BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007181
(614 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AY19|ADCK4_RAT Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus
norvegicus GN=Adck4 PE=2 SV=1
Length = 528
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/440 (50%), Positives = 296/440 (67%), Gaps = 3/440 (0%)
Query: 158 RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNA 217
R RERKVP++ SRL F GL GL G + E TK+ + P + SPFL++ NA
Sbjct: 79 RSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSL---PGGSLQHEGSSPFLTEANA 135
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+ LC +RGAALKIGQMLSIQD SL+ + + VRQ AD MPRWQ+ +VL+ EL
Sbjct: 136 ERIVQTLCTVRGAALKIGQMLSIQDNSLISPQLQRVFERVRQSADFMPRWQMMKVLEEEL 195
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G DWQ K+ S + P AAASIGQVH+ V KDG +VA+KIQYPGVA+SI+SD+QN+ LL
Sbjct: 196 GKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQNLLALLK 255
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSK 397
+ +P+GL+ + +++ ++EL+ ECDY EAA + F+ +L++ F VP VV++ +
Sbjct: 256 MSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAVVEELCTT 315
Query: 398 RVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEAT 457
RVL EL GIP+D+ LSQ+ RN + +LL L L ELF FRFMQTDPNW+NFLYD ++
Sbjct: 316 RVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASS 375
Query: 458 KTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHV 517
+ L+DFGA+RA+ F D Y+ +V A A+GDR+ ++ S+ L FLTG E DAHV
Sbjct: 376 HKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHV 435
Query: 518 QAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLAC 577
+A I+G PFA G YDF A + I L +LRHRL PPP+E Y+LHRKL+GAFLAC
Sbjct: 436 EAVMILGEPFAASGSYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRKLAGAFLAC 495
Query: 578 IKIGAVVPCRELLLDVYEHY 597
++ A + CR+L D Y Y
Sbjct: 496 ARLHAHIACRDLFQDTYHRY 515
>sp|Q60936|ADCK3_MOUSE Chaperone activity of bc1 complex-like, mitochondrial OS=Mus
musculus GN=Adck3 PE=2 SV=2
Length = 645
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/560 (42%), Positives = 337/560 (60%), Gaps = 29/560 (5%)
Query: 64 EFTNPKPKESIVYFNDSSDVAQSAPSTDKDGAVDQFAAS--VRDVSNDG------GKLDG 115
+F+ P+ + + F+ +S + QS + G +A+S R+ G G+++G
Sbjct: 81 QFSTPQAAGTSLDFSAASSLDQSLSPSHSQGPAPAYASSGPFREAGLPGQATSPMGRVNG 140
Query: 116 ----ENEAKVLESSVEKESLVKEFESIDLGDRVDVDIEREATAKRR------------RP 159
++ L + +++ S ++ S+ G DIE+ AK R R
Sbjct: 141 RLFVDHRDLFLANGIQRRSFHQDQSSV--GGLTAEDIEKARQAKARPESKPHKQMLSERA 198
Query: 160 RERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAI--SPFLSDQNA 217
RERKVP T RL F GL GL G + E K+ + + +S K+A + SPFLS+ NA
Sbjct: 199 RERKVPVTRIGRLANFGGLAVGLGIGALAEVAKKSLR-SENSTGKKAVLDSSPFLSEANA 257
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+ LC++RGAALK+GQMLSIQD++ + + + VRQ AD MP Q+ + L+++L
Sbjct: 258 ERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMTKTLNSDL 317
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G W+ KL F+ P AAASIGQVH A K G +VAMKIQYPGVA SI SD+ N+ +L+
Sbjct: 318 GPHWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLN 377
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSK 397
+N++P+GL+ + + V R EL+ ECDY+ EAA K+FR++L + FYVP +VD+ S
Sbjct: 378 MSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSP 437
Query: 398 RVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEAT 457
VLTTEL+SG P+D+ LSQE RN + +L L L ELF F MQTDPNWSNF YD
Sbjct: 438 HVLTTELISGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQ 497
Query: 458 KTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHV 517
+ L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S + FLTG E M DAH+
Sbjct: 498 HKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHL 557
Query: 518 QAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLAC 577
A I+G FA +DF + T+ I NL ML+HRL PPP+E YSLHRK+ G+FL C
Sbjct: 558 DAILILGEAFASEEPFDFGTQSTTEKIHNLIPVMLKHRLIPPPEETYSLHRKMGGSFLIC 617
Query: 578 IKIGAVVPCRELLLDVYEHY 597
K+ A PC+ + + Y +Y
Sbjct: 618 SKLKARFPCKAMFEEAYSNY 637
>sp|Q29RI0|ADCK3_BOVIN Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus
GN=ADCK3 PE=2 SV=1
Length = 648
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/471 (47%), Positives = 298/471 (63%), Gaps = 13/471 (2%)
Query: 140 LGDRVDVDIEREATAKRR---RP---------RERKVPSTPFSRLLGFAGLGAGLAWGTV 187
+G DIE+ AK R +P RERKVP T RL F GL GL +G +
Sbjct: 170 MGGLTAEDIEKARQAKARPESKPHKQALSEHARERKVPVTRIGRLANFGGLAVGLGFGAL 229
Query: 188 QESTKRIMY-GTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLV 246
E K+ + PS + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ +
Sbjct: 230 AEVAKKSLRPDDPSGKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFI 289
Query: 247 PAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVT 306
+ D VRQ AD MP Q+ + L+ +LG +W+ KL F+ P AAASIGQVH A
Sbjct: 290 NPHLAKIFDRVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARL 349
Query: 307 KDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYE 366
K G +VAMKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+
Sbjct: 350 KGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQ 409
Query: 367 MEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGK 426
EAA +RFR++L + FYVP +VD+ S VLTTELVSG P+D+ LSQE RN +
Sbjct: 410 REAACARRFRELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICY 469
Query: 427 KLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVAC 486
+L L L ELF F+FMQTDPNWSNF YD + L+DFGA R + +SF D Y++++ A
Sbjct: 470 NILVLCLRELFEFQFMQTDPNWSNFFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAA 529
Query: 487 ANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISN 546
AN DRE+ ++ S + FLTG E M DAH+ A I+G FA +DF + T+ I N
Sbjct: 530 ANQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHN 589
Query: 547 LGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 597
L ML+HRL PPP+E YSLHRK+ G+FL C K+ A PC+ + + Y +Y
Sbjct: 590 LIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo
sapiens GN=ADCK3 PE=1 SV=1
Length = 647
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/464 (47%), Positives = 291/464 (62%), Gaps = 13/464 (2%)
Query: 147 DIEREATAKRR------------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRI 194
DIE+ AK R RERKVP T RL F GL GL +G + E K+
Sbjct: 177 DIEKARQAKARPENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKS 236
Query: 195 MYGT-PSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAA 253
+ PS + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 237 LRSEDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKI 296
Query: 254 LDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVA 313
+ VRQ AD MP Q+ + L+ +LG +W+ KL F+ P AAASIGQVH A K G +VA
Sbjct: 297 FERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVA 356
Query: 314 MKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQK 373
MKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+ EAA +
Sbjct: 357 MKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACAR 416
Query: 374 RFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTL 433
+FRD+L FYVP +VD+ S VLTTELVSG P+D+ LSQE RN + +L L L
Sbjct: 417 KFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCL 476
Query: 434 MELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRES 493
