Query 007182
Match_columns 614
No_of_seqs 494 out of 2315
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 19:15:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ybx_A Phosphatidylinositol-5- 100.0 9.6E-54 3.3E-58 458.6 17.0 227 377-613 10-245 (394)
2 2gk9_A Phosphatidylinositol-4- 100.0 2E-52 6.9E-57 448.5 12.1 221 380-613 5-234 (392)
3 1h3i_A Histone H3 lysine 4 spe 99.9 5.7E-26 2E-30 235.6 16.1 131 100-253 2-139 (293)
4 1h3i_A Histone H3 lysine 4 spe 99.9 6.5E-26 2.2E-30 235.2 15.8 132 146-277 2-140 (293)
5 2f69_A Histone-lysine N-methyl 98.8 1.8E-09 6.2E-14 110.1 4.5 55 108-162 3-60 (261)
6 2f69_A Histone-lysine N-methyl 98.8 2.9E-09 9.9E-14 108.6 5.3 56 222-277 2-60 (261)
7 2aqx_A Predicted: inositol 1,4 83.3 1.8 6E-05 44.4 6.6 74 484-572 19-92 (289)
8 1w2f_A Inositol-trisphosphate 78.7 2.9 9.8E-05 42.5 6.3 72 487-572 8-79 (276)
9 2iew_A Inositol polyphosphate 75.0 3.3 0.00011 43.7 5.7 85 486-573 15-134 (363)
10 2a98_A Inositol 1,4,5-trisphos 74.3 3.5 0.00012 41.5 5.5 62 498-572 1-62 (259)
11 3ts3_A Capsid polyprotein; vir 54.9 4.6 0.00016 37.8 1.7 48 449-504 118-168 (208)
12 3hmm_A TGF-beta receptor type- 45.5 39 0.0013 33.8 7.2 74 480-558 7-83 (303)
13 3q4u_A Activin receptor type-1 44.2 62 0.0021 31.1 8.3 74 482-558 14-88 (301)
14 3g2f_A Bone morphogenetic prot 39.4 48 0.0016 32.7 6.6 73 484-558 21-94 (336)
15 3gxj_A TGF-beta receptor type- 38.7 51 0.0017 31.8 6.6 74 482-558 9-83 (303)
16 2x9a_A Attachment protein G3P; 32.2 1.8E+02 0.0063 22.8 7.4 44 106-157 13-56 (65)
17 4frf_A Inositol polyphosphate 30.7 9.8 0.00033 38.4 -0.2 78 485-572 5-89 (275)
18 3op5_A Serine/threonine-protei 27.5 2E+02 0.0068 28.8 9.1 74 484-558 43-134 (364)
19 3ll6_A Cyclin G-associated kin 27.4 84 0.0029 30.6 6.1 73 484-558 36-116 (337)
20 1b6c_B TGF-B superfamily recep 26.6 61 0.0021 32.0 4.9 75 482-559 48-123 (342)
21 3soc_A Activin receptor type-2 26.0 1.5E+02 0.005 29.2 7.6 72 484-558 32-104 (322)
22 2v62_A Serine/threonine-protei 22.1 2.5E+02 0.0084 27.8 8.5 75 483-558 44-134 (345)
23 2ww5_A LYTC autolysin, 1,4-bet 21.9 26 0.00087 38.0 1.0 94 123-226 49-144 (468)
24 2buj_A Serine/threonine-protei 21.4 1.9E+02 0.0065 27.9 7.3 71 484-559 37-113 (317)
25 1nxk_A MAP kinase-activated pr 20.8 2.5E+02 0.0084 28.8 8.4 64 484-558 70-141 (400)
No 1
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=100.00 E-value=9.6e-54 Score=458.61 Aligned_cols=227 Identities=28% Similarity=0.436 Sum_probs=193.8
Q ss_pred ccCCCceecCCcccHHHHHHHHhchhccccccccc--ccCCCCCCCCCcceeEee---cCCCCCCCCCCccccceEEEEe
Q 007182 377 VKKPGQTISKGHKNYELMLNLQLGIRYSVGKHASI--LRDLKPSDFDPKEKYWTR---FAPEGSKITPPHQSVEFRWKDY 451 (614)
Q Consensus 377 ~~~~g~~i~~gh~~~~L~~~~~~Gir~sv~~~~~~--~~~l~~~df~~~~k~~~~---f~~~gs~~t~~~~~~~f~~k~Y 451 (614)
.--.|++.+..+.++.||.+||||||++|++++++ +..|+++||++.+|+++. |+++ .+|. +|+|++|
T Consensus 10 ~~~~~~~~~~~r~~~~l~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~~---~~p~----~f~~k~Y 82 (394)
T 2ybx_A 10 GVDLGTENLYFQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKE---NMPS----HFKFKEY 82 (394)
T ss_dssp -------CCCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEEEESSSTT---TSCS----EEEEEEE
T ss_pred ccCCCCcccccccchHHHHHHHHhHHHHHhhccCCCCccccChhHhhhheEEecccccCCcc---cCCC----CeEEEEE
Confidence 34478899999999999999999999999998876 556899999999999873 4544 3443 7999999
Q ss_pred CHHHHHHHHHHcCCChhhhHHhhcCCcccccccCCCCccceeEEeeCCeEEEEecCHHHHHHHHHHHHHHHHHhh-cCCC
Q 007182 452 CPMVFRHLRELFQVDPANYMLAICGDDALRELSSPGKSGSFFYVTQDDRFMIKTVKKSEVKVLLRMLPSYYQHVC-RYEN 530 (614)
Q Consensus 452 ~P~~F~~LR~~~gi~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiIKti~k~E~~~l~~~lp~Y~~h~~-~~~~ 530 (614)
||.+|++||++|||++++|+.|||++..+. +.|+|||||+||+|.|+|||||||+++|+++|+++||+||+||. .||+
T Consensus 83 ~P~~F~~LR~~~~i~~~dy~~Sl~~~~~~~-~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~ 161 (394)
T 2ybx_A 83 CPMVFRNLRERFGIDDQDFQNSLTRSAPLP-NDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGI 161 (394)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHHHSSCCEE-CC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHhCCCHHHHHHHhcCCCccc-cCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999877654 78999999999999999999999999999999999999999995 5999
Q ss_pred ceeeeeEeEEEEEeeCCeEEEEEEEeeeccCCCceeeeEEeeccccCCCCCCCcccccCCcceeecCc---CceeccCHH
Q 007182 531 SLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSDYRIHRRFDLKGSSHGRTTDKPVEEIDETTTLKDLDL---NFVFRLQRN 607 (614)
Q Consensus 531 tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~---~~~~~~~~~ 607 (614)
|||+||||||+|+ ..++++|||||+|||++...||++||||||+++|.+.+++ ..+..+||||+|| +..+++.+.
