++++.......   .....+|..+++.|. +.-..++++.+     . 
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~---~idR~~E~~~l~~L~~~gi~P~l~~~~-----~-  144 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK---FYDSKVELDVFRYLSNINIAPNIIADF-----P-  144 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C---CCCHHHHHHHHHHHHHTTSSCCEEEEE-----T-
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch---hcCHHHHHHHHHHHHhcCCCCCEEEEc-----C-
Confidence            35678888889999997642       1578999986432111   112347888888775 32234454433     1 


Q ss_pred             CCcEEEEEecCCC
Q 007177           94 FKDIYVVFELMES  106 (614)
Q Consensus        94 ~~~~ylV~E~~~g  106 (614)
                         -++||||++|
T Consensus       145 ---~~~I~efI~G  154 (424)
T 3mes_A          145 ---EGRIEEFIDG  154 (424)
T ss_dssp             ---TEEEEECCCS
T ss_pred             ---CCEEEEEeCC
Confidence               1689999986


No 284
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.99  E-value=0.15  Score=55.27  Aligned_cols=62  Identities=15%  Similarity=0.076  Sum_probs=16.7

Q ss_pred             EEeEeeecCceEEEEEEECCCCcEEEE------EEecCccCChHHHHHHHHHHHHHHhcCCCCcceeeeEe
Q 007177           22 IQEVIGKGSYGVVCSAIDTHTGEKVAI------KKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIM   86 (614)
Q Consensus        22 i~~~LG~G~~G~V~~a~d~~tg~~vAI------K~i~~~~~~~~~~~~i~~Ei~iL~~L~HpnIv~l~~v~   86 (614)
                      +.+.||   ||.||++.......+||+      |..+...........+.+|..+++.++|||+++.+.+.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            445566   999999987655568888      66553222333445678899999999999999987765


No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=68.71  E-value=9.7  Score=36.62  Aligned_cols=82  Identities=17%  Similarity=0.083  Sum_probs=58.0

Q ss_pred             CCCCcceeeeEecCCCCCCCCcEEEEEecCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHH-HHHhCCeEeecCCCCcE
Q 007177           75 RHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALK-YIHTANVYHRDLKPKNI  152 (614)
Q Consensus        75 ~HpnIv~l~~v~~~~~~~~~~~~ylV~E~~~-g~L~~~i~~~~~lse~~~~~i~~QIl~aL~-yLHs~gIvHrDLKP~NI  152 (614)
                      .||++  -..+-     .+.+.+.|.++.-+ +.-+..++   .++..+.+.++.+|+.... ++  ..-+|--|.|+||
T Consensus        48 ~~~~f--~~~I~-----~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL  115 (219)
T 4ano_A           48 VDPCI--VRDID-----VSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENL  115 (219)
T ss_dssp             SCSSS--EEEEE-----ECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGE
T ss_pred             cCCCC--CeEEE-----EeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceE
Confidence            57888  23333     34455677777664 32233443   4788888888888887665 44  4458889999999


Q ss_pred             EECCCCcEEEeecCcc
Q 007177          153 LANANCKLKICDFGLA  168 (614)
Q Consensus       153 Li~~~~~vKL~DFGla  168 (614)
                      +++.++.++|.-.|+-
T Consensus       116 ~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A          116 MFNRALEPFFLHVGVK  131 (219)
T ss_dssp             EECTTCCEEESCCEET
T ss_pred             EEeCCCcEEEEEcCCc
Confidence            9999999999988854


No 286
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=64.04  E-value=5  Score=38.52  Aligned_cols=89  Identities=15%  Similarity=0.193  Sum_probs=62.2

Q ss_pred             HHHHHHhcCCCCcceeeeEecCCCCCCCCcEEEEEecCC-C-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Q 007177           67 EIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELME-S-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH  144 (614)
Q Consensus        67 Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~ylV~E~~~-g-~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvH  144 (614)
                      |+.+| ...||+++.. .+.     .+.+.+.|.++.-+ + ++.. |+   .++..+.+.++.+|+....++++  -+|
T Consensus        36 el~LL-~~~~~~Fl~~-~I~-----e~eD~v~~~y~~~~~~~~f~~-ik---~~~~~eKlr~l~ni~~l~~~~~~--r~t  102 (215)
T 4ann_A           36 LMYLL-EQHSPYFIDA-ELT-----ELRDSFQIHYDINDNHTPFDN-IK---SFTKNEKLRYLLNIKNLEEVNRT--RYT  102 (215)
T ss_dssp             GGGGG-GSCCTTBCCE-EEE-----ECSSEEEEEECCCTTSEEGGG-GG---GSCHHHHHHHHHHGGGGGGGGGS--SEE
T ss_pred             HHHHH-hccCCcccce-EEE-----EcccEEEEEEEcCcccCCHHH-HH---hcCHHHHHHHHHHHHHHHHHhcC--ceE
Confidence            44443 2358888866 344     33445666666655 3 3333 33   37888889999999987755543  488