ELF F FMQTDPNWSNF YD + L+DFGA R Y +SF D Y++++ A A+ DRE+
Sbjct: 477 RELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRET 536
Query: 494 AIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLR 553
S + FLTG E +M DAH+ A I+G FA +DF + T+ I NL MLR
Sbjct: 537 VRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLR 596
Query: 554 HRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 597
HRL PPP+E YSLHRK+ G+FL C K+ A PC+ + + Y +Y
Sbjct: 597 HRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q566J8|ADCK4_MOUSE Uncharacterized aarF domain-containing protein kinase 4 OS=Mus
musculus GN=Adck4 PE=2 SV=1
Length = 533
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/462 (48%), Positives = 301/462 (65%), Gaps = 11/462 (2%)
Query: 147 DIEREATAKRR---------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYG 197
DI R A+ R R RERKVP++ SRL F GL GL G + E TK+ + G
Sbjct: 59 DIRRAREARLRKAPRPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPG 118
Query: 198 TPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALD 255
+ + + SPFLS+ NAER+ LC +RGAALKIGQMLSIQD S + + +
Sbjct: 119 GSLQHEGVSGLGSSPFLSEANAERIVQTLCTVRGAALKIGQMLSIQDNSFISPQLQRIFE 178
Query: 256 IVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMK 315
VRQ AD MPRWQ+ +VL+ ELG DWQ K+ S + P AAASIGQVH+ + KDG +VA+K
Sbjct: 179 RVRQSADFMPRWQMMRVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVK 238
Query: 316 IQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRF 375
IQYPGVA SI+SD++N+ LL + +P+GL+ + +++ ++EL+ ECDY EAA + F
Sbjct: 239 IQYPGVAQSIQSDVENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTF 298
Query: 376 RDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLME 435
R +L++ F VP VV + + RVL EL GIP+D+ LSQ+ RN + +LL L L E
Sbjct: 299 RKLLADDPFFRVPAVVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRE 358
Query: 436 LFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAI 495
LF FRFMQTDPNW+NFLYD ++ + L+DFGA+RA+ F D Y+ +V A A+GDR+ +
Sbjct: 359 LFEFRFMQTDPNWANFLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVL 418
Query: 496 EMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHR 555
+ S+ L FLTG E DAHV+A I+G PFA G YDF A + I L +LRHR
Sbjct: 419 QKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGPYDFGAGETARRIQGLIPVLLRHR 478
Query: 556 LTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 597
L PPP+E Y+LHRKL+GAFLAC ++ A + CR+L D Y Y
Sbjct: 479 LRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 520
>sp|Q5BJQ0|ADCK3_RAT Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus
norvegicus GN=Adck3 PE=2 SV=1
Length = 649
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/465 (47%), Positives = 296/465 (63%), Gaps = 15/465 (3%)
Query: 147 DIEREATAKRR------------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRI 194
DIE+ AK R R RERKVP T RL F GL GL +G + E K+
Sbjct: 178 DIEKARQAKARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKS 237
Query: 195 MYGTPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILA 252
+ + +S K+A + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 238 LR-SENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLAK 296
Query: 253 ALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQV 312
+ VRQ AD MP Q+ + L+ +LG W+ KL F+ P AAASIGQVH A K G +V
Sbjct: 297 IFERVRQSADFMPLKQMTKTLNNDLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGREV 356
Query: 313 AMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQ 372
AMKIQYPGVA SI SD+ N+ +L+ +N++P+GL+ + + V R EL+ ECDY+ EAA
Sbjct: 357 AMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYA 416
Query: 373 KRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELT 432
K+FR++L + FYVP +VD+ S VLTTEL++G P+D+ LSQE RN + +L L
Sbjct: 417 KKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVLC 476
Query: 433 LMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRE 492
L ELF F MQTDPNWSNF YD + L+DFGA R Y +SF D Y++++ A A+ DRE
Sbjct: 477 LRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDRE 536
Query: 493 SAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATML 552
+ ++ S + FLTG E M DAH+ A I+G FA +DF + T+ I NL ML
Sbjct: 537 AVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPIML 596
Query: 553 RHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 597
+HRL PPP+E YSLHRK+ G+FL C K+ A PC+ + + Y +Y
Sbjct: 597 KHRLIPPPEETYSLHRKMGGSFLICSKLKACFPCKAMFEEAYSNY 641
>sp|Q96D53|ADCK4_HUMAN Uncharacterized aarF domain-containing protein kinase 4 OS=Homo
sapiens GN=ADCK4 PE=1 SV=2
Length = 544
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 307/479 (64%), Gaps = 12/479 (2%)
Query: 147 DIEREATAKRR---------RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYG 197
DI R A+ R R RERKVP++ SRL F GL GL G + E K+ M G
Sbjct: 58 DIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPG 117
Query: 198 TPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALD 255
+ + + SPFLS+ NAER+ LC +RGAALK+GQMLSIQD S + + +
Sbjct: 118 GRLQSEGGSGLDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQLQHIFE 177
Query: 256 IVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMK 315
VRQ AD MPRWQ+ +VL+ ELG DWQ+K+ S + P AAASIGQVH+ + +DG +VA+K
Sbjct: 178 RVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVK 237
Query: 316 IQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRF 375
IQYPG+A SI+SD+QN+ +L + +P GL+ + +++ ++EL+ ECDY EAA + F
Sbjct: 238 IQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNF 297
Query: 376 RDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLME 435
R +L+N F VP VV + + RVL EL G+P+D+ LSQ+ RN + +LL L L E
Sbjct: 298 RQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRE 357
Query: 436 LFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAI 495
LF FRFMQTDPNW+NFLYD ++ + L+DFGA+R + F D Y+ +V A A+GDR+ +
Sbjct: 358 LFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVL 417
Query: 496 EMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHR 555
+ SR L FLTG E DAHV+A I+G PFA G YDF + + I +L +LRHR
Sbjct: 418 QKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHR 477
Query: 556 LTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEESDEFLSSGSISS 614
L PPP+E Y+LHRKL+GAFLAC + A + CR+L D Y Y + D ++GS+ +
Sbjct: 478 LCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPDA-ATAGSLPT 535
>sp|Q18486|COQ8_CAEEL Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans
GN=coq-8 PE=3 SV=2
Length = 755
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/468 (46%), Positives = 297/468 (63%), Gaps = 4/468 (0%)
Query: 139 DLGDRVDVDIEREATAKRRRPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGT 198
+L +V++E R E VP+T RL F L GL G E T+R
Sbjct: 281 ELPKNFEVNLEMGNVHTLTRSNESSVPATRIGRLATFGQLAFGLLGGATAEVTRRTFGIG 340
Query: 199 PSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVR 258
Q++ +PFLS+ NA+R+ LCR+RGAALK+GQMLSIQD S VP +L + VR
Sbjct: 341 KRLQEEGIPKNPFLSEANADRIVATLCRVRGAALKLGQMLSIQDSSTVPPALLQIFERVR 400
Query: 259 QGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQY 318
Q AD MP Q+++ + G DW+ K FD +P A ASIGQVH+AV KDG VA+K+QY
Sbjct: 401 QSADFMPIKQVHRQMKDAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQY 460
Query: 319 PGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDV 378
PGVA+ I+SDI N+ +L + PKG++LD+ + VAR EL +ECDYE EA K+FR++