T Consensus 162 TLL~k~~Gly~v~-~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~ 239 (394)
T 2ybx_A 162 TLLPQFLGMYRLN-VDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKE-KAKELPTLKDNDFINEGQKIYIDDN 239 (394)
T ss_dssp CSSCCEEEEEEEE-ETTEEEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHHH-HTSSSCEECHHHHHHTTCCCCCCHH
T ss_pred cChhhhcEEEEEE-ECCeEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccCcceecccchHhcCCeEEECHH
Confidence 9999999999999 5788999999999999988999999999999999998643 3356789999998 567899999
Q ss_pred HHHHhh
Q 007182 608 WYQELM 613 (614)
Q Consensus 608 ~~~~~~ 613 (614)
|++.|+
T Consensus 240 ~k~~l~ 245 (394)
T 2ybx_A 240 NKKVFL 245 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988876
No 2
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-52 Score=448.47 Aligned_cols=221 Identities=27% Similarity=0.473 Sum_probs=165.7
Q ss_pred CCceecCCcccHHHHHHHHhchhccccccccc--ccCCCCCCCCCcceeEee---cCCCCCCCCCCccccceEEEEeCHH
Q 007182 380 PGQTISKGHKNYELMLNLQLGIRYSVGKHASI--LRDLKPSDFDPKEKYWTR---FAPEGSKITPPHQSVEFRWKDYCPM 454 (614)
Q Consensus 380 ~g~~i~~gh~~~~L~~~~~~Gir~sv~~~~~~--~~~l~~~df~~~~k~~~~---f~~~gs~~t~~~~~~~f~~k~Y~P~ 454 (614)
.++.+...+.+..||.+||||||+||++++++ +..|+++||++.+|+++. |+++ .+| .+|+|++|||.
T Consensus 5 ~~~~~~~~r~~~~~~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~e---~~p----~~f~~k~Y~P~ 77 (392)
T 2gk9_A 5 VQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRE---NLP----SHFKFKEYCPQ 77 (392)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEECSSSCCS---SSC----SSBEEEEESHH
T ss_pred ceeeeeecCcchHHHHHHHHhHHHHhhcccCCCCccccChhHhhhheEEeeccccCCcc---cCC----CceEEEEECHH
Confidence 56677788889999999999999999998876 556899999999999873 4444 344 37999999999
Q ss_pred HHHHHHHHcCCChhhhHHhhcCCcccccccCCCCccceeEEeeCCeEEEEecCHHHHHHHHHHHHHHHHHhh-cCCCcee
Q 007182 455 VFRHLRELFQVDPANYMLAICGDDALRELSSPGKSGSFFYVTQDDRFMIKTVKKSEVKVLLRMLPSYYQHVC-RYENSLV 533 (614)
Q Consensus 455 ~F~~LR~~~gi~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiIKti~k~E~~~l~~~lp~Y~~h~~-~~~~tLL 533 (614)
+|++||++|||++++|+.|||++..|. |+|||| +||+|+|+|||||||+++|+++|+++||+||+||. .||+|||
T Consensus 78 ~F~~LR~~~~i~~~dy~~Sl~~~~~~~---s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL 153 (392)
T 2gk9_A 78 VFRNLRDRFGIDDQDYLVSLTRNPPSE---SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLL 153 (392)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHSSCCCC---CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTSCSSS
T ss_pred HHHHHHHHhCCCHHHHHHHhcCCCccc---CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 999999999999999999999887776 899999 99999999999999999999999999999999995 5999999
Q ss_pred eeeEeEEEEEeeCCeEEEEEEEeeeccCCCceeeeEEeeccccCCCCCCCcccccCCcceeecCc---CceeccCHHHHH
Q 007182 534 TKFYGVHCVKPIGGQKTRFIVMGNLFCSDYRIHRRFDLKGSSHGRTTDKPVEEIDETTTLKDLDL---NFVFRLQRNWYQ 610 (614)
Q Consensus 534 ~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~---~~~~~~~~~~~~ 610 (614)
+||||||+|+ ..++++|||||+|||++...||++||||||+++|.+.+++ ..++.+||||+|| +..+++.+.|++
T Consensus 154 ~k~~Gly~v~-~~~~~~~~vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k~ 231 (392)
T 2gk9_A 154 PQFLGMYRVS-VDNEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKE-KVKELPTLRDMDFLNKNQKVYIGEEEKK 231 (392)
T ss_dssp CCEEEEEECC-BSSCCCEEEEEECSSCSSSCCSCCCEECC------------------CCBTTC--CCCCCCCC----CH
T ss_pred hhhceEEEEE-ECCeEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccccceecccchhhcCCeEEECHHHHH
Confidence 9999999998 4678899999999999988999999999999999998754 3356789999999 567788888877
Q ss_pred Hhh
Q 007182 611 ELM 613 (614)
Q Consensus 611 ~~~ 613 (614)
.|+
T Consensus 232 ~l~ 234 (392)
T 2gk9_A 232 IFL 234 (392)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 3
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93 E-value=5.7e-26 Score=235.63 Aligned_cols=131 Identities=20% Similarity=0.368 Sum_probs=83.4