Q ss_pred             ecCCCCcEEECCCCcEEEeecCcc
Q 007177          145 RDLKPKNILANANCKLKICDFGLA  168 (614)
Q Consensus       145 rDLKP~NILi~~~~~vKL~DFGla  168 (614)
                      --|.|+||+++.++.+++.--|+-
T Consensus       103 f~L~P~NL~f~~~~~p~i~~RGik  126 (215)
T 4ann_A          103 FVLAPDELFFTRDGLPIAKTRGLQ  126 (215)
T ss_dssp             CCCSGGGEEECTTSCEEESCCEET
T ss_pred             EEEecceEEEcCCCCEEEEEccCc
Confidence            899999999999999999988754


No 287
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=51.91  E-value=40  Score=36.65  Aligned_cols=133  Identities=17%  Similarity=0.206  Sum_probs=90.5

Q ss_pred             EeeecCceEEEEEEECCCCcEEEEEEecCccCChH--HHHHHHHHHHHHHhcCCCCcceeeeEecCCCCCCCCcEEEEEe
Q 007177           25 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHIS--DAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFE  102 (614)
Q Consensus        25 ~LG~G~~G~V~~a~d~~tg~~vAIK~i~~~~~~~~--~~~~i~~Ei~iL~~L~HpnIv~l~~v~~~~~~~~~~~~ylV~E  102 (614)
                      ++.-|--|.|..+... -+-.++.|+|++.+....  +.+.+..-..+.+  +|.-+-++-+..        ....++++
T Consensus       313 i~APGikGmVM~VFTL-PSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~--------Efsn~~fp  381 (578)
T 3eps_A          313 IEAPGIRGMVMLVFTL-PGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQ--------EFENFVLE  381 (578)
T ss_dssp             EECSSCCCSSEEEEEC-TTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCE--------EEEEEEEE
T ss_pred             EECCCCCceEEEEEcC-CCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhh--------hhhcccCc
Confidence            4677888888888643 467899999998765433  3344444444444  465555544432        11122222


Q ss_pred             c--------------------------------CC---CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeEeecC
Q 007177          103 L--------------------------------ME---SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDL  147 (614)
Q Consensus       103 ~--------------------------------~~---g~L~~~i~~~~~lse~~~~~i~~QIl~aL~yLHs~gIvHrDL  147 (614)
                      .                                ++   ..|-=++..   -+++++...+..--.||+-|-..||.-+|+
T Consensus       382 ~~Rfs~eLL~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~---a~~~~~~~av~eYG~AIKqLAaANIFPGDM  458 (578)
T 3eps_A          382 KRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQ---VEGQQLRDAIEEYGNAIRQLAAANIFPGDM  458 (578)
T ss_dssp             GGGBCHHHHHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHH---CCTHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             hhhCCHHHHHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhh---CCHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence            2                                11   133333332   467788889999999999999999999999


Q ss_pred             CCCcEEECCCCcEEEeecCccccc
Q 007177          148 KPKNILANANCKLKICDFGLARVA  171 (614)
Q Consensus       148 KP~NILi~~~~~vKL~DFGla~~~  171 (614)
                      =..|+=|+..|+|..-|+.-....
T Consensus       459 L~KNFGVTRhgRVVFYDYDEI~yl  482 (578)
T 3eps_A          459 LFKNFGVTRHGRVVFYDYDEICYM  482 (578)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEES
T ss_pred             ccccCCccccceEEEecccceeee
Confidence            999999999999999999866543


No 288
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=39.97  E-value=2.3e+02  Score=31.85  Aligned_cols=45  Identities=24%  Similarity=0.301  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHH--HHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          121 EHYQFFLYQLL--RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       121 ~~~~~i~~QIl--~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      +....|+++++  ..+.|+=..    +|-.++||||+.+|++.=+|||.+-
T Consensus       529 ~ar~nF~~SlA~~Svv~YILGl----GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLLGV----GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHccC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence            34455666554  345565554    4899999999999999999999873


No 289
>3dcg_E Virion infectivity factor; HIV, VIF, AIDS, HOST-virus interaction, membrane, phosphoPro RNA-binding, UBL conjugation pathway; 2.40A {Human immunodeficiency virus type 1}
Probab=34.19  E-value=6.7  Score=26.57  Aligned_cols=10  Identities=50%  Similarity=1.135  Sum_probs=9.0

Q ss_pred             ccccccceec
Q 007177          598 AHRKIGTVQY  607 (614)
Q Consensus       598 ~~r~~~~v~~  607 (614)
                      .|+|||..||
T Consensus         1 ~HnkVGsLQy   10 (39)
T 3dcg_E            1 SHNKVGSLQY   10 (39)
T ss_pred             CCcchhHHHH
Confidence            4999999998


No 290
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=23.64  E-value=7.6e+02  Score=27.14  Aligned_cols=46  Identities=24%  Similarity=0.270  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHH--HHHHHHHhCCeEeecCCCCcEEECCCCcEEEeecCccc
Q 007177          120 REHYQFFLYQLL--RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR  169 (614)
Q Consensus       120 e~~~~~i~~QIl--~aL~yLHs~gIvHrDLKP~NILi~~~~~vKL~DFGla~  169 (614)
                      ++....|+++++  ..+.|+=..|    |=.++||||+.+|++.=+|||.+-
T Consensus       454 ~~a~~nF~~S~A~ySvv~YILGig----DRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYILGVG----DRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCC----CCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhheeeecc----CCCCcceeEcCCCCEeeeehHHhh
Confidence            344566666654  3455665554    889999999999999999999873


Done!