Sbjct: 461 PGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFREL 520
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFV 438
+++ + YVP V+D+ SS RVLTTELV G P+D + Q R+Y+ K +EL L E+F+
Sbjct: 521 IADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFL 580
Query: 439 FRFMQTDPNWSNFLYDEATKT----INLIDFGAARAYPKSFVDEYLRMVVACANGDRESA 494
+RFMQTDPNWSNF + KT + L+DFGA+RAY K FVD Y+ ++ + +GD++
Sbjct: 581 WRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKI 640
Query: 495 IEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRH 554
IE SR +GFLTG E +M DAHV++ I+G A Y+F ++T I L ML H
Sbjct: 641 IEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMRIQKLIPVMLEH 700
Query: 555 RLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 602
RLT PP+E YSLHRKLSG +L K+ A V C L +++E+Y FGE+
Sbjct: 701 RLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVFGED 748
>sp|Q5RGU1|ADCK3_DANRE Chaperone activity of bc1 complex-like, mitochondrial OS=Danio
rerio GN=adck3 PE=2 SV=1
Length = 602
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 28/469 (5%)
Query: 145 DVDIEREATAKRRRP---------RERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIM 195
D++ REA +P RERKVP T RL F GL GL G + E K+ +
Sbjct: 146 DIEKAREAKQNGSKPHKQMLSERARERKVPVTRLGRLANFGGLAVGLGIGALAEVAKKSL 205
Query: 196 YGTPSSQDKQAAI--SPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAA 253
+ +K+A + SPFLS+ NAER+ LC++RGAALK+GQMLSIQD++ + +
Sbjct: 206 RSEDKNGNKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPQLAKI 265
Query: 254 LDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVA 313
+ VRQ AD MP Q+ + L +LG +W+ KL F+ P AAASIGQ
Sbjct: 266 FERVRQSADFMPIKQMTKALSNDLGPNWRDKLEMFEERPFAAASIGQ------------- 312
Query: 314 MKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQK 373
YPGVA SI SD+ N+ +L +N +P+GL+ + + V R EL+ ECDY EA +
Sbjct: 313 ----YPGVAQSINSDVNNLMTVLSMSNALPEGLFPEHLIDVMRRELALECDYIREAKCAR 368
Query: 374 RFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTL 433
+F+++L + FYVP V+ + SS+ VLTTELV G P+D+ L+QE +N + K +L L L
Sbjct: 369 KFKELLKDHPFFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKNILNLCL 428
Query: 434 MELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRES 493
ELF FR+MQTDPNWSNF YD T + L+DFGA R + +SF D Y+ ++ A A+G+RE
Sbjct: 429 RELFEFRYMQTDPNWSNFFYDPQTHRVALLDFGATRGFDESFTDVYIEIIKAAADGNREG 488
Query: 494 AIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLR 553
++ S + FLTG E+ M++AHV A I+G FA +DF A + T+ I NL ML+
Sbjct: 489 VLKQSIDMKFLTGYESKAMVNAHVDAVMILGEAFASEEPFDFGAQSTTERIHNLIPVMLK 548
Query: 554 HRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 602
RL PPP+E YSLHRK+ G+FL C ++ A + C+++ Y +Y G +
Sbjct: 549 QRLIPPPEETYSLHRKMGGSFLICSRLNAKISCKDMFEAAYSNYWSGRK 597
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc1 PE=2 SV=1
Length = 610
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/438 (45%), Positives = 276/438 (63%), Gaps = 10/438 (2%)
Query: 163 KVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNAERLAY 222
KVPS+ +SRL + GL L+ G + E KR M+G S+D A + L+++N E L
Sbjct: 178 KVPSSQWSRLWHYGGLATSLSVGAIGEKMKR-MWGI--SKDDGALL---LNERNVEILVN 231
Query: 223 ALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQ 282
L +MRGAALK+GQMLS QD L+ + L+ VR GA MP QL QV+ LG +W
Sbjct: 232 KLTQMRGAALKMGQMLSFQDSKLIDPRVSQILERVRDGAHSMPEKQLEQVMVKNLGKNWM 291
Query: 283 SKLTSFDYEPMAAASIGQVHRA-VTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNL 341
+ + FD +PMAAASIGQVHRA + + M+V +K+QYPGV SI+SD+ N+ LL + +
Sbjct: 292 THYSEFDRKPMAAASIGQVHRARLASNHMEVVVKVQYPGVMSSIDSDLNNLAYLLKASRI 351
Query: 342 IPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLT 401
+PKGL+L++++ AR+EL ECDYE EAA +RF +L N F VP V + S V+T
Sbjct: 352 LPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKNDSDFKVPMVFREASGPSVIT 411
Query: 402 TELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTIN 461
E + GI + K + SQ TRN++G L + L E+ + FMQTDPNWSNFLY+ TK I
Sbjct: 412 LEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFMQTDPNWSNFLYNGKTKKIE 470
Query: 462 LIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAF 521
L+DFGA+ Y + F+ +Y R+++A A+ +RE ++S LG+L E+ M+DAH+ + F
Sbjct: 471 LLDFGASIEYDEKFIKKYCRLLLAAAHRNREKCKKLSVELGYLNNHESAQMIDAHINSIF 530
Query: 522 IVGMPFA--KPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIK 579
+ PFA P YDF IT + ML RL PPP+E YSLHR+LSG FL C K
Sbjct: 531 TLAEPFAFDAPDVYDFGDQTITARVKQQIPVMLDLRLQPPPEETYSLHRRLSGHFLLCAK 590
Query: 580 IGAVVPCRELLLDVYEHY 597
+GA V C+EL + +HY
Sbjct: 591 LGAKVRCKELFSGMLKHY 608
>sp|Q54IH6|ABKA_DICDI Probable serine/threonine-protein kinase abkA OS=Dictyostelium
discoideum GN=abkA PE=3 SV=1
Length = 565
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 276/448 (61%), Gaps = 23/448 (5%)
Query: 158 RPRERKVPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNA 217
+ + K+PS+ SR F L G+ G + E TKR + + SS ++ S +D NA
Sbjct: 102 KSKGHKIPSSQTSRFWEFTKLAVGVGAGFLGEKTKRTIDSSSSSSSPSSSYSAIFTDTNA 161
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ER+A + RMRGAALKIGQ+LSIQDES +P + LD VR+ A+ +P QL + EL
Sbjct: 162 ERMAESFSRMRGAALKIGQVLSIQDESFLPPKFVEILDRVRKNANPIPLEQLYNTMSNEL 221
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
G +W+SK F +P+AAASIGQVHRA+T DG +VA+K+QYPGVADSI SDI+N+ LL
Sbjct: 222 GENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLK 281
Query: 338 YTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNA------------KGF 385
++P+ Y++ +++ AR EL E DY EA+NQ +F+ +L ++ K
Sbjct: 282 M--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGTNGSFKYLKDL 339
Query: 386 YVPYVVDDTSSKRVLTTELVSGIPIDKVA--QLSQETRNYVGKKLLELTLMELFVFRFMQ 443
YVP V+ + ++KR+LTTE V G IDK+ +QETR+++ K +L L L ELF F FMQ
Sbjct: 340 YVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLAELFEFNFMQ 399
Query: 444 TDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGF 503
DPNW+NF+ D K INL+DFGA R Y F+ YL+ + N D +E S +LG+
Sbjct: 400 VDPNWTNFVVDFENKRINLLDFGACRNYKSEFLFNYLKSIEGGVNRDINQILEYSLKLGY 459
Query: 504 LTGMENVIMLDAHVQAAFIVGMPFAK-------PGGYDFCANNITQSISNLGATMLRHRL 556
LTG EN M DA ++ I+ PF+K Y F I + IS L TML++RL
Sbjct: 460 LTGDENKQMNDAQAKSILILSEPFSKLYYKENNLKTYPFNEKQIAKRISQLIPTMLKNRL 519
Query: 557 TPPPDEAYSLHRKLSGAFLACIKIGAVV 584
PPP+E YSLHRKLSG +L C K+ + +
Sbjct: 520 KPPPEETYSLHRKLSGCYLVCSKLKSNI 547
>sp|P27697|COQ8_YEAST Probable serine/threonine-protein kinase COQ8, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ8 PE=1 SV=1
Length = 501
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 273/457 (59%), Gaps = 14/457 (3%)
Query: 149 EREATAKRRRPRERK-------VPSTPFSRLLGFAGLGAGLAWGTVQESTKRIMYGTPSS 201
E E +R+ E+K VP++ SRL + L AG+ + + G +
Sbjct: 48 EGEENVERKHEEEKKDTLKSSSVPTSRISRLFHYGSLAAGVGMNAAAKGISEVAKGNSPT 107
Query: 202 QDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
S LSD N +R+ +MRG ALKIGQ+LS QDE ++P + L V+ A
Sbjct: 108 WK-----SLILSDSNIDRITNKFSKMRGVALKIGQLLSFQDEKVLPKELYEILSRVQNSA 162
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ MP+ QL +V+ ELG++W++K + FD PMAAASIGQVH A G +V +KIQYPGV
Sbjct: 163 NHMPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGV 222
Query: 322 ADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSN 381
+SI+SD+ ++ +LL ++L+PKGL+LD + AR EL ECDY EA ++F +L +