Q ss_pred cCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEecCCC-eEEEEEeCCeEeeEEEEEecCCCEEEEe
Q 007182 100 LPNGDLYIGSFVGNAPHGSGKYLWTDGCMYEGEWRRGKASGKGKFSWPSGA-TYEGEFKSGRMEGFGTFTGSDGDTYRGA 178 (614)
Q Consensus 100 ~~nG~~Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~nGk~~G~G~~~~~nG~-~YeG~fknG~~~G~G~~~~~nG~~Y~G~ 178 (614)
|+||++|+|+|+++++||.|+++|+||.+|+|+|++|++||.|+++|+||. +|+|+|++|++||.|++
T Consensus 2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~----------- 70 (293)
T 1h3i_A 2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWI----------- 70 (293)
T ss_dssp CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEE-----------
T ss_pred cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEE-----------
Confidence 455666666666666666666666666666666666666665555555555 45555555555555554
Q ss_pred ecCCcccccceeEEecCceeeeeec-cceeeec-EEEEEcCCC-EEEEEEECCeEe-eeeEEE--ecCCCEEEEEEeCCe
Q 007182 179 WSSDRKHGYGEKRYANGDVYEGCWK-KNLQDGQ-GRYVWKNGN-EYVGEWKNGVIS-GRGTLI--WANGNKYEGQWENGT 252 (614)
Q Consensus 179 w~~g~~~G~G~~~y~nG~~YeG~~~-~G~~~G~-G~~~~~nG~-~Y~G~fknGk~~-G~G~~~--~~nG~~yeG~w~nG~ 252 (614)
+|+||.+|+|+|+ +|+++|. |+++++||. .|+|+|++|+++ |.|+++ ++||..+.|.|.+++
T Consensus 71 ------------~~~~G~~y~G~~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~ 138 (293)
T 1h3i_A 71 ------------YYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNS 138 (293)
T ss_dssp ------------ECTTSCEEEEECCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCC
T ss_pred ------------EECCCCEEEEEEeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCc
Confidence 5555555666666 6666666 777777777 477777777777 777777 677777777776655
Q ss_pred e
Q 007182 253 P 253 (614)
Q Consensus 253 ~ 253 (614)
.
T Consensus 139 ~ 139 (293)
T 1h3i_A 139 V 139 (293)
T ss_dssp E
T ss_pred e
Confidence 5
No 4
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93 E-value=6.5e-26 Score=235.22 Aligned_cols=132 Identities=20% Similarity=0.386 Sum_probs=106.2
Q ss_pred ecCCCeEEEEEeCCeEeeEEEEEecCCCEEEEeecCCcccccceeEEecCc-eeeeeeccceeeecEEEEEcCCCEEEEE
Q 007182 146 WPSGATYEGEFKSGRMEGFGTFTGSDGDTYRGAWSSDRKHGYGEKRYANGD-VYEGCWKKNLQDGQGRYVWKNGNEYVGE 224 (614)
Q Consensus 146 ~~nG~~YeG~fknG~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~y~nG~-~YeG~~~~G~~~G~G~~~~~nG~~Y~G~ 224 (614)
|+||.+|+|+|++|++||.|+++++||.+|+|+|++|++||.|+++++||. +|+|+|++|+++|.|+++|+||.+|+|+
T Consensus 2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~ 81 (293)
T 1h3i_A 2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGE 81 (293)
T ss_dssp CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEE
Confidence 445555555555555555555555555555555555555556666667777 8999999999999999999999999999
Q ss_pred EE-CCeEeee-eEEEecCCC-EEEEEEeCCeee-eEEEEE--eCCCCEEEEEEeCCCCC
Q 007182 225 WK-NGVISGR-GTLIWANGN-KYEGQWENGTPK-GSGVFT--WPDGSCYIGTWNISSKD 277 (614)
Q Consensus 225 fk-nGk~~G~-G~~~~~nG~-~yeG~w~nG~~~-G~G~~~--~~dG~~y~G~w~~g~~~ 277 (614)
|+ +|++||. |+++++||. .|+|.|++|+++ |.|+++ ++||..+.|.|.++..-
T Consensus 82 ~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~~ 140 (293)
T 1h3i_A 82 VNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVY 140 (293)
T ss_dssp CCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCEE
T ss_pred EeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCceE
Confidence 99 9999999 999999999 699999999999 999999 89999999999877543
No 5
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.81 E-value=1.8e-09 Score=110.05 Aligned_cols=55 Identities=27% Similarity=0.448 Sum_probs=37.9
Q ss_pred EEEECCEEeeeEEEEEcCCcEEEEEEE-CCEEeee-EEEEecCCCe-EEEEEeCCeEe
Q 007182 108 GSFVGNAPHGSGKYLWTDGCMYEGEWR-RGKASGK-GKFSWPSGAT-YEGEFKSGRME 162 (614)
Q Consensus 108 G~~~~g~~hG~G~~~~~dG~~YeG~w~-nGk~~G~-G~~~~~nG~~-YeG~fknG~~~ 162 (614)
|+|++|++||.|+++|+||..|+|+|. +|.+||. |.++||||.+ |+|+|++|.+.
T Consensus 3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~~ 60 (261)
T 2f69_A 3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 60 (261)
T ss_dssp --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcEe
Confidence 778888888888888888888888888 8888888 8888888887 88888877763
No 6
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.80 E-value=2.9e-09 Score=108.57 Aligned_cols=56 Identities=16% Similarity=0.317 Sum_probs=42.9
Q ss_pred EEEEECCeEeeeeEEEecCCCEEEEEEe-CCeeeeE-EEEEeCCCCE-EEEEEeCCCCC
Q 007182 222 VGEWKNGVISGRGTLIWANGNKYEGQWE-NGTPKGS-GVFTWPDGSC-YIGTWNISSKD 277 (614)
Q Consensus 222 ~G~fknGk~~G~G~~~~~nG~~yeG~w~-nG~~~G~-G~~~~~dG~~-y~G~w~~g~~~ 277 (614)
.|+|++|++||.|+++|+||.+|+|+|. +|.+||. |+++|+||.+ |+|.|.+|..-
T Consensus 2 ~g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~~ 60 (261)
T 2f69_A 2 AMGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 60 (261)
T ss_dssp ---------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred CceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcEe
Confidence 3889999999999999999999999999 9999999 9999999998 99999888654
No 7
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=83.27 E-value=1.8 Score=44.37 Aligned_cols=74 Identities=22% Similarity=0.345 Sum_probs=51.9
Q ss_pred cCCCCccceeEEeeCCeEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeeeccCCC
Q 007182 484 SSPGKSGSFFYVTQDDRFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSDY 563 (614)
Q Consensus 484 ~s~GKSGs~F~~T~D~rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~ 563 (614)
.-.|-.|+ +...++..|+|-....|.++...+.++ .-..++|+|+|+..+ ++ ..||+|+||.+. .
T Consensus 19 QvaGH~g~--~~~~~~G~i~Kp~~~~E~~fYe~l~~~-------~L~~fvP~y~G~~~~---~~--~~~i~LEDLt~g-f 83 (289)
T 2aqx_A 19 QLAGHAGS--FKAAANGRILKKHCESEQRCLDRLMAD-------VLRPFVPAYHGDVVK---DG--ERYNQMDDLLAD-F 83 (289)
T ss_dssp CCSSCTTS--EEECSTTEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEE---TT--EEEEEEECTTTT-C
T ss_pred EeeCCCCc--ceECCCCEEEeeCcHHHHHHHHHHhhh-------hhHHhCchheEeecc---CC--ceEEEehhhhcC-C
Confidence 34577775 333445568999999999998887643 224689999998654 33 369999999763 2
Q ss_pred ceeeeEEee
Q 007182 564 RIHRRFDLK 572 (614)
Q Consensus 564 ~i~~~yDLK 572 (614)
.---+=|||
T Consensus 84 ~~PcVmDiK 92 (289)
T 2aqx_A 84 DSPCVMDCK 92 (289)
T ss_dssp SSCEEEEEE
T ss_pred CCceEEEEe
Confidence 334577888
No 8
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=78.67 E-value=2.9 Score=42.51 Aligned_cols=72 Identities=22% Similarity=0.339 Sum_probs=50.3
Q ss_pred CCccceeEEeeCCeEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeeeccCCCcee
Q 007182 487 GKSGSFFYVTQDDRFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSDYRIH 566 (614)
Q Consensus 487 GKSGs~F~~T~D~rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~ 566 (614)
|-.|.+... .|+..|+|-.+..|.++...+.++ . -..++|+|+|+..+ ++ ..||+|+||.+. ..--
T Consensus 8 GH~g~l~~~-~~~g~i~Kp~~~~E~~fY~~l~~~---~----L~~fvP~y~G~~~~---~~--~~~i~LEdLt~g-f~~P 73 (276)
T 1w2f_A 8 GHTGSFKAA-GTSGLILKRCSEPERYCLARLMAD---A----LRGCVPAFHGVVER---DG--ESYLQLQDLLDG-FDGP 73 (276)
T ss_dssp TCCSCCEEC-SSTTEEEEECCHHHHHHHHHHHTS---G----GGGGSCCEEEEEEE---TT--EEEEEEECTTTT-CSSC
T ss_pred CCCCceeec-CCCCEEEeeCCHHHHHHHHHhhhh---h----HHHhChhhheeecc---CC--ceEEEechHhcC-CCCc
Confidence 555643322 267789999999999999987642 2 23678999998554 33 379999999763 2333
Q ss_pred eeEEee
Q 007182 567 RRFDLK 572 (614)
Q Consensus 567 ~~yDLK 572 (614)
.+=|||
T Consensus 74 cVmDiK 79 (276)
T 1w2f_A 74 CVLDCK 79 (276)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 477888
No 9
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=75.03 E-value=3.3 Score=43.65 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=47.1
Q ss_pred CCCccceeEEeeCCeEEEEecCHHHHHHHHHHHHHHH------HHhhcCCCceeeeeEeEEEEEeeC-------------
Q 007182 486 PGKSGSFFYVTQDDRFMIKTVKKSEVKVLLRMLPSYY------QHVCRYENSLVTKFYGVHCVKPIG------------- 546 (614)
Q Consensus 486 ~GKSGs~F~~T~D~rfiIKti~k~E~~~l~~~lp~Y~------~h~~~~~~tLL~k~~Gl~~i~~~~------------- 546 (614)
.|-.| ++...|+.+|+|-....|+.|...+...=+ ..+...-..++|+|+|+..+....