Sbjct: 223 KESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKD 282
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRF 441
F VP+V + ++ ++T + G I K+ + SQET+N++ + ++ L L E+ F++
Sbjct: 283 DPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKY 342
Query: 442 MQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRL 501
MQTDPNW+NFLY+ TK I L+DFGA+R + + F+ +Y +++ DR+ A EMS +L
Sbjct: 343 MQTDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDRKGAYEMSVQL 402
Query: 502 GFLTGMENVIMLDAHVQAAFIVGMPFAK--PGGYDFCANNITQSISNLGATMLRHRLTPP 559
G+LTG+E+ M DAHV + +G PF +DF ++ I ML RL PP
Sbjct: 403 GYLTGLESQSMKDAHVDSVLTLGEPFRGDVDKSFDFKDQTVSDRIRGNIGLMLNERLCPP 462
Query: 560 PDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEH 596
P+E YSLHRK SG FL C ++GA V C +L +++ +
Sbjct: 463 PEETYSLHRKFSGIFLLCARMGASVHCAKLFKEIFAY 499
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 7/294 (2%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++AERL C RG +K+GQ L D L+P L ++ A R ++ QV+
Sbjct: 74 RSAERLRELCCANRGTFIKVGQHLGALD-YLLPEEYTRTLKVLHSQAPQSTRQEIEQVIR 132
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
+LG + + SF+ P+ AAS+ QVH+AV +DG VA+KIQ+P V DI +++
Sbjct: 133 EDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEV 192
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
LL I ++ A++ L E D+ E N ++ +L N + VP + +
Sbjct: 193 LLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEFLKVPRIYWEL 252
Query: 395 SSKRVLTTELVSGIPIDKVAQLSQE--TRNYVGKKLLELTLMELFVFRFMQTDPNWSNFL 452
S++RVL E + G ++ A + + N + + L +L +FV F+ DP+ N L
Sbjct: 253 STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVL 312
Query: 453 Y----DEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLG 502
D I L+D G + +SF +Y R+ +A D + + SRRLG
Sbjct: 313 VKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKADMKRVQKYSRRLG 366
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 157/329 (47%), Gaps = 12/329 (3%)
Query: 180 AGLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLS 239
A + W + E + + GT ++ +I + ++A RL C RG +K+GQ L
Sbjct: 47 AAITWDYLTE-LRHVKAGT----EEYESIKSQVHFRSAHRLLDLCCANRGTFIKVGQHLG 101
Query: 240 IQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIG 299
E LVP L ++ A P + QV+ +LG + F+ +P+ AAS+
Sbjct: 102 AL-EYLVPPEYTKTLSVLHSQAPCTPFPDVVQVIREDLGKEISEVFVEFEEKPLGAASLA 160
Query: 300 QVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREEL 359
QVHRAV +DG +VA+K+Q+P V DI +++LL I ++ A++ L
Sbjct: 161 QVHRAVLQDGRKVAVKVQHPKVQAQSARDILLMEVLLHAVKKIFPQFEFMWLIEEAKKNL 220
Query: 360 SRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPID--KVAQLS 417
E D+E E N ++ ++S+ +P + + S+KRVL E + G ++ + + +
Sbjct: 221 PLELDFENEGRNAEKMSAIVSSFSFLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRN 280
Query: 418 QETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKT----INLIDFGAARAYPK 473
Q N V + L +L +FV F+ DP+ N L + +T I L+D G + +
Sbjct: 281 QIDINQVARALGQLYSEMIFVHGFVHCDPHPGNVLVRQNPETLVPEIILLDHGLYQVLTE 340
Query: 474 SFVDEYLRMVVACANGDRESAIEMSRRLG 502
SF +Y + A D + S+RLG
Sbjct: 341 SFRLDYCSLWQALIAADMQQIRIYSQRLG 369
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 154/324 (47%), Gaps = 22/324 (6%)
Query: 193 RIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAA-LKIGQMLSIQDESLVPAPIL 251
+I+ TP + S ++A+ L LC G +K GQ ++ + ++P
Sbjct: 224 KILSYTPEKSSEYLEKSKICHQESAD-LILDLCLTNGGLYIKAGQYIASLNH-ILPIQYT 281
Query: 252 AALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQ 311
L +++ A +++ V +LG+ + FD P+AAAS+ QVHRA+TK+G +
Sbjct: 282 KTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEE 341
Query: 312 VAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAAN 371
VA+K+QY + + + DI +LL N+ + + + L +E D+ EA N
Sbjct: 342 VAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFEFNWMAEEMKNVLIKELDFSQEADN 401
Query: 372 QKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQ-----LSQETRNYVGK 426
+R LS+ Y+P V SSKR+LTTE + G I+ V LS++T V +
Sbjct: 402 AERAAQDLSSNNNAYIPKVFRPYSSKRILTTEFIHGCKINNVQAIRSMGLSEKT---VSQ 458
Query: 427 KLLELTLMELFVFRFMQTDPNWSNFLYDEATKTIN-----LIDFGAARAYPKSFVDEYLR 481
+ +E+ ++F+ F+ DP+ N L + N L+D G R Y + F +
Sbjct: 459 RFMEIMCEQIFIHAFVHVDPHAGNVLVRQHPNHPNQPQIVLLDHGLYREYDEEFRLNFCN 518
Query: 482 M---VVACANGDRESAIEMSRRLG 502
+ +V C N E + S+ LG
Sbjct: 519 LYKNLVLCNNKKVE---KYSKALG 539
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Query: 215 QNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLD 274
++A RL C RG +K+GQ L+ E LVP L ++ A P + QV+
Sbjct: 77 RSAHRLLDLCCFNRGTFIKVGQHLAAL-EYLVPPEYTKTLSVLHSQAPCTPFTDVVQVIR 135
Query: 275 AELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKI 334
+LG + F+ P+ AAS+ QVHRAV +DG +VA+K+Q+P V DI +++
Sbjct: 136 EDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILIMEV 195
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
LL I ++ A++ L E D++ E N ++ ++S+ +P + +
Sbjct: 196 LLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIPRIYWEL 255
Query: 395 SSKRVLTTELVSGIPID--KVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFL 452
S+KRVL E + G ++ + + +Q N V L +L +FV F+ DP+ N L
Sbjct: 256 STKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHPGNVL 315
Query: 453 Y----DEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLG 502
+ I L+D G + +SF +Y + A D+E S+RLG
Sbjct: 316 VRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAADKERIRIYSQRLG 369
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 15/305 (4%)
Query: 213 SDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQV 272
+ ++ E L A + +KIGQ+LS + + L+P P + L ++ + +
Sbjct: 29 NKKSPENLRKAFEELGPTFIKIGQILSTRPD-LLPLPYIKELSKLQNNVPPENFIDIENL 87
Query: 273 LDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNV 332
EL S + FD P+ +ASI QVH A+ KDG V +KIQ PG+A+ +++D+ +
Sbjct: 88 FFEELSSTIDNTFLYFDKTPIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSII 147
Query: 333 KILLDYTNLIPKGLYLDSAM--KVAREEL----SRECDYEMEAANQKRFRDVLSNAKGFY 386
K LL+ T K + D+ + K A +EL ++E D+ E N K+F+ + + K
Sbjct: 148 KKLLNIT----KTKFTDALIDPKEAIDELFISTTQELDFINEINNIKKFKKLNEDVKFVR 203
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQT 444
PY +D +++++ E + GI ID + +L E + +GKKL ++F F
Sbjct: 204 TPYTIDKLCTEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHG 263
Query: 445 DPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFL 504
DP+ N L E I IDFG KS ++A A D I + +G
Sbjct: 264 DPHPGNLLIRE--NHICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVK 321
Query: 505 TGMEN 509
G N
Sbjct: 322 KGYVN 326
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 21/324 (6%)
Query: 190 STKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAP 249
S + + YG+ +++ + ++A RL C RG +K+GQ L D L+P
Sbjct: 56 SLRSVPYGSEEYLQRRSQVHL----RSARRLFELCCANRGTFIKVGQHLGALD-YLLPEE 110
Query: 250 ILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDG 309
+ L ++ A ++ QV+ +LG + SFD P+ AAS+ QVH+AV DG
Sbjct: 111 YTSTLKVLHSQAPQSSMQEVRQVIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDG 170
Query: 310 MQVAMKIQYPGVADSIESDIQNVKIL-LDYTNLIPKGLYLDSAMKVAREELSRECDYEME 368
VA+K+Q+P V DI +++L L L P ++ + A++ L E D+ E
Sbjct: 171 RTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPDFEFM-WLVDEAKKNLPLELDFLNE 229
Query: 369 AANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQ------ETRN 422