T Consensus 15 aGH~g--~l~~~dg~~i~Kp~~~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~~~~~~~~~~~~~~~~~~ 92 (363)
T 2iew_A 15 AGHDG--TLTDGDGLLIFKPAFPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNEGAKIEQSGDAALLKIDE 92 (363)
T ss_dssp -------------CCEEEEECCHHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC-----------------
T ss_pred cCCcc--eeEcCCCCEEeCcCChHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEecccccccccchhhccccc
Confidence 46666 344468999999999999999987754200 001111246889999998875211
Q ss_pred ---------------Ce-EEEEEEEeeeccCCCceeeeEEeec
Q 007182 547 ---------------GQ-KTRFIVMGNLFCSDYRIHRRFDLKG 573 (614)
Q Consensus 547 ---------------~~-~~~fvVM~Nlf~~~~~i~~~yDLKG 573 (614)
+. ...||||+||-+. ..--.+=|||=
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~g-f~~PcVlDiKm 134 (363)
T 2iew_A 93 RLSDSTDNLDSIPVKSEKSKQYLVLENLLYG-FSKPNILDIKL 134 (363)
T ss_dssp ------------------CCEEEEEECTTTT-CSSEEEEEEEE
T ss_pred ccccCccchhcccccCCCCccEEEechhhcC-CCCceEEEEEE
Confidence 11 3479999999763 34456778883
No 10
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=74.32 E-value=3.5 Score=41.47 Aligned_cols=62 Identities=21% Similarity=0.303 Sum_probs=45.8
Q ss_pred CCeEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeeeccCCCceeeeEEee
Q 007182 498 DDRFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSDYRIHRRFDLK 572 (614)
Q Consensus 498 D~rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLK 572 (614)
|+..|+|-.+..|.++...+.+. .-..++|+|+|+... ++ ..||+|+||.+.- .---+=|||
T Consensus 1 ~~g~i~K~~~~~E~~fY~~l~~~-------~L~~fvP~y~G~~~~---~~--~~~i~LEdLt~g~-~~PcVmDiK 62 (259)
T 2a98_A 1 EDGRILKRFCQCEQRSLEQLMKD-------PLRPFVPAYYGMVLQ---DG--QTFNQMEDLLADF-EGPSIMDCK 62 (259)
T ss_dssp CCSEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEE---TT--EEEEEEECTTTTC-SSCEEEEEE
T ss_pred CCCEEeccCCHHHHHHHHHhhhh-------hHHHhCcCceEEEEE---CC--ceEEEeehHhcCC-CCceEEEEE
Confidence 45689999999999999887642 234689999998653 33 3799999997632 333477888
No 11
>3ts3_A Capsid polyprotein; virus protein, projection domain, astrovirus capsid, viral P; 1.49A {Turkey astrovirus 2}
Probab=54.90 E-value=4.6 Score=37.77 Aligned_cols=48 Identities=17% Similarity=0.520 Sum_probs=34.3
Q ss_pred EEeCHHHH---HHHHHHcCCChhhhHHhhcCCcccccccCCCCccceeEEeeCCeEEEE
Q 007182 449 KDYCPMVF---RHLRELFQVDPANYMLAICGDDALRELSSPGKSGSFFYVTQDDRFMIK 504 (614)
Q Consensus 449 k~Y~P~~F---~~LR~~~gi~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiIK 504 (614)
+.|.|-.= +.|..+.++.+-|=..|+. -+.|+-+++||.|.|+||||=
T Consensus 118 kkyyP~Ttn~dq~lk~r~nl~egDpvismg--------dt~Grraalfyrtsder~ill 168 (208)
T 3ts3_A 118 QKYYPGTTNLDEQLKQRLNLAEGDPVISMG--------DTNGRRAALFYRTSDEKYILF 168 (208)
T ss_dssp EEBCGGGCCSCHHHHHHHCCCTTCEEEEEE--------ETTCCEEEEEEETTTTEEEEE
T ss_pred hhcCCCccchhhhhhhhhccccCCceeeec--------ccCCceeeeeeeccCceEEEE
Confidence 45555322 3477777777766666665 245889999999999999985
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=45.47 E-value=39 Score=33.80 Aligned_cols=74 Identities=18% Similarity=0.185 Sum_probs=45.7
Q ss_pred cccccCCCCccceeEEeeCCe-EEEEecCHHHHHHHHHHHHHHHHHh--hcCCCceeeeeEeEEEEEeeCCeEEEEEEEe
Q 007182 480 LRELSSPGKSGSFFYVTQDDR-FMIKTVKKSEVKVLLRMLPSYYQHV--CRYENSLVTKFYGVHCVKPIGGQKTRFIVMG 556 (614)
Q Consensus 480 l~~~~s~GKSGs~F~~T~D~r-fiIKti~k~E~~~l~~~lp~Y~~h~--~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~ 556 (614)
|.+....|..|..|--..+++ +-||.++..+.+.+..-.. ..-+ .+||| |++++|.+.-. .......+|||+
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~E--i~~~~~l~HpN--Iv~l~g~~~~~-~~~~~~~~lV~E 81 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAE--IYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSD 81 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTT--BCCEEEEEEEE-CSSSEEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHH--HHHHhcCCCCC--CCcEEEEEEec-CCCceEEEEEec
Confidence 444445588888887666665 5689998876555442211 1111 25666 78999987654 333455689998
Q ss_pred ee
Q 007182 557 NL 558 (614)
Q Consensus 557 Nl 558 (614)
-+
T Consensus 82 y~ 83 (303)
T 3hmm_A 82 YH 83 (303)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 13
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=44.24 E-value=62 Score=31.13 Aligned_cols=74 Identities=15% Similarity=0.189 Sum_probs=45.5
Q ss_pred cccCCCCccceeEEeeCC-eEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeee
Q 007182 482 ELSSPGKSGSFFYVTQDD-RFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNL 558 (614)
Q Consensus 482 ~~~s~GKSGs~F~~T~D~-rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 558 (614)
+....|..|..|--+.++ .+.||.++..+...+..-..-+-.-...||| ++++++.+... .......++||+-+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--iv~~~~~~~~~-~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN--ILGFIASDMTS-RHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTT--BCCEEEEEEEE-ETTEEEEEEEECCC
T ss_pred EeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcC--eeeEEEeeccc-cCCCceeEEehhhc
Confidence 334457778877766554 4788999887655554332222222235565 67888876654 44556678898854
No 14
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=39.37 E-value=48 Score=32.71 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=45.4
Q ss_pred cCCCCccceeEEeeC-CeEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeee
Q 007182 484 SSPGKSGSFFYVTQD-DRFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNL 558 (614)
Q Consensus 484 ~s~GKSGs~F~~T~D-~rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 558 (614)
...|..|.+|--+.+ ..+.||.++......+.....-+......+|+ ++++++.+......+...+++||+-+
T Consensus 21 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDN--IARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTT--BCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred cccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcc--hhhheecccccccCCCceEEEEEecC
Confidence 345777777765554 45778999876555444322211111234444 67888877766566777789999975
No 15
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=38.68 E-value=51 Score=31.76 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=41.6
Q ss_pred cccCCCCccceeEEee-CCeEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeee
Q 007182 482 ELSSPGKSGSFFYVTQ-DDRFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNL 558 (614)
Q Consensus 482 ~~~s~GKSGs~F~~T~-D~rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 558 (614)
+....|..|..|--.. ...+.||.+++.+...+.+-..-+-.-...|| -|+++++.+... .......++||+.+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~--~i~~~~~~~~~~-~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHE--NILGFIAADNKD-NGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC---CBCCEEEEEEEE-CSSSEEEEEEEECC
T ss_pred hhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCc--ceeeeeeecccC-CCccceeEEEEecc
Confidence 3344577777765444 44688999998766554432221111113444 467888887665 33334668888865
No 16
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=32.17 E-value=1.8e+02 Score=22.76 Aligned_cols=44 Identities=23% Similarity=0.496 Sum_probs=32.4
Q ss_pred EEEEEECCEEeeeEEEEEcCCcEEEEEEECCEEeeeEEEEecCCCeEEEEEe
Q 007182 106 YIGSFVGNAPHGSGKYLWTDGCMYEGEWRRGKASGKGKFSWPSGATYEGEFK 157 (614)
Q Consensus 106 Y~G~~~~g~~hG~G~~~~~dG~~YeG~w~nGk~~G~G~~~~~nG~~YeG~fk 157 (614)
.+|.+.|-.+.+.+.|..-+||+|+ ..|.++-. .+|.+--+.|+
T Consensus 13 ~~gs~snv~k~d~~~Yan~egC~Y~-------atGViVg~-~dgtv~a~~W~ 56 (65)
T 2x9a_A 13 FDGTLSNVWKEGDSRYANFENCIYE-------LSGIGIGY-DNDTSWNGHWT 56 (65)
T ss_dssp EEEEEESCEEETTEEEEEETTEEEE-------EEEEEEEE-TTTTEEEEEEE
T ss_pred ccccccceeecCCceEEEecCeEEE-------eeeEEEEC-CCCCEEeccee
Confidence 4677777777788888888999998 45554443 67777777775
No 17
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=30.71 E-value=9.8 Score=38.42 Aligned_cols=78 Identities=22% Similarity=0.398 Sum_probs=29.3
Q ss_pred CCCCccceeEEeeCCeEEEEecCH-----HHHHHHHHHHHHH--HHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEee
Q 007182 485 SPGKSGSFFYVTQDDRFMIKTVKK-----SEVKVLLRMLPSY--YQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGN 557 (614)
Q Consensus 485 s~GKSGs~F~~T~D~rfiIKti~k-----~E~~~l~~~lp~Y--~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 557 (614)
..|+.|.+. ..++ .|+|=+.. .|++|-.++..+- -.+| ..++|+|+|...+. ......||||+|
T Consensus 5 ~~Gh~G~l~--~~~G-~v~KP~~~~~rg~~E~~FYe~l~~~~~~~~~L----~~fvP~y~G~~~~~--~~~~~~~i~LEd 75 (275)
T 4frf_A 5 KDGKPGPLV--DDKG-RFFKPLQGDSRGEIEVKFYESFSSNTEVPEHI----HRYFPVYHGTQAVE--GSDGAAMMVLEN 75 (275)
T ss_dssp ----------------------------CCHHHHHHHHHHCTTSCHHH----HTTSCCBCCC------------CCCBCC
T ss_pred CCCCCCceE--CCCC-cEEeecCCCCcchHHHHHHHHHhhCCCchHHH----HhhCcCCceeEEec--CCCCccEEEEee
Confidence 357777542 3444 57898765 5888877653210 0001 13589999987775 333456899999
Q ss_pred eccCCCceeeeEEee
Q 007182 558 LFCSDYRIHRRFDLK 572 (614)
Q Consensus 558 lf~~~~~i~~~yDLK 572 (614)
|-.. ..--.+=|||
T Consensus 76 Lt~g-f~~PcVlDiK 89 (275)
T 4frf_A 76 LLAE-YTKPSVMDVK 89 (275)
T ss_dssp GGGG-CSSEEEEEEE
T ss_pred cccc-cCCCceeEee
Confidence 9753 2334466887
No 18
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=27.55 E-value=2e+02 Score=28.77 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=45.4
Q ss_pred cCCCCccceeEEee--------CCeEEEEecCHH------HHHHHHHHHHH----HHHHhhcCCCceeeeeEeEEEEEee
Q 007182 484 SSPGKSGSFFYVTQ--------DDRFMIKTVKKS------EVKVLLRMLPS----YYQHVCRYENSLVTKFYGVHCVKPI 545 (614)
Q Consensus 484 ~s~GKSGs~F~~T~--------D~rfiIKti~k~------E~~~l~~~lp~----Y~~h~~~~~~tLL~k~~Gl~~i~~~ 545 (614)
...|..|.+|--.. +..+.||.++.. |++++.++... -+..+..-.+--+++++|.+... .