N ++ +L + VP + + S+KRVL E V G ++ A + + E
Sbjct: 230 GRNAEKVAHMLRHFDFLKVPQIHWELSTKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISC 289
Query: 423 YVGKKLLELTLMELFVFRFMQTDPNWSNFLY----DEATKTINLIDFGAARAYPKSFVDE 478
++GK E+ +FV F+ DP+ N L D I L+D G + + F +
Sbjct: 290 HLGKMYSEM----IFVNGFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFRLD 345
Query: 479 YLRMVVACANGDRESAIEMSRRLG 502
Y + + D + + S+RLG
Sbjct: 346 YCHLWQSLIWTDMDGLKQYSQRLG 369
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 20/327 (6%)
Query: 190 STKRIMYGTPSSQDKQAAISP-FLSDQ--NAERLAYALCRMRGAALKIGQMLSIQDESLV 246
S K + YG+ ++ P FL +A RL C RG +K+GQ L D L+
Sbjct: 56 SLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALD-YLL 114
Query: 247 PAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVT 306
P + L ++ A ++ QV+ +LG + SFD P+ AS+ QVH+AV
Sbjct: 115 PEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVL 174
Query: 307 KDGMQVAMKIQYPGVADSIESDIQNVKIL-LDYTNLIPKGLYLDSAMKVAREELSRECDY 365
DG VA+K+Q+P V DI +++L L L P+ ++ + A++ L E D+
Sbjct: 175 HDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFM-WLVDEAKKNLPLELDF 233
Query: 366 EMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQ------E 419
E N ++ +L + VP + D S++RVL E V G ++ + + E
Sbjct: 234 LNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNE 293
Query: 420 TRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKT----INLIDFGAARAYPKSF 475
++GK E+ +FV F+ DP+ N L + T I L+D G + + F
Sbjct: 294 ISRHLGKMYSEM----IFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEF 349
Query: 476 VDEYLRMVVACANGDRESAIEMSRRLG 502
Y + + D + E S+RLG
Sbjct: 350 RLNYCHLWQSLIWTDMKRVKEYSQRLG 376
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 144/297 (48%), Gaps = 27/297 (9%)
Query: 224 LC-RMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQ 282
LC + +G +K+ Q+++ D ++P + +L I + A + ++ ++ E G
Sbjct: 251 LCYQNKGIFIKVAQIIASLDH-ILPQEYIKSLSIFQDHAPFVTFEEVEKLFKIETGKHPD 309
Query: 283 SKLTSFDYEPMAAASIGQVHRAVTK----DGMQVAMKIQYPGVADSIESDIQNVKILLDY 338
F+ P+ +AS+ QVH+A K + ++VA+K+QYPG+ + + D+ ++ +L Y
Sbjct: 310 DMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSLDNVLTY 369
Query: 339 TNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKR 398
L + A LS+E D+ EA N ++ + + + +P V + ++KR
Sbjct: 370 ITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQQLSIPKVYWNHTTKR 429
Query: 399 VLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLM-------ELFVFRFMQTDPNWSNF 451
+LT E + G+ ID ++E + +G L EL + ++FV F+ +DP+ N
Sbjct: 430 ILTMEFIHGVRID-----NREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHSDPHPGNL 484
Query: 452 LYDEATKTIN------LIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLG 502
L KT N L+D G + ++ ++ + + GD +++ + RLG
Sbjct: 485 L---VRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGDAKTSEFYAERLG 538
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 143/309 (46%), Gaps = 9/309 (2%)
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
ERL A + +K GQ+LS + + LVPA I+ L+ ++ + + +++++ L
Sbjct: 50 ERLRRACEDLGPIFVKFGQLLSTRPD-LVPADIVLELNHLQDNVTPFSKGEFQRIVESSL 108
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQ---NVKI 334
G+ SF+ EP+A+AS+ QVH AV KDG +V +K+ PG+ I DI V
Sbjct: 109 GASVAEVFASFNIEPLASASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQDIALLLRVAR 168
Query: 335 LLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
++ L K L+ ++ R + E D + EAAN + R N+ YVP V +
Sbjct: 169 WVENNTLDGKRLHPVEIVEDYRTTIFDELDLQREAANGSQLRRNFLNSPLLYVPEVYWEY 228
Query: 395 SSKRVLTTELVSGIPIDKVAQLS--QETRNYVGKKLLELTLMELFVFRFMQTDPNWSN-F 451
+ VL E + GIP+ +A L+ Q + ++ +E+ ++F F D + N F
Sbjct: 229 TRTNVLVMERIYGIPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFHADMHPGNIF 288
Query: 452 LYDEATKTINLIDFGAARAYPKSFVDEYL--RMVVACANGDRESAIEMSRRLGFLTGMEN 509
+ E I A + D+Y R ++A D E+ G++
Sbjct: 289 VAHEHPSAPQYIAVDMAIVGSLTRADQYYLARNLLAMFRRDYRQVAELHVESGWVPSHVR 348
Query: 510 VIMLDAHVQ 518
V L+A V+
Sbjct: 349 VEELEAAVR 357
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 190 STKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAP 249
T ++ G + K I + A+ L R G +K+GQ L + L+P
Sbjct: 104 CTNVVLRGVEENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKLGQGLCSFNH-LLPTE 162
Query: 250 ILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDG 309
+ L ++ A +++++ + + FDYEPMAAAS+ QVHRA DG
Sbjct: 163 YIQTLRVLEDKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDG 222
Query: 310 MQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEA 369
VA+K+QY + D + D+Q +++LL L+ ++ + L +E D+E E
Sbjct: 223 TDVAVKVQYIDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEG 282
Query: 370 ANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKK 427
N +R L + +P V D SSKRVLT + +G ++ + + + V KK
Sbjct: 283 RNAERCAQELKHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKK 342
Query: 428 LLELTLMELFVFRFMQTDPNWSNFL 452
L++ ++F F+ +DP+ N L
Sbjct: 343 LIQTFAEQIFHTGFIHSDPHPGNVL 367
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 159/356 (44%), Gaps = 27/356 (7%)
Query: 224 LCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQS 283
R+ +K+GQ LS + + L P L L ++ P + ++ EL ++
Sbjct: 154 FTRLGPTFVKLGQGLSTRPD-LCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLET 212
Query: 284 KLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQNV----KILLDY 338
+S EP+AAAS+GQV++A + G VA+K+Q PG+ ++I D + K++ Y
Sbjct: 213 IFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVGKLINKY 272
Query: 339 TNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKR 398
+ I + + + + +E +Y EA N +RF+ + ++ VP + D +S++
Sbjct: 273 VDFITTDVL--TLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRK 330
Query: 399 VLTTELVSGIPIDKVAQLSQETRNYVGKKLLEL-------TLMELFVFRFMQTDPNWSNF 451
VLT E V G +++ QL+ E++ G K+L+L +L +L + F DP+ N
Sbjct: 331 VLTMEWVEGTKLNE--QLAIESQ---GLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNL 385
Query: 452 LYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVI 511
L K + +DFG P+ + VV N D E+ L FL+ +V
Sbjct: 386 LATPDGK-LAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVT 444
Query: 512 MLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLH 567
+ ++ F + Y N + LGA ++ PP A L
Sbjct: 445 PIIPALRDFFDDAL------NYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILR 494
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 288 FDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLY 347
FDY+P+AAAS+ QVHRA DG VA+K+QY + D + DI +++LL ++
Sbjct: 201 FDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFG 260
Query: 348 LDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSG 407
++ + L++E D+E E N +R L++ VP V D SSKRVLT + +G
Sbjct: 261 FSWVLQDLKGTLAQELDFENEGRNAERCARELAHFPYVVVPRVHWDKSSKRVLTADFCAG 320
Query: 408 IPIDKVAQLSQE--TRNYVGKKLLELTLMELFVFRFMQTDPNWSNFL 452
++ V + + + + +KL++ ++F F+ +DP+ N L
Sbjct: 321 CKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIHSDPHPGNVL 367
>sp|B2VG47|UBIB_ERWT9 Probable ubiquinone biosynthesis protein UbiB OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=ubiB PE=3
SV=1
Length = 545
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 13/236 (5%)
Query: 219 RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELG 278