T Consensus 43 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-~ 121 (364)
T 3op5_A 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD-K 121 (364)
T ss_dssp CCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE-E
T ss_pred EecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec-c
Confidence 44577777776644 357899998753 45555543221 11222333344578999987765 5
Q ss_pred CCeEEEEEEEeee
Q 007182 546 GGQKTRFIVMGNL 558 (614)
Q Consensus 546 ~~~~~~fvVM~Nl 558 (614)
.+....++||+.+
T Consensus 122 ~~~~~~~lv~e~~ 134 (364)
T 3op5_A 122 NGKSYRFMIMDRF 134 (364)
T ss_dssp TTEEEEEEEEECE
T ss_pred CCcceEEEEEeCC
Confidence 6677889999976
No 19
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=27.40 E-value=84 Score=30.63 Aligned_cols=73 Identities=10% Similarity=0.147 Sum_probs=43.9
Q ss_pred cCCCCccceeEEee---CCeEEEEecCHHHHHHHHHHHHHH--HHHhhcCCCceeeeeEeEEEEEee---CCeEEEEEEE
Q 007182 484 SSPGKSGSFFYVTQ---DDRFMIKTVKKSEVKVLLRMLPSY--YQHVCRYENSLVTKFYGVHCVKPI---GGQKTRFIVM 555 (614)
Q Consensus 484 ~s~GKSGs~F~~T~---D~rfiIKti~k~E~~~l~~~lp~Y--~~h~~~~~~tLL~k~~Gl~~i~~~---~~~~~~fvVM 555 (614)
...|..|.+|-... ...+.||.+.+.+......++... ...+..||+ |+++++++.+... ......+|||
T Consensus 36 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~--iv~~~~~~~~~~~~~~~~~~~~~lv~ 113 (337)
T 3ll6_A 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN--IVQFCSAASIGKEESDTGQAEFLLLT 113 (337)
T ss_dssp EECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTT--BCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred EccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCC--hhhccccccccccccccCCceEEEEE
Confidence 34577777777653 457999998554333333333332 223334554 6789998876522 3466788898
Q ss_pred eee
Q 007182 556 GNL 558 (614)
Q Consensus 556 ~Nl 558 (614)
+-+
T Consensus 114 e~~ 116 (337)
T 3ll6_A 114 ELC 116 (337)
T ss_dssp ECC
T ss_pred Eec
Confidence 865
No 20
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=26.56 E-value=61 Score=31.96 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=43.6
Q ss_pred cccCCCCccceeEEeeCC-eEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeeec
Q 007182 482 ELSSPGKSGSFFYVTQDD-RFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLF 559 (614)
Q Consensus 482 ~~~s~GKSGs~F~~T~D~-rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf 559 (614)
+....|..|..|--..++ .++||.+++.+...+.+-..-+-.-...+|+ |+++++.+... .......++||+.+-
T Consensus 48 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--i~~~~~~~~~~-~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTT--BCCEEEEEECC-CSSCCCEEEEECCCT
T ss_pred eeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCc--EEEEEeeeccc-CCccceeEEEEeecC
Confidence 334457778877766544 5788999887655544322222211134565 67888876543 122235688998653
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=25.96 E-value=1.5e+02 Score=29.17 Aligned_cols=72 Identities=7% Similarity=0.060 Sum_probs=42.6
Q ss_pred cCCCCccceeEEeeCC-eEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEeee
Q 007182 484 SSPGKSGSFFYVTQDD-RFMIKTVKKSEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGNL 558 (614)
Q Consensus 484 ~s~GKSGs~F~~T~D~-rfiIKti~k~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 558 (614)
...|..|.+|--...+ .+.||.++..+......... ..-+..-.+.-|++++|++... .......++||+-+
T Consensus 32 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E--~~~l~~l~hpniv~~~~~~~~~-~~~~~~~~lv~e~~ 104 (322)
T 3soc_A 32 KARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGAEKRG-TSVDVDLWLITAFH 104 (322)
T ss_dssp EECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTTBCCEEEEEEEE-CSSSEEEEEEEECC
T ss_pred ecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHH--HHHHhcCCCCCchhhcceeccC-CCCCceEEEEEecC
Confidence 3457778877766544 57889998765444332221 1122222233488999987765 33345568899865
No 22
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=22.10 E-value=2.5e+02 Score=27.80 Aligned_cols=75 Identities=24% Similarity=0.346 Sum_probs=42.0
Q ss_pred ccCCCCccceeEEee------CCeEEEEecCH------HHHHHHHHHH----HHHHHHhhcCCCceeeeeEeEEEEEeeC
Q 007182 483 LSSPGKSGSFFYVTQ------DDRFMIKTVKK------SEVKVLLRML----PSYYQHVCRYENSLVTKFYGVHCVKPIG 546 (614)
Q Consensus 483 ~~s~GKSGs~F~~T~------D~rfiIKti~k------~E~~~l~~~l----p~Y~~h~~~~~~tLL~k~~Gl~~i~~~~ 546 (614)
....|..|.+|-... ...++||.+.+ .|.+++.++. -.-+..+..-.+.-+++++|.+... ..