RL AL ++ +K GQM+S + + L P I L +++ Q ++++ LG
Sbjct: 56 RLRLALEQLGPVWIKFGQMMSTRRD-LFPPHIADQLAMLQDKVAPFDGAQAKKLIEHSLG 114
Query: 279 SDWQSKLTSFDYEPMAAASIGQVHRAVTKD-GMQVAMKIQYPGVADSIESDIQNVKILLD 337
+ +S+ FD P+A+ASI QVH A K+ G +V +K+ P + I++D++ + L
Sbjct: 115 APVESQFDDFDIVPLASASIAQVHTATLKENGREVVIKVIRPDILPVIKADMKLIYRLAR 174
Query: 338 YT-NLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDT 394
+ L+P G L VA E L E + EAAN + R ++ + YVP + D
Sbjct: 175 WVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNFADGQMLYVPEIYSDY 234
Query: 395 SSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF---VFR--FMQTD 445
S+ +L E + GIPI VA L Q V KLL +++F VFR F D
Sbjct: 235 CSENMLVMERIYGIPISDVATLEQHG---VNMKLLAERGVQVFFTQVFRDSFFHAD 287
>sp|A1RP80|UBIB_SHESW Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain W3-18-1) GN=ubiB PE=3 SV=1
Length = 549
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 21/246 (8%)
Query: 213 SDQNAERLAYALCRMRGAALKIGQMLS-----IQDESLVPAPILAALDIVRQGADVMPRW 267
S ERL A+ + +K+GQMLS + DE + +L D V V+ R
Sbjct: 50 SKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQ--DKVPPFDGVLAR- 106
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIE 326
+ ++AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I
Sbjct: 107 ---KAIEAELKASIESLFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIL 163
Query: 327 SDIQ---NVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSN 381
+D+Q LL+Y + +G L A + R + E + ++EA N + R+ N
Sbjct: 164 ADLQLMSQTANLLEY--FLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAIKLRNNFLN 221
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVF 439
+ YVPYV ++ R++ E + GIP+ +A L + N+ + ++ +EL ++F
Sbjct: 222 SDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRD 281
Query: 440 RFMQTD 445
F D
Sbjct: 282 NFFHAD 287
>sp|A4Y2Q3|UBIB_SHEPC Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiB PE=3
SV=1
Length = 549
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 21/246 (8%)
Query: 213 SDQNAERLAYALCRMRGAALKIGQMLS-----IQDESLVPAPILAALDIVRQGADVMPRW 267
S ERL A+ + +K+GQMLS + DE + +L D V V+ R
Sbjct: 50 SKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWAIELAMLQ--DKVPPFDGVLAR- 106
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIE 326
+ ++AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I
Sbjct: 107 ---KAIEAELKASIESLFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIL 163
Query: 327 SDIQ---NVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSN 381
+D+Q LL+Y + +G L A + R + E + ++EA N + R+ N
Sbjct: 164 ADLQLMSQTANLLEY--FLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAIKLRNNFLN 221
Query: 382 AKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVF 439
+ YVPYV ++ R++ E + GIP+ +A L + N+ + ++ +EL ++F
Sbjct: 222 SDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRD 281
Query: 440 RFMQTD 445
F D
Sbjct: 282 NFFHAD 287
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 15/262 (5%)
Query: 216 NAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDA 275
+RL AL + +K GQ+LS + + L+P + +L ++ P Q +++
Sbjct: 51 RGDRLRLALEELGPVFVKFGQILSTRRD-LLPDDMAESLKQLQDRVPPFPSEQARGIIEK 109
Query: 276 ELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKIL 335
LG+ F +PMA+AS+ QVH A +G +V +K+ PG+ I D+ + ++
Sbjct: 110 SLGAPVSELFAEFSPDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDLGLMYLM 169
Query: 336 LDYTNLIPK----GLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPY 389
L+ K G L VA + + E D + EAAN + R N+ Y+P+
Sbjct: 170 ---AGLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYIPF 226
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQTDPN 447
+ D + K VL E + GIPI V L + N + +K +E+ ++F F D +
Sbjct: 227 IDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMH 286
Query: 448 WSNFLYD---EATKTINLIDFG 466
N D A IDFG
Sbjct: 287 PGNIFVDVSNPADPKYIAIDFG 308
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 18/317 (5%)
Query: 212 LSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQ 271
L + A+RL + + G +K+GQ++++Q +L P A + A + +L
Sbjct: 105 LHQRVAQRLFKTIYKNGGLYIKMGQIIAMQSNNL-PEAYGKAFQGMFDNAPQVEWEELQD 163
Query: 272 VLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQN 331
+ + G + S + A+ASI QVHRAV G +VA+KIQ P VA + D+
Sbjct: 164 IFKEQYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLV 223
Query: 332 VKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNA----KGFYV 387
K ++ + + L + E L E D+ EA N + R+ + Y+
Sbjct: 224 YKYMMYVYDKWIFHIPLYFTVDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYI 283
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQE--TRNYVGKKLLELTLMELFVFRFMQTD 445
P V + S KRV+ TE GIP+ LS+ ++ + L ++F + + D
Sbjct: 284 PKVYKEISGKRVMVTEWADGIPLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCD 343
Query: 446 PNWSNFLYDE----ATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRL 501
P+ N L + +T+ ++D G + F E+ + A + D++S +++
Sbjct: 344 PHPGNILVRKNQAGLCQTV-ILDHGLYVFESEKFRKEFALLFTAAYSLDKKSILQVMDAW 402
Query: 502 G------FLTGMENVIM 512
G F M N+ M
Sbjct: 403 GIGQPELFANRMLNIPM 419
>sp|P96936|Y647_MYCTU Uncharacterized protein Rv0647c/MT0675 OS=Mycobacterium
tuberculosis GN=Rv0647c PE=3 SV=1
Length = 488
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 268 QLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIES 327
+++++ ELG + SF+ EP A+ASI QVH A + G +V +KIQ PG+ + +
Sbjct: 143 EVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRSGEEVVVKIQRPGIRRRVAA 202
Query: 328 DIQNVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNA--- 382
D+Q +K L G L + VA + L+ E D+ +EA + + + L +
Sbjct: 203 DLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAEELDFRLEAQSMEAWVSHLHASPLG 262
Query: 383 KGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELF----V 438
K VP V D +++RVLT E V GI ID A + + + G +L++ L +F
Sbjct: 263 KNIRVPQVHWDFTTERVLTMERVHGIRIDNAAAIRKA--GFDGVELVKALLFSVFEGGLR 320
Query: 439 FRFMQTDPNWSNFLYDEATKTINLIDFG 466
D + N DEA + + DFG
Sbjct: 321 HGLFHGDLHAGNLYVDEAGRIV-FFDFG 347
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPHIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|Q9KVQ4|UBIB_VIBCH Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=ubiB PE=3 SV=1
Length = 544
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPHIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|A0L1M6|UBIB_SHESA Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain ANA-3) GN=ubiB PE=3 SV=1
Length = 549
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 19/241 (7%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+AEL + +S FD P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 EAELKAPIESYFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q K++ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKVI-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQT 444
+PYV ++ R++ E + GIP+ +A L + N+ + ++ +EL ++F F
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHA 286
Query: 445 D 445
D
Sbjct: 287 D 287
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 211 FLSDQNAE-----RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMP 265
+L +Q+A+ RL AL + +K GQM+S + + L P I L +++
Sbjct: 43 WLRNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRD-LFPPYIADPLAMLQDKVAPFD 101
Query: 266 RWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADS 324
Q Q+++ ELG+ ++ FD +P+A+ASI QVH A K +G V +K+ P +
Sbjct: 102 GLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQ 161
Query: 325 IESDIQNVKILLDYTNLIPKGLYLDSAMK---VARE---ELSRECDYEMEAANQKRFRDV 378
I++DI K++ ++ K L +K V RE L E D EAAN + R
Sbjct: 162 IDADI---KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRN 218
Query: 379 LSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
N++ YVP V+ D ++ V+ +E + GI + +A L N
Sbjct: 219 FENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTN 262
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A DG +V +K+ P +
Sbjct: 96 EPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPCEIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL--SQETRNYVGKKLLELTLM 434
+ YVP V+ ++++VLT E + GIP D +A L S R + K + +
Sbjct: 214 RFWEASDDIYVPEVIWSHTAEQVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYT 273
Query: 435 ELFVFRFMQTDPNWSNFLYD 454
++F F D + N D
Sbjct: 274 QVFRDNFFHADAHSGNIWVD 293
>sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0889 PE=3 SV=1
Length = 408
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 24/305 (7%)
Query: 218 ERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAEL 277
E L L + +K+GQ+LS + + L+P + AL ++ +P + +L E
Sbjct: 44 EVLTKILVELGPFYIKLGQLLSTRPD-LLPPRYINALTALQSNVPPLPWSAIEDLLQREF 102
Query: 278 GSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLD 337
+ EP+AA SIGQ+HRAV + G VA+K++ PG+ +E D +K + +
Sbjct: 103 PQPLGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAE 162
Query: 338 YTNLIPKGLYLDSAMKVARE---ELSRECDYEMEAANQKRFRDVLSNAKGF-----YVPY 389
L G D +K+A E + E +++ EAA R L+ F +P
Sbjct: 163 LLALTEFGQNYD-IVKLADEFTQTVKAELNFDTEAAYTNNLRTNLAKTTWFDPNQLVIPK 221
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQ--------ETRNYVGKKLLELTLMELFVFRF 441
V + ++++ L E + G+PI A L+Q E + + L +L+V F
Sbjct: 222 VYWELTNQKFLVLEWLDGVPI-LTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYVDGF 280
Query: 442 MQTDPNWSNFLYDEATKTINLIDFG-AARAYPKS--FVDEYLRMVVAC-ANGDRESAIEM 497
DP+ N Y A + LID G R P++ + E L +V A + +E+
Sbjct: 281 FHADPHPGNIFY-LADGRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLDAKRCAQLTVEL 339
Query: 498 SRRLG 502
S +G
Sbjct: 340 SESVG 344
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 18/305 (5%)
Query: 210 PFLSDQNAERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQL 269
P +S A +L L + +K+GQ LS + + LVP L L ++ P
Sbjct: 97 PTVSRAKAIQLRELLTNLGPTYIKVGQALSTRPD-LVPPVFLDELTTLQDQLPSFPNEVA 155
Query: 270 NQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDI 329
+ ++ ELG+ + EP+AAAS+GQV++ K G VA+K+Q P + I DI
Sbjct: 156 YRFIEEELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDI 215
Query: 330 QNVKILLDYTNLIPKGLYLDSAMKVAREELSR---ECDYEMEAANQKRFRDVLSNAKGFY 386
++ L + K L D + + E SR E +Y EA N ++F + + Y
Sbjct: 216 YIMRSLSLWARRSVKRLRSD-LVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIY 274
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQE--TRNYVGKKLLELTLMELFVFRFMQT 444
VP + + +RVLT E V GI + + + + ++ + ++ +L +L F
Sbjct: 275 VPSIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHA 334
Query: 445 DPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRM-----VVACANGDRESAIEMSR 499
DP+ N L A + +DFG S + Y R VV N D +S +
Sbjct: 335 DPHPGNLL-AMADGRLAYLDFGMM-----STIQPYQRYGLIEAVVHLVNRDFDSLAKDYV 388
Query: 500 RLGFL 504
+L FL
Sbjct: 389 KLDFL 393
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 23/277 (8%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D V +K+ P +
Sbjct: 96 EPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL--SQETRNYVGKKLLELTLM 434
+ YVP V+ +++RVLT E + GIP D +A L S R + K + +
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYT 273
Query: 435 ELFVFRFMQTDPNWSNFLYD-----EATKTINLIDFG 466
++F F D + N D ++ ++DFG
Sbjct: 274 QVFRDNFFHADAHSGNIWVDSDPARKSNPRFIVLDFG 310
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 23/277 (8%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D V +K+ P +
Sbjct: 96 EPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL--SQETRNYVGKKLLELTLM 434
+ YVP V+ +++RVLT E + GIP D +A L S R + K + +
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYT 273
Query: 435 ELFVFRFMQTDPNWSNFLYD-----EATKTINLIDFG 466
++F F D + N D ++ ++DFG
Sbjct: 274 QVFRDNFFHADAHSGNIWVDSDPARKSNPRFIVLDFG 310
>sp|Q5E8V3|UBIB_VIBF1 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1
Length = 544
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL AL + +K GQM+S + + L P + L +++ ++ E
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTRRD-LFPPHLADQLALLQDQVAPFDGQLAKDQMEME 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-GMQVAMKIQYPGVADSIESDIQNVKIL 335
LG + T FD +P+A+ASI QVH A KD G ++ +K+ P + IESDI +++
Sbjct: 113 LGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDI---RLM 169
Query: 336 LDYTNL----IPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPY 389
L IP+ L + E L E D EA+N + R ++ YVP
Sbjct: 170 YRMARLVEQHIPEARRLKPVKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLL 429
V+ D SS+ ++ +E + GI + + QL RN KLL
Sbjct: 230 VILDLSSEHLMVSERIYGIQVSDIEQLE---RNGTNMKLL 266
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 204 KQAAISPFLSDQNA---ERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAALDIVR 258
K + P D +A +R+ AL + +K GQ+LS + + L P A LA L
Sbjct: 33 KLFGLCPVRRDTSAPLPQRVRLALESLGPIFVKFGQVLSTRRDLLPPEYADELALLQ--- 89
Query: 259 QGADVMPRWQ---LNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-----GM 310
D +P + QV++ LG + FD +P+A+AS+ QVH+A + G
Sbjct: 90 ---DRVPPFDGDIARQVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGR 146
Query: 311 QVAMKIQYPGVADSIESDIQNVKILLDYT-NLIPKGLYLDSAMKVAR--EELSRECDYEM 367
+VA+K+ PG+ IE D+ ++ L + L G L VA + L E D
Sbjct: 147 EVAVKVLRPGILPVIEQDLSLMRTLAGWVEKLFADGKRLKPREVVAEFDKYLHDELDMMH 206
Query: 368 EAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VG 425
EAAN + R + VP V D SS+ VLT E + GIP+ ++ +L + + +
Sbjct: 207 EAANASQLRRNFKGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQKLS 266
Query: 426 KKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFG 466
+ +E+ ++F F D + N + I L DFG
Sbjct: 267 RFGVEIFFTQVFRHGFFHADMHPGNIFVAADGRYIAL-DFG 306
>sp|Q0HZP9|UBIB_SHESR Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain MR-7) GN=ubiB PE=3 SV=1
Length = 549
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 19/241 (7%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 EAELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q K++ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKVI-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQT 444
+PYV ++ R++ E + GIP+ +A L + N+ + ++ +EL ++F F
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHA 286
Query: 445 D 445
D
Sbjct: 287 D 287
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
Query: 210 PFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGA 261
PF+ +AE RL AL + +K GQ+LS + + LVP I L +++
Sbjct: 37 PFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRD-LVPQDIGDELVMLQDRV 95
Query: 262 DVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGV 321
+ +++ LG +S FD P+A+ASI QVH A D +V +K+ P +
Sbjct: 96 EPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVVKVLRPDI 155