T Consensus 44 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~-~~ 122 (345)
T 2v62_A 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE-FK 122 (345)
T ss_dssp EC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE-SS
T ss_pred eEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc-cC
Confidence 344566777766543 45789998865 3555555432 1222333333444578999988775 34
Q ss_pred CeEEEEEEEeee
Q 007182 547 GQKTRFIVMGNL 558 (614)
Q Consensus 547 ~~~~~fvVM~Nl 558 (614)
+....++||+.+
T Consensus 123 ~~~~~~lv~e~~ 134 (345)
T 2v62_A 123 GRSYRFMVMERL 134 (345)
T ss_dssp SCEEEEEEEECE
T ss_pred CCcEEEEEEecc
Confidence 556778999986
No 23
>2ww5_A LYTC autolysin, 1,4-beta-N-acetylmuramidase; hydrolase, glycosidase, choline-binding protein; 1.61A {Streptococcus pneumoniae} PDB: 2wwd_A* 2wwc_A
Probab=21.93 E-value=26 Score=37.95 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=44.9
Q ss_pred EcCCcEEEEEEECCEEeeeEEEEecCCCeEEEEEeCCeEeeEEEEEecCCCEEEEeecCCcccccceeEEe--cCceeee
Q 007182 123 WTDGCMYEGEWRRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFTGSDGDTYRGAWSSDRKHGYGEKRYA--NGDVYEG 200 (614)
Q Consensus 123 ~~dG~~YeG~w~nGk~~G~G~~~~~nG~~YeG~fknG~~~G~G~~~~~nG~~Y~G~w~~g~~~G~G~~~y~--nG~~YeG 200 (614)
-.||.+-.+.|......|.=-+.-++|....|.|.+ --+..++|....|.|..+.. .|..+|. +|.....
T Consensus 49 ~~~G~~~~~~w~~~~~~g~wyY~~~~G~~~~~~w~~------~Yy~~~~G~m~~g~W~~~~~--~~~wyY~~~~G~~~~~ 120 (468)
T 2ww5_A 49 KDDGSKAQSEWIFDNYYKAWFYINSDGRYSQNEWHG------NYYLKSGGYMAQNEWIYDSN--YKSWFYLKSDGAYAHQ 120 (468)
T ss_dssp CSSSCBCCSEEEEETTTTEEEEECTTSBBCCSEEET------TEEECGGGCBCCSEEEEETT--TTEEEEECTTSCBCCS
T ss_pred CCCCCEeeeeEEEECCCCcEEEEcCCCCEeEccccc------eEEECCCCCEEeCeEEEeCC--CCcEEEECCCCCEeEC
Confidence 367877777775322223333444577766666642 13344666666666654321 1333333 3433333
Q ss_pred eeccceeeecEEEEEcCCCEEEEEEE
Q 007182 201 CWKKNLQDGQGRYVWKNGNEYVGEWK 226 (614)
Q Consensus 201 ~~~~G~~~G~G~~~~~nG~~Y~G~fk 226 (614)
.|+ +..|.--|.-++|....|.|.
T Consensus 121 gw~--~i~g~wYyf~~~G~m~tg~w~ 144 (468)
T 2ww5_A 121 EWQ--LIGNKWYYFKKWGYMAKSQWQ 144 (468)
T ss_dssp EEE--EETTEEEEECGGGCBCCSEEE
T ss_pred CeE--ecCCEEEEECCCCCEeEccee
Confidence 343 123332233345555555554
No 24
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=21.36 E-value=1.9e+02 Score=27.94 Aligned_cols=71 Identities=8% Similarity=0.058 Sum_probs=39.7
Q ss_pred cCCCCccceeEEee---CCeEEEEecCH---HHHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEEee
Q 007182 484 SSPGKSGSFFYVTQ---DDRFMIKTVKK---SEVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVMGN 557 (614)
Q Consensus 484 ~s~GKSGs~F~~T~---D~rfiIKti~k---~E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 557 (614)
...|..|.+|.... +..++||.+.. .+.+.+.+-+. ....+ .+|+ |+++++.+... .......++||+-
T Consensus 37 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l-~h~~--iv~~~~~~~~~-~~~~~~~~lv~e~ 111 (317)
T 2buj_A 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD-MHRLF-NHPN--ILRLVAYCLRE-RGAKHEAWLLLPF 111 (317)
T ss_dssp EEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHH-HHHTC-CCTT--BCCCCEEEEEE-ETTEEEEEEEEEC
T ss_pred ecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHH-HHhhc-CCCC--eeeEEEEEEec-cCCCceeEEEEEe
Confidence 34577777776552 45688998843 33333332211 11111 4554 78999987654 4556677888886
Q ss_pred ec
Q 007182 558 LF 559 (614)
Q Consensus 558 lf 559 (614)
+-
T Consensus 112 ~~ 113 (317)
T 2buj_A 112 FK 113 (317)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 25
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=20.84 E-value=2.5e+02 Score=28.82 Aligned_cols=64 Identities=20% Similarity=0.340 Sum_probs=40.1
Q ss_pred cCCCCccceeEEee---CCeEEEEecCHH-----HHHHHHHHHHHHHHHhhcCCCceeeeeEeEEEEEeeCCeEEEEEEE
Q 007182 484 SSPGKSGSFFYVTQ---DDRFMIKTVKKS-----EVKVLLRMLPSYYQHVCRYENSLVTKFYGVHCVKPIGGQKTRFIVM 555 (614)
Q Consensus 484 ~s~GKSGs~F~~T~---D~rfiIKti~k~-----E~~~l~~~lp~Y~~h~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM 555 (614)
...|..|.++.... ...+.||.+.+. |++.+. .+..+|+ +++++++|... ..+....+|||
T Consensus 70 LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~--------~~~~hp~--iv~l~~~~~~~-~~~~~~~~lv~ 138 (400)
T 1nxk_A 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHW--------RASQCPH--IVRIVDVYENL-YAGRKCLLIVM 138 (400)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHH--------HHTTSTT--BCCEEEEEEEE-ETTEEEEEEEE
T ss_pred eeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHH--------HhcCCCC--cceEeEEEeec-ccCCcEEEEEE
Confidence 34477777776554 346999999642 222222 2234555 67889988764 34556678899
Q ss_pred eee
Q 007182 556 GNL 558 (614)
Q Consensus 556 ~Nl 558 (614)
+-+
T Consensus 139 E~~ 141 (400)
T 1nxk_A 139 ECL 141 (400)
T ss_dssp ECC
T ss_pred EeC
Confidence 865
Done!