Query: 322 ADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFR 376
I DI +++ L+++T+ P + VA E L+ E D + E AN R
Sbjct: 156 EHQISDDIALLKSLATLVEHTH--PNADKIRPREIVAEIETTLAAELDLQREGANASVLR 213
Query: 377 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQL--SQETRNYVGKKLLELTLM 434
+ YVP V+ +++RVLT E + GIP D +A L S R + K + +
Sbjct: 214 RFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYT 273
Query: 435 ELFVFRFMQTDPNWSNFLYD 454
++F F D + N D
Sbjct: 274 QVFRDNFFHADAHSGNIWVD 293
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 219 RLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELG 278
RL AL R+ +K GQ+LS + + L+P I L ++ P + LG
Sbjct: 52 RLRMALERLGPIFVKFGQVLSTRRD-LIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLG 110
Query: 279 SDWQSKLTSFDYEPMAAASIGQVHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDY 338
+ SFD +P+A+ASI QVH V DG +VA+K+ P V + IE+D+ +++ +
Sbjct: 111 RPIEEVFASFDADPVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADLALLRVAAAW 170
Query: 339 T-NLIPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTS 395
L P G L VA + L E D EAAN + R + +P ++ D S
Sbjct: 171 LERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLS 230
Query: 396 SKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLEL-----TLMELFVFR--FMQTDPNW 448
S VL E + G+PI ++ ET G + +L T+ VFR F D +
Sbjct: 231 SAEVLVMERMHGVPISQI-----ETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHP 285
Query: 449 SNFLYDEATKTIN---LIDFG 466
N + A T +DFG
Sbjct: 286 GNIMVSTAPATFGRYIALDFG 306
>sp|A1SAK0|UBIB_SHEAM Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiB PE=3
SV=1
Length = 549
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL A+ + +K GQMLS + + L+ L +++ + ++AE
Sbjct: 54 GERLKLAMQELGPVYIKFGQMLSTRRD-LLSDEWAQELSMLQDRVPAFDSALAREAIEAE 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQNVKIL 335
L + S FD P+A+ASI QVH A K +G QV +K+ P V +I++D++ + +
Sbjct: 113 LKAPIDSLFDDFDDTPLASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELMLQV 172
Query: 336 LDYTN-LIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVD 392
+ N L+ +G L V + + E + ++EA N + R+ ++ Y+PYV +
Sbjct: 173 ATWVNRLLGEGNRLRPVEVVEDYQNTILGELNLKLEALNATKLRNNFLDSDALYIPYVYE 232
Query: 393 DTSSKRVLTTELVSGIPIDKVAQLSQETRN--YVGKKLLELTLMELFVFRFMQTD 445
+ R++ E + GIP+ + L+ + N + ++ +EL ++F F D
Sbjct: 233 ELCHPRLMVMERIDGIPVSDIEALNAQGTNLKLLAERGVELFFTQVFRDNFFHAD 287
>sp|Q0HE99|UBIB_SHESM Probable ubiquinone biosynthesis protein UbiB OS=Shewanella sp.
(strain MR-4) GN=ubiB PE=3 SV=1
Length = 549
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 19/241 (7%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDI--- 329
+ EL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+
Sbjct: 110 ETELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLM 169
Query: 330 -QNVKILLDYTNLIPKG--LYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFY 386
Q KI+ DY L+ +G L ++ R + E + ++EA N + R+ ++ Y
Sbjct: 170 SQTAKII-DY--LLGEGNRLRPSEVIEDYRVTILGELNLKLEALNAIKLRNNFLDSDALY 226
Query: 387 VPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQT 444
+PYV ++ R++ E + GIP+ +A L + N+ + ++ +EL ++F F
Sbjct: 227 IPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHA 286
Query: 445 D 445
D
Sbjct: 287 D 287
>sp|B5FF80|UBIB_VIBFM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain MJ11) GN=ubiB PE=3 SV=1
Length = 544
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAE 276
ERL AL + +K GQM+S + + L P + L +++ ++ E
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTRRD-LFPPHLADQLALLQDQVAPFDGQLAKDQMEME 112
Query: 277 LGSDWQSKLTSFDYEPMAAASIGQVHRAVTKD-GMQVAMKIQYPGVADSIESDIQNVKIL 335
LG + T FD +P+A+ASI QVH A KD G ++ +K+ P + IESDI +++
Sbjct: 113 LGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDI---RLM 169
Query: 336 LDYTNL----IPKGLYLDSAMKVAREE--LSRECDYEMEAANQKRFRDVLSNAKGFYVPY 389
L IP+ L + E L E D EA+N + R ++ YVP
Sbjct: 170 YRMARLVEQHIPEARRLKPVEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 390 VVDDTSSKRVLTTELVSGIPIDKVAQLSQETRN 422
V+ D SS+ ++ +E + GI + + QL + N
Sbjct: 230 VILDLSSEHLMVSERIYGIQVSDIEQLEKNGTN 262
>sp|Q3BZ34|UBIB_XANC5 Probable ubiquinone biosynthesis protein UbiB OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=ubiB PE=3
SV=1
Length = 557
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 29/298 (9%)
Query: 194 IMYGTPSSQDKQAAISPFLSDQNAE--------RLAYALCRMRGAALKIGQMLSIQDESL 245
++ GTP+ + + A PF+ +AE RL AL + +K GQ+LS + + L
Sbjct: 22 LLEGTPAERWLRLA-KPFVPRASAEIAAQSRGARLRLALQELGPIFVKFGQILSTRRD-L 79
Query: 246 VPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQVHRAV 305
+PA + L +++ +++A LG SFD P+A+ASI QVH A
Sbjct: 80 IPADVAEELTLLQDRVKPFDGQAARLIVEAALGLPVSVAFASFDTVPLASASIAQVHAAT 139
Query: 306 TK---DGM--QVAMKIQYPGVADSIESDI---QNVKILLDYTNLIPKGLYLDSAMKVARE 357
+G+ +V +K+ P + I++DI ++ L++ T+ P+ + VA
Sbjct: 140 LPPDANGVRREVVVKVLRPDIERQIDADIALLHSLATLVERTH--PRADKIRPREVVAEI 197
Query: 358 E--LSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQ 415
E L+ E D + E AN R + YVP V+ +++R LT E V GIP D +A+
Sbjct: 198 EGTLAAELDLQREGANASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAK 257
Query: 416 LSQE--TRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYD-EATKTIN----LIDFG 466
L R + K + + ++F F D + N D + + +N +DFG
Sbjct: 258 LDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFG 315
>sp|A9KYL6|UBIB_SHEB9 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS195) GN=ubiB PE=3 SV=1
Length = 549
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 17/240 (7%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQTD 445
PYV ++ R++ E + GI + +A L + N+ + ++ +EL ++F F D
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHAD 287
>sp|A6WIE7|UBIB_SHEB8 Probable ubiquinone biosynthesis protein UbiB OS=Shewanella baltica
(strain OS185) GN=ubiB PE=3 SV=1
Length = 549
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 17/240 (7%)
Query: 217 AERLAYALCRMRGAALKIGQMLSIQDESLVP--APILAAL-DIVRQGADVMPRWQLNQVL 273
ERL A+ + +K+GQMLS + + L A LA L D V + R Q +
Sbjct: 54 GERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALAR----QAI 109
Query: 274 DAELGSDWQSKLTSFDYEPMAAASIGQVHRAVTK-DGMQVAMKIQYPGVADSIESDIQ-- 330
+AEL + +S F+ P+A+ASI QVH A K +G V +K+ P V I++D+Q
Sbjct: 110 EAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLM 169
Query: 331 -NVKILLDYTNLIPKGLYLDSAMKVA--REELSRECDYEMEAANQKRFRDVLSNAKGFYV 387
L++Y L+ +G L A + R + E + ++EA N + R+ ++ YV
Sbjct: 170 SQTAKLIEY--LLGEGNRLRPAEVIEDYRVTILGELNLKLEALNAVKLRNNFLDSDALYV 227
Query: 388 PYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNY--VGKKLLELTLMELFVFRFMQTD 445
PYV ++ R++ E + GI + +A L + N+ + ++ +EL ++F F D
Sbjct: 228 PYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHAD 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,695,666
Number of Sequences: 539616
Number of extensions: 8776420
Number of successful extensions: 27973
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 27472
Number of HSP's gapped (non-prelim): 230
length of query: 614
length of database: 191,569,459
effective HSP length: 124
effective length of query: 490
effective length of database: 124,657,075
effective search space: 61081966750
effective search space used: 61081966750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)